BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000501
(1459 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296088359|emb|CBI36804.3| unnamed protein product [Vitis vinifera]
Length = 1732
Score = 1412 bits (3654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 806/1539 (52%), Positives = 962/1539 (62%), Gaps = 245/1539 (15%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M +SQ D+ IFSVRIVS+D+YMAPPIP DICYSS QGG V EVPVIR+YGSTP GQKTC
Sbjct: 1 MENSQDDAKIFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVR 120
LH+HRALPYLYVPC D+ Q QE D Y HA+SL +EKALK+KG+AGSKRQHVH CSLVR
Sbjct: 61 LHVHRALPYLYVPCTDLMPQSPQEADTYTHAVSLGVEKALKLKGNAGSKRQHVHGCSLVR 120
Query: 121 AKK---------------------------------GGAVFDKSLQPHESHIPFLLQFLV 147
AK GG+V DKSLQPHESHIPFLLQFL+
Sbjct: 121 AKNFYGYHSSEELFVKIYLNISYHPHDVSRAANLLLGGSVLDKSLQPHESHIPFLLQFLI 180
Query: 148 DYNLYGMGHLHLSKLKFRHPVPDAFFPRKFNYSSKQA--SADFQVIGCGSYPMHLMGHQI 205
DYNLYGMGHLHLSK+KFRHPVPD F RK NY+ +Q DF I HL
Sbjct: 181 DYNLYGMGHLHLSKMKFRHPVPDVFSSRKVNYNGQQKLEPDDFACISA-----HLQADSS 235
Query: 206 KTLSGLNIKVFLSLKEMLQWM--------------VCLIHCSATDIFASSIFLYDDCVGD 251
+ L+ V++S WM +C +T D V +
Sbjct: 236 GD-TCLSSPVWISSTIPGGWMWQFSSQLDASPGQGICSPKRQSTCELEG-----DAIVEE 289
Query: 252 IVNQRLMMYTSLSQTRSDVKMVQSLVPIWEVCSHPIYKLFNIQYIYPLVNFTTFQEEYER 311
I+NQ+ +Y+SLSQT SDVKMV+SL+PIWE EE+ER
Sbjct: 290 ILNQQFKLYSSLSQTHSDVKMVRSLIPIWE-------------------------EEFER 324
Query: 312 TGINEAVMAPDPGKPRPQDVLRTLSLGLEFENVLMEMCGEGQETVSSFGNDFEVLKSVAC 371
TG++E M PDPGKP P+DVLR+LS GLEFEN L E+C + ++
Sbjct: 325 TGMHEVAMPPDPGKPLPEDVLRSLSHGLEFENKLGELCNQAEK----------------- 367
Query: 372 ATDEENLIKLGPANYDYKDPEYLTCLKEGKILSALAPQGLVHQEKISLMPSKGKDTCPEL 431
+ K +S ++ QG + +E +PS+G+ C +
Sbjct: 368 -------------------------FNQNKNISPVS-QGSLCEEDDDAIPSEGRGMCLQQ 401
Query: 432 PFGGEIHSSEMVGAPGQKEPLIFGIDIPQATDTEALGLLKWLATSQAAEDLNSDDELLHE 491
E SE +G G K D EALGLL WLA+SQAAED+NSDDEL+ +
Sbjct: 402 LSVDERQRSENIGPSGLK-----------VADNEALGLLSWLASSQAAEDINSDDELVCQ 450
Query: 492 TILSPLLPETTIDKVLEKANTDYERESQKECQDILDSIEDEVNVDGLEERNSSTVDPSNH 551
TILSPLLP TIDKVLEKAN DYE ESQ+ECQDILDS+ED + GL+ER S + D S+
Sbjct: 451 TILSPLLPTVTIDKVLEKANMDYENESQQECQDILDSVEDLADFKGLKERASCSTDHSHS 510
Query: 552 PETSSHKKIPQIDGSSDDLYLLPCSGSSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKC 611
P+TS K IPQ+DGS DD + SGNSS+ E+KSE+ R QHQV QDT + ++K
Sbjct: 511 PQTSLEKMIPQVDGSGDDP-----NDCSGNSSETEMKSETKRFSQHQVLQDTGASFSNKH 565
Query: 612 NVKKKLWGSLPFSVSEQ---FNKDIETVSC--NISSLCVTEVKDHGATGSLVGN-ELGKS 665
+ LWGSLP + +++ FN D S + S T+ GSL+ N
Sbjct: 566 KRNQSLWGSLPLTTTQKACDFNSDYSACSMYGKLPSFSSTD-------GSLLINISKDVQ 618
Query: 666 FDALEREDADAHDIKEATAVTGGSVRDLMRRKRSYRESSECEPPRVKRVNVTGEQKNALS 725
FD R D + T T GS R+ S + E + V + +A S
Sbjct: 619 FDHCGRRDDEV-----GTEATAGS-RNFTITGHSQMNTGTKESLQPFNTEV---RDSAAS 669
Query: 726 MCEKQLEFDTLQNDECEKCP------LKGGTGISTVCKENME----------SPSPFDTK 769
M + EF + C+ P LK TG E ++ S SPF+ +
Sbjct: 670 MVD--FEFSNCKEYACKPDPSTDVQFLKFDTGDKHFVDERLKQTKASASSCLSNSPFEHE 727
Query: 770 --------KEDASVSVGDWKADNCKESKFDATSVEPRELQSDHPNNNDSNLNQGSLTGVP 821
E VGD C+E K + + ND N +Q GVP
Sbjct: 728 MVFQGTILDEFIPFFVGD-----CQEEK-----------KVWNKCYNDLNNHQEVGMGVP 771
Query: 822 TLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGD-MDKASVEHSSLKGSDIRPVL 880
T Y NDGS LY+L P FSPPS D VH+WLLHDD S + + SV H ++PVL
Sbjct: 772 THYQNDGSFLYLLTPVFSPPSADCVHRWLLHDDTDTSAEPLPVGSVSH-------VKPVL 824
Query: 881 EEMHQEADEMISTEPTPDLNGVTAIMHNEGHIAEPNACADCLQDISQISGPDGRSKPTPL 940
++ + E + ++ + + V +G+I + C +C QDISQISGP+ +SKPTPL
Sbjct: 825 DQQNHEIHDNLNAKKNAFHDKVPEKTQVKGNIMKVKKCTNCSQDISQISGPEEKSKPTPL 884
Query: 941 SQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYV 1000
SQIGF+DPAS G G+Q+TLLSIE+QAESRGDLRPDPRYD+INV+ L + D D A+E++V
Sbjct: 885 SQIGFRDPASVGGGQQVTLLSIEIQAESRGDLRPDPRYDAINVIVLLIQEDDDSALEVFV 944
Query: 1001 LLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLA 1060
L E QR L GI CKV V S+E LF FI I+CSFDPDIL+GWDIQGGSLGFLA
Sbjct: 945 LCRSNIEPCQRKLDGISGCKVLVSSEEKLLFDDFINIICSFDPDILIGWDIQGGSLGFLA 1004
Query: 1061 ERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEW 1120
ERA+HL D ML E +V +S+L ++AIIEDEW
Sbjct: 1005 ERASHLA-----------------------------DEMLPENLVDDSVLLEEAIIEDEW 1035
Query: 1121 GRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASG 1180
GRTHASG+HVGGRIVLNVWRLMRGE+KLNMYT E+VAE VLR+KIPSI RVLTKWF+SG
Sbjct: 1036 GRTHASGVHVGGRIVLNVWRLMRGEIKLNMYTAESVAEAVLRQKIPSIRNRVLTKWFSSG 1095
Query: 1181 PGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLL 1240
PGRARYR +EYV+ RAKLN EIMNQLDMINRTSELARVFGIDFFSVLSRGSQY VESM L
Sbjct: 1096 PGRARYRSIEYVIQRAKLNFEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYHVESMFL 1155
Query: 1241 RLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNL 1300
RLAHTQN+LAISPG QVA+QPAMECLPLVMEPESGFYADPVVVLDFQSLYPSM+IAYNL
Sbjct: 1156 RLAHTQNFLAISPGPQQVATQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMIIAYNL 1215
Query: 1301 CFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLE 1360
C+ TCLGK+ PSK + LGVS + PD H L DLKD++L+ PNGVMYVP K RKGVLPRLLE
Sbjct: 1216 CYSTCLGKVAPSKADVLGVSIYSPDPHALHDLKDQILLTPNGVMYVPSKARKGVLPRLLE 1275
Query: 1361 EILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
EILSTRIMVK+A+KKL PSQQ+L RIFNARQLALKLIANVTYGYTAAG+SGRMPCAELAD
Sbjct: 1276 EILSTRIMVKKAMKKLVPSQQVLQRIFNARQLALKLIANVTYGYTAAGYSGRMPCAELAD 1335
Query: 1421 SIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
SIVQCGR TLE AIS VN ++KWKAKVIYGDTD V +
Sbjct: 1336 SIVQCGRRTLENAISLVNTHDKWKAKVIYGDTDSMFVLL 1374
>gi|218200227|gb|EEC82654.1| hypothetical protein OsI_27267 [Oryza sativa Indica Group]
gi|222637649|gb|EEE67781.1| hypothetical protein OsJ_25510 [Oryza sativa Japonica Group]
Length = 1797
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/1513 (43%), Positives = 879/1513 (58%), Gaps = 162/1513 (10%)
Query: 8 SNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
S + SVRIVS+D+YMAPP+PG+D YS GG+V EVPVIR+YGSTPAGQKTCLHIHR L
Sbjct: 15 SPVLSVRIVSLDYYMAPPLPGFDFSYSHFHGGEVEEVPVIRIYGSTPAGQKTCLHIHRVL 74
Query: 68 PYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKK---- 123
P+LYVPC + + ++ + ++ + LEKAL+++ S SK++HVH C+LVRAKK
Sbjct: 75 PFLYVPCKEDLLHNVEKGNSFISGLLSDLEKALQIRSS--SKKKHVHGCTLVRAKKLYYP 132
Query: 124 -----------GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDAF 172
GAV ++ QP+ESHIP+LL FL+DYNLYGMG++H++ KFR P+PD F
Sbjct: 133 HEVSRAAAHLLDGAVLNRVFQPYESHIPYLLHFLIDYNLYGMGYVHVTDFKFRPPLPDDF 192
Query: 173 FPRKFNYSSKQASADFQVIGCGSYPMHLMGHQIKTLSGLNIKVFLSLKEMLQWMVCLI-- 230
P+ +S S + GH++ + K + + + + L
Sbjct: 193 HPKSSLHSKVDCSTE-------------SGHKVHPDNVAIRKPTIWISSTVPHSLILASS 239
Query: 231 ---HC------SATDIFASSIFLYDDCVGDIVNQRLMMYTSLSQTRSDVKMVQSLVPIWE 281
HC + T+ +S + D + I+N++ MYTSLSQ +D K+V+SL+ IWE
Sbjct: 240 ATSHCMEGTNWNVTNRHSSLMLEADSRIEGILNEKYKMYTSLSQATADSKIVRSLLSIWE 299
Query: 282 VCSHPIYKLFNIQYIYPLVNFTTFQEEYERTGINEAVMAPDPGKPRPQDVLRTLSLGLEF 341
+ E D G+P VLR+ G+++
Sbjct: 300 ELE--------------------------HLRLLEEAKPVDMGRPLRDSVLRSFLHGIKY 333
Query: 342 ENVLMEMCGEGQETVSSFGNDFEVLKSVACATDEENLIKLGPANYDYKDPEYLTCLKEGK 401
E L +C + + + E K C ++I G + D Y + +
Sbjct: 334 ETALSMLCPKEEVSYHRVPTMEESEKLEECLKSLNDII--GTITFSQND--YCSIIDSD- 388
Query: 402 ILSALAPQGLVHQEKISLMPSK-GKDTCPELPFGGEIHSSEMVGAPGQKEPLIFGIDIPQ 460
+SA Q + L PS+ G CP + SS++ + E L+
Sbjct: 389 -ISAGTQQENQITNVLCLEPSEEGNTQCPVSSSAAQRTSSQLFE---EHEKLV------- 437
Query: 461 ATDTEALGLLKWLATSQAAEDLNSDDELLHETILSPLLPETTIDKVLEKANTDYERESQK 520
D EALGLL WLA+SQAAE+ +DDEL++E ILSPL + +I LE A D++ SQ+
Sbjct: 438 --DAEALGLLSWLASSQAAEEPTTDDELVNEAILSPLFSKKSIAVALESAQLDFDGASQQ 495
Query: 521 ECQDILDSI-----EDEVNVDGLEERNSSTVDPSNHPETSSHKKIPQIDGSSDDLYLLPC 575
ECQDILDSI E++ N D + R+S + S +S IPQIDGSSD+ +P
Sbjct: 496 ECQDILDSIGPVIGEEQPN-DQMSYRSSVRLGES----SSLSNSIPQIDGSSDENKEVP- 549
Query: 576 SGSSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKCNVKKKLWGSLPFSVSEQFNKDIET 635
+ K + R+ ++ ASK + LWGSLP S+ ++
Sbjct: 550 ------QEDGKYKIDRKRAGLPSYSSPQSSSKASKRGGNELLWGSLPLSIKKR------- 596
Query: 636 VSCNISSLCVTEVKDHGATGSLVGNE--LGKSFDALEREDADAH-DIKE--ATAVTG--- 687
+++ G +G + E L SF + +++ A+ D E +++ TG
Sbjct: 597 ----------SDLNADGHSGGAMPTEKVLSASFMSGTGKNSHANPDNTERGSSSPTGEHD 646
Query: 688 ---GSVRDLMRRKRSYRESSECEPPRVKRVNVTGEQKNALSMCEKQLEFDTLQNDECEKC 744
SVRDLMRR+R S + E ++N + E+ LE + +D
Sbjct: 647 PLCDSVRDLMRRRRRSFRSEQSEVGNSGDAAYIVRKENEIVNSER-LELHDISSDLSNSE 705
Query: 745 PLKGGTGISTVCKENMESPSPFDTKKEDASVSVGDWKADNCKESKFDATSVEPRELQSDH 804
G S + P K E + ++ + SK + P Q+
Sbjct: 706 MYYSG---SEYLQMTFARKPPM--KNEVLCLEGSSAGSELPQSSKLGFADIPPFFNQTAE 760
Query: 805 PN-NNDSNLNQGS---LTGVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLL--------- 851
N N+S GS GVPT + NDGS LY+L FSPPS +V +WL
Sbjct: 761 ENKQNESFQRMGSSWDTLGVPTHFQNDGSALYLLTHAFSPPSTVAVGQWLTQQSCSVSVS 820
Query: 852 ---HDDKGASGDMDKASVEHSSLKGSDIRPVLEEMHQEADEMISTEPTPDLNGVTAIMHN 908
H + G +D+ +S+L P L + A +M T ++
Sbjct: 821 GIGHSNYGEKVSVDQEGANNSTLSPYMGGPALMD-DSPASKMALEHSITTFPDDTVMIEP 879
Query: 909 EGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAES 968
+ E AD D SQISG D + K TPLSQIGF DPAS G G+QLT++SIEV ES
Sbjct: 880 DLSNQEIKNLAD-WHDFSQISGGDEKDKLTPLSQIGFCDPASIGGGQQLTIISIEVITES 938
Query: 969 RGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSES--HQRSLVGIPDCKVFVCSK 1026
RG+LRPDPR+D+IN V+LA E+D+D+ +E++VL+ ++S +R+L G+ C V V
Sbjct: 939 RGELRPDPRFDAINAVSLAVEDDADNTIEVHVLIRGNNDSSHRRRNLDGVSGCDVNVFPG 998
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E L +H I +CS DPDI++GW+IQ GSLGFLAERAAHLGIGLL ISRTP
Sbjct: 999 ERELLNHLINAICSIDPDIIVGWEIQLGSLGFLAERAAHLGIGLLKRISRTPPHQMKHPP 1058
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
+ + E + L A+ ++ D E+ W HASG+HV GRI+LN+WRLMR EV
Sbjct: 1059 MNPVDE---SSQELPGASSADDVI--DDASENNWSHAHASGIHVDGRIILNLWRLMRAEV 1113
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
KLN Y++EAVA VLRRK+P +P ++L +WFA+G GR RYRC+EYV R+ LNLEI+NQL
Sbjct: 1114 KLNNYSLEAVANEVLRRKVPLVPTKILNRWFATGSGRGRYRCIEYVNKRSSLNLEILNQL 1173
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D++NRTSELARVFGIDFFSVLSRGSQ+RVESMLLRL HTQNYLAISPGN QVASQPAMEC
Sbjct: 1174 DLVNRTSELARVFGIDFFSVLSRGSQFRVESMLLRLVHTQNYLAISPGNQQVASQPAMEC 1233
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDL 1326
LPLVMEPES FY+DPVVVLDFQSLYPSM+IAYNLC+ TCLGK+ PSK + LGVSS+ D
Sbjct: 1234 LPLVMEPESAFYSDPVVVLDFQSLYPSMIIAYNLCYSTCLGKVFPSKSSVLGVSSYSADP 1293
Query: 1327 HVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRI 1386
+ DLK++LL+ PNGV+YV P+VRKGVLPRLLEEILSTRIMVK+A+KKL+ SQ++L RI
Sbjct: 1294 QKIADLKNQLLLTPNGVLYVQPEVRKGVLPRLLEEILSTRIMVKKAMKKLSASQKVLQRI 1353
Query: 1387 FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAK 1446
FNARQLALKLIANVTYGYTAAGFSGRMPCAE+ADSIVQCGR TLE AISFVN++ WKA+
Sbjct: 1354 FNARQLALKLIANVTYGYTAAGFSGRMPCAEIADSIVQCGRRTLETAISFVNQHPLWKAR 1413
Query: 1447 VIYGDTDRYTVCI 1459
V+YGDTD V +
Sbjct: 1414 VVYGDTDSMFVLL 1426
>gi|255542648|ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
Length = 2066
Score = 976 bits (2524), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/683 (70%), Positives = 563/683 (82%), Gaps = 13/683 (1%)
Query: 790 FDATSVEPRELQSDHPNNNDSNLNQGSLTGVPTLYLNDGSCLYMLRPPFSPPSVDSVHKW 849
F+ E + +Q+ N +SN Q ++ GVPT Y NDGS LY+L P +SPPS D V++W
Sbjct: 156 FEGDCQEKKVVQNKALPNTNSNDQQEAIMGVPTHYQNDGSLLYLLTPIYSPPSADCVYRW 215
Query: 850 LLHDDKG---ASGDMDKASVEHSSLKG----------SDIRPVLEEMHQEADEMISTEPT 896
L D++ + G + S + S + G S++R + +++ QE ++I++E
Sbjct: 216 LRCDNEDVLLSIGSPETGSHDSSRVYGDNISMELRSVSNVRLIEDQVQQEEHQIINSEFH 275
Query: 897 PDLNGVTAIMHNEGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQ 956
P+ + + +H++ + A+ NAC +C D+SQISGP+ RS+PTPLSQIGF+DPAS GAG+Q
Sbjct: 276 PNTDELQRPLHHKENNAKLNACTECSIDLSQISGPNERSRPTPLSQIGFRDPASTGAGQQ 335
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
LT+LSIEVQAESRGDLRPDPR+D+IN VALAF+ND+D VE+ VLL+ ES+ RS G+
Sbjct: 336 LTMLSIEVQAESRGDLRPDPRFDAINTVALAFQNDNDSTVEVQVLLHSNKESYARSSDGL 395
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
KV S+E+HL +HFI+I+ S DPDILMGWDIQGGSLGFLAERAAHLG+GLLN+ISR
Sbjct: 396 SVNKVLYFSEEVHLVTHFIRIIGSVDPDILMGWDIQGGSLGFLAERAAHLGMGLLNNISR 455
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
TPLE+ I A ++EIS++ I ML E +VAES L + A+IEDEWGRTHASG+HVGGRIVL
Sbjct: 456 TPLEANIGARETEISDKEILATMLDESLVAESALVEQAVIEDEWGRTHASGVHVGGRIVL 515
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
N+WRL+R EVKLN+YTVEAV E VLRRKIPSIP+RVLTKWF+SGPGRARYRC+EY+V RA
Sbjct: 516 NIWRLIRNEVKLNLYTVEAVGEAVLRRKIPSIPYRVLTKWFSSGPGRARYRCIEYMVHRA 575
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN
Sbjct: 576 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQ 635
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSM+IAYNLCFCTCLG + SK NT
Sbjct: 636 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCFCTCLGNVSSSKVNT 695
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
LGVSSF PD VL DLKDE+L+ PNGVMYVP KVRKGVLPRLLEEILSTRIMVKQA+KKL
Sbjct: 696 LGVSSFSPDPRVLGDLKDEILLTPNGVMYVPSKVRKGVLPRLLEEILSTRIMVKQAMKKL 755
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
AP+QQ+LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS
Sbjct: 756 APTQQVLHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISL 815
Query: 1437 VNENEKWKAKVIYGDTDRYTVCI 1459
VN ++KW A+VIYGDTD V +
Sbjct: 816 VNASDKWNARVIYGDTDSMFVLL 838
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 98/177 (55%), Gaps = 66/177 (37%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M S S FSVRIVSID+YMAPPIP DICYSS QGGKVNEVPV+R+YGSTPAGQKTC
Sbjct: 1 MESSLSKSRTFSVRIVSIDYYMAPPIPNIDICYSSFQGGKVNEVPVLRIYGSTPAGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVR 120
LH+HR +KG+AGS+RQHVH CSLVR
Sbjct: 61 LHVHR------------------------------------LKGNAGSRRQHVHGCSLVR 84
Query: 121 AKK------------------------------GGAVFDKSLQPHESHIPFLLQFLV 147
A+K GGA+ DKSLQPHE+HIPF+LQFL
Sbjct: 85 ARKFYGYHSSEELFFKIYLYYPHDVSRAANLLLGGAILDKSLQPHEAHIPFILQFLA 141
>gi|359487804|ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
Length = 2002
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/653 (70%), Positives = 527/653 (80%), Gaps = 8/653 (1%)
Query: 808 NDSNLNQGSLTGVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGD-MDKASV 866
ND N +Q GVPT Y NDGS LY+L P FSPPS D VH+WLLHDD S + + SV
Sbjct: 172 NDLNNHQEVGMGVPTHYQNDGSFLYLLTPVFSPPSADCVHRWLLHDDTDTSAEPLPVGSV 231
Query: 867 EHSSLKGSDIRPVLEEMHQEADEMISTEPTPDLNGVTAIMHNEGHIAEPNACADCLQDIS 926
H ++PVL++ + E + ++ + + V +G+I + C +C QDIS
Sbjct: 232 SH-------VKPVLDQQNHEIHDNLNAKKNAFHDKVPEKTQVKGNIMKVKKCTNCSQDIS 284
Query: 927 QISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVAL 986
QISGP+ +SKPTPLSQIGF+DPAS G G+Q+TLLSIE+QAESRGDLRPDPRYD+INV+ L
Sbjct: 285 QISGPEEKSKPTPLSQIGFRDPASVGGGQQVTLLSIEIQAESRGDLRPDPRYDAINVIVL 344
Query: 987 AFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDIL 1046
+ D D A+E++VL E QR L GI CKV V S+E LF FI I+CSFDPDIL
Sbjct: 345 LIQEDDDSALEVFVLCRSNIEPCQRKLDGISGCKVLVSSEEKLLFDDFINIICSFDPDIL 404
Query: 1047 MGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVA 1106
+GWDIQGGSLGFLAERA+HLGIGLLN ISRTP E+K A+ + EI E+ + D ML E +V
Sbjct: 405 IGWDIQGGSLGFLAERASHLGIGLLNKISRTPSETKTASRNFEIPEKRVADEMLPENLVD 464
Query: 1107 ESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIP 1166
+S+L ++AIIEDEWGRTHASG+HVGGRIVLNVWRLMRGE+KLNMYT E+VAE VLR+KIP
Sbjct: 465 DSVLLEEAIIEDEWGRTHASGVHVGGRIVLNVWRLMRGEIKLNMYTAESVAEAVLRQKIP 524
Query: 1167 SIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSV 1226
SI RVLTKWF+SGPGRARYR +EYV+ RAKLN EIMNQLDMINRTSELARVFGIDFFSV
Sbjct: 525 SIRNRVLTKWFSSGPGRARYRSIEYVIQRAKLNFEIMNQLDMINRTSELARVFGIDFFSV 584
Query: 1227 LSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLD 1286
LSRGSQY VESM LRLAHTQN+LAISPG QVA+QPAMECLPLVMEPESGFYADPVVVLD
Sbjct: 585 LSRGSQYHVESMFLRLAHTQNFLAISPGPQQVATQPAMECLPLVMEPESGFYADPVVVLD 644
Query: 1287 FQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYV 1346
FQSLYPSM+IAYNLC+ TCLGK+ PSK + LGVS + PD H L DLKD++L+ PNGVMYV
Sbjct: 645 FQSLYPSMIIAYNLCYSTCLGKVAPSKADVLGVSIYSPDPHALHDLKDQILLTPNGVMYV 704
Query: 1347 PPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTA 1406
P K RKGVLPRLLEEILSTRIMVK+A+KKL PSQQ+L RIFNARQLALKLIANVTYGYTA
Sbjct: 705 PSKARKGVLPRLLEEILSTRIMVKKAMKKLVPSQQVLQRIFNARQLALKLIANVTYGYTA 764
Query: 1407 AGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
AG+SGRMPCAELADSIVQCGR TLE AIS VN ++KWKAKVIYGDTD V +
Sbjct: 765 AGYSGRMPCAELADSIVQCGRRTLENAISLVNTHDKWKAKVIYGDTDSMFVLL 817
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 98/177 (55%), Gaps = 66/177 (37%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M +SQ D+ IFSVRIVS+D+YMAPPIP DICYSS QGG V EVPVIR+YGSTP GQKTC
Sbjct: 1 MENSQDDAKIFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVR 120
LH+HR +KG+AGSKRQHVH CSLVR
Sbjct: 61 LHVHR------------------------------------LKGNAGSKRQHVHGCSLVR 84
Query: 121 AKK------------------------------GGAVFDKSLQPHESHIPFLLQFLV 147
AK GG+V DKSLQPHESHIPFLLQFL
Sbjct: 85 AKNFYGYHSSEELFVKIYLYHPHDVSRAANLLLGGSVLDKSLQPHESHIPFLLQFLA 141
>gi|356504040|ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
Length = 2793
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/653 (67%), Positives = 514/653 (78%), Gaps = 16/653 (2%)
Query: 812 LNQGSLTGVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSSL 871
L V T Y NDGS LY+L P PPSV +VH+WLL + +G D +
Sbjct: 950 LTSNGTKSVSTHYQNDGSHLYLLTPNILPPSVGTVHRWLLCNKRGNIPDHTHQETDAEDK 1009
Query: 872 K----GSDIRPVLE-EMHQEADEMISTEPTPDLNGVTAIMHNEGHIAEPNACADCLQDIS 926
S+ P L +++Q++D TE P NG EG AC D QDIS
Sbjct: 1010 DVPKCASETEPPLRPKLYQDSD----TENKPPCNG-------EGQTERVKACLDDSQDIS 1058
Query: 927 QISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVAL 986
QIS PD +S TPLSQIGF+DPAS G G+QLTLLSIE+ AE RGDL PDP++D+IN+VAL
Sbjct: 1059 QISDPDRKSSFTPLSQIGFRDPASVGCGQQLTLLSIEILAECRGDLLPDPQFDAINIVAL 1118
Query: 987 AFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDIL 1046
F+ND D VE+ VLL+ K QRS G+ CK+ V + E L FIKI+ S DPDIL
Sbjct: 1119 GFQNDGDSIVEVLVLLHSKYVPCQRSFDGLFGCKILVFTDEKLLLKEFIKIVSSSDPDIL 1178
Query: 1047 MGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVA 1106
MGWDIQG SLGFLAERA+HLG+GLLN++SRTP ES IA+ DS+ E+ I + + +
Sbjct: 1179 MGWDIQGSSLGFLAERASHLGLGLLNNVSRTPSESLIASEDSKTYEKDILELDIHDTPSR 1238
Query: 1107 ESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIP 1166
+ + +++IIEDEWGRTHASG+H+GGRIVLN WRL+RGEVKLN+Y+VEAVAE+VLRRKIP
Sbjct: 1239 DCCVPENSIIEDEWGRTHASGVHIGGRIVLNAWRLIRGEVKLNLYSVEAVAESVLRRKIP 1298
Query: 1167 SIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSV 1226
S +VLTKWF+SGPGRARYRC++YV+ RAKLNLEI+NQLDM+NRTSELARVFGI+FFSV
Sbjct: 1299 SFHHKVLTKWFSSGPGRARYRCIKYVIERAKLNLEIINQLDMVNRTSELARVFGIEFFSV 1358
Query: 1227 LSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLD 1286
LSRGSQYRVESM LRLAHTQNYLAISPG QVASQPAMECLPLVMEPESGFY+DPVVVLD
Sbjct: 1359 LSRGSQYRVESMFLRLAHTQNYLAISPGKQQVASQPAMECLPLVMEPESGFYSDPVVVLD 1418
Query: 1287 FQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYV 1346
FQSLYPSM+IAYNLCFCTCLGK++ SK NTLGVSSF P+ HVL+DLKD++L+ PNGVM+V
Sbjct: 1419 FQSLYPSMIIAYNLCFCTCLGKVVASKANTLGVSSFSPEQHVLQDLKDQILLTPNGVMFV 1478
Query: 1347 PPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTA 1406
P KVR+G+LPRLLEEIL+TRIMVKQAIKKLAP +++L RIFNARQLALKLIANVTYGYTA
Sbjct: 1479 PSKVRRGILPRLLEEILTTRIMVKQAIKKLAPPEKVLQRIFNARQLALKLIANVTYGYTA 1538
Query: 1407 AGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
AGFSGRMPCAELADSIVQCGRSTLEKAISFVN +EKW AKVIYGDTD V +
Sbjct: 1539 AGFSGRMPCAELADSIVQCGRSTLEKAISFVNLHEKWNAKVIYGDTDSMFVLL 1591
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 318/785 (40%), Positives = 409/785 (52%), Gaps = 171/785 (21%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M+DSQ +S IFS+RIV+ID+YMAPPIP DICYSS GGKVNEVPVIRVYG TPAGQKTC
Sbjct: 1 MSDSQSNSEIFSIRIVTIDYYMAPPIPDADICYSSFHGGKVNEVPVIRVYGPTPAGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVR 120
LHIHR +KG+AGS RQHVH CSLVR
Sbjct: 61 LHIHR------------------------------------LKGNAGSSRQHVHGCSLVR 84
Query: 121 AKK------------------------------GGAVFDKSLQPHESHIPFLLQFLVDYN 150
A+K GAV DKSLQP+ESHIPF+LQFLVDYN
Sbjct: 85 ARKFYGYHSLEELFVKIYLYYPQDVSRAANLLLAGAVLDKSLQPYESHIPFILQFLVDYN 144
Query: 151 LYGMGHLHLSKLKFRHPVPDAFFPRKFNYSSKQASADFQVIGCGSYPMHLMGHQIKTLSG 210
LYGMGHLHLSK+KFR+P+PD +K N + AD C
Sbjct: 145 LYGMGHLHLSKMKFRYPIPDTC--KKLNTDDQHRKADSDAHAC----------------- 185
Query: 211 LNIKVFLSLKEMLQWMVC-----------LIHCSATDIFASSIFLYDDCVGDIVNQRLMM 259
L K+++S +WM HC D V +I+NQ+ M
Sbjct: 186 LESKLWMSSTISSEWMWSPPSKSGALSNDEAHCPKRQSICE--LEGDTSVDEILNQQFKM 243
Query: 260 YTSLSQTRSDVKMVQSLVPIWEVCSHPIYKLFNIQYIYPLVNFTTFQEEYERTGINEAVM 319
Y+SLSQT SDV MVQSLVPIWE E+ +R G++EA M
Sbjct: 244 YSSLSQTCSDVNMVQSLVPIWE-------------------------EQQKRNGVHEATM 278
Query: 320 APDPGKPRPQDVLRTLSLGLEFENVLMEMCGEGQETVSSFGNDFEVLKSVACATDEENLI 379
DPGKP P+DV++ LS+GL+FE +E+C E + S+ C + L
Sbjct: 279 PSDPGKPLPEDVMKLLSVGLDFEKKFIELCSEAE-------------TSLFCTFSAKEL- 324
Query: 380 KLGPANYDYKDPEYLTCLKEGKIL-SALAPQGLVHQEKISLMPSKGKDTCPELPFGGEIH 438
+E I+ SA P L K+ +G D E+ EI
Sbjct: 325 ------------------RETDIIGSASPPASLCKNAKLH---EEGTDANLEMLTMDEIP 363
Query: 439 SSEMVGAPGQKEPLIFGIDIPQATDTEALGLLKWLATSQAAEDLNSDDELLHETILSPLL 498
SSEM+G +DI A D EA +LKWLATSQAAED+NSDDEL++ETIL+PLL
Sbjct: 364 SSEMIGT----------LDIKAAADKEAQNILKWLATSQAAEDINSDDELVYETILTPLL 413
Query: 499 PETTIDKVLEKANTDYERESQKECQDILDSIEDEVNVDGLEERNSSTVDPSNHPETSSHK 558
P TIDKVLE+AN YE ESQKECQDILDSI+D + ++ E+ S ++D SS
Sbjct: 414 PAATIDKVLEEANIAYENESQKECQDILDSIDDMLELELPNEKPSHSLDHYCPIGASSSS 473
Query: 559 KIPQIDGSSDDLYLLPCSGSSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKCNVKKKLW 618
+PQ+DGS+DD + P +G SS EI SE R+ +H V +T T+ K + + K W
Sbjct: 474 MLPQVDGSNDDEFSSPRDSLAGTSSLVEINSEYTRASEHHVLPNTDTSTLIK-DKRNKQW 532
Query: 619 GSLPFSVSEQFNKDIETVSCNISSLCVTEVKDHGATGSLVGNELGKSFDALEREDADAHD 678
GSLPFS ++ N D E + ++ +E D + L NE+ + + DA D
Sbjct: 533 GSLPFSSIDKANNDGEHATLLVTHPFESETGDSAHSNYLNRNEVRNGACFIRNKGRDASD 592
Query: 679 IKEATAVTGGSVRDLMRRKRSYR-ESSECEPPRVKRVNVTGEQKNALSMCEKQLEFDTLQ 737
KE + S+RDLMRRKRSYR E ++CE K++ + ++ + +KQL+ T+Q
Sbjct: 593 SKEVHKLVNCSLRDLMRRKRSYRVEQADCESGTTKKLLLDRHEEQNACLWQKQLDLKTMQ 652
Query: 738 NDECE 742
DE E
Sbjct: 653 TDEEE 657
>gi|12324676|gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis thaliana]
Length = 1871
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/659 (64%), Positives = 515/659 (78%), Gaps = 21/659 (3%)
Query: 814 QGSLTGVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSS--- 870
QG+ G+P +LNDGS LY+L P FSPPSVDSV +W+ +D ++ D +K + +
Sbjct: 885 QGTSLGIPLHHLNDGSNLYLLTPAFSPPSVDSVLQWISNDKGDSNIDSEKQPLRDNHNDR 944
Query: 871 -------LKGSDIRPVLEEMHQEADEMISTEPTPDLNGVTAI---MHNEGHIAEPNACAD 920
S++ V E + Q + +++E N T + +G N A
Sbjct: 945 GASFTDLASASNVVSVSEHVEQHNNLFVNSES----NAYTESEIDLKPKGTFLNLNLQAS 1000
Query: 921 CLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDS 980
Q++SQISGPDG+S PTPLSQ+GF+DPAS GAG+QLT+LSIEV AESRGDLRPDPR+DS
Sbjct: 1001 VSQELSQISGPDGKSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDS 1060
Query: 981 INVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCS 1040
+NV+AL +ND E++VLL+ QR++ G+ CK+ V +E LF +FI+ LC
Sbjct: 1061 VNVIALVVQNDDSFVAEVFVLLFSPDSIDQRNVDGLSGCKLSVFLEERQLFRYFIETLCK 1120
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+DPD+L+GWDIQGGS+GFLAERAA LGI LN+ISRTP + D++ R + +N+L
Sbjct: 1121 WDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNK---RKLGNNLL 1177
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+P+VA ++ +IEDEWGRTHASG+HVGGRIVLN WRL+RGEVKLNMYT+EAV+E V
Sbjct: 1178 PDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAV 1237
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
LR+K+PSIP++VLT+WF+SGP ARYRC+EYV+ RA LNLEIM+QLDMINRTSELARVFG
Sbjct: 1238 LRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFG 1297
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN QVASQPAMEC+PLVMEPES FY D
Sbjct: 1298 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYDD 1357
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
PV+VLDFQSLYPSM+IAYNLCF TCLGK+ K NTLGVSS+ DL VL+DL +++L P
Sbjct: 1358 PVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNTLGVSSYSLDLDVLQDL-NQILQTP 1416
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
N VMYVPP+VR+G+LPRLLEEILSTRIMVK+A+KKL PS+ +LHRIFNARQLALKLIANV
Sbjct: 1417 NSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANV 1476
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN N+ W A+V+YGDTD V +
Sbjct: 1477 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNANDNWNARVVYGDTDSMFVLL 1535
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 299/758 (39%), Positives = 401/758 (52%), Gaps = 146/758 (19%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
MADSQ SN+FS+RIVSID+YMA PIPGY+ICYSS QG +VNEVPVIR+YGSTPAGQKTC
Sbjct: 1 MADSQSGSNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVR 120
LHIHRALPYLY+PC++IP++ + DG A+SL LEKALK+KG+A SKRQH+H+C +VR
Sbjct: 61 LHIHRALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASKRQHIHDCEIVR 120
Query: 121 AKK-----------------------------------GGAVFDKSLQPHESHIPFLLQF 145
AKK GAV KSLQP+ESHIPF+LQF
Sbjct: 121 AKKFYGYHSTEEAFVKIYLYPYSSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQF 180
Query: 146 LVDYNLYGMGHLHLSKLKFRHPVPDAFFPRKFNYSS--KQASADFQVIGCGSYPMHLMGH 203
LVDYNLYGMGH+H+SK+KFR PVP F PR+F+ Q + + S +
Sbjct: 181 LVDYNLYGMGHVHISKMKFRSPVPHHFRPRRFDLDDCPGQRIDEVAITKANSSAAASVSF 240
Query: 204 QIKTLSGLNIKVFLSLKEMLQWMVCLIHCSATDIFASSI-------------FLYDDCVG 250
+ +LS + QWM L S T + S D
Sbjct: 241 PVWSLSTIPG----------QWMWNLSEESDTPLSQSQHRHQHHYRRQSLCELEGDATSS 290
Query: 251 DIVNQRLMMYTSLSQTRSDVKMVQSLVPIWEVCSHPIYKLFNIQYIYPLVNFTTFQEEYE 310
DI+NQ+ MY SLSQ +SD MVQSLV IWE EEYE
Sbjct: 291 DILNQQFKMYNSLSQAQSDTNMVQSLVAIWE-------------------------EEYE 325
Query: 311 RTGINEAVMAPDPGKPRPQDVLRTLSLGLEFENVLMEMC--------GEGQETVSSFGND 362
RTG+++A + PDPGKP DVL+T+S + F N+L EM G VSS G D
Sbjct: 326 RTGVHDAPIPPDPGKPSAADVLQTMSDYVGFGNMLKEMLNKVELSPPGMKPTAVSSAGPD 385
Query: 363 FEVLKSVACATDEENLIKLGPANYDYKDPEYLTCLKEGKILSALAPQGLVHQEKISLMPS 422
+ TD + L + ++ E L+ L E E+ S+
Sbjct: 386 MHAKPEI---TDLQALNHMVGTCSEFPASEQLSPLGE-------------KSEEASM--- 426
Query: 423 KGKDTCPELPFGGEIHSSEMVGAPGQKEPLIFGIDIP-QATDTEALGLLKWLATSQAAED 481
+ E + P + D P Q D EALGL KW A+SQAAED
Sbjct: 427 ---------------ENDEYMKTPTDR-------DTPAQIQDAEALGLFKWFASSQAAED 464
Query: 482 LNSDDELLHETILSPLLPETTIDKVLEKANTDYERESQKECQDILDSIEDEVNVDGLEER 541
+NSDDE+L ETILSPLLP +I+KVLE A+TDY +SQKECQDILDS E+ + +R
Sbjct: 465 INSDDEILRETILSPLLPLASINKVLEMASTDYVSQSQKECQDILDSQENLPDFGSSTKR 524
Query: 542 NSSTVDPSNHPETSSHKKIPQIDGSSDDLYLLPCSGSSGNSSKKEIKSESIRSFQHQVPQ 601
+ S + TSS K+ +I+ +SD +G+S NS ++ KS+ S +
Sbjct: 525 ALPSNPDSQNLRTSSDKQSLEIEVASDVPDSSTSNGASENSFRRYRKSDLHTSEVMEYKN 584
Query: 602 DTWTNAASKCNVKKKLWGSLPFSVSEQFNKDIETVSCNISSLCVTEVKDHGATGSLVGNE 661
+++ + N +WG LPF++++ KD ++ + + L +T++ + NE
Sbjct: 585 RSFSKSNKPSN---SVWGPLPFTLTKNLQKDFDSTNAS-DKLGLTKISSYPM------NE 634
Query: 662 LGKSFDALERE-DADAHDIKEATAVTGGSVRDLMRRKR 698
+ ++ +E AD + + + G S+RDLMR+KR
Sbjct: 635 MTDNYIVPVKEHQADVCNTIDRNVLAGCSLRDLMRKKR 672
>gi|42563023|ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|34330129|dbj|BAC82450.1| catalytic subunit of polymerase zeta [Arabidopsis thaliana]
gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
Length = 1890
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/659 (64%), Positives = 515/659 (78%), Gaps = 21/659 (3%)
Query: 814 QGSLTGVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSS--- 870
QG+ G+P +LNDGS LY+L P FSPPSVDSV +W+ +D ++ D +K + +
Sbjct: 881 QGTSLGIPLHHLNDGSNLYLLTPAFSPPSVDSVLQWISNDKGDSNIDSEKQPLRDNHNDR 940
Query: 871 -------LKGSDIRPVLEEMHQEADEMISTEPTPDLNGVTAI---MHNEGHIAEPNACAD 920
S++ V E + Q + +++E N T + +G N A
Sbjct: 941 GASFTDLASASNVVSVSEHVEQHNNLFVNSES----NAYTESEIDLKPKGTFLNLNLQAS 996
Query: 921 CLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDS 980
Q++SQISGPDG+S PTPLSQ+GF+DPAS GAG+QLT+LSIEV AESRGDLRPDPR+DS
Sbjct: 997 VSQELSQISGPDGKSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDS 1056
Query: 981 INVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCS 1040
+NV+AL +ND E++VLL+ QR++ G+ CK+ V +E LF +FI+ LC
Sbjct: 1057 VNVIALVVQNDDSFVAEVFVLLFSPDSIDQRNVDGLSGCKLSVFLEERQLFRYFIETLCK 1116
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+DPD+L+GWDIQGGS+GFLAERAA LGI LN+ISRTP + D++ R + +N+L
Sbjct: 1117 WDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNK---RKLGNNLL 1173
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+P+VA ++ +IEDEWGRTHASG+HVGGRIVLN WRL+RGEVKLNMYT+EAV+E V
Sbjct: 1174 PDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAV 1233
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
LR+K+PSIP++VLT+WF+SGP ARYRC+EYV+ RA LNLEIM+QLDMINRTSELARVFG
Sbjct: 1234 LRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFG 1293
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN QVASQPAMEC+PLVMEPES FY D
Sbjct: 1294 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYDD 1353
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
PV+VLDFQSLYPSM+IAYNLCF TCLGK+ K NTLGVSS+ DL VL+DL +++L P
Sbjct: 1354 PVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNTLGVSSYSLDLDVLQDL-NQILQTP 1412
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
N VMYVPP+VR+G+LPRLLEEILSTRIMVK+A+KKL PS+ +LHRIFNARQLALKLIANV
Sbjct: 1413 NSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANV 1472
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN N+ W A+V+YGDTD V +
Sbjct: 1473 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNANDNWNARVVYGDTDSMFVLL 1531
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 298/754 (39%), Positives = 401/754 (53%), Gaps = 142/754 (18%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
MADSQ SN+FS+RIVSID+YMA PIPGY+ICYSS QG +VNEVPVIR+YGSTPAGQKTC
Sbjct: 1 MADSQSGSNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVR 120
LHIHRALPYLY+PC++IP++ + DG A+SL LEKALK+KG+A SKRQH+H+C +VR
Sbjct: 61 LHIHRALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASKRQHIHDCEIVR 120
Query: 121 AKK-------------------------------GGAVFDKSLQPHESHIPFLLQFLVDY 149
AKK GAV KSLQP+ESHIPF+LQFLVDY
Sbjct: 121 AKKFYGYHSTEEAFVKIYLSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDY 180
Query: 150 NLYGMGHLHLSKLKFRHPVPDAFFPRKFNYSS--KQASADFQVIGCGSYPMHLMGHQIKT 207
NLYGMGH+H+SK+KFR PVP F PR+F+ Q + + S + + +
Sbjct: 181 NLYGMGHVHISKMKFRSPVPHHFRPRRFDLDDCPGQRIDEVAITKANSSAAASVSFPVWS 240
Query: 208 LSGLNIKVFLSLKEMLQWMVCLIHCSATDIFASSI-------------FLYDDCVGDIVN 254
LS + QWM L S T + S D DI+N
Sbjct: 241 LSTIPG----------QWMWNLSEESDTPLSQSQHRHQHHYRRQSLCELEGDATSSDILN 290
Query: 255 QRLMMYTSLSQTRSDVKMVQSLVPIWEVCSHPIYKLFNIQYIYPLVNFTTFQEEYERTGI 314
Q+ MY SLSQ +SD MVQSLV IWE EEYERTG+
Sbjct: 291 QQFKMYNSLSQAQSDTNMVQSLVAIWE-------------------------EEYERTGV 325
Query: 315 NEAVMAPDPGKPRPQDVLRTLSLGLEFENVLMEMC--------GEGQETVSSFGNDFEVL 366
++A + PDPGKP DVL+T+S + F N+L EM G VSS G D
Sbjct: 326 HDAPIPPDPGKPSAADVLQTMSDYVGFGNMLKEMLNKVELSPPGMKPTAVSSAGPDMHAK 385
Query: 367 KSVACATDEENLIKLGPANYDYKDPEYLTCLKEGKILSALAPQGLVHQEKISLMPSKGKD 426
+ TD + L + ++ E L+ L E E+ S+
Sbjct: 386 PEI---TDLQALNHMVGTCSEFPASEQLSPLGE-------------KSEEASM------- 422
Query: 427 TCPELPFGGEIHSSEMVGAPGQKEPLIFGIDIP-QATDTEALGLLKWLATSQAAEDLNSD 485
+ E + P + D P Q D EALGL KW A+SQAAED+NSD
Sbjct: 423 -----------ENDEYMKTPTDR-------DTPAQIQDAEALGLFKWFASSQAAEDINSD 464
Query: 486 DELLHETILSPLLPETTIDKVLEKANTDYERESQKECQDILDSIEDEVNVDGLEERNSST 545
DE+L ETILSPLLP +I+KVLE A+TDY +SQKECQDILDS E+ + +R +
Sbjct: 465 DEILRETILSPLLPLASINKVLEMASTDYVSQSQKECQDILDSQENLPDFGSSTKRALPS 524
Query: 546 VDPSNHPETSSHKKIPQIDGSSDDLYLLPCSGSSGNSSKKEIKSESIRSFQHQVPQDTWT 605
S + TSS K+ +I+ +SD +G+S NS ++ KS+ S + +++
Sbjct: 525 NPDSQNLRTSSDKQSLEIEVASDVPDSSTSNGASENSFRRYRKSDLHTSEVMEYKNRSFS 584
Query: 606 NAASKCNVKKKLWGSLPFSVSEQFNKDIETVSCNISSLCVTEVKDHGATGSLVGNELGKS 665
+ N +WG LPF++++ KD ++ + + L +T++ + NE+ +
Sbjct: 585 KSNKPSN---SVWGPLPFTLTKNLQKDFDSTNAS-DKLGLTKISSYPM------NEMTDN 634
Query: 666 FDA-LEREDADAHDIKEATAVTGGSVRDLMRRKR 698
+ ++ AD + + + G S+RDLMR+KR
Sbjct: 635 YIVPVKEHQADVCNTIDRNVLAGCSLRDLMRKKR 668
>gi|334183720|ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|332196535|gb|AEE34656.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
Length = 1916
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/659 (64%), Positives = 515/659 (78%), Gaps = 21/659 (3%)
Query: 814 QGSLTGVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSS--- 870
QG+ G+P +LNDGS LY+L P FSPPSVDSV +W+ +D ++ D +K + +
Sbjct: 907 QGTSLGIPLHHLNDGSNLYLLTPAFSPPSVDSVLQWISNDKGDSNIDSEKQPLRDNHNDR 966
Query: 871 -------LKGSDIRPVLEEMHQEADEMISTEPTPDLNGVTAI---MHNEGHIAEPNACAD 920
S++ V E + Q + +++E N T + +G N A
Sbjct: 967 GASFTDLASASNVVSVSEHVEQHNNLFVNSES----NAYTESEIDLKPKGTFLNLNLQAS 1022
Query: 921 CLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDS 980
Q++SQISGPDG+S PTPLSQ+GF+DPAS GAG+QLT+LSIEV AESRGDLRPDPR+DS
Sbjct: 1023 VSQELSQISGPDGKSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDS 1082
Query: 981 INVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCS 1040
+NV+AL +ND E++VLL+ QR++ G+ CK+ V +E LF +FI+ LC
Sbjct: 1083 VNVIALVVQNDDSFVAEVFVLLFSPDSIDQRNVDGLSGCKLSVFLEERQLFRYFIETLCK 1142
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+DPD+L+GWDIQGGS+GFLAERAA LGI LN+ISRTP + D++ R + +N+L
Sbjct: 1143 WDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNK---RKLGNNLL 1199
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+P+VA ++ +IEDEWGRTHASG+HVGGRIVLN WRL+RGEVKLNMYT+EAV+E V
Sbjct: 1200 PDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAV 1259
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
LR+K+PSIP++VLT+WF+SGP ARYRC+EYV+ RA LNLEIM+QLDMINRTSELARVFG
Sbjct: 1260 LRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFG 1319
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN QVASQPAMEC+PLVMEPES FY D
Sbjct: 1320 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYDD 1379
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
PV+VLDFQSLYPSM+IAYNLCF TCLGK+ K NTLGVSS+ DL VL+DL +++L P
Sbjct: 1380 PVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNTLGVSSYSLDLDVLQDL-NQILQTP 1438
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
N VMYVPP+VR+G+LPRLLEEILSTRIMVK+A+KKL PS+ +LHRIFNARQLALKLIANV
Sbjct: 1439 NSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANV 1498
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN N+ W A+V+YGDTD V +
Sbjct: 1499 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNANDNWNARVVYGDTDSMFVLL 1557
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 299/770 (38%), Positives = 408/770 (52%), Gaps = 148/770 (19%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
MADSQ SN+FS+RIVSID+YMA PIPGY+ICYSS QG +VNEVPVIR+YGSTPAGQKTC
Sbjct: 1 MADSQSGSNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVR 120
LHIHRALPYLY+PC++IP++ + DG A+SL LEKALK+KG+A SKRQH+H+C +VR
Sbjct: 61 LHIHRALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASKRQHIHDCEIVR 120
Query: 121 AKK-------------------------------GGAVFDKSLQPHESHIPFLLQFLVDY 149
AKK GAV KSLQP+ESHIPF+LQFLVDY
Sbjct: 121 AKKFYGYHSTEEAFVKIYLSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDY 180
Query: 150 NLYGMGHLHLSKLKFRHPVPDAFFPRKFNYSS--KQASADFQVIGCGSYPMHLMGHQIKT 207
NLYGMGH+H+SK+KFR PVP F PR+F+ Q + + S + + +
Sbjct: 181 NLYGMGHVHISKMKFRSPVPHHFRPRRFDLDDCPGQRIDEVAITKANSSAAASVSFPVWS 240
Query: 208 LSGLNIKVFLSLKE----------------MLQWMVCLIHCSATDI-------FASSIFL 244
LS + + +L E + +C + AT F F+
Sbjct: 241 LSTIPGQWMWNLSEESDTPLSQSQHRHQHHYRRQSLCELEGDATSSGNFPDSKFNCLCFM 300
Query: 245 YD------DCVGDIVNQRLMMYTSLSQTRSDVKMVQSLVPIWEVCSHPIYKLFNIQYIYP 298
YD + DI+NQ+ MY SLSQ +SD MVQSLV IWE
Sbjct: 301 YDRTFELASSLVDILNQQFKMYNSLSQAQSDTNMVQSLVAIWE----------------- 343
Query: 299 LVNFTTFQEEYERTGINEAVMAPDPGKPRPQDVLRTLSLGLEFENVLMEMC--------G 350
EEYERTG+++A + PDPGKP DVL+T+S + F N+L EM G
Sbjct: 344 --------EEYERTGVHDAPIPPDPGKPSAADVLQTMSDYVGFGNMLKEMLNKVELSPPG 395
Query: 351 EGQETVSSFGNDFEVLKSVACATDEENLIKLGPANYDYKDPEYLTCLKEGKILSALAPQG 410
VSS G D + TD + L + ++ E L+ L E
Sbjct: 396 MKPTAVSSAGPDMHAKPEI---TDLQALNHMVGTCSEFPASEQLSPLGE----------- 441
Query: 411 LVHQEKISLMPSKGKDTCPELPFGGEIHSSEMVGAPGQKEPLIFGIDIP-QATDTEALGL 469
E+ S+ + E + P + D P Q D EALGL
Sbjct: 442 --KSEEASM------------------ENDEYMKTPTDR-------DTPAQIQDAEALGL 474
Query: 470 LKWLATSQAAEDLNSDDELLHETILSPLLPETTIDKVLEKANTDYERESQKECQDILDSI 529
KW A+SQAAED+NSDDE+L ETILSPLLP +I+KVLE A+TDY +SQKECQDILDS
Sbjct: 475 FKWFASSQAAEDINSDDEILRETILSPLLPLASINKVLEMASTDYVSQSQKECQDILDSQ 534
Query: 530 EDEVNVDGLEERNSSTVDPSNHPETSSHKKIPQIDGSSDDLYLLPCSGSSGNSSKKEIKS 589
E+ + +R + S + TSS K+ +I+ +SD +G+S NS ++ KS
Sbjct: 535 ENLPDFGSSTKRALPSNPDSQNLRTSSDKQSLEIEVASDVPDSSTSNGASENSFRRYRKS 594
Query: 590 ESIRSFQHQVPQDTWTNAASKCNVKKKLWGSLPFSVSEQFNKDIETVSCNISSLCVTEVK 649
+ S + +++ + N +WG LPF++++ KD ++ + + L +T++
Sbjct: 595 DLHTSEVMEYKNRSFSKSNKPSN---SVWGPLPFTLTKNLQKDFDSTNAS-DKLGLTKIS 650
Query: 650 DHGATGSLVGNELGKSFDA-LEREDADAHDIKEATAVTGGSVRDLMRRKR 698
+ NE+ ++ ++ AD + + + G S+RDLMR+KR
Sbjct: 651 SYPM------NEMTDNYIVPVKEHQADVCNTIDRNVLAGCSLRDLMRKKR 694
>gi|3176661|gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
[Arabidopsis thaliana]
Length = 1894
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/659 (64%), Positives = 515/659 (78%), Gaps = 21/659 (3%)
Query: 814 QGSLTGVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSS--- 870
QG+ G+P +LNDGS LY+L P FSPPSVDSV +W+ +D ++ D +K + +
Sbjct: 885 QGTSLGIPLHHLNDGSNLYLLTPAFSPPSVDSVLQWISNDKGDSNIDSEKQPLRDNHNDR 944
Query: 871 -------LKGSDIRPVLEEMHQEADEMISTEPTPDLNGVTAI---MHNEGHIAEPNACAD 920
S++ V E + Q + +++E N T + +G N A
Sbjct: 945 GASFTDLASASNVVSVSEHVEQHNNLFVNSES----NAYTESEIDLKPKGTFLNLNLQAS 1000
Query: 921 CLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDS 980
Q++SQISGPDG+S PTPLSQ+GF+DPAS GAG+QLT+LSIEV AESRGDLRPDPR+DS
Sbjct: 1001 VSQELSQISGPDGKSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDS 1060
Query: 981 INVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCS 1040
+NV+AL +ND E++VLL+ QR++ G+ CK+ V +E LF +FI+ LC
Sbjct: 1061 VNVIALVVQNDDSFVAEVFVLLFSPDSIDQRNVDGLSGCKLSVFLEERQLFRYFIETLCK 1120
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+DPD+L+GWDIQGGS+GFLAERAA LGI LN+ISRTP + D++ R + +N+L
Sbjct: 1121 WDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNK---RKLGNNLL 1177
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+P+VA ++ +IEDEWGRTHASG+HVGGRIVLN WRL+RGEVKLNMYT+EAV+E V
Sbjct: 1178 PDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAV 1237
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
LR+K+PSIP++VLT+WF+SGP ARYRC+EYV+ RA LNLEIM+QLDMINRTSELARVFG
Sbjct: 1238 LRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFG 1297
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN QVASQPAMEC+PLVMEPES FY D
Sbjct: 1298 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYDD 1357
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
PV+VLDFQSLYPSM+IAYNLCF TCLGK+ K NTLGVSS+ DL VL+DL +++L P
Sbjct: 1358 PVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNTLGVSSYSLDLDVLQDL-NQILQTP 1416
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
N VMYVPP+VR+G+LPRLLEEILSTRIMVK+A+KKL PS+ +LHRIFNARQLALKLIANV
Sbjct: 1417 NSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANV 1476
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN N+ W A+V+YGDTD V +
Sbjct: 1477 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNANDNWNARVVYGDTDSMFVLL 1535
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 298/758 (39%), Positives = 401/758 (52%), Gaps = 146/758 (19%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
MADSQ SN+FS+RIVSID+YMA PIPGY+ICYSS QG +VNEVPVIR+YGSTPAGQKTC
Sbjct: 1 MADSQSGSNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVR 120
LHIHRALPYLY+PC++IP++ + DG A+SL LEKALK+KG+A SKRQH+H+C +VR
Sbjct: 61 LHIHRALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASKRQHIHDCEIVR 120
Query: 121 AKK-----------------------------------GGAVFDKSLQPHESHIPFLLQF 145
AKK GAV KSLQP+ESHIPF+LQF
Sbjct: 121 AKKFYGYHSTEEAFVKIYLYPYSSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQF 180
Query: 146 LVDYNLYGMGHLHLSKLKFRHPVPDAFFPRKFNYSS--KQASADFQVIGCGSYPMHLMGH 203
LVDYNLYGMGH+H+SK+KFR PVP F PR+F+ Q + + S +
Sbjct: 181 LVDYNLYGMGHVHISKMKFRSPVPHHFRPRRFDLDDCPGQRIDEVAITKANSSAAASVSF 240
Query: 204 QIKTLSGLNIKVFLSLKEMLQWMVCLIHCSATDIFASSI-------------FLYDDCVG 250
+ +LS + QWM L S T + S D
Sbjct: 241 PVWSLSTIPG----------QWMWNLSEESDTPLSQSQHRHQHHYRRQSLCELEGDATSS 290
Query: 251 DIVNQRLMMYTSLSQTRSDVKMVQSLVPIWEVCSHPIYKLFNIQYIYPLVNFTTFQEEYE 310
DI+NQ+ MY SLSQ +SD MVQSLV IWE EEYE
Sbjct: 291 DILNQQFKMYNSLSQAQSDTNMVQSLVAIWE-------------------------EEYE 325
Query: 311 RTGINEAVMAPDPGKPRPQDVLRTLSLGLEFENVLMEMC--------GEGQETVSSFGND 362
RTG+++A + PDPGKP DVL+T+S + F N+L EM G VSS G D
Sbjct: 326 RTGVHDAPIPPDPGKPSAADVLQTMSDYVGFGNMLKEMLNKVELSPPGMKPTAVSSAGPD 385
Query: 363 FEVLKSVACATDEENLIKLGPANYDYKDPEYLTCLKEGKILSALAPQGLVHQEKISLMPS 422
+ TD + L + ++ E L+ L E E+ S+
Sbjct: 386 MHAKPEI---TDLQALNHMVGTCSEFPASEQLSPLGE-------------KSEEASM--- 426
Query: 423 KGKDTCPELPFGGEIHSSEMVGAPGQKEPLIFGIDIP-QATDTEALGLLKWLATSQAAED 481
+ E + P + D P Q D EALGL KW A+SQAAED
Sbjct: 427 ---------------ENDEYMKTPTDR-------DTPAQIQDAEALGLFKWFASSQAAED 464
Query: 482 LNSDDELLHETILSPLLPETTIDKVLEKANTDYERESQKECQDILDSIEDEVNVDGLEER 541
+NSDDE+L ETILSPLLP +I+KVLE A+TDY +SQKECQDILDS E+ + +R
Sbjct: 465 INSDDEILRETILSPLLPLASINKVLEMASTDYVSQSQKECQDILDSQENLPDFGSSTKR 524
Query: 542 NSSTVDPSNHPETSSHKKIPQIDGSSDDLYLLPCSGSSGNSSKKEIKSESIRSFQHQVPQ 601
+ S + TSS K+ +I+ +SD +G+S NS ++ KS+ S +
Sbjct: 525 ALPSNPDSQNLRTSSDKQSLEIEVASDVPDSSTSNGASENSFRRYRKSDLHTSEVMEYKN 584
Query: 602 DTWTNAASKCNVKKKLWGSLPFSVSEQFNKDIETVSCNISSLCVTEVKDHGATGSLVGNE 661
+++ + N +WG LPF++++ KD ++ + + L +T++ + NE
Sbjct: 585 RSFSKSNKPSN---SVWGPLPFTLTKNLQKDFDSTNAS-DKLGLTKISSYPM------NE 634
Query: 662 LGKSFDA-LEREDADAHDIKEATAVTGGSVRDLMRRKR 698
+ ++ ++ AD + + + G S+RDLMR+KR
Sbjct: 635 MTDNYIVPVKEHQADVCNTIDRNVLAGCSLRDLMRKKR 672
>gi|297841441|ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata]
gi|297334443|gb|EFH64861.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata]
Length = 1899
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/671 (64%), Positives = 515/671 (76%), Gaps = 31/671 (4%)
Query: 807 NNDSNLN--QGSLTGVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKA 864
N D N + QG+ G+P +LNDGS LY+L P SPPSVDSV +W+ D + D +K
Sbjct: 883 NKDGNKHFFQGASLGIPLHHLNDGSNLYLLAPALSPPSVDSVLQWIAEDKGDYNIDSEKQ 942
Query: 865 SVEHSSL----------KGSDIRPVLEEMHQEADEMIS------TEPTPDLNGVTAIMHN 908
+E + S++ V E + + ++ TE DL ++
Sbjct: 943 PLEDDHIDRGASFTDLASASNVVSVSEHVQHHNNVFVNSESNTYTESEIDLKRRGTFLNL 1002
Query: 909 EGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAES 968
I+ Q++SQISGPDG+S PTPLSQ+GF+DPAS GAG+QLT+LSIEV AES
Sbjct: 1003 NSQIS---------QEMSQISGPDGKSGPTPLSQMGFRDPASMGAGQQLTVLSIEVHAES 1053
Query: 969 RGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEI 1028
RGDLRPDPR+DS+NV+AL +ND E++VLL QR++ G+ CK V +E
Sbjct: 1054 RGDLRPDPRFDSVNVIALVVQNDDSFVAEVFVLLVSPDSIDQRNVDGLSGCKFSVFLEER 1113
Query: 1029 HLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDS 1088
LFS+FI+ LC +DPDIL+GWDIQGGS+GFLAERAA LGI LN+ISRTP S DS
Sbjct: 1114 QLFSYFIETLCKWDPDILLGWDIQGGSIGFLAERAAQLGIRFLNNISRTP--SPTTRNDS 1171
Query: 1089 EISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKL 1148
+ ++R + N+L +P+VA+ ++ +IEDEWGRTHASG+HVGGRIVLN WRL+RGEVKL
Sbjct: 1172 D-NKRKLGKNLLPDPLVADPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKL 1230
Query: 1149 NMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDM 1208
NMYT+EAV+E VLR+KIPSIP++VLT+WF+SGP ARYRC+EYVV R LNLEIM+QLDM
Sbjct: 1231 NMYTIEAVSEAVLRQKIPSIPYKVLTEWFSSGPAGARYRCIEYVVRRTNLNLEIMSQLDM 1290
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN QVASQPAMEC+P
Sbjct: 1291 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECVP 1350
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHV 1328
LVMEPES FY DPV+VLDFQSLYPSM+IAYNLCF TCLGK+ K NTLGVSS+ DL V
Sbjct: 1351 LVMEPESAFYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNTLGVSSYSLDLGV 1410
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L+DL +++L PN VMYVPP+VR+G+LPRLLEEILSTRIMVK+A+KKL PS+ +LHRIFN
Sbjct: 1411 LQDL-NQILQTPNSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFN 1469
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN N+ W A+V+
Sbjct: 1470 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNANDSWNARVV 1529
Query: 1449 YGDTDRYTVCI 1459
YGDTD V +
Sbjct: 1530 YGDTDSMFVLL 1540
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 303/750 (40%), Positives = 402/750 (53%), Gaps = 136/750 (18%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
MADSQ SN+FS+RIVSID+YMA PIPGYDICYSS QGG+VNEVPVIR+YGSTPAGQKTC
Sbjct: 1 MADSQSGSNVFSLRIVSIDYYMASPIPGYDICYSSFQGGEVNEVPVIRIYGSTPAGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVR 120
LHIHRALPYLY+PC++IP++ + DG A+SL LEKALK+KG+A SKRQHVH+C +VR
Sbjct: 61 LHIHRALPYLYIPCSEIPLEHHKGADGSTLALSLELEKALKLKGNAASKRQHVHDCEIVR 120
Query: 121 AKK-----------------------------------GGAVFDKSLQPHESHIPFLLQF 145
AKK GAV KSLQP+ESHIPF+LQF
Sbjct: 121 AKKFYGYHSTEEAFVKIYLYPCNSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQF 180
Query: 146 LVDYNLYGMGHLHLSKLKFRHPVPDAFFPRKFNYS--SKQASADFQVIGCGSYPMHLMGH 203
LVDYNLYGM H+H+SK+KFR PVP F PR+F+ + Q + + S +
Sbjct: 181 LVDYNLYGMCHVHISKMKFRSPVPHHFLPRRFDLEDCAGQRIDEVAITKANSSAAASVSF 240
Query: 204 QIKTLSGLNIKVFLSLKEMLQWMVCLIHCSATDIFASSIFLY-----------DDCVGDI 252
I +LS + QWM + S T + S Y D + DI
Sbjct: 241 PIWSLSTIP----------GQWMWNISEESDTPLSQSQHRHYYRRQSLCELEGDATITDI 290
Query: 253 VNQRLMMYTSLSQTRSDVKMVQSLVPIWEVCSHPIYKLFNIQYIYPLVNFTTFQEEYERT 312
+NQ+ MY SLSQ +SD MVQSLV IWE EEYERT
Sbjct: 291 LNQQFKMYNSLSQAQSDTNMVQSLVAIWE-------------------------EEYERT 325
Query: 313 GINEAVMAPDPGKPRPQDVLRTLSLGLEFENVLMEMCGEGQETVSSFGNDFEVLKSVACA 372
G+++A + PDPGKP DVL+T+S + FEN+L EM E + S +K A +
Sbjct: 326 GVHDAPIPPDPGKPSAADVLKTMSDYVGFENMLKEMHNEVDLSQSD-------MKPTAVS 378
Query: 373 TDEENLIKLGPANYDYKDPEYLTCLKEGKILSALAPQGLVHQEKISLMPSKGKDTCPELP 432
+ GP + + L L S+ P E++S P
Sbjct: 379 S-------AGPDRHAKPEISDLQVLNHMVGTSSKFPAS----EQLS-------------P 414
Query: 433 FGGEIHSSEMVGAPGQKEPLIFGIDIP-QATDTEALGLLKWLATSQAAEDLNSDDELLHE 491
G + M K P+ D P + D EALGL KW A+SQAAED+NSDDE+L E
Sbjct: 415 LGERNGEASMENDEYMKTPM--DRDTPAEIQDAEALGLFKWFASSQAAEDINSDDEILRE 472
Query: 492 TILSPLLPETTIDKVLEKANTDYERESQKECQDILDSIEDEVNVDGLEERNSSTVDPSNH 551
TILSPLLP +I+KVLE A+TDY +SQKECQDILDS ED + +R + S +
Sbjct: 473 TILSPLLPLASINKVLEMASTDYVSQSQKECQDILDSQEDLPDFGSSTKRALPSNPDSQN 532
Query: 552 PETSSHKKIPQIDGSSDDLYLLPCSGSSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKC 611
TSS K+ + + +SD + +G+S NS ++ KSE + + + SK
Sbjct: 533 LITSSDKQSLETEVASDVPDISTSNGASENSFQRYRKSEVM---------ENKNRSYSKS 583
Query: 612 NV-KKKLWGSLPFSVSEQFNKDIETVSCNISSLCVTEVK-DHGATGSLVGNELGKSFDA- 668
N +WG L F++++ D ++ + + L +T++ DH NE ++
Sbjct: 584 NKPSNSVWGPLLFTLTKNLQNDFDSTNTS-DKLGLTKINSDHPM------NETTDKYNVP 636
Query: 669 LEREDADAHDIKEATAVTGGSVRDLMRRKR 698
++ AD + + + G S+RDLMR+KR
Sbjct: 637 VKEHQADVCNSIDKNVLAGCSLRDLMRKKR 666
>gi|449454163|ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222413
[Cucumis sativus]
Length = 2868
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/656 (64%), Positives = 509/656 (77%), Gaps = 18/656 (2%)
Query: 819 GVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSSLKGSDIRP 878
GVP Y NDGS +Y+L P SPPS +SV +WL +G D ++ ++L + +
Sbjct: 1013 GVPIHYRNDGSFMYILTPVNSPPSKNSVRQWLT-SGQGDEPLKDLLNISFAALGINLGKT 1071
Query: 879 VLEEMHQEADEMISTEPT--------PDLNG-VTAIMHN------EGHIAEPNACADCLQ 923
++++ ++ + S+ T P+ + T+ N G E ACA Q
Sbjct: 1072 LVDDRNKPLPQPASSSHTNIVIHGGLPNSSADETSFPENLEPVKSGGVTVEVRACASLSQ 1131
Query: 924 DISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINV 983
DISQISGPD SK TPLSQIGF+DPAS G +QLTLLS+EVQAE RGDLRPDP++D++ +
Sbjct: 1132 DISQISGPDEISKATPLSQIGFRDPASVGGIQQLTLLSVEVQAECRGDLRPDPQFDAVKM 1191
Query: 984 VALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDP 1043
+AL + DS E+ ++L K +S +R+ GI K+ V +E LF F+KI+ DP
Sbjct: 1192 IALTIQTDSGPVFEVVLILCTKIDSSKRNRYGI-GYKLLVHHEEKCLFQSFMKIIYLTDP 1250
Query: 1044 DILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEP 1103
DIL+GWDIQG SLG+LAERA+ LGI LLN ISRTP E+K+ GDS+ + I +N+++E
Sbjct: 1251 DILIGWDIQGSSLGYLAERASQLGINLLNKISRTPDEAKMLDGDSK-THTEIPENLVSEL 1309
Query: 1104 VVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRR 1163
V +S + +D IIEDEWGRTHASG+H+GGRIVLN+WRLMR EVKLN+YT+EAVAE VLRR
Sbjct: 1310 VDFDSTVVEDMIIEDEWGRTHASGIHIGGRIVLNLWRLMRNEVKLNIYTLEAVAEAVLRR 1369
Query: 1164 KIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDF 1223
K+P I RVLT+WF SGP +AR+RC+EY++ RAKLNL++++QLDMINRTSELARVFGI+F
Sbjct: 1370 KLPYIHHRVLTQWFNSGPRQARFRCIEYMMERAKLNLQLISQLDMINRTSELARVFGIEF 1429
Query: 1224 FSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVV 1283
FSVLSRGSQYRVESMLLRLAH+QNYLA+SPGN QVASQPAMECLPLVMEPESGFYADPVV
Sbjct: 1430 FSVLSRGSQYRVESMLLRLAHSQNYLAVSPGNLQVASQPAMECLPLVMEPESGFYADPVV 1489
Query: 1284 VLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGV 1343
VLDFQSLYPSM+IAYNLCFCTCLGK++PSK NTLGV S+ P+ VL +LKD++L PNGV
Sbjct: 1490 VLDFQSLYPSMIIAYNLCFCTCLGKVVPSKVNTLGVISYSPEQQVLNELKDQILFTPNGV 1549
Query: 1344 MYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYG 1403
MYV PKVRKG+LPRLLEEIL TRIMVKQ +KKLAPSQ++L R+FNARQLALKLIANVTYG
Sbjct: 1550 MYVTPKVRKGILPRLLEEILLTRIMVKQEMKKLAPSQKVLQRVFNARQLALKLIANVTYG 1609
Query: 1404 YTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
YTAAGFSGRMPCAELADSIVQCGR TLE AISFVN EKWKAKVIYGDTD V +
Sbjct: 1610 YTAAGFSGRMPCAELADSIVQCGRRTLESAISFVNSQEKWKAKVIYGDTDSMFVLL 1665
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 319/813 (39%), Positives = 435/813 (53%), Gaps = 122/813 (15%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M DSQ +S +FSVRIVSID+Y+APPIPG DI YSS QGGKVNEVPV+R+YGSTPAGQKTC
Sbjct: 1 MGDSQSESRVFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDG---YMHAISLALEKALKVKGSAGSKRQHVHECS 117
+H+H LPYLYVPC++I + L + G + +SLALEKALK+KG++GSKRQHVH +
Sbjct: 61 VHVHGVLPYLYVPCSEILLPLNDKGVGGEALGNNVSLALEKALKLKGNSGSKRQHVHGYN 120
Query: 118 LVRAKK------------------------------GGAVFDKSLQPHESHIPFLLQFLV 147
LVRAKK GAV +KSLQP+ESHIPF+LQFLV
Sbjct: 121 LVRAKKLYGYHSSEEFFIKIYLYYPQDITRAANLLLNGAVLEKSLQPYESHIPFVLQFLV 180
Query: 148 DYNLYGMGHLHLSKLKFRHPVPDAFFPRK-----FNYSSKQASADFQVIGC-GSYPMHLM 201
DYNLYGMG LHL KLKFRHPVPDA P K F Y + + D C S P
Sbjct: 181 DYNLYGMGLLHLVKLKFRHPVPDA--PGKKLDEIFRYMHENHAMDNP--NCMPSDPQADT 236
Query: 202 GHQIKTLSGLNIKVFLSLKEMLQWMVCLIHCSATDIFASSIFLY-----------DDCVG 250
++ + S V++S K WM +A D + + D V
Sbjct: 237 SNEAASTS----PVWISSKIPADWMWKFP--TAMDTLDDNGINFCKRQSVCELEGDVTVE 290
Query: 251 DIVNQRLMMYTSLSQTRSDVKMVQSLVPIWEVCSHPIYKLFNIQYIYPLVNFTTFQEEYE 310
DI+NQ +YTS SQ SDVKMVQSLV IWE EY
Sbjct: 291 DILNQHSKLYTSFSQNHSDVKMVQSLVSIWE--------------------------EYR 324
Query: 311 RTGINEAVMAPDPGKPRPQDVLRTLSLGLEFENVLMEMCGEGQE--TVSSFGNDFEVLKS 368
RTG+ EA + PDPGKP ++VL T S G+++E L E+ + ++ D +++S
Sbjct: 325 RTGVQEAPLPPDPGKPLAKEVLETFSPGMDYEKKLTELYERPKSPSVLTPLEKDQRLVQS 384
Query: 369 VACATDEENLIKLGPANYDYKDPEYLTCLKE-GKILSALAPQGLVHQEKISLMPSKGKDT 427
+ + E N+ ++G + + E+L ++E G+ S L E M ++G++
Sbjct: 385 LTSSVKEANITRVGCS-----EGEFLKHVEETGRTNSDLFFASSF--EDYDKMLTEGENV 437
Query: 428 CPELP----------------FGGEIHSSEMVGAPGQKEPLIFGIDIPQ-ATDTEALGLL 470
P L F H+ + + F I + A D EALGLL
Sbjct: 438 VPRLSMDEVQATPKGCGVSSVFRSNSHNLRRIDKLLLVLTVFFLHYIQRGAVDEEALGLL 497
Query: 471 KWLATSQAAEDLNSDDELLHETILSPLLPETTIDKVLEKANTDYERESQKECQDILDSIE 530
+WLATSQAA+D+NSDDELL ETIL PLLP +D+VLE+A+ DY ESQKECQDILDS+E
Sbjct: 498 RWLATSQAAQDINSDDELLCETILGPLLPAANMDQVLERASQDYGSESQKECQDILDSVE 557
Query: 531 DEVNVDGLEERNSST--VDPSNHPETSSHKKIPQIDGSSDDLYLLPCSGSSGNSSKKEIK 588
D +DG E N + D + +SS + IPQ+DG++DD++ GS+ N+ +++
Sbjct: 558 D---LDGFEGFNKTKCCTDDEHFFRSSSEETIPQLDGAADDMF-SSSGGSTENTPDRDLN 613
Query: 589 SESIRSFQHQVPQDTWTNAASKCNVKKKLWGSLPFSVSEQFNKDIETVSCNISSLCVTEV 648
E+ RS + + + + +K WGSLPF +E+ N D V+ + +
Sbjct: 614 VENERSSKLAILLHDIDSGSCSRKKEKSFWGSLPFHEAEKVNTDSRCVNSCRPGIYTSST 673
Query: 649 KDHGATGSLVGNELGKSFDALEREDADAHDIKEATAVTGGSVRDLMRRKRSYR-ESSECE 707
KD G + G+ L+ D ++ +E SVRDLMRRKR+YR E +C
Sbjct: 674 KDSEFVSCFSGEDGGQVDVTLQNADTSTYNSREGHLFVERSVRDLMRRKRNYRSEPLDCG 733
Query: 708 PPRVKRVNVTGEQKNALSMCEKQLEFDTLQNDE 740
+ V QK + + L+ + L+++E
Sbjct: 734 YGKANNFTVDSRQKKVV--LSRDLDSEVLRSNE 764
>gi|357511975|ref|XP_003626276.1| DNA polymerase [Medicago truncatula]
gi|355501291|gb|AES82494.1| DNA polymerase [Medicago truncatula]
Length = 1037
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/592 (68%), Positives = 466/592 (78%), Gaps = 40/592 (6%)
Query: 908 NEGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAE 967
NEG A D QDISQISGP +S TPLSQIGFQDPASAG G+QL LLSIEV AE
Sbjct: 89 NEGQTERIKAHMDHSQDISQISGPGEKSSFTPLSQIGFQDPASAGHGQQLALLSIEVLAE 148
Query: 968 SRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKE 1027
SRGDL PDP++D++N+VAL F+ D D VE+ VLL+ K QRSL G+ DCKV + E
Sbjct: 149 SRGDLLPDPQFDAVNIVALGFQKDCDATVEVLVLLHSKFVPCQRSLDGLSDCKVLNFTDE 208
Query: 1028 IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGD 1087
HL F KI+ S DPDILMGW+IQG SLGFLAERA+HLG GLLND+SRTP S I + D
Sbjct: 209 KHLLKEFTKIVSSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQD 268
Query: 1088 SEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVK 1147
+ SE+ I + + + + + +IIEDEWGRTHASG+HVGGRIVLN+WRL+RGEVK
Sbjct: 269 IKTSEKSILEPDIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVK 328
Query: 1148 LNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLD 1207
LN+Y+VEAVAE VLRRK+PS+ VLTKWF+ GPG+ARY+C++Y+V RAKLNLEI+NQLD
Sbjct: 329 LNLYSVEAVAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLD 388
Query: 1208 MINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN------------ 1255
M+NRTSELARVFGIDFFSVLSRGSQYRVESM LRLAHTQNY+AISPGN
Sbjct: 389 MVNRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVLSKFSHPPL 448
Query: 1256 -------------HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCF 1302
+QVASQPAMECLPLVMEPESGFY+DPVVVLDFQSLYPSM+IAYNLCF
Sbjct: 449 LLSVENYNVCYPSYQVASQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCF 508
Query: 1303 CTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
CTCLGK++PSK NTLGVS F P+ H+L+DLKD++L+ PNGVM+VP K+R+GVLPRLLEEI
Sbjct: 509 CTCLGKVVPSKTNTLGVSPFVPEQHILQDLKDQILLTPNGVMFVPSKIRRGVLPRLLEEI 568
Query: 1363 LSTRIMVKQAIKKLAPSQQILHR---------------IFNARQLALKLIANVTYGYTAA 1407
LSTRIMVKQA+KKL+PS+Q+L R IFNARQLALKLI+NVTYGYTAA
Sbjct: 569 LSTRIMVKQAMKKLSPSEQVLQRVLLLFMDSIASAMFSIFNARQLALKLISNVTYGYTAA 628
Query: 1408 GFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
GFSGRMPCAELADSIVQCGR TLEKAISFVN +EKW AKVIYGDTD V +
Sbjct: 629 GFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSMFVLL 680
>gi|326529379|dbj|BAK01083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1715
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/689 (59%), Positives = 491/689 (71%), Gaps = 47/689 (6%)
Query: 790 FDATSVEPRELQSDHPNNNDSNLNQGSLT----GVPTLYLNDGSCLYMLRPPFSPPSVDS 845
F+ T+ E +E N + + LT G+PT + NDGS LY+L FSPPS +
Sbjct: 680 FNQTAEENKE------NGSSQCMGSSELTPDTLGIPTHFQNDGSVLYLLTHAFSPPSAAA 733
Query: 846 VHKWLLHDDKGASGDMDKASVEHSSLKGSDIRPVLEEMHQEADEMISTEPTPDLNG---- 901
V +WL S D +EH H EA ++ P P
Sbjct: 734 VGQWLPQHTSSNSVS-DDQEIEHHPTSPP---------HAEALAFMANSPVPGSASEHTT 783
Query: 902 ---VTAIMHNEGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLT 958
+ +M + N D D SQIS D + K TPLSQIGF+DPAS G G+QLT
Sbjct: 784 AAFIDTVMMKSDQSNKENEKLDDWHDFSQISAEDEKHKLTPLSQIGFRDPASTGGGQQLT 843
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSES--HQRSLVGI 1016
+LSIEV AESR DLRPDPR+D+INVV+LA E+D D+ VE+ VL+ ++ +R+L G+
Sbjct: 844 ILSIEVFAESRADLRPDPRFDAINVVSLAVEDDGDNTVEVRVLIRGNNDKLHGRRNLDGV 903
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
C V V +E L +H I LCS DPDIL+GW+IQ GSLGFLAERAA+LGIGLL ISR
Sbjct: 904 IGCSVDVFPEEKDLLNHLIGALCSIDPDILVGWEIQLGSLGFLAERAAYLGIGLLKRISR 963
Query: 1077 T-PLESK-----IAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
T P ESK +A S+ E D++ + + E +W THASG+HV
Sbjct: 964 TLPHESKHPPKNLAHESSQAPEASPADDVTVD------------VSETDWSHTHASGVHV 1011
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GGRIVLN+WRLMRGEVKLN Y++EAVA+ VLRRK+P +P + L +WFA+GPGR R+RC+E
Sbjct: 1012 GGRIVLNLWRLMRGEVKLNNYSLEAVADEVLRRKVPLVPTKTLNRWFATGPGRGRHRCIE 1071
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
YV RA LNLEI+NQLD++NRTSELARVFGIDFFSVLSRGSQ+RVESMLLRLAHTQNYLA
Sbjct: 1072 YVSSRAMLNLEIINQLDLVNRTSELARVFGIDFFSVLSRGSQFRVESMLLRLAHTQNYLA 1131
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
ISPGN QVASQPAMEC+PLVMEPES FY+DPV+VLDFQSLYPSM+IAYNLC+ TCLGK+
Sbjct: 1132 ISPGNQQVASQPAMECMPLVMEPESAFYSDPVLVLDFQSLYPSMIIAYNLCYSTCLGKVF 1191
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
PSK + LGVSS+ D H + DLK++LL+ PNGV+YV P+VRKGV+PRLLEEILSTRIMVK
Sbjct: 1192 PSKSSVLGVSSYSADPHTIADLKNQLLLTPNGVLYVQPEVRKGVVPRLLEEILSTRIMVK 1251
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
QA+KKLAPSQ++L +I NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR TL
Sbjct: 1252 QAMKKLAPSQKVLQKILNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRRTL 1311
Query: 1431 EKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
E AISFVN++ W A+V+YGDTD V +
Sbjct: 1312 ETAISFVNQHPLWNARVVYGDTDSMFVLL 1340
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 175/311 (56%), Gaps = 41/311 (13%)
Query: 8 SNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
S + SVRIVS+D+YMAPP+PG DI YS +V EVPVIR+YGSTPAGQKTCLH+H+AL
Sbjct: 15 SQVLSVRIVSLDYYMAPPVPGLDISYSPFHCEEVEEVPVIRIYGSTPAGQKTCLHVHQAL 74
Query: 68 PYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKK---- 123
PYLYVPC + + + + M + LEK L+ +G A KR+HVH CSLVRAKK
Sbjct: 75 PYLYVPCPEELLHNIERGNSCMTGLLSDLEKTLQNRGPA--KRRHVHGCSLVRAKKLYGY 132
Query: 124 --------------------------GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHL 157
GGAV D+ QP+ESHIP+LL FL+DYNLYGMGH+
Sbjct: 133 HSSEEIFVKIYLYYPHEVSRAATHLLGGAVLDRVFQPYESHIPYLLHFLIDYNLYGMGHV 192
Query: 158 HLSKLKFRHPVPDAFFPRKFNYSSKQASADFQVIGCGSYPMHLMGHQIKTLSGLNIKVFL 217
H++ KFR P+P F P+ K S+D SY + I T S + L
Sbjct: 193 HVTDFKFRPPLPGDFHPK--TPQRKVDSSDESEHKTHSYNAAVKNPIIWTSSTAPHALIL 250
Query: 218 SLKEMLQWMVCLIHCSATDIFASSIFLY---DDCVGDIVNQRLMMYTSLSQTRSDVKMVQ 274
+M S+++ F+ D V I+N++ MYTSLSQT +D KMVQ
Sbjct: 251 GDSSTSHFM----EGSSSNFRKRHTFMMLEADSRVEGIINEKYKMYTSLSQTTADTKMVQ 306
Query: 275 SLVPIWEVCSH 285
SL+ IWE H
Sbjct: 307 SLLAIWEELEH 317
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 71/107 (66%)
Query: 463 DTEALGLLKWLATSQAAEDLNSDDELLHETILSPLLPETTIDKVLEKANTDYERESQKEC 522
D+EALGLL W+A+SQA E+ +DDEL++E ILSPL + +I+ LE A+ D++ SQ+EC
Sbjct: 420 DSEALGLLSWMASSQAGEEPTTDDELVNEVILSPLFSKKSIEFALESAHLDFDSASQQEC 479
Query: 523 QDILDSIEDEVNVDGLEERNSSTVDPSNHPETSSHKKIPQIDGSSDD 569
QDILD++E + L + S P TS IPQIDGSSD+
Sbjct: 480 QDILDTLEHVTGAEELNAQKSYHSSPMLDGSTSVTNTIPQIDGSSDE 526
>gi|357121575|ref|XP_003562494.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Brachypodium
distachyon]
Length = 1720
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/652 (60%), Positives = 485/652 (74%), Gaps = 28/652 (4%)
Query: 819 GVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSSLKGSDIRP 878
GVPT + NDGS LY+L FSPPS +V +WL ++ D +EH P
Sbjct: 709 GVPTHFQNDGSALYLLTHAFSPPSAVAVDQWLPQQTFSSTFSGDD-EMEHI--------P 759
Query: 879 VLEEMHQEADEMISTEPTPDLN--------GVTAIMHNEGHIAEPNACADCLQDISQISG 930
H EA ++++ P P V + ++ + D D SQIS
Sbjct: 760 TFSP-HAEALPLMASSPVPRSASEHRAPKFAVDTVTMKPDLSSKESKQVDEWHDFSQISA 818
Query: 931 PDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN 990
+ K TPLSQIGF+DPAS G G+QLT+LSIEV ESRG+LRPDPR D+INVV+LA E+
Sbjct: 819 EAEKDKLTPLSQIGFRDPASTGGGQQLTILSIEVFTESRGELRPDPRLDAINVVSLAVED 878
Query: 991 DSDHAVEIYVLLYCKSE-SHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGW 1049
D+D VE+ VL+ +E +H+R+L GI C V V +E L H I ++CS DPDIL+GW
Sbjct: 879 DADSTVEVRVLIRGNNENTHRRNLDGIAGCTVDVFPEEKGLLKHLIDVICSIDPDILVGW 938
Query: 1050 DIQGGSLGFLAERAAHLGIGLLNDISRT-PLESKIAAGD-SEISERGITDNMLAEPVVAE 1107
+IQ SLGFLAERAAHLG+GLL ISRT P ESK D + S +G+ + A+ V+A+
Sbjct: 939 EIQLESLGFLAERAAHLGVGLLRRISRTLPHESKHPPRDLAHESSQGLPEASSADDVIAD 998
Query: 1108 SLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPS 1167
+ E+ W TH SG+HVGGRIVLN+WRLMR EVKLN+Y++EAVA+ VLRRK+P
Sbjct: 999 -------VNENAWSHTHVSGVHVGGRIVLNLWRLMRAEVKLNIYSLEAVADEVLRRKVPL 1051
Query: 1168 IPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVL 1227
+P ++L +WFA+GPGR R+RC++Y RA LNLEI+N+LD+INRTSELARVFGIDFFSVL
Sbjct: 1052 VPTKILKRWFATGPGRGRHRCIQYASSRAMLNLEIINKLDLINRTSELARVFGIDFFSVL 1111
Query: 1228 SRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDF 1287
SRGSQ+RVESMLLRLAHTQNYLAISPGN QVASQPAMECLPLVMEPES FY+DPV+VLDF
Sbjct: 1112 SRGSQFRVESMLLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESAFYSDPVLVLDF 1171
Query: 1288 QSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVP 1347
QSLYPSM+IAYNLC+ TCLGK+ PSK N LGVS++ D H + DLK++LL+ PNGV+YV
Sbjct: 1172 QSLYPSMIIAYNLCYSTCLGKVFPSKSNVLGVSTYSADPHTIVDLKNQLLLTPNGVLYVQ 1231
Query: 1348 PKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAA 1407
P++RKGV+PRLLEEILSTRIMVKQA+KKL+PSQ++L +I NARQLALKLIANVTYGYTAA
Sbjct: 1232 PEIRKGVVPRLLEEILSTRIMVKQAMKKLSPSQKVLQKILNARQLALKLIANVTYGYTAA 1291
Query: 1408 GFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
GFSGRMPCAELADSIVQCGR TLE AISFVN++ W AKV+YGDTD V +
Sbjct: 1292 GFSGRMPCAELADSIVQCGRRTLETAISFVNQHPLWDAKVVYGDTDSMFVLL 1343
Score = 226 bits (575), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 170/307 (55%), Gaps = 43/307 (14%)
Query: 8 SNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
S + SVRIVS+D+YMAPP+PG+D YS +V EVPVIR+YGSTPAGQKTCLH+H+AL
Sbjct: 14 SQVLSVRIVSLDYYMAPPLPGFDFTYSPFHCEEVEEVPVIRIYGSTPAGQKTCLHVHQAL 73
Query: 68 PYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKK---- 123
PYLYVP + + + + M + LEKAL+V+G A KR+H+H CSLVRAKK
Sbjct: 74 PYLYVPYPEELLHNIERGNSCMTGLLSDLEKALQVRGPA--KRKHIHGCSLVRAKKLYGY 131
Query: 124 --------------------------GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHL 157
GAV ++ QP+ESHIP+LL FLVDYNLYGMGH+
Sbjct: 132 HSCEEIFVKIYLYYPHEVSRAATHLLDGAVLNRVFQPYESHIPYLLHFLVDYNLYGMGHV 191
Query: 158 HLSKLKFRHPVPDAFFP----RKFNYSSKQASADFQVIGCGSYPMHLMGHQIKTLSGLNI 213
H++ KFR P+PD F P RK + S + PM + + L +
Sbjct: 192 HVTDFKFRPPLPDDFHPNTLHRKVDSSVESEHKPHPGAAAMKNPMIWISSAVP--PALIL 249
Query: 214 KVFLSLKEMLQWMVCLIHCSATDIFASSIFLYDDCVGDIVNQRLMMYTSLSQTRSDVKMV 273
F + M I + + + D V I+N++ MYT LSQT +D KMV
Sbjct: 250 GSFSTSHSMEGSNPNFIRRHTSLMLEA-----DSVVEGIINEKHKMYTPLSQTTTDTKMV 304
Query: 274 QSLVPIW 280
QSL+ IW
Sbjct: 305 QSLLAIW 311
Score = 103 bits (258), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 95/170 (55%), Gaps = 13/170 (7%)
Query: 446 PGQKEPLIFGIDIPQATDTEALGLLKWLATSQAAEDLNSDDELLHETILSPLLPETTIDK 505
P Q+ +F + + D EALGLL W+A+SQAAE+ +DDEL++E ILSP + +I+
Sbjct: 403 PAQRTSQLFD-EHEKHLDAEALGLLSWMASSQAAEEPTTDDELINEPILSPFFSKKSIEV 461
Query: 506 VLEKANTDYERESQKECQDILDSIEDEVNVDGLEERNSSTVDPSNHP------ETSSHKK 559
LE A+ D++ SQ+ECQDILDS+E V G EE N+ T SNH TS +
Sbjct: 462 ALESAHLDFDSASQQECQDILDSVEP---VTGTEELNAQT---SNHSSSMLDDSTSVNNT 515
Query: 560 IPQIDGSSDDLYLLPCSGSSGNSSKKEIKSESIRSFQHQVPQDTWTNAAS 609
IPQ+DGS D+ P G + + + S +S + DT +S
Sbjct: 516 IPQVDGSCDENQKDPQEYDKGRAMPSQRDTSSYKSETEKNSHDTTDKESS 565
>gi|242046854|ref|XP_002461173.1| hypothetical protein SORBIDRAFT_02g042330 [Sorghum bicolor]
gi|241924550|gb|EER97694.1| hypothetical protein SORBIDRAFT_02g042330 [Sorghum bicolor]
Length = 1714
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/547 (69%), Positives = 446/547 (81%), Gaps = 18/547 (3%)
Query: 920 DCLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYD 979
D D SQIS + + K TPLSQIGF+DPAS G G+QLT+LS+EV ESRG+LRPDPR+D
Sbjct: 803 DEWHDFSQISAGNEKDKLTPLSQIGFRDPASIGGGQQLTILSMEVLTESRGELRPDPRFD 862
Query: 980 SINVVALAFENDSDHAVEIYVLLYC--KSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKI 1037
+IN V+LA E+D+D+ V+++V + C S+SH+R+L GI V V +E L ++FI
Sbjct: 863 AINAVSLAIEDDADNTVDVHVFI-CDNNSKSHRRNLDGIAGYNVDVFPEEKDLLNNFISA 921
Query: 1038 LCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLES-----KIAAGDSEISE 1092
+CS DPDIL+GW+IQ GSLGFLAERAA+LGIGLL ISRTP KI +S
Sbjct: 922 VCSIDPDILVGWEIQLGSLGFLAERAAYLGIGLLKRISRTPPHELNHPPKIPVDNS---- 977
Query: 1093 RGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYT 1152
+L+E A+ ++ D + E++W THASG+HVGGRIVLN+WRLMR EVKLN Y+
Sbjct: 978 ----SQVLSETSSADDII--DDVSENDWSHTHASGIHVGGRIVLNLWRLMRAEVKLNNYS 1031
Query: 1153 VEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRT 1212
+EAVA+ VLRRKIP IP R+L +WFA+GPGR R+RC+EY+ R ++NLEIMNQLD++NRT
Sbjct: 1032 LEAVADEVLRRKIPLIPSRILNRWFATGPGRGRHRCIEYISNRTRINLEIMNQLDLVNRT 1091
Query: 1213 SELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVME 1272
SELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN QVASQPAMECLPLVME
Sbjct: 1092 SELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECLPLVME 1151
Query: 1273 PESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDL 1332
PES FY DPVVVLDFQSLYPSM+IAYNLC+ TCLGK+ PSK N LGVSS+ D H L DL
Sbjct: 1152 PESAFYPDPVVVLDFQSLYPSMIIAYNLCYSTCLGKVFPSKSNVLGVSSYSADPHTLVDL 1211
Query: 1333 KDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
K++LL+ PNGV+YV PK+RKGVLPRLLEEILSTRIMVKQA+KKL+PSQQ+LHRIFNARQL
Sbjct: 1212 KNQLLLTPNGVLYVQPKIRKGVLPRLLEEILSTRIMVKQAMKKLSPSQQVLHRIFNARQL 1271
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDT 1452
ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR TLE AISFVN++ WKA+V+YGDT
Sbjct: 1272 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRRTLETAISFVNQHPLWKARVVYGDT 1331
Query: 1453 DRYTVCI 1459
D V +
Sbjct: 1332 DSMFVLL 1338
Score = 319 bits (818), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 243/729 (33%), Positives = 358/729 (49%), Gaps = 105/729 (14%)
Query: 8 SNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
S + SVRIVS+D+YMAPP+PG+ S G V EVPV+R+YGSTPAGQKTCLHIHR L
Sbjct: 16 SPVLSVRIVSLDYYMAPPLPGFGFSRSPFHGDGVEEVPVVRIYGSTPAGQKTCLHIHRVL 75
Query: 68 PYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVH-------ECSLV- 119
PY Y+PC + + ++ D Y+ + ALEKAL+ +G SKR+HVH C V
Sbjct: 76 PYFYIPCPEELLDNLEKGDSYITGLLSALEKALQARGP--SKRKHVHGSLNGKSYCEKVH 133
Query: 120 ------------------RAKK---GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
RA GAV +++ QP+ESHIP+LL FLVDYNLYGMGH+H
Sbjct: 134 YAIDFFDLVSRYYPHEVSRAASLVLSGAVSNRAFQPYESHIPYLLHFLVDYNLYGMGHIH 193
Query: 159 LSKLKFRHPVPDAFFPRKFNYSSKQASADFQVIGCGSYPMHLMGHQIKTLSGLNIKVFLS 218
+ KFR P+PD F P K + K S + ++ + + H TL + L
Sbjct: 194 VKDFKFRPPLPDDFHP-KSSLHRKAQSDNLEIKSPTVWISSTVSHS-STLGSSAPSLHLG 251
Query: 219 LKEMLQWMVCLIHCSATDIFASSIFLYDDCVGDIVNQRLMMYTSLSQTRSDVKMVQSLVP 278
+ S T +SS+ D + I+N++ MYTSLSQT D KMVQSL
Sbjct: 252 GTNL----------SFTIRQSSSMLEADSRIEGILNEKYKMYTSLSQTTEDTKMVQSLEA 301
Query: 279 IWEVCSHPIYKLFNIQYIYPLVNFTTFQEEYERTGINEAVMAPDPGKPRPQDVLRTLSLG 338
IWE E ER + + D G+P ++VL+ G
Sbjct: 302 IWE--------------------------ELERLRLLDETKYADLGRPLREEVLKDFLHG 335
Query: 339 LEFENVLMEMCG-EG-QETVSSFGNDFEVLKSVACATDEENLIKLGPANY-DYKDPEYLT 395
+++E+ L + EG VS+ + + + TD + +Y + D
Sbjct: 336 IKYESALSVLFSQEGPHHKVSTIEESERLERCLKSLTDIIGTVTFSQDDYCGHIDVGNSA 395
Query: 396 CLKEGKILSALAPQGLVHQEKISLMPSKGKDTCPELPFGGEIHSSEMVGAPGQKEPLIFG 455
++ GK ++L L +I + P + E P + + + E
Sbjct: 396 DVQNGKPNASLCSGSLEQNMQI-ISPERNS----EYPVSSSVPQRTLSQLSDEGE----- 445
Query: 456 IDIPQATDTEALGLLKWLATSQAAEDLNSDDELLHETILSPLLPETTIDKVLEKANTDYE 515
+ D EALGLL WLA+SQAAE+ +DDEL++E ILSPL + +I+ LE A+ D++
Sbjct: 446 ----KHVDAEALGLLSWLASSQAAEEPTTDDELINEVILSPLFAKKSIEVALESAHLDFD 501
Query: 516 RESQKECQDILDSIEDEVNVDGLEERN--SSTVDPSNHPETSS-HKKIPQIDGSSDDLYL 572
SQ+ECQDILDS++ V EE N +S +D +S K IPQ+DGSSD+
Sbjct: 502 SASQQECQDILDSVDP---VREAEEPNLHTSYLDSVKSSSAASLGKTIPQVDGSSDENPK 558
Query: 573 LPCSGSSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKCNVKKKLWGSLPFSVSEQFNKD 632
+ ++K + S S ++ + +ASK + LWGSLP S ++ + D
Sbjct: 559 VSQECDRSKVTRKAVVSPCYTSTKNP------SKSASKRAGTEHLWGSLPLSRKKRQHGD 612
Query: 633 IETVSCNISSLCVTEVKDHGATGSLVGNELGKSFDALEREDADAHDIKEATAVTGGSVRD 692
+ SC S ++ + S + + + + ++E + + ++ SVRD
Sbjct: 613 ADD-SC---SAMPSQKALSASNKSTIDKDYHDTIGSTDKESSRFLGVHDSVC---HSVRD 665
Query: 693 LMRRKRSYR 701
LMRR+RS+R
Sbjct: 666 LMRRRRSFR 674
>gi|414888041|tpg|DAA64055.1| TPA: hypothetical protein ZEAMMB73_677675 [Zea mays]
Length = 1602
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/650 (58%), Positives = 464/650 (71%), Gaps = 78/650 (12%)
Query: 815 GSLTGVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSSLKGS 874
G + GVPT + NDGS LY+L SPPS GA G
Sbjct: 649 GDVLGVPTHFQNDGSALYLLTHALSPPSA------------GAVGHW------------- 683
Query: 875 DIRPVLEEMHQEADEMISTEPTPDLNGVTAIMHNEGHIAEPNACADCLQDISQISGPDGR 934
+ Q++ I + T + +GV A E H S R
Sbjct: 684 --------LTQQSSSSIFSGYT-NYDGVAA-DKEEAH-----------------SSTLSR 716
Query: 935 SKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDH 994
+ PT ++ ++ A+ G+ LT ESRG+LRPDPR+D+IN V+LA E+D+D+
Sbjct: 717 NSPTRFTK---ENSANKMHGDVLT--------ESRGELRPDPRFDAINAVSLAIEDDADN 765
Query: 995 AVEIYVLLYCKS-ESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQG 1053
V+++V + + +SH+R+L GI C + V +E + ++ I +CS DPDIL+GW+IQ
Sbjct: 766 TVDVHVFIRGNNVKSHRRNLDGIAGCNINVFPEEKDVLNNLISAICSIDPDILVGWEIQL 825
Query: 1054 GSLGFLAERAAHLGIGLLNDISRTPLE----SKIAAGDSEISERGITDNMLAEPVVAESL 1109
GSLGFLAERAA+LGIGLL ISRTP E KI +S +L+E A+ +
Sbjct: 826 GSLGFLAERAAYLGIGLLKRISRTPHELNHPPKIPVDNSS--------QVLSETSSADDI 877
Query: 1110 LAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIP 1169
+ D + E++W THASG+HVGGRIVLN+WRLMR EVKLN Y++EAVA+ VLRRKIP IP
Sbjct: 878 I--DDVSENDWSHTHASGIHVGGRIVLNLWRLMRAEVKLNNYSLEAVADEVLRRKIPLIP 935
Query: 1170 FRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSR 1229
R+L +WFA+GPGR R+RC+EY+ RA++NLEIMNQ+D++NRTSELARVFGIDFFSVLSR
Sbjct: 936 SRILNRWFATGPGRGRHRCIEYISNRARINLEIMNQMDLVNRTSELARVFGIDFFSVLSR 995
Query: 1230 GSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQS 1289
GSQYRVESMLLRLAHTQNYLAISPGN QVASQPAMECLPLVMEPES FY DPVVVLDFQS
Sbjct: 996 GSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESAFYPDPVVVLDFQS 1055
Query: 1290 LYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPK 1349
LYPSM+IAYNLC+ TCLGK+ PSK + LGVSS+ D H L DLK++LL+ PNGV+YV P+
Sbjct: 1056 LYPSMIIAYNLCYSTCLGKVFPSKSDVLGVSSYSADPHTLVDLKNQLLLTPNGVLYVQPE 1115
Query: 1350 VRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGF 1409
+RKGVLPRLLEEILSTRIMVKQA+KKL+PSQQ+LHRIFNARQLALKLIANVTYGYTAAGF
Sbjct: 1116 IRKGVLPRLLEEILSTRIMVKQAMKKLSPSQQVLHRIFNARQLALKLIANVTYGYTAAGF 1175
Query: 1410 SGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
SGRMPCAELADSIVQCGR TLE AISFVN++ WKA+V+YGDTD V +
Sbjct: 1176 SGRMPCAELADSIVQCGRRTLETAISFVNQHPLWKARVVYGDTDSMFVLL 1225
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 207/451 (45%), Gaps = 78/451 (17%)
Query: 110 RQHVHECSLVRAKK---GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRH 166
R + HE S RA GAV ++S QP+ESHIP+LL FLVDYNLYGMGH+H+ KFR
Sbjct: 75 RYYPHEVS--RAASLVLSGAVSNRSFQPYESHIPYLLHFLVDYNLYGMGHIHVKNFKFRP 132
Query: 167 PVPDAFFPRKFNYSSKQASADFQVIGCGSYPMHLMGHQIKTLSGLNIKVFLSLKEMLQWM 226
P+P F P K + K S + ++ + I +S +L
Sbjct: 133 PLPVDFHP-KSSLRRKAQSDNLEINSPTVW----------------ISSTVSHSSILGSS 175
Query: 227 VCLIHCSATDI-FA----SSIFLYDDCV----GDIVNQRLMMYTSLSQTRSDVKMVQSLV 277
H T++ FA SS+ D V I+N++ MYTSLSQT D KMVQSLV
Sbjct: 176 APSHHLGGTNLSFAIRQSSSMLEADSRVEVPPSGILNEKYKMYTSLSQTTEDTKMVQSLV 235
Query: 278 PIWEVCSHPIYKLFNIQYIYPLVNFTTFQEEYERTGINEAVMAPDPGKPRPQDVLRTLSL 337
+WE R + E D G+P ++VL+
Sbjct: 236 AVWEELE--------------------------RLRLLEETKYADLGRPLREEVLKDFLH 269
Query: 338 GLEFENVLMEMCG-EG-QETVSSFGNDFEVLKSVACATDEENLIKLGPANY-DYKDPEYL 394
G+++E+ L + EG VS+ + + + TD + NY D
Sbjct: 270 GIKYESALSVLFSQEGPHHKVSTIEESERLERCLKSLTDIIGTVTFSQDNYCGNIDVGNS 329
Query: 395 TCLKEGKILSALAPQGLVHQEKISLMPSKGKDTCPELPFGGEIHSSEMVGAPGQKEPLIF 454
++ K ++L L +I + P + E P +H + + E
Sbjct: 330 ADVQNDKPDASLCSGSLEQNMQI-ISPERNS----EYPVSSSVHQRTLSQLSDKGE---- 380
Query: 455 GIDIPQATDTEALGLLKWLATSQAAEDLNSDDELLHETILSPLLPETTIDKVLEKANTDY 514
+ D EALGLL WLA+SQAAE+ ++DDEL +E ILSPL +I+ +E A D+
Sbjct: 381 -----KHLDAEALGLLSWLASSQAAEE-STDDELTNEVILSPLFANKSIEVAVESAQLDF 434
Query: 515 ERESQKECQDILDSIEDEVNVDGLEERNSST 545
+ SQ+ECQDILDS++ + +EE N T
Sbjct: 435 DSASQQECQDILDSVDP---IRAVEEPNIHT 462
>gi|224123192|ref|XP_002319017.1| predicted protein [Populus trichocarpa]
gi|222857393|gb|EEE94940.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/425 (81%), Positives = 371/425 (87%), Gaps = 24/425 (5%)
Query: 1035 IKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERG 1094
+ I+ SFDPDILMGWD+QGGSLGFLAERAAHLGIGLLN+ISRTP E+ I G+ E S +
Sbjct: 1 MAIIVSFDPDILMGWDVQGGSLGFLAERAAHLGIGLLNNISRTPSEANIDVGERENSGK- 59
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
DEWGRTHASG+HVGGR+VLNVWRLMRGEVKLNMYTVE
Sbjct: 60 -----------------------DEWGRTHASGVHVGGRVVLNVWRLMRGEVKLNMYTVE 96
Query: 1155 AVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSE 1214
AV E +LRRKIPSIP++VLTKWFASGPGRARYRC+EY++ RAKLNLEIMNQLDMINRTSE
Sbjct: 97 AVGEALLRRKIPSIPYKVLTKWFASGPGRARYRCIEYMIDRAKLNLEIMNQLDMINRTSE 156
Query: 1215 LARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPE 1274
LARVFGIDFFSVLSRGSQYRVESM LRLAHTQNYLAISPGN QVASQPAMECLPLVMEPE
Sbjct: 157 LARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPE 216
Query: 1275 SGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKD 1334
SGFYADPVVVLDFQSLYPSM+IAYNLCFCTCLG + PSK NTLGVSSF D VLRDLKD
Sbjct: 217 SGFYADPVVVLDFQSLYPSMIIAYNLCFCTCLGNVAPSKANTLGVSSFSTDPSVLRDLKD 276
Query: 1335 ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLAL 1394
++L+ PNG MYVP ++RKGVLPRLLEEILSTRIM+KQA+KKLAPSQQ+LHRIFNARQLAL
Sbjct: 277 KILLTPNGTMYVPSEIRKGVLPRLLEEILSTRIMLKQAMKKLAPSQQVLHRIFNARQLAL 336
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDR 1454
KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS VN NEKWKAKVIYGDTD
Sbjct: 337 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISLVNANEKWKAKVIYGDTDS 396
Query: 1455 YTVCI 1459
V +
Sbjct: 397 MFVLL 401
>gi|449522574|ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
Length = 1591
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/582 (61%), Positives = 443/582 (76%), Gaps = 18/582 (3%)
Query: 819 GVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSSLKGSDIRP 878
GVP Y NDGS +Y+L P SPPS +SV +WL +G D ++ ++L + +
Sbjct: 1013 GVPIHYRNDGSFMYILTPVNSPPSKNSVRQWLT-SGQGDEPLKDLLNISFAALGINLGKT 1071
Query: 879 VLEEMHQEADEMISTEPT--------PDLNG-VTAIMHN------EGHIAEPNACADCLQ 923
++++ ++ + S+ T P+ + T+ N G E ACA Q
Sbjct: 1072 LVDDRNKPLPQPASSSHTNIVTHGGLPNSSADETSFPENLEPVKSGGVTVEVRACASLSQ 1131
Query: 924 DISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINV 983
DISQISGPD SK TPLSQIGF+DPAS G +QLTLLS+EVQAE RGDLRPDP++D++ +
Sbjct: 1132 DISQISGPDEISKATPLSQIGFRDPASVGGIQQLTLLSVEVQAECRGDLRPDPQFDAVKM 1191
Query: 984 VALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDP 1043
+AL + DS E+ ++L K +S +R+ GI K+ V +E LF F+KI+ DP
Sbjct: 1192 IALTIQTDSGPVFEVVLILCTKIDSSKRNRYGI-GYKLLVHHEEKCLFQSFMKIIYLTDP 1250
Query: 1044 DILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEP 1103
DIL+GWDIQG SLG+LAERA+ LGI LLN ISRTP E+K+ GDS+ + I +N+++E
Sbjct: 1251 DILIGWDIQGSSLGYLAERASQLGINLLNKISRTPDEAKMLDGDSK-THTEIPENLVSEL 1309
Query: 1104 VVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRR 1163
V +S + +D IIEDEWGRTHASG+H+GGRIVLN+WRLMR EVKLN+YT+EAVAE VLRR
Sbjct: 1310 VDFDSTVVEDMIIEDEWGRTHASGIHIGGRIVLNLWRLMRNEVKLNIYTLEAVAEAVLRR 1369
Query: 1164 KIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDF 1223
K+P I RVLT+WF SGP +AR+RC+EY++ RAKLNL++++QLDMINRTSELARVFGI+F
Sbjct: 1370 KLPYIHHRVLTQWFNSGPRQARFRCIEYMMERAKLNLQLISQLDMINRTSELARVFGIEF 1429
Query: 1224 FSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVV 1283
FSVLSRGSQYRVESMLLRLAH+QNYLA+SPGN QVASQPAMECLPLVMEPESGFYADPVV
Sbjct: 1430 FSVLSRGSQYRVESMLLRLAHSQNYLAVSPGNLQVASQPAMECLPLVMEPESGFYADPVV 1489
Query: 1284 VLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGV 1343
VLDFQSLYPSM+IAYNLCFCTCLGK++PSK NTLGV S+ P+ VL +LKD++L PNGV
Sbjct: 1490 VLDFQSLYPSMIIAYNLCFCTCLGKVVPSKVNTLGVISYSPEQQVLNELKDQILFTPNGV 1549
Query: 1344 MYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR 1385
MYV PKVRKG+LPRLLEEIL TRIMVKQ +KKLAPSQ++L R
Sbjct: 1550 MYVTPKVRKGILPRLLEEILLTRIMVKQEMKKLAPSQKVLQR 1591
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 318/813 (39%), Positives = 434/813 (53%), Gaps = 122/813 (15%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M DSQ +S +FSVRIVSID+Y+APPIPG DI YSS QGGKVNEVPV+R+YGSTPAGQKTC
Sbjct: 1 MGDSQSESRVFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDG---YMHAISLALEKALKVKGSAGSKRQHVHECS 117
+H+H LPYLYVPC++I + L + G + +SLALEKALK+KG++GSKRQHVH +
Sbjct: 61 VHVHGVLPYLYVPCSEILLPLNDKGVGGEALGNNVSLALEKALKLKGNSGSKRQHVHGYN 120
Query: 118 LVRAKK------------------------------GGAVFDKSLQPHESHIPFLLQFLV 147
LVRAKK GAV +KS QP+ESHIPF+LQFLV
Sbjct: 121 LVRAKKLYGYHSSEELFIKIYLYYPQDITRAANLLLNGAVLEKSFQPYESHIPFVLQFLV 180
Query: 148 DYNLYGMGHLHLSKLKFRHPVPDAFFPRK-----FNYSSKQASADFQVIGC-GSYPMHLM 201
DYNLYGMG LHL KLKFRHPVPDA P K F Y + + D C S P
Sbjct: 181 DYNLYGMGLLHLVKLKFRHPVPDA--PGKKLDEIFRYMHENHAMDNP--NCMPSDPQADT 236
Query: 202 GHQIKTLSGLNIKVFLSLKEMLQWMVCLIHCSATDIFASSIFLY-----------DDCVG 250
++ + S V++S K WM +A D + + D V
Sbjct: 237 SNEAASTS----PVWISSKIPADWMWKF--PTAMDTLDDNGINFCKRQSVCELEGDVTVE 290
Query: 251 DIVNQRLMMYTSLSQTRSDVKMVQSLVPIWEVCSHPIYKLFNIQYIYPLVNFTTFQEEYE 310
DI+NQ +YTS SQ SDVKMVQSLV IWE EY
Sbjct: 291 DILNQHSKLYTSFSQNHSDVKMVQSLVSIWE--------------------------EYR 324
Query: 311 RTGINEAVMAPDPGKPRPQDVLRTLSLGLEFENVLMEMCGEGQE--TVSSFGNDFEVLKS 368
RTG+ EA + PDPGKP ++VL T S G+++E L E+ + ++ D +++S
Sbjct: 325 RTGVQEAPLPPDPGKPLAKEVLETFSPGMDYEKKLTELYERPKSPSVLTPLEKDQRLVQS 384
Query: 369 VACATDEENLIKLGPANYDYKDPEYLTCLKE-GKILSALAPQGLVHQEKISLMPSKGKDT 427
+ + E N+ ++G + + E+L ++E G+ S L E M ++G++
Sbjct: 385 LTSSVKEANITRVGCS-----EGEFLKHVEETGRTNSDLFFASSF--EDYDKMLTEGENV 437
Query: 428 CPELP----------------FGGEIHSSEMVGAPGQKEPLIFGIDIPQ-ATDTEALGLL 470
P L F H+ + + F I + A D EALGLL
Sbjct: 438 VPRLSMDEVQATPKGCGVSSVFRSNSHNLRRIDKLLLVLTVFFLHYIQRGAVDEEALGLL 497
Query: 471 KWLATSQAAEDLNSDDELLHETILSPLLPETTIDKVLEKANTDYERESQKECQDILDSIE 530
+WLATSQAA+D+NSDDELL ETIL PLLP +D+VLE+A+ DY ESQKECQDILDS+E
Sbjct: 498 RWLATSQAAQDINSDDELLCETILGPLLPAANMDQVLERASQDYGSESQKECQDILDSVE 557
Query: 531 DEVNVDGLEERNSST--VDPSNHPETSSHKKIPQIDGSSDDLYLLPCSGSSGNSSKKEIK 588
D +DG E N + D + +SS + IPQ+DG++DD++ GS+ N+ +++
Sbjct: 558 D---LDGFEGFNKTKCCTDDEHFFRSSSEETIPQLDGAADDMF-SSSGGSTENTPDRDLN 613
Query: 589 SESIRSFQHQVPQDTWTNAASKCNVKKKLWGSLPFSVSEQFNKDIETVSCNISSLCVTEV 648
E+ RS + + + + +K WGSLPF +E+ N D V+ + +
Sbjct: 614 VENERSSKLAILLHDIDSGSCSRKKEKSFWGSLPFHEAEKVNTDSRCVNSCRPGIYTSST 673
Query: 649 KDHGATGSLVGNELGKSFDALEREDADAHDIKEATAVTGGSVRDLMRRKRSYR-ESSECE 707
KD G + G+ L+ D ++ +E SVRDLMRRKR+YR E +C
Sbjct: 674 KDSEFVSCFSGEDGGQVDVTLQNADTSTYNSREGHLFVERSVRDLMRRKRNYRSEPLDCG 733
Query: 708 PPRVKRVNVTGEQKNALSMCEKQLEFDTLQNDE 740
+ V QK + + L+ + L+++E
Sbjct: 734 YGKANNFTVDSRQKKVV--LSRDLDSEVLRSNE 764
>gi|302783240|ref|XP_002973393.1| hypothetical protein SELMODRAFT_413713 [Selaginella moellendorffii]
gi|300159146|gb|EFJ25767.1| hypothetical protein SELMODRAFT_413713 [Selaginella moellendorffii]
Length = 1656
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/1009 (41%), Positives = 560/1009 (55%), Gaps = 120/1009 (11%)
Query: 457 DIPQATDTEALGLLKWLATSQAAE---DLNSDDELLHETI-LSPLLPETTIDKVLEKANT 512
D+ +A D +AL LLKW+ +SQ D+ + +E H I L L ++ L+K +
Sbjct: 393 DLWKAADEDALELLKWMVSSQNNNCEGDVVAANEQDHGEIDLCRLFEGDGVEAALQKTLS 452
Query: 513 DYERESQKECQDILDSIEDEVNVDGLEERNSSTVDPSNHPETSSHKKIPQIDGSSDDLYL 572
+E SQ+ECQDI+D E+ DG EE+ + E +S +IPQ DG+ D+
Sbjct: 453 TFEIMSQRECQDIVDCFEE----DG-EEKEVLVAE-----EGTSGIRIPQYDGAGDE--- 499
Query: 573 LPCSGSSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKCNVKKKLWGSLPFSVSEQFNKD 632
+ P D V + WG LP +V K
Sbjct: 500 -------------------------EPPADVTETGK---RVGNRSWGRLPITVKGSPAKP 531
Query: 633 IETVSCNISSLCVTEVKDHGATGSLVGNELGKSFDALEREDADAHDIKEATAVTGGSVRD 692
G E L + +E+ + T SVRD
Sbjct: 532 --------------------------GKEEASVAVPLRPCGSPQEQARESRSET--SVRD 563
Query: 693 LMRRKRSYRESSECEPPRVKR-VNVTG------EQKNALSMCEKQLEFDTLQNDECEKCP 745
LMR KR ++ + P + V G Q AL + + + E
Sbjct: 564 LMRIKRGKQKGGRQQEPETESAVKPQGLRKCLLNQYGALPLQSHMTTEPVETSGDNENSQ 623
Query: 746 LKGGTGISTVCKENMESPSPFDTKKEDASVSVGDWKADNCKESKFDATSVEPRELQSDHP 805
V +N E F + + + +K+ K+ ++ S +
Sbjct: 624 PAAAVEKDVVLPKNGELAMIFHQRPPSNNDILASFKSYGLKDVEYPNVS---------YG 674
Query: 806 NNNDSNLNQGSLTGVPTLYLN-DGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKA 864
+ D + G P + D + +++L P +PPS SV +WL ++ A + K
Sbjct: 675 GSEDMEKSAAIFAGDPARRFDIDDTVIHLLTPALAPPSNSSVCEWLAKENL-ALNSLQKE 733
Query: 865 SVEHS--SLKGSDIRPVLEEMHQEADEMISTEPTPDLNGVTAIMHNEGHIAEPNACADCL 922
V + + G P EMH +DE S E H+ +
Sbjct: 734 HVASTLETPSGRPASPKYNEMHVLSDEFQSGE------------HSNTTLEGSAEAKRRS 781
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
+D SQI+GP + TP SQ GF+DPA+AGAG+Q+T++SIE AE+RG LRPDP YDSI
Sbjct: 782 RDFSQITGPSLAAHRLTPASQTGFRDPAAAGAGQQVTVMSIEALAETRGSLRPDPHYDSI 841
Query: 982 NVVALAFENDSDHAVEIYVLLYCKS-ESHQRSLVGI---PDCKVFVCSKEIHLFSHFIKI 1037
+ +A+ +D++ E L++ K + +R G+ P+ F E+ L FI++
Sbjct: 842 SCIAIVVADDTETTRETIALIHDKELQDGKRPSDGLSCSPNTSYF--PTEVALLQFFIEL 899
Query: 1038 LCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITD 1097
+ ++DPDI++GW+IQ SLGFLAERAA+LG+GLL ISRTP S + S G
Sbjct: 900 VRAYDPDIIIGWEIQRLSLGFLAERAANLGVGLLASISRTPPRSGHNSLSSTFFSDGEKT 959
Query: 1098 NMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVA 1157
+AE A II+DEWGRTH SG++VGGR VLN+WR+MRGEVKL+ YT+E V
Sbjct: 960 GGIAE--------ANKTIIQDEWGRTHGSGIYVGGRTVLNLWRIMRGEVKLSNYTIECVG 1011
Query: 1158 ETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELAR 1217
E VL+RK+P I +R LTKWFASG G R+R VEY++ R LNL+I++QLD++NRT+ELAR
Sbjct: 1012 EEVLKRKVPRISWRDLTKWFASGAGGNRFRSVEYLINRTALNLQILDQLDIVNRTAELAR 1071
Query: 1218 VFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGF 1277
VFGIDF+SV SRGSQYRVESM++RLAH+QN+LAISP QVA+QPAMECLPLV+EPES
Sbjct: 1072 VFGIDFYSVFSRGSQYRVESMMMRLAHSQNFLAISPSKEQVAAQPAMECLPLVLEPESKL 1131
Query: 1278 YADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELL 1337
Y PVVVLDFQSLYPSM+IAYNLCF TCLGK + LGV+ +LR L D+L+
Sbjct: 1132 YTSPVVVLDFQSLYPSMIIAYNLCFSTCLGKCISLNPKVLGVTKLWIPPSLLRSLVDKLI 1191
Query: 1338 IPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLI 1397
+ PNG+M+VPP++ GVLPRLL EILSTRIMVK +KKL SQ++LHRIFNARQ ALKLI
Sbjct: 1192 VTPNGIMFVPPEIAPGVLPRLLLEILSTRIMVKGKMKKLDASQRVLHRIFNARQFALKLI 1251
Query: 1398 ANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAK 1446
ANVTYGY AAGFSGRMPCAELADSIVQ GR TLE+AI+ VN N W+ +
Sbjct: 1252 ANVTYGYAAAGFSGRMPCAELADSIVQLGRHTLEQAINMVNSNPAWEGR 1300
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/312 (38%), Positives = 162/312 (51%), Gaps = 40/312 (12%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
MA+ + +F +RIV++D+Y A P+ D CYS G V EVPV+R+YGST AGQKTC
Sbjct: 1 MAELEEGERVFGIRIVNLDYYTAAPLVDMDECYSHFFGRSVMEVPVVRIYGSTLAGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVR 120
LH+H+ALPY YVP D Q +E ++ ++LALE+A+K+ S G+KRQHVH C LVR
Sbjct: 61 LHLHKALPYFYVPYDDDLPQSLEEAMAFVRRLALALERAMKMASSIGAKRQHVHSCDLVR 120
Query: 121 AKK------------------------------GGAVFDKSLQPHESHIPFLLQFLVDYN 150
AKK G + ++ QP+E+HIP+LLQ +DYN
Sbjct: 121 AKKLYGYHPSEDTFIKITLYYPQEASQMSAFLLSGGILNRKFQPYEAHIPYLLQLKIDYN 180
Query: 151 LYGMGHLHLSKLKFRHPVPDAFFPRKFNYSSKQASADFQVIGCGSYPMHLMGHQIKTLS- 209
L GMG L +S L+FR P+PD RK S+ A GS+ + I
Sbjct: 181 LAGMGLLEVSSLRFRSPLPDTPNERKRKISALNTPA---AENDGSWFTSSSDYDIHDFWL 237
Query: 210 GLNIKVFLSLKEMLQWMVCLIHCSATDIFASSIFLYDDCVGDIVNQRLMMYTSLSQTRSD 269
NI ++ Q CS ++ A D V I+N+ + YT L Q
Sbjct: 238 SSNIPSHQVWSDLSQDKASPSRCSTCELEA------DAPVEAILNKDSLSYTPLEQIDPG 291
Query: 270 VKMVQSLVPIWE 281
+VQSL+PIWE
Sbjct: 292 RMLVQSLIPIWE 303
>gi|302789498|ref|XP_002976517.1| hypothetical protein SELMODRAFT_443228 [Selaginella moellendorffii]
gi|300155555|gb|EFJ22186.1| hypothetical protein SELMODRAFT_443228 [Selaginella moellendorffii]
Length = 2679
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/627 (54%), Positives = 430/627 (68%), Gaps = 30/627 (4%)
Query: 827 DGSCLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHS--SLKGSDIRPVLEEMH 884
D + +++L P +PPS SV +WL + K A + K V + + G P EMH
Sbjct: 684 DDTVIHLLTPALAPPSNSSVCEWLAKE-KLALNSLQKEHVASTLETPSGRPASPKYNEMH 742
Query: 885 QEADEMISTEPTPDLNGVTAIMHNEGHIAEPNACADCLQDISQISGPD-GRSKPTPLSQI 943
+DE S E H+ + +D SQI+GP + TP SQ
Sbjct: 743 VLSDEFQSGE------------HSNTTLEGSAEAKRRSRDFSQITGPSLAAHRLTPASQT 790
Query: 944 GFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLY 1003
GF+DPA+AGAG+Q+T++SIE AE+RG LRPDP YDSI+ +A+ +D++ E L++
Sbjct: 791 GFRDPAAAGAGQQVTVMSIEALAETRGSLRPDPHYDSISCIAIVVADDTETTRETIALIH 850
Query: 1004 CKS-ESHQRSLVGI---PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFL 1059
K + +R G+ P+ F E+ L FI+++ ++DPDI++GW+IQ SLGFL
Sbjct: 851 DKELQDGKRPSDGLSCSPNTSYFPT--EVALLQFFIELVRAYDPDIIIGWEIQRLSLGFL 908
Query: 1060 AERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE 1119
AERAA+LG+GLL ISRTP S + S G +AE A II+DE
Sbjct: 909 AERAANLGVGLLASISRTPPRSGHNSLSSTFFSDGEKTGGIAE--------ANKTIIQDE 960
Query: 1120 WGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFAS 1179
WGRTH SG++VGGR VLN+WR+MRGEVKL+ YTVE V E VL+RK+P I +R LTKWFAS
Sbjct: 961 WGRTHGSGIYVGGRTVLNLWRIMRGEVKLSNYTVECVGEEVLKRKVPRISWRDLTKWFAS 1020
Query: 1180 GPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESML 1239
G G R+R VEY++ R LNL+I++QLD++NRT+ELARVFGIDF+SV SRGSQYRVESM+
Sbjct: 1021 GAGGNRFRSVEYLINRTALNLQILDQLDIVNRTAELARVFGIDFYSVFSRGSQYRVESMM 1080
Query: 1240 LRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYN 1299
LRLAH+QN+LAISP QVA+QPAMECLPLV+EPES Y PVVVLDFQSLYPSM+IAYN
Sbjct: 1081 LRLAHSQNFLAISPSKEQVAAQPAMECLPLVLEPESKLYTSPVVVLDFQSLYPSMIIAYN 1140
Query: 1300 LCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLL 1359
LCF TCLGK + LGV+ +LR L D+L++ PNG+M+VPP++ GVLPRLL
Sbjct: 1141 LCFSTCLGKCISLNPKVLGVTKLWIPPSLLRSLVDKLIVTPNGIMFVPPEIAPGVLPRLL 1200
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
EILSTRIMVK +KKL SQ++LHRIFNARQ ALKLIANVTYGY AAGFSGRMPCAELA
Sbjct: 1201 LEILSTRIMVKGKMKKLDASQRVLHRIFNARQFALKLIANVTYGYAAAGFSGRMPCAELA 1260
Query: 1420 DSIVQCGRSTLEKAISFVNENEKWKAK 1446
DSIVQ GR TLE+AI+ VN N W+ +
Sbjct: 1261 DSIVQLGRHTLEQAINMVNSNPAWEGR 1287
Score = 203 bits (516), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 158/290 (54%), Gaps = 24/290 (8%)
Query: 7 DSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+ +F +RIV++D+Y A P+ D CYS G V EVPV+R+YGST AGQKTCLH+H+A
Sbjct: 10 EERVFGIRIVNLDYYTAAPLVDMDECYSHFFGRSVMEVPVVRIYGSTLAGQKTCLHLHKA 69
Query: 67 LPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKK--- 123
LPY YVP D Q +E ++ ++LALE+A+K+ + G+KRQHVH C LVRAKK
Sbjct: 70 LPYFYVPYDDDLPQSLEEAMAFVRRLALALERAMKMASAIGAKRQHVHSCDLVRAKKYYP 129
Query: 124 -----------GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDAF 172
G + ++ QP+E+HIP+LLQ +DYNL GMG L +S L+FR P+PD
Sbjct: 130 QEASQMSAFLLSGGILNRKFQPYEAHIPYLLQLKMDYNLAGMGLLEVSSLRFRSPLPDTP 189
Query: 173 FPRKFNYSSKQASADFQVIGCGSYPMHLMGHQIKTLS-GLNIKVFLSLKEMLQWMVCLIH 231
RK S+ A GS+ + I NI ++ Q
Sbjct: 190 NERKRKISALNTPA---AENDGSWFTSSSDYDIHDFWLSSNIPSHQVWSDLSQDKASPSR 246
Query: 232 CSATDIFASSIFLYDDCVGDIVNQRLMMYTSLSQTRSDVKMVQSLVPIWE 281
CS ++ D V I+N+ + YT L Q +VQSL+PIWE
Sbjct: 247 CSTCELEV------DATVEAILNKDSLSYTPLEQIDPGRMLVQSLIPIWE 290
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 20/120 (16%)
Query: 457 DIPQATDTEALGLLKWLATSQAAEDLNSDDELLH-------ETILSPLLPETTIDKVLEK 509
D+ +A D +AL LLKW+ +SQ D NS+ +++ E L L ++ L+K
Sbjct: 380 DLWKAADEDALELLKWMVSSQ---DNNSEGDVIAANEQDHGEIDLCRLFEGDGVEAALQK 436
Query: 510 ANTDYERESQKECQDILDSIEDEVNVDGLEERNSSTVDPSNHPETSSHKKIPQIDGSSDD 569
+ +E SQ+ECQDI+D E+ DG EE+ + E +S +IPQ DG+ D+
Sbjct: 437 TLSTFEIMSQRECQDIVDCFEE----DG-EEKEVLVAE-----EDTSGIRIPQYDGAGDE 486
>gi|357511977|ref|XP_003626277.1| DNA polymerase [Medicago truncatula]
gi|355501292|gb|AES82495.1| DNA polymerase [Medicago truncatula]
Length = 1096
Score = 504 bits (1299), Expect = e-139, Method: Compositional matrix adjust.
Identities = 340/835 (40%), Positives = 447/835 (53%), Gaps = 173/835 (20%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M+DS+ +S++FSVRIVS+DHYMA PIP DI +S+ GKVNEVPVIRVYGSTPAGQKTC
Sbjct: 1 MSDSESNSDVFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTC 60
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVR 120
LHIH ALPYLYV C+DIP+QL QE D Y + ++ +LEKALK+KGSA S RQHVH CSLVR
Sbjct: 61 LHIHGALPYLYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLKGSADSSRQHVHGCSLVR 120
Query: 121 AKK----------------------------------------GGAVFDKSLQPHESHIP 140
AKK GAV +KSLQPHESHIP
Sbjct: 121 AKKFYGYCSFEEFFVKIYLYPDVLHILHKYYPQDVSRAANLLLAGAVLNKSLQPHESHIP 180
Query: 141 FLLQFLV------------------DYNLYGMGHLHLSKLKFRHPVPDAFFPRKFNYSSK 182
F+LQFLV DYNLYGMGHLHLSK++FRHP+PD+ +K + +S+
Sbjct: 181 FILQFLVCTLIRGLGITETYYSLCVDYNLYGMGHLHLSKMRFRHPMPDSIH-KKSDINSQ 239
Query: 183 QASADFQVIGCGSYPMHLMGHQIKTLSGLNIKVFLSLKEMLQWMVCLIH---CSATDIFA 239
AD C L K+++S WM L S+ D
Sbjct: 240 HRKADPGAEAC-----------------LESKIWMSSTISFDWMWSLPSESGGSSNDNTH 282
Query: 240 S----SI--FLYDDCVGDIVNQRLMMYTSLSQTRSDVKMVQSLVPIWEVCSHPIYKLFNI 293
S SI D V +I+NQ+ M++SLSQT S+V MVQSLV IWE
Sbjct: 283 SPKRQSICELEGDISVDEILNQQFKMFSSLSQTSSNVNMVQSLVSIWE------------ 330
Query: 294 QYIYPLVNFTTFQEEYERTGINEAVMAPDPGKPRPQDVLRTLSLGLEFENVLMEMCGEGQ 353
E+ +R+GI+EA M D GKP P+DV++ LS GL+FE L+++C E
Sbjct: 331 -------------EQRKRSGIHEATMLSDSGKPLPEDVMKLLSSGLDFEKKLIQLCSESD 377
Query: 354 ETVSSFGNDFEVLKSVACATDEENLIKLGPANYDYKDPEYLTCLKEGKIL-SALAPQGLV 412
T+S C E+ L +E I+ SA P L
Sbjct: 378 TTLS-------------CTPFEKEL-------------------RETDIIGSASPPASLC 405
Query: 413 HQEKISLMPSKGKDTCPELPFGGEIHSSE---MVGAPGQKEPLIFGIDIP---------- 459
K + +G DT +L G++ S+E M+ IF + I
Sbjct: 406 ENAK---LLEEGTDTSLKLLKIGQMQSAEKIEMLDIKAIAFSSIFLLCISTHFRYNSYLF 462
Query: 460 ---------QATDTEALGLLKWLATSQAAEDLNSDDELLHETILSPLLPETTIDKVLEKA 510
+ D EA LLKWLATSQAAED+NSDDEL ETILSPL P TIDK+LEKA
Sbjct: 463 FNSITFFRSRDADMEAQNLLKWLATSQAAEDINSDDELACETILSPLPPAATIDKMLEKA 522
Query: 511 NTDYERESQKECQDILDSIEDEVNVDGLEERNSSTVDPSNHPETSSHKKIPQIDGSSDDL 570
N YE ESQ+ECQDILDSI+D + +D +++ S + D + E SS IPQ+DGS+DD
Sbjct: 523 NMAYESESQQECQDILDSIDDMLALDLPKKKPSRSFDHNCPIEASSDNMIPQVDGSNDDE 582
Query: 571 YLLPCSGSSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKCNVKKKLWGSLPFSVSEQFN 630
+ PC+ + SS EI SE R+ ++ + +T T+ + + + + WGSLPFS++ + N
Sbjct: 583 FSSPCASLAEISSAVEINSEYKRASENHLLHNTDTSTVN-TDKRNRQWGSLPFSMTGKVN 641
Query: 631 KDIETVSCNISSLCVTEVKDHGATGSLVGNELGKSFDALEREDAD-AHDIKEATAVTGGS 689
D E + ++ L E +D + L NE+ K+ ++R + A D KE ++ S
Sbjct: 642 NDGEHATSQVAHLFERETEDSSLSDYLTRNEI-KNNKYIKRNVGEGASDSKEVHSLVNCS 700
Query: 690 VRDLMRRKRSYR-ESSECEPPRVKRVNVTGEQKNALSMCEKQLEFDTLQNDECEK 743
+RDLMRRKRSYR E E E K++N+ + K LE +T+Q DE EK
Sbjct: 701 LRDLMRRKRSYRVEHDERESGTAKKLNLDRHGGTKTCLWPK-LELETMQTDEVEK 754
Score = 48.5 bits (114), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 819 GVPTLYLNDGSCLYMLRPPFSPPSVDSVHKWLLHDDKG 856
GV T Y NDGS LY+L P PPS SV +WL D++G
Sbjct: 1055 GVSTYYQNDGSHLYLLTPNILPPSAGSVQRWLFCDERG 1092
>gi|384253877|gb|EIE27351.1| DNA polymerase zeta [Coccomyxa subellipsoidea C-169]
Length = 778
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/445 (53%), Positives = 294/445 (66%), Gaps = 37/445 (8%)
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIG--LLNDISRTPLE 1080
V E L + + + DPDIL+G+++Q GSLG+L +RA L LL +SRTP
Sbjct: 3 VHGSEEALLDALVGAVRALDPDILVGYEVQQGSLGYLNDRATTLARPEPLLRQLSRTPTV 62
Query: 1081 SKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWR 1140
S S + R DE+G HASG+HV GRIVLN+WR
Sbjct: 63 S------SMVERR-----------------------NDEYGVLHASGIHVAGRIVLNLWR 93
Query: 1141 LMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNL 1200
L+R E+KL +YT EA VL+ + P IP VL++WF GPG R+RCV+Y+V RA+L+L
Sbjct: 94 LLRSELKLRIYTFEACVAAVLQLRTPHIPAWVLSQWFQGGPGGGRWRCVQYIVRRARLSL 153
Query: 1201 EIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVAS 1260
+M QLD+ RT E+AR FGIDFFSVL+RGSQYRVE+M+ RLAHTQNYL +P Q +
Sbjct: 154 AMMEQLDITGRTGEMARTFGIDFFSVLTRGSQYRVEAMMARLAHTQNYLLPAPSTEQTKN 213
Query: 1261 QPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT---- 1316
QPAME +PLVMEPES Y DPVVVLDFQSLYPS +IAYNLCF TCLG+ +
Sbjct: 214 QPAMEAIPLVMEPESRLYVDPVVVLDFQSLYPSQIIAYNLCFSTCLGRPAHAAAAATPLR 273
Query: 1317 LGVSSFRPDLHVLRD--LKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
LG F L D+L++ PNGV Y PP+ R+GVLPRLL EIL+TRIMVK A+K
Sbjct: 274 LGAQVFGLPKGSLSGAVAPDKLIVAPNGVAYAPPEARQGVLPRLLNEILATRIMVKAAMK 333
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
+ + ++L RI NARQ +LKLIANVTYGYTAAGFSGRMPCAELADSIVQ GR TLE I
Sbjct: 334 RAPKTAKVLQRILNARQFSLKLIANVTYGYTAAGFSGRMPCAELADSIVQSGRETLENTI 393
Query: 1435 SFVNENEKWKAKVIYGDTDRYTVCI 1459
V + +W+A+V+YGDTD V +
Sbjct: 394 RMVEAHPEWRARVVYGDTDSLFVLL 418
>gi|159472581|ref|XP_001694423.1| DNA polymerase zeta [Chlamydomonas reinhardtii]
gi|158276647|gb|EDP02418.1| DNA polymerase zeta [Chlamydomonas reinhardtii]
Length = 729
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 292/440 (66%), Gaps = 36/440 (8%)
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIG--LLNDISRTPLESKIA 1084
E L F L S DPD++ GWD+Q SLG+LAERAA LG+ LL RTP
Sbjct: 2 EPSLLRAFAAALSSLDPDVVCGWDVQRHSLGYLAERAAALGLAPPLLRAAGRTP------ 55
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
G S + ER DEWG HASG HV GR++LN+WR++RG
Sbjct: 56 -GTSSVKERQ----------------------NDEWGALHASGFHVTGRVLLNLWRVLRG 92
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
E+KL YT E+ A VL ++P + + L WFA+GP R+R + ++ R +L L +
Sbjct: 93 ELKLGSYTFESCAAAVLGLRVPRVREQQLALWFAAGPSAGRWRTLSWLCRRCRLQLAMAE 152
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
QLD++ RT+E+AR FGIDFFSVLSRGSQYRVES+L+RLAHT NY+ +P QV QPAM
Sbjct: 153 QLDLVGRTAEMARTFGIDFFSVLSRGSQYRVESLLVRLAHTNNYIMPTPSREQVGGQPAM 212
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN----TLGVS 1320
E LPLVMEPES YA PVVVLDFQSLYPS +IAYNLC+ TC+G+ + ++ LGV+
Sbjct: 213 EALPLVMEPESRMYASPVVVLDFQSLYPSQVIAYNLCYSTCVGRPMHARAGGTPVRLGVT 272
Query: 1321 SFR-PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPS 1379
+ P ++L+I PNGV YV P+VR GVLPR+L EIL TR+M+K A+KK+ P
Sbjct: 273 QYSYPAPAAGTATPEDLVISPNGVAYVSPQVRPGVLPRMLREILDTRVMIKGAMKKVPPE 332
Query: 1380 QQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE 1439
++L R+ NARQ LK+IANV+YGYTAAGFSGRMP AELAD+IVQ GR TLE AI+ V
Sbjct: 333 DKVLLRVLNARQFGLKMIANVSYGYTAAGFSGRMPFAELADAIVQSGRQTLENAIAMVES 392
Query: 1440 NEKWKAKVIYGDTDRYTVCI 1459
+ +W+A+V+YGDTD V +
Sbjct: 393 HPEWRARVVYGDTDSMFVLL 412
>gi|255086906|ref|XP_002505376.1| predicted protein [Micromonas sp. RCC299]
gi|226520646|gb|ACO66634.1| predicted protein [Micromonas sp. RCC299]
Length = 768
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/445 (53%), Positives = 293/445 (65%), Gaps = 50/445 (11%)
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSE 1089
L FI + SFDPD++ G++IQG SLG+LAERAA L IGLL +ISR E + A + +
Sbjct: 3 LLRGFINTVRSFDPDVIAGFEIQGSSLGYLAERAAVLNIGLLREISRD--ERRPGAAERQ 60
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
+DE+GR HASG+HV GRIV+N+WR +RGE+KL
Sbjct: 61 ---------------------------DDEYGRLHASGIHVTGRIVINLWRTLRGELKLQ 93
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWF-----ASGPG----RARYRCVEYVVGRAKLNL 1200
YT+E+ A VLRR++P P + L +W A GPG R+R + + R+ +
Sbjct: 94 SYTLESCAHAVLRRRLPCFPAKTLARWARGGDSAIGPGVGIAHQRWRAIRHATSRSNITA 153
Query: 1201 EIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVAS 1260
+M QLD++ RT+E AR+FGIDFFSVLSRGSQYRVESMLLRLAHTQNY+ ISP QVA
Sbjct: 154 RMMEQLDLVARTAEQARIFGIDFFSVLSRGSQYRVESMLLRLAHTQNYVMISPNKEQVAR 213
Query: 1261 QPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVS 1320
QPAMECLPLVMEPES Y DPV VLDFQSLYPSM+IAYNLC+ TC+G++ + G S
Sbjct: 214 QPAMECLPLVMEPESKMYDDPVAVLDFQSLYPSMVIAYNLCYSTCMGRVPRDVDGGDGGS 273
Query: 1321 SFRPDLHVLRDLKDELL------------IPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
+L + R L L+ PNGVM+ P R GVLPRLL EIL TR+M
Sbjct: 274 LGVAELALPRGLLPSLVNGDGSEAPPGVTCAPNGVMFAPHSARPGVLPRLLTEILDTRVM 333
Query: 1369 VKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
VKQA+K+ Q+ R NARQ LKLIANVTYGYTAAGFSGRMP AELAD+IVQ GR
Sbjct: 334 VKQALKRTPADQRARRRALNARQFGLKLIANVTYGYTAAGFSGRMPMAELADAIVQSGRE 393
Query: 1429 TLEKAISFVNENEKWKAKVIYGDTD 1453
TLE+AI V+ N +W A+V+YGDTD
Sbjct: 394 TLERAIQTVHSNPRWGARVVYGDTD 418
>gi|303280714|ref|XP_003059649.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458304|gb|EEH55601.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 793
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/474 (49%), Positives = 290/474 (61%), Gaps = 76/474 (16%)
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E L FI + + DPD+L G++IQG S+G+L +RAA LGIGLL D+SR AA
Sbjct: 2 ERALLRGFIAHVLARDPDVLCGFEIQGASVGYLRDRAAKLGIGLLRDVSR-------AAS 54
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
+ER +DE+GR HASGLHV GRIV+N+WR++R E+
Sbjct: 55 LPGAAERQ----------------------DDEYGRLHASGLHVTGRIVINLWRVLRTEL 92
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKW-------------------------FASGP 1181
KL YT+EA A VLRR++P R L++W +
Sbjct: 93 KLQSYTMEACARAVLRRRLPRFTHRTLSRWACANDDDFNGFNGGGGGGGNNGTTTVVAAA 152
Query: 1182 GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLR 1241
R+R +++ RA + ++ QLD++ RTSE AR+FGIDFFSVLSRGSQYRVESMLLR
Sbjct: 153 AHQRWRAIDHASSRAVVVARMLEQLDLVARTSEQARIFGIDFFSVLSRGSQYRVESMLLR 212
Query: 1242 LAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLC 1301
LAHTQNYLA+SP QVA QPAMECLPLVMEPES Y+DPV VLDFQSLYPSM+IAYNLC
Sbjct: 213 LAHTQNYLAVSPSKEQVARQPAMECLPLVMEPESKMYSDPVAVLDFQSLYPSMVIAYNLC 272
Query: 1302 FCTCLGK-----------ILPSKENTLGVSSFRPD-LHVLRDLKDE----------LLIP 1339
F TCLG+ + +K L + P L L +L +
Sbjct: 273 FSTCLGRAPRESPPERHLVDAAKLGVLDAFALAPGVLPSLVELGARGGGGGGGGGGVYCA 332
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIAN 1399
PNG ++ P R GVLPRLL EIL TR+MVK A+K+ S + R NARQ+ LKLIAN
Sbjct: 333 PNGAVFATPSARPGVLPRLLTEILDTRVMVKAALKRAPASAKARKRALNARQIGLKLIAN 392
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
VTYGY AAGFSGRMP AELAD+IVQCGR TLE+AI V+ N W +V+YGDTD
Sbjct: 393 VTYGYAAAGFSGRMPMAELADAIVQCGRDTLERAIRMVHANPAWNCRVVYGDTD 446
>gi|395534778|ref|XP_003769414.1| PREDICTED: DNA polymerase zeta catalytic subunit [Sarcophilus
harrisii]
Length = 3136
Score = 438 bits (1126), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/558 (42%), Positives = 334/558 (59%), Gaps = 51/558 (9%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2268 KETSQIEGPSLNNTYGFKVSVQNLQEAKALHENQNLTLISVELHARTRRDLEPDPEFDPI 2327
Query: 982 NVVALAFENDSDHAV------EIYVLLYCKSES--------HQRSLV---GIPDCKVFVC 1024
AL + SD A+ E+ ++ +S +Q L+ GI +V
Sbjct: 2328 --CALFYCISSDTALPDTDKTELTGVIVIDKDSTISSQGIRNQTPLLIRSGISRLEVTYA 2385
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
+ E LF + I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2386 ADEKALFQEIVNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP------ 2439
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
D +I R T+ DE+G S +++ GRI LN+WR+MR
Sbjct: 2440 --DDKIENRFATE-------------------RDEYGSDTMSEINIVGRITLNLWRIMRN 2478
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
EV L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++
Sbjct: 2479 EVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLE 2538
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
QLD+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q A A
Sbjct: 2539 QLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRAQMRAP 2598
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSS 1321
+C+PL+MEPES FY++ ++VLDFQSLYPS++IAYN CF TCLG + E G +S
Sbjct: 2599 QCVPLIMEPESRFYSNSILVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEFKFGCTS 2658
Query: 1322 FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
R +L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K +
Sbjct: 2659 LRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDR 2717
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE 1441
L R+ NARQL LKLIANVT+GYT+A +SGRMPC E+ DSIV R TLE+AI VN+ +
Sbjct: 2718 ALSRMLNARQLGLKLIANVTFGYTSANYSGRMPCIEVGDSIVHKARETLERAIKLVNDTK 2777
Query: 1442 KWKAKVIYGDTDRYTVCI 1459
KW A+V+YGDTD V +
Sbjct: 2778 KWGARVVYGDTDSMFVLL 2795
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 41/144 (28%)
Query: 56 GQKTCLHIHRALPYLYVP---CADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQ 111
GQKTCLH+H PYLYVP C Q+ + Y+ ++ ++++AL V G+ S Q
Sbjct: 33 GQKTCLHLHGIFPYLYVPYDGCG-------QQPERYLRQMAFSIDRALNVALGNPSSTVQ 85
Query: 112 HVHECSLVRAK------------------------------KGGAVFDKSLQPHESHIPF 141
HV + SLV + GA+ +K QPHE+HIP+
Sbjct: 86 HVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKYYQPHEAHIPY 145
Query: 142 LLQFLVDYNLYGMGHLHLSKLKFR 165
LLQ +DYNLYGM ++L+ ++FR
Sbjct: 146 LLQLFIDYNLYGMNLINLAAVRFR 169
>gi|153792337|ref|NP_035394.2| DNA polymerase zeta catalytic subunit [Mus musculus]
gi|341940501|sp|Q61493.3|DPOLZ_MOUSE RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3-like; Short=REV3-like;
AltName: Full=Seizure-related protein 4
Length = 3122
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/556 (42%), Positives = 332/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL+PDP +D I
Sbjct: 2254 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQPDPEFDPI 2313
Query: 982 NVVALAFENDS-------DHAVEIYVLLYCKSESHQ--RSLV------GIPDCKVFVCSK 1026
+ +D+ + V+ K+ +HQ RS GI +V +
Sbjct: 2314 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTHQDIRSQTPLLIRSGITGLEVTYAAD 2373
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2374 EKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2425
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE D++G S +++ GRI LN+WR+MR EV
Sbjct: 2426 DDKIENR----------FAAE---------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 2466
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2467 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2526
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2527 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPQC 2586
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2587 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2646
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR+MVKQ++K + L
Sbjct: 2647 VPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK-QDRAL 2705
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ NARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2706 SRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2765
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2766 GARVVYGDTDSMFVLL 2781
Score = 136 bits (343), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 108/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+PG D C S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLPGLDTCQSPLTQLPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKCYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|148672985|gb|EDL04932.1| REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S.
cerevisiae) [Mus musculus]
Length = 3090
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/556 (42%), Positives = 332/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL+PDP +D I
Sbjct: 2222 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQPDPEFDPI 2281
Query: 982 NVVALAFENDS-------DHAVEIYVLLYCKSESHQ--RSLV------GIPDCKVFVCSK 1026
+ +D+ + V+ K+ +HQ RS GI +V +
Sbjct: 2282 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTHQDIRSQTPLLIRSGITGLEVTYAAD 2341
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2342 EKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2393
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE D++G S +++ GRI LN+WR+MR EV
Sbjct: 2394 DDKIENR----------FAAE---------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 2434
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2435 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2494
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2495 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPQC 2554
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2555 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2614
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR+MVKQ++K + L
Sbjct: 2615 VPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK-QDRAL 2673
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ NARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2674 SRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2733
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2734 GARVVYGDTDSMFVLL 2749
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 86/154 (55%), Gaps = 35/154 (22%)
Query: 43 EVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKV 102
+VPV+RV+G+TPAGQKTCLH+H PYLYVP Q+ + Y+ ++ ++++AL V
Sbjct: 2 KVPVVRVFGATPAGQKTCLHLHGIFPYLYVPYDG----YGQQPESYLSQMAFSIDRALNV 57
Query: 103 K-GSAGSKRQHVHECSLVRAK------------------------------KGGAVFDKS 131
G+ S QHV + SLV + GA+ +K
Sbjct: 58 ALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKC 117
Query: 132 LQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
QPHE+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 118 YQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 151
>gi|334324484|ref|XP_003340527.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase zeta catalytic
subunit-like [Monodelphis domestica]
Length = 3156
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/558 (43%), Positives = 335/558 (60%), Gaps = 51/558 (9%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2288 KESSQIDGPSLNNTYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2347
Query: 982 NVVALAFENDSDHAV------EIYVLLYCKSES--------HQRSLV---GIPDCKVFVC 1024
AL + SD A+ E+ ++ +S +Q L+ GI +V
Sbjct: 2348 --CALFYSISSDTALPDTDKTELTGVIVIDKDSTISNQGIRNQTPLLIRSGITRLEVTYA 2405
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
+ E LF + I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P +
Sbjct: 2406 ADEKALFQEIVNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVPDDK--- 2462
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
T+N A AE DE+G S +++ GRI LN+WR+MR
Sbjct: 2463 -----------TENRFA----AE---------RDEYGSDTMSEINIVGRITLNLWRIMRN 2498
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
EV L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++
Sbjct: 2499 EVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLE 2558
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
QLD+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q A A
Sbjct: 2559 QLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSMQQRAQMRAP 2618
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSS 1321
+C+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S
Sbjct: 2619 QCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEYKFGCTS 2678
Query: 1322 FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
R +L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K +
Sbjct: 2679 LRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKTYK-QDR 2737
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE 1441
L R+ NARQL LKLIANVT+GYTAA +SGRMPC E+ DSIV R TLE+AI VN+ +
Sbjct: 2738 ALSRMLNARQLGLKLIANVTFGYTAANYSGRMPCIEVGDSIVHKARETLERAIKLVNDTK 2797
Query: 1442 KWKAKVIYGDTDRYTVCI 1459
KW A+V+YGDTD V +
Sbjct: 2798 KWGARVVYGDTDSMFVLL 2815
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 108/190 (56%), Gaps = 41/190 (21%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G DIC S V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPFTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVP---CADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK--- 122
LYVP C Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDGCG-------QQPERYLRQMAFSIDRALNVALGNPSSTVQHVFKVSLVSGMPFY 113
Query: 123 ---------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMG 155
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM
Sbjct: 114 GYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKYYQPHEAHIPYLLQLFIDYNLYGMN 173
Query: 156 HLHLSKLKFR 165
++L+ ++FR
Sbjct: 174 LINLAAVRFR 183
>gi|6978946|dbj|BAA90768.1| DNA polymerase [Mus musculus]
Length = 3122
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/556 (42%), Positives = 332/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL+PDP +D I
Sbjct: 2254 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQPDPEFDPI 2313
Query: 982 NVVALAFENDS-------DHAVEIYVLLYCKSESHQ--RSLV------GIPDCKVFVCSK 1026
+ +D+ + V+ K+ +HQ RS GI +V +
Sbjct: 2314 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTHQDIRSQTPLLIRSGITGLEVTYAAD 2373
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2374 EKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2425
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE D++G S +++ GRI LN+WR+MR EV
Sbjct: 2426 DDKIENR----------FAAE---------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 2466
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2467 GLTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2526
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2527 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPQC 2586
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2587 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2646
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR+MVKQ++K + L
Sbjct: 2647 VPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK-QDRAL 2705
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ NARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2706 SRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2765
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2766 GARVVYGDTDSMFVLL 2781
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+PG D C S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLPGLDTCQSPLTQLPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V + S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALANPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKCYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|4079831|gb|AAC98785.1| DNA polymerase zeta catalytic subunit [Mus musculus]
Length = 3122
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/556 (42%), Positives = 332/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL+PDP +D I
Sbjct: 2254 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQPDPEFDPI 2313
Query: 982 NVVALAFENDS-------DHAVEIYVLLYCKSESHQ--RSLV------GIPDCKVFVCSK 1026
+ +D+ + V+ K+ +HQ RS GI +V +
Sbjct: 2314 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTHQDIRSQTPLLIRSGITGLEVTYAAD 2373
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2374 EKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2425
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE D++G S +++ GRI LN+WR+MR EV
Sbjct: 2426 DDKIENR----------FAAE---------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 2466
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2467 GLTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2526
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2527 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPQC 2586
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2587 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2646
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR+MVKQ++K + L
Sbjct: 2647 VPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK-QDRAL 2705
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ NARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2706 SRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2765
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2766 GARVVYGDTDSMFVLL 2781
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 108/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+PG D C S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLPGLDTCQSPLTQLPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKCYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|354485585|ref|XP_003504964.1| PREDICTED: DNA polymerase zeta catalytic subunit [Cricetulus griseus]
Length = 3050
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/558 (42%), Positives = 331/558 (59%), Gaps = 51/558 (9%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL+PDP +D I
Sbjct: 2182 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQPDPEFDPI 2241
Query: 982 NVVALAFENDS-------DHAVEIYVLLYCKSESHQ----------RSLVGIPDCKVFVC 1024
+ +D+ + V+ K+ +HQ RS GI ++
Sbjct: 2242 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTHQDIRYQTPLLIRS--GITGLEITYA 2299
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
+ E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2300 ADEKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP------ 2353
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
D +I R AE D++G S +++ GRI LN+WR+MR
Sbjct: 2354 --DDKIENR----------FAAE---------RDDYGSDTMSEINIVGRITLNLWRIMRN 2392
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
EV L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++
Sbjct: 2393 EVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLE 2452
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
QLD+I +TSE+AR+FGI F VL+RGSQYRVESM+LR A NY+ ++P Q + A
Sbjct: 2453 QLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRFAKPMNYIPVTPSVQQRSQMRAP 2512
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSS 1321
+C+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + +E G +S
Sbjct: 2513 QCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYEEFKFGCTS 2572
Query: 1322 FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
R +L ++ ++ + PNGV +V P +RKGVLPR+LEEIL TR MVKQ++K +
Sbjct: 2573 LRVPPDLLYQIRHDITVSPNGVAFVKPSIRKGVLPRMLEEILKTRFMVKQSMKAYK-QDR 2631
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE 1441
L R+ NARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +
Sbjct: 2632 ALSRMLNARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTK 2691
Query: 1442 KWKAKVIYGDTDRYTVCI 1459
KW A+V+YGDTD V +
Sbjct: 2692 KWGARVVYGDTDSMFVLL 2709
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 31/105 (29%)
Query: 92 ISLALEKALKVK-GSAGSKRQHVHECSLVRAK---------------------------- 122
++ ++++AL V G+ S QHV + SLV
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICE 60
Query: 123 --KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|302848187|ref|XP_002955626.1| hypothetical protein VOLCADRAFT_66026 [Volvox carteri f. nagariensis]
gi|300259035|gb|EFJ43266.1| hypothetical protein VOLCADRAFT_66026 [Volvox carteri f. nagariensis]
Length = 732
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/434 (51%), Positives = 287/434 (66%), Gaps = 43/434 (9%)
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIG--LLNDISRTPLESKIA 1084
E+ L LC DPD+L+GWD+Q SLG+LAER A LG+ LL RTP + I
Sbjct: 2 EVSLLRAVSSCLCCLDPDMLLGWDVQRHSLGYLAERGAALGLTPPLLRSAGRTPGAASIK 61
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
+ ++ E+G +E G T SG +V GRI+LN+WR++RG
Sbjct: 62 --EKQVGEKG-----------------------EERGETGGSGFYVTGRILLNLWRVLRG 96
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
E+KL Y+ E+ VL ++P + + L WFA+GP R+RC+ +++ R +L+L +
Sbjct: 97 ELKLGSYSFESCTAAVLGLRVPRVREQELAAWFAAGPPGGRWRCLHWLLRRCRLDLAMCE 156
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
QLD+I RT+ELAR FGIDFFSVLSRGSQYRVES+L+RLAHT N++ SP QV QPAM
Sbjct: 157 QLDLIGRTAELARTFGIDFFSVLSRGSQYRVESLLVRLAHTNNFIMTSPSREQVGGQPAM 216
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRP 1324
ECLPLVMEPES Y PVVVLDFQSLYPS +IAYN+C+ TC+G+ ++ R
Sbjct: 217 ECLPLVMEPESRMYTCPVVVLDFQSLYPSQIIAYNMCYSTCVGRPQHARAGM-----HRS 271
Query: 1325 DLH--VLRDLKDELLIP---PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPS 1379
LH V R + P PNG+ YVPPKVR GVLPR+L EIL+TR+M+K A+KK
Sbjct: 272 CLHRVVHRVVHQRPPFPWRHPNGIAYVPPKVRPGVLPRMLSEILNTRVMIKGAMKK---- 327
Query: 1380 QQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE 1439
+L RI NARQ LK+IANV+YGYTAAGFSGR+P AELADSIVQ GR TLE AI+ V
Sbjct: 328 --VLLRILNARQFGLKMIANVSYGYTAAGFSGRLPFAELADSIVQSGRQTLENAIAMVES 385
Query: 1440 NEKWKAKVIYGDTD 1453
N +W+A+V+YGDTD
Sbjct: 386 NPEWRARVVYGDTD 399
>gi|351697832|gb|EHB00751.1| DNA polymerase zeta catalytic subunit [Heterocephalus glaber]
Length = 3119
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/556 (42%), Positives = 333/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2251 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2310
Query: 982 NVVALAFENDS----DHAVEIY-VLLYCKSES-------HQRSLV---GIPDCKVFVCSK 1026
+ +D+ E+ V++ K ++ +Q L+ GI +V +
Sbjct: 2311 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVSGQDIRYQTPLLIRSGITGLEVTYAAD 2370
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2371 EKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2422
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE D++G S +++ GRI LN+WR+MR EV
Sbjct: 2423 DDKIENR----------FAAE---------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 2463
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ +L ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2464 ALTNYTFENVSFHILHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2523
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2524 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPQC 2583
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + +E G +S R
Sbjct: 2584 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYEEFKFGCTSLR 2643
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2644 VPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSVKAYK-QDKAL 2702
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ NARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2703 SRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2762
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2763 GARVVYGDTDSMFVLL 2778
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 109/187 (58%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV++D+YMA P+ G DIC S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTVDYYMASPLQGLDICQSPLTQVPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|307106792|gb|EFN55037.1| hypothetical protein CHLNCDRAFT_6685, partial [Chlorella variabilis]
Length = 732
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/431 (53%), Positives = 283/431 (65%), Gaps = 44/431 (10%)
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGI-GLLNDISRTPLESKIAAGDSEISERGITDNML 1100
DPDIL+G+++Q SLG+ AERAA LG+ LL +SR P E G +DN
Sbjct: 18 DPDILLGYEVQRASLGYAAERAAALGLPSLLRALSRLPREGVGGGG---------SDNP- 67
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
DE+ +SGL+ GRIVLNVWRLM+ E+KL Y+ E+ A V
Sbjct: 68 ----------------ADEYAWQTSSGLYCSGRIVLNVWRLMKDELKLTSYSFESCAAAV 111
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L+ ++P +P L WFA GPG AR+RC+ Y RA+LNL +++QLD++ RT E+AR FG
Sbjct: 112 LQLRVPHVPQAQLHAWFAGGPGAARWRCLAYWARRARLNLALLDQLDLVGRTGEMARTFG 171
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
IDFFSVLSRGSQYRVE+M+ RLAHTQNYL + G QVA Q AME +PLVMEP S Y D
Sbjct: 172 IDFFSVLSRGSQYRVEAMMARLAHTQNYLLVHAGREQVARQAAMEAIPLVMEPRSRLYTD 231
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGK------------ILPSKENTLGVSSFRPDLHV 1328
P+VVLDFQSLYPSM+IAYNLCF TCLG+ L + E L S L
Sbjct: 232 PLVVLDFQSLYPSMIIAYNLCFSTCLGRPAHAAAGDDPPPKLGAVEYGLPAGSLAGSLA- 290
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
+ L++ PNGV +VP + R GVLPRLL EIL+TRIMVK A+K+ S ++L R N
Sbjct: 291 ----PERLVVAPNGVAFVPREARPGVLPRLLSEILNTRIMVKGAMKRSPKSAKVLLRCLN 346
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
ARQ LKLIANVTYGYTAAGFSGRMP AELAD+IVQ GR TLE AI V + +W+A+V+
Sbjct: 347 ARQFGLKLIANVTYGYTAAGFSGRMPMAELADAIVQSGRETLESAIRQVEGHPEWRAQVV 406
Query: 1449 YGDTDRYTVCI 1459
YGDTD V +
Sbjct: 407 YGDTDSMFVLL 417
>gi|145312253|ref|NP_001077435.1| DNA polymerase zeta catalytic subunit [Rattus norvegicus]
Length = 3132
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/558 (42%), Positives = 331/558 (59%), Gaps = 51/558 (9%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL+PDP +D I
Sbjct: 2264 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQPDPEFDPI 2323
Query: 982 NVVALAFENDS-------DHAVEIYVLLYCKSESHQ----------RSLVGIPDCKVFVC 1024
+ +D+ + V+ K+ +HQ RS G+ +V
Sbjct: 2324 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTHQDIRCQTPLLIRS--GVTGLEVTYA 2381
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
+ E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2382 ADEKALFQEVTNIMKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP------ 2435
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
D +I R AE D++G S +++ GRI LN+WR+MR
Sbjct: 2436 --DDKIENR----------FAAE---------RDDYGSDTMSEINIVGRITLNLWRIMRN 2474
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
EV L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++
Sbjct: 2475 EVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLE 2534
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
QLD+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A
Sbjct: 2535 QLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAP 2594
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSS 1321
+C+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG I E G +S
Sbjct: 2595 QCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHIENLGKYDEFKFGCTS 2654
Query: 1322 FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
R +L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K +
Sbjct: 2655 LRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYR-QDR 2713
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE 1441
L R+ NARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +
Sbjct: 2714 ALSRMLNARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTK 2773
Query: 1442 KWKAKVIYGDTDRYTVCI 1459
KW A+V+YGDTD V +
Sbjct: 2774 KWGARVVYGDTDSMFVLL 2791
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 110/187 (58%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+PG DIC S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLPGLDICQSPLTQHPVKKVPVVRVFGATPAGQKTCLHLHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++L++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPERYLSQMALSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|426234529|ref|XP_004011248.1| PREDICTED: DNA polymerase zeta catalytic subunit [Ovis aries]
Length = 3056
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 334/556 (60%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2188 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2247
Query: 982 NVVALAFENDS-----DHAVEIYVLLYCKSES-------HQRSLV---GIPDCKVFVCSK 1026
+ +D+ D V++ K ++ +Q L+ GI +V +
Sbjct: 2248 CALFYCISSDTPLPDTDKTELTGVIVIDKDKTVSSQDIRYQTPLLIRSGITGLQVTYAAD 2307
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P +
Sbjct: 2308 EKALFQETANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVPDDK----- 2362
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
T+N A AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2363 ---------TENRFA----AE---------RDEYGSDTMSEINIVGRITLNLWRIMRNEV 2400
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
LN YT E V+ VL ++ P FRVL+ WF + R++ V++ + R + NL+++ QL
Sbjct: 2401 ALNNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLEQL 2460
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2461 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2520
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2521 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2580
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNG+ +V P VRKGVLPR+LEEIL TR+MVK+++K + L
Sbjct: 2581 VPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYK-QDRAL 2639
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2640 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2699
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2700 GARVVYGDTDSMFVLL 2715
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 31/105 (29%)
Query: 92 ISLALEKALKVK-GSAGSKRQHVHECSLVRAK---------------------------- 122
++ ++++AL V G+ S QHV + SLV
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICE 60
Query: 123 --KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|291396775|ref|XP_002714966.1| PREDICTED: DNA polymerase zeta [Oryctolagus cuniculus]
Length = 3128
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/558 (42%), Positives = 335/558 (60%), Gaps = 51/558 (9%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2260 KETSQIDGPSLNNTYGFKVSLQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2319
Query: 982 NVVALAFENDS-----DHAVEIYVLLYCKSES-------HQRSLV---GIPDCKVFVCSK 1026
+ +D+ ++ V++ K ++ +Q L+ GI +V +
Sbjct: 2320 CALFYCISSDTPLPDTENTELTGVIVIDKDKTAFGQDIRYQTPLLIRSGITGLEVTYAAD 2379
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF ++ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2380 EKALFQEIANVIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2431
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2432 DDKIENR----------FAAE---------RDEYGSDTMSEINIVGRITLNLWRIMRNEV 2472
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ +L ++ P FR+L+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2473 ALTNYTFENVSFHILHQRFPLFTFRMLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2532
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2533 DVIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2592
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2593 IPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2652
Query: 1324 --PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
PDL L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR+MVKQ++K +
Sbjct: 2653 IPPDL--LYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK-QDR 2709
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE 1441
L R+ NARQL LKLIANVTYGYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +
Sbjct: 2710 ALSRMLNARQLGLKLIANVTYGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTK 2769
Query: 1442 KWKAKVIYGDTDRYTVCI 1459
KW A+V+YGDTD V +
Sbjct: 2770 KWGARVVYGDTDSMFVLL 2787
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 108/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G DIC S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPLTQLPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|296484157|tpg|DAA26272.1| TPA: DNA-directed DNA polymerase delta 1-like [Bos taurus]
Length = 3133
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/558 (42%), Positives = 337/558 (60%), Gaps = 51/558 (9%)
Query: 923 QDISQISGPDGRSKPTPLSQIGFQDPASAGAG---EQLTLLSIEVQAESRGDLRPDPRYD 979
++ SQI GP + T ++ Q+ A A + LTL+S+E+ A +R DL PDP +D
Sbjct: 2265 KETSQIDGPSLNN--TYGFKVSIQNLEEAKALHEIQNLTLISVELHARTRRDLEPDPEFD 2322
Query: 980 SINVVALAFENDS-----DHAVEIYVLLYCKSES-------HQRSLV---GIPDCKVFVC 1024
I + +D+ D V++ K ++ +Q L+ GI +V
Sbjct: 2323 PICALFYCISSDTPLPDTDKTELTGVIVIDKDKTVSSQDIRYQTPLLIRSGITGLQVTYA 2382
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
+ E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P +
Sbjct: 2383 ADEKTLFQEIANIIKRYDPDILIGYEIQMHSWGYLLQRAAALSVDLCQMISRVPDDK--- 2439
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
T+N A AE DE+G S +++ GRI LN+WR+MR
Sbjct: 2440 -----------TENRFA----AE---------RDEYGSDVMSEINIVGRITLNLWRIMRN 2475
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
EV LN YT E V+ VL ++ P FRVL+ WF + R++ V++ + R + NL+++
Sbjct: 2476 EVALNNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLE 2535
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
QLD+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A
Sbjct: 2536 QLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAP 2595
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSS 1321
+C+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S
Sbjct: 2596 QCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTS 2655
Query: 1322 FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
R +L ++ ++ + PNG+ +V P VRKGVLPR+LEEIL TR+MVK+++K +
Sbjct: 2656 LRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYK-QDR 2714
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE 1441
+L R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +
Sbjct: 2715 VLSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTK 2774
Query: 1442 KWKAKVIYGDTDRYTVCI 1459
KW A+V+YGDTD V +
Sbjct: 2775 KWGARVVYGDTDSLFVLL 2792
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 108/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G DIC S L V +VPV+R++G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPLTQAPVKKVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + S+V
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSVVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|149032985|gb|EDL87826.1| REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S.
cerevisiae) [Rattus norvegicus]
Length = 3054
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/558 (42%), Positives = 331/558 (59%), Gaps = 51/558 (9%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL+PDP +D I
Sbjct: 2186 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQPDPEFDPI 2245
Query: 982 NVVALAFENDS-------DHAVEIYVLLYCKSESHQ----------RSLVGIPDCKVFVC 1024
+ +D+ + V+ K+ +HQ RS G+ +V
Sbjct: 2246 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTHQDIRCQTPLLIRS--GVTGLEVTYA 2303
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
+ E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2304 ADEKALFQEVTNIMKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP------ 2357
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
D +I R AE D++G S +++ GRI LN+WR+MR
Sbjct: 2358 --DDKIENR----------FAAE---------RDDYGSDTMSEINIVGRITLNLWRIMRN 2396
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
EV L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++
Sbjct: 2397 EVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLE 2456
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
QLD+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A
Sbjct: 2457 QLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAP 2516
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSS 1321
+C+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG I E G +S
Sbjct: 2517 QCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHIENLGKYDEFKFGCTS 2576
Query: 1322 FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
R +L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K +
Sbjct: 2577 LRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYR-QDR 2635
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE 1441
L R+ NARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +
Sbjct: 2636 ALSRMLNARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTK 2695
Query: 1442 KWKAKVIYGDTDRYTVCI 1459
KW A+V+YGDTD V +
Sbjct: 2696 KWGARVVYGDTDSMFVLL 2713
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 31/105 (29%)
Query: 92 ISLALEKALKVK-GSAGSKRQHVHECSLVRAK---------------------------- 122
++L++++AL V G+ S QHV + SLV
Sbjct: 1 MALSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICE 60
Query: 123 --KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|329663970|ref|NP_001193101.1| DNA polymerase zeta catalytic subunit [Bos taurus]
Length = 3133
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/558 (42%), Positives = 337/558 (60%), Gaps = 51/558 (9%)
Query: 923 QDISQISGPDGRSKPTPLSQIGFQDPASAGAG---EQLTLLSIEVQAESRGDLRPDPRYD 979
++ SQI GP + T ++ Q+ A A + LTL+S+E+ A +R DL PDP +D
Sbjct: 2265 KETSQIDGPSLNN--TYGFKVSIQNLEEAKALHEIQNLTLISVELHARTRRDLEPDPEFD 2322
Query: 980 SINVVALAFENDS-----DHAVEIYVLLYCKSES-------HQRSLV---GIPDCKVFVC 1024
I + +D+ D V++ K ++ +Q L+ GI +V
Sbjct: 2323 PICALFYCISSDTPLPDTDKTELTGVIVIDKDKTVSSQDIRYQTPLLIRSGITGLQVTYA 2382
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
+ E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P +
Sbjct: 2383 ADEKTLFQEIANIIKRYDPDILIGYEIQMHSWGYLLQRAAALSVDLCQMISRVPDDK--- 2439
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
T+N A AE DE+G S +++ GRI LN+WR+MR
Sbjct: 2440 -----------TENRFA----AE---------RDEYGSDVMSEINIVGRITLNLWRIMRN 2475
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
EV LN YT E V+ VL ++ P FRVL+ WF + R++ V++ + R + NL+++
Sbjct: 2476 EVALNNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLE 2535
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
QLD+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A
Sbjct: 2536 QLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAP 2595
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSS 1321
+C+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S
Sbjct: 2596 QCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTS 2655
Query: 1322 FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
R +L ++ ++ + PNG+ +V P VRKGVLPR+LEEIL TR+MVK+++K +
Sbjct: 2656 LRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYK-QDR 2714
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE 1441
+L R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +
Sbjct: 2715 VLSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTK 2774
Query: 1442 KWKAKVIYGDTDRYTVCI 1459
KW A+V+YGDTD V +
Sbjct: 2775 KWGARVVYGDTDSLFVLL 2792
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 108/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G DIC S L V +VPV+R++G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPLTQAPVKKVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + S+V
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSVVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|440910569|gb|ELR60356.1| DNA polymerase zeta catalytic subunit, partial [Bos grunniens mutus]
Length = 3093
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/558 (42%), Positives = 337/558 (60%), Gaps = 51/558 (9%)
Query: 923 QDISQISGPDGRSKPTPLSQIGFQDPASAGAG---EQLTLLSIEVQAESRGDLRPDPRYD 979
++ SQI GP + T ++ Q+ A A + LTL+S+E+ A +R DL PDP +D
Sbjct: 2225 KETSQIDGPSLNN--TYGFKVSIQNLEEAKALHEIQNLTLISVELHARTRRDLEPDPEFD 2282
Query: 980 SINVVALAFENDS-----DHAVEIYVLLYCKSES-------HQRSLV---GIPDCKVFVC 1024
I + +D+ D V++ K ++ +Q L+ GI +V
Sbjct: 2283 PICALFYCISSDTPLPDTDKTELTGVIVIDKDKTVSSQDIRYQTPLLIRSGITGLQVTYA 2342
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
+ E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P +
Sbjct: 2343 ADEKTLFQEIANIIKRYDPDILIGYEIQMHSWGYLLQRAAALSVDLCQMISRVPDDK--- 2399
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
T+N A AE DE+G S +++ GRI LN+WR+MR
Sbjct: 2400 -----------TENRFA----AE---------RDEYGSDVMSEINIVGRITLNLWRIMRN 2435
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
EV LN YT E V+ VL ++ P FRVL+ WF + R++ V++ + R + NL+++
Sbjct: 2436 EVALNNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLE 2495
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
QLD+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A
Sbjct: 2496 QLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAP 2555
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSS 1321
+C+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S
Sbjct: 2556 QCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTS 2615
Query: 1322 FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
R +L ++ ++ + PNG+ +V P VRKGVLPR+LEEIL TR+MVK+++K +
Sbjct: 2616 LRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYK-QDR 2674
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE 1441
+L R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +
Sbjct: 2675 VLSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTK 2734
Query: 1442 KWKAKVIYGDTDRYTVCI 1459
KW A+V+YGDTD V +
Sbjct: 2735 KWGARVVYGDTDSMFVLL 2752
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 87/188 (46%), Gaps = 53/188 (28%)
Query: 56 GQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVH 114
GQKTCLH+H PYLYVP Q+ + Y+ ++ ++++AL V G+ S QHV
Sbjct: 1 GQKTCLHLHGIFPYLYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVF 56
Query: 115 ECSLVRAK------------------------------KGGAVFDKSLQPHESHIPFLLQ 144
+ SLV + GA+ +K QPHE+HIP+LLQ
Sbjct: 57 KVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQ 116
Query: 145 FLVDYNLYGMGHLHLSKLKFRHPVPDAFFPRKFNYSSKQASADFQVIGCGSYPMHLMGHQ 204
+DYNLYGM ++L+ +KFR A K N++S P+HL G
Sbjct: 117 LFIDYNLYGMNLINLAAVKFR----KARRKSKVNFTSD--------------PLHLTGSC 158
Query: 205 IKTLSGLN 212
L G N
Sbjct: 159 KDRLPGKN 166
>gi|403289777|ref|XP_003936019.1| PREDICTED: DNA polymerase zeta catalytic subunit [Saimiri boliviensis
boliviensis]
Length = 3052
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/556 (42%), Positives = 329/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2184 KETSQIDGPSLNNTYGFKVSIENLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2243
Query: 982 NVVALAFENDS----DHAVEIYVLLYCKSES--------HQRSLV---GIPDCKVFVCSK 1026
+ +D+ E+ ++ E +Q L+ GI +V +
Sbjct: 2244 CALFYCISSDTPLPDTEKTELTGVIVIDKEKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2303
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2304 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2355
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
E I + AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2356 -----EDKIENRFAAE--------------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2396
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2397 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2456
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2457 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2516
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2517 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2576
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + +L
Sbjct: 2577 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYKQDRALL 2636
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2637 -RMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2695
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2696 GARVVYGDTDSMFVLL 2711
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 31/105 (29%)
Query: 92 ISLALEKALKVK-GSAGSKRQHVHECSLVRAK---------------------------- 122
++ ++++AL V G+ S QHV + SLV
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICE 60
Query: 123 --KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|410041139|ref|XP_003950950.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit
[Pan troglodytes]
Length = 3130
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2262 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2321
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2322 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2381
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L I L ISR P
Sbjct: 2382 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP-------- 2433
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2434 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2474
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2475 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2534
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2535 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2594
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2595 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEXKFGCTSLR 2654
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2655 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2713
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2714 SRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2773
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2774 GARVVYGDTDSMFVLL 2789
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G D C S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|355748973|gb|EHH53456.1| hypothetical protein EGM_14100, partial [Macaca fascicularis]
Length = 3081
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2213 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2272
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2273 CALFYCISSDAPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2332
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2333 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2384
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2385 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2425
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2426 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2485
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2486 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2545
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2546 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2605
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2606 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2664
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2665 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2724
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2725 GARVVYGDTDSMFVLL 2740
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 35/141 (24%)
Query: 56 GQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVH 114
GQKTCLH+H PYLYVP Q+ + Y+ ++ ++++AL V G+ S QHV
Sbjct: 1 GQKTCLHLHGVFPYLYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVF 56
Query: 115 ECSLVRAK------------------------------KGGAVFDKSLQPHESHIPFLLQ 144
+ SLV + GA+ +K QPHE+HIP+LLQ
Sbjct: 57 KVSLVSGMPFYGYHEKERHFMKIYLYNPAVVKRICELLQSGAIMNKFYQPHEAHIPYLLQ 116
Query: 145 FLVDYNLYGMGHLHLSKLKFR 165
+DYNLYGM ++L+ +KFR
Sbjct: 117 LFIDYNLYGMNLINLAAVKFR 137
>gi|344264026|ref|XP_003404095.1| PREDICTED: DNA polymerase zeta catalytic subunit [Loxodonta africana]
Length = 3158
Score = 432 bits (1110), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2290 KETSQIDGPSLNNTYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2349
Query: 982 NVVALAFENDS-----DHAVEIYVLLYCKSES-------HQRSLV---GIPDCKVFVCSK 1026
+ +D+ D V++ K ++ +Q + GI +V +
Sbjct: 2350 CALFYCISSDTPLPDTDKTELTGVIVIDKDKTVSSQDIRYQAPFLIRSGITGLEVTYAAD 2409
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2410 EKTLFQEIADIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2461
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R D D++G S +++ GRI LN+WR+MR EV
Sbjct: 2462 DDKIENRFAAD-------------------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 2502
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2503 SLTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2562
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2563 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPQC 2622
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2623 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEFKFGCTSLR 2682
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR+MVKQ++K + L
Sbjct: 2683 VPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK-QDRAL 2741
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2742 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2801
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2802 GARVVYGDTDSMFVLL 2817
Score = 94.0 bits (232), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 35/142 (24%)
Query: 55 AGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHV 113
A QKTCLH+H PYLYVP Q+ + Y+ ++ ++++AL V G+ S QHV
Sbjct: 72 ASQKTCLHLHGIFPYLYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHV 127
Query: 114 HECSLVRAK------------------------------KGGAVFDKSLQPHESHIPFLL 143
+ SLV + GAV +K QPHE+HIP+LL
Sbjct: 128 FKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAVMNKFYQPHEAHIPYLL 187
Query: 144 QFLVDYNLYGMGHLHLSKLKFR 165
Q +DYNLYGM ++L+ +KFR
Sbjct: 188 QLFIDYNLYGMNLINLAAVKFR 209
>gi|444709084|gb|ELW50116.1| DNA polymerase zeta catalytic subunit [Tupaia chinensis]
Length = 3196
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/556 (41%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2328 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2387
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2388 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDLRYQTPLLSRSGITGLQVTYAAD 2447
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2448 EKALFQEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALNVDLCQMISRVP-------- 2499
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R ++ +DE+ S +++ GRI LN+WR+MR EV
Sbjct: 2500 DDKIENRF-------------------SVEKDEYASDTMSEINIVGRITLNLWRIMRNEV 2540
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ +L ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2541 ALTNYTFENVSFHILHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2600
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2601 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2660
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2661 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2720
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2721 VPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2779
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ NARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2780 SRMLNARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2839
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2840 GARVVYGDTDSMFVLL 2855
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 31/105 (29%)
Query: 92 ISLALEKALKVK-GSAGSKRQHVHECSLVRAK---------------------------- 122
++ ++++AL V G+ S QHV + SLV
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMMKRICE 60
Query: 123 --KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|402868560|ref|XP_003898364.1| PREDICTED: DNA polymerase zeta catalytic subunit [Papio anubis]
Length = 3066
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2260 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2319
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2320 CALFYCISSDAPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2379
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2380 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2431
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2432 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2472
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2473 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2532
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2533 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2592
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2593 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2652
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2653 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2711
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2712 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2771
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2772 GARVVYGDTDSMFVLL 2787
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 107/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G D C S L V +VPV+R++G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQTPVKKVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAVVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|3378172|gb|AAC28460.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
Length = 3052
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2184 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2243
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2244 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2303
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L I L ISR P
Sbjct: 2304 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP-------- 2355
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2356 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2396
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2397 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2456
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2457 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2516
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2517 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2576
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2577 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2635
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2636 SRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2695
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2696 GARVVYGDTDSMFVLL 2711
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 31/105 (29%)
Query: 92 ISLALEKALKVK-GSAGSKRQHVHECSLVRAK---------------------------- 122
++ ++++AL V G+ S QHV + SLV
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPTMVKRICE 60
Query: 123 --KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|2665742|gb|AAB88486.1| DNA polymerase zeta [Homo sapiens]
Length = 3052
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2184 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2243
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2244 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2303
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L I L ISR P
Sbjct: 2304 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP-------- 2355
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2356 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2396
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2397 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2456
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2457 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2516
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2517 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2576
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2577 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2635
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2636 SRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2695
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2696 GARVVYGDTDSMFVLL 2711
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 31/105 (29%)
Query: 92 ISLALEKALKVK-GSAGSKRQHVHECSLVRAK---------------------------- 122
++ ++++AL V G+ S QHV + SLV
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPTMVKRICE 60
Query: 123 --KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|397503273|ref|XP_003822253.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform 1 [Pan
paniscus]
Length = 3130
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2262 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2321
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2322 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2381
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L I L ISR P
Sbjct: 2382 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP-------- 2433
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2434 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2474
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2475 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2534
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2535 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2594
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2595 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2654
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2655 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2713
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2714 SRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2773
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2774 GARVVYGDTDSMFVLL 2789
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G D C S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|9957534|gb|AAG09402.1|AF179428_1 DNA polymerase zeta catalytic subunit variant 1 [Homo sapiens]
gi|9957536|gb|AAG09403.1|AF179429_1 DNA polymerase zeta catalytic subunit variant 2 [Homo sapiens]
gi|50345290|gb|AAT74627.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast) [Homo
sapiens]
gi|119568678|gb|EAW48293.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast), isoform
CRA_b [Homo sapiens]
Length = 3052
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2184 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2243
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2244 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2303
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L I L ISR P
Sbjct: 2304 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP-------- 2355
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2356 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2396
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2397 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2456
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2457 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2516
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2517 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2576
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2577 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2635
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2636 SRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2695
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2696 GARVVYGDTDSMFVLL 2711
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 31/105 (29%)
Query: 92 ISLALEKALKVK-GSAGSKRQHVHECSLVRAK---------------------------- 122
++ ++++AL V G+ S QHV + SLV
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPTMVKRICE 60
Query: 123 --KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|397503275|ref|XP_003822254.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform 2 [Pan
paniscus]
gi|397503277|ref|XP_003822255.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform 3 [Pan
paniscus]
Length = 3052
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2184 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2243
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2244 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2303
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L I L ISR P
Sbjct: 2304 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP-------- 2355
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2356 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2396
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2397 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2456
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2457 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2516
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2517 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2576
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2577 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2635
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2636 SRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2695
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2696 GARVVYGDTDSMFVLL 2711
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 31/105 (29%)
Query: 92 ISLALEKALKVK-GSAGSKRQHVHECSLVRAK---------------------------- 122
++ ++++AL V G+ S QHV + SLV
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICE 60
Query: 123 --KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|297291939|ref|XP_001086055.2| PREDICTED: DNA polymerase zeta catalytic subunit [Macaca mulatta]
Length = 3064
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2259 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2318
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2319 CALFYCISSDAPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2378
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2379 EKALFHEIAHIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2430
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2431 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2471
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2472 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2531
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2532 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2591
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2592 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2651
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2652 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2710
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2711 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2770
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2771 GARVVYGDTDSMFVLL 2786
Score = 150 bits (378), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 107/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G D C S L V +VPV+R++G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAVVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|355562137|gb|EHH18769.1| hypothetical protein EGK_15435, partial [Macaca mulatta]
Length = 3081
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2213 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2272
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2273 CALFYCISSDAPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2332
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2333 EKALFHEIAHIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2384
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2385 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2425
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2426 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2485
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2486 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2545
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2546 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2605
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2606 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2664
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2665 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2724
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2725 GARVVYGDTDSMFVLL 2740
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 35/141 (24%)
Query: 56 GQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVH 114
GQKTCLH+H PYLYVP Q+ + Y+ ++ ++++AL V G+ S QHV
Sbjct: 1 GQKTCLHLHGIFPYLYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVF 56
Query: 115 ECSLVRAK------------------------------KGGAVFDKSLQPHESHIPFLLQ 144
+ SLV + GA+ +K QPHE+HIP+LLQ
Sbjct: 57 KVSLVSGMPFYGYHEKERHFMKIYLYNPAVVKRICELLQSGAIMNKFYQPHEAHIPYLLQ 116
Query: 145 FLVDYNLYGMGHLHLSKLKFR 165
+DYNLYGM ++L+ +KFR
Sbjct: 117 LFIDYNLYGMNLINLAAVKFR 137
>gi|410225886|gb|JAA10162.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan troglodytes]
gi|410267062|gb|JAA21497.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan troglodytes]
gi|410306870|gb|JAA32035.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan troglodytes]
gi|410353579|gb|JAA43393.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan troglodytes]
Length = 3130
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2262 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2321
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2322 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2381
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L I L ISR P
Sbjct: 2382 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP-------- 2433
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2434 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2474
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2475 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2534
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2535 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2594
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2595 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2654
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2655 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2713
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2714 SRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2773
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2774 GARVVYGDTDSMFVLL 2789
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G D C S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|5107941|gb|AAD40184.1|AF157476_1 DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|3063675|gb|AAC24357.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|3243260|gb|AAC24009.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|119568679|gb|EAW48294.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast), isoform
CRA_c [Homo sapiens]
Length = 3130
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2262 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2321
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2322 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2381
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L I L ISR P
Sbjct: 2382 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP-------- 2433
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2434 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2474
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2475 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2534
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2535 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2594
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2595 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2654
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2655 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2713
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2714 SRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2773
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2774 GARVVYGDTDSMFVLL 2789
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G D C S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPTMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|332213029|ref|XP_003255622.1| PREDICTED: DNA polymerase zeta catalytic subunit [Nomascus
leucogenys]
Length = 3051
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2183 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2242
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2243 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2302
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2303 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2354
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2355 DDKIENR----------FAAE---------RDEYGSCTMSEINIVGRITLNLWRIMRNEV 2395
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2396 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2455
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2456 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2515
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2516 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2575
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2576 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2634
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2635 SRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2694
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2695 GARVVYGDTDSMFVLL 2710
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 31/105 (29%)
Query: 92 ISLALEKALKVK-GSAGSKRQHVHECSLVRAK---------------------------- 122
++ ++++AL V G+ S QHV + SLV
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICE 60
Query: 123 --KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|431838720|gb|ELK00650.1| DNA polymerase zeta catalytic subunit [Pteropus alecto]
Length = 3129
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/556 (42%), Positives = 334/556 (60%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2261 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2320
Query: 982 NVVALAFENDS-----DHAVEIYVLLYCKSES-------HQRSLV---GIPDCKVFVCSK 1026
+ +D+ D V++ K ++ +Q L+ GI +V +
Sbjct: 2321 CALFYCISSDTPLPDTDKTELTGVIVIDKDKTVSNQDIRYQTPLLIRSGITRLEVTYAAD 2380
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L + ISR P +
Sbjct: 2381 EKALFQEITAIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCHMISRVPDDK----- 2435
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
T+N A AE D++G S +++ GRI LN+WR+MR EV
Sbjct: 2436 ---------TENRFA----AE---------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 2473
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ + R + NL+++ QL
Sbjct: 2474 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLEQL 2533
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2534 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2593
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2594 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2653
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNG+ +V P VRKGVLPR+LEEIL TR+MVKQ++K + L
Sbjct: 2654 VPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK-QDRAL 2712
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2713 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2772
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2773 GARVVYGDTDSMFVLL 2788
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 107/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G DIC S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPLSQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q + Y+ ++ ++++AL V GS S QHV + SLV
Sbjct: 61 LYVPYDG----YGQHPESYLSQMAFSIDRALNVALGSPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|153792012|ref|NP_002903.3| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|143811385|sp|O60673.2|DPOLZ_HUMAN RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3-like; Short=REV3-like;
Short=hREV3
gi|225000508|gb|AAI72423.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast)
[synthetic construct]
Length = 3130
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/556 (42%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2262 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2321
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2322 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2381
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L I L ISR P
Sbjct: 2382 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP-------- 2433
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2434 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2474
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2475 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2534
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2535 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2594
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2595 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2654
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR MVKQ++K + L
Sbjct: 2655 VPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRAL 2713
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2714 SRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2773
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2774 GARVVYGDTDSMFVLL 2789
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G D C S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPTMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|410928855|ref|XP_003977815.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Takifugu
rubripes]
Length = 2944
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/557 (42%), Positives = 331/557 (59%), Gaps = 49/557 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
+D SQI GP + +S QD + + LTL+ +E+ A +R DL PDP +D I
Sbjct: 2074 KDNSQIEGPSISNTYGFKISMRNLQDAKALHEVQHLTLMGMELHARTRRDLEPDPEFDPI 2133
Query: 982 NVVALAFENDSDHAVEI------YVLLYCKSESHQRS-------LV--GIPDCKVFVCSK 1026
+ +D+ I +++ + H R LV G+ +V +
Sbjct: 2134 CALFYCISSDASLPDTIGTQLTGAIVINGDHQGHDRGPRRAAPLLVRSGVSGLQVTYVTN 2193
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF + I+ FDPDIL+G+++Q S G+L +RAA LG+GL +SR P G
Sbjct: 2194 EKELFQELVTIMRRFDPDILVGYEVQMRSWGYLVQRAAVLGVGLCQQLSRVP-------G 2246
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D+ +E+ A D +DE+G + +H+ GRI LN+WR+M+ EV
Sbjct: 2247 DN-----------------SENRFAAD---QDEYGADTMTEIHIVGRITLNLWRVMKTEV 2286
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
LN Y E VA VL ++ P R L+ WF R++ V+ + R + ++++ +
Sbjct: 2287 TLNNYNFENVAFHVLHQRFPLYSQRTLSDWFDHNSDLFRWKMVDCYISRVQGIMQLLQEQ 2346
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I RTSELARVFGI FF VL+RGSQYRVESM+LR+A NY+ ++P Q A Q A +C
Sbjct: 2347 DIIGRTSELARVFGIQFFHVLTRGSQYRVESMMLRVAKPLNYIPVTPSVQQRAHQRAPQC 2406
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI----LPSKENTLGVSSF 1322
LPLVMEPES FY++ VVVLDFQSLYPS++IAYN CF TCLG + P E G +S
Sbjct: 2407 LPLVMEPESRFYSNSVVVLDFQSLYPSIIIAYNYCFSTCLGHVDSLGTPD-EFKFGCTSL 2465
Query: 1323 RPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQI 1382
R +L L++++ + PNG+ +V VRKG+LP +LEEIL+TRIMVKQ++ K+ +
Sbjct: 2466 RVPHDLLYQLRNDITVSPNGIAFVKASVRKGILPSMLEEILNTRIMVKQSM-KMYKQDKT 2524
Query: 1383 LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEK 1442
L R+ +ARQL LKLIANVT+GYTAA +SGRMP E+ DSIV R TLE+AI VN+ K
Sbjct: 2525 LMRLLDARQLGLKLIANVTFGYTAANYSGRMPSVEVGDSIVHKARETLERAIKLVNDTTK 2584
Query: 1443 WKAKVIYGDTDRYTVCI 1459
W A+V+YGDTD V +
Sbjct: 2585 WGARVVYGDTDSMFVLL 2601
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 110/188 (58%), Gaps = 35/188 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+F+VR+V+ D+Y+A P+ D+CYS + V +VPV+R++G+TPAGQKTCLH+H PY
Sbjct: 1 MFAVRVVTADYYLASPVKDLDVCYSEFRESNVKKVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLV--------R 120
+YVP Q+ + YM ++ ++++AL V G+ S QH+ + +LV
Sbjct: 61 IYVPYDG----YNQQPERYMRLVAFSIDRALNVTMGNPSSSAQHIFKVALVSGMPFYGYH 116
Query: 121 AK----------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
AK + GAV +KS QPHE HIP+LLQ +DYNLYGM L+
Sbjct: 117 AKEKLFMKIYLYNPQMVKRVCDLLQSGAVMNKSYQPHEGHIPYLLQLFIDYNLYGMNLLN 176
Query: 159 LSKLKFRH 166
L+ +KFR
Sbjct: 177 LAAVKFRR 184
>gi|301615023|ref|XP_002936975.1| PREDICTED: DNA polymerase zeta catalytic subunit [Xenopus (Silurana)
tropicalis]
Length = 3130
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/559 (43%), Positives = 334/559 (59%), Gaps = 46/559 (8%)
Query: 919 ADCLQDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPR 977
A ++ SQI GP S +S QD + + LTL+S+E+ A +R DL PDP
Sbjct: 2259 AQLKRETSQIEGPSLNNSYGFKVSVQNLQDAKALHEVQHLTLMSMELHARTRRDLEPDPE 2318
Query: 978 YDSINVVALAFENDS------DHAVEIYVLLYCK---SESHQR-----SLVGIPDCKVFV 1023
+D I + +DS V ++++ + SE +R + GI +V
Sbjct: 2319 FDPICALFYCLSSDSLLSNANKKQVTGAIIVHLEEPSSEGGRRQTPFLARSGITGFEVTY 2378
Query: 1024 CSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKI 1083
+ E LF + ++ FDPDIL+G+++Q S G+L +RA+ L + L +SR P
Sbjct: 2379 AADEKQLFEMLLSLVRRFDPDILLGYEVQMHSWGYLLQRASALNVDLCQQLSRVP----- 2433
Query: 1084 AAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMR 1143
D + R T+ +DE+G S +++ GRIVLNVWR+MR
Sbjct: 2434 ---DDKNENRFSTE-------------------KDEYGADTMSEINIVGRIVLNVWRMMR 2471
Query: 1144 GEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIM 1203
EV L YT E VA VL ++ P FR L+ WF + R+R +Y + R +L+++
Sbjct: 2472 SEVALTNYTFENVAFHVLHQRFPLFTFRSLSDWFDNRKDVLRWRTADYYMCRVHGSLQVL 2531
Query: 1204 NQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPA 1263
+LD+I RTSELAR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A
Sbjct: 2532 EKLDLIGRTSELARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPLTPSIQQRSQMRA 2591
Query: 1264 MECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI--LPSKEN-TLGVS 1320
+C+PLVMEPES FY++ ++VLDFQSLYPS++IAYN C+ TCLG I L E+ G S
Sbjct: 2592 PQCIPLVMEPESRFYSNCILVLDFQSLYPSIVIAYNYCYSTCLGNIENLGKYEDFKFGCS 2651
Query: 1321 SFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ 1380
S + +L L+ ++ + PNGV +V VRKGVLPR+LEEIL TRIMVKQ++KK
Sbjct: 2652 SLQVPPDLLYQLRHDITVSPNGVAFVKACVRKGVLPRMLEEILKTRIMVKQSMKKYK-HD 2710
Query: 1381 QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN 1440
+ L R+ +ARQL LKLIANVT+GYTAA +SGRMPC E+ DSIV R TLE+AI VN+
Sbjct: 2711 KGLTRLLDARQLGLKLIANVTFGYTAANYSGRMPCVEIGDSIVHKARETLERAIKLVNDT 2770
Query: 1441 EKWKAKVIYGDTDRYTVCI 1459
+KW AKV+YGDTD V +
Sbjct: 2771 KKWGAKVVYGDTDSMFVLL 2789
Score = 124 bits (310), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 106/188 (56%), Gaps = 34/188 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+F +R+V+ D+Y+A P+PG D+ S + G V VPV+RV+G+TPAGQ+ CLH+H PY
Sbjct: 1 MFFLRLVTADYYLAAPLPGLDVTRSHFRDGPVRRVPVVRVFGATPAGQRACLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LY P +Q+ + Y+ I+ ++++AL V G+ + QHV + ++V
Sbjct: 61 LYTPYDGYG---QQDPERYLRQIAFSIDRALNVALGNPSANSQHVFKITVVSGVPFYGYH 117
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+GGAV +K Q HE+H+P+LLQ +DYNLYGM ++
Sbjct: 118 EKERQFMKIYLYNPVMVKRVSELLQGGAVMNKCYQSHEAHVPYLLQLFIDYNLYGMNLIN 177
Query: 159 LSKLKFRH 166
L+ +KFR
Sbjct: 178 LAAVKFRR 185
>gi|281347901|gb|EFB23485.1| hypothetical protein PANDA_020229 [Ailuropoda melanoleuca]
Length = 3134
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/556 (41%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2268 KETSQIDGPSLNNTYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2327
Query: 982 NVVALAFENDS-----DHAVEIYVLLYCKSES-------HQRSLV---GIPDCKVFVCSK 1026
+ +D+ D V++ K ++ +Q L+ GI +V
Sbjct: 2328 CALFYCISSDTPLPDTDKTELTGVIVIDKDKTVSSQDIRYQTPLLIRSGITGLEVTYAPD 2387
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2388 EKALFQEIADIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVNLCQMISRVP-------- 2439
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R + D++G S +++ GRI LN+WR+MR EV
Sbjct: 2440 DDKIENRFAPE-------------------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 2480
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ + R + NL+++ QL
Sbjct: 2481 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLEQL 2540
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2541 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2600
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2601 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2660
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNG+ +V P VRKGVLPR+LEEIL TR+MVKQ++K + L
Sbjct: 2661 VPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK-QDRAL 2719
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2720 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2779
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2780 GARVVYGDTDSMFVLL 2795
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 106/192 (55%), Gaps = 40/192 (20%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGST-----PAGQKTCLHIH 64
+FSVRIV+ D+YMA P+ G DIC S L V +VPV+RV+G+T P QKTCLH+H
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPLTQAPVKKVPVVRVFGATAHAAGPRCQKTCLHLH 60
Query: 65 RALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK- 122
PYLYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 GIFPYLYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMP 116
Query: 123 -----------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYG 153
+ GA+ +K QPHE+HIP+LLQ +DYNLYG
Sbjct: 117 FYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYG 176
Query: 154 MGHLHLSKLKFR 165
M ++L+ +KFR
Sbjct: 177 MNLINLAAVKFR 188
>gi|301789010|ref|XP_002929922.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Ailuropoda
melanoleuca]
Length = 3129
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/556 (41%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2263 KETSQIDGPSLNNTYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2322
Query: 982 NVVALAFENDS-----DHAVEIYVLLYCKSES-------HQRSLV---GIPDCKVFVCSK 1026
+ +D+ D V++ K ++ +Q L+ GI +V
Sbjct: 2323 CALFYCISSDTPLPDTDKTELTGVIVIDKDKTVSSQDIRYQTPLLIRSGITGLEVTYAPD 2382
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2383 EKALFQEIADIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVNLCQMISRVP-------- 2434
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R + D++G S +++ GRI LN+WR+MR EV
Sbjct: 2435 DDKIENRFAPE-------------------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 2475
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ + R + NL+++ QL
Sbjct: 2476 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLEQL 2535
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2536 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2595
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2596 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2655
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNG+ +V P VRKGVLPR+LEEIL TR+MVKQ++K + L
Sbjct: 2656 VPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK-QDRAL 2714
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2715 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2774
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2775 GARVVYGDTDSMFVLL 2790
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G DIC S L V +VPV+RV+G+TP GQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPLTQAPVKKVPVVRVFGATPCGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|363732318|ref|XP_426179.3| PREDICTED: DNA polymerase zeta catalytic subunit [Gallus gallus]
Length = 3154
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/562 (42%), Positives = 329/562 (58%), Gaps = 59/562 (10%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ S + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2286 RETSQIEGPSLNNTYGFKVSVQNLQEAKSLHEVQHLTLISMELHARTRRDLEPDPEFDPI 2345
Query: 982 NVVALAFENDSDHA--------------VEIYVLLYCKSESHQRSLV---GIPDCKVFVC 1024
AL + SD A ++ L + Q L+ GI +V
Sbjct: 2346 --CALFYCVSSDTALPNTDKKEITGAIVIDSDRTLSSQGSRDQAPLLTRSGITGLEVSYA 2403
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
+ E LF + I+ +DPDIL+G+++Q S G+L +RAA L + L ISR P ++K
Sbjct: 2404 TDERTLFQEVVNIVKRYDPDILLGYEVQMHSWGYLLQRAAALNVDLCQMISRVPDDNK-- 2461
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
+N A + DE+G S +++ GRI+LN+WR+MR
Sbjct: 2462 ------------ENRFAAEL-------------DEYGSDTMSEINIVGRIILNIWRMMRN 2496
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
EV L YT E V VL ++ P FRVL+ WF + R++ V++ V R NL+++
Sbjct: 2497 EVNLMNYTFENVGFHVLHQRFPLFTFRVLSDWFDNKADVYRWKMVDHYVSRVHGNLQLLQ 2556
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
+LD+I+RTSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q A A
Sbjct: 2557 KLDLIDRTSEMARLFGIQFLHVLTRGSQYRVESMMLRVAKPMNYIPVTPSIQQRAQMKAP 2616
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN-------TL 1317
+C+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + EN
Sbjct: 2617 QCVPLIMEPESRFYSNAVLVLDFQSLYPSIVIAYNYCFSTCLGPV----ENLGKYDAFKF 2672
Query: 1318 GVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA 1377
G +S R +L ++ ++ + P+GV +V P VRKGVLPR+LEEIL TRIMVKQ++K
Sbjct: 2673 GCTSLRVPPDLLYQIRHDITVSPSGVAFVKPSVRKGVLPRMLEEILKTRIMVKQSMKAYK 2732
Query: 1378 PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
+ I R+ ARQL LK IAN TYGYTAA FSGRMPC EL DSIV R TLE+AI V
Sbjct: 2733 HDKAIT-RMLEARQLGLKYIANFTYGYTAANFSGRMPCIELGDSIVHKARETLERAIKLV 2791
Query: 1438 NENEKWKAKVIYGDTDRYTVCI 1459
N+ +KW A V+YGDTD V +
Sbjct: 2792 NDTKKWGAHVVYGDTDSMFVLL 2813
Score = 100 bits (250), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 36/149 (24%)
Query: 48 RVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSA 106
R GS P GQKTCLH+H PYLYVP Q + Y+ ++ ++++AL V G+
Sbjct: 29 RDSGSIP-GQKTCLHLHGVFPYLYVPYDG----FGQHPEHYLRQVAFSIDRALNVALGNP 83
Query: 107 GSKRQHVHECSLVRAK------------------------------KGGAVFDKSLQPHE 136
S QHV + SLV +GGA+ +KS QPHE
Sbjct: 84 SSTIQHVFKVSLVSGMPFYGYHEKERQFMKIYLYNPAMVKRVCELLQGGAIMNKSYQPHE 143
Query: 137 SHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 144 AHIPYLLQLFIDYNLYGMNLINLAAVKFR 172
>gi|345778314|ref|XP_539084.3| PREDICTED: DNA polymerase zeta catalytic subunit isoform 1 [Canis
lupus familiaris]
Length = 3136
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/556 (41%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2268 KETSQIDGPSLNNTYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2327
Query: 982 NVVALAFENDS-----DHAVEIYVLLYCKSES-------HQRSLV---GIPDCKVFVCSK 1026
+ +D+ D V++ K ++ +Q L+ GI +V
Sbjct: 2328 CALFYCISSDTPLPDTDKTELTGVIVIDKDKTVSSQDIRYQTPLLIRSGITGLEVTYAPD 2387
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2388 EKALFQEIADIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLGQMISRVP-------- 2439
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R + D++G S +++ GRI LN+WR+MR EV
Sbjct: 2440 DDKIENRFAPE-------------------RDDYGSETMSEINIVGRITLNLWRIMRNEV 2480
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ + R + NL+++ QL
Sbjct: 2481 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLEQL 2540
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2541 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2600
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2601 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2660
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNG+ +V P VRKGVLPR+LEEIL TR+MVKQ++K + L
Sbjct: 2661 VPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK-QDRAL 2719
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2720 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2779
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2780 GARVVYGDTDSMFVLL 2795
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 106/187 (56%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G D C L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLRGLDTCLCPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKEKHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|326916059|ref|XP_003204329.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Meleagris
gallopavo]
Length = 3126
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/562 (43%), Positives = 331/562 (58%), Gaps = 59/562 (10%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ S + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2317 RETSQIEGPSLNNTYGFKVSVQNLQEAKSLHEVQHLTLISMELHARTRRDLEPDPEFDPI 2376
Query: 982 NVVALAFENDSDHAV------EIYVLLYCKSE---SHQRSL--------VGIPDCKVFVC 1024
AL + SD A+ EI + S+ S Q S GI +V
Sbjct: 2377 --CALFYCISSDTALPNTDKKEITGAIVIDSDRTLSSQGSRDQAPLLTRSGITGLEVSYA 2434
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
+ E LF + I+ +DPDIL+G+++Q S G+L +RAA L + L ISR P ++K
Sbjct: 2435 TDERTLFQEVVNIVKRYDPDILLGYEVQMHSWGYLLQRAAALNVDLCQMISRVPDDNK-- 2492
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
+N A + DE+G S +++ GRI+LN+WR+MR
Sbjct: 2493 ------------ENRFAAEL-------------DEYGSDTMSEINIVGRIILNIWRMMRN 2527
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
EV L YT E V VL ++ P FRVL+ WF + R++ V++ V R NL+++
Sbjct: 2528 EVNLMNYTFENVGFHVLHQRFPLFTFRVLSDWFDNKADVYRWKMVDHYVSRVHGNLQLLR 2587
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
+LD+I+RTSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q A A
Sbjct: 2588 KLDLIDRTSEMARLFGIQFLHVLTRGSQYRVESMMLRVAKPMNYIPVTPSIQQRAQMKAP 2647
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN-------TL 1317
+C+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + EN
Sbjct: 2648 QCVPLIMEPESRFYSNAVLVLDFQSLYPSIVIAYNYCFSTCLGPV----ENLGKYDAFKF 2703
Query: 1318 GVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA 1377
G +S R +L ++ ++ + P+GV +V P VRKGVLPR+LEEIL TRIMVKQ++K
Sbjct: 2704 GCTSLRVPPDLLYQIRHDITVSPSGVAFVKPSVRKGVLPRMLEEILKTRIMVKQSMKAYK 2763
Query: 1378 PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
+ I R+ ARQL LK IAN TYGYTAA FSGRMPC EL DSIV R TLE+AI V
Sbjct: 2764 HDKAI-SRMLEARQLGLKYIANFTYGYTAANFSGRMPCIELGDSIVHKARETLERAIKLV 2822
Query: 1438 NENEKWKAKVIYGDTDRYTVCI 1459
N+ +KW A V+YGDTD V +
Sbjct: 2823 NDTKKWGAHVVYGDTDSMFVLL 2844
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 74/142 (52%), Gaps = 35/142 (24%)
Query: 55 AGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHV 113
A QKTCLH+H PYLYVP Q + Y+ ++ ++++AL V G+ S QHV
Sbjct: 66 ACQKTCLHLHGVFPYLYVPYDG----FGQHPEHYLRQVAFSIDRALNVALGNPSSTIQHV 121
Query: 114 HECSLVRAK------------------------------KGGAVFDKSLQPHESHIPFLL 143
+ SLV +GGA+ +KS QPHE+HIP+LL
Sbjct: 122 FKVSLVSGMPFYGYHEKERQFMKIYLYNPAMVKRVCELLQGGAIMNKSYQPHEAHIPYLL 181
Query: 144 QFLVDYNLYGMGHLHLSKLKFR 165
Q +DYNLYGM ++L+ +KFR
Sbjct: 182 QLFIDYNLYGMNLINLAAVKFR 203
>gi|330926967|ref|XP_003301686.1| hypothetical protein PTT_13248 [Pyrenophora teres f. teres 0-1]
gi|311323405|gb|EFQ90238.1| hypothetical protein PTT_13248 [Pyrenophora teres f. teres 0-1]
Length = 1692
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 245/614 (39%), Positives = 349/614 (56%), Gaps = 56/614 (9%)
Query: 854 DKGASGDMDKASVEHSSLKGSDIR---PVLEEMHQEADEMISTEPTPDLNGVTAIMHNEG 910
DK MD+A SL+ +I P EE+ A ++
Sbjct: 732 DKKKQAAMDQARAHRCSLRHWEISKPPPSFEEVEDWTRRQGKQRKV-------AKSKSKN 784
Query: 911 HIAEPNACADCLQDISQISGPDGRSKPTPLSQIGF-----QDPASAGAGEQ-LTLLSIEV 964
A P + + +SQI GP R+ Q GF Q S Q ++++S+EV
Sbjct: 785 ETASPLRKFNPMSHLSQIEGPTQRN------QHGFKYSQKQKSTSVKHDVQYMSIMSLEV 838
Query: 965 QAESRGDLRPDPRYDSINVVALAFENDSDHAVEI-YVLLYCKSESHQRSLVGIPDCKVFV 1023
SRG L PDP D I + + + + + + + + C SE ++ +V V
Sbjct: 839 HVNSRGSLVPDPAEDEIQCIFWSVQGEENATTDRPHTGILCFSEEEGIAVRIAKQVRVDV 898
Query: 1024 CSKE--IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLE 1080
+E + L + + I+ FDPDIL G+++ GS G+L ERA L +ISR
Sbjct: 899 EYEEDELDLINRLVDIVRQFDPDILTGYEVHNGSWGYLIERARMKYEYNLCEEISRV--- 955
Query: 1081 SKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWR 1140
R ++ L + V D WG TH S + V GR ++N+WR
Sbjct: 956 ------------RSLSPGRLGKDV-------------DRWGFTHTSTIRVTGRHMINIWR 990
Query: 1141 LMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNL 1200
MRGE+ L YT+E V +L ++IP + LT W+ +G R + V+Y R +LNL
Sbjct: 991 AMRGELNLLQYTMENVVFHLLHKRIPHYQYSDLTTWYTNGRPRDLTKVVDYFTTRVQLNL 1050
Query: 1201 EIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVAS 1260
EI+ D++ RTSE AR+ G+DFF+V+SRGSQ++VES + R+A +N++ +SP QV
Sbjct: 1051 EILEANDVVPRTSEQARLLGVDFFAVISRGSQFKVESTMFRIAKPENFILVSPSRKQVGQ 1110
Query: 1261 QPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGV 1319
Q A+ECLPLVMEP+S FY PV+VLDFQSLYPS+MIAYN C+ TCLG+I+ + N +G
Sbjct: 1111 QNALECLPLVMEPQSAFYTSPVLVLDFQSLYPSVMIAYNYCYSTCLGRIVNWRGRNKMGF 1170
Query: 1320 SSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPS 1379
F+ + +L +KD + I PNG+MYV P++RK +L ++L EIL TR+MVK +K+
Sbjct: 1171 MDFKREPQLLELVKDHINIAPNGMMYVKPEMRKSLLAKMLGEILETRVMVKSGMKQ-DKD 1229
Query: 1380 QQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE 1439
+ L ++ N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++
Sbjct: 1230 DKTLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIALIHA 1289
Query: 1440 NEKWKAKVIYGDTD 1453
EKW A+V+YGDTD
Sbjct: 1290 TEKWGAEVVYGDTD 1303
Score = 90.1 bits (222), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 96/201 (47%), Gaps = 42/201 (20%)
Query: 9 NIFSVRIVSIDHYMAPPIPGYDICYSSLQG--GKVN--EVPVIRVYGSTPAGQKTCLHIH 64
+ F R+ ID+Y A P D G G++ +VPVIR +G+T GQK C HIH
Sbjct: 2 DTFRFRLNCIDNYQAAPT-DLDPLLRRNAGPAGRMGAPQVPVIRAFGATETGQKVCAHIH 60
Query: 65 RALPYLYVPC-ADIP--------VQLRQEDDGYMHAISLALEK------------ALKVK 103
ALPYLY+ D+ V LR D HA++ A + VK
Sbjct: 61 GALPYLYLEYNGDLEKHVVDSYIVDLRTSID---HALASAYRRNACDGKSIYVGHITLVK 117
Query: 104 G------SAGSKR-------QHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYN 150
G S G K +H GA+ ++ QP+ESH+ ++LQ++ DYN
Sbjct: 118 GVPFFGYSVGYKTFLKVYMLNPMHMTRFADLLHQGAILNRVFQPYESHLQYILQWMCDYN 177
Query: 151 LYGMGHLHLSKLKFRHPVPDA 171
LYG ++ +K++FR PVPD+
Sbjct: 178 LYGCDYIDCAKVQFRGPVPDS 198
>gi|296199021|ref|XP_002747079.1| PREDICTED: DNA polymerase zeta catalytic subunit [Callithrix jacchus]
Length = 3127
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/556 (41%), Positives = 331/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2261 KETSQIDGPSLNNTYGFKVSIENLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2320
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2321 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2380
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2381 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2432
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE D++G S +++ GRI LN+WR+MR EV
Sbjct: 2433 DDKIENR----------FAAE---------RDDYGSYTMSEINIVGRITLNLWRIMRNEV 2473
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2474 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2533
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2534 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2593
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2594 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2653
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNG+ +V P VRKGVLPR+LEEIL TR MVKQ++K + +L
Sbjct: 2654 VPPDLLYQVRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYKQDRALL 2713
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 2714 -RMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2772
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 2773 GARVVYGDTDSMFVLL 2788
Score = 133 bits (335), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G D C S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQTPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|452837061|gb|EME39004.1| hypothetical protein DOTSEDRAFT_75635 [Dothistroma septosporum NZE10]
Length = 1701
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/640 (37%), Positives = 362/640 (56%), Gaps = 91/640 (14%)
Query: 833 MLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSSLKGSDIRPVLEEMHQEADEMIS 892
++RPP PS V +WL D + D+D+ V D P ++ ++
Sbjct: 770 IMRPP---PSCREVQEWLNDGDDPEADDLDQLEV--------DGPPAASQLKRK------ 812
Query: 893 TEPTPDLNGVTAIMHNEGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGF---QDPA 949
P P+L SQI GP ++K GF Q A
Sbjct: 813 NRPAPEL--------------------------SQIEGPTQKNKH------GFKFSQKKA 840
Query: 950 SAGAGEQ---LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS-DHAVEIYVLLYCK 1005
S + ++ +S+EV +RGDL PDP D +N+V ++ D++ ++ ++L K
Sbjct: 841 STSVQHETGYMSTMSLEVHVNNRGDLAPDPERDEVNLVVWIIADEQMDNSRKLGIVLLNK 900
Query: 1006 SESHQ-----RSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLA 1060
+ + R +VG D ++ E+ L + + I+ ++DPDIL G+++ S G+L
Sbjct: 901 DDDEEIVDRIRHIVGA-DVEIVSEDNELDLLNRMVDIVRTYDPDILTGYEVHNNSWGYLI 959
Query: 1061 ERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEW 1120
ERA + E + D + KDA D W
Sbjct: 960 ERA------------------------RLVYEYNLPDEFSRMKSQSHGRFGKDA---DRW 992
Query: 1121 GRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASG 1180
G TH S + + GR +N+WR MR E+ L YT+E V +L +++P F+ LT W+ S
Sbjct: 993 GFTHTSTVRITGRHTINIWRAMRSELNLLQYTMENVVFHLLHKRVPHYSFQTLTSWYQSK 1052
Query: 1181 PGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLL 1240
R + ++Y++ R KL+ +I++ ++I RTSE AR+ G+DFFSV SRGSQ++VES++
Sbjct: 1053 KPRDLVKVLDYLITRTKLDFDILDANELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMF 1112
Query: 1241 RLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNL 1300
R+A ++++ +SP QV +Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN
Sbjct: 1113 RIAKPESFVLVSPSRKQVGAQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNY 1172
Query: 1301 CFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLL 1359
C+ TCLG+I + N +G + F+ +L +KD+L I PNG+MYV P++RK +L ++L
Sbjct: 1173 CYSTCLGRITEWRGTNKMGFADFKRAPGLLELVKDKLNIAPNGMMYVKPEMRKSLLAKML 1232
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
EIL TR+MVK + K+ + L ++ N RQLALKLIANVTYGYT+A FSGRMPC+E+A
Sbjct: 1233 GEILETRVMVKSGM-KVDKDDKTLQQLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIA 1291
Query: 1420 DSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
DSIVQ GR TLEKAI+F++ ++W A+V+YGDTD V +
Sbjct: 1292 DSIVQTGRETLEKAIAFIHSVKRWGAEVVYGDTDSLFVYL 1331
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 96/200 (48%), Gaps = 42/200 (21%)
Query: 10 IFSVRIVSIDHYM-APPIPGYDIC----YSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
+F VR+ +DHY AP I I ++ Q K+ +VPVIRV+GST GQK C H+H
Sbjct: 6 VFRVRLNCVDHYQNAPSILDAPIFGPRGFALTQRDKLPQVPVIRVFGSTETGQKVCAHVH 65
Query: 65 RALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAG-----SKRQHVHECSLV 119
ALPYLYV + +Q D Y+ + +++ AL + K V SLV
Sbjct: 66 GALPYLYVSYQE--STDKQHVDTYISQLRNSIDHALALSYRRNPYEDPRKSAFVAHISLV 123
Query: 120 RAK------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDY 149
+ + GA+ + QP+E+H+ +LLQ++ D+
Sbjct: 124 KGVPFFGYNVGFKYYLKIYLLNPMHMTRFSDLLQQGAILAQPFQPYEAHLQYLLQWMCDF 183
Query: 150 NLYGMGHLHLSKLKFRHPVP 169
NLYG ++ + K +FR PVP
Sbjct: 184 NLYGCAYIEVDKPRFREPVP 203
>gi|407918361|gb|EKG11632.1| hypothetical protein MPH_11125 [Macrophomina phaseolina MS6]
Length = 1629
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/537 (41%), Positives = 325/537 (60%), Gaps = 31/537 (5%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVV 984
ISQI GP ++K + + + ++++S+EV +RG PDP D I +
Sbjct: 844 ISQIEGPTQKNKHGFKFSQKQKSTSVKHEAQYMSIMSLEVHVNTRGTFLPDPAEDEIACI 903
Query: 985 ALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPD 1044
++D +V+I VL SE + + D V E+ L + + I+ FDPD
Sbjct: 904 FWCVQDDDAQSVQIGVLALSSSEGIAKKMARFLDVDVQYEEDELDLLNKMVDIVREFDPD 963
Query: 1045 ILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEP 1103
IL G+++ S G+L ERA L ++ SR +S
Sbjct: 964 ILTGYEVHNSSWGYLIERARLQYEYNLCDEFSRMKSQS---------------------- 1001
Query: 1104 VVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRR 1163
K+A D WG TH S + + GR ++N+WR MRGE+ L YT+E V +L +
Sbjct: 1002 ---HGRFGKEA---DRWGFTHTSTIRITGRHMINIWRAMRGELNLLQYTMENVVFHLLHK 1055
Query: 1164 KIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDF 1223
+IP + LTKW+ SG R + V Y V R ++NL+I+ ++I RTSE AR+ G+DF
Sbjct: 1056 RIPHFTHQDLTKWYQSGKPRDLAKVVGYFVSRVQINLDILEANEIIPRTSEQARLLGVDF 1115
Query: 1224 FSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVV 1283
FSV+SRGSQ++VES++ R+A +N++ SP QV Q A+ECLPLVMEP+S FY P++
Sbjct: 1116 FSVISRGSQFKVESLMFRIAKPENFVLPSPSRKQVGQQNALECLPLVMEPQSAFYNSPLL 1175
Query: 1284 VLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNG 1342
VLDFQSLYPS+MIAYN C+ T LG+I + +N +G + F+ + +L ++D + + PNG
Sbjct: 1176 VLDFQSLYPSVMIAYNYCYSTFLGRITGWRGKNKMGFTDFKREPRLLEIVQDYINVAPNG 1235
Query: 1343 VMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTY 1402
+MYV P++RK +L ++L EIL TR+MVK + K+ ++L ++ N RQLALKLIANVTY
Sbjct: 1236 MMYVKPEMRKSLLAKMLGEILETRVMVKSGM-KVDKDDKMLQQLLNNRQLALKLIANVTY 1294
Query: 1403 GYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
GYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ +KW A+V+YGDTD V +
Sbjct: 1295 GYTSASFSGRMPCSEIADSIVQTGRETLEKAIALIHSVKKWGAEVVYGDTDSLFVYL 1351
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 43/201 (21%)
Query: 9 NIFSVRIVSIDHYMAPPIPGYDICYS-----SLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
++F R+ +DHY A P +D S Q +VPV+R +G+T GQK C HI
Sbjct: 2 DVFRFRLNCVDHYQAAPTE-FDPKLQRGLGLSSQHHDGYQVPVVRAFGATETGQKVCAHI 60
Query: 64 HRALPYLYVPCADIPVQLRQED-DGYMHAISLALEKALKV---KGSAGSKRQHVHECSLV 119
H ALPYLY+ + L Q+ D Y+ + ++++ AL V + + K + V +LV
Sbjct: 61 HGALPYLYLEYNE---SLEQDAVDAYIQRLRISIDHALAVSYRRNAYDGKSRFVAHITLV 117
Query: 120 RAK------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDY 149
+ + GA+ K +QPHESH+ +LLQ++ DY
Sbjct: 118 KGVPFFGYHVGYKFFLKVYLLNPLNMSRLADLLQQGAILAKVMQPHESHLQYLLQWMCDY 177
Query: 150 NLYGMGHLHLSKLKFRHPVPD 170
NLYG ++ +K+KFR PVPD
Sbjct: 178 NLYGCAYIDCAKVKFRSPVPD 198
>gi|452986752|gb|EME86508.1| hypothetical protein MYCFIDRAFT_131051 [Pseudocercospora fijiensis
CIRAD86]
Length = 1594
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/544 (42%), Positives = 330/544 (60%), Gaps = 38/544 (6%)
Query: 924 DISQISGPDGRSK-PTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSIN 982
++SQI GP ++K SQ G ++ +S+EV +RGDL PDP D +N
Sbjct: 711 ELSQIEGPTQKNKHGAKYSQKNTSTSVQHETG-YMSTMSLEVHVNTRGDLVPDPERDEVN 769
Query: 983 VVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIP-----DCKVFVCSKEIHLFSHFIKI 1037
+V +D + + E + L I D ++ E+ L + + I
Sbjct: 770 MVVWCIADDQMDEKTVLGIAVLAQEGDEDRLDQIRRNVGNDTQLDCEDNELDLINRMVDI 829
Query: 1038 LCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGIT 1096
+ +DPDIL G+++ GS G+L ERA L ++ SR ++SK
Sbjct: 830 VRQYDPDILTGFEVHNGSWGYLIERARLQYEFNLPDEFSR--MKSK-------------- 873
Query: 1097 DNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAV 1156
+ KDA D WG T S + + GR +N+WR MR E+ L YT+E V
Sbjct: 874 ---------SHGRFGKDA---DRWGFTQTSTVSITGRHTINIWRAMRSELNLLQYTMENV 921
Query: 1157 AETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELA 1216
+L R+IP F LT+W+ S R R ++Y++ R +L+LEI++ ++I RTSE A
Sbjct: 922 VFHLLHRRIPHYSFATLTRWYQSKKPRDLTRLLDYLITRTRLDLEILDANELIPRTSEQA 981
Query: 1217 RVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESG 1276
R+ G+DFFSV SRGSQ++VES++ R+A ++++ +SP QV +Q A+ECLPLVMEP+S
Sbjct: 982 RLLGVDFFSVFSRGSQFKVESLMFRIAKPESFVLVSPSRKQVGAQNALECLPLVMEPQSA 1041
Query: 1277 FYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDE 1335
FY+ P+VVLDFQSLYPS+MIAYN C+ TCLG+I+ + N LG + F+ +L ++D
Sbjct: 1042 FYSSPLVVLDFQSLYPSVMIAYNYCYSTCLGRIVNWRGTNKLGFADFQRAPGLLELVQDR 1101
Query: 1336 LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALK 1395
L I PNG+MYV P++RK +L ++L EIL TR+MVK + K+ + L ++ N RQLALK
Sbjct: 1102 LNISPNGMMYVKPEMRKSLLAKMLGEILETRVMVKSGM-KVDKDDRTLQQLLNNRQLALK 1160
Query: 1396 LIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRY 1455
LIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+F++ E+W A+V+YGDTD
Sbjct: 1161 LIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIAFIHSVERWGAEVVYGDTDSL 1220
Query: 1456 TVCI 1459
V +
Sbjct: 1221 FVYL 1224
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 98/205 (47%), Gaps = 46/205 (22%)
Query: 7 DSNIFSVRIVSIDHYMAPP------IPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
+ IF +R+ +DHY APP I G +S Q GK+ +VPVIRV+GST GQK C
Sbjct: 3 NDTIFRLRLNCVDHYQAPPTSLDPPIWGPQTT-TSTQLGKLPDVPVIRVFGSTETGQKVC 61
Query: 61 LHIHRALPYLYVPCADIPVQLRQED-----DGYMHAISLALEKALK-------------- 101
HI A PYLYVP + + +D + H+I AL + +
Sbjct: 62 CHIRGAFPYLYVPYTE---SIANDDVARYISTFRHSIDHALALSYRRNPYDDPRKATFVA 118
Query: 102 ----VKG------SAGSKR-------QHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
VKG + G K +H + GA+ + QP+E+H+ +LLQ
Sbjct: 119 HISLVKGVPFFGYNVGHKYFLKVYLLNPLHMTRFSDLLQQGAILRQLFQPYEAHLQYLLQ 178
Query: 145 FLVDYNLYGMGHLHLSKLKFRHPVP 169
++ D+NLYG ++ K +FR P+P
Sbjct: 179 WMCDFNLYGCAYIESKKPRFRAPLP 203
>gi|355716165|gb|AES05523.1| REV3-like, catalytic subunit of DNA polymerase zeta [Mustela putorius
furo]
Length = 1155
Score = 425 bits (1092), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/556 (41%), Positives = 330/556 (59%), Gaps = 47/556 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 325 KETSQIDGPSLNNTYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 384
Query: 982 NVVALAFENDS-----DHAVEIYVLLYCKSES-------HQRSLV---GIPDCKVFVCSK 1026
+ +D+ D V++ K ++ +Q L+ GI +V
Sbjct: 385 CALFYCITSDTPLPDTDKTELTGVIVIDKDKTVSSQDIRYQTPLLIRSGITGLEVTYAPD 444
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 445 EKALFQEITDIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 496
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R + D++G S +++ GRI LN+WR+MR EV
Sbjct: 497 DDKIENRFAPER-------------------DDYGSDTMSEINIVGRITLNLWRIMRNEV 537
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ + R + NL+++ QL
Sbjct: 538 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLEQL 597
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 598 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPLTPSVQQRSQMRAPQC 657
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 658 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 717
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNG+ +V P VRKGVLPR+LEEIL TR+MVKQ++K + L
Sbjct: 718 VPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK-QDRAL 776
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 777 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 836
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 837 GARVVYGDTDSMFVLL 852
>gi|398388499|ref|XP_003847711.1| hypothetical protein MYCGRDRAFT_77946 [Zymoseptoria tritici IPO323]
gi|339467584|gb|EGP82687.1| hypothetical protein MYCGRDRAFT_77946 [Zymoseptoria tritici IPO323]
Length = 1595
Score = 425 bits (1092), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/544 (42%), Positives = 331/544 (60%), Gaps = 50/544 (9%)
Query: 924 DISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPR 977
++SQI GP R+K GF Q AS + ++ +S+EV SRG+L PDP
Sbjct: 704 ELSQIDGPTQRNKH------GFKFSQKKASTSVQHETGYMSTMSLEVHINSRGELAPDPE 757
Query: 978 YDSINVVALAFENDS-DHAVEIYVLLYCKSESHQ-----RSLVGIPDCKVFVCSKEIHLF 1031
D +++V ++ D + +L+ K + + R +VG D ++ E+ L
Sbjct: 758 RDEVSMVTWCIADEQMDQTSRLGILVLTKDDDDEIAEKIRRIVG-NDVQIDSEDNELDLI 816
Query: 1032 SHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEI 1090
+ + I+ +DPD+L G+++ GS G+L ERA L ++ SR +S G
Sbjct: 817 NKTVDIVREYDPDVLTGYEVHNGSWGYLIERARLQYEFNLPDEFSRMKSQSHGRFG---- 872
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
KDA D WG T+ S + + GR +N+WR MR E+ L
Sbjct: 873 ---------------------KDA---DRWGFTNTSTVRITGRHTINIWRAMRSELNLLQ 908
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
YT+E V +L R+IP + LT+W+ S R + + Y + R KL+LEI++ ++I
Sbjct: 909 YTMENVVFHLLHRRIPHYSYATLTRWYQSKRPRDLVKVLNYFINRTKLDLEILDANELIP 968
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +++ +SP QV +Q A+ECLPLV
Sbjct: 969 RTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPESFALVSPSRKQVGAQNALECLPLV 1028
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVL 1329
MEP+S FY+ PV+VLDFQSLYPS+MIAYN C+ TCLG+I + N +G + F+ +L
Sbjct: 1029 MEPQSAFYSSPVLVLDFQSLYPSVMIAYNYCYSTCLGRITNWRGTNKMGFADFQRTPGLL 1088
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
KD+L I PNG+MYV P +RK +L ++L EIL TR+MVK + K+ + + L ++ N
Sbjct: 1089 ELTKDKLNISPNGMMYVKPAMRKSLLAKMLGEILETRVMVKSGM-KVDKADKTLQQLLNN 1147
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIY 1449
RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+F++ E W A+V+Y
Sbjct: 1148 RQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIAFIHSVEAWGAEVVY 1207
Query: 1450 GDTD 1453
GDTD
Sbjct: 1208 GDTD 1211
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 40/201 (19%)
Query: 9 NIFSVRIVSIDHYMAPPIPGYDI------CYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
++F VR+ +D+Y + P P D +S+ Q G + +VPVIRV+G+T GQK C H
Sbjct: 4 DVFRVRLNCLDNYQSLPGP-LDAPLWGPHAFSATQRGNLPQVPVIRVFGATETGQKVCAH 62
Query: 63 IHRALPYLYVPCADIPVQ--LRQEDDGYMHAISLALEKALKVKGSAGSKR-QHVHECSLV 119
IH A PYLYVP + + L + H+I AL + + + V SLV
Sbjct: 63 IHGAFPYLYVPYTESIEKNTLESYISTFRHSIDHALAISYRRNPYENPRNATFVAHISLV 122
Query: 120 RAK------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDY 149
+ + GA+ + QP+E+H+ +LLQ++ D+
Sbjct: 123 KGVPFFGYNVGHKYYLKVYLLNPTNMTRFTDLLQQGAIMKQVFQPYEAHLQYLLQWMCDF 182
Query: 150 NLYGMGHLHLSKLKFRHPVPD 170
NLYG ++ K FR P+P+
Sbjct: 183 NLYGCAYIETEKPHFRSPLPE 203
>gi|345565978|gb|EGX48925.1| hypothetical protein AOL_s00079g146 [Arthrobotrys oligospora ATCC
24927]
Length = 1683
Score = 424 bits (1091), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/516 (42%), Positives = 327/516 (63%), Gaps = 40/516 (7%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN-DSDHA-------VEIYVLLYCKS 1006
+ ++++S+E+ +RG L PDP D + ++ +F + D++ A + +LL +S
Sbjct: 837 QHMSVMSLEIHINTRGTLLPDPVEDEVAMIFYSFRSTDAEQASQGLQEGLHTGILLLSES 896
Query: 1007 ESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH- 1065
E + I +V S E+ L ++++ DPDI+ G+++ S G+L ERA H
Sbjct: 897 EFEADKIRKIFPIEVDRESSELDLLLSLVRVVRELDPDIITGYEVHNSSWGYLIERAKHK 956
Query: 1066 LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
L +++SR ++S G K+A D+WG TH
Sbjct: 957 YDFSLPDELSRVKVQSHGRFG-------------------------KEA---DKWGFTHT 988
Query: 1126 SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
S + V GR ++N+WR+MRGE+ L YT+E V +L R++P +R LT+W++ A
Sbjct: 989 SSIRVTGRHLINIWRVMRGELNLLQYTMENVVFHLLARRMPHYSYRDLTRWYSGEKVNAW 1048
Query: 1186 YRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHT 1245
R ++Y + R K +LE+++ +++ RTSE AR+ G+DFFSV SRGSQ++VES++ R+A
Sbjct: 1049 TRVLKYFLTRVKTDLELLDAQELVLRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKP 1108
Query: 1246 QNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
+NY+ ISP QV SQ A+EC+PLVMEP+S FY PV+VLDFQSLYPS+MIA+N C+ TC
Sbjct: 1109 ENYVLISPSRKQVGSQNALECIPLVMEPQSNFYTSPVLVLDFQSLYPSVMIAFNYCYSTC 1168
Query: 1306 LGKILPSKE--NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEIL 1363
LG+I+ K N LG + ++ + +L L+ ++ I PNG+MYV P+VRK +L ++L EIL
Sbjct: 1169 LGRIVQWKGGVNKLGFTDYKRENGLLELLRSQINIAPNGMMYVKPEVRKSLLAKMLGEIL 1228
Query: 1364 STRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIV 1423
TR+MVK+ +K ++L + N RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIV
Sbjct: 1229 ETRVMVKEGMKN-DKQDKMLQSLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIV 1287
Query: 1424 QCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
Q GR TLEKAI ++ EKW A+V+YGDTD +C+
Sbjct: 1288 QTGRETLEKAIEMIHATEKWGAEVVYGDTDSLFICL 1323
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 41/197 (20%)
Query: 11 FSVRIVSIDHYMAPPIP-GYDICYS--SLQGGKVN-EVPVIRVYGSTPAGQKTCLHIHRA 66
F +R+ ++D Y A P Y + S + G KV +P++RV+G+T GQK C HIH A
Sbjct: 3 FRLRLNNVDSYQAVPTSLDYPVILSKPTPPGQKVKATLPILRVFGATETGQKVCAHIHGA 62
Query: 67 LPYLYVPCADIPVQLRQEDDG-YMHAISLALEKAL-KV--KGSAGSKRQHVHECSLVRAK 122
PYLYV + L Q+D G Y++ + +L+ AL K+ + K V +L +
Sbjct: 63 FPYLYV---EYEGSLAQDDVGAYIYRLHASLDHALCKIYRRNPHDPKNVFVARITLCKGV 119
Query: 123 ------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLY 152
+ GA+ K QP+E+H+ ++ Q+++DYNLY
Sbjct: 120 PFFGFHVGWTYYLKIYLLNPSLTTRVSDLLRSGAILKKQFQPYEAHLQYIPQWMIDYNLY 179
Query: 153 GMGHLHLSKLKFRHPVP 169
G G+++ SK+ FR P+P
Sbjct: 180 GCGYINCSKVYFRQPIP 196
>gi|443899578|dbj|GAC76909.1| DNA polymerase zeta, catalytic subunit [Pseudozyma antarctica T-34]
Length = 1665
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/514 (42%), Positives = 321/514 (62%), Gaps = 38/514 (7%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI-------YVLLYCKSE 1007
+ +T L++EV +R L PDP +D+I V +F+N+ ++ + L+ +
Sbjct: 794 QHMTTLAVEVLNTTRAGLFPDPAFDAIQAVIYSFQNEDENLQDTGSRPDLRTGLIVVANG 853
Query: 1008 SHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HL 1066
+ +G+ V V E+ LF+ I ++ +FDP+IL+GW+I S G++ ERA+
Sbjct: 854 GFRAERLGLSHLAVEVVEDELDLFNALIDLMRAFDPEILVGWEIHSSSWGYIIERASKEF 913
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
L+ R+ + + AG G +DN + T +S
Sbjct: 914 EFDLVPQFGRSIVHNTGRAG-------GKSDN---------------------YAYTQSS 945
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
L + GR LN+WRLM+GE+ LN+YT+E V +L R++P + LT+W+ SG
Sbjct: 946 ALRITGRHTLNLWRLMKGELTLNLYTLENVCYHLLHRRVPKFSHQTLTEWYTSGRAELVR 1005
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R + Y V +L LEI+ + + + RT+E AR++GIDFFSV+SRGSQ++VES++LR+A +
Sbjct: 1006 RALLYYVEMVELELEIIAESEFVLRTAEFARIYGIDFFSVISRGSQFKVESIMLRIAKPE 1065
Query: 1247 NYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
N++ ISP QV Q A ECLPL+MEP+S FY P++VLDFQSLYPS+MIAYNLC+ TCL
Sbjct: 1066 NFVLISPSRAQVGKQNAAECLPLIMEPQSAFYKGPLIVLDFQSLYPSIMIAYNLCYSTCL 1125
Query: 1307 GKILPSKENT-LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
G++ K + LGV+ + P +L L+D++ I NG+++V P+VRK +L ++L EIL T
Sbjct: 1126 GRVAGFKGTSKLGVTDYAPPKGLLSLLQDDVNISSNGLLFVKPRVRKSLLAKMLSEILDT 1185
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R+MVK ++K + + RI NARQL+LKL+ANVTYGYT+A FSGRMPC E+AD+IVQ
Sbjct: 1186 RVMVKASMKG-TKADKSFQRIQNARQLSLKLLANVTYGYTSASFSGRMPCVEIADAIVQT 1244
Query: 1426 GRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
GR TLEKA+ +N E+W A+V+YGDTD V +
Sbjct: 1245 GRETLEKAMDLINGTEEWGAQVVYGDTDSLFVYL 1278
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 37/197 (18%)
Query: 10 IFSVRIVSIDHYMAPPIP-GYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALP 68
F VR+++IDH + P P C + +G + +VPV+R++G+TPAGQ+ C+H+H P
Sbjct: 31 FFRVRLINIDHVLTLPGPLDRTQCAFNAEGQLLRKVPVLRIFGATPAGQRVCIHVHNVFP 90
Query: 69 YLYVPC---------------------ADIPVQLRQ-----EDDGYMHAISLALEKALKV 102
Y Y+ A + LR+ E + ++ AI L K +
Sbjct: 91 YCYIQYKGSLDPDDVLRYIHRLGRELNAAMAASLRRNAADPEANQFIAAIHLC--KGINF 148
Query: 103 KG-----SAGSKRQHV---HECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGM 154
G S K V H + + G V QP E HI + LQF++DYN++G
Sbjct: 149 YGYHVGYSYFLKISFVDPSHSYRIATILESGGVMKTIFQPFEIHIRYQLQFMLDYNIFGC 208
Query: 155 GHLHLSKLKFRHPVPDA 171
+L L ++FR PVP+
Sbjct: 209 DYLDLDDVRFRLPVPEG 225
>gi|281427127|ref|NP_001163919.1| REV3-like, polymerase (DNA directed), zeta, catalytic subunit
[Xenopus laevis]
gi|262176857|gb|ACY27483.1| DNA polymerase zeta [Xenopus laevis]
Length = 3139
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/560 (41%), Positives = 328/560 (58%), Gaps = 48/560 (8%)
Query: 919 ADCLQDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPR 977
A ++ SQI GP S +S QD + + LTL+ +E+ A +R DL PDP
Sbjct: 2268 AQVKRETSQIEGPSLNNSYGFKVSVQNLQDAKALHEVQHLTLMCMELHARTRRDLEPDPE 2327
Query: 978 YDSINVVALAFENDS----------DHAVEIYVLLYCKSESHQR-----SLVGIPDCKVF 1022
+D I + +DS A+ I+ L S+ +R + GI +V
Sbjct: 2328 FDPICALFYCISSDSLLSNTNKRQVTGAIVIH-LEEANSDGGRRQTPFLARSGITGFEVT 2386
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESK 1082
+ E LF + ++ FDPDIL+G+++Q S G+L +RA+ L + L +SR P +
Sbjct: 2387 YATDEKQLFVMLLSLVRRFDPDILLGYEVQMHSWGYLLQRASALNVDLCQQLSRVPDDKN 2446
Query: 1083 IAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLM 1142
SE +DE+G S +++ GRIVLNVWR+M
Sbjct: 2447 ENRFSSE---------------------------KDEYGADTMSEINIVGRIVLNVWRMM 2479
Query: 1143 RGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEI 1202
R E L YT E VA +L ++ P FR L+ WF + R++ +Y + R L++
Sbjct: 2480 RSEAALTNYTFENVAFHILHQRFPLFTFRSLSDWFDNRKDVLRWKMADYYMSRVHGTLQL 2539
Query: 1203 MNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQP 1262
+ +LD+I RTSELAR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q +
Sbjct: 2540 LEKLDLIGRTSELARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPLTPSIQQRSQMR 2599
Query: 1263 AMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI--LPSKEN-TLGV 1319
A +C+PLVMEPES FY++ ++VLDFQSLYPS++IAYN C+ TCLG + L E+ G
Sbjct: 2600 APQCIPLVMEPESRFYSNCILVLDFQSLYPSIVIAYNYCYSTCLGNVENLGKYEDFKFGC 2659
Query: 1320 SSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPS 1379
SS + +L L++++ + PNGV +V VRKGVLPR+LEEIL TRIMVKQ++K
Sbjct: 2660 SSLQVPPDLLYQLRNDITVSPNGVAFVKACVRKGVLPRMLEEILKTRIMVKQSMKNYKQD 2719
Query: 1380 QQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE 1439
+ L R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSI+ R TLE+AI VN+
Sbjct: 2720 KS-LTRLLDARQLGLKLIANVTFGYTAANFSGRMPCVEIGDSIIHKARETLERAIKLVND 2778
Query: 1440 NEKWKAKVIYGDTDRYTVCI 1459
+KW AKV+YGDTD V +
Sbjct: 2779 TKKWGAKVVYGDTDSMFVLL 2798
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 107/188 (56%), Gaps = 34/188 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FS+R+V+ D+Y+A P+PG D+ S + V VPV+RV+G+TPAGQ+ CLH+H PY
Sbjct: 1 MFSLRLVTADYYLAAPLPGLDVTRSHFRDSPVRRVPVVRVFGATPAGQRACLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LY P +Q+ + Y+ I+ ++++AL V G+ + QHV + ++V
Sbjct: 61 LYTPYDGYG---QQDPERYLRQIAFSIDRALNVALGNPAASSQHVFKITVVSGVPFYGYH 117
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+GGAV +K QPHE+H+P+LLQ +DYNLYGM ++
Sbjct: 118 EKEIQFMKIYLYNPAMVKRVSELLQGGAVMNKCYQPHEAHVPYLLQLFIDYNLYGMNLIN 177
Query: 159 LSKLKFRH 166
L+ +KFR
Sbjct: 178 LAAVKFRR 185
>gi|189202408|ref|XP_001937540.1| DNA polymerase zeta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984639|gb|EDU50127.1| DNA polymerase zeta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1633
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 248/636 (38%), Positives = 359/636 (56%), Gaps = 61/636 (9%)
Query: 836 PPFSPP----SVDSVHKWLLHDDKGASGDMDKASVEHSSLKGSDIR---PVLEEMHQEAD 888
PPF P S H ++ D K + MDKA + SL+ +I P EE+ +
Sbjct: 652 PPFDPTGKSLSSTGEHPPVMVDKKEQAA-MDKARAQRCSLRHWEISKPPPSFEEVEDWTN 710
Query: 889 EMISTEPTPDLNGVTAIMHNEGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGF--- 945
A ++ A P + + +SQI GP T +Q GF
Sbjct: 711 RQAKQRKL-------AKSKSKNETASPLRKFNPMSHLSQIEGP------TQKNQYGFKYC 757
Query: 946 --QDPASAGAGEQ-LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI-YVL 1001
Q S Q ++++S+EV SRG L PD D I + + + + + + +
Sbjct: 758 QKQKSTSVKHDVQYMSIMSLEVHVNSRGSLVPDAAEDEIQCIFWSVQGEENATTDRPHAG 817
Query: 1002 LYCKSESHQRSLVGIPDCKVFVCSKE--IHLFSHFIKILCSFDPDILMGWDIQGGSLGFL 1059
+ C S+ ++ +V V +E + L + + I+ FDPDIL G+++ GS G+L
Sbjct: 818 ILCFSDEDGIAVRIAKQVRVDVEYEEDELDLINRLVDIVRQFDPDILTGYEVHNGSWGYL 877
Query: 1060 AERA-AHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED 1118
ERA L +ISR ++ G + KDA D
Sbjct: 878 IERARMKYEYNLCEEISRV---RSLSPGK----------------------VGKDA---D 909
Query: 1119 EWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA 1178
WG TH S + V GR ++N+WR MRGE+ L YT+E V +L ++IP LT W+
Sbjct: 910 RWGFTHTSTIRVTGRHMINIWRAMRGELNLLQYTMENVVFHLLHKRIPHYQHSDLTTWYT 969
Query: 1179 SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
+G R + + Y R +LNL+I+ D++ RTSE AR+ G+DFF+V+SRGSQ++VES
Sbjct: 970 NGRPRDLTKVINYFTTRVQLNLDILEANDIVPRTSEQARLLGVDFFAVISRGSQFKVEST 1029
Query: 1239 LLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAY 1298
+ R+A +N++ +SP QV Q A+ECLPLVMEP+S FY PV+VLDFQSLYPS+MIAY
Sbjct: 1030 MFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSAFYTSPVLVLDFQSLYPSVMIAY 1089
Query: 1299 NLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPR 1357
N C+ TCLG+I+ + N +G F+ + +L +KD + I PNG+MYV P++RK +L +
Sbjct: 1090 NYCYSTCLGRIVNWRGRNKMGFMDFKREPQLLELVKDHINIAPNGMMYVKPEMRKSLLAK 1149
Query: 1358 LLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
+L EIL TR+MVK +K+ + + L ++ N RQLALKL+ANVTYGYT+A FSGRMPC+E
Sbjct: 1150 MLGEILETRVMVKSGMKQ-DKNDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSE 1208
Query: 1418 LADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
+ADSIVQ GR TLEKAI+ ++ +KW A+V+YGDTD
Sbjct: 1209 IADSIVQTGRETLEKAIALIHATQKWGAEVVYGDTD 1244
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 125 GAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDA 171
GA+ ++ QP+ESH+ +LQ++ DYNLYG +++ +K++FR PVPD+
Sbjct: 92 GAILNRVFQPYESHLQNILQWMCDYNLYGCDYINCAKVRFRGPVPDS 138
>gi|449302023|gb|EMC98032.1| hypothetical protein BAUCODRAFT_120942 [Baudoinia compniacensis UAMH
10762]
Length = 1737
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/546 (41%), Positives = 331/546 (60%), Gaps = 58/546 (10%)
Query: 924 DISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPR 977
++SQI GP +SK GF Q S + ++ +++EV SRGDL PDP
Sbjct: 870 ELSQIDGPTQKSKH------GFKYSQKKKSTSVQHETGYMSTMALEVHINSRGDLAPDPE 923
Query: 978 YDSINVVA--LAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFI 1035
D ++ V LA E D +V++ + + K ++ E+ + + +
Sbjct: 924 RDEVSFVVWCLADEQMEDESVKMGIAVLDK-------------VQIDAEDSELDVINRMV 970
Query: 1036 KILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERG 1094
+I+ ++DPDIL G+++ S G+L ERA L ++ SR +S
Sbjct: 971 EIVRTYDPDILTGFEVHNSSWGYLIERARLQYEYNLPDEFSRMRSQS------------- 1017
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
KDA D WG TH S + + GR +NVWR MR E+ L YT+E
Sbjct: 1018 ------------HGRFGKDA---DRWGFTHTSTVRITGRHTINVWRAMRSELNLLQYTME 1062
Query: 1155 AVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSE 1214
V +L R+IP PF LT+W+ S + + ++Y++ R L+LEI++ ++I RTSE
Sbjct: 1063 NVVFHLLHRRIPHYPFSTLTRWYTSSKPKDLSKVLDYLITRTVLDLEILDANELIPRTSE 1122
Query: 1215 LARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPE 1274
AR+ G+DFFSV SRGSQ++VES++ R+A ++++ +SP QV +Q A+ECLPLVMEP+
Sbjct: 1123 QARLLGVDFFSVFSRGSQFKVESLMFRIAKPESFVLVSPSRKQVGAQNALECLPLVMEPQ 1182
Query: 1275 SGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLK 1333
S FY P++VLDFQSLYPS+MIAYNLC+ TCLG+I + N LG + F+ + +L +K
Sbjct: 1183 SAFYNSPLLVLDFQSLYPSVMIAYNLCYSTCLGRITDWRGTNKLGFADFKREPGLLELVK 1242
Query: 1334 DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLA 1393
D++ I PNG+MYV P++RK +L ++L EIL TR+MVK + K+ + L ++ N RQLA
Sbjct: 1243 DKINISPNGMMYVKPEMRKSLLAKMLGEILETRVMVKSGM-KVDKGDKTLQQLLNNRQLA 1301
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
LKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ +W A+V+YGDTD
Sbjct: 1302 LKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIALIHHTARWGAEVVYGDTD 1361
Query: 1454 RYTVCI 1459
V +
Sbjct: 1362 SLFVSL 1367
Score = 97.4 bits (241), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 41/204 (20%)
Query: 8 SNIFSVRIVSIDHYMAPPIPGYDICY-----SSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
S++F VR+ +DHY PP + + SS Q G + VP+IRV+G+T GQK C H
Sbjct: 37 SDVFRVRLNCVDHYQHPPTSLDPLLWGPKALSSTQRGNLPHVPIIRVFGATETGQKVCAH 96
Query: 63 IHRALPYLYVPCADIP--VQLRQEDDGYMHAISLALEKALKVKGSAGSKRQ--HVHECSL 118
IH ALPYL + A P Q+ + H+I AL + + + R V SL
Sbjct: 97 IHGALPYLLISYAGSPDADQVEKYIATVRHSIDHALALSYRRNPYDNNARNSTFVAHISL 156
Query: 119 VRAKK------------------------------GGAVFDKSLQPHESHIPFLLQFLVD 148
V+ GA+ + +QP+E+H+ FLLQ++ D
Sbjct: 157 VKGVPFFGYNVGYRYYLKIYLLNPLHMTRFADLLLQGAILHQVIQPYEAHLQFLLQWMCD 216
Query: 149 YNLYGMGHLHLS--KLKFRHPVPD 170
+NLYG ++ + K+++R PVP+
Sbjct: 217 FNLYGCAYIEVKAEKVRWRAPVPE 240
>gi|389751639|gb|EIM92712.1| hypothetical protein STEHIDRAFT_144019 [Stereum hirsutum FP-91666
SS1]
Length = 1703
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/526 (42%), Positives = 307/526 (58%), Gaps = 40/526 (7%)
Query: 937 PTPLSQIGFQ-DPASAGAGEQL------TLLSIEVQAESRGDLRPDPRYDSINVVALAFE 989
PT L G + P A A + + T+ S+EV A SRG L PDP D + +V AF+
Sbjct: 837 PTQLHPFGLKTSPPDAQAQDSMRERQSITVFSLEVFAPSRGGLLPDPDEDQVALVFYAFQ 896
Query: 990 NDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGW 1049
+ +D Y + + D ++ V E+ L + + I+ DPD+++GW
Sbjct: 897 DSNDTTSSQYRTGIVATRHAHTDPRRMRDFQLDVVDDELDLLNSLVDIVLELDPDVIVGW 956
Query: 1050 DIQGGSLGFLAERAAHLGIGLLNDISRTP-LESKIAAGDSEISERGITDNMLAEPVVAES 1108
+IQ S G+L R H G + +SR P L+S A G
Sbjct: 957 EIQNASWGYLKARGNHYGFDIEEHLSRAPPLQSMHAQG---------------------- 994
Query: 1109 LLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSI 1168
++WG S LH+ GR LNVWR+MR E+ L MYT E VLR+++P
Sbjct: 995 --------SEQWGMRTTSTLHIVGRHALNVWRIMRVELSLGMYTFENTVFHVLRQRVPMY 1046
Query: 1169 PFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLS 1228
LT+W+ S V Y R + L+I+++ + I +T+E ARVFG+DF VL+
Sbjct: 1047 KAGTLTEWYNSEHPSHMATLVRYFSSRTLMVLQILDEAETITKTAEFARVFGVDFMDVLN 1106
Query: 1229 RGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQ 1288
RGSQ++VE+ +LR+A ++++ +SP V Q A EC+PL+MEP+S FY+ PVVVLDFQ
Sbjct: 1107 RGSQFKVEAFMLRIAKPESFVLLSPSKADVGKQNAAECMPLIMEPQSAFYSSPVVVLDFQ 1166
Query: 1289 SLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVP 1347
SLYPS+MIAYN C+ TCLG++ K +N GV+ +L L+D + + PNG+MYV
Sbjct: 1167 SLYPSIMIAYNYCYSTCLGRVTDFKGQNKFGVTELERPAGLLDTLQDYINVAPNGMMYVK 1226
Query: 1348 PKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAA 1407
P+VRKG+L R+L E+L TR+MVKQA+K + + L R +ARQL LK IANVTYGYT+A
Sbjct: 1227 PQVRKGLLGRMLTELLETRVMVKQAMKGVK-DNKTLRRTLDARQLGLKFIANVTYGYTSA 1285
Query: 1408 GFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
FSGRMP E+ADSIVQ GR TLEKAIS + KW AKV+YGDTD
Sbjct: 1286 SFSGRMPAVEVADSIVQSGRETLEKAISLIESTRKWDAKVVYGDTD 1331
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 39/184 (21%)
Query: 13 VRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
V+I +IDH M P S L + + PVIR++G++ GQK CLH+H+ PY V
Sbjct: 11 VQITNIDHTMVNP--------SELDNTLLPKAPVIRIFGTSSTGQKACLHVHQVYPYFMV 62
Query: 73 --PCADIPVQLRQEDDGYMHAISLALEKALK----------------VKG---------- 104
P P + + + +++LAL + K VKG
Sbjct: 63 EYPGKTDPDSVNRYIGTLIRSLNLALAVSYKRNPDSPNCRFVRAIVLVKGVHFYGFHSSY 122
Query: 105 SAGSKRQHVHECSLVRA---KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSK 161
S K V R+ + G+V D + E H+ F+LQFL D+NLYG G + L K
Sbjct: 123 SLFLKIHIVDPAYFTRSIAIMQSGSVMDTRFRVFEGHLSFILQFLCDFNLYGCGWIELGK 182
Query: 162 LKFR 165
+ R
Sbjct: 183 VWQR 186
>gi|388853211|emb|CCF53077.1| probable catalytic subunit of DNA polymerase zeta UPR-1 [Ustilago
hordei]
Length = 1689
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/514 (41%), Positives = 322/514 (62%), Gaps = 38/514 (7%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI-------YVLLYCKSE 1007
+ +T+L++EV +RG+L PDP +D + + +F+N+ ++ + L+ +E
Sbjct: 802 QHMTILAVEVLTTTRGNLFPDPAFDPVQAIIYSFQNEDENLQDTGSRPDLRTGLILVANE 861
Query: 1008 SHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HL 1066
+ +G+ V V E+ LF+ I ++ +FDP+I++GW+I S G++ ERA+
Sbjct: 862 NMNADRLGLSHLAVEVVEDELELFNTLIDLIRAFDPEIIVGWEIHSSSWGYIIERASKEY 921
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
L+ + R+ + + AG G +DN + T +S
Sbjct: 922 DFDLVPQLGRSVVHNTGRAG-------GKSDN---------------------YAYTQSS 953
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
L + GR LN+WRLM+GE+ LN+YT+E V +L R++P + LT+WF SG
Sbjct: 954 ALRITGRHTLNLWRLMKGELTLNLYTLENVCYHLLHRRMPKFSHQTLTQWFVSGRVELMR 1013
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
+ + Y V +L LEI+ + + + RT+E AR++GIDFFSV+SRGSQ++VES++LR+A +
Sbjct: 1014 KALLYFVDTVELELEIIAESEFVLRTAEFARIYGIDFFSVISRGSQFKVESIMLRIAKPE 1073
Query: 1247 NYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
N++ ISP QV Q A ECLPL+MEP+S FY P++VLDFQSLYPS+MIAYNLC+ TCL
Sbjct: 1074 NFVLISPSRAQVGKQNAAECLPLIMEPQSAFYKGPLIVLDFQSLYPSIMIAYNLCYSTCL 1133
Query: 1307 GKILPSKENT-LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
G++ K + GV + P +L L+D++ I NG+++V P VRK +L ++L EIL T
Sbjct: 1134 GRVAGFKGTSKFGVVDYAPPKGLLSLLQDDVNISSNGLLFVKPHVRKSLLAKMLSEILDT 1193
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R+MVK ++K + + RI NARQL+LKL+ANVTYGYT+A FSGRMPC E+AD+IVQ
Sbjct: 1194 RVMVKGSMKGTK-ADKSFQRIQNARQLSLKLLANVTYGYTSASFSGRMPCVEIADAIVQT 1252
Query: 1426 GRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
GR TLE+A+ +N E+W A+V+YGDTD V +
Sbjct: 1253 GRETLERAMDLINGTEEWGAQVVYGDTDSLFVYL 1286
Score = 93.2 bits (230), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 37/197 (18%)
Query: 10 IFSVRIVSIDHYMAPPIP-GYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALP 68
F VR+++IDH + P P C + +G + +VP++R++G+TPAGQ+ CLHIH P
Sbjct: 29 FFRVRLINIDHILTVPGPLDRTQCAFNAEGQTLRKVPILRIFGATPAGQRVCLHIHNVYP 88
Query: 69 YLYVPC---------------------ADIPVQLRQ-----EDDGYMHAISLALEKALKV 102
Y YV A + V LR+ E + ++ AI L K +
Sbjct: 89 YCYVQYKGSLDPGDALRYIHRLGRELNAAMAVSLRRNPDDPEANQFIAAIHLC--KGVNF 146
Query: 103 KG-----SAGSKRQHV---HECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGM 154
G S K V H + + G V QP E HI + LQF++DYN++G
Sbjct: 147 YGYHVGYSYFLKISFVDPSHNYRIATILESGGVMKTIFQPFEIHIRYQLQFMLDYNIFGC 206
Query: 155 GHLHLSKLKFRHPVPDA 171
++ L + FR P+P+
Sbjct: 207 DYVDLDDVSFRLPIPEG 223
>gi|330793739|ref|XP_003284940.1| hypothetical protein DICPUDRAFT_148772 [Dictyostelium purpureum]
gi|325085156|gb|EGC38569.1| hypothetical protein DICPUDRAFT_148772 [Dictyostelium purpureum]
Length = 2213
Score = 421 bits (1083), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/556 (41%), Positives = 328/556 (58%), Gaps = 49/556 (8%)
Query: 920 DCLQDISQISGPDGRSKPTPLSQIGFQDPAS--AGAGEQLTLLSIEVQAESRGDLRPDPR 977
D + SQIS + P+P + + S + + LTLLS+E+ + SRG L+P+P
Sbjct: 1306 DYYSEFSQIS----QHTPSPTNYVKDFSIKSLQSNLNQNLTLLSLEIHSNSRGKLKPNPE 1361
Query: 978 YDSINVV--------ALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIH 1029
DS+ + ++ E + ++ +++ + + L DC + EI
Sbjct: 1362 IDSVQAIFYCIRDEDSIELEGEQYQDIKGIIMVSSTTNDNNYGL----DCSINRVKDEIE 1417
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR--TPLESKIAAGD 1087
L FI+++ S+D DI++G++IQ SLG+L ER+ HLG L +++SR +P++
Sbjct: 1418 LLKSFIQLIRSYDIDIIVGFEIQMNSLGYLIERSHHLGFSLCDEVSRVISPIKG------ 1471
Query: 1088 SEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVK 1147
SE S+R + +KD D +G H SG+ + GRIVLN+WR++R E+
Sbjct: 1472 SEYSKRS-------------NFFSKD---RDPYGFEHQSGIKIVGRIVLNLWRILRHEIT 1515
Query: 1148 LNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLD 1207
++ YT E + VL ++ LT+W++ R R+R + Y + + N ++ D
Sbjct: 1516 IDNYTYENLCYKVLNKRQEEYSNEKLTQWYSDN--RQRWRVLNYNLRHVENNFNLLYSFD 1573
Query: 1208 MINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECL 1267
I +TSELARV+GIDF+SV+SRGSQYRVESMLLRL N++ +SP +V SQP E +
Sbjct: 1574 FIRKTSELARVYGIDFYSVVSRGSQYRVESMLLRLTKPDNFILLSPTREEVMSQPMPESI 1633
Query: 1268 PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE---NTLGVSSFRP 1324
PLVM+P S Y PVVVLDFQSLYPS+MIAYN CF TCLG++ P E G S
Sbjct: 1634 PLVMDPLSRLYNSPVVVLDFQSLYPSIMIAYNYCFSTCLGRVDPLDEINRKKFGASYLEM 1693
Query: 1325 DLHVLRDLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L + D + I PN VMY VR G+ PRLL+E+L TRIMVK+A+KK + ++
Sbjct: 1694 KPGLLESISLDNITISPNNVMYTKKSVRHGIFPRLLQEVLDTRIMVKRAMKKSSNDKKT- 1752
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
+ I NARQL LK++ANV +GYTAA FSGRMPC E+ DSIVQ R TLE AI V +++W
Sbjct: 1753 YSILNARQLGLKMLANVAFGYTAATFSGRMPCVEIGDSIVQTARETLEAAIKIVESSKEW 1812
Query: 1444 KAKVIYGDTDRYTVCI 1459
KV+YGDTD V +
Sbjct: 1813 NGKVVYGDTDSLFVLL 1828
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%)
Query: 2 ADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCL 61
++ + +S F VRIV ID+Y + P+ DI S L G ++ EVP++R++GSTPAGQK CL
Sbjct: 6 SNERKNSVYFGVRIVDIDYYQSRPVKELDITISPLDGNEIYEVPILRIFGSTPAGQKCCL 65
Query: 62 HIHRALPYLYV 72
H+H+ PY ++
Sbjct: 66 HLHQLFPYFFI 76
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 123 KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
K G++ ++ + ESHIPF+LQ +DYNL GM ++ SK FR P+P
Sbjct: 190 KSGSIMNREFRVFESHIPFVLQVFLDYNLSGMSYIEFSKACFRTPLP 236
>gi|367041926|ref|XP_003651343.1| hypothetical protein THITE_2111493 [Thielavia terrestris NRRL 8126]
gi|346998605|gb|AEO65007.1| hypothetical protein THITE_2111493 [Thielavia terrestris NRRL 8126]
Length = 1752
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/564 (40%), Positives = 328/564 (58%), Gaps = 53/564 (9%)
Query: 907 HNEGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGF---QDPASAGA---GEQLTLL 960
H + P + SQI+GP TP + GF Q S + ++ +
Sbjct: 827 HKTSSVRLPPGTQGPKTEFSQIAGP------TPKNTHGFKYSQKQKSTSVQHEAQYMSTM 880
Query: 961 SIEVQAESRGDLRPDPRYDSINVVALAFEND---------SDHAVEIYVLLYCKSESHQR 1011
S+E+ +RG L P+P D + + +D +D + ++L + S R
Sbjct: 881 SLEIHVNTRGKLVPNPEEDEVQCIFWCLRSDEMCLYGSQSTDDTISGVIVL-SEDGSRAR 939
Query: 1012 SLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGL 1070
+ +V + E+ L + + I+ + DPDIL G+++ G S G+L ERA H L
Sbjct: 940 QIRSQTSVEVVEETSELDLMTKMVDIVRAHDPDILTGYEVHGSSWGYLIERAMHKYDYDL 999
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
N+ SR + + + D WG S LHV
Sbjct: 1000 CNEFSR----------------------------MKSASFGRSGREADRWGFQKTSMLHV 1031
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR V+NVWR MRGE+ L Y++E V +L R+IP +R LT W+ SG + +
Sbjct: 1032 TGRHVINVWRAMRGELNLLQYSMENVVWHLLHRRIPHYSWRTLTDWYLSGRPGDLSKVLR 1091
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + R +L++EI+ ++I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L
Sbjct: 1092 YYLRRTRLDIEILEANELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1151
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
ISP QV +Q A+ECLPLVMEP+S FY PV+VLDFQSLYPS+MIAYN C+ TCLG+I+
Sbjct: 1152 ISPSRKQVGAQNALECLPLVMEPQSAFYTSPVLVLDFQSLYPSVMIAYNYCYSTCLGRIV 1211
Query: 1311 PSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
+ N LG + ++ +LR LKD + I PNG+MY P++RK +L ++L EIL TR+MV
Sbjct: 1212 SWRGTNKLGFTEYKRREGLLRLLKDYINIAPNGIMYTKPEIRKSLLAKMLTEILETRVMV 1271
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K+ + L ++ + RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR T
Sbjct: 1272 KSGMKE-DKDDKTLQKLLHNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRET 1330
Query: 1430 LEKAISFVNENEKWKAKVIYGDTD 1453
LE+AI++++ E+W A+V+YGDTD
Sbjct: 1331 LERAIAYIHSVERWNAEVVYGDTD 1354
Score = 103 bits (258), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 40/203 (19%)
Query: 9 NIFSVRIVSIDHYMAPPIPGYDICYSS----LQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
++F VR+ IDHY A P YD + K +VPVIRV+GST GQK C HIH
Sbjct: 2 DVFRVRLNCIDHYQAAPT-RYDPPLRRDAHLTEAAKQPKVPVIRVFGSTETGQKVCAHIH 60
Query: 65 RALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA 121
A PYLY+ P+ + Y++ + L+++ AL V + ++ V +LV+
Sbjct: 61 GAFPYLYIEYGG-PLD-KATVSEYIYRLHLSIDHALAVSYRRDQYRDRQSFVARITLVKG 118
Query: 122 K------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ G + + QP+E+H+ +LLQF+ DYNL
Sbjct: 119 VPFYGFYVGYRFYLKIYMLNPVVMTRLADLLQQGLIMGRKFQPYEAHLQYLLQFMTDYNL 178
Query: 152 YGMGHLHLSKLKFRHPVPDAFFP 174
YG +L K++FR PVPD P
Sbjct: 179 YGCDYLDAGKVRFRAPVPDPAGP 201
>gi|392571499|gb|EIW64671.1| hypothetical protein TRAVEDRAFT_42080 [Trametes versicolor FP-101664
SS1]
Length = 1667
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/548 (42%), Positives = 314/548 (57%), Gaps = 43/548 (7%)
Query: 913 AEPNACADCLQDISQISGPDGRSKPTPL-SQIGFQDPASAGAGEQLTLLSIEVQAESRGD 971
+ PN A +D SQI GP R P L S + ++ + + +T+L++E+ A S+GD
Sbjct: 773 SRPNVRATRTKDSSQIEGPTQR--PYGLKSTLAPRNDKAKRERQNMTVLAVEIFAPSKGD 830
Query: 972 LRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKS-----ESHQRSLVGIPDCKVFVCSK 1026
PDP D + + A SDH E C ES Q + + + K
Sbjct: 831 HVPDPDQDEMAAIFYALHT-SDH-TEGGGAFMCDYGMIAVESEQLNARRLRNIKAEFVES 888
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E+ L + I I+ DPDI+ GW++Q GS G+L R G+ + ISR P ++ G
Sbjct: 889 ELDLLNRLIDIVLELDPDIVSGWEVQAGSWGYLTARGRSYGLDVGEQISRAP--ARHMGG 946
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
S D WG S V GR VLNVWR+MR E
Sbjct: 947 GS-----------------------------DRWGMQTTSTFKVTGRHVLNVWRIMRSEH 977
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
++YT E V +LRR+ P + +T WF S +R + Y R + LEI++
Sbjct: 978 TFSIYTFENVVFQILRRRTPWYSPQTVTSWFNSPVPEHAHRVLRYFAQRTIMVLEILDVA 1037
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
+++ + +E ARVFG+DFFSVLSRGSQ++VES + R+A +N++ ISP V Q A EC
Sbjct: 1038 EVVTKNAEFARVFGVDFFSVLSRGSQFKVESFMFRIAKPENFVLISPSKQDVGKQNAAEC 1097
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPD 1325
+PL+MEP S FY P+VVLDFQSLYPS+MIAYN C+ TCLG++ K + GV+ R
Sbjct: 1098 IPLIMEPLSAFYNSPLVVLDFQSLYPSIMIAYNYCYSTCLGRVTDFKGQFKFGVTDLRQP 1157
Query: 1326 LHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR 1385
+L L D + + PNG+MYV VR+G+L R+L E+L TR+MVKQA+K A + LHR
Sbjct: 1158 AGMLATLHDYINVAPNGMMYVKQTVRRGLLGRMLTELLDTRVMVKQAMKG-AKDDKALHR 1216
Query: 1386 IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKA 1445
I +ARQL LK IANVTYGYT+A +SGRMP E+ADSIVQ GR TLEKAI +N +KW A
Sbjct: 1217 ILDARQLGLKFIANVTYGYTSASYSGRMPAVEIADSIVQSGRETLEKAIRVINSTKKWGA 1276
Query: 1446 KVIYGDTD 1453
KV+YGDTD
Sbjct: 1277 KVVYGDTD 1284
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 39/186 (20%)
Query: 13 VRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
VRI ID+ +APP P L ++ VPVIR+YG + G KTC+HIH+ PY +V
Sbjct: 12 VRINHIDYTVAPPGP--------LDHSSLHRVPVIRIYGDSSLGLKTCVHIHQVYPYFFV 63
Query: 73 PCAD------IPVQLRQEDDGYMHAISLALEK------------ALKVKG---------S 105
+ + + + HAI+++L++ + VKG
Sbjct: 64 EYLEKMHPDIVNRYIAKLQHSLNHAIAISLKRNPLSAKSKFVRAIVLVKGVHFYGFHANY 123
Query: 106 AGSKRQHVHECSLV-RA---KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSK 161
A + H+ + + V RA + G + + +ESHI +LLQFL D+ LYG G + L
Sbjct: 124 APFLKVHIADPAFVNRAVTIMQSGTIMKTRFRVYESHIQYLLQFLCDFGLYGCGWIDLGD 183
Query: 162 LKFRHP 167
+ R P
Sbjct: 184 VWQRSP 189
>gi|71006944|ref|XP_758078.1| hypothetical protein UM01931.1 [Ustilago maydis 521]
gi|46097152|gb|EAK82385.1| hypothetical protein UM01931.1 [Ustilago maydis 521]
Length = 1678
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/514 (42%), Positives = 316/514 (61%), Gaps = 38/514 (7%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI-------YVLLYCKSE 1007
+ +T L++EV +R L PDP D+I + +F+N+ ++ + L+ +
Sbjct: 796 QHMTTLAVEVMTTTRDSLFPDPALDAIQSIVYSFQNEDENLQDTGSRPDLRTGLIIVSGD 855
Query: 1008 SHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HL 1066
+G+ V V E+ LF+ I ++ +FDP+IL+GW+I S G++ ERA+
Sbjct: 856 EINFDRLGLSHLAVEVVEDELELFNTLIDLVRAFDPEILVGWEIHSSSWGYIVERASKEY 915
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
L+ I R + + AG G +DN + T +S
Sbjct: 916 DYDLVPQIGRAIIHNTGRAG-------GKSDN---------------------YAYTQSS 947
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
L GR LN+WRLM+GE+ LN+YT+E V +L R+IP + LT+W+ SG
Sbjct: 948 ALRFTGRHTLNLWRLMKGELTLNLYTLENVCYHLLHRRIPKYSHQTLTQWYKSGRAELIR 1007
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R + Y V +L LEI+ + + + RT+E AR++GIDFFSV+SRGSQ++VES++LR+A +
Sbjct: 1008 RALLYYVDMVELELEIIAESEFVLRTAEFARIYGIDFFSVISRGSQFKVESIMLRIAKPE 1067
Query: 1247 NYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
N++ ISP QV Q A ECLPL+MEP+S FY P++VLDFQSLYPS+MIAYNLC+ TCL
Sbjct: 1068 NFVLISPSRAQVGKQNAAECLPLIMEPQSAFYKGPLIVLDFQSLYPSIMIAYNLCYSTCL 1127
Query: 1307 GKILPSKENT-LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
G++ K + GV+ + P +L L+D++ I NG+++V P VRK +L ++L EIL T
Sbjct: 1128 GRVAGFKGTSKFGVTEYAPPKGLLSLLQDDVNISSNGLLFVKPSVRKSLLAKMLSEILDT 1187
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R+MVK ++K S + RI NARQ++LKL+ANVTYGYT+A FSGRMPC E+AD+IVQ
Sbjct: 1188 RVMVKSSMKA-TKSDKSFQRIQNARQISLKLLANVTYGYTSASFSGRMPCVEIADAIVQT 1246
Query: 1426 GRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
GR TLEKA+ +N E+W A+V+YGDTD V +
Sbjct: 1247 GRETLEKAMDLINGTEEWGAQVVYGDTDSLFVYL 1280
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 35/196 (17%)
Query: 10 IFSVRIVSIDHYMAPPIPGYD--ICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
F VR+++IDH + P P +D C + +G + +VPV+R++G+TPAGQ+ CL+IH
Sbjct: 34 FFRVRLINIDHILTVPTP-FDRTSCAFNAEGQPLRKVPVLRLFGATPAGQRVCLYIHNVY 92
Query: 68 PYLYVPC---------------------ADIPVQLRQ---EDDGYMHAISLALEKALKVK 103
PY Y+ A + LR+ + D ++ L K +
Sbjct: 93 PYCYIQYKGSLDPDNVLRYIHRLGRGLNAAMAASLRRNLHDTDANQFIAAIHLCKGVNFY 152
Query: 104 GSAGSKRQHV--------HECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMG 155
G ++ H + + G V QP E HI + LQF++DYN++G
Sbjct: 153 GYHVGYSYYLKISFVDPAHNYRIAAILESGGVMKTVFQPFEIHIRYQLQFMLDYNIFGCD 212
Query: 156 HLHLSKLKFRHPVPDA 171
++ L ++FR P+P+
Sbjct: 213 YVDLDDIRFRLPIPEG 228
>gi|453079938|gb|EMF07990.1| hypothetical protein SEPMUDRAFT_167090 [Mycosphaerella populorum
SO2202]
Length = 1725
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/549 (42%), Positives = 332/549 (60%), Gaps = 49/549 (8%)
Query: 924 DISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPR 977
++SQI GP R+K GF Q AS + ++ +S+EV SR DL PDP
Sbjct: 818 ELSQIEGPTQRNKH------GFKYSQRKASTSVQHETGYMSTMSLEVHVNSRADLAPDPE 871
Query: 978 YDSINVVALAFEN---DSDHAVEIYVLLYCKSE--SHQRSLVGIPDCKVFVCSKEIHLFS 1032
D +N+V + D + I VL+ E + R +VG ++ E+ L +
Sbjct: 872 RDEVNMVVWCITDEQMDDSPKLGILVLIEEDEELPAKIRKMVG-DHVQIDSEDNELDLIN 930
Query: 1033 HFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEIS 1091
+ I+ +D DIL G+++ S G+L ERA H L ++ SR SK G
Sbjct: 931 RMVDIVREYDIDILTGYEVHNNSWGYLIERARLHYEFNLPDEFSRMKSHSKGRFG----- 985
Query: 1092 ERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMY 1151
+DA D WG TH S + + GR +N+WR MR E+ L Y
Sbjct: 986 --------------------RDA---DRWGFTHTSTVSITGRHTINIWRAMRSELNLLQY 1022
Query: 1152 TVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINR 1211
T+E V +L R+IP + LT+W+ S R + ++Y+V R KL+LEI++ ++I R
Sbjct: 1023 TMENVVFHLLHRRIPHYTYATLTRWYKSDRPRDLAKVLDYLVTRTKLDLEILDANELIPR 1082
Query: 1212 TSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVM 1271
TSE AR+ G+DFFSV SRGSQ++VES++ R+A ++++ +SP QV SQ A+ECLPLVM
Sbjct: 1083 TSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPESFVLVSPSRKQVGSQNALECLPLVM 1142
Query: 1272 EPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLR 1330
EP+S FY+ P++VLDFQSLYPS+MIAYN C+ TCLG++ + N +G + F+ +L
Sbjct: 1143 EPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTCLGRVTKWRGTNKMGFADFKRHPGLLE 1202
Query: 1331 DLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNAR 1390
KD+L + PNG+MYV P++RK +L ++L EIL TR+MVK + K+ + L ++ N R
Sbjct: 1203 LTKDKLNVAPNGMMYVKPELRKSLLAKMLGEILETRVMVKSGM-KVDRDDKTLQQLLNNR 1261
Query: 1391 QLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYG 1450
QLALKLIANVTYGYT+A +SGRMPC+E+ADSIVQ GR TLEKAI+ ++ E+W A+V+YG
Sbjct: 1262 QLALKLIANVTYGYTSASYSGRMPCSEIADSIVQTGRETLEKAIALIHSVERWGAEVVYG 1321
Query: 1451 DTDRYTVCI 1459
DTD V +
Sbjct: 1322 DTDSLFVYL 1330
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 46/203 (22%)
Query: 9 NIFSVRIVSID------HYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
++F +R+ ID + + PPI G S+ Q ++ +VPVIRV+GST GQK C+H
Sbjct: 25 DVFRIRLNCIDFAQYAPNTLDPPIWG-PRSLSATQRVQLPDVPVIRVWGSTETGQKACVH 83
Query: 63 IHRALPYLYVPCAD---------IPVQLRQEDDGYMHAISLALEKALK------------ 101
+H A PYLYVP D LR D HA+ L+ +
Sbjct: 84 VHGAFPYLYVPYVDSIEESQVAHYISNLRSSID---HALCLSYRRNPYDNPRNATFVAHI 140
Query: 102 --VKG------SAGSKR-------QHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFL 146
VKG + G K +H GA+ + QP+E+H+ + LQ++
Sbjct: 141 SLVKGVPFFGYNVGYKYYLKIYLLNPLHMTRFADLLHQGAILRQHFQPYEAHLQYQLQWM 200
Query: 147 VDYNLYGMGHLHLSKLKFRHPVP 169
D+NLYG ++ +SK FR P+P
Sbjct: 201 CDFNLYGCAYIEVSKPHFRAPIP 223
>gi|238505487|ref|XP_002383968.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus flavus
NRRL3357]
gi|220690082|gb|EED46432.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus flavus
NRRL3357]
Length = 1430
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/567 (39%), Positives = 333/567 (58%), Gaps = 54/567 (9%)
Query: 909 EGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSI 962
E H+ EPN + L SQI GP T ++ GF Q S Q ++++S+
Sbjct: 542 ERHLHEPNTKLNVL---SQIEGP------TQKNEYGFKYSQKGRSTSVEHQTQYMSIMSL 592
Query: 963 EVQAESRGDLRPDPRYDSINVVALAFENDSD--------HAVEIYVLLYCKSESHQRSLV 1014
EV +RG L P+P D I+ ++ ++D + V + ++ + + + +L
Sbjct: 593 EVHVNTRGVLAPNPEEDEISCISWCIQSDDEDLDVNSHLSGVRVGMVFQGEYDKPEETLS 652
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLND 1073
+ E+ L + + ++ +DPDI+ G+++ GS G++ ERA + ++
Sbjct: 653 KALRIDLEHEPTELDLINRLVDLVRLYDPDIITGYEVHNGSWGYVIERARKKYDFDICDE 712
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+SR + A KDA D WG H S + V GR
Sbjct: 713 LSRVKSQ-------------------------AHGRFGKDA---DRWGFNHTSSIRVSGR 744
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
++N+WR MR E+ L Y++E V +L R+IP FR LT+W+ SG R + V+Y V
Sbjct: 745 HMINIWRAMRSELNLLQYSMENVVFHLLHRRIPHYSFRDLTEWYQSGKPRDLMKVVDYFV 804
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
R ++NLEI+ +++ R SE AR+ GIDF+SV SRGSQ++VES++ R+A +N+L +SP
Sbjct: 805 SRVQMNLEILESNELVPRISEQARLLGIDFYSVFSRGSQFKVESLMFRIAKPENFLLVSP 864
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG++ +
Sbjct: 865 SKKQVGQQNALECLPLVMEPQSDFYTSPLIVLDFQSLYPSIMIAYNYCYSTFLGRVHQWR 924
Query: 1314 -ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ +G + ++ +L KD++ I PNG+MY P+VR+ +L R+L EIL TR+MVK
Sbjct: 925 GRDKMGFTEYQRQPRLLELFKDKINIAPNGMMYAKPEVRRSLLARMLAEILETRVMVKTG 984
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+ K+ + L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEK
Sbjct: 985 M-KMDKDDKALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEK 1043
Query: 1433 AISFVNENEKWKAKVIYGDTDRYTVCI 1459
AI+ ++ E+W A+V+YGDTD V +
Sbjct: 1044 AIALIHSVERWGAEVVYGDTDSLFVYL 1070
>gi|225558751|gb|EEH07035.1| polymerase zeta subunit [Ajellomyces capsulatus G186AR]
Length = 1628
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/547 (41%), Positives = 325/547 (59%), Gaps = 55/547 (10%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP +++ GF+ A + ++++S+EV +RG L P+P
Sbjct: 747 LSQIEGPTQKNRH------GFKYSQKKPARNVRQEAQYMSVMSLEVHVNTRGTLVPNPEE 800
Query: 979 DSINVVALAFE------NDSDHAVEIY--VLLYCKSESHQRSLVGIPDCKVFVCSKEIHL 1030
D I+ V + ND D + I ++ ++ES + + E+ L
Sbjct: 801 DEISCVFWCVQDGETEINDDDDSAGITAGIIALSENESLASRISPTMISEFEEEHTELDL 860
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLES--KIAAGD 1087
+ + ++ DPDIL G+++ S G+L ERA + L +++SR S +I G+
Sbjct: 861 LTRLVDVVRQRDPDILTGYEVHNSSWGYLIERARYKYDYDLCDELSRVKTNSHGRIGKGN 920
Query: 1088 SEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVK 1147
D WG H S + + GR ++N+WR MRGE+
Sbjct: 921 ------------------------------DRWGFNHTSSIRITGRHMINIWRAMRGELN 950
Query: 1148 LNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLD 1207
L YT+E V +L ++IP PF+ LTKWF S R + + Y + R +L+L+I+ +
Sbjct: 951 LLQYTMENVVFHLLHQRIPHYPFQDLTKWFTSKRPRDIAKVINYFLSRVQLDLKIIESNE 1010
Query: 1208 MINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECL 1267
+I+RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N++ ISPG QV Q A+ECL
Sbjct: 1011 LISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENFILISPGKKQVGQQNALECL 1070
Query: 1268 PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDL 1326
PLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ TCLG+++ + +N LG FR
Sbjct: 1071 PLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRVVSWRGQNKLGFIDFRRPA 1130
Query: 1327 HVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRI 1386
+L LKD++ I PNG++Y +VRK +L ++L EIL TR+MVK +K A + L R+
Sbjct: 1131 GLLELLKDQINIAPNGIIYAKQEVRKSLLAKMLIEILETRVMVKGGMKA-AKDDKYLQRL 1189
Query: 1387 FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAK 1446
N RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ R TLEKAI ++ E+W A+
Sbjct: 1190 LNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETLEKAIVLIHSVERWGAE 1249
Query: 1447 VIYGDTD 1453
V+YGDTD
Sbjct: 1250 VVYGDTD 1256
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 123 KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
+ GAV + LQP+ESH+ +L Q++ DYNLYG +L SK+ FR P+P
Sbjct: 81 RQGAVMKRVLQPYESHLQYLSQWMCDYNLYGCAYLKSSKVTFRAPIP 127
>gi|260823502|ref|XP_002604222.1| hypothetical protein BRAFLDRAFT_262795 [Branchiostoma floridae]
gi|229289547|gb|EEN60233.1| hypothetical protein BRAFLDRAFT_262795 [Branchiostoma floridae]
Length = 813
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/502 (45%), Positives = 313/502 (62%), Gaps = 48/502 (9%)
Query: 962 IEVQAESRGDLRPDPRYDSINVVALAFENDSDHA----VEIYVLLYCKSESHQRSLV--- 1014
+E+ +R +LRPDP YD I ++ +D A VE+ + R L+
Sbjct: 1 MELHIRTRRELRPDPEYDPICMLFYCLHDDGQRARGQGVEV--------TGNCRPLLPRS 52
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G+ V ++E L HF++++ +DPDIL+G+++Q S G+L +RAA L + L +
Sbjct: 53 GVTSLDVTYVAEEKELVEHFLQLIRKWDPDILVGYEVQMLSWGYLLQRAATLEMDLCPML 112
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
SR P +K ES + D +DEWG S + + GRI
Sbjct: 113 SRIPDAAK------------------------ESRFSAD---QDEWGADQMSEISIVGRI 145
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
V+NVWRLMR E+ LN YT E VA + +++P FR L+ WF + +R V++ V
Sbjct: 146 VINVWRLMRNELALNNYTFENVAFHAMHQRVPLYSFRTLSDWFDNKTDL--WRTVDHFVT 203
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
R + NL+++ Q+D+I RTSELAR+FGI F+ VL+RGSQYRVESM+LR+A NY+A+SP
Sbjct: 204 RCRGNLQLLEQMDLIGRTSELARLFGIQFYHVLTRGSQYRVESMMLRIAKPMNYIAVSPS 263
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI---LP 1311
Q A Q A ECLPL++EPES FY PV+VLDFQSLYPS++IAYN C+ TCLG++
Sbjct: 264 MQQRARQRAPECLPLILEPESRFYTHPVLVLDFQSLYPSIVIAYNYCYTTCLGRVEHLSE 323
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
E G SS + LR L+D L + PNGV ++ VRKGVLP +L++IL+TRIMVK+
Sbjct: 324 PGEFEFGCSSLKVPPGTLRKLQDRLTVSPNGVAFITKDVRKGVLPGMLQDILNTRIMVKK 383
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
++K + L R+ ++RQL LKLIANVTYGYT+A FSGRM C E+ADSIV+ R TLE
Sbjct: 384 SMKDYKQDKN-LTRMLHSRQLGLKLIANVTYGYTSANFSGRMACIEIADSIVRKARETLE 442
Query: 1432 KAISFVNENEKWKAKVIYGDTD 1453
+AI VN+ KW A+V+YGDTD
Sbjct: 443 RAIRLVNDTPKWGARVVYGDTD 464
>gi|367021872|ref|XP_003660221.1| hypothetical protein MYCTH_2298247 [Myceliophthora thermophila ATCC
42464]
gi|347007488|gb|AEO54976.1| hypothetical protein MYCTH_2298247 [Myceliophthora thermophila ATCC
42464]
Length = 1749
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/553 (41%), Positives = 331/553 (59%), Gaps = 53/553 (9%)
Query: 924 DISQISGPDGRSKPTPLSQIGFQ------DPASAGAGEQLTLLSIEVQAESRGDLRPDPR 977
D SQI GP TP + GF+ + + ++ +S+E+ SRG L P+P
Sbjct: 845 DPSQIVGP------TPRNIYGFKYSQRQKSTSVQHEAQYMSTMSLEIHVNSRGKLVPNPE 898
Query: 978 YDSINVVALAFEND---------SDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEI 1028
+D + + +D +D+ + V+L + + + +V + E+
Sbjct: 899 HDEVQCIFWCLRSDEQCLLGSQSADNTICGIVVL-SEDGDLAKQIRSQTSVEVVEETSEL 957
Query: 1029 HLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGD 1087
L ++I+ + DPDIL G+++ G S G+L ERA L N+ SRT ES +G
Sbjct: 958 DLMVRMVEIVRAHDPDILTGYEVHGSSWGYLIERAMLKYDYDLCNEFSRTKSESFGRSG- 1016
Query: 1088 SEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVK 1147
KDA D WG S LHV GR ++N+WR MRGE+
Sbjct: 1017 ------------------------KDA---DRWGFRTTSMLHVTGRHIINIWRAMRGELD 1049
Query: 1148 LNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLD 1207
L Y++E V +L R+IP +R LT W+ SG R + + Y + R ++++EI+ +
Sbjct: 1050 LLQYSMENVVWHLLHRRIPHFSWRALTDWWLSGRPRDIGKVLRYYLRRTRMDIEILEANE 1109
Query: 1208 MINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECL 1267
+I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L +SP QV +Q A+ECL
Sbjct: 1110 LIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPSRKQVGAQNALECL 1169
Query: 1268 PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDL 1326
PLVMEP S FY P++VLDFQSLYPS+MIAYN C+ TCLG+I+ + N LG + +R
Sbjct: 1170 PLVMEPHSAFYPSPLLVLDFQSLYPSVMIAYNYCYSTCLGRIVSWRGTNKLGFTDYRRRE 1229
Query: 1327 HVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRI 1386
+L+ LKD + I PNG+MY P++RK +L ++L EIL TR+MVK +K+ + L ++
Sbjct: 1230 GLLKLLKDHINIAPNGMMYTKPEIRKSLLAKMLTEILETRMMVKSGMKE-DKDDRTLQKL 1288
Query: 1387 FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAK 1446
N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI++++ E+W A+
Sbjct: 1289 LNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAYIHSVERWGAE 1348
Query: 1447 VIYGDTDRYTVCI 1459
V+YGDTD V +
Sbjct: 1349 VVYGDTDSLFVYL 1361
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 87/196 (44%), Gaps = 44/196 (22%)
Query: 9 NIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
+ F VR+ IDHY A P P ++ K +VPVIRV+GST GQK C HIH
Sbjct: 2 DAFRVRLNCIDHYQATPTRYDPQLRKDAPLIEASKQPKVPVIRVFGSTETGQKVCAHIHG 61
Query: 66 ALPYLYVPCA---DIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAK 122
A PYL++ D P Y++ + L++++AL V R+ + V
Sbjct: 62 AFPYLFIEYRGPLDKPTV-----SEYIYRLHLSIDRALAVSYRRDQYREAPSFVARVTLV 116
Query: 123 KG---------------------------------GAVFDKSLQPHESHIPFLLQFLVDY 149
KG G V + QP+E+H+ +LLQF+ DY
Sbjct: 117 KGVPFYGFHVGYRFYLKIYMLNPAVMSRLADLLLQGVVMGQKFQPYEAHLQYLLQFMTDY 176
Query: 150 NLYGMGHLHLSKLKFR 165
NLYG +L +KFR
Sbjct: 177 NLYGCDYLDAENVKFR 192
>gi|121704870|ref|XP_001270698.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus clavatus
NRRL 1]
gi|119398844|gb|EAW09272.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus clavatus
NRRL 1]
Length = 1654
Score = 418 bits (1075), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/557 (41%), Positives = 331/557 (59%), Gaps = 46/557 (8%)
Query: 912 IAEPNACADCLQDISQISGPDGRSK-PTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRG 970
+++PNA +SQI GP ++ SQ G + + + ++ +S+EV +RG
Sbjct: 776 LSKPNA-------LSQIEGPTQKNDYGFKYSQKG-KSTSVEHHTQYMSSMSLEVHVNTRG 827
Query: 971 DLRPDPRYDSINVVALAFENDSDHAVE------IYVLLYCKSESHQRSLVGIPDCKVFVC 1024
L P+P D I+ + ++D + ++V + + H+ ++ ++
Sbjct: 828 VLLPNPEEDEISCIFWCIQSDGEDIDPNGILPGVHVGMIAQGNDHEPNISKALRIELDYE 887
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKI 1083
E+ L + + I+ DPDI+ G+++ S G+L ERA L +++SR +
Sbjct: 888 PTELDLINRLVDIVRYHDPDIITGYEVHNSSWGYLIERARKKYDFDLCDELSRVKSQ--- 944
Query: 1084 AAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMR 1143
A K+A D WG H S + V GR ++N+WR MR
Sbjct: 945 ----------------------AHGRFGKEA---DRWGFNHTSSIRVTGRHMINIWRSMR 979
Query: 1144 GEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIM 1203
GE+ L YT+E V +L R+IP FR LT W+ SG R + VEY V R ++NLEI+
Sbjct: 980 GELNLLQYTMENVVYHLLHRRIPHYSFRDLTAWYESGKPRNLLKVVEYFVSRIQMNLEIL 1039
Query: 1204 NQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPA 1263
+ ++I RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N+L +SP QV Q A
Sbjct: 1040 DSNELIPRTSEQARLLGIDFFSVFSRGSQFKVESLMFRIAKPENFLLVSPSRKQVGQQNA 1099
Query: 1264 MECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSF 1322
+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG+ + N +G +
Sbjct: 1100 LECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRARQWRGRNKMGFMDY 1159
Query: 1323 RPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQI 1382
+ VL LKD++ I PNG+MYV +VR+ +L R+L EIL TR+MVK + K+ ++
Sbjct: 1160 KRQPRVLELLKDKINIAPNGMMYVKQEVRQSLLARMLAEILETRVMVKTGM-KMDKDDKV 1218
Query: 1383 LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEK 1442
L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ E+
Sbjct: 1219 LQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIALIHSVER 1278
Query: 1443 WKAKVIYGDTDRYTVCI 1459
W A+V+YGDTD V +
Sbjct: 1279 WGAEVVYGDTDSLFVYL 1295
Score = 99.4 bits (246), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 87/188 (46%), Gaps = 30/188 (15%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F VR+ +DHY A PP+P D KV PVIR++G+T GQK C+H+H
Sbjct: 4 FQVRLNCVDHYQATPSEFDPPLPYRDGAVGKYDKSKV---PVIRIFGATETGQKVCVHVH 60
Query: 65 RALPYLYVPCADIPVQLRQE------------DDGYMHAISLALEKALKVKGSAGSKR-- 110
A PYLY+ D P+ Q+ D + L K + G R
Sbjct: 61 GAFPYLYIE-YDGPLNAEQDHALALNYRRNAYDKKTAFVAHITLVKGVPFYGYHVGYRFF 119
Query: 111 ------QHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKF 164
V+ L GAV + QP+ESH+ ++ Q++ DYNLYG ++ SK KF
Sbjct: 120 FKIYLLNPVYVTRLADLLLQGAVLKRPFQPYESHLQYVPQWMCDYNLYGCAYMKCSKAKF 179
Query: 165 RHPVPDAF 172
R +P+ F
Sbjct: 180 RSRIPELF 187
>gi|451852202|gb|EMD65497.1| hypothetical protein COCSADRAFT_180252 [Cochliobolus sativus ND90Pr]
Length = 1746
Score = 418 bits (1075), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/534 (42%), Positives = 323/534 (60%), Gaps = 36/534 (6%)
Query: 926 SQISGPDGRSKPTPLSQIGFQDPASAGAGEQ-LTLLSIEVQAESRGDLRPDPRYDSINVV 984
SQI GP ++ P Q+ S Q ++++S+EV SRG L PDP D I V
Sbjct: 839 SQIEGPTQKN-PHGCKYSQKQNNTSFKHQSQYMSIMSLEVHVNSRGSLVPDPAEDEIQCV 897
Query: 985 ALAFENDSDHAVE---IYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSF 1041
+ + + + + +L + + + +V E+ L + + I+ F
Sbjct: 898 FWSIQGEENVVTDQPRKGILCFSDEDGIAVRIAKQVSVEVEYEEDELDLINRLVDIVRQF 957
Query: 1042 DPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
DPDIL G+++ S G+L ERA L ++ISR LES G
Sbjct: 958 DPDILTGYEVHNSSWGYLIERARMKYEYNLCDEISRMKLESYGRFG-------------- 1003
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
K+A D WG TH S + V GR ++N+WR MRGE+ L YT+E V +
Sbjct: 1004 -----------KEA---DRWGFTHTSTIRVTGRHMINIWRAMRGELNLLQYTMENVVFHL 1049
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L ++IP LT W+ +G R + ++Y + R +LNL++++ D++ RTSE AR+ G
Sbjct: 1050 LHKRIPHYQHSDLTTWYTNGKPRDLAKVLDYFITRVQLNLDLLDANDIVPRTSEQARLLG 1109
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
DFF+V+SRGSQ++VES + R+A +N++ +SP QV Q A+ECLPLVMEP+S FY+
Sbjct: 1110 TDFFAVISRGSQFKVESTMFRIAKPENFILVSPSRKQVGRQNALECLPLVMEPQSAFYSS 1169
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDELLIP 1339
PV+VLDFQSLYPS+MIAYN C+ TCLG+I+ + N +G F+ + +L +KD + I
Sbjct: 1170 PVLVLDFQSLYPSVMIAYNYCYSTCLGRIVSWRGRNKMGFMDFKREPQLLELVKDHINIA 1229
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIAN 1399
PNG+MYV P++RK +L ++L EIL TR+MVK +K+ + L ++ N RQLALKL+AN
Sbjct: 1230 PNGMMYVKPEMRKSLLAKMLGEILETRVMVKSGMKE-DKDDKTLQKLLNNRQLALKLLAN 1288
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
VTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ EKW A+V+YGDTD
Sbjct: 1289 VTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIAIIHATEKWGAEVVYGDTD 1342
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 50/203 (24%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQG--GKVN--EVPVIRVYGSTPAGQKTCLHIHRA 66
F R+ ID+Y A P D G G++ EVPVIR +G+T GQK C HIH A
Sbjct: 40 FRFRLNCIDNYQATPT-DLDPLLRRNPGPAGRLGAPEVPVIRAFGATETGQKVCAHIHGA 98
Query: 67 LPYLYVPC-----ADIPVQLRQEDDGYMHAISLALEKALKV---KGSAGSKRQHVHECSL 118
LPYLY+ D+ + Y+ + ++++AL + + K +V SL
Sbjct: 99 LPYLYLEYNGSLETDVV-------NSYILDLRTSIDQALATAYRRSTLDGKSTYVGHISL 151
Query: 119 VRAK------------------------------KGGAVFDKSLQPHESHIPFLLQFLVD 148
V+ GA+ D+ QP+ESH+ +LLQ++ D
Sbjct: 152 VKGVPFFGYHVGYKVFLKVYLLNPMHMTRFADLLHQGAILDRVFQPYESHLQYLLQWMCD 211
Query: 149 YNLYGMGHLHLSKLKFRHPVPDA 171
YNLYG ++ +K++FR P+PD+
Sbjct: 212 YNLYGCDYIDCAKVQFRGPIPDS 234
>gi|317151429|ref|XP_001824655.2| DNA polymerase zeta catalytic subunit [Aspergillus oryzae RIB40]
Length = 1670
Score = 418 bits (1074), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/567 (39%), Positives = 333/567 (58%), Gaps = 54/567 (9%)
Query: 909 EGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSI 962
E H+ EPN + L SQI GP T ++ GF Q S Q ++++S+
Sbjct: 782 ERHLHEPNTKLNVL---SQIEGP------TQKNEYGFKYSQKGRSTSVEHQTQYMSIMSL 832
Query: 963 EVQAESRGDLRPDPRYDSINVVALAFENDSD--------HAVEIYVLLYCKSESHQRSLV 1014
EV +RG L P+P D I+ ++ ++D + V + ++ + + + +L
Sbjct: 833 EVHVNTRGVLAPNPEEDEISCISWCIQSDDEDLDVNSHLSGVRVGMVFQGEYDKPEETLS 892
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLND 1073
+ E+ L + + ++ +DPDI+ G+++ GS G++ ERA + ++
Sbjct: 893 KALRIDLEHEPTELDLINRLVDLVRLYDPDIITGYEVHNGSWGYVIERARKKYDFDICDE 952
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+SR + A KDA D WG H S + V GR
Sbjct: 953 LSRVKSQ-------------------------AHGRFGKDA---DRWGFNHTSSIRVSGR 984
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
++N+WR MR E+ L Y++E V +L R+IP FR LT+W+ SG R + V+Y V
Sbjct: 985 HMINIWRAMRSELNLLQYSMENVVFHLLHRRIPHYSFRDLTEWYQSGKPRDLMKVVDYFV 1044
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
R ++NLEI+ +++ R SE AR+ GIDF+SV SRGSQ++VES++ R+A +N+L +SP
Sbjct: 1045 SRVQMNLEILESNELVPRISEQARLLGIDFYSVFSRGSQFKVESLMFRIAKPENFLLVSP 1104
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG++ +
Sbjct: 1105 SKKQVGQQNALECLPLVMEPQSDFYTSPLIVLDFQSLYPSIMIAYNYCYSTFLGRVHQWR 1164
Query: 1314 -ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ +G + ++ +L KD++ I PNG+MY P+VR+ +L R+L EIL TR+MVK
Sbjct: 1165 GRDKMGFTEYQRQPRLLELFKDKINIAPNGMMYAKPEVRRSLLARMLAEILETRVMVKTG 1224
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+ K+ + L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEK
Sbjct: 1225 M-KMDKDDKALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEK 1283
Query: 1433 AISFVNENEKWKAKVIYGDTDRYTVCI 1459
AI+ ++ E+W A+V+YGDTD V +
Sbjct: 1284 AIALIHSVERWGAEVVYGDTDSLFVYL 1310
Score = 100 bits (248), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 44/199 (22%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F VR+ +DHY A PP P D S + +VPVIR++G+T GQ+ C+H+H
Sbjct: 4 FQVRLNCVDHYQAAPSEFDPPFPYRD---PSTEKYDRPKVPVIRIFGATETGQRVCVHVH 60
Query: 65 RALPYLYVPC-ADI-PVQLRQEDDGYMHAISLALEKALKVKGSAGSKR-QHVHECSLVRA 121
A PYLYVP D+ P ++R+ +I AL AL + +A K+ V +LV+
Sbjct: 61 GAFPYLYVPYDGDLSPEEVRRAIRDLHISIDHAL--ALSYRRNAYDKKAAFVAHITLVKG 118
Query: 122 KK------------------------------GGAVFDKSLQPHESHIPFLLQFLVDYNL 151
GA+ +SLQP+ESH+ ++ Q++ DY+L
Sbjct: 119 VPFYGYHVGYRFFFKVYLLSPIYTTRVADLLLQGAILKRSLQPYESHLQYIPQWMCDYSL 178
Query: 152 YGMGHLHLSKLKFRHPVPD 170
YG ++ SK+KFR PVP+
Sbjct: 179 YGCAYMKCSKVKFRSPVPE 197
>gi|258573513|ref|XP_002540938.1| hypothetical protein UREG_00451 [Uncinocarpus reesii 1704]
gi|237901204|gb|EEP75605.1| hypothetical protein UREG_00451 [Uncinocarpus reesii 1704]
Length = 1482
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/507 (42%), Positives = 309/507 (60%), Gaps = 39/507 (7%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND--------SDHAVEIYVLLYCKSES 1008
++++S+E+ +RG L P+P D ++ + ++ S++ ++ +L E+
Sbjct: 637 MSVMSLEIHVNTRGTLAPNPEEDEVSCIFWCIQSGERSLDASGSENDIQTGILAVADPEN 696
Query: 1009 HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLG 1067
+ + + +V E+ L + + + DPDIL G+++ GS G+L ERA
Sbjct: 697 IRGKVWHDANAEVEEEPSELDLLTKLVDSVRYHDPDILTGYEVHNGSWGYLIERARLKYD 756
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
L +++SR +S G D WG H S
Sbjct: 757 YDLCDELSRVKTDSHGRFGKES----------------------------DRWGFNHTST 788
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ V GR ++N+WR MRGE+ L YT+E V VL R+IP PF VLTKWF S R +
Sbjct: 789 IRVTGRHMINIWRAMRGELNLLQYTMENVVFHVLHRRIPHYPFHVLTKWFKSTKPRNIVK 848
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
V Y++ R KLNL+I++ ++I+RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N
Sbjct: 849 VVNYLIARTKLNLKILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPEN 908
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
++ ISP QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG
Sbjct: 909 FILISPSKAQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFLG 968
Query: 1308 KILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTR 1366
+I+ + N +G ++ +L L+D++ I PNG+MY P+VRK +L ++L EIL TR
Sbjct: 969 RIVDWRGRNKMGFIDYQRQQGLLELLQDQINISPNGIMYTKPEVRKSLLAKMLTEILETR 1028
Query: 1367 IMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
+MVK +K + L R+ N RQLALKLIANVTYGYT+A FSGRMPC E+ADSIVQ
Sbjct: 1029 VMVKGGMKA-NKEDRALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCTEIADSIVQTA 1087
Query: 1427 RSTLEKAISFVNENEKWKAKVIYGDTD 1453
R TLEKAI+ ++ E+W A+V+YGDTD
Sbjct: 1088 RETLEKAIALIHSVERWGAEVVYGDTD 1114
Score = 48.5 bits (114), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 130 KSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
+ LQP+ESH+ ++ Q++ DYNLYG ++ K FR PVP
Sbjct: 3 RVLQPYESHMQYVPQWMCDYNLYGCSYIECRKATFRGPVP 42
>gi|198432213|ref|XP_002124430.1| PREDICTED: similar to REV3-like, catalytic subunit of DNA polymerase
zeta RAD54 like (S. cerevisiae) [Ciona intestinalis]
Length = 2161
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 312/514 (60%), Gaps = 38/514 (7%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSL- 1013
+ +TLLSIE+ ++R DLRPDP D I + + DS + +L + +S++ L
Sbjct: 1322 QHVTLLSIELHCKTRIDLRPDPEMDEIRALFYGVQTDSSPEIITGAILVDEQKSNRNLLH 1381
Query: 1014 -VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
G+ + E LF I+ DPD+L+G++IQ S G+L RAAHLG+ L
Sbjct: 1382 RSGVTCLNAVYVASENLLFEELASIVLLHDPDMLLGYEIQMLSWGYLFARAAHLGVDLCR 1441
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
ISR P + + D+E D +G + S +HV G
Sbjct: 1442 GISRVPGDKTKSKMDAEA---------------------------DAYGADNMSEIHVVG 1474
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRA-RYRCVEY 1191
R++LN+WRLMR E+ L Y E+VA +L + P F+ LT+ +S G R+R ++Y
Sbjct: 1475 RVMLNIWRLMRTELALCDYKFESVAFHLLHERHPVYSFQTLTQGISSNRGDVIRHRVLDY 1534
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ R NL++M+Q DM+ RTSELAR+FGI F+ VL+RG+Q+RVESM+LR+ H+QNY+A+
Sbjct: 1535 YMCRVIGNLKLMSQQDMVGRTSELARLFGIQFYDVLTRGTQFRVESMMLRIVHSQNYVAV 1594
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-- 1309
SP Q A A EC+ LVMEPES FY +PVVV+DFQSLYPS++IAYN C+ TCLG++
Sbjct: 1595 SPNQMQRAYMKAPECIALVMEPESRFYHEPVVVVDFQSLYPSIIIAYNYCYSTCLGRVQH 1654
Query: 1310 LPSKEN-TLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTR 1366
L S N G +S + L L +D + + PN V YV +RKG+LP +LEEIL TR
Sbjct: 1655 LGSHNNFPFGCTSLKVPPRTLHKLLKRDGVTVAPNAVAYVKSFIRKGILPTMLEEILETR 1714
Query: 1367 IMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
IMVK +IKK S R+ + RQL LKLIANVTYGYT+A FSGRMPC E+ADSIV
Sbjct: 1715 IMVKTSIKKCDDS--ATKRMLDHRQLGLKLIANVTYGYTSANFSGRMPCVEIADSIVHKA 1772
Query: 1427 RSTLEKAISFVNENE-KWKAKVIYGDTDRYTVCI 1459
R TLE++I VN N +W +V+YGDTD V +
Sbjct: 1773 RETLERSIRLVNSNHTRWGGRVVYGDTDSMFVAL 1806
>gi|83773395|dbj|BAE63522.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863054|gb|EIT72368.1| DNA polymerase zeta, catalytic subunit [Aspergillus oryzae 3.042]
Length = 1566
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/561 (39%), Positives = 331/561 (59%), Gaps = 54/561 (9%)
Query: 909 EGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSI 962
E H+ EPN + L SQI GP T ++ GF Q S Q ++++S+
Sbjct: 678 ERHLHEPNTKLNVL---SQIEGP------TQKNEYGFKYSQKGRSTSVEHQTQYMSIMSL 728
Query: 963 EVQAESRGDLRPDPRYDSINVVALAFENDSD--------HAVEIYVLLYCKSESHQRSLV 1014
EV +RG L P+P D I+ ++ ++D + V + ++ + + + +L
Sbjct: 729 EVHVNTRGVLAPNPEEDEISCISWCIQSDDEDLDVNSHLSGVRVGMVFQGEYDKPEETLS 788
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLND 1073
+ E+ L + + ++ +DPDI+ G+++ GS G++ ERA + ++
Sbjct: 789 KALRIDLEHEPTELDLINRLVDLVRLYDPDIITGYEVHNGSWGYVIERARKKYDFDICDE 848
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+SR + A KDA D WG H S + V GR
Sbjct: 849 LSRVKSQ-------------------------AHGRFGKDA---DRWGFNHTSSIRVSGR 880
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
++N+WR MR E+ L Y++E V +L R+IP FR LT+W+ SG R + V+Y V
Sbjct: 881 HMINIWRAMRSELNLLQYSMENVVFHLLHRRIPHYSFRDLTEWYQSGKPRDLMKVVDYFV 940
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
R ++NLEI+ +++ R SE AR+ GIDF+SV SRGSQ++VES++ R+A +N+L +SP
Sbjct: 941 SRVQMNLEILESNELVPRISEQARLLGIDFYSVFSRGSQFKVESLMFRIAKPENFLLVSP 1000
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG++ +
Sbjct: 1001 SKKQVGQQNALECLPLVMEPQSDFYTSPLIVLDFQSLYPSIMIAYNYCYSTFLGRVHQWR 1060
Query: 1314 -ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ +G + ++ +L KD++ I PNG+MY P+VR+ +L R+L EIL TR+MVK
Sbjct: 1061 GRDKMGFTEYQRQPRLLELFKDKINIAPNGMMYAKPEVRRSLLARMLAEILETRVMVKTG 1120
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+ K+ + L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEK
Sbjct: 1121 M-KMDKDDKALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEK 1179
Query: 1433 AISFVNENEKWKAKVIYGDTD 1453
AI+ ++ E+W A+V+YGDTD
Sbjct: 1180 AIALIHSVERWGAEVVYGDTD 1200
Score = 100 bits (248), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 44/199 (22%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F VR+ +DHY A PP P D S + +VPVIR++G+T GQ+ C+H+H
Sbjct: 4 FQVRLNCVDHYQAAPSEFDPPFPYRD---PSTEKYDRPKVPVIRIFGATETGQRVCVHVH 60
Query: 65 RALPYLYVPC-ADI-PVQLRQEDDGYMHAISLALEKALKVKGSAGSKR-QHVHECSLVRA 121
A PYLYVP D+ P ++R+ +I AL AL + +A K+ V +LV+
Sbjct: 61 GAFPYLYVPYDGDLSPEEVRRAIRDLHISIDHAL--ALSYRRNAYDKKAAFVAHITLVKG 118
Query: 122 KK------------------------------GGAVFDKSLQPHESHIPFLLQFLVDYNL 151
GA+ +SLQP+ESH+ ++ Q++ DY+L
Sbjct: 119 VPFYGYHVGYRFFFKVYLLSPIYTTRVADLLLQGAILKRSLQPYESHLQYIPQWMCDYSL 178
Query: 152 YGMGHLHLSKLKFRHPVPD 170
YG ++ SK+KFR PVP+
Sbjct: 179 YGCAYMKCSKVKFRSPVPE 197
>gi|343428638|emb|CBQ72168.1| probable catalytic subunit of DNA polymerase zeta UPR-1 [Sporisorium
reilianum SRZ2]
Length = 1677
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/514 (42%), Positives = 314/514 (61%), Gaps = 38/514 (7%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI-------YVLLYCKSE 1007
+ +T L++EV +RG L PDP +D++ + +F+N+ +H + L+ E
Sbjct: 788 QHVTTLAVEVLTTTRGTLFPDPAFDAVQAIIYSFQNEDEHLQDTGSRPDLRTGLIIVAPE 847
Query: 1008 SHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HL 1066
+G+ + V E+ LF+ I ++ +FDP+I++GW+I S G++ ERA+
Sbjct: 848 DVNVDRLGLSHLALEVVEDELELFNTLIDLVRAFDPEIIVGWEIHSSSWGYIIERASKEY 907
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
L+ I R + + AG G +DN + T +S
Sbjct: 908 DFDLVPQIGRAIVHNTGRAG-------GKSDN---------------------YAYTQSS 939
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
L + GR LN+WRLM+GE+ LN+YT E V +L R+IP + LT WF SG
Sbjct: 940 ALRITGRHTLNLWRLMKGELTLNLYTFENVCYHLLHRRIPKFSHQTLTHWFTSGRAELVG 999
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
+ + Y V +L LEI+++ + + RT+E AR++GIDFFSV+SRGSQ++VES++LR+A +
Sbjct: 1000 KALLYYVDMVELELEIISESEFVLRTAEFARIYGIDFFSVISRGSQFKVESIMLRIAKPE 1059
Query: 1247 NYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
N++ ISP QV Q A ECLPL+MEP+S FY +VVLDFQSLYPS+MIAYNLC+ TCL
Sbjct: 1060 NFVLISPSRAQVGKQNAAECLPLIMEPQSAFYKGLLVVLDFQSLYPSIMIAYNLCYSTCL 1119
Query: 1307 GKILPSKENT-LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
G++ K + GV+ + P +L L D + I NG+++V P VRK +L ++L EIL T
Sbjct: 1120 GRVAGFKGTSKFGVTEYAPPKGLLSLLSDHVNISSNGLLFVKPDVRKSLLAKMLSEILDT 1179
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R+MVK ++K + + RI NARQL+LKL+ANVTYGYT+A FSGRMPC E+AD+IVQ
Sbjct: 1180 RVMVKGSMKGTK-ADKSFQRIQNARQLSLKLLANVTYGYTSASFSGRMPCVEIADAIVQT 1238
Query: 1426 GRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
GR TLEKA+ +N +W A+V+YGDTD V +
Sbjct: 1239 GRETLEKAMDLINGTAEWGAQVVYGDTDSLFVYL 1272
Score = 96.7 bits (239), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIP-GYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCL 61
DS F VR+++IDH + P P C + +G + +VP++R++G+TPAGQ+ CL
Sbjct: 21 DSASSDPFFRVRLINIDHVLTVPTPLDRTQCAFNAEGQSLRKVPILRIFGATPAGQRVCL 80
Query: 62 HIHRALPYLYVPC---------------------ADIPVQLRQ-----EDDGYMHAISLA 95
H+H PY Y+ A + LR+ E + ++ AI L
Sbjct: 81 HVHNVYPYCYIQYKGSLDPDDVLRYIHRLGRELNAAMAASLRRNPDDPESNQFIAAIHLC 140
Query: 96 LEKALKVKG-----SAGSKRQHV---HECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLV 147
K + G S K V H + + G V QP E HI + LQF++
Sbjct: 141 --KGVNFYGYHVGYSYFLKISFVDPSHNYRIAAILESGGVMKTVFQPFEIHIRYQLQFML 198
Query: 148 DYNLYGMGHLHLSKLKFRHPVPDA 171
DYN++G +L L ++FR P+P+
Sbjct: 199 DYNIFGCDYLDLGDVRFRLPIPEG 222
>gi|290981126|ref|XP_002673282.1| ATREV3; DNA binding protein-like protein [Naegleria gruberi]
gi|284086864|gb|EFC40538.1| ATREV3; DNA binding protein-like protein [Naegleria gruberi]
Length = 1980
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/532 (43%), Positives = 333/532 (62%), Gaps = 35/532 (6%)
Query: 953 AGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHA--VEIYVLLYCKSESH- 1009
+ + L+++ IE +R P+P YDS+ + + ++N ++ A +E ++L+ + E+
Sbjct: 1089 SKQNLSVMCIECHVLTRATFLPNPLYDSVQTIVITYQNCANIAESLEHWLLVNREMEADD 1148
Query: 1010 --QRSLVGIPDC--KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
QR L P +V E L+ FI +LC DPDIL+G++IQ LG+L ER
Sbjct: 1149 AAQRPL-AFPTHFDRVIEFKNEKDLYEGFIDVLCKVDPDILLGYEIQTEGLGYLIERGFL 1207
Query: 1066 -LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
+G + +ISR + + ++ ++ T+ + E L K E+ R
Sbjct: 1208 VMGRNVCFEISRV---ANFQSDKPKVDKKKATNT--SNNFQREKALKK----AQEYARNK 1258
Query: 1125 ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRA 1184
SG+ + GR+V+NVWR+M GE+KL+MYT+ V VL R+IP + LT S
Sbjct: 1259 QSGVMIKGRVVMNVWRIMNGELKLDMYTLHNVVFNVLGRRIPFYSHQTLTDLSHSCSHEK 1318
Query: 1185 ---RYRCV-EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLL 1240
YR + +Y + + + LE++N LD++NRT EL +V+GI+FFSV+SRGSQYRVESM+L
Sbjct: 1319 DSFEYRVILQYYLIKTSVTLEVLNHLDILNRTGELGKVYGIEFFSVISRGSQYRVESMML 1378
Query: 1241 RLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNL 1300
RLA +NY+A+SP QV Q A+ECLPLVMEP+S Y +P++VLDFQSLYPS++IAYNL
Sbjct: 1379 RLARLRNYVALSPTRKQVMEQAAIECLPLVMEPQSKLYTNPMIVLDFQSLYPSIIIAYNL 1438
Query: 1301 CFCTCLGKI--LPSKENTLG-VSSFRPDLHVLRDLKD---------ELLIPPNGVMYVPP 1348
C+ TCLGK+ + K+ LG + ++ P+ + + L+D ++ I PN ++V P
Sbjct: 1439 CYSTCLGKLAFVDRKKTKLGTLENYEPNNELRKLLQDRTGSDSIEEDIFITPNQCLFVKP 1498
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAG 1408
VR+GVLPR+ EIL+TRIMVKQA+K+ + + RI NARQL LKLIANVTYGYT+A
Sbjct: 1499 NVRQGVLPRMCSEILNTRIMVKQAMKETSKDDKETQRILNARQLGLKLIANVTYGYTSAN 1558
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTV-CI 1459
FSGRMP ++LAD+IVQ R+TLE AI VNE K ++ YGDTD V CI
Sbjct: 1559 FSGRMPLSDLADAIVQLARATLENAIDIVNEKFPGKCRIAYGDTDSLFVECI 1610
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 124 GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
G V +E+HIPF LQF++DYNLYGMG L + KL FR P
Sbjct: 158 NGTVMGHRFSVYEAHIPFPLQFMMDYNLYGMGDLSVEKLYFRLP 201
>gi|358369172|dbj|GAA85787.1| DNA polymerase zeta catalytic subunit [Aspergillus kawachii IFO 4308]
Length = 1675
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/551 (42%), Positives = 326/551 (59%), Gaps = 63/551 (11%)
Query: 925 ISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRY 978
+SQI GP T + GF Q S Q ++++S+EV +RG L P+P
Sbjct: 795 LSQIEGP------TQKNGYGFKYSQKGRSTSVEHQTQYMSIMSLEVHVNTRGVLLPNPEE 848
Query: 979 DSINVVALAFEN-----DSDHAVE-IYVLLYCKSESHQRSLVGIPDCKVFVC-------- 1024
D I V ++ D++ V ++V + +SE H R PD K
Sbjct: 849 DEITCVFWCLQSEDEDLDANGTVPGVHVGMISQSE-HDR-----PDTKASKALRIDWEHE 902
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKI 1083
+ E+ L + + I+ DPDI+ G+++ S G+L ERA + +++SR +
Sbjct: 903 TSELDLINRVVDIVRWHDPDIITGYEVHNSSWGYLIERARKKYDFDICDELSRVKSQ--- 959
Query: 1084 AAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMR 1143
A KDA D WG H S + V GR ++N+WR MR
Sbjct: 960 ----------------------AHGRFGKDA---DRWGFNHTSSIRVTGRHMINIWRAMR 994
Query: 1144 GEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIM 1203
GE+ L YT E VA +L R++P F+ LT W+ SG R + VEY V R +++LEI+
Sbjct: 995 GELNLLQYTQENVAFHLLHRRVPHYSFQDLTDWYRSGKPRNILKVVEYFVSRVQMDLEIL 1054
Query: 1204 NQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPA 1263
++I RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N++ +SP QV Q A
Sbjct: 1055 ESNELIPRTSEQARLLGIDFFSVFSRGSQFKVESLMFRIAKPENFILVSPSRKQVGQQNA 1114
Query: 1264 MECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSF 1322
+ECLPLVMEP+S FY P+VVLDFQSLYPS+MIAYN C+ T LG+ + N +G + +
Sbjct: 1115 LECLPLVMEPQSDFYTSPLVVLDFQSLYPSIMIAYNYCYSTFLGRAHQWRGRNKMGFTDY 1174
Query: 1323 RPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQI 1382
+ +L L+D++ I PNG++Y P+VRK +L R+L EIL TR+MVK + KL +
Sbjct: 1175 KRQPRILELLQDKINIAPNGMIYAKPEVRKSLLARMLAEILETRVMVKNGM-KLDKDDKA 1233
Query: 1383 LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEK 1442
L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+F++ E+
Sbjct: 1234 LQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIAFIHSVER 1293
Query: 1443 WKAKVIYGDTD 1453
W A+V+YGDTD
Sbjct: 1294 WGAEVVYGDTD 1304
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 50/204 (24%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVN--EVPVIRVYGSTPAGQKTCLH 62
F VR+ +DHY A PP+P Y GK + +VPVIR++G+T GQK C+H
Sbjct: 4 FQVRLNCVDHYQATPSELDPPLP-----YRDGAAGKNDRSKVPVIRIFGATETGQKVCVH 58
Query: 63 IHRALPYLYVPC-ADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRA 121
+H A PYLYV D+ ++ + ++ L+++ AL V + + + + +
Sbjct: 59 VHGAFPYLYVEYDGDLET---EKVSSAIRSLRLSIDHALAVSYNRNENAKKIAFVAHITL 115
Query: 122 KKG---------------------------------GAVFDKSLQPHESHIPFLLQFLVD 148
KG GAV + LQP+ESH+ F+ Q++ D
Sbjct: 116 VKGVPFYGYHVGYKFYFKIYLMNPIYMTRLADLLLQGAVLKRPLQPYESHLQFVPQWMCD 175
Query: 149 YNLYGMGHLHLSKLKFRHPVPDAF 172
Y+LYG +L SK+KFR PVP+ F
Sbjct: 176 YSLYGCAYLKCSKVKFRSPVPEYF 199
>gi|317032425|ref|XP_001394913.2| DNA polymerase zeta catalytic subunit [Aspergillus niger CBS 513.88]
gi|350631625|gb|EHA19996.1| hypothetical protein ASPNIDRAFT_179788 [Aspergillus niger ATCC 1015]
Length = 1668
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/557 (41%), Positives = 328/557 (58%), Gaps = 63/557 (11%)
Query: 925 ISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRY 978
+SQI GP T + GF Q S Q ++++S+EV +RG L P+P
Sbjct: 793 LSQIEGP------TQKNDYGFKYSQKGKSTSVEHQTQYMSIMSLEVHVNTRGVLSPNPEE 846
Query: 979 DSINVVALAFEN-----DSDHAVE-IYVLLYCKSESHQRSLVGIPDCKVFVC-------- 1024
D I V ++ D++ V ++V + ++E + PD K
Sbjct: 847 DEITCVFWCLQSEDEDLDANGTVPGVHVGMISQAEDDR------PDIKASKALRFDWEHE 900
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKI 1083
+ E+ L + + I+ DPDI+ G+++ S G+L ERA + +++SR +
Sbjct: 901 TTELDLINRVVDIVRWHDPDIITGYEVHNSSWGYLIERARKKYDFDICDELSRVKSQ--- 957
Query: 1084 AAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMR 1143
A KDA D WG H S + V GR ++N+WR MR
Sbjct: 958 ----------------------AHGRFGKDA---DRWGFNHTSSIRVTGRHMINIWRAMR 992
Query: 1144 GEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIM 1203
GE+ L YT E VA +L R++P F+ LT+W+ SG R + VEY V R +++LEI+
Sbjct: 993 GELNLLQYTQENVAFHLLHRRVPHYSFQDLTEWYRSGKPRNILKVVEYFVSRVQMDLEIL 1052
Query: 1204 NQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPA 1263
++I RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N++ +SP QV Q A
Sbjct: 1053 ESNELIPRTSEQARLLGIDFFSVFSRGSQFKVESLMFRIAKPENFILVSPSRKQVGQQNA 1112
Query: 1264 MECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSF 1322
+ECLPLVMEP+S FY P+VVLDFQSLYPS+MIAYN C+ T LG+ + N +G + +
Sbjct: 1113 LECLPLVMEPQSDFYTSPLVVLDFQSLYPSIMIAYNYCYSTFLGRAHQWRGRNKMGFTDY 1172
Query: 1323 RPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQI 1382
+ +L L+D++ I PNG+MY P+VRK +L R+L EIL TR+MVK + K+ +
Sbjct: 1173 KRQPRMLELLQDKINIAPNGMMYAKPEVRKSLLARMLAEILETRVMVKNGM-KIDKDDKA 1231
Query: 1383 LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEK 1442
L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+F++ E+
Sbjct: 1232 LQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIAFIHSVER 1291
Query: 1443 WKAKVIYGDTDRYTVCI 1459
W A+V+YGDTD V +
Sbjct: 1292 WGAEVVYGDTDSLFVYL 1308
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 46/202 (22%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F VR+ +DHY A PP+P D + ++VPVIR++G+T GQK C+H+H
Sbjct: 4 FQVRLNCVDHYQATPSDLDPPLPHGD---GAAGKNDRSKVPVIRIFGATETGQKVCVHVH 60
Query: 65 RALPYLYVPC-ADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKK 123
A PYLYV D+ ++ + + ++ L+++ AL V + + + + + K
Sbjct: 61 GAFPYLYVEYDGDLET---EKVNSALRSLRLSIDHALAVSYNRNENAKKIPFVAHITLVK 117
Query: 124 G---------------------------------GAVFDKSLQPHESHIPFLLQFLVDYN 150
G GA+ + LQP+ESH+ F+ Q++ DY+
Sbjct: 118 GVPFYGYHVGYKFYFKIYLMSPIYMTRLADLLLQGAILKRPLQPYESHLQFIPQWMCDYS 177
Query: 151 LYGMGHLHLSKLKFRHPVPDAF 172
LYG +L SK+KFR P+P+ F
Sbjct: 178 LYGCAYLKCSKVKFRSPIPEYF 199
>gi|134079611|emb|CAK40828.1| unnamed protein product [Aspergillus niger]
Length = 1668
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/557 (41%), Positives = 328/557 (58%), Gaps = 63/557 (11%)
Query: 925 ISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRY 978
+SQI GP T + GF Q S Q ++++S+EV +RG L P+P
Sbjct: 793 LSQIEGP------TQKNDYGFKYSQKGKSTSVEHQTQYMSIMSLEVHVNTRGVLSPNPEE 846
Query: 979 DSINVVALAFEN-----DSDHAVE-IYVLLYCKSESHQRSLVGIPDCKVFVC-------- 1024
D I V ++ D++ V ++V + ++E + PD K
Sbjct: 847 DEITCVFWCLQSEDEDLDANGTVPGVHVGMISQAEDDR------PDIKASKALRFDWEHE 900
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKI 1083
+ E+ L + + I+ DPDI+ G+++ S G+L ERA + +++SR +
Sbjct: 901 TTELDLINRVVDIVRWHDPDIITGYEVHNSSWGYLIERARKKYDFDICDELSRVKSQ--- 957
Query: 1084 AAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMR 1143
A KDA D WG H S + V GR ++N+WR MR
Sbjct: 958 ----------------------AHGRFGKDA---DRWGFNHTSSIRVTGRHMINIWRAMR 992
Query: 1144 GEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIM 1203
GE+ L YT E VA +L R++P F+ LT+W+ SG R + VEY V R +++LEI+
Sbjct: 993 GELNLLQYTQENVAFHLLHRRVPHYSFQDLTEWYRSGKPRNILKVVEYFVSRVQMDLEIL 1052
Query: 1204 NQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPA 1263
++I RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N++ +SP QV Q A
Sbjct: 1053 ESNELIPRTSEQARLLGIDFFSVFSRGSQFKVESLMFRIAKPENFILVSPSRKQVGQQNA 1112
Query: 1264 MECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSF 1322
+ECLPLVMEP+S FY P+VVLDFQSLYPS+MIAYN C+ T LG+ + N +G + +
Sbjct: 1113 LECLPLVMEPQSDFYTSPLVVLDFQSLYPSIMIAYNYCYSTFLGRAHQWRGRNKMGFTDY 1172
Query: 1323 RPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQI 1382
+ +L L+D++ I PNG+MY P+VRK +L R+L EIL TR+MVK + K+ +
Sbjct: 1173 KRQPRMLELLQDKINIAPNGMMYAKPEVRKSLLARMLAEILETRVMVKNGM-KIDKDDKA 1231
Query: 1383 LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEK 1442
L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+F++ E+
Sbjct: 1232 LQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIAFIHSVER 1291
Query: 1443 WKAKVIYGDTDRYTVCI 1459
W A+V+YGDTD V +
Sbjct: 1292 WGAEVVYGDTDSLFVYL 1308
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 46/202 (22%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F VR+ +DHY A PP+P D + ++VPVIR++G+T GQK C+H+H
Sbjct: 4 FQVRLNCVDHYQATPSDLDPPLPHGD---GAAGKNDRSKVPVIRIFGATETGQKVCVHVH 60
Query: 65 RALPYLYVPC-ADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKK 123
A PYLYV D+ ++ + + ++ L+++ AL V + + + + + K
Sbjct: 61 GAFPYLYVEYDGDLET---EKVNSALRSLRLSIDHALAVSYNRNENAKKIPFVAHITLVK 117
Query: 124 G---------------------------------GAVFDKSLQPHESHIPFLLQFLVDYN 150
G GA+ + LQP+ESH+ F+ Q++ DY+
Sbjct: 118 GVPFYGYHVGYKFYFKIYLMSPIYMTRLADLLLQGAILKRPLQPYESHLQFIPQWMCDYS 177
Query: 151 LYGMGHLHLSKLKFRHPVPDAF 172
LYG +L SK+KFR P+P+ F
Sbjct: 178 LYGCAYLKCSKVKFRSPIPEYF 199
>gi|119493035|ref|XP_001263773.1| DNA polymerase zeta catalytic subunit, putative [Neosartorya fischeri
NRRL 181]
gi|119411933|gb|EAW21876.1| DNA polymerase zeta catalytic subunit, putative [Neosartorya fischeri
NRRL 181]
Length = 1686
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/550 (41%), Positives = 319/550 (58%), Gaps = 51/550 (9%)
Query: 926 SQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRYD 979
SQI GP T + GF Q S Q ++ +S+EV +RG L P+P D
Sbjct: 812 SQIEGP------TQKNDYGFKYSQKGKSTSVEHQTQYMSSMSLEVHVNTRGVLLPNPEED 865
Query: 980 SINVVALAFENDSDH--------AVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLF 1031
I+ + ++D V + ++ + L ++ E+ L
Sbjct: 866 EISCIFWCIQSDDQDIDVNGNLPGVHVGMIAQGSGDGPTSKLSKALRIELEHEPTELDLI 925
Query: 1032 SHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEI 1090
+ + I+ DPDI+ G+++ GS G+L ERA + +++SR +
Sbjct: 926 NRLVDIVRYHDPDIITGYEVHNGSWGYLIERARKKYDFDICDELSRVRSQ---------- 975
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
A KDA D WG H S + V GR ++N+WR MR E+ L
Sbjct: 976 ---------------AHGRFGKDA---DRWGFNHTSSIRVTGRHMINIWRAMRSELNLLQ 1017
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
YT+E V +L R+IP +R LT W+ SG R + VEY V R ++NLEI+ ++I
Sbjct: 1018 YTMENVVFHLLHRRIPHYSYRDLTAWYQSGKPRDLLKVVEYFVSRVQMNLEILESNELIP 1077
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +NYL +SP QV Q A+ECLPLV
Sbjct: 1078 RTSEQARLLGIDFFSVFSRGSQFKVESLMFRIAKPENYLLVSPSRRQVGQQNALECLPLV 1137
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-LPSKENTLGVSSFRPDLHVL 1329
MEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG++ L N +G ++ VL
Sbjct: 1138 MEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRVSLWRGRNKMGFMDYKRQPRVL 1197
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
LKD++ I PNG+MY P+VR+ +L R+L EIL TR+MVK + K+ ++L R+ N
Sbjct: 1198 ELLKDKINIAPNGMMYAKPEVRQSLLARMLAEILETRVMVKTGM-KMDKDDKVLQRLLNN 1256
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIY 1449
RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ E+W A+V+Y
Sbjct: 1257 RQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIALIHSVERWGAEVVY 1316
Query: 1450 GDTDRYTVCI 1459
GDTD V +
Sbjct: 1317 GDTDSLFVYL 1326
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 94/189 (49%), Gaps = 32/189 (16%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVN--EVPVIRVYGSTPAGQKTCLH 62
F VR+ +DHY A PP+P Y GK + +VPVIR++G+T GQK C+H
Sbjct: 4 FQVRLNCVDHYQATPSEFDPPLP-----YRDGAAGKYDRWKVPVIRIFGATETGQKVCVH 58
Query: 63 IHRALPYLYV-------PCADIPVQLRQEDDGYMHAIS----LALEKALKVKGSAGSKR- 110
+H A PYLY+ P D + L + Y + + L K + G R
Sbjct: 59 VHGAFPYLYIEYDGPLDPEQDHALALNYRRNAYDKKTAFVAHITLVKGVPFYGYHVGYRF 118
Query: 111 -------QHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLK 163
V+ L GAV + LQP+ESH+ ++ Q++ DYNLYG ++ S++K
Sbjct: 119 FFKIYLLDPVYTTRLADLLLQGAVLKRPLQPYESHLQYVPQWMCDYNLYGCAYMKCSRVK 178
Query: 164 FRHPVPDAF 172
FR P+P+ +
Sbjct: 179 FRSPIPEYY 187
>gi|451997476|gb|EMD89941.1| hypothetical protein COCHEDRAFT_1178083 [Cochliobolus heterostrophus
C5]
Length = 1754
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/534 (41%), Positives = 323/534 (60%), Gaps = 36/534 (6%)
Query: 926 SQISGPDGRSKPTPLSQIGFQDPASAGAGEQ-LTLLSIEVQAESRGDLRPDPRYDSINVV 984
SQI GP ++ P Q+ AS Q ++++S+EV SRG L PDP D I V
Sbjct: 847 SQIEGPTQKN-PHGCKYSQKQNSASVRHQSQYMSIMSLEVHVNSRGSLLPDPAEDEIQCV 905
Query: 985 ALAFENDSDHAVE---IYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSF 1041
+ +++ + + +L + + + +V E+ L + + I+ F
Sbjct: 906 FWSIQDEENVVTDRPRKGILCFSDKDGIAVRIAKQVSVEVEYEEDELDLINRLVDIVRQF 965
Query: 1042 DPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
DPDIL G+++ S G+L ERA L ++ISR ++S+ G
Sbjct: 966 DPDILTGYEVHNNSWGYLIERARTKYEYNLCDEISR--MKSQSYGG-------------- 1009
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
K+A D WG TH S + V GR ++N+WR M E+ L YT+E V +
Sbjct: 1010 ---------FGKEA---DRWGFTHTSTIRVTGRHMINIWRAMHAELNLLQYTMENVVFHL 1057
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L ++IP LT W+ +G R + ++Y + R +LN +++ D++ RTSE AR+ G
Sbjct: 1058 LHKRIPHYQHLDLTTWYTNGKPRDLAKVLDYFITRVQLNFDLLEATDIVPRTSEQARLLG 1117
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
IDFF+V+SRGSQ++VES + R+A +N++ +SP QV Q A+ECLPLVMEP+S FY+
Sbjct: 1118 IDFFAVISRGSQFKVESTMFRIAKPENFILVSPSRKQVGRQNALECLPLVMEPQSAFYSS 1177
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE-NTLGVSSFRPDLHVLRDLKDELLIP 1339
PV+VLDFQSLYPS+MIAYN C+ TCLG+I+ ++ N +G F+ + +L +KD + I
Sbjct: 1178 PVIVLDFQSLYPSVMIAYNYCYSTCLGRIVSWRDRNKMGFMDFKREPQLLELVKDHINIA 1237
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIAN 1399
PNG+MYV P++RK +L +L EIL TR+MVK +K+ + L ++ N RQLALKL+AN
Sbjct: 1238 PNGMMYVKPEMRKSLLANMLGEILETRVMVKSGMKE-DKDDKTLQKLLNNRQLALKLLAN 1296
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
VTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ EKW A+V+YGDTD
Sbjct: 1297 VTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIAIIHATEKWGAEVVYGDTD 1350
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 95/206 (46%), Gaps = 56/206 (27%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSS--LQGG-KVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
F R+ ID+Y A P + S L G EVPVIR +G+T GQK C HIH AL
Sbjct: 48 FRFRLNCIDNYQAAPTDLDPVLRRSPGLSGRLGAPEVPVIRAFGATETGQKVCAHIHGAL 107
Query: 68 PYLYVPCADIPVQLRQEDDG---------YMHAISLALEKALKV---KGSAGSKRQHVHE 115
PYLY+ E DG Y+ + ++++AL + + K +V
Sbjct: 108 PYLYL-----------EYDGSLETDVVNSYILDLRTSIDQALATAYRRNTLDGKSTYVGH 156
Query: 116 CSLVRAK------------------------------KGGAVFDKSLQPHESHIPFLLQF 145
SLV+ GA+ ++ QP+ESH+ +LLQ+
Sbjct: 157 ISLVKGVPFYGYHVGYKTFLKVYLLNPMHMTRFADLLHQGAILNRVFQPYESHLQYLLQW 216
Query: 146 LVDYNLYGMGHLHLSKLKFRHPVPDA 171
+ DYNLYG ++ +K++FR PVPD+
Sbjct: 217 MCDYNLYGCDYIDCAKVQFRGPVPDS 242
>gi|395334320|gb|EJF66696.1| hypothetical protein DICSQDRAFT_176481 [Dichomitus squalens LYAD-421
SS1]
Length = 1668
Score = 415 bits (1067), Expect = e-112, Method: Compositional matrix adjust.
Identities = 255/670 (38%), Positives = 356/670 (53%), Gaps = 79/670 (11%)
Query: 822 TLYLNDGSCLYMLRPPFSPPSVDSVHKWLL--------HDDKGASGDMDKASVEHSSL-- 871
+LY + +Y RPP S V S ++ + H K D + E++ L
Sbjct: 658 SLYHGNNVYIYGCRPPTSAELVSSTDQYGIPSKIYRPPHYSK--ENDAPERPREYAGLVF 715
Query: 872 --KGSDIRPVLEEMHQ-EADEMISTEPTPDLN--GVTA----------------IMHNEG 910
KG D +LEE E +S EP L+ GV + +G
Sbjct: 716 HLKGGDGVGILEEWQSGEGVPSVSGEPARPLDPTGVGGWEYASAPPSVRQVRKWLKEQKG 775
Query: 911 HIAEPNACADCLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRG 970
+ A +A ++ SQI GP + S + + + + +T+L++EV A S+
Sbjct: 776 NTAARSAPT---KNSSQIEGPTQANPYGLQSTLAPRSDKAQRVRQNMTVLALEVFAPSKD 832
Query: 971 DLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKS-----ESHQRSLVGIPDCKVFVCS 1025
D PDP D + V +F++ AVE + C S S Q + + + K
Sbjct: 833 DHLPDPNDDEVAAVFYSFQSHDRDAVEPFT---CDSGIIVVNSDQLNPRRLRNVKAEFVD 889
Query: 1026 KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAA 1085
E+ L + I ++ DPD+L GW++Q S G+L+ R + G+ + ISR P + +
Sbjct: 890 SELDLLNRLIDVILDLDPDVLSGWEVQAASWGYLSARGRNYGLDVGEQISRAP--GRTSG 947
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
G D+WG S V GR VLN+WR+MR E
Sbjct: 948 GGY-----------------------------DQWGMKTTSTFKVIGRHVLNLWRIMRSE 978
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASG-PGRARYRCVEYVVGRAKLNLEIMN 1204
N+YT E V +LRR+ P R LT+W S PG R + Y R + LE+++
Sbjct: 979 QTFNIYTFENVVFQLLRRRTPWYSPRTLTEWHNSAVPGHTD-RVLRYFARRTSMVLEMLD 1037
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
+++ + +E ARVFG+DFFSVLSRGSQY+VES + R+A ++++ +SP V Q A
Sbjct: 1038 VAEVVTKNAEFARVFGVDFFSVLSRGSQYKVESFMFRIAKPESFVLLSPSKQDVGKQNAA 1097
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN-TLGVSSFR 1323
EC+PL+MEP S FY+ P+VVLDFQSLYPS+MIAYN C+ TCLG+I K GV+ R
Sbjct: 1098 ECMPLIMEPLSAFYSSPLVVLDFQSLYPSIMIAYNYCYSTCLGRITDFKGTYKFGVTDLR 1157
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L L++ + + PNG+MYV VRKG+L R+L E+L TR+MVKQA+K A + L
Sbjct: 1158 QPAGLLDTLQEHINVAPNGIMYVKESVRKGLLGRMLTELLETRVMVKQAMKG-AKDDKAL 1216
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
RI +ARQL LK IANVTYGYT+A FSGRMP E+ADSIVQ GR TLEKAI +N KW
Sbjct: 1217 RRILDARQLGLKFIANVTYGYTSATFSGRMPAVEIADSIVQSGRETLEKAIRIINSTTKW 1276
Query: 1444 KAKVIYGDTD 1453
AKV+YGDTD
Sbjct: 1277 GAKVVYGDTD 1286
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 41/185 (22%)
Query: 13 VRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
VRI ID+ M+ P P L + VPVIR+YG + G K CLH+H+ PY +V
Sbjct: 10 VRINQIDYAMSAPGP--------LDNSSLYRVPVIRIYGDSSIGLKACLHVHQVYPYFFV 61
Query: 73 PCADI--PVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRA--------- 121
P + + H+++ A+ ++K + K Q V LV+
Sbjct: 62 EYLGKMNPDVVNRYVTKLKHSLNHAIAISMK-RNPQSPKSQFVRAVVLVKGVHFYGFHAN 120
Query: 122 ---------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLS 160
+ G + + +ESH+ ++LQFL D+ LYG G + L
Sbjct: 121 YSPFLKVHIADPAYVNRAVTIMQSGTIMKTRFRVYESHLSYILQFLSDFGLYGCGWIDLG 180
Query: 161 KLKFR 165
++ R
Sbjct: 181 EVWQR 185
>gi|449497906|ref|XP_002191467.2| PREDICTED: DNA polymerase zeta catalytic subunit [Taeniopygia
guttata]
Length = 3147
Score = 414 bits (1065), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/560 (41%), Positives = 326/560 (58%), Gaps = 55/560 (9%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ S + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2279 KETSQIEGPSLNNTYGFKVSVENLQEAKSLHEVQHLTLISMELHARTRRDLEPDPEFDPI 2338
Query: 982 NVVALAFENDS-------DHAVEIYVLLYCKSESHQRSL--------VGIPDCKVFVCSK 1026
+ +DS V+ ++ S Q S G+ +V +
Sbjct: 2339 CALFYCISSDSALPNTDKKEITGAIVIDRGRTLSSQGSRDQAPLLTRSGVTGLEVSYATD 2398
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF + I+ +DPDIL+G+++Q S G+L +RA L + L ISR P +SK
Sbjct: 2399 ERTLFQEVVNIVKRYDPDILLGYEVQMHSWGYLLQRAEALNVDLCQMISRVPDKSK---- 2454
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
+N A + DE+G S +++ GRIVLN+WR+MR EV
Sbjct: 2455 ----------ENRFATEL-------------DEYGADTMSEINIVGRIVLNIWRMMRHEV 2491
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V VL + P FRVL+ WF + R++ V++ V R + NL ++ +L
Sbjct: 2492 TLTNYTFENVGFHVLHHRFPLFTFRVLSDWFDNKADVYRWKMVDHYVSRVRGNLLLLEKL 2551
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I+RTSE+AR+FGI F VL+RGSQYRVES++LR+A NY+A++P Q A A +C
Sbjct: 2552 DLIDRTSEMARLFGIQFLHVLTRGSQYRVESVMLRIAKPMNYIAVTPSVQQRAQMKAPQC 2611
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN-------TLGV 1319
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + EN G
Sbjct: 2612 VPLIMEPESRFYSNAVLVLDFQSLYPSIVIAYNYCFSTCLGHV----ENLGKYDAFKFGC 2667
Query: 1320 SSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPS 1379
+S R +L ++ ++ + P+GV +V P VRKGVLPR+LEEIL TRIMVKQ++K
Sbjct: 2668 TSLRVPPDLLYQIRHDITVSPSGVAFVKPSVRKGVLPRMLEEILKTRIMVKQSMKAYKHD 2727
Query: 1380 QQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE 1439
+ + R+ ARQL LK IAN T+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+
Sbjct: 2728 KAVT-RMLEARQLGLKYIANFTFGYTAANFSGRMPCTEIGDSIVHKARETLERAIKLVND 2786
Query: 1440 NEKWKAKVIYGDTDRYTVCI 1459
+KW A V+YGDTD V +
Sbjct: 2787 TKKWGAHVVYGDTDSMFVLL 2806
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 35/141 (24%)
Query: 56 GQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVH 114
QKTCLH+H PYLYVP Q + Y+ ++ ++++AL V G+ S QHV
Sbjct: 32 SQKTCLHLHGIFPYLYVPYDG----FGQHPECYLRQVAFSIDRALNVALGNPSSTVQHVF 87
Query: 115 ECSLVRAK------------------------------KGGAVFDKSLQPHESHIPFLLQ 144
+ SLV +GGA+ +KS QPHE+HIP+LLQ
Sbjct: 88 KVSLVSGMPFYGYHEKERQFMKIYLYNPAMVKRVCELLQGGAIMNKSYQPHEAHIPYLLQ 147
Query: 145 FLVDYNLYGMGHLHLSKLKFR 165
+DYNLYGM ++L+ +KFR
Sbjct: 148 LFIDYNLYGMNLINLAAVKFR 168
>gi|226294625|gb|EEH50045.1| DNA polymerase zeta catalytic subunit [Paracoccidioides brasiliensis
Pb18]
Length = 1628
Score = 414 bits (1065), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/547 (40%), Positives = 323/547 (59%), Gaps = 42/547 (7%)
Query: 925 ISQISGPDGRSKPT-PLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINV 983
+SQ+ GP + + SQ GA + ++++S+E+ SRG L P+P D I+
Sbjct: 763 LSQVEGPTQKDRHGFKYSQKKPARKVRQGA-QYMSVMSLEIHVNSRGTLVPNPEEDEISC 821
Query: 984 VALAFEND---------SDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHF 1034
+ ++ + + V+ ++ES + + + E+ L +
Sbjct: 822 IFWCVQDGDNDVDDEDDETSGLAVGVIALAENESLAAKISPTMVAEFDEETSELDLLTKL 881
Query: 1035 IKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLESKIAAGDSEISER 1093
+ ++ DPDIL G+++ S G+L ERA + L +++SR +S G
Sbjct: 882 VDVVRRCDPDILTGYEVHNSSWGYLIERARYKYDYDLCDELSRVKTDSHGRIGKEN---- 937
Query: 1094 GITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTV 1153
D WG H S + V GR ++N+WR MRGE+ L YT+
Sbjct: 938 ------------------------DRWGFNHTSSIRVTGRHMINLWRAMRGELNLLQYTI 973
Query: 1154 EAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTS 1213
E VA +L ++IP ++ LTKWF S R + + Y R +LNL+I++ ++I+RTS
Sbjct: 974 ENVAFHLLHQRIPHYHYQDLTKWFQSQRPRDIAKVINYFASRVQLNLKIIDSNELISRTS 1033
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E AR+ G+DFFSV SRGSQ++VES++ R+A +N + ISPG QV Q A+ECLPLVMEP
Sbjct: 1034 EQARILGVDFFSVFSRGSQFKVESLMFRIAKPENLILISPGRKQVGQQNALECLPLVMEP 1093
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDL 1332
+S FY PV+VLDFQSLYPS+MIAYN C+ TCLG+++ + +N LG FR +L
Sbjct: 1094 QSDFYTSPVLVLDFQSLYPSIMIAYNYCYSTCLGRVVEWRGQNKLGFIDFRRPAGLLELF 1153
Query: 1333 KDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
KD++ I PNG++YV ++RK +L ++L EIL TR+MVK +K + L R+ N RQL
Sbjct: 1154 KDQINISPNGMIYVKQEIRKSLLAKMLIEILETRVMVKGGMKAWKDDKS-LQRLLNNRQL 1212
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDT 1452
ALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ R TLEKAI+ ++ E+W A+V+YGDT
Sbjct: 1213 ALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETLEKAIAMIHSVERWNAEVVYGDT 1272
Query: 1453 DRYTVCI 1459
D VC+
Sbjct: 1273 DSVFVCL 1279
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 113 VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
+H L + GAV + LQP+ESH+ +L Q++ DYNLYG +L SK+ FR P+P
Sbjct: 80 MHMNRLADLLRQGAVMKRVLQPYESHLQYLAQWMCDYNLYGCAYLRSSKVMFRAPIP 136
>gi|325186586|emb|CCA21132.1| DNA polymerase zeta catalytic subunit putative [Albugo laibachii
Nc14]
Length = 1726
Score = 414 bits (1065), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/552 (40%), Positives = 335/552 (60%), Gaps = 66/552 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALA------------------FENDSDHAV-- 996
+T+LS+EV A SRG L PDP D++ ++ A D AV
Sbjct: 814 ITILSVEVFAFSRGSLSPDPAIDAVGAISYAVSAKEGLHRSKIKATGIIINTTEDKAVPG 873
Query: 997 -EIYVLL-----------YCKSESHQRSLVGIP------DCKVFVCSKEIHLFSHFIKIL 1038
+I + + + S +R L+G D F S E + + F +++
Sbjct: 874 SDIKLATGFRDNLRFDESFAQLISGKRKLIGKRFCLGPHDAAAFAFSNEEEVITCFNRVV 933
Query: 1039 CSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDN 1098
++DPD + G+++Q S+G+L +RA HL I L+ ISR P ++ I A +
Sbjct: 934 QTWDPDFITGFEVQKSSIGYLVDRAMHLNINLIQTISRLP-QTSIDARN----------- 981
Query: 1099 MLAEPVVAESLLAKD-----AIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTV 1153
P+ S+ KD A + WG ASGL + GR V+N+WR+ R E+KL Y++
Sbjct: 982 ----PISHVSVQEKDPEKNKASVGTVWGMAKASGLWIHGRHVINLWRVARSELKLARYSM 1037
Query: 1154 EAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTS 1213
E + + +L++ P+ + ++ + G G R++ + +++ RA +NL++M+++ I R+S
Sbjct: 1038 EDIVQALLKQTWPTYSYEQMSTSYREG-GIRRWKMLNHLLKRAIMNLKLMSRMQFITRSS 1096
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E+AR+FGIDF+SVLSRGSQ+RVE+++LR+ +N++ +SP +QVA+Q MEC+PLVMEP
Sbjct: 1097 EMARLFGIDFYSVLSRGSQFRVEAVMLRVTKRKNFVLLSPSRNQVAAQAPMECIPLVMEP 1156
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI----LPSKENTLGVSSFRPDLHVL 1329
+S +Y+DPVVVLDFQSLYPS++IAYNLC+ T G++ P E ++GV+SF PD
Sbjct: 1157 QSRYYSDPVVVLDFQSLYPSLVIAYNLCYSTYFGRLENGMSPKLETSMGVTSFSPDEKGF 1216
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK--LAPSQQILHRIF 1387
++ I PNG ++ P R+G L +LEEIL+TRIM+K A+KK + + L +
Sbjct: 1217 LTCDQDIHIAPNGTLFCPKSHRQGALSAILEEILATRIMIKHAMKKSNFSGHSKNLFKKL 1276
Query: 1388 NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKV 1447
+ARQLALKLIANVTYGYTAAGFSGRMPCA+LAD+IVQ GR TLE + V + +W A+V
Sbjct: 1277 DARQLALKLIANVTYGYTAAGFSGRMPCAQLADAIVQTGRCTLEGTVRVVESHAEWNARV 1336
Query: 1448 IYGDTDRYTVCI 1459
+YGDTD V +
Sbjct: 1337 VYGDTDSLFVLL 1348
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 35/198 (17%)
Query: 7 DSNIFSVRIVSIDHYMAPPIPGYDICY--SSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
D V ++ +D+Y+ P+P ++ S K + VPVIRV+GSTPAGQK +H+H
Sbjct: 10 DEEYIRVDVLHVDYYLDAPLPDNELANLPVSPYYQKAHRVPVIRVFGSTPAGQKALVHLH 69
Query: 65 RALPYLYVPCADIPV--QLRQ-----------------------EDDGYMHAISLALEKA 99
LPY Y+ C + P+ QL + ++ + S + K
Sbjct: 70 GVLPYFYLRCENDPIFEQLSELQKLLPELARDIEKCFHKKADNPSENSFKIKFSNVIAKG 129
Query: 100 LKVKGSAGSKRQHV--------HECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ G R V H LV + G + + Q ESH+P++LQ DY++
Sbjct: 130 IPFYGYHNQPRLFVQIFYYNPRHSNHLVEMLRSGEITKRVFQTFESHVPYMLQIFADYHI 189
Query: 152 YGMGHLHLSKLKFRHPVP 169
GM L LS +KFR P+P
Sbjct: 190 EGMNPLFLSNVKFRAPLP 207
>gi|325094502|gb|EGC47812.1| polymerase zeta subunit [Ajellomyces capsulatus H88]
Length = 1637
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/547 (41%), Positives = 324/547 (59%), Gaps = 55/547 (10%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP +++ GF+ A + ++++S+EV +RG L P+P
Sbjct: 752 LSQIEGPTQKNRH------GFKYSQKKPARNVRQEAQYMSVMSLEVHVNTRGTLVPNPEE 805
Query: 979 DSINVVALAFEN-------DSDHA-VEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHL 1030
D I+ V ++ D D A + ++ ++ES + + E+ L
Sbjct: 806 DEISCVFWCVQDGETEINDDGDSAGITAGIIALSENESLAARISPTMVSEFEEEHTELDL 865
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLES--KIAAGD 1087
+ + ++ DPDIL G+++ S G+L ERA + L +++SR S +I G+
Sbjct: 866 LTRLVDVVRQRDPDILTGYEVHNSSWGYLIERARYKYDYDLCDELSRVKTNSHGRIGKGN 925
Query: 1088 SEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVK 1147
D WG H S + + GR ++N+WR MRGE+
Sbjct: 926 ------------------------------DRWGFNHTSSIRITGRHMINIWRAMRGELN 955
Query: 1148 LNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLD 1207
L YT+E V +L ++IP PF+ LTKWF S R + + Y + R +L+L+I+ +
Sbjct: 956 LLQYTMENVVFHLLHQRIPHYPFQDLTKWFTSKRPRDIAKVINYFLSRVQLDLKIIESNE 1015
Query: 1208 MINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECL 1267
+I+RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N++ ISPG QV Q A+ECL
Sbjct: 1016 LISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENFILISPGKKQVGQQNALECL 1075
Query: 1268 PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDL 1326
PLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ TCLG+++ + +N LG FR
Sbjct: 1076 PLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRVVSWRGQNKLGFIDFRRPA 1135
Query: 1327 HVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRI 1386
+L LKD++ I PNG++Y +VRK +L ++L EIL TR+MVK +K + L R+
Sbjct: 1136 GLLELLKDQINIAPNGIIYAKQEVRKSLLAKMLIEILETRVMVKGGMKADKDDKH-LQRL 1194
Query: 1387 FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAK 1446
N RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ R TLEKAI ++ E+W A+
Sbjct: 1195 LNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETLEKAIVLIHSVERWGAE 1254
Query: 1447 VIYGDTD 1453
V+YGDTD
Sbjct: 1255 VVYGDTD 1261
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 123 KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
+ GAV + LQP+ESH+ +L Q++ DYNLYG +L SK+ FR P+P
Sbjct: 81 RQGAVMKRVLQPYESHLQYLSQWMCDYNLYGCAYLKSSKVTFRAPIP 127
>gi|297678910|ref|XP_002817299.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit
[Pongo abelii]
Length = 3081
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/553 (41%), Positives = 323/553 (58%), Gaps = 62/553 (11%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2232 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2291
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI ++ +
Sbjct: 2292 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEITYAAD 2351
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2352 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2403
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2404 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2444
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2445 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2504
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2505 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2564
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDL 1326
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + + TL V
Sbjct: 2565 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFTLQV------- 2617
Query: 1327 HVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRI 1386
+ ++ + PNG P VRKGVLPR+LEEIL TR MVKQ++K + L R+
Sbjct: 2618 ------RHDITVSPNG-----PSVRKGVLPRMLEEILKTRFMVKQSMKAYR-QDRALSRM 2665
Query: 1387 FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAK 1446
+ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW A+
Sbjct: 2666 LDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKWGAR 2725
Query: 1447 VIYGDTDRYTVCI 1459
V+YGDTD V +
Sbjct: 2726 VVYGDTDSMFVLL 2738
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 73/142 (51%), Gaps = 35/142 (24%)
Query: 55 AGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHV 113
+ QKTCLH+H PYLYVP Q+ + Y+ ++ ++++AL V G+ S QHV
Sbjct: 14 SSQKTCLHLHGIFPYLYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHV 69
Query: 114 HECSLVRAK------------------------------KGGAVFDKSLQPHESHIPFLL 143
+ SLV + GA+ +K QPHE+HIP+LL
Sbjct: 70 FKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLL 129
Query: 144 QFLVDYNLYGMGHLHLSKLKFR 165
Q +DYNLYGM ++L+ +KFR
Sbjct: 130 QLFIDYNLYGMNLINLAAVKFR 151
>gi|328862001|gb|EGG11103.1| hypothetical protein MELLADRAFT_33498 [Melampsora larici-populina
98AG31]
Length = 1618
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/551 (39%), Positives = 335/551 (60%), Gaps = 51/551 (9%)
Query: 925 ISQISGPDGRS---KPTPLSQ-IGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDS 980
ISQI GP ++ K TP+ + + +DP S +Q+ +L++EV A++R DLRPDP D
Sbjct: 692 ISQIEGPTQKNEGYKYTPIKKKLENEDPES----QQMDVLAVEVHAKNRADLRPDPAQDP 747
Query: 981 INVVALAFENDSDHAVE--------IYV-LLYCKSESH--QRSLVGIPDCKVFVCSKEIH 1029
I VV + S VE YV ++ K +H Q+ + DC + V EI
Sbjct: 748 IEVVFYCLQ--SSRRVERGNGRRPGTYVGMIVVKGGNHGGQKVKYALNDCLIEVVDTEIE 805
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSE 1089
L + I + +DP++L G++++ S G++ R L ++++ R ES
Sbjct: 806 LMNLLIDKVRDWDPEVLTGFELESWSWGYVMGRGRELDFDVVHEFGRVKHESH------- 858
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
+ A +D+WG TH S + V GR VL++WR++R E+ +
Sbjct: 859 ---------------------GRFAGKDDKWGYTHGSSIRVSGRHVLSIWRIIRSELAVT 897
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
YT E + +LR+++P F L KW+ SG + R + Y + R +L++ +M++ ++I
Sbjct: 898 QYTFENLVFHILRKRLPHYSFATLGKWWRSGSIERQRRVLLYYMDRVELDIHLMDETEII 957
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
+R +E++RV G+DFFS +SRGSQ++VES+L R+A +NYL SP +V Q A EC+PL
Sbjct: 958 SRNAEISRVLGVDFFSAISRGSQFKVESVLFRIAKPENYLLPSPSREEVGQQNAAECIPL 1017
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT-LGVSSFRPDLHV 1328
+MEP+S FY P++VLDFQSLYPS+MIAYN C+ TCLG++ K + G S+ +
Sbjct: 1018 IMEPQSAFYKSPLIVLDFQSLYPSIMIAYNYCYSTCLGRVGTFKGTSKFGTSALDLPDGL 1077
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L LKD L++ PNG+M+V P+VRK +L ++L E L TR+M+K+++K + + + ++ N
Sbjct: 1078 LSLLKDHLIVSPNGLMFVKPQVRKSLLSKMLSEFLDTRVMIKESMKAVKDDKGMC-KMMN 1136
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
ARQL LK IANVTYGYT+A FSGRMPC E+AD+IVQ GR TLEK++ F++ ++W AKV+
Sbjct: 1137 ARQLGLKFIANVTYGYTSASFSGRMPCVEIADAIVQTGRETLEKSMEFIHSVKEWDAKVV 1196
Query: 1449 YGDTDRYTVCI 1459
YGDTD V +
Sbjct: 1197 YGDTDSLFVYL 1207
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 57/189 (30%)
Query: 38 GGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQ-------LRQEDDGYMH 90
G ++N+VPVIR++G+TPAGQ+ H+H A+ Y YV D P+ +R+ +
Sbjct: 45 GRQLNKVPVIRIFGATPAGQRVLAHVHGAMSYFYVQY-DGPIDPDTVHRFIRRLGHALNY 103
Query: 91 AISLALEKALKVKGSAGSKRQHVHECSL-----------------------VRAKK---- 123
A + +L + K + S+ Q+V +L R KK
Sbjct: 104 ATAASLGQVNSNKSADRSRHQYVAYIALCKGVPFYGFHVGYRYFLKIYCLQARFKKRMAD 163
Query: 124 ---GGAVFDKS-------------------LQPHESHIPFLLQFLVDYNLYGMGHLHLSK 161
G V D S + E HIPF LQF++D+NLYG G + LS+
Sbjct: 164 LLRSGKVIDPSSHSPYQTSNNQRGSSARAGFKVFEEHIPFHLQFMLDHNLYGCGMIELSE 223
Query: 162 LKFRHPVPD 170
FR P+PD
Sbjct: 224 CSFRLPLPD 232
>gi|159127940|gb|EDP53055.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus
fumigatus A1163]
Length = 1656
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/550 (41%), Positives = 319/550 (58%), Gaps = 51/550 (9%)
Query: 926 SQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRYD 979
SQI GP T + GF Q S Q ++ +S+EV +RG L P+P D
Sbjct: 782 SQIEGP------TQKNDYGFKYSQKGKSTSVEHQTQYMSSMSLEVHVNTRGVLLPNPEED 835
Query: 980 SINVVALAFENDSDH--------AVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLF 1031
I+ + ++D V + ++ + L ++ E+ L
Sbjct: 836 EISCIFWCIQSDDQDVDVNGNLPGVHVGMIAQGSGDGPTSKLSKALRIELEHEPTELDLI 895
Query: 1032 SHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEI 1090
+ + I+ DPDI+ G+++ GS G+L ERA + +++SR +
Sbjct: 896 NRLVDIVRYHDPDIITGYEVHNGSWGYLIERARKKYDFDICDELSRVRSQ---------- 945
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
A KDA D WG H S + V GR ++N+WR MR E+ L
Sbjct: 946 ---------------AHGRFDKDA---DRWGFNHTSSIRVTGRHMINIWRAMRSELNLLQ 987
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
YT+E V +L R+IP +R LT W+ SG R + V+Y V R ++NLEI+ ++I
Sbjct: 988 YTIENVVFHLLHRRIPHYSYRDLTAWYQSGKPRDVLKVVQYYVSRIQMNLEILESNELIP 1047
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +NYL +SP QV Q A+ECLPLV
Sbjct: 1048 RTSEQARLLGIDFFSVFSRGSQFKVESLMFRIAKPENYLLVSPSRKQVGQQNALECLPLV 1107
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-LPSKENTLGVSSFRPDLHVL 1329
MEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG++ L N +G ++ VL
Sbjct: 1108 MEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRVRLWRGRNKMGFMDYKRQPRVL 1167
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
LKD++ I PNG+MYV P+VR+ +L R+L EIL TR+MVK + K+ + L R+ N
Sbjct: 1168 ELLKDKVNIAPNGMMYVKPEVRQSLLARMLAEILETRVMVKAGM-KMDKDDKALQRLLNN 1226
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIY 1449
RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ E+W A+V+Y
Sbjct: 1227 RQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIALIHSVERWGAEVVY 1286
Query: 1450 GDTDRYTVCI 1459
GDTD V +
Sbjct: 1287 GDTDSLFVYL 1296
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 36/48 (75%)
Query: 125 GAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDAF 172
GAV + +QP+ESH+ ++ Q++ DYNLYG ++ SK+KFR P+P+ +
Sbjct: 110 GAVLKRPMQPYESHLQYVPQWMCDYNLYGCAYIKCSKVKFRSPIPEYY 157
>gi|119192044|ref|XP_001246628.1| hypothetical protein CIMG_00399 [Coccidioides immitis RS]
Length = 1525
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/507 (42%), Positives = 308/507 (60%), Gaps = 39/507 (7%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFE--------NDSDHAVEIYVLLYCKSES 1008
++++S+EV +R L P+P D I+ + + N+ V+ VL ++ES
Sbjct: 683 MSVMSLEVHVNTRCTLAPNPEEDEISCIFWCIQSGNRSLGVNEPSDEVQTGVLAVAETES 742
Query: 1009 HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLG 1067
+ + ++ S E+ + + + I+ +DPDIL G+++ GS G+L ERA
Sbjct: 743 IAGKIRYDTNAEIEEESSELDVLTKLVDIVRYYDPDILTGYEVHNGSWGYLIERARVKYD 802
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
L +++SR +S G D WG H S
Sbjct: 803 YDLCDELSRVKTDSHGRFGKES----------------------------DRWGFNHTST 834
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ V GR ++N+WR MR E+ L YT+E VA +L ++IP PF LTKWF S R +
Sbjct: 835 IRVTGRHMINIWRAMRSELSLIQYTLENVAFHLLHKRIPHYPFHDLTKWFKSTKPRNLVK 894
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
V Y + R +LNL+I++ ++I+RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N
Sbjct: 895 VVNYFITRTRLNLDILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPEN 954
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
++ ISP QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG
Sbjct: 955 FILISPSKAQVGQQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLG 1014
Query: 1308 KILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTR 1366
+I+ + N +G ++ +L L+ ++ I PNG+MY P+VRK +L ++L EIL TR
Sbjct: 1015 RIVDWRGRNKMGFIDYQRQQGLLGLLESQINIAPNGIMYTRPEVRKSLLAKMLSEILETR 1074
Query: 1367 IMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
+MVK +K + L R+ N RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ
Sbjct: 1075 VMVKGGMKA-NKEDRALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTA 1133
Query: 1427 RSTLEKAISFVNENEKWKAKVIYGDTD 1453
R TLEKAI+ ++ E+W A+V+YGDTD
Sbjct: 1134 RETLEKAIAMIHSVERWGAEVVYGDTD 1160
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 130 KSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
+ LQP+ESH+ ++ Q++ DYNLYG ++ K+ FR PVP
Sbjct: 3 RVLQPYESHMQYIPQWMCDYNLYGCAYIDCRKVTFRGPVP 42
>gi|395816788|ref|XP_003781872.1| PREDICTED: DNA polymerase zeta catalytic subunit [Otolemur garnettii]
Length = 3076
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/448 (47%), Positives = 285/448 (63%), Gaps = 31/448 (6%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
GI +V + E LF I+ +DPDIL+G++IQ S G+L +RAA L + L I
Sbjct: 2323 GITGLEVTYAADEKALFQEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVNLCQMI 2382
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
SR P D +I R AE DE+G S +++ GRI
Sbjct: 2383 SRVP--------DDKIENR----------FAAE---------RDEYGSDTMSEINIVGRI 2415
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
LN+WR+MR EV L YT E V+ VL ++ P FRVL+ WF + R++ V++ V
Sbjct: 2416 TLNLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVS 2475
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
R + NL+++ QLD+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P
Sbjct: 2476 RVRGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPS 2535
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---P 1311
Q + A +C+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG +
Sbjct: 2536 IQQRSRMRAPQCIPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGK 2595
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
E G +S R +L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR+MVKQ
Sbjct: 2596 YDEFKFGCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQ 2655
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
++K ++L R+ +ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE
Sbjct: 2656 SMKAYK-QDRVLSRMLDARQLGLKLIANVTFGYTSAHFSGRMPCVEVGDSIVHKARETLE 2714
Query: 1432 KAISFVNENEKWKAKVIYGDTDRYTVCI 1459
+AI VN+ +KW AKV+YGDTD V +
Sbjct: 2715 RAIKLVNDTKKWGAKVVYGDTDSMFVLL 2742
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 106/187 (56%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+ SVRIV+ D+YMA P+ G DIC S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MISVRIVTADYYMASPLQGLDICQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDGYGHQ----PESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|71000489|ref|XP_754928.1| DNA polymerase zeta catalytic subunit [Aspergillus fumigatus Af293]
gi|66852565|gb|EAL92890.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus
fumigatus Af293]
Length = 1656
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/550 (41%), Positives = 319/550 (58%), Gaps = 51/550 (9%)
Query: 926 SQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRYD 979
SQI GP T + GF Q S Q ++ +S+EV +RG L P+P D
Sbjct: 782 SQIEGP------TQKNDYGFKYSQKGKSTSVEHQTQYMSSMSLEVHVNTRGVLLPNPEED 835
Query: 980 SINVVALAFENDSDH--------AVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLF 1031
I+ + ++D V + ++ + L ++ E+ L
Sbjct: 836 EISCIFWCIQSDDQDVDVNGNLPGVHVGMIAQGSGDGPTSKLSKALRIELEHEPTELDLI 895
Query: 1032 SHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEI 1090
+ + I+ DPDI+ G+++ GS G+L ERA + +++SR +
Sbjct: 896 NRLVDIVRYHDPDIITGYEVHNGSWGYLIERARKKYDFDICDELSRVRSQ---------- 945
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
A KDA D WG H S + V GR ++N+WR MR E+ L
Sbjct: 946 ---------------AHGRFDKDA---DRWGFNHTSSIRVTGRHMINIWRAMRSELNLLQ 987
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
YT+E V +L R+IP +R LT W+ SG R + V+Y V R ++NLEI+ ++I
Sbjct: 988 YTMENVVFHLLHRRIPHYSYRDLTAWYQSGKPRDVLKVVQYYVSRIQMNLEILESNELIP 1047
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +NYL +SP QV Q A+ECLPLV
Sbjct: 1048 RTSEQARLLGIDFFSVFSRGSQFKVESLMFRIAKPENYLLVSPSRKQVGQQNALECLPLV 1107
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-LPSKENTLGVSSFRPDLHVL 1329
MEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG++ L N +G ++ VL
Sbjct: 1108 MEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRVHLWRGRNKMGFMDYKRQPRVL 1167
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
LKD++ I PNG+MYV P+VR+ +L R+L EIL TR+MVK + K+ + L R+ N
Sbjct: 1168 ELLKDKVNIAPNGMMYVKPEVRQSLLARMLAEILETRVMVKAGM-KMDKDDKALQRLLNN 1226
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIY 1449
RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ E+W A+V+Y
Sbjct: 1227 RQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIALIHSVERWGAEVVY 1286
Query: 1450 GDTDRYTVCI 1459
GDTD V +
Sbjct: 1287 GDTDSLFVYL 1296
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 36/48 (75%)
Query: 125 GAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDAF 172
GAV + +QP+ESH+ ++ Q++ DYNLYG ++ SK+KFR P+P+ +
Sbjct: 110 GAVLKRPMQPYESHLQYVPQWMCDYNLYGCAYMKCSKVKFRSPIPEYY 157
>gi|408392217|gb|EKJ71575.1| hypothetical protein FPSE_08214 [Fusarium pseudograminearum CS3096]
Length = 1696
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/550 (40%), Positives = 322/550 (58%), Gaps = 51/550 (9%)
Query: 926 SQISGPDGRSKPTPLSQIGFQDPASAGAG------EQLTLLSIEVQAESRGDLRPDPRYD 979
SQI GP TP ++ GF+ A + ++ +S+EV +RG+ P+P D
Sbjct: 827 SQIEGP------TPKNRHGFKYTPGKKATSVKHEVQYMSTMSLEVHVNTRGNFVPNPEED 880
Query: 980 SINVVALAFEND--------SDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLF 1031
+ A ++D S V+ +LL R + + + E+ L
Sbjct: 881 EVQCAFWAIKSDGTSTDSQNSAGTVQTGILLLSNDAEFTRRVQRQTSANIIEETTELDLM 940
Query: 1032 SHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEI 1090
++I+ + DPDIL G+++ G S G+L ERA L ++ SR ES G
Sbjct: 941 VRMVEIVRNHDPDILTGYEVHGSSWGYLIERARLKYDYNLCDEFSRMKTESHGRFG---- 996
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
DN D WG S + V GR ++NVWR MRGE+ L
Sbjct: 997 -----KDN-------------------DRWGFNTTSTIRVTGRHMVNVWRAMRGELNLLQ 1032
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
YT+E VA +L ++IP ++ LT W+ SG R R + Y RAKL++EI++ ++I
Sbjct: 1033 YTMENVAWHLLHKRIPHYSWKSLTSWYKSGKHRELNRMLRYYQNRAKLDIEILDANELIA 1092
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L +SP QV Q A+ECLPLV
Sbjct: 1093 RTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPSRKQVGGQNALECLPLV 1152
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT-LGVSSFRPDLHVL 1329
MEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG++ + + +G + ++ +L
Sbjct: 1153 MEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRVTNWRGTSKMGFTEYKRQQGLL 1212
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
LKD + I PNG+MY ++RK +L ++L EIL TR+MVK +K+ + L ++ N
Sbjct: 1213 TLLKDYINIAPNGMMYAKTEIRKSLLAKMLTEILETRVMVKSGMKQ-DKDDKTLQQLLNN 1271
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIY 1449
RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI++++ EKW A+V+Y
Sbjct: 1272 RQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAYIHSVEKWGAEVVY 1331
Query: 1450 GDTDRYTVCI 1459
GDTD + +
Sbjct: 1332 GDTDSLFISL 1341
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 92/201 (45%), Gaps = 44/201 (21%)
Query: 9 NIFSVRIVSIDHYMAP-----PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
++F +R+ IDHY A P DI S + G +VP++R++G+T GQK C HI
Sbjct: 2 DLFRIRLNCIDHYQATATQYDPQLRNDIRPSQISKGP--KVPIVRIFGATETGQKVCAHI 59
Query: 64 HRALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKVKGSAGSKRQHVHECSLVRAK 122
H A PYLYV + L ++ G Y++ L+++ AL V K + + +
Sbjct: 60 HGAFPYLYV---EYEGGLSPDEVGAYIYRFHLSIDHALAVSYRRDQKNDNARFVARITLV 116
Query: 123 KG---------------------------------GAVFDKSLQPHESHIPFLLQFLVDY 149
KG G + QP+E+H+ FLLQF+ D+
Sbjct: 117 KGIPFFGFHVGYRFFLKIYMFNPVVMTRLADLLQQGVIMKHKFQPYEAHLQFLLQFMTDF 176
Query: 150 NLYGMGHLHLSKLKFRHPVPD 170
NLYG +L S FR PVP+
Sbjct: 177 NLYGCDYLESSSTGFRSPVPE 197
>gi|295663052|ref|XP_002792079.1| polymerase zeta subunit [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279254|gb|EEH34820.1| polymerase zeta subunit [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1675
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/552 (40%), Positives = 323/552 (58%), Gaps = 52/552 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQ----DPASA--GAGEQLTLLSIEVQAESRGDLRPDPRY 978
+SQ+ GP + + GF+ PA + ++++S+E+ SRG L P+P
Sbjct: 813 LSQVEGPTQKDRH------GFKYFQKKPARKVRQGAQYMSVMSLEIHVNSRGTLVPNPEE 866
Query: 979 DSINVVALAFEND---------SDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIH 1029
D I+ + ++ + + V+ ++ES + + + E+
Sbjct: 867 DEISCIFWCVQDGDNDADDEDDETSGLAVGVIALAENESLAAKISPTMVAEFDEETSELD 926
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLESKIAAGDS 1088
L + + ++ DPDIL G+++ S G+L ERA + L +++SR +S G
Sbjct: 927 LLTKLVDVVRRCDPDILTGYEVHNSSWGYLIERARYKYDYDLCDELSRVKTDSHGRIGKE 986
Query: 1089 EISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKL 1148
D WG H S + V GR ++N+WR MRGE+ L
Sbjct: 987 N----------------------------DRWGFNHTSSIRVTGRHMINLWRAMRGELNL 1018
Query: 1149 NMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDM 1208
YT+E VA +L ++IP ++ LTKWF S R + + Y R +LNL+I++ ++
Sbjct: 1019 LQYTMENVAFHLLHQRIPHYHYQDLTKWFQSQRPRDIAKVINYFASRVQLNLKIIDSNEL 1078
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
I+RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N + ISPG QV Q A+ECLP
Sbjct: 1079 ISRTSEQARILGVDFFSVFSRGSQFKVESLMFRIAKPENLILISPGRKQVGQQNALECLP 1138
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLH 1327
LVMEP+S FY PV+VLDFQSLYPS+MIAYN C+ TCLG+++ + +N LG FR
Sbjct: 1139 LVMEPQSDFYTSPVLVLDFQSLYPSIMIAYNYCYSTCLGRVVEWRGQNKLGFIDFRRPAG 1198
Query: 1328 VLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIF 1387
+L KD++ I PNG++YV +RK +L ++L EIL TR+MVK +K + L R+
Sbjct: 1199 LLELFKDQINISPNGMIYVKQDIRKSLLAKMLIEILETRVMVKGGMKAWKADKH-LQRLL 1257
Query: 1388 NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKV 1447
N RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ R TLEKAI+ ++ E+W A+V
Sbjct: 1258 NNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETLEKAIAMIHSVERWNAEV 1317
Query: 1448 IYGDTDRYTVCI 1459
+YGDTD VC+
Sbjct: 1318 VYGDTDSVFVCL 1329
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 86/193 (44%), Gaps = 34/193 (17%)
Query: 11 FSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
F V + IDHY + P P + + +VPVIRV+G+T GQK C HIH A
Sbjct: 4 FQVLLNCIDHYQSIPTALDPELPLSDGTAPKDARPKVPVIRVFGATETGQKVCAHIHGAF 63
Query: 68 PYLYVP-------------------CADIPVQLRQEDDGYMHAIS----LALEKALKVKG 104
PYLY+ D + + + Y IS + L K + G
Sbjct: 64 PYLYIEYQGSLNPKEVNTAIRTLHMSVDHALAVSYRRNAYERKISYVAHITLVKGVPFYG 123
Query: 105 SAGSKR--------QHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGH 156
R +H L + GAV + LQP+ESH+ +L Q++ DYNLYG +
Sbjct: 124 YHVGYRFFLKIYLFNPMHMNRLADLLRQGAVMKRVLQPYESHLQYLAQWMCDYNLYGCAY 183
Query: 157 LHLSKLKFRHPVP 169
L SK+ FR P+P
Sbjct: 184 LKSSKVMFRAPIP 196
>gi|171676135|ref|XP_001903021.1| hypothetical protein [Podospora anserina S mat+]
gi|170936133|emb|CAP60793.1| unnamed protein product [Podospora anserina S mat+]
Length = 1751
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/555 (40%), Positives = 328/555 (59%), Gaps = 66/555 (11%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRY 978
+SQI G TP ++ GF+ A + + ++ +S+E+ +RG L P+P
Sbjct: 843 MSQIIGA------TPKNKHGFRYSQKAKSTSVQHEAQYMSTMSLEIHVNTRGKLVPNPEE 896
Query: 979 DSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI------------------PDCK 1020
D I + +D +L+ S++ +L GI
Sbjct: 897 DEIQCLFWCMRSDEQ-------VLFGGSQAENGTLSGIIVLSEDGLLAEQIRKQMPSKVD 949
Query: 1021 VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPL 1079
V E+ L + ++I+ DPDIL G+++ GGS G++ ERA G L N+ SR
Sbjct: 950 VVAEESELELMNKIVEIVRMHDPDILTGYEVHGGSWGYVVERAGRQYGYDLCNEFSRMKS 1009
Query: 1080 ESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVW 1139
S P +S ++A D WG S +HV GR V+NVW
Sbjct: 1010 SS---------------------PSFGKS--GREA---DRWGFNTTSTIHVTGRHVINVW 1043
Query: 1140 RLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLN 1199
R MRGE+ L YT+E V +L R++P ++ LT+W+ SG R + + Y + R ++N
Sbjct: 1044 RAMRGELNLLQYTMENVVWHLLHRRMPHFSWKDLTEWYKSGRPRDLAKVLRYHLKRTRMN 1103
Query: 1200 LEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVA 1259
+EI+ ++I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L +SP QV
Sbjct: 1104 IEILEANELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPSRKQVG 1163
Query: 1260 SQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLG 1318
+Q A+ECLPLVMEP S FY PV+VLDFQSLYPS+MIAYN C+ TCLG+I+ + N +G
Sbjct: 1164 AQNALECLPLVMEPLSSFYTSPVLVLDFQSLYPSVMIAYNYCYSTCLGRIVNWRGTNKMG 1223
Query: 1319 VSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP 1378
+ ++ +L+ L+ + I PNG+MY P +RK +L ++L EIL TR+MVK +K+
Sbjct: 1224 FTEYKRREGLLKLLEPHINIAPNGLMYTKPTIRKSLLAKMLTEILETRVMVKSGMKQ-DK 1282
Query: 1379 SQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN 1438
+ L ++ N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI++++
Sbjct: 1283 DDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAYIH 1342
Query: 1439 ENEKWKAKVIYGDTD 1453
++WKA+V+YGDTD
Sbjct: 1343 SVDRWKAEVVYGDTD 1357
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 FSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
F VR+ IDHY A P P Y + Q K ++PV+RV+GST GQK C HIH A
Sbjct: 4 FRVRLNCIDHYQATPTRYDPQLRKDYRASQAAKEPKLPVVRVFGSTETGQKVCAHIHGAF 63
Query: 68 PYLYV 72
PYLYV
Sbjct: 64 PYLYV 68
Score = 60.1 bits (144), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 125 GAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDAFFP 174
G++ ++ QP+E+H+ FLLQF+ DYNLYG ++ + ++FR P+P P
Sbjct: 171 GSIMNRKFQPYEAHLQFLLQFMTDYNLYGCDYIEVGNVRFRSPIPGPAGP 220
>gi|396467820|ref|XP_003838034.1| similar to DNA polymerase zeta catalytic subunit [Leptosphaeria
maculans JN3]
gi|312214599|emb|CBX94590.1| similar to DNA polymerase zeta catalytic subunit [Leptosphaeria
maculans JN3]
Length = 1679
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/583 (39%), Positives = 335/583 (57%), Gaps = 52/583 (8%)
Query: 885 QEADEMISTEPTPDLNGVTAIMHNEGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIG 944
QE + I E T + +P ++++SQI GP R+K
Sbjct: 733 QEVEVWIREEAKQREAARTKSRNRNMRTPKPPRKIKIVENVSQIEGPTQRNKHGFKFSQK 792
Query: 945 FQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI-YVLLY 1003
Q + + ++++S+EV SRG L PDP D I + + + + + + +
Sbjct: 793 KQSTSVKHETQYMSIMSLEVHVNSRGSLVPDPTEDEIQCIFWSVQGEENATTDRPRAGIL 852
Query: 1004 CKSESHQRSLVGIPDCKVFVCSKEIHLF-----------SHFIKILCSFDPDILMGWDIQ 1052
C SE + GI V +K++ + + + I+ FDPDIL G+++
Sbjct: 853 CLSEDN-----GI----VNRIAKQVRMEVEYEEEELELVNRIVDIVRQFDPDILTGYEVH 903
Query: 1053 GGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLA 1111
GS G+L ERA L ++ISR +S G
Sbjct: 904 NGSWGYLIERARMKYEYDLCDEISRMKSQSHGRFG------------------------- 938
Query: 1112 KDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR 1171
K+A D WG TH S + V GR ++N+WR MRGE+ L YT+E V +L ++IP
Sbjct: 939 KEA---DRWGFTHTSTIRVTGRHMINIWRAMRGELNLLQYTMENVVFHLLHKRIPHYQHS 995
Query: 1172 VLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGS 1231
LT W+ S R + +++ + R +LNL+I+ +++ RTSE AR+ G+DFFSV+SRGS
Sbjct: 996 ELTAWYRSDRPRDLAKVLDHFISRVQLNLDILEANEIVPRTSEQARLLGVDFFSVISRGS 1055
Query: 1232 QYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLY 1291
QY+VES + R+A +N++ +SP QV Q A+ECLPLVMEP+S FY P++VLDFQSLY
Sbjct: 1056 QYKVESTMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSAFYTSPLLVLDFQSLY 1115
Query: 1292 PSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKV 1350
PS+MIAYN C+ TCLG+I + N +G F+ + +L ++D + I PNG+MYV P++
Sbjct: 1116 PSVMIAYNFCYSTCLGRITSWRGRNKMGFMDFKREPQLLELVQDHINIAPNGMMYVKPEM 1175
Query: 1351 RKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFS 1410
RK +L ++L E+L TR+MVK +K+ + L ++ N RQLALKL+ANVTYGYT+A FS
Sbjct: 1176 RKSLLAKMLGELLETRVMVKSGMKQ-DKDDKALQQLLNNRQLALKLLANVTYGYTSASFS 1234
Query: 1411 GRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
GRMPC+E+ADSIVQ GR TLEKAI+ ++ EKW A+V+YGDTD
Sbjct: 1235 GRMPCSEIADSIVQTGRETLEKAIALIHTTEKWGAEVVYGDTD 1277
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 40/200 (20%)
Query: 9 NIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVN----EVPVIRVYGSTPAGQKTCLHIH 64
+ F R+ IDHY A P D + G +VPVIR +G+T GQK C HIH
Sbjct: 2 DTFRFRLNCIDHYQATPT-DLDPPLRRITGPNSRLSAPQVPVIRAFGATETGQKVCAHIH 60
Query: 65 RALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA 121
ALPYL++ + + E Y+ A+ +++ AL + + K +V SL++
Sbjct: 61 GALPYLFLEYSGSLEEHVVE--AYIAALRASIDHALAATYRRNAFDGKSVYVGYISLIKG 118
Query: 122 K------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
GA+ ++ QP+E+H+ +LLQ++ DYNL
Sbjct: 119 VPFFGYNVGYKVFLKIYILNPMHMTRFADLLHQGAILNRVFQPYEAHLQYLLQWMCDYNL 178
Query: 152 YGMGHLHLSKLKFRHPVPDA 171
YG +++ +K++FR PVPD+
Sbjct: 179 YGCDYINCAKVQFRGPVPDS 198
>gi|392864138|gb|EAS35055.2| polymerase zeta subunit [Coccidioides immitis RS]
Length = 1679
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/507 (42%), Positives = 308/507 (60%), Gaps = 39/507 (7%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFE--------NDSDHAVEIYVLLYCKSES 1008
++++S+EV +R L P+P D I+ + + N+ V+ VL ++ES
Sbjct: 837 MSVMSLEVHVNTRCTLAPNPEEDEISCIFWCIQSGNRSLGVNEPSDEVQTGVLAVAETES 896
Query: 1009 HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLG 1067
+ + ++ S E+ + + + I+ +DPDIL G+++ GS G+L ERA
Sbjct: 897 IAGKIRYDTNAEIEEESSELDVLTKLVDIVRYYDPDILTGYEVHNGSWGYLIERARVKYD 956
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
L +++SR +S G D WG H S
Sbjct: 957 YDLCDELSRVKTDSHGRFGKES----------------------------DRWGFNHTST 988
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ V GR ++N+WR MR E+ L YT+E VA +L ++IP PF LTKWF S R +
Sbjct: 989 IRVTGRHMINIWRAMRSELSLIQYTLENVAFHLLHKRIPHYPFHDLTKWFKSTKPRNLVK 1048
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
V Y + R +LNL+I++ ++I+RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N
Sbjct: 1049 VVNYFITRTRLNLDILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPEN 1108
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
++ ISP QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG
Sbjct: 1109 FILISPSKAQVGQQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLG 1168
Query: 1308 KILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTR 1366
+I+ + N +G ++ +L L+ ++ I PNG+MY P+VRK +L ++L EIL TR
Sbjct: 1169 RIVDWRGRNKMGFIDYQRQQGLLGLLESQINIAPNGIMYTRPEVRKSLLAKMLSEILETR 1228
Query: 1367 IMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
+MVK +K + L R+ N RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ
Sbjct: 1229 VMVKGGMKA-NKEDRALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTA 1287
Query: 1427 RSTLEKAISFVNENEKWKAKVIYGDTD 1453
R TLEKAI+ ++ E+W A+V+YGDTD
Sbjct: 1288 RETLEKAIAMIHSVERWGAEVVYGDTD 1314
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 11 FSVRIVSIDHYMAPP------IPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F V + +DHY A P +P D S+ KV PVIRV+G+T GQK C HIH
Sbjct: 4 FRVLLNCVDHYQAAPTYLDPQLPCGDGPTSARTRPKV---PVIRVFGATETGQKVCAHIH 60
Query: 65 RALPYLYV------PCADIPVQLRQEDDGYMHAISLALEKALKVKGSA------------ 106
A PYLY+ + R HA++++ + G+A
Sbjct: 61 GAFPYLYIEYRGSLAVEQVKAATRSLHVSIDHALAVSYRRNAYDPGTAYVAHISLVKGTP 120
Query: 107 --GSKRQH-----------VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYG 153
G H +H L GAV + LQP+ESH+ ++ Q++ DYNLYG
Sbjct: 121 FYGYHVGHKFFFKIYLLNPLHMTRLADLLLQGAVMKRVLQPYESHMQYIPQWMCDYNLYG 180
Query: 154 MGHLHLSKLKFRHPVP 169
++ K+ FR PVP
Sbjct: 181 CAYIDCRKVTFRGPVP 196
>gi|303313149|ref|XP_003066586.1| DNA polymerase zeta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240106248|gb|EER24441.1| DNA polymerase zeta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1679
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/507 (42%), Positives = 308/507 (60%), Gaps = 39/507 (7%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFE--------NDSDHAVEIYVLLYCKSES 1008
++++S+EV +R L P+P D I+ + + N+ V+ VL ++ES
Sbjct: 837 MSVMSLEVHVNTRCTLAPNPEEDEISCIFWCIQSGDRSLGVNEPSDEVQTGVLAVAETES 896
Query: 1009 HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLG 1067
+ + ++ S E+ + + + I+ +DPDIL G+++ GS G+L ERA
Sbjct: 897 IAAKIRYDTNAEIEEESSELDVLTKLVDIVRYYDPDILTGYEVHNGSWGYLIERARVKYD 956
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
L +++SR +S G D WG H S
Sbjct: 957 YDLCDELSRVKTDSHGRFGKES----------------------------DRWGFNHTST 988
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ V GR ++N+WR MR E+ L YT+E VA +L ++IP PF LTKWF S R +
Sbjct: 989 IRVTGRHMINIWRAMRSELNLIQYTLENVAFHLLHKRIPHYPFHDLTKWFKSTKPRNLVK 1048
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
V Y + R +LNL+I++ ++I+RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N
Sbjct: 1049 VVNYFITRTRLNLDILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPEN 1108
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
++ ISP QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG
Sbjct: 1109 FILISPSKAQVGQQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLG 1168
Query: 1308 KILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTR 1366
+I+ + N +G ++ +L L+ ++ I PNG+MY P+VRK +L ++L EIL TR
Sbjct: 1169 RIVDWRGRNKMGFIDYQRQPGLLGLLESQINIAPNGIMYTRPEVRKSLLAKMLTEILETR 1228
Query: 1367 IMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
+MVK +K + L R+ N RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ
Sbjct: 1229 VMVKGGMKA-NKEDRALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTA 1287
Query: 1427 RSTLEKAISFVNENEKWKAKVIYGDTD 1453
R TLEKAI+ ++ E+W A+V+YGDTD
Sbjct: 1288 RETLEKAIAMIHSVERWGAEVVYGDTD 1314
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 11 FSVRIVSIDHYMAPP------IPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F V + +DHY A P +P D S+ KV PVIRV+G+T GQK C HIH
Sbjct: 4 FRVLLNCVDHYQAAPTCLDPQLPCGDGPTSARTRPKV---PVIRVFGATETGQKVCAHIH 60
Query: 65 RALPYLYV------PCADIPVQLRQEDDGYMHAISLALEKALKVKGSA------------ 106
A PYLY+ + R HA++++ + G+A
Sbjct: 61 GAFPYLYIEYRGSLAMEQVKAATRSLHVSIDHALAVSYRRNAYDPGTAYVAHISLVKGTP 120
Query: 107 --GSKRQH-----------VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYG 153
G H +H L GAV + LQP+ESH+ ++ Q++ DYNLYG
Sbjct: 121 FYGYHVGHKFFFKIYLLNPLHMTRLADLLLQGAVMKRVLQPYESHMQYIPQWMCDYNLYG 180
Query: 154 MGHLHLSKLKFRHPVP 169
++ K+ FR PVP
Sbjct: 181 CAYIDCRKVTFRGPVP 196
>gi|225685289|gb|EEH23573.1| DNA polymerase delta catalytic subunit [Paracoccidioides brasiliensis
Pb03]
Length = 1707
Score = 412 bits (1058), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/547 (40%), Positives = 322/547 (58%), Gaps = 42/547 (7%)
Query: 925 ISQISGPDGRSKPT-PLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINV 983
+SQ+ GP + + SQ GA + ++++S+E+ RG L P+P D I+
Sbjct: 829 LSQVEGPTQKDRHGFKYSQKKPARKVRQGA-QYMSVMSLEIHVNCRGTLVPNPEEDEISC 887
Query: 984 VALAFEND---------SDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHF 1034
+ ++ + + V+ ++ES + + + E+ L +
Sbjct: 888 IFWCVQDGDNDADDEDDETSGLAVGVIALAENESLAAKISPTMVAEFDEETSELDLLTKL 947
Query: 1035 IKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLESKIAAGDSEISER 1093
+ ++ DPDIL G+++ S G+L ERA + L +++SR +S G
Sbjct: 948 VDVVRRCDPDILTGYEVHNSSWGYLIERARYKYDYDLCDELSRVKTDSHGRIGKEN---- 1003
Query: 1094 GITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTV 1153
D WG H S + V GR ++N+WR MRGE+ L YT+
Sbjct: 1004 ------------------------DRWGFNHTSSIRVTGRHMINLWRAMRGELNLLQYTI 1039
Query: 1154 EAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTS 1213
E VA +L ++IP ++ LTKWF S R + + Y R +LNL+I++ ++I+RTS
Sbjct: 1040 ENVAFHLLHQRIPHYHYQDLTKWFQSQRPRDIAKVINYFASRVQLNLKIIDSNELISRTS 1099
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E AR+ G+DFFSV SRGSQ++VES++ R+A +N + ISPG QV Q A+ECLPLVMEP
Sbjct: 1100 EQARILGVDFFSVFSRGSQFKVESLMFRIAKPENLILISPGRKQVGQQNALECLPLVMEP 1159
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDL 1332
+S FY PV+VLDFQSLYPS+MIAYN C+ TCLG+++ + +N LG FR +L
Sbjct: 1160 QSDFYTSPVLVLDFQSLYPSIMIAYNYCYSTCLGRVVEWRGQNKLGFIDFRRPAGLLELF 1219
Query: 1333 KDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
KD++ I PNG++YV ++RK +L ++L EIL TR+MVK +K + L R+ N RQL
Sbjct: 1220 KDQINISPNGMIYVKQEIRKSLLAKMLIEILETRVMVKGGMKAWKDDKS-LQRLLNNRQL 1278
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDT 1452
ALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ R TLEKAI+ ++ E+W A+V+YGDT
Sbjct: 1279 ALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETLEKAIAMIHSVERWNAEVVYGDT 1338
Query: 1453 DRYTVCI 1459
D VC+
Sbjct: 1339 DSVFVCL 1345
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 31/158 (19%)
Query: 43 EVPVIRVYGSTPAGQKTCLHIHRALPYLYVP-------------------CADIPVQLRQ 83
+VPVIRV+G+T GQK C HIH A PYLY+ AD + +
Sbjct: 51 KVPVIRVFGATETGQKVCAHIHGAFPYLYIEYQGSLNPKEVNTAIRTLHMSADHALAVSY 110
Query: 84 EDDGYMHAIS----LALEKALKVKGSAGSKR--------QHVHECSLVRAKKGGAVFDKS 131
+ Y IS + L K + G R +H L + GAV +
Sbjct: 111 RRNAYERKISYVAHITLVKGVPFYGYHVGYRFFLKIYLFNPMHMNRLADLLRQGAVMKRV 170
Query: 132 LQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
LQP+ESH+ +L Q++ DYNLYG +L SK+ FR P+P
Sbjct: 171 LQPYESHLQYLAQWMCDYNLYGCAYLRSSKVMFRAPIP 208
>gi|348531132|ref|XP_003453064.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Oreochromis
niloticus]
Length = 3036
Score = 411 bits (1057), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/557 (42%), Positives = 330/557 (59%), Gaps = 49/557 (8%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
+D SQI GP S +S QD + + LTL+++E+ A +R DL PDP +D I
Sbjct: 2166 KDNSQIEGPSIANSYGFKVSMQNLQDAKALHEVQHLTLMTMELHARTRRDLEPDPEFDPI 2225
Query: 982 NVVALAFENDS-----DHAVEIYVLLY----------CKSESHQRSLVGIPDCKVFVCSK 1026
+ F +D+ D+ ++ C+ + G+ +V +
Sbjct: 2226 CALFYCFSSDTPLPDVDNTQLTGAIVVDKDHQGSSQGCRGRAPLLVRSGVSGLQVTYAAD 2285
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF + I+ FDPDIL+G+++Q S G+L +R++ LG+ L +SR P +SK
Sbjct: 2286 EKMLFDVLVTIMRRFDPDILVGYEVQLHSWGYLLQRSSALGVDLCQQLSRVPGDSK---- 2341
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
+N A AE DE+G + +++ GRI LN+WR+M+ EV
Sbjct: 2342 ----------ENRFA----AE---------RDEYGADTMTEINIIGRITLNLWRVMKTEV 2378
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
LN YT E VA VL ++ P R L+ WF R++ V++ V R + ++++ Q
Sbjct: 2379 TLNNYTFENVAFHVLHQRFPLYSPRTLSDWFDHNTDLYRWKMVDHYVSRVRGCMQLLQQH 2438
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I RTSELAR+FGI FF VL+RGSQYRVESM+LR+A NY+ ++P Q A Q A +C
Sbjct: 2439 DIIGRTSELARLFGIQFFHVLTRGSQYRVESMMLRVAKPLNYVPVTPSIQQRAQQRAPQC 2498
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI----LPSKENTLGVSSF 1322
+PLVMEPES FY++ VVVLDFQSLYPS++IAYN CF TCLG + P E G +S
Sbjct: 2499 IPLVMEPESRFYSNSVVVLDFQSLYPSIVIAYNYCFSTCLGHVDNLGTPD-EFKFGCTSL 2557
Query: 1323 RPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQI 1382
R +L L++++ + P G+ +V VRKGVLP +LEEIL+TRIMVKQ++K +
Sbjct: 2558 RVPPELLYQLRNDITVSPGGIAFVKSSVRKGVLPMMLEEILNTRIMVKQSMKTYK-QDKA 2616
Query: 1383 LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEK 1442
L ++ +ARQL LKLIANVT+GYTAA +SGRMP E+ DSIV R TLE+AI VN+ +K
Sbjct: 2617 LTKLLDARQLGLKLIANVTFGYTAANYSGRMPSVEVGDSIVHKARETLERAIRMVNDTKK 2676
Query: 1443 WKAKVIYGDTDRYTVCI 1459
W A+V+YGDTD V +
Sbjct: 2677 WGARVVYGDTDSMFVLL 2693
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 109/187 (58%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+F+VRIV+ D+Y+ PI D+CYS + V +VPV+R++GSTPAGQKTCLH+H PY
Sbjct: 1 MFAVRIVTADYYLTSPIKDLDVCYSEFRESDVKKVPVVRIFGSTPAGQKTCLHLHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLV--------R 120
+YVP + Q+ + Y+ ++ ++++AL V G+ S QHV + LV
Sbjct: 61 IYVPYDN----YGQQPERYLRQVAFSIDRALNVAMGNPTSNNQHVFKVVLVSGMPYYGYH 116
Query: 121 AK----------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
AK + GAV +KS QPHE HIP+LLQ +DYNLYGM ++
Sbjct: 117 AKEKLFMKIYLYNPQMVKRVCELLQSGAVMNKSYQPHEGHIPYLLQLFIDYNLYGMNLVN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|302658851|ref|XP_003021124.1| hypothetical protein TRV_04773 [Trichophyton verrucosum HKI 0517]
gi|291185005|gb|EFE40506.1| hypothetical protein TRV_04773 [Trichophyton verrucosum HKI 0517]
Length = 1594
Score = 411 bits (1057), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/501 (43%), Positives = 312/501 (62%), Gaps = 36/501 (7%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRS--LV 1014
++++S+EV +RG L P+P D + V + ++ + V+L SE++ S L
Sbjct: 804 MSVMSLEVHVNTRGTLAPNPEEDEVACVFWSVISEEEGRHRGVVVL---SETYGLSSKLK 860
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLND 1073
P + E+ L + + I+ +DPDIL G+++ GS G+L ERA L ++
Sbjct: 861 PEPGIEFQEDMSELDLMNRIVGIVRYYDPDILTGYEVHNGSWGYLIERARKGYDYDLCDE 920
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
SR +S IS D WG H S + V GR
Sbjct: 921 FSRVKSQSH-----GRISRET-----------------------DRWGFNHTSTIRVTGR 952
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
++N+WR MRGE+ L YT+E VA +L ++IP PF LT+WF S R + ++Y
Sbjct: 953 HMINIWRAMRGELNLLQYTMENVAFHLLHKRIPHYPFEDLTRWFKSDRPRDVAKTIQYFS 1012
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
R LNLEI++ ++I+RTSE AR+ GIDF+SV SRGSQ++VES++ R+A +N++ ISP
Sbjct: 1013 SRVDLNLEILDANELISRTSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISP 1072
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG+I+ +
Sbjct: 1073 SRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWR 1132
Query: 1314 -ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
N +G++ + + +LR LKD++ I PNG++YV +VRK +L ++L EIL TR+MVK
Sbjct: 1133 GRNKMGITDYEREPGLLRLLKDKINIAPNGIIYVKQEVRKSLLAKMLTEILETRVMVKNG 1192
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K+ + L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ R TLEK
Sbjct: 1193 MKE-DKDDRPLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEK 1251
Query: 1433 AISFVNENEKWKAKVIYGDTD 1453
AI+ ++ ++W A+V+YGDTD
Sbjct: 1252 AIALIHSVKRWGAEVVYGDTD 1272
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 23/179 (12%)
Query: 11 FSVRIVSIDHYMAPPI---PGY--DICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH--I 63
F V + +DHY A P P + D L+ G + +VPVIRV+G+T GQK+ H +
Sbjct: 4 FRVLLNCVDHYQATPTELDPQFTSDNNDPQLRSGSI-KVPVIRVFGATETGQKSAKHRIV 62
Query: 64 HRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQH----------- 112
+ A+ L+ D + L + H+ + +L VKG
Sbjct: 63 NAAIRSLHA-SIDHALALSYRRNPSDHSAAFVAYISL-VKGIPFYGYYVGYRYYFKVYLL 120
Query: 113 --VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
+H L GAV ++LQP+ESH+ F+ Q++ DY+L+G +++ SK+KFR PVP
Sbjct: 121 NPLHMTRLADLLLQGAVMKRALQPYESHLQFIPQWMCDYSLHGCAYINCSKVKFRPPVP 179
>gi|320036527|gb|EFW18466.1| DNA polymerase zeta catalytic subunit [Coccidioides posadasii str.
Silveira]
Length = 1677
Score = 411 bits (1057), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/507 (42%), Positives = 308/507 (60%), Gaps = 39/507 (7%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFE--------NDSDHAVEIYVLLYCKSES 1008
++++S+EV +R L P+P D I+ + + N+ V+ VL ++ES
Sbjct: 835 MSVMSLEVHVNTRCTLAPNPEEDEISCIFWCIQSGDRSLGVNEPSDEVQTGVLAVAETES 894
Query: 1009 HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLG 1067
+ + ++ S E+ + + + I+ +DPDIL G+++ GS G+L ERA
Sbjct: 895 IAAKIRYDTNAEIEEESSELDVLTKLVDIVRYYDPDILTGYEVHNGSWGYLIERARVKYD 954
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
L +++SR +S G D WG H S
Sbjct: 955 YDLCDELSRVKTDSHGRFGKES----------------------------DRWGFNHTST 986
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ V GR ++N+WR MR E+ L YT+E VA +L ++IP PF LTKWF S R +
Sbjct: 987 IRVTGRHMINIWRAMRSELNLIQYTLENVAFHLLHKRIPHYPFHDLTKWFKSTKPRNLVK 1046
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
V Y + R +LNL+I++ ++I+RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N
Sbjct: 1047 VVNYFITRTRLNLDILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPEN 1106
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
++ ISP QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG
Sbjct: 1107 FILISPSKAQVGQQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLG 1166
Query: 1308 KILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTR 1366
+I+ + N +G ++ +L L+ ++ I PNG+MY P+VRK +L ++L EIL TR
Sbjct: 1167 RIVDWRGRNKMGFIDYQRQPGLLGLLESQINIAPNGIMYTRPEVRKSLLAKMLTEILETR 1226
Query: 1367 IMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
+MVK +K + L R+ N RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ
Sbjct: 1227 VMVKGGMKA-NKEDRALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTA 1285
Query: 1427 RSTLEKAISFVNENEKWKAKVIYGDTD 1453
R TLEKAI+ ++ E+W A+V+YGDTD
Sbjct: 1286 RETLEKAIAMIHSVERWGAEVVYGDTD 1312
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 87/194 (44%), Gaps = 38/194 (19%)
Query: 11 FSVRIVSIDHYMAPP------IPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F V + +DHY A P +P D S+ KV PVIRV+G+T GQK C HIH
Sbjct: 4 FRVLLNCVDHYQAAPTCLDPQLPCGDGPTSARTRPKV---PVIRVFGATETGQKVCAHIH 60
Query: 65 RALPYLYVPCAD-------------------IPVQLRQE--DDGYMHAISLALEKALKVK 103
A PYLY+ + V R+ D G + ++L K
Sbjct: 61 GAFPYLYIEYRGSLAMEQAATRSLHVSIDHALAVSYRRNAYDPGTAYVAHISLVKGTPFY 120
Query: 104 G-SAGSK-------RQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMG 155
G G K +H L GAV + LQP+ESH+ ++ Q++ DYNLYG
Sbjct: 121 GYHVGHKFFFKIYLLNPLHMTRLADLLLQGAVMKRVLQPYESHMQYIPQWMCDYNLYGCA 180
Query: 156 HLHLSKLKFRHPVP 169
++ K+ FR PVP
Sbjct: 181 YIDCRKVTFRGPVP 194
>gi|346977462|gb|EGY20914.1| DNA polymerase zeta catalytic subunit [Verticillium dahliae VdLs.17]
Length = 1499
Score = 411 bits (1056), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/544 (41%), Positives = 321/544 (59%), Gaps = 51/544 (9%)
Query: 926 SQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRYD 979
SQI GP TP + GF Q S+G + ++ +S+EV +RG L PDP +D
Sbjct: 655 SQIDGP------TPRNTHGFRYNQKKKSSGIKHEIQYMSTMSLEVHVNTRGHLVPDPEHD 708
Query: 980 SINVVALAFENDSDHAVEIY--------VLLYCKSESHQRSLVGIPDCKVFVCSKEIHLF 1031
+ + + + D +V ++L S + +V +E+ LF
Sbjct: 709 EVQCIFWSIKADGSISVSQEAAGAMIQGIVLLSSDGSLAERVRRQTSVEVVEEMEELDLF 768
Query: 1032 SHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEI 1090
++I+ + DPDIL G+++ G S G+L ERA L ++ SR S G
Sbjct: 769 VRMVEIVRTHDPDILTGYEVHGSSWGYLIERARVKYDYDLCDEFSRMKSNSHGRIGKEN- 827
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
D WG S + V GR ++NVWR MRGE+ L
Sbjct: 828 ---------------------------DRWGFNTTSTIRVTGRHMINVWRAMRGELNLLQ 860
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
Y++E V +L R+IP + LTKW+ SG R + + Y + R +L+++I+ ++I
Sbjct: 861 YSMENVVWHLLHRRIPHYSWSTLTKWYKSGIHRDMSKLLRYYLSRTRLDIDIIEANELIP 920
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSE AR+ G+DFFSV SRGSQY+VES++ R+A +N++ +SP QV Q A+ECLPLV
Sbjct: 921 RTSEQARLLGVDFFSVFSRGSQYKVESIMFRIAKPENFILVSPSRQQVGGQNALECLPLV 980
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVL 1329
MEP+S FY+ PV+VLDFQSLYPS+MIAYNLC+ T LG+I + N +G + ++ +L
Sbjct: 981 MEPQSAFYSSPVLVLDFQSLYPSVMIAYNLCYSTFLGRITSWRGMNKMGFTEYKRHQRLL 1040
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
LKD + I PNG+MY P++RK +L ++L EIL TR+MVK +K+ + L ++ N
Sbjct: 1041 ELLKDHINITPNGMMYAKPEIRKSLLAKMLGEILETRVMVKSGMKQ-DKDDRSLQQLLNN 1099
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIY 1449
RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ E+W A+V+Y
Sbjct: 1100 RQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSQERWNAEVVY 1159
Query: 1450 GDTD 1453
GDTD
Sbjct: 1160 GDTD 1163
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 125 GAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
G + + QP+E+H+ +LLQF+ D+NLYG G L S + FR PVP
Sbjct: 87 GVIMKRKFQPYEAHLQYLLQFMTDFNLYGCGFLDASTVHFRAPVP 131
>gi|116193749|ref|XP_001222687.1| hypothetical protein CHGG_06592 [Chaetomium globosum CBS 148.51]
gi|88182505|gb|EAQ89973.1| hypothetical protein CHGG_06592 [Chaetomium globosum CBS 148.51]
Length = 1755
Score = 411 bits (1056), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/558 (41%), Positives = 331/558 (59%), Gaps = 63/558 (11%)
Query: 924 DISQISGPDGRSKPTPLSQIGF---QDPASAGA---GEQLTLLSIEVQAESRGDLRPDPR 977
++SQI GP TP + GF Q S + ++ +S+E+ SRG L P+P
Sbjct: 839 ELSQIIGP------TPKNTHGFKYSQKQKSTSVQHEAQYMSTMSLEIHVNSRGKLVPNPE 892
Query: 978 YDSINVV----------ALAFENDSDHAVEIYVL----LYCKSESHQRSLVGIPDCKVFV 1023
D + + ++D + I VL L K +Q S C+V
Sbjct: 893 EDEVQCIFWCLRSDEQCLFGSQSDDNTITGIVVLSGDGLLAKQVRNQTS------CQVDE 946
Query: 1024 CSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLESK 1082
+ E+ L ++I+ + DPDIL G+++ G S G+L ERA H L N+ SR ES
Sbjct: 947 EASELDLLVKMVEIVRAHDPDILTGYEVHGSSWGYLVERAMHKYEFDLCNEFSRMKSESF 1006
Query: 1083 IAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLM 1142
G K+A D WG S LHV GR ++NVWR M
Sbjct: 1007 GKFG-------------------------KNA---DAWGSKTTSNLHVTGRHIINVWRAM 1038
Query: 1143 RGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEI 1202
RGE+ L Y++E V +L R+IP ++ LT W+ SG R + + Y + R +L++EI
Sbjct: 1039 RGELNLLQYSMENVVWHLLHRRIPHYSWQTLTDWYLSGRPRDLSKVLRYYLRRTRLDIEI 1098
Query: 1203 MNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQP 1262
+ ++I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L +SP QV SQ
Sbjct: 1099 IEANELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPNRKQVGSQN 1158
Query: 1263 AMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSS 1321
A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ TCLG+++ + N +G +
Sbjct: 1159 ALECLPLVMEPQSAFYPSPLLVLDFQSLYPSVMIAYNYCYSTCLGRVVSWRGTNKMGFTE 1218
Query: 1322 FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
+R +LR LKD + I PNG+MY P++RK +L ++L EIL TR+MVK +K+ +
Sbjct: 1219 YRRREGLLRLLKDHINIAPNGMMYTKPEIRKSLLAKMLTEILETRVMVKSGMKE-DKDDK 1277
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE 1441
L ++ + RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ R TLE+AI++++ E
Sbjct: 1278 TLQKLLHNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTSRETLERAIAYIHSVE 1337
Query: 1442 KWKAKVIYGDTDRYTVCI 1459
+W A+V+YGDTD V +
Sbjct: 1338 RWGAEVVYGDTDSLFVYL 1355
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 90/196 (45%), Gaps = 48/196 (24%)
Query: 11 FSVRIVSIDHYMAPPIPGYDIC-----YSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
F VR+ IDHY A P YD Y S + K +VPVIRV+GST GQK C H+H
Sbjct: 4 FRVRLNCIDHYQATPT-RYDPHLRRDDYRS-EPNKQPKVPVIRVFGSTETGQKVCAHVHG 61
Query: 66 ALPYLYVPCA---DIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAK 122
A PYLY+ D P Y++A+ L++++AL + +R+ + V
Sbjct: 62 AFPYLYIEYRGPLDKPTV-----SEYIYALHLSIDRALAINYRRDQRREPQRFVARVTLV 116
Query: 123 KG---------------------------------GAVFDKSLQPHESHIPFLLQFLVDY 149
KG G V + QP+E+H+ +LLQF+ DY
Sbjct: 117 KGVPFYGFHVGYRYYLKIYMLNPVVMTRLADLLLQGLVMGQKFQPYEAHLQYLLQFMADY 176
Query: 150 NLYGMGHLHLSKLKFR 165
NLYG +L ++FR
Sbjct: 177 NLYGCDYLDAEDVRFR 192
>gi|432107870|gb|ELK32927.1| DNA polymerase zeta catalytic subunit [Myotis davidii]
Length = 3123
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/590 (39%), Positives = 331/590 (56%), Gaps = 81/590 (13%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2221 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2280
Query: 982 NVVALAFENDS-----DHAVEIYVLLYCKSES-------HQRSLV---GIPDCKVFVCSK 1026
+ +D+ D V++ K ++ +Q L+ GI +V +
Sbjct: 2281 CALFYCISSDTPLPNTDKTELTGVIVIDKDKTVSSQDIRYQTPLLIRSGITRLEVTYAAD 2340
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2341 EKGLFQEIADIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2392
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE D++G S +++ GRI LN+WR+MR EV
Sbjct: 2393 DDKIENR----------FAAE---------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 2433
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ + R + NL+++ QL
Sbjct: 2434 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLEQL 2493
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 2494 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPNVQQRSQMRAPQC 2553
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2554 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEFKFGCTSLR 2613
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNG+ +V P VRKGVLP +LEEIL TR+MVKQ++K + L
Sbjct: 2614 VPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPIMLEEILKTRLMVKQSMKAYK-QDRAL 2672
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAE-------------------------- 1417
R+ +ARQL LKLIANVT+GYTAA FSGRMPC E
Sbjct: 2673 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIERGMERDRESETSMREKHRSAASCTST 2732
Query: 1418 --------LADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
+ DSIV R TLE+AI VN+ +KW A+V+YGDTD V +
Sbjct: 2733 TGDVPATQVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSMFVLL 2782
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 35/141 (24%)
Query: 56 GQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVH 114
GQKTCLH+H PYLYVP Q+ + Y+ ++ ++++AL V G+ S QHV
Sbjct: 6 GQKTCLHLHGIFPYLYVPYDG----YGQQPESYLSQMAFSIDRALNVALGTPSSTTQHVF 61
Query: 115 ECSLVRAK------------------------------KGGAVFDKSLQPHESHIPFLLQ 144
+ SLV + GA+ +K QPHE+HIP+LLQ
Sbjct: 62 KVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQ 121
Query: 145 FLVDYNLYGMGHLHLSKLKFR 165
+DYNLYGM ++L+ +KFR
Sbjct: 122 LFIDYNLYGMNLINLAAVKFR 142
>gi|347840175|emb|CCD54747.1| similar to DNA polymerase zeta catalytic subunit [Botryotinia
fuckeliana]
Length = 1707
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/550 (40%), Positives = 326/550 (59%), Gaps = 52/550 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP T + GF+ + + ++++S+EV +RG P+P
Sbjct: 828 LSQIDGP------TQKNPHGFKYTQNGKTINVQREAQYMSVMSLEVHVNTRGGFVPNPEE 881
Query: 979 DSINVVALAFENDSDHAVE-------IYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLF 1031
D I + F+ D D+ +E I VL ++ ++ +P +V + E+ L
Sbjct: 882 DEIQCIFFCFQAD-DNGIEGSPSKLGIAVLSADENNVAEKISNQVP-FEVHAETSELDLL 939
Query: 1032 SHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEI 1090
++I+ DPDIL G+++ GGS G+L ERA L ++ SR +S G
Sbjct: 940 VRIVEIVRECDPDILTGFEVHGGSWGYLIERARTKYDYDLCDEFSRMKDQSYGRFG---- 995
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
DN D+WG + S + V GR ++N+WR MR E+ L
Sbjct: 996 -----KDN-------------------DKWGFDNTSTIRVTGRHIINIWRAMRAELNLLQ 1031
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
+T+E VA +L R+IP + L W+ +G R + + Y V +LNLEI+ Q ++I
Sbjct: 1032 HTLENVAFHLLHRRIPHYSWADLRNWYTNGTARDLSKVLAYYVSHVELNLEILEQTELIP 1091
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N++ ISP QV Q A+ECLPLV
Sbjct: 1092 RTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGGQNALECLPLV 1151
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVL 1329
MEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+++ + N +G + + + +L
Sbjct: 1152 MEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTYLGRVVNWRGTNKMGFTEYTREDRLL 1211
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
LKD + I PNG+MY P +RK +L ++L EIL TR+MVK + KL + L R+ N
Sbjct: 1212 ELLKDHINIAPNGMMYAKPNIRKSLLAKMLGEILETRVMVKSGM-KLDKEDKALQRLLNN 1270
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIY 1449
RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ ++W A+V+Y
Sbjct: 1271 RQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIALIHSVKRWGAEVVY 1330
Query: 1450 GDTDRYTVCI 1459
GDTD V +
Sbjct: 1331 GDTDSLFVYL 1340
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 95/198 (47%), Gaps = 40/198 (20%)
Query: 9 NIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
++F VR+ IDHY A P P K +VPVIRV+GST GQK C HIH
Sbjct: 2 DLFRVRLNCIDHYQAIPSQFDPRLKRNIEPSDLYKEPKVPVIRVFGSTETGQKVCAHIHG 61
Query: 66 ALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA 121
A PYLY+ + L + G Y+H + L+++ AL V + + + V +LV+A
Sbjct: 62 AFPYLYI---EYEGSLDPHEVGSYIHRLHLSIDYALAVSYRRNAYDGNAKFVARITLVKA 118
Query: 122 K------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ G V + QP+E+H+ FLLQ++ DYNL
Sbjct: 119 VPFYGFHVGYRFYLKIYMLNPVVMTRLADILRQGTVMKRVFQPYEAHLQFLLQWMADYNL 178
Query: 152 YGMGHLHLSKLKFRHPVP 169
YG G++ SK FR PVP
Sbjct: 179 YGCGYIDSSKATFRGPVP 196
>gi|342878035|gb|EGU79446.1| hypothetical protein FOXB_10031 [Fusarium oxysporum Fo5176]
Length = 1682
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/543 (40%), Positives = 319/543 (58%), Gaps = 50/543 (9%)
Query: 926 SQISGPDGRSKPTPLSQIGFQ-DPASAGAGEQ-----LTLLSIEVQAESRGDLRPDPRYD 979
SQI GP TP ++ GF+ P Q ++ +S+EV +RG P+P D
Sbjct: 814 SQIDGP------TPKNKHGFKYTPGKKSTSVQHEIQYMSTMSLEVHVNTRGKFVPNPEED 867
Query: 980 SINVVALAFEND------SDHA-VEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFS 1032
+ V A ++D D A V+ +LL + + + +V + E+ L
Sbjct: 868 EVQCVFWAIKSDGTASGSQDSAGVQTGILLLSNDAEFTQRIQRQTNAEVIEENSELDLMV 927
Query: 1033 HFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEIS 1091
++I+ + DPDIL G+++ G S G+L ERA L ++ SR ES G
Sbjct: 928 RMVEIVRNHDPDILTGYEVHGSSWGYLIERARLKYDYNLCDEFSRMKTESHGRFGKEN-- 985
Query: 1092 ERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMY 1151
D WG S + V GR ++NVWR MRGE+ L Y
Sbjct: 986 --------------------------DRWGFNTTSTIRVTGRHMVNVWRAMRGELNLLQY 1019
Query: 1152 TVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINR 1211
T+E V +L R+IP ++ LT W+ G R R + Y R K++LEI++ ++++R
Sbjct: 1020 TMENVVWHLLHRRIPHYSWQSLTNWYKGGKHRELNRMLRYYQNRTKIDLEILDANELVSR 1079
Query: 1212 TSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVM 1271
TSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L +SP QV Q A+ECLPLVM
Sbjct: 1080 TSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPNRKQVGGQNALECLPLVM 1139
Query: 1272 EPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLR 1330
EP+S FY P++VLDFQSLYPS+MIAYN C+ T LG++ + N +G + ++ +L
Sbjct: 1140 EPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRVTDWRGMNKMGFTEYKRQKGLLA 1199
Query: 1331 DLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNAR 1390
L+D + I PNG+MY ++RK +L ++L EIL TR+MVK +K+ + L ++ N R
Sbjct: 1200 LLEDYINIAPNGMMYAKTEIRKSLLAKMLTEILETRVMVKSGMKQ-DKDDKTLQQLLNNR 1258
Query: 1391 QLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYG 1450
QLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI++++ EKW A+V+YG
Sbjct: 1259 QLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAYIHSVEKWGAEVVYG 1318
Query: 1451 DTD 1453
DTD
Sbjct: 1319 DTD 1321
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 88/186 (47%), Gaps = 26/186 (13%)
Query: 9 NIFSVRIVSIDHYMAPPIP-----GYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
++F VR+ IDHY A P DI S + G VPV+RV+GST GQK C HI
Sbjct: 2 DLFRVRLNCIDHYQATPSRYDPQLRNDIRPSQISKGP--RVPVVRVFGSTETGQKVCAHI 59
Query: 64 HRALPYLYV-------PCAD--IPVQLR--QEDDGYMHAISLALEKALKVKGSAGSKR-- 110
H A PYLYV P D + V R Q+ D + L K + G R
Sbjct: 60 HGAFPYLYVEYEGGLSPDEDHALAVSYRRDQKGDSARFVARITLVKGVPFYGFHVGYRFF 119
Query: 111 ------QHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKF 164
+ L + G + QP+E+H+ +LLQF+ D+NLYG +L S +F
Sbjct: 120 LKIYMFNPIVMTRLADLLQQGVIMKNKFQPYEAHLQYLLQFMTDFNLYGCDYLDASVTRF 179
Query: 165 RHPVPD 170
R PVP+
Sbjct: 180 RSPVPE 185
>gi|327305973|ref|XP_003237678.1| hypothetical protein TERG_08729 [Trichophyton rubrum CBS 118892]
gi|326460676|gb|EGD86129.1| hypothetical protein TERG_08729 [Trichophyton rubrum CBS 118892]
Length = 1699
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/501 (42%), Positives = 312/501 (62%), Gaps = 36/501 (7%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
++++S+EV +RG L P+P D + V + +++ + V+L SE++ S
Sbjct: 739 MSVMSLEVHVNTRGTLAPNPEEDEVACVFWSVKSEEEGRHRGIVVL---SETYGLSSKLK 795
Query: 1017 PDCKVFVCSK--EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLND 1073
P+ ++ + E+ L + + I+ +DPDIL G+++ GS G+L ERA L ++
Sbjct: 796 PEPRLEFQEEMSELDLMNRIVGIVRYYDPDILTGYEVHNGSWGYLIERARKGYDYDLCDE 855
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
SR +S G D WG H S + V GR
Sbjct: 856 FSRVKSQSHGRIGRET----------------------------DRWGFNHTSTIRVTGR 887
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
++N+WR MRGE+ L YT+E VA +L ++IP PF LT+WF S R + ++Y
Sbjct: 888 HMINIWRAMRGELNLLQYTMENVAFHLLHKRIPHYPFEDLTRWFKSDRPRDVAKTIQYFS 947
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
R LNLEI++ ++I+RTSE AR+ GIDF+SV SRGSQ++VES++ R+A +N++ ISP
Sbjct: 948 SRVDLNLEILDANELISRTSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISP 1007
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG+I+ +
Sbjct: 1008 SRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWR 1067
Query: 1314 -ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
N +G++ + + +L LKD++ I PNG++Y +VRK +L ++L EIL TR+MVK
Sbjct: 1068 GRNKMGITDYEREPGLLGLLKDKINIAPNGIIYAKQEVRKSLLAKMLTEILETRVMVKNG 1127
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K+ + L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ R TLEK
Sbjct: 1128 MKE-DKDDRPLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEK 1186
Query: 1433 AISFVNENEKWKAKVIYGDTD 1453
AI+ ++ ++W A+V+YGDTD
Sbjct: 1187 AIALIHSVKRWGAEVVYGDTD 1207
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 36/45 (80%)
Query: 125 GAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
GAV ++LQP+ESH+ F+ Q++ DY+L+G +++ SK+KFR PVP
Sbjct: 70 GAVMKRALQPYESHLQFIPQWMCDYSLHGCAYINCSKVKFRPPVP 114
>gi|154291721|ref|XP_001546441.1| hypothetical protein BC1G_15151 [Botryotinia fuckeliana B05.10]
Length = 1710
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/550 (40%), Positives = 326/550 (59%), Gaps = 52/550 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP T + GF+ + + ++++S+EV +RG P+P
Sbjct: 831 LSQIDGP------TQKNPHGFKYTQNGKTINVQREAQYMSVMSLEVHVNTRGGFVPNPEE 884
Query: 979 DSINVVALAFENDSDHAVE-------IYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLF 1031
D I + F+ D D+ +E I VL ++ ++ +P +V + E+ L
Sbjct: 885 DEIQCIFFCFQAD-DNGIEGSPSKLGIAVLSADENNVAEKISNQVP-FEVHAETSELDLL 942
Query: 1032 SHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEI 1090
++I+ DPDIL G+++ GGS G+L ERA L ++ SR +S G
Sbjct: 943 VRIVEIVRECDPDILTGFEVHGGSWGYLIERARTKYDYDLCDEFSRMKDQSYGRFG---- 998
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
DN D+WG + S + V GR ++N+WR MR E+ L
Sbjct: 999 -----KDN-------------------DKWGFDNTSTIRVTGRHIINIWRAMRAELNLLQ 1034
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
+T+E VA +L R+IP + L W+ +G R + + Y V +LNLEI+ Q ++I
Sbjct: 1035 HTLENVAFHLLHRRIPHYSWADLRNWYTNGTARDLSKVLAYYVSHVELNLEILEQTELIP 1094
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N++ ISP QV Q A+ECLPLV
Sbjct: 1095 RTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGGQNALECLPLV 1154
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVL 1329
MEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+++ + N +G + + + +L
Sbjct: 1155 MEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTYLGRVVNWRGTNKMGFTEYTREDRLL 1214
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
LKD + I PNG+MY P +RK +L ++L EIL TR+MVK + KL + L R+ N
Sbjct: 1215 ELLKDHINIAPNGMMYAKPNIRKSLLAKMLGEILETRVMVKSGM-KLDKEDKALQRLLNN 1273
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIY 1449
RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ ++W A+V+Y
Sbjct: 1274 RQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIALIHSVKRWGAEVVY 1333
Query: 1450 GDTDRYTVCI 1459
GDTD V +
Sbjct: 1334 GDTDSLFVYL 1343
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 95/198 (47%), Gaps = 40/198 (20%)
Query: 9 NIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
++F VR+ IDHY A P P K +VPVIRV+GST GQK C HIH
Sbjct: 5 DLFRVRLNCIDHYQAIPSQFDPRLKRNIEPSDLYKEPKVPVIRVFGSTETGQKVCAHIHG 64
Query: 66 ALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA 121
A PYLY+ + L + G Y+H + L+++ AL V + + + V +LV+A
Sbjct: 65 AFPYLYI---EYEGSLDPHEVGSYIHRLHLSIDYALAVSYRRNAYDGNAKFVARITLVKA 121
Query: 122 K------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ G V + QP+E+H+ FLLQ++ DYNL
Sbjct: 122 VPFYGFHVGYRFYLKIYMLNPVVMTRLADILRQGTVMKRVFQPYEAHLQFLLQWMADYNL 181
Query: 152 YGMGHLHLSKLKFRHPVP 169
YG G++ SK FR PVP
Sbjct: 182 YGCGYIDSSKATFRGPVP 199
>gi|169595886|ref|XP_001791367.1| hypothetical protein SNOG_00690 [Phaeosphaeria nodorum SN15]
gi|160701180|gb|EAT92185.2| hypothetical protein SNOG_00690 [Phaeosphaeria nodorum SN15]
Length = 1584
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/546 (40%), Positives = 321/546 (58%), Gaps = 34/546 (6%)
Query: 913 AEPNACADCLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDL 972
A P+ + + +SQI GP ++K + + ++++S+EV SRG L
Sbjct: 663 ARPSRKREVPEYLSQIDGPTQKNKHGFKYSQNKKLTTVKHETQYMSIMSLEVHVNSRGSL 722
Query: 973 RPDPRYDSINVVALAF---ENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIH 1029
PDP D I + + EN + + +L + + V E+
Sbjct: 723 VPDPAEDEIQCIFYSIQGEENATTDRPRLGILCLSTDDGIVERIAKQSSVDVEHEEDELD 782
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDS 1088
L + + I+ FDPDIL G+++ S G+L ERA L ++ISR +S
Sbjct: 783 LINRIVDIVRQFDPDILAGYEVHNSSWGYLIERARMKYEYNLCDEISRMKSQS------- 835
Query: 1089 EISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKL 1148
K+A D WG TH S + + GR ++N+WR MRGE+ L
Sbjct: 836 ------------------HGRFGKEA---DRWGFTHTSTIRITGRHMINIWRAMRGELNL 874
Query: 1149 NMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDM 1208
YT+E V +L R+IP LT W+ S R + +++ + R +LNL+I+ ++
Sbjct: 875 LQYTMENVVFHLLHRRIPHYQHSDLTGWYRSSKPRELAKVLDHFLTRVQLNLDILEANEI 934
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
+ RTSE AR+ G+DFF+V+SRGSQ++VES + R+A +N++ ISP QV Q A+ECLP
Sbjct: 935 VPRTSEQARLLGVDFFAVISRGSQFKVESTMFRIAKPENFILISPSRKQVGQQNALECLP 994
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLH 1327
LVMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ TCLG+I+ + N +G F+ +
Sbjct: 995 LVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTCLGRIVSWRGRNKMGFMDFKREPQ 1054
Query: 1328 VLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIF 1387
+L +KD + I PNG+MYV P++RK +L ++L EIL TR+M+K +K+ + L ++
Sbjct: 1055 LLELVKDYINIAPNGMMYVKPEMRKSLLAKMLGEILETRVMIKSGMKQ-DKDDKTLQQLL 1113
Query: 1388 NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKV 1447
N RQLALKL+ANVTYGY +A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ EKW A+V
Sbjct: 1114 NNRQLALKLLANVTYGYASASFSGRMPCSEIADSIVQTGRETLEKAIALIHATEKWGAEV 1173
Query: 1448 IYGDTD 1453
+YGDTD
Sbjct: 1174 VYGDTD 1179
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 9 NIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
+ F R+ ID+Y A P P + +VP+IR +G+T GQK C HIH
Sbjct: 2 DTFRFRLNCIDNYQATPTDLDPVLRRNAGPTKRQDAPQVPIIRAFGATETGQKVCAHIHG 61
Query: 66 ALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGG 125
ALPYLY+ + L +E S+ + LKV VH G
Sbjct: 62 ALPYLYL---EYNGSLEKEVGVPFFGYSVGYKIFLKV-----YMLNPVHMTRFADLLHSG 113
Query: 126 AVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDA 171
A+ D+ QP+ESH+ +LLQ++ DYNLYG ++ +K+ FR PVPD+
Sbjct: 114 AIMDRVFQPYESHLQYLLQWMCDYNLYGCDYIDCAKVLFRGPVPDS 159
>gi|339242365|ref|XP_003377108.1| DNA polymerase family B, exonuclease domain protein [Trichinella
spiralis]
gi|316974121|gb|EFV57647.1| DNA polymerase family B, exonuclease domain protein [Trichinella
spiralis]
Length = 1170
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/507 (43%), Positives = 309/507 (60%), Gaps = 42/507 (8%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSES---HQRSL 1013
L +S+E+ +R + RPDP+ D I + A + ++ + + E Q+
Sbjct: 697 LCTMSMELHVCTRDNFRPDPQLDPIVAIFYAVHVNGHDCIDHFGCIVVSEEEAAFRQQFA 756
Query: 1014 VGIPDCK--VFVCSK-EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
I C+ + +C + E L F I+ +FDPD+++G++IQ S G+L ERA+ LG+ +
Sbjct: 757 TTIQCCEPDLSICVQTEFELLEQFSNIVSNFDPDVIVGYEIQMLSWGYLFERASFLGMDM 816
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
SR P ++K + S +D+W + +HV
Sbjct: 817 CTRCSRIPDKNKQSRSSS----------------------------DDDWW--SMANIHV 846
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GRIVLN+W +MR V L +YT E V VLR+++P F LT W + +R+R +
Sbjct: 847 AGRIVLNLWHIMRSVVTLGIYTFENVVFHVLRKRVPFYSFEQLTHWHTT--SHSRWRVYD 904
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y R NLE++ Q D++NRTSELAR+FGI FF VLSRGSQ+RVESMLLR+ + +++
Sbjct: 905 YYKLRVCANLEMLIQRDILNRTSELARLFGIQFFDVLSRGSQFRVESMLLRMTKARQFVS 964
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
+SP Q A ECLPL +EPES Y DPVVVLDFQSLYPS+ IAYN C+ TCLGK+
Sbjct: 965 LSPNPFQRRRMEAPECLPLNLEPESQLYHDPVVVLDFQSLYPSICIAYNYCYSTCLGKVK 1024
Query: 1311 PSKEN---TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
++ T G S+ +L L+ L + P GV +V +R+G+LP++LEEILSTR+
Sbjct: 1025 KLRKADLITFGCSTLSVPSALLAKLRPHLNVSPAGVAFVNSDLRRGILPQMLEEILSTRV 1084
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
MVK+ +++ + ++ ++ +I ++RQL LKLIANVTYGYT+A FSGRMPC E+ADSIV GR
Sbjct: 1085 MVKRCMQQYSTNKPLV-KILDSRQLGLKLIANVTYGYTSANFSGRMPCVEVADSIVSKGR 1143
Query: 1428 STLEKAISFVNENEKWKAKVIYGDTDR 1454
TLE AI FVN NEKW A+V+YGDTDR
Sbjct: 1144 ETLENAIRFVNRNEKWNARVVYGDTDR 1170
>gi|46129445|ref|XP_389074.1| hypothetical protein FG08898.1 [Gibberella zeae PH-1]
Length = 1681
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/606 (38%), Positives = 340/606 (56%), Gaps = 66/606 (10%)
Query: 870 SLKGSDIRPVLEEMHQEADEMISTEPTPDLNGVTAIMHNEGHIAEPNACADCLQDISQIS 929
S + + + P +E+ E TPD +G+ P+ +C SQI
Sbjct: 771 SWEFASLPPTYKEVEDWGLEQERKANTPDGSGL------------PSTHRNCH---SQIE 815
Query: 930 GPDGRSKPTPLSQIGFQDPASAGAG------EQLTLLSIEVQAESRGDLRPDPRYDSINV 983
GP TP ++ GF+ A + ++ +S+EV +RG+ P+P D +
Sbjct: 816 GP------TPKNRHGFKYTPGKKATSVKHEVQYMSTMSLEVHVNTRGNFVPNPEEDEVQC 869
Query: 984 VALAFEND--------SDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFI 1035
A ++D S V+ +LL + + + + E+ L +
Sbjct: 870 AFWAIKSDGTSTDSQSSAGTVQTGILLLSNDAEFTQRVQRQTSADIIEETSELDLMVRMV 929
Query: 1036 KILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERG 1094
+I+ + DPDIL G+++ G S G+L ERA L ++ SR ES G
Sbjct: 930 EIVRNHDPDILTGYEVHGSSWGYLIERARLKYDYNLCDEFSRMKTESHGRFGK------- 982
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
DN D WG S + V GR ++NVWR MRGE+ L YT+E
Sbjct: 983 --DN-------------------DRWGFNTTSTIRVTGRHMVNVWRAMRGELNLLQYTME 1021
Query: 1155 AVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSE 1214
VA +L ++IP ++ LT W+ SG R R + Y R KL++EI++ ++I RTSE
Sbjct: 1022 NVAWHLLHKRIPHYSWKSLTSWYKSGKHRELNRMLRYYQNRTKLDIEILDANELIARTSE 1081
Query: 1215 LARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPE 1274
AR+ G+DFFSV SRGSQ++VES++ R+A +N+L +SP QV Q A+ECLPLVMEP+
Sbjct: 1082 QARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPSRKQVGGQNALECLPLVMEPQ 1141
Query: 1275 SGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT-LGVSSFRPDLHVLRDLK 1333
S FY P++VLDFQSLYPS+MIAYN C+ T LG++ + + +G + ++ +L LK
Sbjct: 1142 SAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRVTNWRGTSKMGFTEYKRQQGLLTLLK 1201
Query: 1334 DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLA 1393
D + I PNG+MY ++RK +L ++L EIL TR+MVK +K+ + L ++ N RQLA
Sbjct: 1202 DYINIAPNGMMYAKTEIRKSLLAKMLTEILETRVMVKSGMKQ-DKDDKTLQQLLNNRQLA 1260
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
LKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI++++ EKW A+V+YGDTD
Sbjct: 1261 LKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAYIHSVEKWGAEVVYGDTD 1320
Query: 1454 RYTVCI 1459
+ +
Sbjct: 1321 SLFISL 1326
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 44/201 (21%)
Query: 9 NIFSVRIVSIDHYMAP-----PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
++F +R+ IDHY A P DI S + G +VP++R++G+T GQK C HI
Sbjct: 2 DLFRIRLNCIDHYQATATQYDPQLRNDIRPSQISKGP--KVPIVRIFGATETGQKVCAHI 59
Query: 64 HRALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKVKGSAGSKRQHVHECSLVRAK 122
H A PYLYV + L ++ G Y++ + L+++ AL V K + + +
Sbjct: 60 HGAFPYLYV---EYEGGLSPDEVGAYIYRLHLSIDHALAVSYRRDQKNDNARFVARITLV 116
Query: 123 KG---------------------------------GAVFDKSLQPHESHIPFLLQFLVDY 149
KG G + QP+E+H+ FLLQF+ D+
Sbjct: 117 KGIPFYGFHVGYRFFLKIYMFNPVVMTRLADLLQQGVIMKHKFQPYEAHLQFLLQFMTDF 176
Query: 150 NLYGMGHLHLSKLKFRHPVPD 170
NLYG +L S FR PVP+
Sbjct: 177 NLYGCDYLESSSTGFRSPVPE 197
>gi|302919112|ref|XP_003052793.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733733|gb|EEU47080.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1682
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/538 (40%), Positives = 314/538 (58%), Gaps = 39/538 (7%)
Query: 926 SQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVA 985
SQI GP ++K G + + + ++ +S+EV +RG P+P D + V
Sbjct: 813 SQIDGPTPKNKHGFKYTQGKKTTSVEHEAQYMSTMSLEVHVNTRGKFVPNPEEDEVQCVF 872
Query: 986 LAFENDSD--------HAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKI 1037
A ++D AV+ +L+ + +V + E+ L ++I
Sbjct: 873 WALKSDETVIGSQNQAEAVQTGILVLAGDSDLTERIRRQTTAEVIEETSELDLMVRMVEI 932
Query: 1038 LCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGIT 1096
+ + DPDIL G+++ G S G++ ERA L ++ SR ES G
Sbjct: 933 VRTHDPDILTGYEVHGSSWGYMIERARLKYDYNLCDEFSRMKTESHGRFGKEN------- 985
Query: 1097 DNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAV 1156
D WG S + V GR ++NVWR MRGE+ L YT+E V
Sbjct: 986 ---------------------DRWGFNTTSTIRVTGRHMINVWRAMRGELNLLQYTMENV 1024
Query: 1157 AETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELA 1216
+L R+IP ++ LT W+ SG R R + Y R +L++EI+ ++I RTSE A
Sbjct: 1025 VWHLLHRRIPHYSWKSLTSWYKSGKHRELGRMLRYYQNRTRLDIEILEANELIARTSEQA 1084
Query: 1217 RVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESG 1276
R+ G+DFFSV SRGSQ++VES++ R+A +N+L +SP QV Q A+ECLPLVMEP+S
Sbjct: 1085 RLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPSRKQVGGQNALECLPLVMEPQSA 1144
Query: 1277 FYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDE 1335
FY P+VVLDFQSLYPS+MIAYN C+ T LG+I + N +G + ++ +L L+D
Sbjct: 1145 FYNSPLVVLDFQSLYPSVMIAYNYCYSTFLGRITNWRGMNKMGFTEYKRQQGLLALLEDY 1204
Query: 1336 LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALK 1395
+ I PNG+MY ++RK +L ++L EIL TR+MVK +K+ ++L ++ N RQLALK
Sbjct: 1205 INIAPNGMMYAKTEIRKSLLAKMLTEILETRVMVKSGMKQ-DKDDKVLQQLLNNRQLALK 1263
Query: 1396 LIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
L+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI++++ EKW A+V+YGDTD
Sbjct: 1264 LLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAYIHSVEKWGAEVVYGDTD 1321
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 95/199 (47%), Gaps = 40/199 (20%)
Query: 9 NIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
++F VR+ IDHY A P P Q K +VPV+R++GST GQK C H+H
Sbjct: 2 DLFRVRLNCIDHYQATPTRYDPQLRNDVRPSQISKGPKVPVVRIFGSTETGQKVCAHVHG 61
Query: 66 ALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA 121
A PYLYV + L ++ G Y++ L+++ AL V + G + V +LV+
Sbjct: 62 AFPYLYV---EYQGSLAPDEVGAYIYRFHLSIDHALAVSYRRDKKGDNARFVARITLVKG 118
Query: 122 K------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ G + + QP+E+H+ +LLQF+ D+NL
Sbjct: 119 VPFYGFHVGYRFFLKIYMFNPVVMTRLADLLQQGVIMKQKFQPYEAHLQYLLQFMTDFNL 178
Query: 152 YGMGHLHLSKLKFRHPVPD 170
YG +L S +FR PVP+
Sbjct: 179 YGCDYLDASSTRFRSPVPE 197
>gi|296804246|ref|XP_002842975.1| polymerase zeta subunit [Arthroderma otae CBS 113480]
gi|238845577|gb|EEQ35239.1| polymerase zeta subunit [Arthroderma otae CBS 113480]
Length = 1625
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/501 (42%), Positives = 308/501 (61%), Gaps = 36/501 (7%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAF--ENDSDHAVEIYVLLYCKSESHQRSLV 1014
++++S+EV +RG L P+P D + V +F E+D H + + Y S L
Sbjct: 768 MSVMSLEVHVNTRGSLAPNPEQDEVACVFWSFISEDDGRHRGIVALSEYGDLSSR---LK 824
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLND 1073
P+ + E+ L + I ++ +DPDIL G++I GS G+L ERA L ++
Sbjct: 825 PEPEVEFHEDISELDLINRIIGVVRYYDPDILTGYEIHNGSWGYLIERARKCYDYDLCDE 884
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
SR +S + ++A D WG H S + + GR
Sbjct: 885 FSRVKSQS-------------------------HGRIGREA---DRWGFNHTSTIRITGR 916
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
++N+WR MRGE+ L YT+E V +L ++IP PF LTKWF S R + ++Y
Sbjct: 917 HMINIWRAMRGELNLLQYTLENVTFHLLHKRIPHYPFEDLTKWFKSDRPRDVAKTLQYFS 976
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
R LNL+I+ ++I+RTSE AR+ GIDF+SV SRGSQ++VES++ R+A +N++ ISP
Sbjct: 977 LRVDLNLQILEANELISRTSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISP 1036
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG+I+ +
Sbjct: 1037 SRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVSWR 1096
Query: 1314 -ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
N +G++ + + +L LKD++ I PNG++Y VRK +L ++L EIL TR+M+K
Sbjct: 1097 GRNKMGITDYEREPGLLGLLKDQINIAPNGIIYAKQDVRKSLLAKMLTEILETRVMIKNG 1156
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K+ + L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ R TLEK
Sbjct: 1157 MKE-DKDDKPLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEK 1215
Query: 1433 AISFVNENEKWKAKVIYGDTD 1453
AI+ ++ ++W A+V+YGDTD
Sbjct: 1216 AIALIHSVKRWGAEVVYGDTD 1236
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 42/164 (25%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGG-----KVNEVPVIRVYGSTPAGQKTCLHIHR 65
F V + +DHY A P G D + S G K +VP+IRV+G+T GQK L R
Sbjct: 4 FRVLLNCVDHYQATPT-GLDPQFPSDDSGPDVKSKSLKVPIIRVFGATETGQKGGLGSRR 62
Query: 66 ALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGG 125
Y + L +H L G
Sbjct: 63 R---------------------YFFKVYLL---------------NPLHMTRLADLLMQG 86
Query: 126 AVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
AV + LQP+ESH+ F+ Q++ DYNL+G +++ SK+KFR PVP
Sbjct: 87 AVMKRVLQPYESHLQFVPQWMCDYNLHGCDYINCSKVKFRSPVP 130
>gi|326676933|ref|XP_002665692.2| PREDICTED: DNA polymerase zeta catalytic subunit [Danio rerio]
Length = 1615
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/553 (41%), Positives = 328/553 (59%), Gaps = 49/553 (8%)
Query: 926 SQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVV 984
SQI GP S +S Q+ + + LTL+S+E+ A +R +L PDP +D I +
Sbjct: 748 SQIEGPSFCNSYGFKVSMQNLQEAKALHEVQHLTLMSMELHARTRRNLEPDPEFDPICAL 807
Query: 985 ALAFEND------SDHAVEIYVLL---YCKSESHQRSLV------GIPDCKVFVCSKEIH 1029
+D +E +++ C S RS G+ V E
Sbjct: 808 FYCLSSDVLLHDSGTTRIEGAIVIDKESCTSAQASRSSTPFLFRCGVTGLPVTYTCDEKE 867
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSE 1089
LF I+ +DPDIL+G+++Q S G+L +RA+ LG+ L +SR P GDS+
Sbjct: 868 LFEEVSNIIRKYDPDILVGYEVQMHSWGYLLQRASTLGVNLCQQLSRVP-------GDSQ 920
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
++ + E +DE+G + +H+ GRI+LN+WR+M+ E LN
Sbjct: 921 ------QNHFIPE--------------KDEYGAETMTEIHITGRIILNIWRIMKTEAALN 960
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
YT E VA +L ++ P R L+ WF + R++ +++ V R ++++ Q D+I
Sbjct: 961 NYTFENVAFHLLHQRYPLYSHRTLSDWFDTH--LHRWKVMDHYVSRVCGTVQLLQQQDII 1018
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
RTSELARVFGI F+ VL+RGSQYRVESM+LR+A NY+ ++P Q A Q A +C+PL
Sbjct: 1019 GRTSELARVFGIQFYHVLTRGSQYRVESMMLRVAKPMNYIPVTPSTQQRAQQRAAQCIPL 1078
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFRPDL 1326
VMEPES FY++ V+VLDFQSLYPS++IAYN C+ TCLG I E G +S R
Sbjct: 1079 VMEPESRFYSNSVIVLDFQSLYPSIVIAYNYCYSTCLGHIENLGTYDEFKFGCASLRVPP 1138
Query: 1327 HVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRI 1386
+L L++++ + PNGV +V VR+GVLPR+LEEIL TRIMVKQ++K + + L R+
Sbjct: 1139 DLLYQLRNDITVSPNGVAFVKSSVRRGVLPRMLEEILKTRIMVKQSMKAYR-NDKALSRL 1197
Query: 1387 FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAK 1446
+ARQL LKLIANVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN+ +KW A+
Sbjct: 1198 LDARQLGLKLIANVTFGYTSANFSGRMPCVEVGDSIVHKARETLERAIKMVNDTKKWGAR 1257
Query: 1447 VIYGDTDRYTVCI 1459
V+YGDTD V +
Sbjct: 1258 VVYGDTDSMFVLL 1270
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 109/187 (58%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YM+ PI D+CYS + V +VPV+R++G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMSSPIRELDVCYSEFRESDVKKVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLV--------- 119
+YVP QE D Y+ ++ ++++AL + G+ S QH+ + LV
Sbjct: 61 IYVPYDG----FGQEADRYLRQVAYSIDRALNISMGNPSSNVQHIFKVVLVTGMPFYGYH 116
Query: 120 -RAK--------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
R K + GAV +KS QPHE+HIPFLLQ +DYNLYGM +
Sbjct: 117 MREKSFMKIFLYNPQMVKRVSELLQAGAVMNKSFQPHEAHIPFLLQLFIDYNLYGMNMIS 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|402221982|gb|EJU02050.1| hypothetical protein DACRYDRAFT_107768 [Dacryopinax sp. DJM-731 SS1]
Length = 1592
Score = 408 bits (1049), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/509 (42%), Positives = 303/509 (59%), Gaps = 37/509 (7%)
Query: 950 SAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHA----VEIYVLLYCK 1005
S + +++L++E+ A SRG L PDP D I++VA AF++D+ E+ ++L
Sbjct: 756 STREKQNMSVLAVEIFARSRGRLLPDPAEDEISMVAFAFQDDAGEGGRDTYEVGLILVAN 815
Query: 1006 SESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
+ L + V + E L + I + +DPD+L GWD+Q S +LA RA
Sbjct: 816 PQVDATRLRDLASANVDMVDAESELINKLIDRVLDWDPDVLTGWDVQSSSWSYLAGRAKQ 875
Query: 1066 LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
G+ L + ISR S S G +D W TH
Sbjct: 876 YGVDLSDQISRV---------MSPPSRNG----------------------QDRWSLTHT 904
Query: 1126 SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
S V GR V+NVWR +R E+ L YT E VA VL+R++P LT+WF S
Sbjct: 905 STFRVSGRHVINVWRHLRKELTLTSYTFENVAFQVLKRRMPLYLASTLTQWFHSPVPLHT 964
Query: 1186 YRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHT 1245
+ ++Y++ R +EI+++ ++I +T+E ARVFG++FFSVL RGSQY VES + R+A
Sbjct: 965 AQLIDYLLERTVTVIEILDETELITKTAEFARVFGVEFFSVLERGSQYMVESFMFRIAKP 1024
Query: 1246 QNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
+N++ ISP QV Q A EC+PL+MEP+S Y P+VVLDFQSLYPS+MIAYN C+ TC
Sbjct: 1025 ENFVLISPSKEQVGQQNAAECVPLIMEPQSACYKGPLVVLDFQSLYPSIMIAYNYCYSTC 1084
Query: 1306 LGKILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILS 1364
LG++ K ++ GV+ VL LKD++ I NG+M+V VR+ +L ++L E+L
Sbjct: 1085 LGRVRNFKGKSKFGVTDLSIPPGVLELLKDDITISANGMMFVKDHVRRSLLSKMLSELLD 1144
Query: 1365 TRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
TR+MVKQ +K A + L R+ NARQL+LK IANVTYGYT+A +SGRMP E+AD+IVQ
Sbjct: 1145 TRVMVKQGMKT-AKGDKSLLRLLNARQLSLKYIANVTYGYTSASYSGRMPAVEIADAIVQ 1203
Query: 1425 CGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
GR TLEKA+ +N KW AKV+YGDTD
Sbjct: 1204 SGRETLEKAVHLINSTAKWGAKVVYGDTD 1232
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 35/196 (17%)
Query: 7 DSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
D +I VRI ++D+ P P D S +N+VPV+ V+G T AGQK C+HIH
Sbjct: 3 DESILKVRITNVDYSQQVPGP-LDRTESIF--ATLNKVPVLNVFGHTSAGQKACVHIHNV 59
Query: 67 LPYLYVPC------ADIPVQLRQEDDGYMHAISLALEK-------------ALKVKGSAG 107
PYLY+ + + + HA++L L + L VKG
Sbjct: 60 FPYLYIEYKGELDPGSVNKFINRLGRKLNHALTLVLRRNPYVQNTPQHIVAILPVKGVHF 119
Query: 108 SKRQH---------VHECSLVRAKK----GGAVFDKSLQPHESHIPFLLQFLVDYNLYGM 154
H + L+R + GA+ +K+ Q +ESH+ + LQF+ D+NLYG
Sbjct: 120 YGFHHRRSIFLKIMFSDPRLIRKVQLLLESGAICEKAWQTYESHVDYKLQFMCDFNLYGC 179
Query: 155 GHLHLSKLKFRHPVPD 170
L ++ +FR P+P+
Sbjct: 180 NWLEVADCRFREPLPE 195
>gi|440633310|gb|ELR03229.1| hypothetical protein GMDG_01212 [Geomyces destructans 20631-21]
Length = 1742
Score = 408 bits (1049), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/545 (41%), Positives = 327/545 (60%), Gaps = 52/545 (9%)
Query: 926 SQISGPDGRSKPTPLSQIGFQ--DPASAGA----GEQLTLLSIEVQAESRGDLRPDPRYD 979
SQI GP T ++ GFQ P + + ++++S+EV +RG+L P+P+ D
Sbjct: 862 SQIEGP------TQTNKHGFQYTQPHNTSTLQNNAQYMSVMSLEVHINTRGNLAPNPQED 915
Query: 980 SINVVALAFENDSDHAVEI------YVLLYCKSESHQ--RSLVGIPDCKVFVCSKEIHLF 1031
I V + DH + + + SE+ Q R++ VF S E+ L
Sbjct: 916 EIQCVFWNLQLGEDHPDNLGTGGVSHGGIVALSENGQTARNIAKQTPIHVFEESSELDLL 975
Query: 1032 SHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEI 1090
++ + + DPDIL G+++ S G+L ERA L ++SR S+ G SE
Sbjct: 976 VRIVEFVRANDPDILTGYEVHNCSWGYLVERAKLKYEYDLCEELSRMHTHSR---GHSE- 1031
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
KD+ D+WG H S + V GR ++N+WR MR E+ L
Sbjct: 1032 ---------------------KDS---DKWGSRHTSAISVTGRHMINIWRAMRNELNLLQ 1067
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
YT+E V +L R+IP +R LT W+ SG + +EY + R +LNL I++Q ++I
Sbjct: 1068 YTMENVVFHLLHRRIPHYAWRDLTMWYTSGKFADLAKVIEYYLCRVQLNLAILDQSELIT 1127
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSE AR+ G+DFFSVLSRGSQ++VES++ R+A +N++ +SP QV +Q A+ECLPLV
Sbjct: 1128 RTSEQARLLGVDFFSVLSRGSQFKVESLMFRIAKPENFVLVSPSRKQVGAQNALECLPLV 1187
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT--LGVSSFRPDLHV 1328
MEP+S FY P++VLDFQSLYPS+MIAYN C+ T +G+I+ + T +G + ++ +
Sbjct: 1188 MEPQSAFYTSPLLVLDFQSLYPSVMIAYNYCYSTFMGRIVNWRGGTGKMGFTEYQRQDRL 1247
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L LKD + I PNG+MY P++RK +L ++L EIL TR+MVK + K + + ++ N
Sbjct: 1248 LELLKDFINISPNGMMYTKPEIRKSLLAKMLGEILETRVMVKSGM-KFDVNDKTTQKLLN 1306
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
RQLALKLIANVTYGYT+A FSGRMPC E+ADSIVQ R TLEKAI+ V+ ++W A+V+
Sbjct: 1307 NRQLALKLIANVTYGYTSASFSGRMPCVEIADSIVQTARETLEKAIALVHSVKRWGAEVV 1366
Query: 1449 YGDTD 1453
YGDTD
Sbjct: 1367 YGDTD 1371
Score = 103 bits (256), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 40/198 (20%)
Query: 9 NIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVN---EVPVIRVYGSTPAGQKTCLHIHR 65
++F VR+ IDHY A P + ++N +VPV+RV+G+T GQK C HIH
Sbjct: 2 DLFRVRLNCIDHYQAFPTRFDPQLRRDVAPSEINNEPKVPVVRVFGTTETGQKVCAHIHG 61
Query: 66 ALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA 121
A PY+Y+ D Q+ ++ G Y+H + L+++ AL V +G + + + +LV+
Sbjct: 62 AFPYIYI---DYNGQVTSDEVGAYIHRLHLSIDHALAVSYRRGVYDRRTRFIARITLVKG 118
Query: 122 K------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ GA+ + QP+E+H+ F++Q++ DYNL
Sbjct: 119 VPFYGYHVGYQYYLKIYALDPVVMTRLADLLRQGAIMKRVFQPYEAHLQFIMQWMTDYNL 178
Query: 152 YGMGHLHLSKLKFRHPVP 169
YG G++ ++ FR PVP
Sbjct: 179 YGCGYIDSRQVYFRGPVP 196
>gi|302419923|ref|XP_003007792.1| DNA polymerase zeta catalytic subunit [Verticillium albo-atrum
VaMs.102]
gi|261353443|gb|EEY15871.1| DNA polymerase zeta catalytic subunit [Verticillium albo-atrum
VaMs.102]
Length = 1611
Score = 408 bits (1049), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/544 (40%), Positives = 321/544 (59%), Gaps = 51/544 (9%)
Query: 926 SQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRYD 979
SQI GP TP + GF Q S+G + ++ +S+EV +RG L PDP +D
Sbjct: 750 SQIDGP------TPRNTHGFKYTQKKKSSGIKHEIQYMSTMSLEVHVNTRGHLVPDPEHD 803
Query: 980 SINVVALAFENDSDHAVEIY--------VLLYCKSESHQRSLVGIPDCKVFVCSKEIHLF 1031
+ + + + D +V ++L S + +V +E+ LF
Sbjct: 804 EVQCIFWSIKADGSISVSQEAAGAMIQGIVLLSSDGSLAERVRRQTSVEVVEEMEELDLF 863
Query: 1032 SHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEI 1090
++I+ + DPDIL G+++ G S G+L ERA L ++ SR S G
Sbjct: 864 VRMVEIVRTHDPDILTGYEVHGSSWGYLIERARVKYDYDLCDEFSRMKSNSHGRIGKEN- 922
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
D WG S + V GR ++NVWR MRGE+ L
Sbjct: 923 ---------------------------DRWGFNTTSTIRVTGRHMINVWRAMRGELNLLQ 955
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
Y++E V +L R+IP + LTKW+ SG R + + Y + R +L+++I+ ++I
Sbjct: 956 YSMENVVWHLLHRRIPHYSWSTLTKWYKSGMHRDMSKLMRYYLSRTRLDIDIIEANELIP 1015
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSE AR+ G+DFFSV SRGSQY+VES++ R+A +N++ +SP QV Q A+ECLPLV
Sbjct: 1016 RTSEQARLLGVDFFSVFSRGSQYKVESIMFRIAKPENFILVSPSRQQVGGQNALECLPLV 1075
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVL 1329
MEP+S FY+ PV+VLDFQSLYPS+MIAYNLC+ T LG+I + N +G + ++ +L
Sbjct: 1076 MEPQSAFYSSPVLVLDFQSLYPSVMIAYNLCYSTFLGRITNWRGMNKMGFTEYKRHQRLL 1135
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
LKD + I PNG+M+ P++RK +L ++L EIL TR+MVK +K+ + L ++ N
Sbjct: 1136 ELLKDHINITPNGMMFAKPEIRKSLLAKMLGEILETRVMVKSGMKQ-DKDDRSLQQLLNN 1194
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIY 1449
RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ E+W A+V+Y
Sbjct: 1195 RQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSQERWNAEVVY 1254
Query: 1450 GDTD 1453
GDTD
Sbjct: 1255 GDTD 1258
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 95/200 (47%), Gaps = 44/200 (22%)
Query: 9 NIFSVRIVSIDHYMAP-----PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
++F VR+ +DHY P D+ S Q K +VP++R +GST GQK C HI
Sbjct: 2 DLFRVRLNCLDHYQGTSTRFDPQLRNDVHPS--QAAKGPKVPIVRAFGSTETGQKVCAHI 59
Query: 64 HRALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLV 119
H A PY+YV + L Q++ G Y++ + L+++ AL V + + V +LV
Sbjct: 60 HGAFPYMYVEYSG---SLEQDEVGAYIYRLHLSIDHALAVSYRRDQYSRNAKFVARITLV 116
Query: 120 RAK------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDY 149
+ + G + + QP+E+H+ +LLQF+ D+
Sbjct: 117 KGIPFYGFHVGYRFFLKIYMFNPIVMTRLADLFQQGVIMKRKFQPYEAHLQYLLQFMTDF 176
Query: 150 NLYGMGHLHLSKLKFRHPVP 169
NLYG G L S + FR PVP
Sbjct: 177 NLYGCGFLDASTVHFRAPVP 196
>gi|340519636|gb|EGR49874.1| zeta catalytic subunit of dna polymerase [Trichoderma reesei QM6a]
Length = 1596
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 247/649 (38%), Positives = 359/649 (55%), Gaps = 77/649 (11%)
Query: 837 PFSP---PSVDSVHKWLLHD-DKGASGDMD-----KASVEHSSLKGSDIRPVLEEMHQEA 887
PF P P+ +S W+ HD D S + D + EH S +G +I + A
Sbjct: 643 PFLPSFDPTGNSAPAWMSHDSDTSLSREADMWQNEQRLKEHCSWRGWEIVGFPPSYDEVA 702
Query: 888 DEMISTEPTPDLNGVTAIMHNEGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGFQD 947
M+ + A+P L SQI GP R+K + +
Sbjct: 703 RWMVQNA-------------TDMKRAKPRLIRSWL---SQIDGPTPRTKHN--FKYSQRQ 744
Query: 948 PASA--GAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND-------------S 992
P+SA + ++ +S+E+ +RG+ P+P D I + +++D S
Sbjct: 745 PSSAIPHEAQYMSTMSLEIHVNTRGNFVPNPEEDEIQCIFWHWKDDGATSSATPEMSGSS 804
Query: 993 DHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQ 1052
V + + +E RS+V PD +V S E+ L + ++I+ +DPDIL G+++
Sbjct: 805 GSGVLVQSVDSILAE-QIRSVV--PD-EVAEESSELDLLNRMVEIVRFYDPDILTGYEVH 860
Query: 1053 GGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLA 1111
G S G+L ERA L ++ SR +S G
Sbjct: 861 GSSWGYLIERARLKYDYDLCSEFSRMKTQSNGRFGKEN---------------------- 898
Query: 1112 KDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR 1171
D+WG S + V GR ++N+WR MRGEV L YT+E V +L R+IP P+R
Sbjct: 899 ------DQWGFNTTSSIRVTGRHMINIWRAMRGEVNLLQYTMENVVWHLLHRRIPHYPWR 952
Query: 1172 VLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGS 1231
LT W SG + R + Y R +L+LEI+ ++I+RTSE AR+ G+DFFSV SRGS
Sbjct: 953 CLTSWHRSGKPQDVVRLLRYYRTRTRLDLEILESNELISRTSEQARLLGVDFFSVFSRGS 1012
Query: 1232 QYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLY 1291
Q++VES++ R+A +N++ +SP QV Q A+ECLPLVMEP+S FY+ P+VVLDFQSLY
Sbjct: 1013 QFKVESIMFRIAKPENFMLVSPSRKQVGQQNALECLPLVMEPQSAFYSSPLVVLDFQSLY 1072
Query: 1292 PSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKV 1350
PS+MIAYN C+ T LG+I + ++ +G + +R +L L + + PNG+MYV +V
Sbjct: 1073 PSIMIAYNYCYSTFLGRITDWRGKSKMGFAEYRRQDGLLSLLAKHINVAPNGMMYVKAEV 1132
Query: 1351 RKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFS 1410
RK +L ++L EIL TRIMVK +K+ + L R+ N RQLALKL+ANVTYGYT+A FS
Sbjct: 1133 RKSLLAKMLTEILETRIMVKSGMKQ-DRDDKTLQRLLNNRQLALKLLANVTYGYTSASFS 1191
Query: 1411 GRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
GRMPC+E+ADSIVQ GR TLE+A ++++ E+W A+V+YGDTD V +
Sbjct: 1192 GRMPCSEIADSIVQTGRETLERATAYIHSVERWGAEVVYGDTDSLFVYL 1240
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 39/196 (19%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVN--EVPVIRVYGSTPAGQKTCLHIHRAL 67
+F VR+ IDHY A P + LQ VN VPVIR++GST GQK C H+H
Sbjct: 3 LFRVRLNCIDHYQALPSRHDPQLRNDLQAPLVNATRVPVIRIFGSTEFGQKVCAHVHGVF 62
Query: 68 PYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLVRAK- 122
PYLYV + L Q+ G +++ + L+++ AL + + G K + V +LV+
Sbjct: 63 PYLYV---EYDGDLNQDAVGAFIYRLHLSIDHALAISYRRDQDGDKAKFVARITLVKGVP 119
Query: 123 -----------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYG 153
+ G + + QP+E+H+ +LLQF+VDYNLYG
Sbjct: 120 FYGYAVGYKPFLKIYMFNPMVMTRLADLLQQGVILKRKFQPYEAHLQYLLQFMVDYNLYG 179
Query: 154 MGHLHLSKLKFRHPVP 169
++ S+ FR PVP
Sbjct: 180 CDYVESSQTFFRCPVP 195
>gi|426201443|gb|EKV51366.1| hypothetical protein AGABI2DRAFT_182321 [Agaricus bisporus var.
bisporus H97]
Length = 1480
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/568 (39%), Positives = 327/568 (57%), Gaps = 46/568 (8%)
Query: 897 PDLNGVTAIMHNEGHIAEPNACADCLQDISQISGPDGRS----KPTPLSQIGFQDPASAG 952
P + + ++GH+ + + +++I GP + K +P++ + A++
Sbjct: 569 PSRKVIKNWLQHQGHLKQ-EIFIHLIFALTKIDGPTQFNIYGFKGSPIAHVY----ATSR 623
Query: 953 AGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+ + +T+LS+EV A + G P+P D I + F+ V V+ + + R
Sbjct: 624 SKQSMTILSVEVMAPTHGKNVPNPESDPICIAVYGFQVAGTEDVHTGVIAIQNIQLNPRR 683
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I D + + E+ L + I+ DPDIL GW++Q S G+L RA H +
Sbjct: 684 ---IRDFHLEIVDTELDLLNRLSDIVAELDPDILTGWEVQQASWGYLWLRAKHYDFDFQD 740
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+SR P P+ A S D W S + V G
Sbjct: 741 FLSRAP------------------------PLKAGS--------NDRWDGQTTSNIKVAG 768
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R VLNVWR+MR E+ L YT+ VA V+R+++P F L++W+ S + Y+
Sbjct: 769 RHVLNVWRIMRSELALTSYTLSNVAFHVMRQRVPFYSFATLSRWYDSTGPSHMVALMHYL 828
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ R L+I+ +++ +T+E AR+FG+DF SV+SRGSQ++VES + R+A ++N++ +S
Sbjct: 829 IQRNCATLQILEATELVTKTAEFARIFGVDFHSVISRGSQFKVESFMFRIAKSENFVLLS 888
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P V Q A EC+PL+MEP S FY P+VVLDFQSLYPS+MIAYN C+ TCLG+I P
Sbjct: 889 PSKSDVGLQNAAECMPLIMEPMSAFYTSPLVVLDFQSLYPSVMIAYNYCYSTCLGRIKPF 948
Query: 1313 KEN-TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ N GV++ +L L++ + + PNG+MYV VRKG+L R+L E+L+TR+MVKQ
Sbjct: 949 QGNYKFGVTNLDLGPGILDALQEHITVAPNGIMYVKSNVRKGLLGRMLVELLNTRVMVKQ 1008
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
A+K A S + L R+ +ARQLALK IANVTYGYT+A +SGRMP E+ADSIVQ GR TLE
Sbjct: 1009 ALKS-AKSDKALARVLHARQLALKYIANVTYGYTSATYSGRMPAVEIADSIVQTGRETLE 1067
Query: 1432 KAISFVNENEKWKAKVIYGDTDRYTVCI 1459
KAI F+N +EKW A+V+YGDTD V +
Sbjct: 1068 KAIDFINGSEKWGARVVYGDTDSLFVYL 1095
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 49/192 (25%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSV+I ID+ ++PP P L VP++R++G + G +TCLH+H+ PY
Sbjct: 1 MFSVQIYQIDYVLSPPGP--------LDRSHYPRVPILRIFGQSSVGLRTCLHVHQVYPY 52
Query: 70 LYVPC-ADIPVQ-----LRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKK 123
Y+ D+ ++ +R+ HAI+L+L+ + +K Q+V LV+ K
Sbjct: 53 CYIEYQGDLDLRHVKQYVRKFKKSLNHAIALSLK-----RDPNSTKSQYVCAVVLVKGVK 107
Query: 124 ------------------------------GGAVFDKSLQPHESHIPFLLQFLVDYNLYG 153
G+V + +ESH+ F LQF+ D+ LYG
Sbjct: 108 FYGFHSQYSPFLKIILLDPRLMNRVATILQSGSVMSQRFPVYESHLSFTLQFMCDFGLYG 167
Query: 154 MGHLHLSKLKFR 165
G + +SK R
Sbjct: 168 CGSVGISKAYRR 179
>gi|302505098|ref|XP_003014770.1| hypothetical protein ARB_07331 [Arthroderma benhamiae CBS 112371]
gi|291178076|gb|EFE33867.1| hypothetical protein ARB_07331 [Arthroderma benhamiae CBS 112371]
Length = 1660
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/501 (43%), Positives = 310/501 (61%), Gaps = 36/501 (7%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRS--LV 1014
++++S+EV +RG L P+P D + V + ++ + V+L SE++ S L
Sbjct: 804 MSVMSLEVHVNTRGTLAPNPEEDEVACVFWSVISEEEGRHRGVVVL---SETYGLSSKLK 860
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLND 1073
P + E+ L + + I+ +DPDIL G+++ GS G+L ERA L ++
Sbjct: 861 PEPGIEFQEDMSELDLMNRIVGIVRYYDPDILTGYEVHNGSWGYLIERARKGYDYDLCDE 920
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
SR +S IS D WG H S + V GR
Sbjct: 921 FSRVKSQSH-----GRISRET-----------------------DRWGFNHTSTIRVTGR 952
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
++N+WR MRGE+ L YT+E VA +L ++IP PF LT+WF S R + ++Y
Sbjct: 953 HMINIWRAMRGELNLLQYTMENVAFHLLHKRIPHYPFEDLTRWFKSDRPRDVAKTIQYFS 1012
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
R LNLEI++ ++I+RTSE AR+ GIDF+SV SRGSQ++VES++ R+A +N++ ISP
Sbjct: 1013 SRVDLNLEILDANELISRTSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISP 1072
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG+I +
Sbjct: 1073 SRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIFNWR 1132
Query: 1314 -ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
N +G++ + + +L LKD++ I PNG++YV +VRK +L ++L EIL TR+MVK
Sbjct: 1133 GRNKMGITDYEREPGLLGLLKDKINIAPNGIIYVKQEVRKSLLAKMLTEILETRVMVKNG 1192
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K+ + L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ R TLEK
Sbjct: 1193 MKE-DKDDRPLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEK 1251
Query: 1433 AISFVNENEKWKAKVIYGDTD 1453
AI+ ++ ++W A+V+YGDTD
Sbjct: 1252 AIALIHSVKRWGAEVVYGDTD 1272
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 23/179 (12%)
Query: 11 FSVRIVSIDHYMAPPI---PGY--DICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH--I 63
F V + +DHY A P P + D L+ G + +VPVIRV+G+T GQK+ H +
Sbjct: 4 FRVLLNCVDHYQATPTELDPQFTSDNNDPQLRSGSI-KVPVIRVFGATETGQKSAKHRIV 62
Query: 64 HRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQH----------- 112
+ A+ L+ D + L + H+ + +L VKG
Sbjct: 63 NAAIRSLHA-SIDHALALSYRRNPSDHSAAFVAYISL-VKGIPFYGYYVGYRYYFKVYLL 120
Query: 113 --VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
+H L GAV ++LQP+ESH+ F+ Q++ DY+L+G +++ SK+KFR PVP
Sbjct: 121 NPLHMTRLADLLLQGAVMKRALQPYESHLQFIPQWMCDYSLHGCAYINCSKVKFRPPVP 179
>gi|307187392|gb|EFN72515.1| DNA polymerase zeta catalytic subunit [Camponotus floridanus]
Length = 2051
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/532 (41%), Positives = 310/532 (58%), Gaps = 42/532 (7%)
Query: 940 LSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND----SDHA 995
+S Q+ + A + LTLLS+EV +R DL PDP+YDSI + A ND ++
Sbjct: 1195 VSNENLQNVRAITAHQYLTLLSLEVHTVTREDLLPDPQYDSIAALFYAIYNDIPMNTNEQ 1254
Query: 996 VEIYVLLYCKSESHQRSLVGIPD----CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDI 1051
+E + + S S L I C + + E +F+ FIK++ +PDIL+GW++
Sbjct: 1255 IE-HGAIIVNSNSISPRLNKIHSASVMCPILYVATEQDMFNSFIKLIEQHNPDILLGWEV 1313
Query: 1052 QGGSLGFLAERAAHLGIGLLN-DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLL 1110
+ S ++ +RA +L + IS+ P + D+ ISE
Sbjct: 1314 EALSWSYIFQRALYLNLNNFPIRISKVPYMQVFSKSDAHISE------------------ 1355
Query: 1111 AKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPF 1170
KD I S + V GR +L+VWR+MR E L YT E V VL +IP F
Sbjct: 1356 -KDDI----------SEIKVLGRNILDVWRIMRHEAALLTYTFENVMHHVLHERIPCPSF 1404
Query: 1171 RVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRG 1230
+ L+ W+ + R + + + R +++N LD+I RT E AR+FGI F+ V SRG
Sbjct: 1405 KTLSTWWKHESMIIKSRVIHHYIIRVVGTFKLLNHLDIIGRTCEHARLFGIQFYEVFSRG 1464
Query: 1231 SQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSL 1290
SQ+RVESM+LRLA NY+ ISP HQ A A ECLPL+MEPES FY DP++VLDFQSL
Sbjct: 1465 SQFRVESMMLRLAKPMNYIPISPSIHQRAKMRAPECLPLIMEPESEFYTDPLIVLDFQSL 1524
Query: 1291 YPSMMIAYNLCFCTCLGKILPSKEN---TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVP 1347
YPSM+IAYN CF TCLG+I + G ++ R + + L+D++ P GV +V
Sbjct: 1525 YPSMIIAYNYCFSTCLGRIEHIGQYGPFEFGAATLRIRKNTVLKLQDKINFSPCGVAFVK 1584
Query: 1348 PKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAA 1407
+VR+G+LPR+L EIL+TR+MVK+++K LHR+ +++QL LKLIANVTYGYT+A
Sbjct: 1585 KEVRQGILPRMLSEILNTRLMVKESMKLHPAENHTLHRVLHSQQLGLKLIANVTYGYTSA 1644
Query: 1408 GFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
FSGRMPC E+ DS+V GR TLE+AI V KW A+V+YGDTD V +
Sbjct: 1645 NFSGRMPCIEIGDSVVSKGRETLERAIKLVESTPKWGARVVYGDTDSLFVLL 1696
Score = 146 bits (369), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 110/187 (58%), Gaps = 36/187 (19%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FS+ +V+ID Y A PIP D+ +S +G ++ +VP+IR++GST G+KTCLHIH PY
Sbjct: 1 MFSITLVNIDSYQASPIPELDVTFSEFRGSEIRKVPIIRIFGSTVTGKKTCLHIHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKAL-KVKGSAGSKRQHVHECSLVRA------- 121
+YVPC +++ D Y + ++ +++ AL K GS S QHV++ V
Sbjct: 61 MYVPCT-----IQENTDSYAYQLAASIDSALNKSFGSTLSTNQHVYKIQRVSGIPFYGYH 115
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +++LQP+E+HIP++LQF++DYNLYGM ++
Sbjct: 116 EKEHLFFKIYFYNPAIIKRTADLLQNGAILNQTLQPYEAHIPYILQFMIDYNLYGMNLIN 175
Query: 159 LSKLKFR 165
L+ +K+R
Sbjct: 176 LNNIKYR 182
>gi|358384921|gb|EHK22518.1| hypothetical protein TRIVIDRAFT_191274 [Trichoderma virens Gv29-8]
Length = 1564
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/547 (41%), Positives = 324/547 (59%), Gaps = 54/547 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQ----DPASA--GAGEQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP TP S+ F+ P++A + ++ +S+E+ +RG+ P+P
Sbjct: 705 LSQIDGP------TPKSKYDFKYSQKQPSAAVPHEAQYMSTMSLEIHVNTRGNFVPNPEE 758
Query: 979 DSINVVALAFENDSDHAVEIYVLLYCKSE-----SHQRSLVG-----IPDCKVFVCSKEI 1028
D I + +++D LL S L G +PD +V S E+
Sbjct: 759 DEIQCIFWHWKDDEATGNATNELLGSSKSGILVLSVDDILAGQIRSAVPD-EVVQESSEL 817
Query: 1029 HLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGD 1087
L + ++I+ +DPDIL G+++ GGS G+L ER L N+ SR +SK G
Sbjct: 818 DLLNRMVEIVRFYDPDILTGYEVHGGSWGYLIERGRLKYDYDLCNEFSRMKAQSKGRFGK 877
Query: 1088 SEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVK 1147
D+WG S + V GR ++N+WR MRGEV
Sbjct: 878 ES----------------------------DQWGFNTTSTIRVTGRHMINIWRAMRGEVN 909
Query: 1148 LNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLD 1207
L YT+E V +L R+IP ++ LT W SG + R + Y R +L+LEI+ +
Sbjct: 910 LLQYTMENVVWHLLHRRIPHYSWKSLTSWHRSGRAQDLNRLLRYYRTRTRLDLEILESNE 969
Query: 1208 MINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECL 1267
+I+RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N++ +SP QV Q A+ECL
Sbjct: 970 LISRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGQQNALECL 1029
Query: 1268 PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDL 1326
PLVMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I + ++ +G S ++
Sbjct: 1030 PLVMEPQSAFYSSPLIVLDFQSLYPSVMIAYNYCYSTFLGRITDWRGKSKMGFSEYKRQD 1089
Query: 1327 HVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRI 1386
+L L D + I PNG+MYV +VRK +L ++L EIL TRIMVK +K+ + L ++
Sbjct: 1090 GLLSLLGDHINIAPNGMMYVKAEVRKSLLAKMLTEILETRIMVKSGMKQ-DQDDKTLQQL 1148
Query: 1387 FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAK 1446
N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+A ++++ E+W A+
Sbjct: 1149 LNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERATAYIHSVERWGAE 1208
Query: 1447 VIYGDTD 1453
V+YGDTD
Sbjct: 1209 VVYGDTD 1215
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 95/200 (47%), Gaps = 44/200 (22%)
Query: 10 IFSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
+F VR+ IDHY A PP+ D+ VPVIR++GST GQK C H+
Sbjct: 3 LFRVRLNCIDHYQALPSRHDPPLRN-DVQIQGPPPLNATRVPVIRIFGSTEFGQKVCAHV 61
Query: 64 HRALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLV 119
H PYLYV + L Q+ G +++ + L+++ AL + + G K + V +LV
Sbjct: 62 HGVFPYLYV---EYDGNLNQDAVGAFIYRLHLSIDHALSISYRRDQYGDKAKFVARITLV 118
Query: 120 RA------------------------------KKGGAVFDKSLQPHESHIPFLLQFLVDY 149
+ + G + + QP+E+H+ +LLQF++DY
Sbjct: 119 KGIPFYGYSVGYKSFLKIYMFNPLVMTRLADLLQQGVIMKRKFQPYEAHLQYLLQFMIDY 178
Query: 150 NLYGMGHLHLSKLKFRHPVP 169
NLYG ++ S+ FR PVP
Sbjct: 179 NLYGCDYVESSQTYFRSPVP 198
>gi|358393560|gb|EHK42961.1| hypothetical protein TRIATDRAFT_294114 [Trichoderma atroviride IMI
206040]
Length = 1556
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/534 (41%), Positives = 321/534 (60%), Gaps = 51/534 (9%)
Query: 925 ISQISGPDGRSK-PTPLSQIGFQDPASA--GAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
+SQI GP + K SQ + P+SA + ++++S+EV +RG+ P+P D +
Sbjct: 707 LSQIDGPTQKDKYDFKYSQ---KQPSSAVPHEAQYMSIMSLEVHVHTRGNFVPNPEEDEV 763
Query: 982 NVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSF 1041
+ +++D A + R + D +V S E+ L + I+I+ +
Sbjct: 764 QCIFWHWKDDEAIATD-------------RIRHAVSD-EVVHESSELDLLNRMIEIVRVY 809
Query: 1042 DPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
DPD+L G+++ G S G+L ERA L N+ SR +SK G
Sbjct: 810 DPDVLTGYEVHGSSWGYLIERARLKYDYDLCNEFSRMKAQSKGRFGKES----------- 858
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
D+WG S + + GR ++N+WR MR EV L YT+E V +
Sbjct: 859 -----------------DQWGFNTTSTIRITGRHMINIWRAMRSEVNLLQYTMENVVWHL 901
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L R+IP +R LT W SG R R + Y R++L+L+I+ ++I+RTSE AR+ G
Sbjct: 902 LHRRIPHYSWRSLTSWLQSGKARDLNRLLRYYRTRSRLDLKILESNELISRTSEQARLLG 961
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
+DFFSV SRGSQ++VES++ R+A +N++ +SP QV Q A+ECLPLVMEP+S FY+
Sbjct: 962 VDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGQQNALECLPLVMEPQSSFYSS 1021
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDELLIP 1339
P+VVLDFQSLYPS+MIAYN C+ T LG+I + ++ +G + ++ +L L+D + I
Sbjct: 1022 PLVVLDFQSLYPSVMIAYNYCYSTFLGRITDWRGKSKMGFTEYKRQDGLLTLLEDHINIA 1081
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIAN 1399
PNG+MYV +VRK +L ++L EIL TRIMVK +K + L ++ N RQLALKL+AN
Sbjct: 1082 PNGMMYVKSEVRKSLLAKMLTEILETRIMVKNGMKT-DQDDKTLQQLLNNRQLALKLLAN 1140
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
VTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+A ++++ E+W A+V+YGDTD
Sbjct: 1141 VTYGYTSASFSGRMPCSEIADSIVQTGRETLERATAYIHSVERWGAEVVYGDTD 1194
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 40/198 (20%)
Query: 9 NIFSVRIVSIDHYMAPPIPGYDICYSSLQGG---KVNEVPVIRVYGSTPAGQKTCLHIHR 65
+ F VR+ IDHY A P + +Q K +VPVIR++GST GQK C H+H
Sbjct: 2 DFFRVRLNCIDHYQALPSRHDPPLRNDVQAPPPLKATKVPVIRIFGSTEFGQKVCAHVHG 61
Query: 66 ALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA 121
PY+YV + L ++ G +++ + L+++ AL + + G K + V +LV+
Sbjct: 62 VFPYMYV---EYDGNLNRDAVGSFVYRLHLSIDHALGISYRQDQNGDKARFVARITLVKG 118
Query: 122 K------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ G + + QP+E+H+ +LLQF++DYNL
Sbjct: 119 TPFYGYSVGYKFFLKIYMFNPAVMTRLADLLQQGVILKRKFQPYEAHLQYLLQFMIDYNL 178
Query: 152 YGMGHLHLSKLKFRHPVP 169
YG + S+ FR PVP
Sbjct: 179 YGCDFVESSQTYFRSPVP 196
>gi|326471536|gb|EGD95545.1| polymerase zeta subunit [Trichophyton tonsurans CBS 112818]
Length = 1694
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/542 (40%), Positives = 317/542 (58%), Gaps = 53/542 (9%)
Query: 932 DGRSKPTPLSQI---------GFQ------DPASAGAGEQLTLLSIEVQAESRGDLRPDP 976
D ++ P+SQI GF+ A ++++S+EV +RG L P+P
Sbjct: 798 DATARDVPVSQIDASTQHNKHGFKYSQRTKSSAVQHEANYMSVMSLEVHVNTRGTLAPNP 857
Query: 977 RYDSINVV---ALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSH 1033
D + V ++ E H V + Y S L P + E+ L +
Sbjct: 858 EEDEVACVFWSVISEEEVRHHGVVVVSETYGLSSK----LKPEPGIEFQEEISELDLMNR 913
Query: 1034 FIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLESKIAAGDSEISE 1092
+ I+ +DPDIL G+++ GS G+L ERA L ++ SR +S G
Sbjct: 914 IVGIVRYYDPDILTGYEVHNGSWGYLIERARKGYDYDLCDEFSRVKSQSHGRIGRET--- 970
Query: 1093 RGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYT 1152
D WG H S + + GR ++N+WR MRGE+ L YT
Sbjct: 971 -------------------------DRWGFNHTSTIRITGRHMINIWRAMRGELNLLQYT 1005
Query: 1153 VEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRT 1212
+E VA +L ++IP PF LT+WF S R + ++Y R LNLEI++ ++I+RT
Sbjct: 1006 MENVAFHLLHKRIPHYPFEDLTRWFKSDRPRDVAKTIQYFSSRVDLNLEILDANELISRT 1065
Query: 1213 SELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVME 1272
SE AR+ GIDF+SV SRGSQ++VES++ R+A +N++ ISP QV Q A+ECLPLVME
Sbjct: 1066 SEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGQQNALECLPLVME 1125
Query: 1273 PESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRD 1331
P+S FY P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G++ + + +L
Sbjct: 1126 PQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNKMGITDYEREPGLLGL 1185
Query: 1332 LKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQ 1391
LKD++ I PNG++Y ++RK +L ++L EIL TR+MVK +K+ + L R+ N RQ
Sbjct: 1186 LKDQINIAPNGIIYAKQEIRKSLLAKMLTEILETRVMVKNGMKE-DKDDRPLQRLLNNRQ 1244
Query: 1392 LALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGD 1451
LALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ R TLEKAI+ ++ ++W A+V+YGD
Sbjct: 1245 LALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEKAIALIHSVKRWGAEVVYGD 1304
Query: 1452 TD 1453
TD
Sbjct: 1305 TD 1306
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 11 FSVRIVSIDHYMAPPI---PGY--DICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
F V + +DHY P P + D L+ G + +VPVIRV+G+T GQK C HIH
Sbjct: 4 FRVLLNYVDHYQVTPTELDPQFTSDNNGPQLRSGSI-KVPVIRVFGATETGQKVCAHIHG 62
Query: 66 ALPYLYV 72
ALPYLY+
Sbjct: 63 ALPYLYL 69
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 35/45 (77%)
Query: 125 GAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
GAV ++LQP+ESH+ F+ Q++ DY+L+G ++ SK+KFR PVP
Sbjct: 170 GAVMKRALQPYESHLQFIPQWMCDYSLHGCTFINCSKVKFRPPVP 214
>gi|239613873|gb|EEQ90860.1| polymerase zeta subunit [Ajellomyces dermatitidis ER-3]
Length = 1699
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/545 (40%), Positives = 318/545 (58%), Gaps = 51/545 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP +++ GF+ + ++++S+EV +RG L P+P
Sbjct: 818 LSQIEGPTQKNRH------GFKYSQKKPTRNVRQEAQYMSVMSLEVHVNTRGILVPNPEE 871
Query: 979 DSINVVALAFEN--------DSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHL 1030
D I+ + ++ D + ++ ++ES + + + E+ L
Sbjct: 872 DEISCIIWCVQDGETGIDDDDDSGGMTAGIIALAENESLAAKISPTMVSEFDEETTELDL 931
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLESKIAAGDSE 1089
+ + ++ DPDIL G+++ S G+L ERA + L +++SR S G
Sbjct: 932 LTKLVDVVRQRDPDILTGYEVHNSSWGYLIERARYKFDYDLCDELSRVKTSSHGRIGKEN 991
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
D WG H S + V GR ++N+WR MRGE+ L
Sbjct: 992 ----------------------------DRWGFNHTSSIRVTGRHMINIWRAMRGELNLL 1023
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
YT+E V +L ++IP F+ LTKWF S R + + Y V R +LNL+I+ +++
Sbjct: 1024 QYTMENVVFHLLHQRIPHYAFQDLTKWFTSKKPRDIAKVINYFVSRVQLNLKIIEANELV 1083
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
+RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N++ ISPG QV Q A+ECLPL
Sbjct: 1084 SRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENFILISPGRTQVGQQNALECLPL 1143
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHV 1328
VMEP+S FY P++VLDFQSLYPS+MIAYN C+ TCLG+++ + +N LG FR +
Sbjct: 1144 VMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRVVNWRGQNKLGFIDFRRPAGI 1203
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L KD++ I PNG++Y ++R+ +L ++L EIL TR+MVK +K + L R+ N
Sbjct: 1204 LELFKDQVNIAPNGIIYAKQEIRRSLLAKMLIEILETRVMVKGGMKA-EKDDKYLQRLLN 1262
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ R TLEKAI+ ++ E+W A+V+
Sbjct: 1263 NRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETLEKAIALIHSVERWGAEVV 1322
Query: 1449 YGDTD 1453
YGDTD
Sbjct: 1323 YGDTD 1327
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 94/199 (47%), Gaps = 46/199 (23%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F V + +DHY A P +P + S +VPVIRV+G+T GQK C HIH
Sbjct: 4 FQVLLNCVDHYQAIQTSFDPQLP---VNASPAPKSVRPKVPVIRVFGATETGQKVCAHIH 60
Query: 65 RALPYLYVPCADIPVQLR-QEDDGYMHAISLALEKALKV---KGSAGSKRQHVHECSLVR 120
A PYLY+ + L +E + + + L+++ AL V + + K +V +LV+
Sbjct: 61 GAFPYLYI---EYQGSLNPKEVNTAIRTLHLSIDHALAVSYRRNAYEKKTAYVAHITLVK 117
Query: 121 AK------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYN 150
+ GAV + LQP+ESH+ +L Q++ DYN
Sbjct: 118 GVPFYGYHVGYRFFFKIYLFNPMHMTRLADLLRQGAVMKRVLQPYESHLQYLSQWMCDYN 177
Query: 151 LYGMGHLHLSKLKFRHPVP 169
LYG +L SK+ FR P+P
Sbjct: 178 LYGCAYLKSSKVTFRAPIP 196
>gi|327349945|gb|EGE78802.1| DNA polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 1699
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/545 (40%), Positives = 318/545 (58%), Gaps = 51/545 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP +++ GF+ + ++++S+EV +RG L P+P
Sbjct: 818 LSQIEGPTQKNRH------GFKYSQKKPTRNVRQEAQYMSVMSLEVHVNTRGILVPNPEE 871
Query: 979 DSINVVALAFEN--------DSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHL 1030
D I+ + ++ D + ++ ++ES + + + E+ L
Sbjct: 872 DEISCIIWCVQDGETGIDDDDDSGGMTAGIIALAENESLAAKISPTMVSEFDEETTELDL 931
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLESKIAAGDSE 1089
+ + ++ DPDIL G+++ S G+L ERA + L +++SR S G
Sbjct: 932 LTKLVDVVRQRDPDILTGYEVHNSSWGYLIERARYKFDYDLCDELSRVKTSSHGRIGKEN 991
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
D WG H S + V GR ++N+WR MRGE+ L
Sbjct: 992 ----------------------------DRWGFNHTSSIRVTGRHMINIWRAMRGELNLL 1023
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
YT+E V +L ++IP F+ LTKWF S R + + Y V R +LNL+I+ +++
Sbjct: 1024 QYTMENVVFHLLHQRIPHYAFQDLTKWFTSKKPRDIAKVINYFVSRVQLNLKIIEANELV 1083
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
+RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N++ ISPG QV Q A+ECLPL
Sbjct: 1084 SRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENFILISPGRTQVGQQNALECLPL 1143
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHV 1328
VMEP+S FY P++VLDFQSLYPS+MIAYN C+ TCLG+++ + +N LG FR +
Sbjct: 1144 VMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRVVNWRGQNKLGFIDFRRPAGI 1203
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L KD++ I PNG++Y ++R+ +L ++L EIL TR+MVK +K + L R+ N
Sbjct: 1204 LELFKDQVNIAPNGIIYAKQEIRRSLLAKMLIEILETRVMVKGGMKA-EKDDKYLQRLLN 1262
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ R TLEKAI+ ++ E+W A+V+
Sbjct: 1263 NRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETLEKAIALIHSVERWGAEVV 1322
Query: 1449 YGDTD 1453
YGDTD
Sbjct: 1323 YGDTD 1327
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 46/199 (23%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F V + +DHY A P +P + +VPVIRV+G+T GQK C HIH
Sbjct: 4 FQVLLNCVDHYQAIQTSFDPQLP---VNAGPAPKSVRPKVPVIRVFGATETGQKVCAHIH 60
Query: 65 RALPYLYVPCADIPVQLR-QEDDGYMHAISLALEKALKV---KGSAGSKRQHVHECSLVR 120
A PYLY+ + L +E + + + L+++ AL V + + K +V +LV+
Sbjct: 61 GAFPYLYI---EYQGSLNPKEVNTAIRTLHLSIDHALAVSYRRNAYEKKTAYVAHITLVK 117
Query: 121 AK------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYN 150
+ GAV + LQP+ESH+ +L Q++ DYN
Sbjct: 118 GVPFYGYHVGYRFFFKIYLFNPMHMTRLADLLRQGAVMKRVLQPYESHLQYLSQWMCDYN 177
Query: 151 LYGMGHLHLSKLKFRHPVP 169
LYG +L SK+ FR P+P
Sbjct: 178 LYGCAYLKSSKVTFRAPIP 196
>gi|432945567|ref|XP_004083662.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Oryzias
latipes]
Length = 2967
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/553 (41%), Positives = 329/553 (59%), Gaps = 47/553 (8%)
Query: 926 SQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVV 984
SQI GP S +S QD + + LTL+++E+ A +R DL PDP +D I +
Sbjct: 2100 SQIEGPSISNSYGFKVSMQNLQDAKALHEVQHLTLMAMELHARTRRDLEPDPEFDPICAL 2159
Query: 985 ALAFENDS------DHAVEIYVLLYCKSESHQRS-------LV--GIPDCKVFVCSKEIH 1029
F +D+ + +++ E R LV G+ +V S+E
Sbjct: 2160 FYCFSSDAPLPDADSTQLTGAIMVDKDHEPGGRGRRETAPLLVRSGVSGLQVTYASEEKM 2219
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSE 1089
LF + I+ DPDIL+G+++Q S G+L +RAA LG+ L +SR P +SK
Sbjct: 2220 LFQELVGIMRRLDPDILLGYEVQMHSWGYLLQRAAVLGVDLCQQLSRVPGDSK------- 2272
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
+N A AE +DE+G + +H+ GR+ LN+WR+M+ EV LN
Sbjct: 2273 -------ENRFA----AE---------KDEYGADTMTEIHIIGRVTLNLWRVMKSEVALN 2312
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
Y+ E VA VL ++ P R L+ WF R++ V++ V R ++ ++ Q D++
Sbjct: 2313 SYSFENVAFHVLHQRFPLFSHRTLSDWFDHNTNLYRWKMVDHYVSRVCSSMHLLQQNDIV 2372
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
RTSELAR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q A Q A +C+PL
Sbjct: 2373 GRTSELARLFGIQFLHVLTRGSQYRVESMMLRVAKPLNYIPVTPSVQQRAQQRAPQCIPL 2432
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG---KILPSKENTLGVSSFRPDL 1326
VMEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 2433 VMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHQESLGTPDEFKFGCTSLRVPP 2492
Query: 1327 HVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRI 1386
+L L++++ + P+G+ +V VRKGVLPR+LEEIL+TRIMVKQ++K + L ++
Sbjct: 2493 EMLYQLRNDINVSPSGIAFVKSTVRKGVLPRMLEEILNTRIMVKQSMKTYK-QDKALMKL 2551
Query: 1387 FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAK 1446
+ARQL LKLIANVT+GYT+A +SGRMP E+ DSIV R TLE+AI VN+ +KW A+
Sbjct: 2552 LDARQLGLKLIANVTFGYTSANYSGRMPSVEVGDSIVHKARETLERAIKQVNDTKKWGAR 2611
Query: 1447 VIYGDTDRYTVCI 1459
V+YGDTD V +
Sbjct: 2612 VVYGDTDSMFVLL 2624
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 107/191 (56%), Gaps = 41/191 (21%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+ SVRIV+ D+Y+A PI D+ YSS + V VPV+R++G+TPAGQKTCLH+H PY
Sbjct: 1 MLSVRIVTADYYLASPIKDLDVSYSSFRESDVKRVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVP---CADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLV------ 119
+YVP C P + ++ ++ ++++AL V G+ S QHV + LV
Sbjct: 61 IYVPYDGCGQPP-------ERHLRQVAFSIDRALNVAMGNPASSVQHVFKVVLVSGMPFY 113
Query: 120 --RAK----------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMG 155
AK + GAV +KS QPHE HIP+LLQ +DYNLYGM
Sbjct: 114 GFHAKEKHFMKIYLYNPQMVKRVCELLQSGAVMNKSYQPHEGHIPYLLQLFIDYNLYGMN 173
Query: 156 HLHLSKLKFRH 166
++L+ +KFR
Sbjct: 174 LINLAAVKFRR 184
>gi|261193585|ref|XP_002623198.1| polymerase zeta subunit [Ajellomyces dermatitidis SLH14081]
gi|239588803|gb|EEQ71446.1| polymerase zeta subunit [Ajellomyces dermatitidis SLH14081]
Length = 1699
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/545 (40%), Positives = 318/545 (58%), Gaps = 51/545 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP +++ GF+ + ++++S+EV +RG L P+P
Sbjct: 818 LSQIEGPTQKNRH------GFKYSQKKPTRNVRQEAQYMSVMSLEVHVNTRGILVPNPEE 871
Query: 979 DSINVVALAFEN--------DSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHL 1030
D I+ + ++ D + ++ ++ES + + + E+ L
Sbjct: 872 DEISCIIWCVQDGETGIDDDDDSGGMTAGIIALAENESLAAKISPTMVSEFDEETTELDL 931
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLESKIAAGDSE 1089
+ + ++ DPDIL G+++ S G+L ERA + L +++SR S G
Sbjct: 932 LTKLVDVVRQRDPDILTGYEVHNSSWGYLIERARYKFDYDLCDELSRVKTSSHGRIGKEN 991
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
D WG H S + V GR ++N+WR MRGE+ L
Sbjct: 992 ----------------------------DRWGFNHTSSIRVTGRHMINIWRAMRGELNLL 1023
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
YT+E V +L ++IP F+ LTKWF S R + + Y V R +LNL+I+ +++
Sbjct: 1024 QYTMENVVFHLLHQRIPHYAFQDLTKWFTSKKPRDIAKVINYFVSRVQLNLKIIEANELV 1083
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
+RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N++ ISPG QV Q A+ECLPL
Sbjct: 1084 SRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENFILISPGRTQVGQQNALECLPL 1143
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHV 1328
VMEP+S FY P++VLDFQSLYPS+MIAYN C+ TCLG+++ + +N LG FR +
Sbjct: 1144 VMEPQSDFYTSPLLVLDFQSLYPSVMIAYNYCYSTCLGRVVNWRGQNKLGFIDFRRPAGI 1203
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L KD++ I PNG++Y ++R+ +L ++L EIL TR+MVK +K + L R+ N
Sbjct: 1204 LELFKDQVNIAPNGIIYAKQEIRRSLLAKMLIEILETRVMVKGGMKA-EKDDKYLQRLLN 1262
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ R TLEKAI+ ++ E+W A+V+
Sbjct: 1263 NRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETLEKAIALIHSVERWGAEVV 1322
Query: 1449 YGDTD 1453
YGDTD
Sbjct: 1323 YGDTD 1327
Score = 89.4 bits (220), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 46/199 (23%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F V + +DHY A P +P + +VPVIRV+G+T GQK C HIH
Sbjct: 4 FQVLLNCVDHYQAIQTSFDPQLP---VNAGPAPKSVRPKVPVIRVFGATETGQKVCAHIH 60
Query: 65 RALPYLYVPCADIPVQLR-QEDDGYMHAISLALEKALKV---KGSAGSKRQHVHECSLVR 120
A PYLY+ + L +E + + + L+++ AL V + + K +V +LV+
Sbjct: 61 GAFPYLYI---EYQGSLNPKEVNTAIRTLHLSIDHALAVSYRRNAYEKKTAYVAHITLVK 117
Query: 121 AK------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYN 150
+ GAV + LQP+ESH+ +L Q++ DYN
Sbjct: 118 GVPFYGYHVGYRFFFKIYLFNPMHMTRLADLLRQGAVMKRVLQPYESHLQYLSQWMCDYN 177
Query: 151 LYGMGHLHLSKLKFRHPVP 169
LYG +L SK+ FR P+P
Sbjct: 178 LYGCAYLKSSKVTFRAPIP 196
>gi|406868498|gb|EKD21535.1| DNA polymerase zeta catalytic subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 2719
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/552 (39%), Positives = 327/552 (59%), Gaps = 51/552 (9%)
Query: 924 DISQISGPDGRSKPTPLSQIGF---QDPASAGA---GEQLTLLSIEVQAESRGDLRPDPR 977
++SQI GP ++K GF QD + + ++ +S+EV +RG+ P+P
Sbjct: 867 NLSQIDGPTQKNKH------GFKYTQDQKTTSVKHEAQYMSTMSLEVHINTRGNFVPNPE 920
Query: 978 YDSINVVALAFENDSD--------HAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIH 1029
D + V ++D + + ++ + R + + S E+
Sbjct: 921 EDEVQCVFWCLQSDDEGLLNNCAVDGTHLGAVVLSEDGVVTRKIARQISIDIQEESTELD 980
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDS 1088
L ++I+ ++DPDIL G+++ GGS G+L ERA L ++ SR +S
Sbjct: 981 LMIRMVEIVRNYDPDILTGYEVHGGSWGYLIERARLKYDYNLCDEFSRMKAQS------- 1033
Query: 1089 EISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKL 1148
KD+ D+WG + S + V GR ++N+WR MR E+ L
Sbjct: 1034 ------------------HGRFGKDS---DKWGFNNTSTIRVTGRHMINIWRAMRSELNL 1072
Query: 1149 NMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDM 1208
YT+E VA +L R+IP + LT+W+ +G R + V + R +L+LE+++ ++
Sbjct: 1073 LQYTLENVAFHLLHRRIPHFTWADLTRWYVNGKTRDLAKVVNHYATRVQLDLELLDANEL 1132
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N++ +SP QV Q A+ECLP
Sbjct: 1133 IPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPENFMLVSPSRKQVGGQNALECLP 1192
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLH 1327
LVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG+I+ + ++ +G + ++
Sbjct: 1193 LVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVNWRGKSKMGFAEYQRQQR 1252
Query: 1328 VLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIF 1387
+L LKD + I PNG+MY P++RK +L ++L EIL TR+MVK + K+ + L R+
Sbjct: 1253 LLELLKDHINIAPNGIMYAKPEIRKSLLAKMLGEILETRVMVKSGM-KVDKDDKSLQRLL 1311
Query: 1388 NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKV 1447
N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+ ++ +KW A+V
Sbjct: 1312 NNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIALIHSVKKWGAEV 1371
Query: 1448 IYGDTDRYTVCI 1459
+YGDTD V +
Sbjct: 1372 VYGDTDSIFVYL 1383
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 96/197 (48%), Gaps = 40/197 (20%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+F VR+ ID+Y + P P Q K +VPVIRV+G+T GQK C HIH A
Sbjct: 3 LFRVRLNCIDYYQSTPSKFDPPLRRNIKPSQISKEPKVPVIRVFGATETGQKVCAHIHGA 62
Query: 67 LPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA- 121
PYLYV + L ++D G Y+H + L+++ AL V + + + V +LV+
Sbjct: 63 FPYLYV---EYNGSLIEDDVGAYIHRLHLSIDFALAVSYRRNVSDDNAKFVARITLVKGI 119
Query: 122 -----------------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLY 152
+ G + K QP+E+H+ +LLQ++ DYNLY
Sbjct: 120 PFYGFHVGYRFYLKIYMLNPMVMTRLGDLLRQGIIMKKVFQPYEAHLQYLLQWMADYNLY 179
Query: 153 GMGHLHLSKLKFRHPVP 169
G G++ K+ FR PVP
Sbjct: 180 GCGYIDCGKVTFRGPVP 196
>gi|336383793|gb|EGO24942.1| hypothetical protein SERLADRAFT_361773 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1560
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 307/540 (56%), Gaps = 55/540 (10%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVV 984
I +I GP + G + S + +T+LS+EV A SRGD PD D I V
Sbjct: 694 ILEIEGPTPANPSGARLDAGARSEYSVRESQNMTMLSLEVFAPSRGDRVPDANVDEIVAV 753
Query: 985 ALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCK----------VFVCSKEIHLFSHF 1034
F D +SE++++ +V + + + V V E+ L +
Sbjct: 754 FYTFSIDG------------RSENYEKGMVVVKNERLDPRRLRNFCVEVVPDELELLNKV 801
Query: 1035 IKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERG 1094
I I+ DPDI++GW++Q S G++ R H G + I+R P + D
Sbjct: 802 IDIVIDVDPDIVVGWEVQTASWGYVNSRGRHYGFEIGELIARAPSRNNTGGND------- 854
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
+WG +S V GR V NVWR+M+ E L +YT E
Sbjct: 855 ------------------------QWGLRTSSTFQVIGRHVFNVWRIMQVEQNLGIYTFE 890
Query: 1155 AVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSE 1214
VA +L+R+IP F LT+W+ S R + ++ R L+I+++ + + + +E
Sbjct: 891 NVAFHILKRRIPRYSFSTLTEWYKSSDPVHTSRLLRHLSERTSTVLDILDEAETVTKNAE 950
Query: 1215 LARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPE 1274
ARVFG+DFFSV+SRGSQ++VES + R+A ++++ +SP V Q A EC+PL+MEP
Sbjct: 951 FARVFGVDFFSVISRGSQFKVESFMFRIAKPESFVLLSPSKEDVGKQNAAECMPLIMEPL 1010
Query: 1275 SGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLK 1333
S FY P+VVLDFQSLYPS+MIAYN C+ TCLG++ + +N GV+ +L+ L+
Sbjct: 1011 SAFYNGPLVVLDFQSLYPSIMIAYNYCYSTCLGRVGEFQGQNKFGVTELHHPAGLLQKLQ 1070
Query: 1334 DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLA 1393
D + + PNG+MYV VRKG+L R+L E+L TR+MVKQA+K A + L RI +ARQL+
Sbjct: 1071 DHITVAPNGIMYVKSDVRKGLLGRMLTELLETRVMVKQAMKS-ARGNKALGRILDARQLS 1129
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
LK IANVTYGYT+A +SGRMP E+ADSIVQ GR TLEKA+ +N +KW KV+YGDTD
Sbjct: 1130 LKYIANVTYGYTSATYSGRMPAVEIADSIVQSGRETLEKAVRIINATKKWGGKVVYGDTD 1189
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 55/258 (21%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M+ +P V+I ID+ +A P L + VP+IR+YG + QK C
Sbjct: 1 MSSQEP---TLQVQINQIDYTLAQP--------GLLDNASLPRVPIIRIYGPSSTNQKAC 49
Query: 61 LHIHRALPYLYVPCADI--PVQLRQEDDGYMHAISLALEKALKV---KGSAGSKRQHVHE 115
+HIH+ PY ++ P + + Y+ ++++L A+ + + + Q+V
Sbjct: 50 VHIHQVYPYFFIEYNGTINPDSVNR----YIAQLTVSLNHAIAISTKRNPTSTNSQYVRA 105
Query: 116 CSLVRA------------------------------KKGGAVFDKSLQPHESHIPFLLQF 145
LV+ + G V + +ESH+ ++LQF
Sbjct: 106 IILVKGVHFYGFHSSYTPFLKVLMADPSIVNRAVTIMQSGTVMRTRFRVYESHLSYILQF 165
Query: 146 LVDYNLYGMGHLHLSKLKFRHPVPDAFFPRKF-NYSSKQASADFQVIGCGSYPMHLMGHQ 204
+ D+ LYG G ++L ++ R DA ++ ++SS + S F+ S + ++ HQ
Sbjct: 166 MCDFGLYGCGWINLGEVHQRGHDDDAEVRQQASSFSSPKVSPHFRQSRM-SLEVDVISHQ 224
Query: 205 I---KTLSGLNIKVFLSL 219
I L+ LN+ L++
Sbjct: 225 ILNRHLLTALNVHHKLTI 242
>gi|409083516|gb|EKM83873.1| hypothetical protein AGABI1DRAFT_32464 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1543
Score = 405 bits (1040), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/533 (40%), Positives = 312/533 (58%), Gaps = 46/533 (8%)
Query: 926 SQISGPDGRS----KPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
SQI GP + K +P++ + A++ + + +T+LS+EV A + G P+P D I
Sbjct: 661 SQIDGPTQFNIYGFKGSPIAHVY----ATSRSKQSMTILSVEVMAPTHGKNVPNPESDPI 716
Query: 982 NVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSF 1041
+ F+ V V+ + + R I D + + E+ L + I+
Sbjct: 717 CIAVYGFQVAGTDDVHTGVIAIQNIQLNPRR---IRDFHLEIVDTELDLLNRLSDIVAEL 773
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLA 1101
DPDIL GW++Q S G+L RA H + +SR P
Sbjct: 774 DPDILTGWEVQQASWGYLWLRAKHYDFDFQDFLSRAP----------------------- 810
Query: 1102 EPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
P+ A S D W R S + V GR VLNVWR+MR E+ L YT+ VA V+
Sbjct: 811 -PLKAGS--------NDRWDRQTTSNIKVAGRHVLNVWRIMRSELALTSYTLSNVAFHVM 861
Query: 1162 RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
R+++P F L++W+ S + Y++ R L+I+ +++ +T+E AR+FG+
Sbjct: 862 RQRVPFYSFATLSRWYDSTGPSHMVALMHYLIQRNCTTLQILEATELVTKTAEFARIFGV 921
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADP 1281
DF SV+SRGSQ++VES + R+A ++N++ +SP V Q A EC+PL+MEP S FY P
Sbjct: 922 DFHSVISRGSQFKVESFMFRIAKSENFVLLSPSKSDVGLQNAAECMPLIMEPMSAFYTSP 981
Query: 1282 VVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN-TLGVSSFRPDLHVLRDLKDELLIPP 1340
+VVLDFQSLYPS+MIAYN C+ TCLG+I P + N GV++ +L L++ + + P
Sbjct: 982 LVVLDFQSLYPSVMIAYNYCYSTCLGRIKPFQGNYKFGVTNLDLGPGILDALQEHITVAP 1041
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
NG+MYV VRKG+L R+L E+L+TR+MVKQA+K + R+ +ARQLALK IANV
Sbjct: 1042 NGIMYVKSNVRKGLLGRMLVELLNTRVMVKQALKSAKSDKAA--RVLHARQLALKYIANV 1099
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
TYGYT+A +SGRMP E+ADSIVQ GR TLEKAI+F+N + KW AKV+YGDTD
Sbjct: 1100 TYGYTSATYSGRMPAVEIADSIVQTGRETLEKAINFINGSGKWGAKVVYGDTD 1152
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 65/208 (31%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSV+I ID+ ++PP P L VP++R++G + G +TCLH+H+ PY
Sbjct: 1 MFSVQIYQIDYVLSPPGP--------LDRSHYPRVPILRIFGQSSVGLRTCLHVHQVYPY 52
Query: 70 LYVPC-ADIPVQ---------------------LRQEDDGYMHAISLALEKALKVKGSAG 107
Y+ D+ ++ +R+ HAI+L+L+ +
Sbjct: 53 CYIEYQGDLDLRHGTFMSCPVFINLRPRTVKQYVRKFKKSLNHAIALSLK-----RDPNS 107
Query: 108 SKRQHVHECSLVRAKK------------------------------GGAVFDKSLQPHES 137
+K Q+V LV+ K G+V + +ES
Sbjct: 108 TKSQYVCAVVLVKGVKFYGFHSQYSPFLKIILLDPRLMNRVATILQSGSVMSQRFPVYES 167
Query: 138 HIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
H+ F LQF+ D+ LYG G + +SK R
Sbjct: 168 HLSFTLQFMCDFGLYGCGSVGISKAYRR 195
>gi|156386840|ref|XP_001634119.1| predicted protein [Nematostella vectensis]
gi|156221198|gb|EDO42056.1| predicted protein [Nematostella vectensis]
Length = 497
Score = 404 bits (1039), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/437 (48%), Positives = 280/437 (64%), Gaps = 31/437 (7%)
Query: 1026 KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAA 1085
KE LF + + +DPD+L+G+++Q S G+L +RA + L + ++R S +
Sbjct: 5 KEKDLFPALLGLFREWDPDVLIGYEVQMLSWGYLIQRALVFDLDLASKLARVSGSSSSSN 64
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
DSE +D+WG HAS + + GRIVLNVWRLMR E
Sbjct: 65 MDSE---------------------------KDQWGAAHASEIKIAGRIVLNVWRLMRHE 97
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
V LN+Y+ E VA VL +IP P+R L+ W+ R+R V++ V R N+ ++ Q
Sbjct: 98 VTLNVYSFENVAFHVLHERIPLFPYRSLSDWWDHKTDMHRWRTVQHYVTRCCGNVRLLEQ 157
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
LD I RTSELAR+FGI F+SV+SRGSQ+RVESM+LR+A NY+A SP Q S A E
Sbjct: 158 LDFIGRTSELARLFGILFYSVISRGSQFRVESMMLRIAKPMNYIAASPSVQQRNSMRAPE 217
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT---LGVSSF 1322
+PLV+EPES FY PV+VLDFQSLYPSMMIAYN C+ TCLG++ E + G S
Sbjct: 218 VIPLVLEPESRFYHHPVLVLDFQSLYPSMMIAYNYCYSTCLGRVSSIAEGSHFKFGALSL 277
Query: 1323 RPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQI 1382
+L+ L+ ++ I PNGV +V VR+GVLPR+LE+IL+TRIMVK ++KK ++
Sbjct: 278 SEPPSLLKQLERDIHISPNGVAFVKSNVRRGVLPRMLEDILNTRIMVKNSMKKWKDNKST 337
Query: 1383 LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEK 1442
+R+ +ARQL LKLIANVTYGYT+A FSGRMPC E+ADSIV+ R TLE+AI VN K
Sbjct: 338 -YRMLDARQLGLKLIANVTYGYTSANFSGRMPCVEIADSIVRKARETLERAIDLVNTTSK 396
Query: 1443 WKAKVIYGDTDRYTVCI 1459
W A+V+YGDTD V +
Sbjct: 397 WGARVVYGDTDSLFVLL 413
>gi|378734453|gb|EHY60912.1| DNA polymerase zeta subunit [Exophiala dermatitidis NIH/UT8656]
Length = 1773
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/551 (38%), Positives = 323/551 (58%), Gaps = 60/551 (10%)
Query: 925 ISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRY 978
+SQI GP ++K GF Q S + ++++++EV +RG L P+P
Sbjct: 882 LSQIDGPTQKNK------YGFKYSQKQVSTSVQHETQYMSIMTLEVHVNTRGSLAPNPEE 935
Query: 979 DSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSK------------ 1026
D+++ + + D D VE + K +H ++ + D + + +
Sbjct: 936 DAVSCIFWCLQTD-DEDVEANMTKGSKEGTHM-GIIAVGD-QAHIAKRIGRTVPYDVEEE 992
Query: 1027 --EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKI 1083
E+ + + I+ +DPDIL G+++ S G+L ERA + +++SR +S
Sbjct: 993 ETELDALTRLVDIVRHYDPDILTGYEVHNSSWGYLIERARVKYDLNYCDELSRMKAQSHG 1052
Query: 1084 AAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMR 1143
G + D WG H S + V GR +N+WR MR
Sbjct: 1053 RFGRDD----------------------------DRWGFNHTSTIRVTGRHTINIWRAMR 1084
Query: 1144 GEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIM 1203
GE+ L YT+E V +L ++IP F LT+W+ S R + VEY R ++++EI+
Sbjct: 1085 GELNLLQYTMENVVYHLLHQRIPHYAFVDLTRWYRSKNPRNLAKVVEYFCSRVQMDIEIL 1144
Query: 1204 NQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPA 1263
+ +++ RTSE AR+ G+D+FSV+SRGSQ++VES++ R+A +N++ +SP QV Q A
Sbjct: 1145 DANELVPRTSEQARLLGVDWFSVISRGSQFKVESLMFRIAKPENFILVSPSRRQVGGQNA 1204
Query: 1264 MECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSF 1322
+ECLPLVMEP S FY P++VLDFQSLYPS+MIAYN C+ T LG+++ + N +G + +
Sbjct: 1205 LECLPLVMEPRSDFYTSPLLVLDFQSLYPSVMIAYNYCYSTFLGRVVSWRGTNKMGFTDY 1264
Query: 1323 RPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQI 1382
R + +L LK+ + I PNG+MY P +RK +L ++L EIL TR+MVK + K+ +
Sbjct: 1265 RREPRLLELLKEHINIAPNGIMYAKPHIRKSLLAKMLSEILETRVMVKSGM-KVDKDDKT 1323
Query: 1383 LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEK 1442
L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ ++
Sbjct: 1324 LQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIALIHSVDR 1383
Query: 1443 WKAKVIYGDTD 1453
W A+V+YGDTD
Sbjct: 1384 WGAEVVYGDTD 1394
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 95/199 (47%), Gaps = 43/199 (21%)
Query: 11 FSVRIVSIDHYMA-------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
F VR+ IDHY A PP+P D+ + + VIRV+G+T GQK +HI
Sbjct: 4 FRVRLNCIDHYQAVPLDEFDPPVPQ-DVATTGNAARDRPRISVIRVFGATETGQKVLMHI 62
Query: 64 HRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKV---KGSAGSKRQHVHECSLVR 120
H AL Y Y+ + V R++ D + + L+++ AL V K K ++V SLV+
Sbjct: 63 HGALQYTYIEYSGSLV--REDVDVAIRTLQLSIDHALAVSYRKNIYEGKHRYVAHISLVK 120
Query: 121 A------------------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYN 150
+ GAV + LQPHESH+ +L Q++ DYN
Sbjct: 121 GIPFYGFHVGYRFYLKIYLLNPLHMTRLADLLREGAVMKRVLQPHESHLQYLAQWMCDYN 180
Query: 151 LYGMGHLHLSKLKFRHPVP 169
LYG G++ K KFR PVP
Sbjct: 181 LYGCGYIECEKFKFRGPVP 199
>gi|429862842|gb|ELA37449.1| DNA polymerase zeta catalytic subunit [Colletotrichum gloeosporioides
Nara gc5]
Length = 1719
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/552 (40%), Positives = 323/552 (58%), Gaps = 53/552 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQ-DPASAGA-----GEQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP TP ++ GF+ P + ++ +++EV +RG P+P
Sbjct: 847 LSQIDGP------TPKNKHGFKYSPKKKSTSVKHEAQYMSTMALEVHVNTRGKFVPNPEE 900
Query: 979 DSINVVALAFEND------SDHAVEI---YVLLYCKSESHQRSLVGIPDCKVFVCSKEIH 1029
D + + + + D D A I V+L E R I ++ S E+
Sbjct: 901 DEVQCIFWSIKADGTISASQDVAGGIIAGVVVLSPDGELAARMRRYIA-AEILEESSELD 959
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDS 1088
L ++I+ + DPDIL G+++ G S G+L ERA L ++ SR S G
Sbjct: 960 LMVRMVEIVRAHDPDILTGYEVHGSSWGYLIERARLKYDYDLCDEFSRMKSNSHGRIGKE 1019
Query: 1089 EISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKL 1148
D WG S + V GR ++N+WR MRGE+ L
Sbjct: 1020 N----------------------------DRWGFNTTSTIRVTGRHMINIWRAMRGELNL 1051
Query: 1149 NMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDM 1208
YT+E V VL R+IP +R LT+W+ S R + + Y + R +++++I+ ++
Sbjct: 1052 LQYTMENVVWHVLHRRIPHYSWRTLTEWYKSSKQRDLDKLLRYYLARTRIDIQILESNEL 1111
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N++ +SP QV Q A+ECLP
Sbjct: 1112 IPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGGQNALECLP 1171
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLH 1327
LVMEP+S FY P++VLDFQSLYPS+MIAYNLC+ T LG+I+ + N +G + ++
Sbjct: 1172 LVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNLCYSTFLGRIVNWRGMNKMGFTEYQRHKR 1231
Query: 1328 VLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIF 1387
+L LKD + I PNG+MYV P++RK +L ++L EIL TR+MVK +K+ + L ++
Sbjct: 1232 LLELLKDHINITPNGMMYVRPEIRKSLLAKMLGEILETRVMVKSGMKQ-DKDDKTLQQLL 1290
Query: 1388 NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKV 1447
N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ E+W A+V
Sbjct: 1291 NNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSQERWGAEV 1350
Query: 1448 IYGDTDRYTVCI 1459
+YGDTD V +
Sbjct: 1351 VYGDTDSLFVYL 1362
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 133/318 (41%), Gaps = 86/318 (27%)
Query: 9 NIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
++F VR+ IDHY A P P Q K +VPV+RV+GST GQK C HIH
Sbjct: 2 DLFRVRLNCIDHYQATPTRYDPQLRNDIGPAQAKKGPKVPVVRVFGSTETGQKVCAHIHG 61
Query: 66 ALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA 121
A PYLYV + L ED G Y++ + L+++ AL V + + V +LV+
Sbjct: 62 AFPYLYV---EYQGSLEPEDVGAYIYRLHLSIDHALAVSYRRDQYADNAKFVARITLVKG 118
Query: 122 ------------------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ G + K QP+E+H+ +LLQF+ DYNL
Sbjct: 119 IPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVILKKKFQPYEAHLQYLLQFMTDYNL 178
Query: 152 YGMGHLHLSKLKFRHPVPDAFFPRKFNYSSKQASADFQVIGCGSYPMHLMGHQIKTLSGL 211
YG G+L S + FR P+P + V G + H H I L
Sbjct: 179 YGCGYLDASDVFFRGPIP-----------------SYDVEGNSQHLWH--DHSIPRGRVL 219
Query: 212 NIKVFLSLKEMLQWMVCLIHCSATDIFASSIFLYDDCVGDIVNQRLM--------MYTSL 263
LSL + HCS D CV +I+N+R++ L
Sbjct: 220 ED---LSLPR-------VSHCSVE---------VDICVQNIINRRMVKERRLHHDFEERL 260
Query: 264 SQTRSDVKMVQSLVPIWE 281
+DVK+V S+ +W+
Sbjct: 261 KPLPADVKLVYSMAGLWK 278
>gi|347965478|ref|XP_003435770.1| AGAP013386-PA [Anopheles gambiae str. PEST]
gi|333470492|gb|EGK97643.1| AGAP013386-PA [Anopheles gambiae str. PEST]
Length = 2191
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 243/618 (39%), Positives = 348/618 (56%), Gaps = 81/618 (13%)
Query: 886 EADEMISTEPTPDLNGVTAIMHNEGHIAEPNACADCLQDISQISGPDGR---------SK 936
E+ M STE P N T NE AE NA + + +S I+ + S
Sbjct: 1263 ESSMMESTEAAP--NAAT----NEEQ-AEKNAAEETIAPVSSIASSNQSDLEQSNANISS 1315
Query: 937 PTPL-SQIGF-------QDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAF 988
TP + GF QD S LT++S+E+ +RGDLRP+P D I +
Sbjct: 1316 ATPSDNTFGFKVDYENLQDAKSKCEYNYLTVMSVEIHVNTRGDLRPNPATDPIAAIFYRI 1375
Query: 989 END-----------------SDHAVEIYVLLYCKSESHQRSLVGIPDC----KVFVCSKE 1027
ND DH + + ++ S C V + S E
Sbjct: 1376 HNDVPPNHPRASSVCGIILNRDHEGREFERVQGQAGGKTASF-KYNQCPYVADVVLVSDE 1434
Query: 1028 IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGD 1087
L+ F+ ++ +DPDI G++I+ S G++ ER L + L+ +SR P + +
Sbjct: 1435 SELYEKFLLLISFWDPDIFTGYEIESVSWGYVIERGYALEMNLMKRLSRVPSAETVHVSE 1494
Query: 1088 SEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVK 1147
E E ++E +++GL + GRI+L++WRLMR E+
Sbjct: 1495 EEQRE----------------------LLE---MHDYSAGLKIPGRILLDIWRLMRHEIA 1529
Query: 1148 LNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLD 1207
L YT E V +L R++P+ +R L++ + S P +R+ +EY + R N EI+NQLD
Sbjct: 1530 LTSYTFENVVYHILHRRVPNHSYRQLSRLW-SKP-YSRWIVLEYYLERVNGNFEILNQLD 1587
Query: 1208 MINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECL 1267
+I RT+ELA++FGI F+ VLSRGSQ+RVESM++R+A +N++++SP +Q A A E L
Sbjct: 1588 LIGRTAELAKLFGIQFYEVLSRGSQFRVESMMMRIAKPRNFVSVSPSINQRAHMRAPEYL 1647
Query: 1268 PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT----LGVSSFR 1323
PL++EP S FYADP++VLDFQSLYPS++IAYN CF TCLG+I ++T G S R
Sbjct: 1648 PLILEPNSRFYADPIIVLDFQSLYPSVIIAYNYCFSTCLGRIEHLGKDTESFEFGASRLR 1707
Query: 1324 PDLHVLRDLKDELLI--PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
+L+ L D+ L+ P GV +V +VR+GVLPR+L EIL+TR+MVK+++ KL
Sbjct: 1708 VPPKMLKALLDKNLVTFSPCGVAFVKKRVREGVLPRMLSEILNTRLMVKKSM-KLHKDNS 1766
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE 1441
+L R+ ++RQL LKLIANVTYGYTAA FSGRMPC E+ DS+V GR TLE+AI V E
Sbjct: 1767 VLQRVLHSRQLGLKLIANVTYGYTAANFSGRMPCVEIGDSVVAKGRETLERAIKLVEGTE 1826
Query: 1442 KWKAKVIYGDTDR-YTVC 1458
+W AKV+YGDTD + +C
Sbjct: 1827 RWGAKVVYGDTDSLFVLC 1844
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 106/214 (49%), Gaps = 34/214 (15%)
Query: 13 VRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
+RIVS+DHYM+ P P +D CYS +G +V +VPVIR++GS G +C+HIH PY YV
Sbjct: 10 IRIVSVDHYMSKPDPQFDTCYSEFRGAEVKQVPVIRLFGSNAEGTHSCVHIHGVFPYFYV 69
Query: 73 PCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAKK-------- 123
P D V R D ++ ++ AL+K + V G A S+ +H+ + LV+
Sbjct: 70 PY-DGSVADRLAVDKKIYQLAGALDKGINVMLGRASSQAKHIFKIVLVKGIPIYGYHRNP 128
Query: 124 ----------------------GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSK 161
G + S Q HE+HIP++LQF +DYNLYGM L L
Sbjct: 129 HHYFKIYMYNPYLVRNATQLLMNGTILSGSYQVHETHIPYILQFFIDYNLYGMSFLELDS 188
Query: 162 LKFRHPVPDAFFPRKFNYSSKQASADFQVIGCGS 195
R D R N K ++++++ S
Sbjct: 189 KGLRQRTGDVEGDR--NIPPKMTTSEYEIDALAS 220
>gi|392597385|gb|EIW86707.1| hypothetical protein CONPUDRAFT_95484 [Coniophora puteana RWD-64-598
SS2]
Length = 1571
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/508 (41%), Positives = 297/508 (58%), Gaps = 35/508 (6%)
Query: 953 AGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
G +++L+ E+ A S D P+ D I F + S A ++ ++E S
Sbjct: 724 GGNDMSILTFEIFALSVDDKFPNSTSDEIVAAFFTFLDHSTQATPRQGIILVRNERLNPS 783
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
G+ D ++ + E+ L + I + DPDI+ GW++Q S G+L R + G+ +
Sbjct: 784 --GLRDFEIEIVMHELDLINAIIDAVVDLDPDIIAGWEVQTSSWGYLCSRGNNYGLDVGE 841
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
ISR P ++R +D WG + L + G
Sbjct: 842 HISRAP---------GRFNQRN----------------------DDRWGIRTTTSLKIVG 870
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R V NVWRLMR E LNMYT E V+ L +++P +VLT W+ S + Y
Sbjct: 871 RHVFNVWRLMRAEHSLNMYTFENVSLHALEKRVPKYTPKVLTTWYLSEDLSLFTTVLRYF 930
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
R + L+++ Q D+I +TSE ARVFG+DFFSV+SRGSQ++VES + R+A ++++ +S
Sbjct: 931 AERTCMTLQLLAQADVITKTSEFARVFGVDFFSVISRGSQFKVESFMFRIAKPESFVLLS 990
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P V Q A EC+PL+MEP S FY P+ VLDFQSLYPS+MIAYN C+ TCLG++
Sbjct: 991 PSKQDVGRQNAAECMPLIMEPLSAFYNGPLAVLDFQSLYPSIMIAYNYCYSTCLGRVSGF 1050
Query: 1313 K-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ +N LGVS +L LKD L + PNG++YV P +RKG+L R+L E+L TR+MVKQ
Sbjct: 1051 QGKNKLGVSELNISPSLLNRLKDHLEVSPNGIVYVKPTIRKGLLGRMLTELLDTRVMVKQ 1110
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
A+K A + L +I +ARQL+LK IANVTYGYT+A FSGRMP E+ADSIVQ GR TLE
Sbjct: 1111 AMKT-AQGNKALRKILDARQLSLKYIANVTYGYTSATFSGRMPAVEIADSIVQSGRETLE 1169
Query: 1432 KAISFVNENEKWKAKVIYGDTDRYTVCI 1459
KAI + N++W A+V+YGDTD V +
Sbjct: 1170 KAIQLIETNKRWGARVVYGDTDSVFVYL 1197
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 83/183 (45%), Gaps = 36/183 (19%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
SVRI IDH + P GY +VPVIR+YG + G K C+HIH+ PY
Sbjct: 8 LSVRITQIDHILRPS--GY------FDKVPFPQVPVIRIYGVSSVGHKACVHIHQVYPYF 59
Query: 71 YVPCADIPV-QLRQEDDGYM-----HAISLALEKALK---------VKGSAGSKRQHVHE 115
+V + + E G + HAI+L+L++ L VKG +H
Sbjct: 60 FVEYNGLMTPESVNEYIGKLIVSLNHAIALSLKRDLDSQFVRAILLVKGIHFYGFHSMHS 119
Query: 116 CSL-------------VRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKL 162
L V + G V + +ESH+ F+LQF+ D+ LYG G +HL ++
Sbjct: 120 PFLKILVLDPSLYSRAVNLMRSGVVMHTRFRIYESHLNFILQFMCDFGLYGCGWIHLGQI 179
Query: 163 KFR 165
FR
Sbjct: 180 FFR 182
>gi|400595538|gb|EJP63333.1| DNA polymerase family B [Beauveria bassiana ARSEF 2860]
Length = 1672
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/548 (39%), Positives = 323/548 (58%), Gaps = 57/548 (10%)
Query: 925 ISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRY 978
+SQI GP TP ++ G+ Q S + ++ +S+EV +R L P+P
Sbjct: 785 LSQIDGP------TPKNKHGYKYTQQRKSTSVQHEVQYMSTMSLEVHVNTRAKLVPNPEE 838
Query: 979 DSINV---------VALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSK--E 1027
D + V A ++D D + ++L ++ +R CK V + E
Sbjct: 839 DEVQCIFWCCKGDEVTYASQDDGDGTISGLIVLASGGDAAKRMR---KSCKTEVIEEKTE 895
Query: 1028 IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAG 1086
+ L + ++ DPD+L G+++ GGS GFL ERA L +++SR +S G
Sbjct: 896 LDLLVRLVDVVKELDPDVLTGYEVHGGSWGFLMERARLKYDYNLCDELSRVNAQSHGRFG 955
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D WG S + V GR ++N+WR MRGE+
Sbjct: 956 KQS----------------------------DRWGFNTTSTIRVTGRHMINIWRAMRGEL 987
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT+E VA +L R++P ++ LT W+ SG + + Y+ R K++L+I+
Sbjct: 988 NLLQYTMENVAWHLLHRRVPHYSYKTLTAWYKSGKPHDLSKLLRYLQSRTKIDLQILEAN 1047
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
++I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L ISP QV SQ A+EC
Sbjct: 1048 ELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLISPSKKQVGSQNALEC 1107
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP-SKENTLGVSSFRPD 1325
LPLVMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ N +G + ++
Sbjct: 1108 LPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVNWCGTNKMGFAEYKRQ 1167
Query: 1326 LHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR 1385
++ LKD + I PNG+M+V ++RK +L ++L EIL TR+MVK +K+ ++L +
Sbjct: 1168 AGLMALLKDHINIAPNGMMFVKAEIRKSLLAKMLTEILETRVMVKSGMKE-DKDDKMLQQ 1226
Query: 1386 IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKA 1445
+ N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ R TLE++I++++ EKW A
Sbjct: 1227 LLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTARETLERSIAYIHTVEKWGA 1286
Query: 1446 KVIYGDTD 1453
+V+YGDTD
Sbjct: 1287 EVVYGDTD 1294
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 40/198 (20%)
Query: 9 NIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
++F VR+ ID Y A P P Q + +VP+IR++GST GQK C H+H
Sbjct: 2 DLFRVRLNCIDSYQATPTIHDPQLRNDIRPSQAARGPKVPIIRIFGSTETGQKVCAHVHG 61
Query: 66 ALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA 121
A PYL+V + L Q++ G +++ + L+++ AL V + G + V +LV+
Sbjct: 62 AFPYLFV---EYEGGLSQDEVGSFIYRLHLSIDHALSVSFRRDEQGLNSRFVARITLVKG 118
Query: 122 K------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ GA+ + QP+E+H+ +L QF++DYNL
Sbjct: 119 VPFYGYHVGYRFFLKIYMFNPMVMTRLADLLQQGAILKQKFQPYEAHLQYLSQFMIDYNL 178
Query: 152 YGMGHLHLSKLKFRHPVP 169
+G ++ ++ FR PVP
Sbjct: 179 FGCDYMDAAQAAFRAPVP 196
>gi|281208977|gb|EFA83152.1| DNA polymerase zeta catalytic subunit [Polysphondylium pallidum
PN500]
Length = 2058
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/539 (40%), Positives = 313/539 (58%), Gaps = 68/539 (12%)
Query: 935 SKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVAL------AF 988
SK P SQ Q S + LTLLS+E+ +RGDL PDP D I + A
Sbjct: 1282 SKLNPHSQ-NAQKELSNNLNQFLTLLSVELHINTRGDLNPDPEIDGIKAIIYCCRDEGAI 1340
Query: 989 ENDSDHAVEIYVLLYC----KSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPD 1044
E+ +++ +++ +L + + + G+ +C V + E L F +++ SFD D
Sbjct: 1341 ESQTENYKDLFGILMIDPAKQPDQINNNRFGL-ECTVNCYTNEYQLLKAFCELVRSFDVD 1399
Query: 1045 ILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPV 1104
I +G++IQ SLG++ ERA HL +
Sbjct: 1400 IFVGYEIQMLSLGYMIERARHLEL------------------------------------ 1423
Query: 1105 VAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRK 1164
D +G H+SG+ + GRIV+N+WRL+R E+ +++YT + + L+R+
Sbjct: 1424 -------------DRFGYDHSSGIQIIGRIVINIWRLLRHEITIDIYTYQNICFHRLKRR 1470
Query: 1165 IPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFF 1224
IP + LT W+ SG +R + + + K N +++ D+I RTSELARV+GIDFF
Sbjct: 1471 IPEYSPKTLTDWYNSG--CQTWRTLSFYLEHCKGNFDLLYSFDIIGRTSELARVYGIDFF 1528
Query: 1225 SVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVV 1284
SVLSRGSQ+RVESMLLRL +NY+ SP Q +QP E +PLVM+P S + PVVV
Sbjct: 1529 SVLSRGSQFRVESMLLRLTKPENYIMYSPSRDQTTNQPMPESIPLVMDPISKMFNSPVVV 1588
Query: 1285 LDFQSLYPSMMIAYNLCFCTCLGKILP----SKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
LDFQSLYPS+MIAYN C+ TCLG+++P S + LG +LR L D + + P
Sbjct: 1589 LDFQSLYPSIMIAYNYCYSTCLGRVIPTDPVSHDKNLGSGKINIKPGLLRLLGDNVSVSP 1648
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
N VMY + RKG+ P+LL E+L TRIM+K+A+KK +++I + + +ARQLALK++ANV
Sbjct: 1649 NEVMYTNTQTRKGLFPKLLTEVLETRIMIKKAMKKYRDNKKI-YNMLDARQLALKMMANV 1707
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
++GYTAA FSGRM C E+ADSIVQ R TLE AI +++W+AKVIYGDTD V +
Sbjct: 1708 SFGYTAATFSGRMSCIEIADSIVQTARETLEAAIRIAETSKEWRAKVIYGDTDSLFVLL 1766
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 25/160 (15%)
Query: 123 KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDA--FFPRKFNYS 180
+ G++ +E+HIPF+LQ +DYNL GM + +K+ FR P+P A + +
Sbjct: 71 RNGSIMGVKFDVYEAHIPFMLQVFLDYNLAGMSFIDFTKILFRGPLPSAKRMWGSYEHDR 130
Query: 181 SKQASADFQVIGCGSYPMHLMGHQIKTLSGLNIKVFLSLKEMLQWMVCLIHCSATDIFAS 240
S+ ++ D + I + G K S + + C + DIF +
Sbjct: 131 SQNSAPDHKNIEFRKWFSEYCGSDFKYWSPIQSRK----------TTCELEVDG-DIFDT 179
Query: 241 SIFLYDDCVGDIVNQRLMMYTSLSQTRSDVKMVQSLVPIW 280
+ Y++ YT + Q+ + K+VQSL IW
Sbjct: 180 TNINYNN------------YTPIVQSDVEQKLVQSLNSIW 207
>gi|332027078|gb|EGI67174.1| DNA polymerase zeta catalytic subunit [Acromyrmex echinatior]
Length = 1974
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 241/681 (35%), Positives = 355/681 (52%), Gaps = 91/681 (13%)
Query: 834 LRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSSLKGSDIRPVLEEMHQEADEMIST 893
++P +PPS +V W+ + + D S + + K +++ V + ++ I +
Sbjct: 963 IKPLMAPPSSKNVRDWIRAKKYISKQNSDTKSCKQNKEKALNVQDVQHPLINATNKEIKS 1022
Query: 894 EPTPDLNGVTAIMHNEGHI-------------------AEPNACADCL------------ 922
+P N ++ + E HI E D L
Sbjct: 1023 QPGTSNNLISNDSNVERHIDSLMPQQSMLNKTSDETKKLETQNSNDSLISEKSLDPSLKR 1082
Query: 923 ---------QDISQISGPDGR-------SKPTPLSQIGFQDPASAGAGEQLTLLSIEVQA 966
QD +Q+ G+ S + +S Q + + LTLLS+EV A
Sbjct: 1083 ALANPLLHKQDKTQLGVSYGQIECSSKGSYGSNVSNENLQKARAVTVHQYLTLLSLEVHA 1142
Query: 967 ESRGDLRPDPRYDSINVVALAFEND------SDHAVEIYVLLYCKSESHQRSLVGI---- 1016
+R DL PDP+YDSI + A ND ++ +E + + S S L I
Sbjct: 1143 VTREDLLPDPQYDSIAALFYALYNDAPTDATTNEQIE-HAAIIVNSNSISARLNKIHSAS 1201
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN-DIS 1075
C + + E F+ +K++ +PDIL+GW+++ S G++ +RA +LG+ IS
Sbjct: 1202 ARCPILYVATEQDAFNSLVKLIERHNPDILLGWEVEALSWGYVFQRAFYLGLNNFPLRIS 1261
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R P + D+ AI +D+ G + V GR +
Sbjct: 1262 RVPHMQIYSKSDAH------------------------AIEKDDIG-----DVKVSGRNL 1292
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L+VWR+MR E L YT E V VL ++P F+ L+ W+ + R + + + R
Sbjct: 1293 LDVWRIMRHEAALLTYTFENVMHHVLYERVPCPSFKTLSTWWKQESMIIKSRVIHHYIVR 1352
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
L++++ LD+I RT ELAR+FGI F+ V SRGSQ+RVES++LRLA NY+ ISP
Sbjct: 1353 VVGTLKLLSHLDVIGRTCELARLFGIQFYEVFSRGSQFRVESIMLRLAKPMNYIPISPSI 1412
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
HQ A A ECLPL+MEPES FY DP++VLDFQSLYPSM+IAYN CF TCLG+I +
Sbjct: 1413 HQRAKMRAPECLPLIMEPESKFYTDPLIVLDFQSLYPSMIIAYNYCFSTCLGRIEHIGQY 1472
Query: 1316 ---TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
G ++ R + L+D++ P GV +V +VR+G+LPR+L EIL+TR+MVK++
Sbjct: 1473 GPFEFGAATLRVRKNTALKLQDKINFSPCGVAFVKKEVRQGILPRMLSEILNTRLMVKES 1532
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K + L R+ +++QL LKLIANVTYGYT+A FSGRMPC E+ DS+V GR TLE+
Sbjct: 1533 MKLHPAENRTLQRVLHSQQLGLKLIANVTYGYTSANFSGRMPCIEIGDSVVSKGRETLER 1592
Query: 1433 AISFVNENEKWKAKVIYGDTD 1453
AI V +W A+V+YGDTD
Sbjct: 1593 AIKLVETTPRWGARVVYGDTD 1613
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 108/188 (57%), Gaps = 36/188 (19%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FS+ +V+ID Y + PIP D+ +S +G ++ +VPVIR +GST G+KTCLHIH PY
Sbjct: 1 MFSITLVNIDSYQSSPIPELDVTFSEFRGSEIKKVPVIRAFGSTATGKKTCLHIHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
LYVPC +++ D Y + ++ A++ AL GS S QHV++ V
Sbjct: 61 LYVPCT-----VQENMDSYAYQLAAAIDSALNTSFGSTLSTNQHVYKIQRVSGIPFYGYH 115
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ G + +++LQP+E+HIP++LQF++DYNLYGM ++
Sbjct: 116 EKEHLFFKIYFYNPAIIKRTADLLQNGVILNQTLQPYEAHIPYILQFMIDYNLYGMNLIN 175
Query: 159 LSKLKFRH 166
L+ +K+RH
Sbjct: 176 LNSVKYRH 183
>gi|380491086|emb|CCF35569.1| DNA polymerase family B, partial [Colletotrichum higginsianum]
Length = 1706
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/546 (40%), Positives = 321/546 (58%), Gaps = 53/546 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQ-DPASAGAG-----EQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP TP ++ GF+ P G + ++ +++EV +RG P+P
Sbjct: 850 LSQIDGP------TPKNKHGFKYSPKKKSTGVKHEAQYMSTMALEVHVNTRGKFVPNPDE 903
Query: 979 DSINVVALAFENDSDHA---------VEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIH 1029
D + + + + DS + + V+L R IP +V + E+
Sbjct: 904 DEVQCIFWSIKADSTTSSSQATAGGMIAGVVVLSPDGGLAARMRRYIP-AEVVEEASELD 962
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDS 1088
L ++++ S DPDIL G+++ G S G+L ERA L ++ SR S G
Sbjct: 963 LMVRMVEVVRSHDPDILTGYEVHGSSWGYLIERARVKYDYDLCDEFSRMKSNSHGRIGKE 1022
Query: 1089 EISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKL 1148
D WG S + V GR ++N+WR MRGE+ L
Sbjct: 1023 N----------------------------DRWGFNTTSTIRVTGRHMINIWRAMRGELNL 1054
Query: 1149 NMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDM 1208
YT+E VA VL R+IP ++ LT+W+ S R + + Y + R + ++ I+ ++
Sbjct: 1055 LQYTMENVAWHVLHRRIPHYTWQTLTEWYNSSRQRDLDKLLRYYLARTRTDIHILESNEL 1114
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N++ +SP QV Q A+ECLP
Sbjct: 1115 IPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGGQNALECLP 1174
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE-NTLGVSSFRPDLH 1327
LVMEP+S FY P++VLDFQSLYPS+MIAYNLC+ T LG+I+ + N +G + ++
Sbjct: 1175 LVMEPQSDFYNSPLLVLDFQSLYPSVMIAYNLCYSTFLGRIVSWRGMNKMGFTEYQRHRR 1234
Query: 1328 VLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIF 1387
+L LKD + I PNG+M+V P++RK +L ++L EIL TR+MVK +K+ + L ++
Sbjct: 1235 LLELLKDYINITPNGMMFVRPEIRKSLLAKMLGEILETRVMVKAGMKQ-DKDDKTLQKLL 1293
Query: 1388 NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKV 1447
N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ E+W A+V
Sbjct: 1294 NNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSQERWGAEV 1353
Query: 1448 IYGDTD 1453
+YGDTD
Sbjct: 1354 VYGDTD 1359
Score = 106 bits (265), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 95/198 (47%), Gaps = 40/198 (20%)
Query: 9 NIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
++F VR+ IDHY A P P Q K +VPV+RV+GST GQK C HIH
Sbjct: 2 DLFRVRLNCIDHYQATPTHYDPQLRNDVGPGQAKKGPKVPVVRVFGSTETGQKVCAHIHG 61
Query: 66 ALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA 121
A PYLYV + L E+ G Y++ + L+++ AL V + G + V +LV+
Sbjct: 62 AFPYLYV---EYQGSLEPEEVGAYIYRLHLSIDHALAVSYRRDQYGDNAKFVARITLVKG 118
Query: 122 ------------------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ G + QP+E+H+ +LLQF+ DYNL
Sbjct: 119 IPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVILKSKFQPYEAHLQYLLQFMTDYNL 178
Query: 152 YGMGHLHLSKLKFRHPVP 169
YG G+L S + FR PVP
Sbjct: 179 YGCGYLETSDVYFRGPVP 196
>gi|315047094|ref|XP_003172922.1| DNA polymerase zeta catalytic subunit [Arthroderma gypseum CBS
118893]
gi|311343308|gb|EFR02511.1| DNA polymerase zeta catalytic subunit [Arthroderma gypseum CBS
118893]
Length = 1681
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/553 (40%), Positives = 327/553 (59%), Gaps = 55/553 (9%)
Query: 920 DCLQDISQISGPDGRSKPTPLSQI---------GFQ----DPASAGAGEQ--LTLLSIEV 964
+CL++ S D ++ P+SQI GF+ D +S E ++++S+EV
Sbjct: 776 NCLKN----SSADTTARGLPISQIDAPTQHNKHGFKYSQRDKSSTIQHEANYMSVMSLEV 831
Query: 965 QAESRGDLRPDPRYDSINVV--ALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVF 1022
+RG L P+P D + + ++A E + H + + S + +G+ +
Sbjct: 832 HVNTRGTLAPNPEEDEVACIFWSIASEEEGRHRGIVALSETSNLSSKFKCELGV---EFQ 888
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLES 1081
+ E+ + + I I+ +DPDIL G+++ GS G+L ERA L ++ SR +S
Sbjct: 889 EETSELEVINRIIGIVRYYDPDILTGYEVHNGSWGYLIERARRGYDYDLCDEFSRVKSQS 948
Query: 1082 KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRL 1141
G D WG H S + V GR ++N+WR
Sbjct: 949 HGRIGRET----------------------------DRWGFNHTSTIRVTGRHMINIWRA 980
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
MRGE+ L YT+E V +L ++IP PF LT+WF S R + + Y R LNLE
Sbjct: 981 MRGELNLLQYTMENVVFHLLHKRIPHYPFEDLTRWFKSDRPRDVAKTIRYFSLRVDLNLE 1040
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQ 1261
I++ ++I RTSE AR+ GIDF+SV SRGSQ++VES++ R+A +N++ ISP QV Q
Sbjct: 1041 ILDANELIPRTSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFVLISPRRKQVGQQ 1100
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVS 1320
A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G++
Sbjct: 1101 NALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNKMGIT 1160
Query: 1321 SFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ 1380
+ + +L LKD++ I PNG++Y +VRK +L ++L EIL TR+MVK +K+
Sbjct: 1161 DYEREPGLLGLLKDKVNIAPNGIIYAKQEVRKSLLAKMLTEILETRVMVKNGMKE-DKDD 1219
Query: 1381 QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN 1440
+ L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ R TLEKAI+ ++
Sbjct: 1220 RPLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEKAIALIHSV 1279
Query: 1441 EKWKAKVIYGDTD 1453
++W A+V+YGDTD
Sbjct: 1280 KRWGAEVVYGDTD 1292
Score = 96.7 bits (239), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 37/195 (18%)
Query: 11 FSVRIVSIDHYMAPPI---PGY--DICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
F V + +DHY A P P + + S L+ + +VPVIRV+G+T GQK C HIH
Sbjct: 4 FRVLLNCVDHYQATPTELDPQFISNDNESELRSRSI-KVPVIRVFGATETGQKVCAHIHG 62
Query: 66 ALPYLYVPC------ADIPVQLRQEDDGYMHAISLA-----------------LEKALKV 102
ALPYLY+ A++ +R HA++L+ L K +
Sbjct: 63 ALPYLYLEYKGDLNPAEVNTAIRTLHASIDHALALSYRRNPLDHSTAFVAYISLVKGIPF 122
Query: 103 KGSAGSKRQH--------VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGM 154
G R + +H L GAV + LQP+ESH+ F+ Q++ DYNL+G
Sbjct: 123 YGYHVGYRYYFKVYLLNPLHMTRLSDVLMQGAVMKRVLQPYESHLQFIPQWMCDYNLHGC 182
Query: 155 GHLHLSKLKFRHPVP 169
+++ SK+KFR PVP
Sbjct: 183 AYINCSKIKFRPPVP 197
>gi|322696805|gb|EFY88592.1| hypothetical protein MAC_05357 [Metarhizium acridum CQMa 102]
Length = 1677
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/546 (38%), Positives = 320/546 (58%), Gaps = 41/546 (7%)
Query: 925 ISQISGPDGRSKPT-PLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINV 983
+SQI GP ++K +Q G + + + ++ +S+E+ +RG P+P D +
Sbjct: 805 LSQIDGPTQKNKHGFKYTQKG-KSTSVEHEVQYMSTMSLEIHVNTRGKYVPNPEEDEVQC 863
Query: 984 V--------ALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFI 1035
+ A+ ++ + +++ + +++ + S E+ L +
Sbjct: 864 IFWVCKSDEAIGISQNTSGTIHTGIVVLSQDGKETQAMPKSTGSDIIEESSELDLIVRMV 923
Query: 1036 KILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEISERG 1094
+I+ +FDPDIL G+++ G S G+L ERA L ++ SR +S G
Sbjct: 924 EIVRTFDPDILTGYEVHGSSWGYLIERARCKYDYNLCDEFSRMKSDSHGRFGKQS----- 978
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
D WG S + V GR ++N+WR MRGE+ L YT+E
Sbjct: 979 -----------------------DRWGFNTTSTIRVTGRHMINIWRAMRGELNLLQYTLE 1015
Query: 1155 AVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSE 1214
VA +L R++P +R LT W+ SG + V Y R ++++I+ ++I RTSE
Sbjct: 1016 NVAWHLLHRRVPHYSWRTLTSWYKSGKSSDLGKVVRYYQTRTLMDIQILETNELIPRTSE 1075
Query: 1215 LARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPE 1274
AR+ G+DFFSV SRGSQ++VES++ R+A +N++ +SP QV SQ A+ECLPLVMEP+
Sbjct: 1076 QARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFILVSPSRKQVGSQNALECLPLVMEPQ 1135
Query: 1275 SGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE-NTLGVSSFRPDLHVLRDLK 1333
S FY P++VLDFQSLYPS+MIAYN C+ T LG+I + N +G + ++ +L LK
Sbjct: 1136 SAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRITNWRGVNKMGFAEYKRQEGLLALLK 1195
Query: 1334 DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLA 1393
D + I PNG+MYV P++RK +L ++L EIL TR+MVK +K ++L ++ N RQLA
Sbjct: 1196 DHVNIAPNGMMYVKPEIRKSLLAKMLTEILETRVMVKSGMKS-DKDDKVLQQLLNNRQLA 1254
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
LKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+A ++++ E+W A+V+YGDTD
Sbjct: 1255 LKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERATAYIHSVERWGAEVVYGDTD 1314
Query: 1454 RYTVCI 1459
V +
Sbjct: 1315 SLFVYL 1320
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 37/161 (22%)
Query: 43 EVPVIRVYGSTPAGQKTCLHIHRALPYLYVPC-ADIPVQLRQEDDGYMHAISLALEKALK 101
+VPV+R++GST GQK C H+H A PYLYV D+ E Y++ + L+++ AL
Sbjct: 25 KVPVVRIFGSTETGQKVCAHVHGAFPYLYVEYNGDLAPD---EVGAYIYRLHLSIDHALA 81
Query: 102 V---KGSAGSKRQHVHECSLVRA------------------------------KKGGAVF 128
V + G + V +LV+ + G +
Sbjct: 82 VSYRRDQYGENAKFVARITLVKGIPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVIM 141
Query: 129 DKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
+ QP+E+H+ +LLQF+VDYNLYG +L SK FR PVP
Sbjct: 142 KRKFQPYEAHLQYLLQFMVDYNLYGCDYLESSKTAFRSPVP 182
>gi|361125018|gb|EHK97080.1| putative DNA polymerase zeta catalytic subunit [Glarea lozoyensis
74030]
Length = 1121
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/554 (38%), Positives = 320/554 (57%), Gaps = 57/554 (10%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAG----AGEQLTLLSIEVQAESRGDLRPDPRYDS 980
+SQI GP ++K + P ++ +S+EV +RG+ P+P D
Sbjct: 241 LSQIDGPTQKNK----HGFKYTQPKKTANIIHEANYMSTMSLEVHVNTRGNFVPNPEEDE 296
Query: 981 INVVALAFENDSDHAVEIYVLLYCKSESHQRSLV-----GIPDCKVFVCS--------KE 1027
+ V + D + C++ +V G+ ++ S E
Sbjct: 297 VQCVFWCLQADDSELED-----NCETAGSHLGIVVLSEDGVAAARIAKQSGLDVVSEDSE 351
Query: 1028 IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAG 1086
+ L ++I+ ++DPDIL G+++ GGS G+L ERA L ++ SR +S G
Sbjct: 352 LDLMIRMVEIVRNYDPDILTGYEVHGGSWGYLIERARLKYDYNLCDEFSRMKSQSHGRFG 411
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
DN D+WG + S + V GR ++N+WR MR E+
Sbjct: 412 ---------KDN-------------------DKWGFNNTSTIRVTGRHMINIWRAMRAEL 443
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT+E VA +L R+IP + LT W+ + R + + + R +L+L ++ Q
Sbjct: 444 NLLQYTMENVAFHLLHRRIPHFTWADLTNWYTNDKPRDFAKLISHYTSRVQLDLGLLEQN 503
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
++I RTSE AR+ G+DFFSV SRGSQY+VES++ R+A +N++ +SP QV Q A+EC
Sbjct: 504 ELIARTSEQARLLGVDFFSVFSRGSQYKVESLMFRIAKPENFMLVSPSRKQVGGQNALEC 563
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPD 1325
LPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG+++ + N +G + ++
Sbjct: 564 LPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRVINWRGTNKMGFTEYKRQ 623
Query: 1326 LHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR 1385
+L LKD + I PNG+MYV P++RK +L ++L EIL TR+MVK + K+ + L R
Sbjct: 624 QRLLELLKDHVNISPNGMMYVKPEIRKSLLAKMLGEILETRVMVKSGM-KIDKDDKALQR 682
Query: 1386 IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKA 1445
+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+ ++ ++W A
Sbjct: 683 LLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIALIHSVKRWGA 742
Query: 1446 KVIYGDTDRYTVCI 1459
+V+YGDTD V +
Sbjct: 743 EVVYGDTDSLFVYL 756
>gi|170055192|ref|XP_001863472.1| DNA polymerase zeta catalytic subunit [Culex quinquefasciatus]
gi|167875216|gb|EDS38599.1| DNA polymerase zeta catalytic subunit [Culex quinquefasciatus]
Length = 1959
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/551 (41%), Positives = 325/551 (58%), Gaps = 49/551 (8%)
Query: 928 ISGPDGRSKPTPLSQIGFQDPASAGAG---EQLTLLSIEVQAESRGDLRPDPRYDSINVV 984
IS R+ T ++ F++ A A L ++S+E+ ++RGDLRP+P D I+ V
Sbjct: 1082 ISAATPRNNNTYGFKVSFENLQKAKATCEYNHLAVMSVELHVQTRGDLRPNPDIDPISAV 1141
Query: 985 ALAFEND--SDH----AVEIYVLLYCKSESHQRSLVGIPDCK----VFVCSKEIHLFSHF 1034
ND +DH +V +L S V C V V E L+ F
Sbjct: 1142 FYRIHNDVPADHRRAPSVCGIILNRQSSSGVVSDAVKYNQCSYTADVVVVGSERELYEKF 1201
Query: 1035 IKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERG 1094
+ ++ +DPDI G++I+ GS G+L +R L + L+ +SR P K+ + E
Sbjct: 1202 LVLISFWDPDIFAGYEIEAGSWGYLIQRGYALEMNLMKMLSRVPTAEKVHVSEEE----- 1256
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
+D + E+ ++GL + GRI+L++WRLMR E+ L YT E
Sbjct: 1257 ----------------EQDLLEMHEY----SAGLKIPGRILLDIWRLMRHEIALTSYTFE 1296
Query: 1155 AVAETVLRRKIPSIPFRVLTK-WFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTS 1213
+ +L R++ FR LT+ W S ++ +EY + R NLE++ QLD+I RT+
Sbjct: 1297 NMVYHILHRRVSRHSFRFLTRLWNKS---YTKWVVLEYYLERVNGNLELLQQLDLIGRTA 1353
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
ELA++FGI F+ VLSRGSQ+RVESM+LR+A +N++++SP Q A + E LPL++EP
Sbjct: 1354 ELAKLFGIQFYEVLSRGSQFRVESMMLRIAKPRNFVSVSPSIQQRAHMRSPEYLPLILEP 1413
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFRPDLHVLR 1330
S FYADP++VLDFQSLYPS++IAYN CF TCLG++ S+ G S R +L+
Sbjct: 1414 NSRFYADPLIVLDFQSLYPSIIIAYNYCFSTCLGRVEHLGQSEPFEFGASQLRLSPRMLK 1473
Query: 1331 DL--KDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L K+ + + P G ++V VR+G+LPR+L EIL+TR+MVK ++ KL IL R+ +
Sbjct: 1474 VLVEKNLVTVSPCGAVFVKSSVREGILPRMLNEILTTRLMVKASM-KLHKENSILQRVLH 1532
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
+RQL LKLIANVTYGYTAA FSGRMPC E+ DS+V GR TLE+AI V E+W AKV+
Sbjct: 1533 SRQLGLKLIANVTYGYTAANFSGRMPCVEVGDSVVSKGRETLERAIKLVESTERWGAKVM 1592
Query: 1449 YGDTDR-YTVC 1458
YGDTD + +C
Sbjct: 1593 YGDTDSMFVLC 1603
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 32/184 (17%)
Query: 7 DSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
D ++ S RIVS+DHYM P P +D CYS +G V +VPV+R++GST G +C+HIH
Sbjct: 4 DGSVTSFRIVSVDHYMHKPEPRFDSCYSEFRGSDVRQVPVVRLFGSTADGTHSCVHIHGV 63
Query: 67 LPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA---- 121
PYLYVP D D M+ I+ +L+KA+ V G+A S HV +LV+
Sbjct: 64 FPYLYVPY-DGASADSLAVDRLMYQIAGSLDKAINVSLGNANSAATHVFRIALVKGIPIY 122
Query: 122 --------------------KKG------GAVFDKSLQPHESHIPFLLQFLVDYNLYGMG 155
+K G + + Q +E+H+P++LQF +DYNLYGM
Sbjct: 123 GYHRKEHQFFKIFLYNPYFIRKATNLLMNGVIMSRVFQTYETHVPYILQFFIDYNLYGMS 182
Query: 156 HLHL 159
+++
Sbjct: 183 LMNV 186
>gi|115402505|ref|XP_001217329.1| hypothetical protein ATEG_08743 [Aspergillus terreus NIH2624]
gi|114189175|gb|EAU30875.1| hypothetical protein ATEG_08743 [Aspergillus terreus NIH2624]
Length = 1696
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/551 (39%), Positives = 322/551 (58%), Gaps = 51/551 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGAG------EQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP T ++ GF+ + + + ++ +S+EV +RG L P+P
Sbjct: 794 LSQIEGP------TQKNEYGFKYSQKSKSTSVEHHTQYMSSMSLEVHVNTRGVLSPNPDE 847
Query: 979 DSINVVALAFENDSDH--------AVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHL 1030
D I + +++ D + ++ + L + S E+ L
Sbjct: 848 DEITCLFWCIQSEDDSVDVNSYLPGTHVGLIFQGDGNRPEEKLSKALKISMEHESTELEL 907
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSE 1089
+ I I+ DPDI+ G+++ GS G++ ERA L +++R +S G
Sbjct: 908 INRLIDIVRYHDPDIITGYEVHNGSWGYVIERARKKYDFDLCEELARVKSQSHGRFG--- 964
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
KDA D WG TH S + V GR ++N+WR M+ E+ L
Sbjct: 965 ----------------------KDA---DRWGFTHTSSIRVTGRHMINIWRAMQNELNLL 999
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
YT+E V +L R+IP FR LT+W+ SG R + ++Y V R +++LEI++ ++I
Sbjct: 1000 QYTMENVVFHLLHRRIPHYSFRDLTEWYQSGKPRNLLKVIDYFVSRVQMDLEIIDANELI 1059
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
RTSE AR+ G+DF+SV +RGSQ++VES++ R+A +N+L +SP QV Q A+ECLPL
Sbjct: 1060 PRTSEQARLLGVDFYSVFARGSQFKVESLMFRIAKPENFLLVSPSRKQVGQQNALECLPL 1119
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHV 1328
VMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG+ + + +G + + +
Sbjct: 1120 VMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRARQWRGRDKMGFTDYARQPGL 1179
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L KD++ + PNG++Y P+VRK +L ++L EIL TR+MVK + K+ ++L R+ N
Sbjct: 1180 LDLFKDKINVAPNGMIYAKPEVRKSLLAKMLSEILETRVMVKTGM-KMDKDDKMLQRLLN 1238
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ GR TLEKAI+ ++ E+W A+V+
Sbjct: 1239 NRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQSGRETLEKAIALIHSVERWGAEVV 1298
Query: 1449 YGDTDRYTVCI 1459
YGDTD V +
Sbjct: 1299 YGDTDSLFVYL 1309
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 96/201 (47%), Gaps = 48/201 (23%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVN--EVPVIRVYGSTPAGQKTCLH 62
F VR+ +DHY PP+P Y GK + +VPVIR++G+T GQK C+H
Sbjct: 4 FQVRLNCVDHYQTTPTEFDPPLP-----YRDGAAGKYDRPKVPVIRIFGATETGQKVCVH 58
Query: 63 IHRALPYLYVPC--ADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQ-HVHECSLV 119
+H A PYLYV + P +R H+I AL A + +A KR +V +LV
Sbjct: 59 VHGAFPYLYVQYDGSLQPEDVRSAIRSLHHSIDHAL--AASYRRNAYDKRAVYVAHITLV 116
Query: 120 RAKK------------------------------GGAVFDKSLQPHESHIPFLLQFLVDY 149
+ GAV + LQP+ESH+ ++ Q++ DY
Sbjct: 117 KGVPFYGYHVGYRFFFKIYLLSPLYTTRLADLLIQGAVLKRPLQPYESHLQYVPQWMCDY 176
Query: 150 NLYGMGHLHLSKLKFRHPVPD 170
+LYG ++ K+KFR PVP+
Sbjct: 177 SLYGCAYMKCGKVKFRSPVPE 197
>gi|67537238|ref|XP_662393.1| hypothetical protein AN4789.2 [Aspergillus nidulans FGSC A4]
gi|18031889|gb|AAL09153.1| polymerase zeta subunit [Emericella nidulans]
gi|40741169|gb|EAA60359.1| hypothetical protein AN4789.2 [Aspergillus nidulans FGSC A4]
gi|259482365|tpe|CBF76778.1| TPA: DNA polymerase (EC 2.7.7.7) [Source:UniProtKB/TrEMBL;Acc:Q8X142]
[Aspergillus nidulans FGSC A4]
Length = 1681
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/559 (40%), Positives = 319/559 (57%), Gaps = 67/559 (11%)
Query: 925 ISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRY 978
+SQI GP T ++ GF Q S Q ++ +S+EV +RG L P+P
Sbjct: 806 LSQIEGP------TQKNEHGFKYSQHKKSTSVEHQTQYMSTMSLEVHVNTRGVLLPNPEE 859
Query: 979 DSINVVALAF--------ENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKV-----FVC- 1024
D I E+DS V + V+ + E P+ K+ F C
Sbjct: 860 DEIAAFFWCVNSEDEPQEEDDSLSVVNMGVVFQGEEE--------YPESKISKALRFECE 911
Query: 1025 --SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLES 1081
S E+ L + + I+ DPDI+ G+++ S GF+ ERA L +++SR
Sbjct: 912 HESTELDLINRLVDIVRLHDPDIITGYEVHNSSWGFIIERARKKYDFDLCDELSRVKSH- 970
Query: 1082 KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRL 1141
A K+A D+WG H S + + GR ++N+WR
Sbjct: 971 ------------------------AHGRFGKEA---DKWGFDHTSSIRITGRHIINIWRA 1003
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
MR E+ L YT+E V +L R+IP FR LT W+ S R + + Y R ++N+E
Sbjct: 1004 MRSEMNLLQYTMENVVFHLLHRRIPHYSFRDLTAWYQSDKPRDFMKVINYYTSRVQMNIE 1063
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQ 1261
I+N ++I RTSE AR+ GIDF+SV SRGSQ++VES++ R+A +N++ +SP QV Q
Sbjct: 1064 ILNANELIPRTSEQARLLGIDFYSVFSRGSQFKVESLMFRIAKPENFILVSPSRKQVGQQ 1123
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVS 1320
A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ T LG++ + N +G
Sbjct: 1124 NALECLPLVMEPQSDFYTSPLIVLDFQSLYPSIMIAYNYCYSTFLGRVQSWRGRNKMGFL 1183
Query: 1321 SFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ 1380
+ +L LKD + I PNG++Y +VRK +L ++L EIL TR+MVK + K+
Sbjct: 1184 DYNRPPRLLELLKDHINIAPNGMIYARSEVRKSLLAKMLTEILETRVMVKTGM-KVDKDD 1242
Query: 1381 QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN 1440
+ L R+ N RQLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+F++
Sbjct: 1243 RALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIAFIHSV 1302
Query: 1441 EKWKAKVIYGDTDRYTVCI 1459
E+W A+V+YGDTD V +
Sbjct: 1303 ERWGAEVVYGDTDSLFVYL 1321
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 48/201 (23%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F VR+ +DHY A PP+P D + + G + +VPVIR++G+T GQK C+H+H
Sbjct: 4 FQVRLNCVDHYQANPSEFDPPLPYRD---GNNEKGYMPKVPVIRIFGTTETGQKICVHVH 60
Query: 65 RALPYLYVPC-ADI-PVQLRQEDDGYMHAISLALEKALKV---KGSAGSKRQHVHECSLV 119
A PYLYV D+ P +R ++ L+++ AL V + + K V +LV
Sbjct: 61 GAFPYLYVQYDGDLSPDSVRSA----ARSLHLSIDHALAVSYRRNAHDKKTVFVAHITLV 116
Query: 120 RAKK------------------------------GGAVFDKSLQPHESHIPFLLQFLVDY 149
+ GAV + +QP+ESH+ ++ Q++ DY
Sbjct: 117 KGVPFYGYHVGYRFFFKIYLLNPIYITRLADLLLQGAVMKRPIQPYESHLQYVPQWMCDY 176
Query: 150 NLYGMGHLHLSKLKFRHPVPD 170
NL+G + K KFR P+P+
Sbjct: 177 NLFGCAFMKCGKAKFRSPIPE 197
>gi|88604886|gb|ABD46763.1| REV3 [Neurospora crassa]
Length = 1926
Score = 401 bits (1031), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/615 (37%), Positives = 344/615 (55%), Gaps = 75/615 (12%)
Query: 878 PVLEEMHQEADEMIS------TEPTPDLNGVTAIMHNEGHIAEPNACADCLQDI----SQ 927
P+LE +++ E + +P P V+ +E + P C I SQ
Sbjct: 840 PMLEAIYEAQQEECAMRGWEIADPPPSFKEVSNWWTDEQNDRNPKRCHSTPLRIKTYRSQ 899
Query: 928 ISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRYDSI 981
I+G TP ++ GF+ P + + ++ +S+EV +RG L PDP D +
Sbjct: 900 IAGV------TPKNKHGFEHPEKTKSESKQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEV 953
Query: 982 NVVALAFEND----------SDHAVEIYV-----LLYCKSESHQRSLVGIPDCKVFVCSK 1026
V ++ D A I V LL + H +P V +
Sbjct: 954 QCVFWYLRSEVNALRGTQTPDDTARGIIVFSEDSLLADRIRKH----TSVP---VVQETT 1006
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAA 1085
E+ + ++I+ + DPDI G+++ G S G+L ERA + L ++ SR +S
Sbjct: 1007 ELDMMVRMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSN--- 1063
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
+ KDA D WG S + + GR ++N+WR MRGE
Sbjct: 1064 ----------------------GRIGKDA---DRWGFNTTSSIRITGRHMINIWRAMRGE 1098
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
+ L YT+E V +L R+IP ++ L+ W+ S + + + Y + R +L++EI+ +
Sbjct: 1099 LNLLQYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILEK 1158
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
++I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L SP QV +Q A+E
Sbjct: 1159 NELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSPSRKQVGAQNALE 1218
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRP 1324
CLPLVMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++
Sbjct: 1219 CLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGRNKMGFMDYKR 1278
Query: 1325 DLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILH 1384
+L LKD + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + I
Sbjct: 1279 QEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDMDDRAI-Q 1337
Query: 1385 RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK 1444
++ N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW
Sbjct: 1338 QLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWD 1397
Query: 1445 AKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 1398 AEVVYGDTDSLFVSL 1412
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FLRLRLNCIDHYQATPTRYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D + ++L K + G R +
Sbjct: 63 FPYLYVEYDGNLEPNKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|428182003|gb|EKX50865.1| Rev3 DNA polymerase zeta, partial [Guillardia theta CCMP2712]
Length = 736
Score = 401 bits (1031), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/417 (49%), Positives = 276/417 (66%), Gaps = 35/417 (8%)
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLA 1101
DPDIL+G+++Q S G+L ER+A +G L +SR P S + R
Sbjct: 5 DPDILVGFEVQHASCGYLLERSAAIGFPLDRCLSRCPFHR------STLESR-------- 50
Query: 1102 EPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
D +G+ SG+HV GR +LNVWRL R E+KL +Y V VL
Sbjct: 51 ---------------PDTYGQQQQSGIHVCGREILNVWRLCRQEIKLGLYNYTNVCAKVL 95
Query: 1162 RRKIPSIPFRVLTKWFA--SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVF 1219
+++PS P ++L WF + P + + + Y++ +A L I+ ++++ RT ELARVF
Sbjct: 96 NKRVPSFPPQLLHSWFQHLASPHSLKRQVLLYLLEKASNTLLILEAMELVGRTCELARVF 155
Query: 1220 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA 1279
GIDFFSVLSRGSQYRVESML RLA TQN+L +SP Q SQPA EC+PLVMEP+S FY+
Sbjct: 156 GIDFFSVLSRGSQYRVESMLYRLARTQNFLLLSPSVQQRQSQPATECIPLVMEPQSAFYS 215
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL-PSKENT--LGVSSFRPDLHVLRDLKDEL 1336
PV VLDF+SLYPS++IAYN+C+ TCLGK++ P + LGVSS R +L +++E
Sbjct: 216 SPVCVLDFRSLYPSVVIAYNMCYSTCLGKLVEPDSDGNVKLGVSSLRRAPGLLASVREEA 275
Query: 1337 LIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKL 1396
+I PNG+ ++PP R+GVLPRLL EIL R+ VK+ +K++ + L+R N+RQ LKL
Sbjct: 276 IITPNGMAFLPPDKREGVLPRLLREILQARVAVKKLMKQVGGDVK-LYRTLNSRQFGLKL 334
Query: 1397 IANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
IANVTYGYT+AGFSGRMPCA+LAD+IVQ GR TLE+AI V E +W A+VIYGDTD
Sbjct: 335 IANVTYGYTSAGFSGRMPCADLADAIVQTGRETLERAIRTVEEGRQWGARVIYGDTD 391
>gi|85112057|ref|XP_964235.1| hypothetical protein NCU01951 [Neurospora crassa OR74A]
gi|18150172|dbj|BAB83627.1| catalytic subunit of DNA polymerase zeta [Neurospora crassa]
gi|28926008|gb|EAA34999.1| hypothetical protein NCU01951 [Neurospora crassa OR74A]
Length = 1926
Score = 401 bits (1031), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/615 (37%), Positives = 343/615 (55%), Gaps = 75/615 (12%)
Query: 878 PVLEEMHQEADEMIS------TEPTPDLNGVTAIMHNEGHIAEPNACADCLQDI----SQ 927
P+LE +++ E + +P P V+ +E + P C I SQ
Sbjct: 840 PMLEAIYEAQQEECAMRGWEIADPPPSFKEVSNWWTDEQNDRNPKRCHSTPLRIKTYRSQ 899
Query: 928 ISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRYDSI 981
I+G TP ++ GF+ P + + ++ +S+EV +RG L PDP D +
Sbjct: 900 IAGV------TPKNKHGFEHPEKTKSESKQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEV 953
Query: 982 NVVALAFEND----------SDHAVEIYV-----LLYCKSESHQRSLVGIPDCKVFVCSK 1026
V ++ D A I V LL + H +P V +
Sbjct: 954 QCVFWYLRSEVNALRGTQTPDDTARGIIVFSEDSLLADRIRKH----TSVP---VVQETT 1006
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAA 1085
E+ + ++I+ + DPDI G+++ G S G+L ERA + L ++ SR +S
Sbjct: 1007 ELDMMVRMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRI 1066
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
G KDA D WG S + + GR ++N+WR MRGE
Sbjct: 1067 G-------------------------KDA---DRWGFNTTSSIRITGRHMINIWRAMRGE 1098
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
+ L YT+E V +L R+IP ++ L+ W+ S + + + Y + R +L++EI+ +
Sbjct: 1099 LNLLQYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILEK 1158
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
++I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L SP QV +Q A+E
Sbjct: 1159 NELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSPSRKQVGAQNALE 1218
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRP 1324
CLPLVMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++
Sbjct: 1219 CLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGRNKMGFMDYKR 1278
Query: 1325 DLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILH 1384
+L LKD + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + I
Sbjct: 1279 QEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDKDDRAI-Q 1337
Query: 1385 RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK 1444
++ N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW
Sbjct: 1338 QLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWD 1397
Query: 1445 AKVIYGDTDRYTVCI 1459
A V+YGDTD V +
Sbjct: 1398 ADVVYGDTDSLFVSL 1412
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FLRLRLNCIDHYQATPTRYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D + ++L K + G R +
Sbjct: 63 FPYLYVEYDGNLEPNKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|403161840|ref|XP_003322150.2| hypothetical protein PGTG_03687 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171949|gb|EFP77731.2| hypothetical protein PGTG_03687 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1748
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/552 (37%), Positives = 320/552 (57%), Gaps = 48/552 (8%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVV 984
+SQI GP + +Q+ + A+ + + +L+IEV A+S D RPDP D I V+
Sbjct: 838 VSQIEGPTQHNGGFKFTQV--KSSATVQESQHMDVLAIEVYADSTNDRRPDPASDQIKVL 895
Query: 985 ALAFE--------NDSDHAVEIYVLLYCK--------SESHQRSLVGIPDCKVFVCSKEI 1028
+ N +D + +++ + +E + + C + V E+
Sbjct: 896 FYCLKTERAGIELNRTDSGTRVGIIMVDEHQGNTPRTAEQLRLPKYALDQCCIEVVDTEV 955
Query: 1029 HLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDS 1088
L + I + +DP++L G++++ S G++ R L L+ ++ R ES
Sbjct: 956 ELLNSLIDKVRHWDPEVLTGFELESWSWGYVMRRGCELDFDLVYELGRVRFESH------ 1009
Query: 1089 EISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKL 1148
+ A +D+WG TH S + + GR VL++WR++R E+ L
Sbjct: 1010 ----------------------GRFAGKDDKWGYTHGSSIKITGRHVLSIWRIIRSELAL 1047
Query: 1149 NMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDM 1208
YT E V VLR + P F L KW+ G R R + Y + R +L++ ++ + ++
Sbjct: 1048 TQYTFENVVYHVLRTRTPHYSFSTLAKWWKDGTVEHRRRVLMYYIARVELDINLVEETEI 1107
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
I+R +E++R G+DFFS +SRGSQ++VES++ R++ +NY+ SP +VA Q A EC+P
Sbjct: 1108 ISRNAEISRTLGVDFFSAISRGSQFKVESVVFRISKPENYVLPSPSREEVAKQNAAECIP 1167
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE-NTLGVSSFRPDLH 1327
LVMEP+S FY P++VLDFQSLYPS+MIAYN C+ TCLG++ K N LG S
Sbjct: 1168 LVMEPQSAFYKSPLLVLDFQSLYPSIMIAYNYCYSTCLGRVSSFKGVNKLGTSILDLPDG 1227
Query: 1328 VLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIF 1387
+L+ +KD++++ PNG+M+V VRK +L ++L E L TR+M+KQ++ K S + L ++
Sbjct: 1228 LLKLMKDDIIVSPNGLMFVKHHVRKSLLSKMLSEFLDTRVMIKQSM-KFTKSDKALTKML 1286
Query: 1388 NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKV 1447
NARQL LK IANVTYGYT+A FSGRMPC E+AD+IVQ GR TLEK++ ++ ++W AKV
Sbjct: 1287 NARQLGLKFIANVTYGYTSASFSGRMPCVEIADAIVQTGRETLEKSMEVIHSVKEWGAKV 1346
Query: 1448 IYGDTDRYTVCI 1459
+YGDTD V +
Sbjct: 1347 VYGDTDSLFVYL 1358
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 51/187 (27%)
Query: 37 QGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCA------DIPVQLRQEDDGYMH 90
+G ++ +VPV+R++G+T AGQ+ H+H A+PY YV + +R+ +
Sbjct: 46 RGQQLYKVPVLRLFGATQAGQRVVAHVHGAMPYFYVQFDAGILPDTVHSYIRRLGAALNY 105
Query: 91 AISLALEKALKVKGSAGSKRQHVHECSLVRA----------------------------- 121
A + +L K K + + Q+V +L +
Sbjct: 106 ATAASLGKINKANPADRGRHQYVAYIALCKGIPFYGFHVGYRYFLKIYCVQPKFKKRMAE 165
Query: 122 -KKGGAVFDKS---------------LQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+ G V S + E HIPF LQF++D+NLYG G + LS FR
Sbjct: 166 LLRTGKVMSPSAYSQGDPAKGTRPGGFKVFEEHIPFHLQFMLDHNLYGCGWVELSNCAFR 225
Query: 166 HPVPDAF 172
P+PD +
Sbjct: 226 RPLPDNY 232
>gi|88604884|gb|ABD46762.1| REV3 [Neurospora crassa]
Length = 1926
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/615 (37%), Positives = 343/615 (55%), Gaps = 75/615 (12%)
Query: 878 PVLEEMHQEADEMIS------TEPTPDLNGVTAIMHNEGHIAEPNACADCLQDI----SQ 927
P+LE +++ E + +P P V+ +E + P C I SQ
Sbjct: 840 PMLEAIYEAQQEECAMRGWEIADPPPSFKEVSNWWTDEQNDRNPKRCHSTPLRIKTYRSQ 899
Query: 928 ISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRYDSI 981
I+G TP ++ GF+ P + + ++ +S+EV +RG L PDP D +
Sbjct: 900 IAGV------TPKNKHGFEHPEKTKSESKQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEV 953
Query: 982 NVVALAFEND----------SDHAVEIYV-----LLYCKSESHQRSLVGIPDCKVFVCSK 1026
V ++ D A I V LL + H +P V +
Sbjct: 954 QCVFWYLRSEVNALRGTQTPDDTARGIIVFSEDSLLADRIRKH----TSVP---VVQETT 1006
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAA 1085
E+ + ++I+ + DPDI G+++ G S G+L ERA + L ++ SR +S
Sbjct: 1007 ELDMMVRMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSN--- 1063
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
+ KDA D WG S + + GR ++N+WR MRGE
Sbjct: 1064 ----------------------GRIGKDA---DRWGFNTTSSIRITGRHMINIWRAMRGE 1098
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
+ L YT+E V +L R+IP ++ L+ W+ S + + + Y + R +L++EI+ +
Sbjct: 1099 LNLLQYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILEK 1158
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
++I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L SP QV +Q A+E
Sbjct: 1159 NELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSPSRKQVGAQNALE 1218
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRP 1324
CLPLVMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++
Sbjct: 1219 CLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGRNKMGFMDYKR 1278
Query: 1325 DLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILH 1384
+L LKD + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + I
Sbjct: 1279 QEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDKDDRAI-Q 1337
Query: 1385 RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK 1444
++ N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW
Sbjct: 1338 QLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWD 1397
Query: 1445 AKVIYGDTDRYTVCI 1459
A V+YGDTD V +
Sbjct: 1398 ADVVYGDTDSLFVSL 1412
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FLRLRLNCIDHYQATPTRYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D + ++L K + G R +
Sbjct: 63 FPYLYVEYDGNLEPNKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|310794043|gb|EFQ29504.1| DNA polymerase family B [Glomerella graminicola M1.001]
Length = 1722
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/553 (39%), Positives = 321/553 (58%), Gaps = 67/553 (12%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP TP ++ F+ P + + ++ +++E+ +RG L P+P
Sbjct: 849 LSQIDGP------TPKNRHAFKYPPKGKSTGVKHEAQYMSTMALEIHVNTRGKLVPNPDE 902
Query: 979 DSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI----PD------------CKVF 1022
D + + + + D + E+ L G+ PD +V
Sbjct: 903 DEVQCIFWSIKADG--------TVNSSQEAASGILAGVVVLSPDGGLAAKIRRYTPAEVV 954
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLES 1081
S E+ L ++I+ DPDIL G+++ G S G+L ERA L ++ SRT S
Sbjct: 955 EESSELDLMVRMVEIVRRHDPDILTGYEVHGSSWGYLIERARVKYDYDLCDEFSRTKSNS 1014
Query: 1082 KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRL 1141
G D WG S + V GR ++N+WR
Sbjct: 1015 HGRIGKEN----------------------------DRWGFNTTSTIRVTGRHMINIWRC 1046
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
MRGE+ L YT+E V VL R++P ++ LT+W+ S R + + Y +GR K +++
Sbjct: 1047 MRGELNLLQYTMENVVWHVLHRRMPHYSWKTLTEWYNSSKQRDLDKLLRYYLGRTKTDIQ 1106
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQ 1261
I+ ++I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N++ +SP QV Q
Sbjct: 1107 ILESNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGGQ 1166
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVS 1320
A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYNLC+ T LG+I+ + N +G +
Sbjct: 1167 NALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYNLCYSTFLGRIVNWRGMNKMGFT 1226
Query: 1321 SFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ 1380
++ +L LKD + I PNG+M+V P++RK +L ++L EIL TR+MVK +K+
Sbjct: 1227 EYQRHRRLLELLKDHINITPNGMMFVRPEIRKSLLAKMLGEILETRVMVKSGMKQ-DKDD 1285
Query: 1381 QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN 1440
+ L ++ N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI++++
Sbjct: 1286 KTLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAYIHSQ 1345
Query: 1441 EKWKAKVIYGDTD 1453
++W A+V+YGDTD
Sbjct: 1346 DRWGAEVVYGDTD 1358
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 97/198 (48%), Gaps = 40/198 (20%)
Query: 9 NIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
++F VR+ IDHY A P P Q + ++PV+RV+GST GQK C HIH
Sbjct: 2 DLFRVRLNCIDHYQATPTHYDPQLRNDVGPAQAKRGPKIPVVRVFGSTETGQKVCAHIHG 61
Query: 66 ALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA 121
A PYLYV + L E+ G Y++ + L+++ AL V + G + V +LV+
Sbjct: 62 AFPYLYV---EYQGSLEPEEVGAYIYRLHLSIDHALAVSYRRDQYGENAKFVARITLVKG 118
Query: 122 K------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ G + + QP+E+H+ +LLQF+ DYNL
Sbjct: 119 VPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVILKRKFQPYEAHLQYLLQFMTDYNL 178
Query: 152 YGMGHLHLSKLKFRHPVP 169
YG G+L +S + FR PVP
Sbjct: 179 YGCGYLDVSDVYFRAPVP 196
>gi|1304154|dbj|BAA11461.1| DNA polymerase [Mus musculus]
Length = 755
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/436 (47%), Positives = 278/436 (63%), Gaps = 31/436 (7%)
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 7 EKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 58
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R + D++G S +++ GRI LN+WR+MR EV
Sbjct: 59 DDKIENRFAAE-------------------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 99
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 100 GLTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 159
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 160 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPQC 219
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 220 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 279
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
+L ++ ++ + PNGV +V P VRKGVLPR+LEEIL TR+MVKQ++K + L
Sbjct: 280 VPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK-QDRAL 338
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ NARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW
Sbjct: 339 SRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 398
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 399 GARVVYGDTDSMFVLL 414
>gi|380093792|emb|CCC08756.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1959
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/550 (39%), Positives = 322/550 (58%), Gaps = 51/550 (9%)
Query: 926 SQISGPDGRSKPTPLSQIGF------QDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYD 979
SQ++G TP ++ GF + P+ + ++ +S+EV +RG L PDP D
Sbjct: 914 SQVAGA------TPKNKHGFRYSEKKKSPSVQHQAQYMSTMSLEVHVNTRGKLVPDPEED 967
Query: 980 SINVVALAFENDSDHAVEIY--------VLLYCKSESHQRSLVGIPDCKVFVCSKEIHLF 1031
+ V +D + E ++++ + + V + E+ +
Sbjct: 968 EVQCVFWCLRSDENVLRETQAPDNTVRGIVVFSEDGLLADKIQKYTSVPVVQETTELDVM 1027
Query: 1032 SHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEI 1090
++I+ + DPDI G+++ G S G+L ERA L ++ SR +S
Sbjct: 1028 LRMVEIVRNHDPDIFTGYEVHGTSWGYLIERARIKYDFDLCDEFSRMKSQSN-------- 1079
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
+ KDA D WG S + + GR ++N+WR MRGE+ L
Sbjct: 1080 -----------------GRIGKDA---DRWGFNTTSSIRITGRHMINIWRAMRGELNLLQ 1119
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
YT+E V +L R+IP ++ L+ W+ SG + + + Y + R +L++EI+ + ++I
Sbjct: 1120 YTMENVVWHLLHRRIPHYNWKTLSDWYLSGLPKDLNKVLRYYLTRTRLDIEILEKNELIA 1179
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L ISP QV +Q A+ECLPLV
Sbjct: 1180 RTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLISPSRKQVGAQNALECLPLV 1239
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVL 1329
MEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++ +L
Sbjct: 1240 MEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGTNKMGFMDYKRQEGLL 1299
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
LKD + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + L ++
Sbjct: 1300 SLLKDYINISPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQ-DKDDKALQQLLKN 1358
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIY 1449
RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW A+V+Y
Sbjct: 1359 RQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWDAEVVY 1418
Query: 1450 GDTDRYTVCI 1459
GDTD V +
Sbjct: 1419 GDTDSLFVYL 1428
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 92/197 (46%), Gaps = 38/197 (19%)
Query: 9 NIFSVRIVSIDHYMAP-----PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
++F VR+ IDHY A P G D+ +S K ++PVIRV+GST GQK C HI
Sbjct: 2 DVFRVRLNCIDHYQATRTEYDPQFGQDVRFS--HSRKPPKLPVIRVFGSTETGQKVCAHI 59
Query: 64 HRALPYLYVPCAD---------------------IPVQLRQE--DDGYMHAISLALEKAL 100
H A PYLYV + V R++ D ++ + L K +
Sbjct: 60 HGAFPYLYVEYDGSLEVIKANEYISKFRASIDHALAVSYRKDPLHDRPLYVARITLTKGI 119
Query: 101 KVKGSAGSKRQH--------VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLY 152
G R + V LV + G + + QP+E+H+ +LLQF+ DYNLY
Sbjct: 120 PFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLY 179
Query: 153 GMGHLHLSKLKFRHPVP 169
G +L + + FR PVP
Sbjct: 180 GCDYLDAAMVTFRAPVP 196
>gi|336264642|ref|XP_003347097.1| hypothetical protein SMAC_05396 [Sordaria macrospora k-hell]
Length = 1947
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/550 (39%), Positives = 322/550 (58%), Gaps = 51/550 (9%)
Query: 926 SQISGPDGRSKPTPLSQIGF------QDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYD 979
SQ++G TP ++ GF + P+ + ++ +S+EV +RG L PDP D
Sbjct: 902 SQVAGA------TPKNKHGFRYSEKKKSPSVQHQAQYMSTMSLEVHVNTRGKLVPDPEED 955
Query: 980 SINVVALAFENDSDHAVEIY--------VLLYCKSESHQRSLVGIPDCKVFVCSKEIHLF 1031
+ V +D + E ++++ + + V + E+ +
Sbjct: 956 EVQCVFWCLRSDENVLRETQAPDNTVRGIVVFSEDGLLADKIQKYTSVPVVQETTELDVM 1015
Query: 1032 SHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEI 1090
++I+ + DPDI G+++ G S G+L ERA L ++ SR +S
Sbjct: 1016 LRMVEIVRNHDPDIFTGYEVHGTSWGYLIERARIKYDFDLCDEFSRMKSQSN-------- 1067
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
+ KDA D WG S + + GR ++N+WR MRGE+ L
Sbjct: 1068 -----------------GRIGKDA---DRWGFNTTSSIRITGRHMINIWRAMRGELNLLQ 1107
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
YT+E V +L R+IP ++ L+ W+ SG + + + Y + R +L++EI+ + ++I
Sbjct: 1108 YTMENVVWHLLHRRIPHYNWKTLSDWYLSGLPKDLNKVLRYYLTRTRLDIEILEKNELIA 1167
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L ISP QV +Q A+ECLPLV
Sbjct: 1168 RTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLISPSRKQVGAQNALECLPLV 1227
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVL 1329
MEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++ +L
Sbjct: 1228 MEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGTNKMGFMDYKRQEGLL 1287
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
LKD + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + L ++
Sbjct: 1288 SLLKDYINISPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQ-DKDDKALQQLLKN 1346
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIY 1449
RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW A+V+Y
Sbjct: 1347 RQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWDAEVVY 1406
Query: 1450 GDTDRYTVCI 1459
GDTD V +
Sbjct: 1407 GDTDSLFVYL 1416
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 92/185 (49%), Gaps = 26/185 (14%)
Query: 9 NIFSVRIVSIDHYMAP-----PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
++F VR+ IDHY A P G D+ +S K ++PVIRV+GST GQK C HI
Sbjct: 2 DVFRVRLNCIDHYQATRTEYDPQFGQDVRFS--HSRKPPKLPVIRVFGSTETGQKVCAHI 59
Query: 64 HRALPYLYVPCAD---------IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH 112
H A PYLYV + V R++ D ++ + L K + G R +
Sbjct: 60 HGAFPYLYVEYDGSLEVIKDHALAVSYRKDPLHDRPLYVARITLTKGIPFYGFHVGYRFY 119
Query: 113 --------VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKF 164
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + + F
Sbjct: 120 LKIYLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCDYLDAAMVTF 179
Query: 165 RHPVP 169
R PVP
Sbjct: 180 RAPVP 184
>gi|336463563|gb|EGO51803.1| hypothetical protein NEUTE1DRAFT_125454 [Neurospora tetrasperma FGSC
2508]
Length = 1928
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/611 (37%), Positives = 343/611 (56%), Gaps = 67/611 (10%)
Query: 878 PVLEEMHQEADEMIS------TEPTPDLNGVTAIMHNEGHIAEPNACADCLQDI----SQ 927
P+LE +++ E + +P P V+ ++ P C I SQ
Sbjct: 840 PMLEAIYEAQQEECAMRGWEIADPPPSFKEVSDWWTDKQKDRNPKRCHFTPLKIETYRSQ 899
Query: 928 ISGPDGRSKPTPLSQIGFQDP------ASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++G TP + GF+ P ++ + ++ +S+EV +RG L PDP D +
Sbjct: 900 VAGV------TPKKKHGFEHPEKTKPESAQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEV 953
Query: 982 NVVALAFEND----------SDHAVEIYVLLYCKSESHQ-RSLVGIPDCKVFVCSKEIHL 1030
V ++ D A I V S + + R +P V + E+ +
Sbjct: 954 QCVFWYLRSEVNALRGTQAPDDTARGIVVFSEDGSLADRIRKHTSVP---VVQETTELDM 1010
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSE 1089
++I+ + DPDI G+++ G S G+L ERA + L ++ SR +S
Sbjct: 1011 MVRMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSN------- 1063
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
+ KDA D WG S + + GR ++N+WR MRGE+ L
Sbjct: 1064 ------------------GRIGKDA---DRWGFNTTSSIRITGRHMINIWRAMRGELNLL 1102
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
YT+E V +L R+IP ++ L+ W+ S + + + Y + R +L+LEI+ + ++I
Sbjct: 1103 QYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDLEILEKNELI 1162
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L SP QV +Q A+ECLPL
Sbjct: 1163 PRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPL 1222
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHV 1328
VMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++ +
Sbjct: 1223 VMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGRNKMGFMDYKRQEGL 1282
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L LKD + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + I ++ N
Sbjct: 1283 LSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDKDDKAI-QQLLN 1341
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW A+V+
Sbjct: 1342 NRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWDAEVV 1401
Query: 1449 YGDTDRYTVCI 1459
YGDTD V +
Sbjct: 1402 YGDTDSLFVSL 1412
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FIRLRLNCIDHYQATPTGYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D + + L K + G R +
Sbjct: 63 FPYLYVEYDGNLEPNKDHALAISYRKDPIRDRPKYVARITLTKGIPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAIATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|88604888|gb|ABD46764.1| REV3 [Neurospora crassa]
Length = 1926
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/615 (37%), Positives = 343/615 (55%), Gaps = 75/615 (12%)
Query: 878 PVLEEMHQEADEMIS------TEPTPDLNGVTAIMHNEGHIAEPNACADCLQDI----SQ 927
P+LE +++ E + +P P V+ +E + P C SQ
Sbjct: 840 PMLEAIYEAQQEECAMRGWEIADPPPSFKEVSNWWTDEQNDRNPKRCHSTPLRFKTYRSQ 899
Query: 928 ISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRYDSI 981
I+G TP ++ GF+ P + + ++ +S+EV +RG L PDP D +
Sbjct: 900 IAGV------TPKNRHGFEHPEKTKSESKQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEV 953
Query: 982 NVVALAFEND----------SDHAVEIYV-----LLYCKSESHQRSLVGIPDCKVFVCSK 1026
V ++ D A I V LL + H +P V +
Sbjct: 954 QCVFWYLRSEVNALCGTQAPDDTARGIIVFSEDSLLADRIRKH----TSVP---VVQETT 1006
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAA 1085
E+ + ++I+ + DPDI G+++ G S G+L ERA + L ++ SR +S
Sbjct: 1007 ELDMMVRMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRI 1066
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
G KDA D WG S + + GR ++N+WR MRGE
Sbjct: 1067 G-------------------------KDA---DRWGFNTTSSIRITGRHMINIWRAMRGE 1098
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
+ L YT+E V +L R+IP ++ L+ W+ S + + + Y + R +L++EI+ +
Sbjct: 1099 LNLLQYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILEK 1158
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
++I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L SP QV +Q A+E
Sbjct: 1159 NELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSPSRKQVGAQNALE 1218
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRP 1324
CLPLVMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++
Sbjct: 1219 CLPLVMEPQSAFYSSPLIVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGTNKMGFMDYKR 1278
Query: 1325 DLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILH 1384
+L LKD + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + I
Sbjct: 1279 QEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDKDDRAI-Q 1337
Query: 1385 RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK 1444
++ N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW
Sbjct: 1338 QLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWD 1397
Query: 1445 AKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 1398 AEVVYGDTDSLFVSL 1412
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FLRLRLNCIDHYQATPTRYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D + ++L K + G R +
Sbjct: 63 FPYLYVEYDGNLEPSKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|212544614|ref|XP_002152461.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
marneffei ATCC 18224]
gi|210065430|gb|EEA19524.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
marneffei ATCC 18224]
Length = 1655
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/542 (40%), Positives = 315/542 (58%), Gaps = 61/542 (11%)
Query: 935 SKPTPLSQI---------GF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRYD 979
SKP +SQI GF Q S Q ++++S+EV +R L P+P D
Sbjct: 792 SKPNVMSQIDGATQKNPYGFKYSQKQQSTSVNHQTQYMSVMSLEVHVNTREGLAPNPEED 851
Query: 980 SINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILC 1039
I+V +D V + L + ++ + E+ L + + I+
Sbjct: 852 EISVHLGILAQPADVLVPVAASLSVEIQTE---------------ASELDLITSLVDIVR 896
Query: 1040 SFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEISERGITDN 1098
+ DPDI+ G+++ GS G+L ERA L N++SR
Sbjct: 897 NHDPDIITGYEVHNGSWGYLIERARVKYEYDLCNELSRVK-------------------- 936
Query: 1099 MLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAE 1158
A KD+ D WG + S + V GR ++N+WR MR E+ L YT+E V
Sbjct: 937 -----ASAHGRFGKDS---DRWGFNNTSSISVTGRHMINIWRAMRSELNLLGYTMENVVF 988
Query: 1159 TVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARV 1218
+L R+IP PF+ LT+WF R + VEY + R +L+LEI++ ++I RTSE AR+
Sbjct: 989 HLLHRRIPHYPFKDLTRWFTGSKPRNIMKVVEYYLSRVQLDLEILDTNELIPRTSEQARL 1048
Query: 1219 FGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFY 1278
G+DFFSV SRGSQ++VES++ R+A +N++ ISP QV Q A+ECLPLVMEP+S FY
Sbjct: 1049 LGVDFFSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGQQNALECLPLVMEPQSDFY 1108
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDELL 1337
P++VLDFQSLYPS++IAYN C+ T LG++ + +G + ++ +L LKD +
Sbjct: 1109 TSPLLVLDFQSLYPSIIIAYNYCYSTFLGRLDNWRGRGKMGFTEYKRQERILELLKDHVN 1168
Query: 1338 IPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLI 1397
I PNG++Y P++RK +L R+L EIL TR+MVK +K + L ++ N RQLALK+I
Sbjct: 1169 IAPNGMIYAKPEIRKSLLARMLSEILETRVMVKSGMKA-DKDDKTLQQLLNHRQLALKMI 1227
Query: 1398 ANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTV 1457
ANVTYGYT+A FSGRMPC+E+ADSIVQ R TLE+AI+F++ ++W A+V+YGDTD +
Sbjct: 1228 ANVTYGYTSASFSGRMPCSEIADSIVQTARETLERAIAFIHSVDRWGAEVVYGDTDSLFI 1287
Query: 1458 CI 1459
+
Sbjct: 1288 SL 1289
Score = 97.4 bits (241), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 40/199 (20%)
Query: 9 NIFSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
+IF VR+ IDHY A PP+P + Q +VPVIR +G+T GQK C H
Sbjct: 2 DIFRVRLNCIDHYQAVPTEFDPPVP---FTNGASQRTARPKVPVIRAFGATETGQKVCAH 58
Query: 63 IHRALPYLYVPCA------DIPVQLRQEDDGYMHAIS-----------------LALEKA 99
+H A PYLY+ ++ +R HA++ ++L K
Sbjct: 59 VHGAFPYLYIEYRGGLGQDEVNNAIRNLHASIDHALANSYRQNAYDGRVAYVAHISLVKG 118
Query: 100 LKVKGSAGSKRQH-----VHECSLVRAK---KGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ G R + ++ +++R + GAV LQP+ESH+ F+ Q++ DYNL
Sbjct: 119 VPFYGYHVGYRFYLKIYLLNPMNIIRLADLLRQGAVMKTMLQPYESHLQFIPQWMCDYNL 178
Query: 152 YGMGHLHLSKLKFRHPVPD 170
YG ++ +K+KFR PVP+
Sbjct: 179 YGCAYMDCAKVKFRSPVPE 197
>gi|88604882|gb|ABD46761.1| REV3 [Neurospora crassa]
Length = 1926
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 235/611 (38%), Positives = 340/611 (55%), Gaps = 72/611 (11%)
Query: 879 VLEEMHQEADEMISTE---PTPDLNGVTAIMHNEGHIAEPNACADCLQDI----SQISGP 931
V+ E QE M E P P V+ +E + P C I SQI+G
Sbjct: 844 VIYEAQQEECAMRGWEIADPPPSFKEVSNWWTDEQNDRNPKRCHSTPLRIKTYRSQIAGV 903
Query: 932 DGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRYDSINVVA 985
TP + GF+ P + + ++ +S+EV +RG L PDP D + V
Sbjct: 904 ------TPKIKHGFEHPEKTKSESKQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEVQCVF 957
Query: 986 LAFEND----------SDHAVEIYV-----LLYCKSESHQRSLVGIPDCKVFVCSKEIHL 1030
++ D A I V LL + H +P V + E+ +
Sbjct: 958 WYLRSEVNALRGTQTPDDTARGIIVFSEDSLLADRIRKH----TSVP---VVQETTELDM 1010
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSE 1089
++I+ + DPDI G+++ G S G+L ERA + L ++ SR +S G
Sbjct: 1011 MVRMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIG--- 1067
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
KDA D WG S + + GR ++N+WR MRGE+ L
Sbjct: 1068 ----------------------KDA---DRWGFNTTSSIRITGRHMINIWRAMRGELNLL 1102
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
YT+E V +L R+IP ++ L+ W+ S + + + Y + R +L++EI+ + ++I
Sbjct: 1103 QYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILEKNELI 1162
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L SP QV +Q A+ECLPL
Sbjct: 1163 PRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPL 1222
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHV 1328
VMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++ +
Sbjct: 1223 VMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGRNKMGFMDYKRQEGL 1282
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L LKD + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + I ++ N
Sbjct: 1283 LSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDMDDRAI-QQLLN 1341
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW A+V+
Sbjct: 1342 NRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWDAEVV 1401
Query: 1449 YGDTDRYTVCI 1459
YGDTD V +
Sbjct: 1402 YGDTDSLFVSL 1412
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FLRLRLNCIDHYQATPTRYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D + ++L K + G R +
Sbjct: 63 FPYLYVEYDGNLEPNKDHALAISYRKDPIRDRPKYVTRISLTKGIPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|326426951|gb|EGD72521.1| DNA polymerase zeta catalytic subunit [Salpingoeca sp. ATCC 50818]
Length = 2703
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/526 (42%), Positives = 318/526 (60%), Gaps = 48/526 (9%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSD---HAVEIYVLLYCKSE--SH 1009
+ LTLLS+E+ A+SRG + DP +D I + +D + AV+ V+ + S
Sbjct: 1860 QHLTLLSLELMADSRGQKQSDPEFDPILALFCVVHDDQEPTASAVKKVVMTHRTSSQAGA 1919
Query: 1010 QRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIG 1069
+++G+ V + E + FI+ L + DPD+++G++IQ GS G+L +R LG+
Sbjct: 1920 TSAMLGLRRVDVIEKNSEREMLDTFIEWLQTLDPDLIIGYEIQMGSWGYLIQRGQVLGLD 1979
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
++ ++ S S G D+ +E+G H S
Sbjct: 1980 MV---------VLLSRTPSTSSSSGFKDD-----------------TTNEYGARHTSEFR 2013
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GR++LN+WRL+R E+ L Y+ E V +L R++P+ + L W+ + R+R
Sbjct: 2014 IVGRVILNLWRLLRHELALTSYSFENVMFHILHRRVPAYSQQQLRNWYHNTHAPLRWRVC 2073
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
++++ RA L++M +++ I RTSE AR+FGI F+ V+SRGSQ+RVES++LR+AH +N++
Sbjct: 2074 KHLLFRALSCLQLMYEINFIERTSEFARLFGILFYEVISRGSQFRVESIMLRIAHPRNFI 2133
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
ISP QV +Q A E LPL++EPES FY+ PV+VLDFQSLYPSMMIAYN+CF TCLG++
Sbjct: 2134 MISPSKDQVRNQRAPEALPLILEPESKFYSSPVLVLDFQSLYPSMMIAYNICFSTCLGRV 2193
Query: 1310 LPSKE--------------NTLGVSSFRPDLHVLRDLKDELL--IPPNGVMYVPPKVRKG 1353
+ GVS F +L DL D+ L I PNGVM+ ++R G
Sbjct: 2194 PGTATRRAAYGDGDAGGSGTKFGVSHFDLPPGLLSDLVDQDLVHICPNGVMFCKRELRGG 2253
Query: 1354 VLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRM 1413
VLP +L+EIL TRIMVKQ++K+ S Q +HR+ NARQL LKLIANVTYGYT+A FSGRM
Sbjct: 2254 VLPVMLDEILRTRIMVKQSMKESDVS-QAMHRLMNARQLGLKLIANVTYGYTSATFSGRM 2312
Query: 1414 PCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
PC ++ADSIVQ R TL +A+ V N KW AKV+YGDTD V +
Sbjct: 2313 PCVDIADSIVQSARETLTRAMRMVETNPKWNAKVVYGDTDSMFVLL 2358
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
FS+RI+ D + P IP D YS + + PVIRV+G+TP GQK C H+H PY
Sbjct: 151 FFSIRIIDADFQVRPSIPQLDEVYSVFRCCPLPRAPVIRVFGTTPRGQKACCHVHGVYPY 210
Query: 70 LYVP 73
+YVP
Sbjct: 211 IYVP 214
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 125 GAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPD 170
G + + QP E+HIP+ LQF+ DYNL GM ++H FR P+P+
Sbjct: 346 GVIGNIFYQPFEAHIPYFLQFMTDYNLQGMNYIHTKHALFRTPLPE 391
>gi|425783247|gb|EKV21104.1| DNA polymerase [Penicillium digitatum Pd1]
Length = 1698
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 318/540 (58%), Gaps = 41/540 (7%)
Query: 925 ISQISGPDGR-SKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINV 983
+SQI GP + + SQ G A + ++ +S+EV +RG L P+P D I
Sbjct: 820 LSQIEGPTQKNAHGFKYSQHGVSTSVEHQA-QHMSTMSLEVHVNTRGILLPNPEEDEITS 878
Query: 984 VALAFENDSDH--------AVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFI 1035
+ +++ + V + ++ + + E + + V E+ L + I
Sbjct: 879 LFWCIQSEDEDVEVNSHLPGVHVGMVYHGEGERPEAKISKALTIDVECEPTELDLINRLI 938
Query: 1036 KILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEISERG 1094
++ +DPDI+ G+++ S G++ ERA + ++SRT +S G
Sbjct: 939 DLVRYYDPDIITGYEVHNASWGYVIERARKKYDFDICEELSRTKSQSNGRFG-------- 990
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
K+A D WG ++S + + GR + N+WR M+GE+ L YT+E
Sbjct: 991 -----------------KEA---DSWGFNNSSSIRITGRHMFNIWRAMKGELNLLQYTME 1030
Query: 1155 AVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSE 1214
V +L R+IP R LT+W+ SG R + VEY R +LNLEI+ ++ RTSE
Sbjct: 1031 NVVFHILHRRIPHYSPRDLTQWYQSGKPRNLLKVVEYFTSRVQLNLEILEASELTPRTSE 1090
Query: 1215 LARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPE 1274
AR+ GIDF SV+SRGSQ++VES++ R+A +N+L +SP QV Q A+ECLPLV+EP+
Sbjct: 1091 QARLLGIDFASVISRGSQFKVESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVLEPQ 1150
Query: 1275 SGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLK 1333
S FY P++VLDFQSLYPS+MIAYN C+ T LG+ + + + +G ++ +L LK
Sbjct: 1151 SDFYTSPLLVLDFQSLYPSVMIAYNYCYSTFLGRAMHWRGRDKMGFMDYKRQPRLLELLK 1210
Query: 1334 DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLA 1393
D++ I PNG+MY + R+ +L ++L EIL TR+MVK +K ++L R+ N RQLA
Sbjct: 1211 DKINISPNGMMYAKQEARQSLLAKMLSEILETRVMVKNGMKA-DKDDKVLQRLLNNRQLA 1269
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
LKLIANVTYGYT+A FSGRMPCAE+ADSIVQ GR TLEKAI+F++ E+W A+V+YGDTD
Sbjct: 1270 LKLIANVTYGYTSASFSGRMPCAEIADSIVQTGRETLEKAIAFIHSIERWGAEVVYGDTD 1329
Score = 97.4 bits (241), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 48/201 (23%)
Query: 11 FSVRIVSIDHYMA------PPIP-GYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
F VR+ IDHY A PP+P Y++ + +VPVIR++G+T GQ+ C+H+
Sbjct: 4 FRVRLNYIDHYQATASELDPPLPFRYEVSEKHFRP----KVPVIRIFGATETGQRVCVHV 59
Query: 64 HRALPYLYVPCADIPVQLRQED-DGYMHAISLALEKALKV--KGSAGSKRQ--------- 111
H A PYLY+ + L ED + + + L+++ AL V + +A +R
Sbjct: 60 HGAFPYLYI---EYNGSLAPEDVNSAIRTLHLSIDHALAVSFRRNAYDRRTAFVAHITLV 116
Query: 112 --------HV--------------HECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDY 149
HV H LV GAV + LQP+E+H+ ++ Q++ DY
Sbjct: 117 KGVPFYGYHVGWRFFFKIYLLSPFHITRLVDLLHQGAVMKRPLQPYEAHVQYIPQWMYDY 176
Query: 150 NLYGMGHLHLSKLKFRHPVPD 170
NLYG + S++KFR PVP+
Sbjct: 177 NLYGCATMSCSQVKFRAPVPE 197
>gi|425780984|gb|EKV18966.1| DNA polymerase [Penicillium digitatum PHI26]
Length = 1678
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 318/540 (58%), Gaps = 41/540 (7%)
Query: 925 ISQISGPDGR-SKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINV 983
+SQI GP + + SQ G A + ++ +S+EV +RG L P+P D I
Sbjct: 820 LSQIEGPTQKNAHGFKYSQHGVSTSVEHQA-QHMSTMSLEVHVNTRGILLPNPEEDEITS 878
Query: 984 VALAFENDSDH--------AVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFI 1035
+ +++ + V + ++ + + E + + V E+ L + I
Sbjct: 879 LFWCIQSEDEDVEVNSHLPGVHVGMVYHGEGERPEAKISKALTIDVECEPTELDLINRLI 938
Query: 1036 KILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEISERG 1094
++ +DPDI+ G+++ S G++ ERA + ++SRT +S G
Sbjct: 939 DLVRYYDPDIITGYEVHNASWGYVIERARKKYDFDICEELSRTKSQSNGRFG-------- 990
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
K+A D WG ++S + + GR + N+WR M+GE+ L YT+E
Sbjct: 991 -----------------KEA---DSWGFNNSSSIRITGRHMFNIWRAMKGELNLLQYTME 1030
Query: 1155 AVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSE 1214
V +L R+IP R LT+W+ SG R + VEY R +LNLEI+ ++ RTSE
Sbjct: 1031 NVVFHILHRRIPHYSPRDLTQWYQSGKPRNLLKVVEYFTSRVQLNLEILEASELTPRTSE 1090
Query: 1215 LARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPE 1274
AR+ GIDF SV+SRGSQ++VES++ R+A +N+L +SP QV Q A+ECLPLV+EP+
Sbjct: 1091 QARLLGIDFASVISRGSQFKVESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVLEPQ 1150
Query: 1275 SGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLK 1333
S FY P++VLDFQSLYPS+MIAYN C+ T LG+ + + + +G ++ +L LK
Sbjct: 1151 SDFYTSPLLVLDFQSLYPSVMIAYNYCYSTFLGRAMHWRGRDKMGFMDYKRQPRLLELLK 1210
Query: 1334 DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLA 1393
D++ I PNG+MY + R+ +L ++L EIL TR+MVK +K ++L R+ N RQLA
Sbjct: 1211 DKINISPNGMMYAKQEARQSLLAKMLSEILETRVMVKNGMKA-DKDDKVLQRLLNNRQLA 1269
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
LKLIANVTYGYT+A FSGRMPCAE+ADSIVQ GR TLEKAI+F++ E+W A+V+YGDTD
Sbjct: 1270 LKLIANVTYGYTSASFSGRMPCAEIADSIVQTGRETLEKAIAFIHSIERWGAEVVYGDTD 1329
Score = 97.4 bits (241), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 48/201 (23%)
Query: 11 FSVRIVSIDHYMA------PPIP-GYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
F VR+ IDHY A PP+P Y++ + +VPVIR++G+T GQ+ C+H+
Sbjct: 4 FRVRLNYIDHYQATASELDPPLPFRYEVSEKHFRP----KVPVIRIFGATETGQRVCVHV 59
Query: 64 HRALPYLYVPCADIPVQLRQED-DGYMHAISLALEKALKV--KGSAGSKRQ--------- 111
H A PYLY+ + L ED + + + L+++ AL V + +A +R
Sbjct: 60 HGAFPYLYI---EYNGSLAPEDVNSAIRTLHLSIDHALAVSFRRNAYDRRTAFVAHITLV 116
Query: 112 --------HV--------------HECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDY 149
HV H LV GAV + LQP+E+H+ ++ Q++ DY
Sbjct: 117 KGVPFYGYHVGWRFFFKIYLLSPFHITRLVDLLHQGAVMKRPLQPYEAHVQYIPQWMYDY 176
Query: 150 NLYGMGHLHLSKLKFRHPVPD 170
NLYG + S++KFR PVP+
Sbjct: 177 NLYGCATMSCSQVKFRAPVPE 197
>gi|350297217|gb|EGZ78194.1| hypothetical protein NEUTE2DRAFT_101866 [Neurospora tetrasperma FGSC
2509]
Length = 1925
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/615 (37%), Positives = 347/615 (56%), Gaps = 75/615 (12%)
Query: 878 PVLEEMHQEADEMIS------TEPTPDLNGVTAIMHNEGHIAEPNACADCLQDI----SQ 927
P+LE +++ E + +P P V+ +E P C I SQ
Sbjct: 840 PMLEAIYEAQQEECAMRGWELADPPPSFKEVSDWWTDEQKDRNPKRCHFTPLRIKTYRSQ 899
Query: 928 ISGPDGRSKPTPLSQIGFQDP---ASAGAGEQ---LTLLSIEVQAESRGDLRPDPRYDSI 981
++G TP ++ GF+ P S A +Q ++ +S+EV +RG L PDP D +
Sbjct: 900 VAGV------TPKNKHGFEHPEKTKSESAQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEV 953
Query: 982 NVVALAFEND----------SDHAVEIYV-----LLYCKSESHQRSLVGIPDCKVFVCSK 1026
V ++ D A I V LL + H +P V +
Sbjct: 954 QCVFWYLRSEVNALRGTQTPDDTARGIVVFSEDGLLADRIRKH----TSVP---VVQETT 1006
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAA 1085
E+ + ++I+ S DPDI G+++ G S G+L ERA + L ++ SR +S
Sbjct: 1007 ELDMMVRMVEIVRSHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSN--- 1063
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
+ KDA D WG S + + GR ++N+WR MRG+
Sbjct: 1064 ----------------------GRIGKDA---DRWGFNTTSSIRITGRHMINIWRAMRGK 1098
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
+ L YT+E V +L R+IP ++ L+ W+ S + + + Y + R +L++EI+ +
Sbjct: 1099 LNLLQYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILEK 1158
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
++I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L SP QV +Q A+E
Sbjct: 1159 NELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLASPSRKQVGAQNALE 1218
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRP 1324
CLPLVMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + +N +G ++
Sbjct: 1219 CLPLVMEPQSAFYSCPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGKNKMGFMDYKR 1278
Query: 1325 DLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILH 1384
+L LK+ + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ +++
Sbjct: 1279 QEGLLSLLKNYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQ-DKDDKVIQ 1337
Query: 1385 RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK 1444
++ N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW
Sbjct: 1338 QLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWD 1397
Query: 1445 AKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 1398 AEVVYGDTDSLFVSL 1412
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FLRLRLNCIDHYQATSTGYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D ++ + L K + G R +
Sbjct: 63 FPYLYVEYDGNLEPDKDHALAISYRKDPIRDRPIYVARITLTKGIPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|242813002|ref|XP_002486077.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714416|gb|EED13839.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1672
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/507 (40%), Positives = 303/507 (59%), Gaps = 37/507 (7%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSD------HAVEIYVLLYCKSES 1008
+ ++++S+EV +R L P+P D I+ V + +D + H +++ + +
Sbjct: 820 QYMSVMSLEVHVNTRESLAPNPEEDEISCVFWSLRSDDEDVDVNSHLEGVHLGILAQPAD 879
Query: 1009 HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLG 1067
+ +V + E+ L + + I+ S DPDI+ G+++ S G+L ERA
Sbjct: 880 VLVPVAASLSIEVQTEASELDLITSLVDIVRSHDPDIITGYEVHNSSWGYLIERARVKYE 939
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
L N++SR A KD+ D WG H S
Sbjct: 940 YDLCNELSRVK-------------------------TSAHGRFGKDS---DRWGFNHTSS 971
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ V GR ++N+WR MR E+ L YT+E V +L R+IP PFR LT+WF R +
Sbjct: 972 ISVTGRHMINIWRAMRSELTLLGYTMENVVFHLLHRRIPHYPFRELTRWFTGSKPRDMMK 1031
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
+EY + R +L+LEI++ ++I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N
Sbjct: 1032 VMEYYLSRVQLDLEILDTNELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPEN 1091
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
++ ++P QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS++IAYN C+ T LG
Sbjct: 1092 FMLVTPSRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIIIAYNYCYSTFLG 1151
Query: 1308 KILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTR 1366
++ + +G + +L LKD + I PNG++Y P++RK +L R+L EIL TR
Sbjct: 1152 RLDNWRGRGKMGFMEYERQERILELLKDHVNIAPNGMIYAKPEIRKSLLARMLSEILETR 1211
Query: 1367 IMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
+MVK +K + L ++ N RQLALK+IANVTYGYT+A FSGRMPC+E+ADSIVQ
Sbjct: 1212 VMVKSGMKA-DKDDKTLQQLLNHRQLALKMIANVTYGYTSASFSGRMPCSEIADSIVQTA 1270
Query: 1427 RSTLEKAISFVNENEKWKAKVIYGDTD 1453
R TLE+ I+F++ ++W A+V+YGDTD
Sbjct: 1271 RETLERTIAFIHSVDQWDAEVVYGDTD 1297
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 40/199 (20%)
Query: 9 NIFSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
+ F VR+ ID Y A PP+P + Q +VPVIR +G+T GQK C+H
Sbjct: 2 DTFRVRLNCIDDYQAVPTEFDPPVP---FAAGASQRTARPKVPVIRAFGATETGQKVCVH 58
Query: 63 IHRALPYLYVPCA------DIPVQLRQEDDGYMHAIS-----------------LALEKA 99
IH A PYLY+ ++ +R HA++ ++L K
Sbjct: 59 IHGAFPYLYIEYRGGLGQDEVNDAIRNLHKSIDHALANSYRHNAYDGRVAYVAHISLVKG 118
Query: 100 LKVKGSAGSKRQHV-----HECSLVRAK---KGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ G R ++ + +++R + GAV LQP+ESH+ F+ Q++ DYNL
Sbjct: 119 IPFYGYHVGYRYYLKIYLLNPLNIIRLADLLRQGAVMKYPLQPYESHLQFIPQWMCDYNL 178
Query: 152 YGMGHLHLSKLKFRHPVPD 170
YG ++ +K KFR PVP+
Sbjct: 179 YGCAYMDCAKAKFRSPVPE 197
>gi|78523225|gb|ABB46350.1| UPR1 [Neurospora tetrasperma]
Length = 1926
Score = 398 bits (1023), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/615 (37%), Positives = 343/615 (55%), Gaps = 75/615 (12%)
Query: 878 PVLEEMHQEADEMIS------TEPTPDLNGVTAIMHNEGHIAEPNACADCLQDI----SQ 927
P+LE +++ E + +P P V+ +E + P C I SQ
Sbjct: 840 PMLEAIYEAQQEECAMRGWEIADPPPSFKEVSNWWTDEQNNRNPKRCHSTPLRIKTYRSQ 899
Query: 928 ISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRYDSI 981
I+G TP ++ GF+ P + + ++ +S+EV +RG L PDP D +
Sbjct: 900 IAGV------TPKNKHGFEHPEKTKSESKQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEV 953
Query: 982 NVVALAFEND----------SDHAVEIYV-----LLYCKSESHQRSLVGIPDCKVFVCSK 1026
V ++ D A I V LL + H +P V +
Sbjct: 954 QCVFWYLRSEVNALRGTQTPDDTARGIVVFSEDGLLADRIRKH----TSVP---VVQETT 1006
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAA 1085
E+ + ++I+ + DPDI G+++ G S G+L ERA + L ++ SR +S
Sbjct: 1007 ELDMMVRMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYDLDLCDEFSRMKSQSN--- 1063
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
+ KD D WG S + + GR ++N+WR MRGE
Sbjct: 1064 ----------------------GRIGKDV---DRWGFNTTSSIRITGRHMINIWRAMRGE 1098
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
+ L YT+E V +L R+IP ++ L+ W+ S + + + Y + R +L++EI+ +
Sbjct: 1099 LNLLQYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILEK 1158
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
++I RTSE R+ G+DFFSV SRGSQ++VES++ R+A +N+L SP QV +Q A+E
Sbjct: 1159 NELIPRTSEQVRLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLASPSRKQVGAQNALE 1218
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRP 1324
CLPLVMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + +N +G ++
Sbjct: 1219 CLPLVMEPQSAFYSCPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGKNKMGFMDYKR 1278
Query: 1325 DLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILH 1384
+L LKD + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + I
Sbjct: 1279 QEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDKDDRAI-Q 1337
Query: 1385 RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK 1444
++ N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW
Sbjct: 1338 QLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWD 1397
Query: 1445 AKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 1398 AEVVYGDTDSLFVSL 1412
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FLRLRLNCIDHYQATSTGYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D ++ + L K + G R +
Sbjct: 63 FPYLYVEYDGNLEPNKDHALAISYRKDPIRDRPIYVARITLTKGIPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|388579508|gb|EIM19831.1| hypothetical protein WALSEDRAFT_58541 [Wallemia sebi CBS 633.66]
Length = 1504
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/541 (39%), Positives = 318/541 (58%), Gaps = 56/541 (10%)
Query: 926 SQISGPDGRSKPTPLSQIGFQDPASAGAGE------------QLTLLSIEVQAESRGDLR 973
+QI GP R K F AS +GE Q+T++ +EV A++ G+
Sbjct: 652 TQIEGPPSRQK--------FGLDASTASGEKNHIPREHDIQTQITMMIVEVFAKNIGNKV 703
Query: 974 PDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSH 1033
P+P ++ + + F++ D V++ +++ + + + + E L
Sbjct: 704 PNPEHNPVEAIFWVFQSSDDEVESGMVVVEGETK------YKLNETNMEIAINEADLIFT 757
Query: 1034 FIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISER 1093
I + FDPDIL GWD + GS G+L +RA + IGL E+SE
Sbjct: 758 LIDKVQEFDPDILAGWDTELGSWGYLVDRA-RIEIGL------------------ELSE- 797
Query: 1094 GITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTV 1153
E +S ++ +W + GR V NVWRL R E+ L T
Sbjct: 798 --------ETSRVKSRTMRNITGGQKWAEMKTTTFTSPGRHVFNVWRLARSELSLPQTTF 849
Query: 1154 EAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTS 1213
E V+ +VL++++P LT+W+ SG + R +E R K+ +I+N ++ I +T+
Sbjct: 850 EHVSHSVLKKRLPKYTSETLTRWWTSGNVSSYARVLELFSLRVKMIGDILNSMETITKTA 909
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E AR G+DF+SV++RGSQ++VE+++ R+A +NY+ ISP +QV+ Q A E LPLVMEP
Sbjct: 910 EFARTIGVDFYSVITRGSQFKVEALMFRIAKPENYVLISPSRNQVSGQQAAEALPLVMEP 969
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN-TLGVSSFRPDLHVLRDL 1332
+S FY DP++VLDFQSLYPS+M+AYN C+ TCLG++ P + + LG++ VL L
Sbjct: 970 QSAFYKDPIIVLDFQSLYPSIMLAYNYCYSTCLGRVKPYEGHYKLGITEHTTSSKVLDSL 1029
Query: 1333 KDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
KD++ PNG+MYV P VRK +L ++L E+L TRIM+KQ++++ + L ++ +ARQL
Sbjct: 1030 KDDINFAPNGMMYVKPHVRKSLLSKMLAELLDTRIMIKQSMQE-NREDKYLRKLQHARQL 1088
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDT 1452
+LKL+ANVTYGYT+A FSGRMPC ELADSIVQ GR TLE+AI F++ N++W A V+YGDT
Sbjct: 1089 SLKLMANVTYGYTSASFSGRMPCVELADSIVQTGRETLERAIRFIDNNKEWGADVVYGDT 1148
Query: 1453 D 1453
D
Sbjct: 1149 D 1149
Score = 90.9 bits (224), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 41/195 (21%)
Query: 13 VRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
+RI ++D+ + PI +D SS + P++RV+G GQ C H+H PY Y+
Sbjct: 3 IRITNLDYNLFKPINYFDDNLSSFSDLPLANSPILRVFGRLDTGQMACAHVHGVYPYFYI 62
Query: 73 PCAD--IPVQLRQEDDGYMHAISLALEKALKV----------------------KGS--- 105
P ++R Y+H + L++ ++L + KG+
Sbjct: 63 EYKHSVTPEKVRD----YIHQLGLSINQSLSLSLRRNMNDKQSTTQFLRAIVICKGTPFY 118
Query: 106 ---AGSK-------RQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMG 155
G++ H LV+ + G + + + Q +ESH P+LLQF DYNLYG
Sbjct: 119 GYNVGTRPFLKIIMNDPKHIPRLVQLMESGQLMNTTFQAYESHAPYLLQFFTDYNLYGCD 178
Query: 156 HLHLSKLKFRHPVPD 170
+ +S+ KFR P+PD
Sbjct: 179 WMQVSQAKFRLPLPD 193
>gi|78523223|gb|ABB46349.1| UPR1 [Neurospora tetrasperma]
Length = 1926
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 231/615 (37%), Positives = 343/615 (55%), Gaps = 75/615 (12%)
Query: 878 PVLEEMHQEADEMIS------TEPTPDLNGVTAIMHNEGHIAEPNACADCLQDI----SQ 927
P+LE +++ E + +P P V+ +E + P C I SQ
Sbjct: 840 PMLEAIYEAQQEECAMRGWEIADPPPSFKEVSNWWTDEQNDRNPKRCHFTPLRIKTYRSQ 899
Query: 928 ISGPDGRSKPTPLSQIGFQDP------ASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
I+G TP ++ GF+ P + + ++ +S+EV +RG L PDP D +
Sbjct: 900 IAGV------TPKNKHGFEHPEKTKSESKQNQAQYMSAMSLEVHVNTRGKLVPDPEEDEV 953
Query: 982 NVVALAFEND----------SDHAVEIYV-----LLYCKSESHQRSLVGIPDCKVFVCSK 1026
V L ++ D A I V LL + H +P V +
Sbjct: 954 QCVFLYLRSEVNALRGTQTPDDTARGIIVFSEDSLLADRIRKH----TSVP---VVQETT 1006
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAA 1085
E+ + ++I+ + DPDI G+++ G S G+L ERA + L ++ SR +S
Sbjct: 1007 ELDMMVRMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSN--- 1063
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
+ KDA D WG S + + GR ++N+WR MRGE
Sbjct: 1064 ----------------------GRIGKDA---DRWGFNTTSSIRITGRHMINIWRAMRGE 1098
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
+ L YT+E V +L R+IP + L+ W+ S + + + Y + R +L++EI+ +
Sbjct: 1099 LNLLQYTMENVVWHLLHRRIPHYSWMTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILEK 1158
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
++I RTSE AR+ G+DFFSV+SRGSQ++VES++ R+A + +L SP QV +Q A+E
Sbjct: 1159 NELIPRTSEQARLLGVDFFSVVSRGSQFKVESIMFRIAKPEKFLLASPSRKQVGAQNALE 1218
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRP 1324
CLPLVMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + +N +G ++
Sbjct: 1219 CLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGKNKMGFMDYKR 1278
Query: 1325 DLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILH 1384
+L LKD + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + I
Sbjct: 1279 QEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDKDDKAI-Q 1337
Query: 1385 RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK 1444
++ N RQLALKL+ANV YGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ KW
Sbjct: 1338 QLLNNRQLALKLLANVNYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVRKWD 1397
Query: 1445 AKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 1398 AEVVYGDTDSLFVSL 1412
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FLRLRLNCIDHYQATSTGYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D + + L K + G R +
Sbjct: 63 SPYLYVEYDGNLEPDKDHALAISYRKDPIRDRPKYVARITLTKGIPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|88866509|gb|ABD57304.1| REV3 [Neurospora crassa]
Length = 1581
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/545 (40%), Positives = 318/545 (58%), Gaps = 59/545 (10%)
Query: 938 TPLSQIGFQDP------ASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND 991
TP + GF+ P ++ + ++ +S+EV +RG L PDP D + V ++
Sbjct: 904 TPQKKHGFEHPEKTKPESAQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYLRSE 963
Query: 992 ----------SDHAVEIYV-----LLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIK 1036
D A I V LL + H +P V + E+ + ++
Sbjct: 964 VNALGGTQAPDDTARGIVVFSEDDLLADRIRKH----TSVP---VVQETTELDMMVRMVE 1016
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGI 1095
I+ + DPDI G+++ G S G+L ERA + L ++ SR +S G
Sbjct: 1017 IVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIG--------- 1067
Query: 1096 TDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEA 1155
KDA D WG S + + GR ++N+WR MRGE+ L YT+E
Sbjct: 1068 ----------------KDA---DRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMEN 1108
Query: 1156 VAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSEL 1215
V +L R+IP ++ L+ W+ S + + + Y + R +L++EI+ + ++I RTSE
Sbjct: 1109 VVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILEKNELIPRTSEQ 1168
Query: 1216 ARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPES 1275
AR+ G+DFFSV SRGSQ++VES++ R+A +N+L SP QV +Q A+ECLPLVMEP+S
Sbjct: 1169 ARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQS 1228
Query: 1276 GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKD 1334
FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++ +L LKD
Sbjct: 1229 AFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGRNKMGFMDYKRQEGLLSLLKD 1288
Query: 1335 ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLAL 1394
+ I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + I ++ N RQLAL
Sbjct: 1289 YINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDKDDRAI-QQLLNNRQLAL 1347
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDR 1454
KL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW A V+YGDTD
Sbjct: 1348 KLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWDADVVYGDTDS 1407
Query: 1455 YTVCI 1459
V +
Sbjct: 1408 LFVSL 1412
Score = 101 bits (251), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FLRLRLNCIDHYQATPTRYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D + ++L K + G R +
Sbjct: 63 FPYLYVEYDGNLEPNKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|307203010|gb|EFN82226.1| DNA polymerase zeta catalytic subunit [Harpegnathos saltator]
Length = 1867
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/540 (40%), Positives = 308/540 (57%), Gaps = 57/540 (10%)
Query: 940 LSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIY 999
+S Q+ + + LTLLS+EV +R DL PDP+YDSI + A ND V
Sbjct: 1146 VSNENLQNVRAVAVHQYLTLLSLEVHVITREDLLPDPQYDSIVALFYAIHNDPPPDV--- 1202
Query: 1000 VLLYCKSESHQRSLVGIPDCKVFVCSKEIH----------------LFSHFIKILCSFDP 1043
SE + + + C V +IH +F++ +K++ +P
Sbjct: 1203 ------SEQIEHGAIIVNPCPVSARLNKIHSASAMCLITYVATEQDVFNNLVKLIEQHNP 1256
Query: 1044 DILMGWDIQGGSLGFLAERAAHLGI-GLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
D+L+GW+++ S G++ +RA+HL + G IS+ P + ++ R
Sbjct: 1257 DVLIGWEVESLSWGYVFQRASHLALNGFPLRISKVPY---VQIPSNKFDAR--------- 1304
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
+ KD + E + V GR +L+VWR+MR E L YT E V VL
Sbjct: 1305 ------MFEKDDMSE----------IKVPGRNILDVWRIMRHEAALLTYTFENVMHHVLH 1348
Query: 1163 RKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGID 1222
+IP FR L+ W+ + R + + + R + L+I++ LD+I RT E AR+FGI
Sbjct: 1349 ERIPCPSFRTLSTWWKHESMTMKCRVIHHYIIRVRGTLKILSHLDVIGRTCEHARLFGIQ 1408
Query: 1223 FFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPV 1282
F+ V SRGSQ+RVESM+LRLA NY+ ISP HQ A A ECLPL+MEPES FY DP+
Sbjct: 1409 FYEVFSRGSQFRVESMMLRLAKPMNYIPISPSIHQRAKMRAPECLPLIMEPESKFYVDPL 1468
Query: 1283 VVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN---TLGVSSFRPDLHVLRDLKDELLIP 1339
+VLDFQSLYPSM+IAYN CF TCLG+I + G ++ R L+D++
Sbjct: 1469 IVLDFQSLYPSMIIAYNYCFSTCLGRIEHIGQYGPFDFGAATLRVTKSRTLKLQDKMNFS 1528
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIAN 1399
P GV +V +VR+G++PR+L EIL+TR+MVK+++K + L R+ +++QL LKLIAN
Sbjct: 1529 PCGVAFVKKEVRQGIMPRMLMEILNTRLMVKESMKLHPAENRTLQRVLHSQQLGLKLIAN 1588
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
VTYGYT+A FSGRMPC E+ DS+V GR TLE+AI V KW A+V+YGDTD V +
Sbjct: 1589 VTYGYTSANFSGRMPCIEIGDSVVSKGRETLERAIKLVESTPKWGARVVYGDTDSLFVLL 1648
Score = 141 bits (355), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 36/187 (19%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FS+ +V+ID Y A PIP +D+ +S +G ++N+VPVIR++GST G+KTCLH+H PY
Sbjct: 1 MFSITLVNIDSYQASPIPEFDVTFSEFRGSEINKVPVIRIFGSTAIGKKTCLHVHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
+YVPC +++ D + + ++ +++ AL GS S QHV++ V
Sbjct: 61 IYVPCT-----VQENMDSFAYQLAASIDSALNTSFGSTLSTNQHVYKIQRVSGIPFYGYH 115
Query: 122 -KK----------------------GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
KK G V ++ Q +E+HIP++LQF++DYNLYGM ++
Sbjct: 116 EKKHLFFKIYFYNPAIIKRITDLLQNGVVLNQHFQSYEAHIPYILQFMIDYNLYGMNVIN 175
Query: 159 LSKLKFR 165
L+ +K+R
Sbjct: 176 LNNIKYR 182
>gi|88604878|gb|ABD46759.1| REV3 [Neurospora crassa]
Length = 1926
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/611 (37%), Positives = 340/611 (55%), Gaps = 67/611 (10%)
Query: 878 PVLEEMHQEADEMIS------TEPTPDLNGVTAIMHNEGHIAEPNACADCLQDI----SQ 927
P+LE +++ E + +P P V+ ++ P C + SQ
Sbjct: 840 PMLEAIYEAQQEECAMRGWEIADPPPSFKEVSDWWTDKQKDRNPERCHFTPLKVQTYRSQ 899
Query: 928 ISGPDGRSKPTPLSQIGFQDP------ASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++G TP + GF+ P ++ + ++ +S+EV +RG L PDP D +
Sbjct: 900 VAGV------TPKKKHGFEHPEKTKPESAQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEV 953
Query: 982 NVV---------ALAFENDSDHAVEIYVLLYCKS--ESHQRSLVGIPDCKVFVCSKEIHL 1030
V AL D ++ S R +P V + E+ +
Sbjct: 954 QCVFWYLRSEVNALRGTQTPDDTARGIIVFSEDSLLADRIRKHTSVP---VVQETTELDM 1010
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSE 1089
++I+ + DPDI G+++ G S G+L ERA + L ++ SR +S G
Sbjct: 1011 MVRMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIG--- 1067
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
KDA D WG S + + GR ++N+WR MRGE+ L
Sbjct: 1068 ----------------------KDA---DRWGFNTTSSIRITGRHMINIWRAMRGELNLL 1102
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
YT+E V +L R+IP ++ L+ W+ S + + + Y + R +L++EI+ + ++I
Sbjct: 1103 QYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILEKNELI 1162
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L SP QV +Q A+ECLPL
Sbjct: 1163 PRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPL 1222
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHV 1328
VMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++ +
Sbjct: 1223 VMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGRNKMGFMDYKRQEGL 1282
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L LKD + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + I ++ N
Sbjct: 1283 LSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDKDDRAI-QQLLN 1341
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW A+V+
Sbjct: 1342 NRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWDAEVV 1401
Query: 1449 YGDTDRYTVCI 1459
YGDTD V +
Sbjct: 1402 YGDTDSLFVSL 1412
Score = 100 bits (248), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FLRLRLNCIDHYQATPTRYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D + ++L K G R +
Sbjct: 63 FPYLYVEYDGDLEPNKDHALAISYRKDPIRDRPKYVARISLTKGTPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQHGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|402084632|gb|EJT79650.1| hypothetical protein GGTG_04734 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1144
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/538 (40%), Positives = 324/538 (60%), Gaps = 43/538 (7%)
Query: 925 ISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRY 978
+SQI GP TP GF Q SA + ++ +S+E+ +R L PDP
Sbjct: 183 LSQIEGP------TPRDGHGFKYSQRKKSASVQHEVQYMSTMSMELHVNTRERLVPDPEE 236
Query: 979 DSINVVALAFEND-SDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKI 1037
D + ++ ++D + V+ V++ + R + ++ + E+ L +++
Sbjct: 237 DEVKLIFWCLKSDGASGGVQSGVIVLSEDGRLGRRMRHQVSGQLVEEASELELMLRMVEL 296
Query: 1038 LCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGIT 1096
+ + DPDIL G+++ GGS G+L ERA L ++ SR +S
Sbjct: 297 VRTHDPDILTGYEVHGGSWGYLVERARLKYDYDLCDEFSRMKSQS--------------- 341
Query: 1097 DNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAV 1156
+ AK A D WG S L V GR ++N+WR MRGE+ L Y++E V
Sbjct: 342 ---------SHGRYAKGA---DRWGFRTTSALRVTGRHMINIWRAMRGELSLQQYSMENV 389
Query: 1157 AETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELA 1216
+L R+IP + LT W+ +G R + V Y R +L+LEI+++ ++++RTSE A
Sbjct: 390 VWHLLHRRIPHYAYETLTDWYRNGWHRDLDKLVRYWQTRVRLDLEILDENELVSRTSEQA 449
Query: 1217 RVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESG 1276
R+ G+DFFSV SRGSQ++VES++ R+A +++L SP QV +Q A+ECLPLVMEP+S
Sbjct: 450 RLLGVDFFSVFSRGSQFKVESIMFRIAKPESFLLPSPSRQQVGAQNALECLPLVMEPQSA 509
Query: 1277 FYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDE 1335
FY PVVVLDFQSLYPS+MIAYN C+ T LG+I+ + N +G +++R +L L+D
Sbjct: 510 FYTSPVVVLDFQSLYPSVMIAYNYCYSTFLGRIVDWRGANKMGFANYRRRRRLLELLQDH 569
Query: 1336 LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALK 1395
+ I PNGVMY +RK +L ++L EIL TR+MVK +++ + L R+ N RQLALK
Sbjct: 570 INIAPNGVMYTKATIRKSLLAKMLTEILETRVMVKSGMRQ-DKEDRALQRLLNNRQLALK 628
Query: 1396 LIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
L+ANVTYGYT+A FSGR+PC+E+ADSIVQ GR TLE+AI+F++ ++W A+V+YGDTD
Sbjct: 629 LLANVTYGYTSASFSGRLPCSEIADSIVQTGRETLERAITFIHSVQRWGAEVVYGDTD 686
>gi|255944163|ref|XP_002562849.1| Pc20g02960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587584|emb|CAP85625.1| Pc20g02960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1697
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/546 (39%), Positives = 319/546 (58%), Gaps = 41/546 (7%)
Query: 925 ISQISGPDGR-SKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINV 983
+SQI GP + + SQ G A + ++ +S+EV +RG L P+P D I
Sbjct: 820 LSQIEGPTQKNAHGFKYSQNGVSTSVEHQA-QHMSTMSLEVHVNTRGTLMPNPEEDEITS 878
Query: 984 VALAFENDSDH--------AVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFI 1035
+ +++ + V + ++ + + E + + V E+ L + I
Sbjct: 879 LFWCIQSEDEDIEVNSHLPGVHVGMVYHGEGERPEAKISKALTIDVEHEPTELDLINRLI 938
Query: 1036 KILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEISERG 1094
I+ +DPDI+ G+++ S G++ ERA + ++SRT +S G
Sbjct: 939 DIVRYYDPDIITGYEVHNASWGYVIERARKKYDFDICEELSRTKSQSNGRFG-------- 990
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
K+A D+WG H+S + + GR + N+WR M+ E+ L YT+E
Sbjct: 991 -----------------KEA---DQWGFNHSSSIRITGRHMFNIWRAMKSELNLLQYTME 1030
Query: 1155 AVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSE 1214
V VL R+IP + LT+W SG R + V+Y R ++NLEI+ ++ RTSE
Sbjct: 1031 NVVFHVLHRRIPHYSPKHLTQWHQSGRPRNILKVVQYFTSRVQMNLEILEANELTPRTSE 1090
Query: 1215 LARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPE 1274
AR+ GIDF SV++RGSQ++VES++ R+A +N+L +SP QV Q A+ECLPLVMEP+
Sbjct: 1091 QARLLGIDFASVITRGSQFKVESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVMEPQ 1150
Query: 1275 SGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLK 1333
S FY P++VLDFQSLYPS+MIAYN C+ T LG+ + + + +G ++ +L LK
Sbjct: 1151 SDFYTSPLLVLDFQSLYPSVMIAYNYCYSTFLGRAMHWRGRDKMGFIDYKRQPRILELLK 1210
Query: 1334 DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLA 1393
D++ I PNG+MY + R+ +L ++L EIL TR+MVK +K ++L R+ N RQLA
Sbjct: 1211 DKINIAPNGMMYAKQEARQSLLAKMLSEILETRVMVKNGMKA-DKDDKVLQRLLNNRQLA 1269
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
LKLIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+F++ E+W A+V+YGDTD
Sbjct: 1270 LKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIAFIHSVERWGAEVVYGDTD 1329
Query: 1454 RYTVCI 1459
V +
Sbjct: 1330 SLFVYL 1335
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 46/202 (22%)
Query: 11 FSVRIVSIDHYMA------PPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
F VR+ IDHY A PP+ D KV PVIR++G+T GQ+ C+H+H
Sbjct: 4 FRVRLNCIDHYQATASELDPPLLFRDEVSEKDFKPKV---PVIRIFGATETGQRVCVHVH 60
Query: 65 RALPYLYVPCADIPVQLRQED-DGYMHAISLALEKALKV--KGSAGSKRQ---------- 111
A PYLY+ + L ED + + + L+++ AL V + +A +R
Sbjct: 61 GAFPYLYI---EYNGSLAPEDVNSAIRTLHLSIDHALAVSFRRNAYDRRTAFVAHITLVK 117
Query: 112 -------HV--------------HECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYN 150
HV H LV GAV + LQP+E+H+ ++ Q++ DYN
Sbjct: 118 GVPFYGYHVGWRFFFKIYLLNPFHMTRLVDLLHQGAVMKRPLQPYEAHVQYIPQWMCDYN 177
Query: 151 LYGMGHLHLSKLKFRHPVPDAF 172
LYG + S+ KFR PVP+ F
Sbjct: 178 LYGCAIMSCSQAKFRAPVPEYF 199
>gi|68236020|gb|AAY88346.1| REV3 [Neurospora crassa]
Length = 1926
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/545 (40%), Positives = 318/545 (58%), Gaps = 59/545 (10%)
Query: 938 TPLSQIGFQDP------ASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND 991
TP + GF+ P ++ + ++ +S+EV +RG L PDP D + V ++
Sbjct: 904 TPQKKHGFEHPEKTKPESAQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYLRSE 963
Query: 992 ----------SDHAVEIYV-----LLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIK 1036
D A I V LL + H +P V + E+ + ++
Sbjct: 964 VNALGGTQAPDDTARGIVVFSEDDLLADRIRKH----TSVP---VVQETTELDMMVRMVE 1016
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGI 1095
I+ + DPDI G+++ G S G+L ERA + L ++ SR +S G
Sbjct: 1017 IVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIG--------- 1067
Query: 1096 TDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEA 1155
KDA D WG S + + GR ++N+WR MRGE+ L YT+E
Sbjct: 1068 ----------------KDA---DRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMEN 1108
Query: 1156 VAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSEL 1215
V +L R+IP ++ L+ W+ S + + + Y + R +L++EI+ + ++I RTSE
Sbjct: 1109 VVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILEKNELIPRTSEQ 1168
Query: 1216 ARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPES 1275
AR+ G+DFFSV SRGSQ++VES++ R+A +N+L SP QV +Q A+ECLPLVMEP+S
Sbjct: 1169 ARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQS 1228
Query: 1276 GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKD 1334
FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++ +L LKD
Sbjct: 1229 AFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGRNKMGFMDYKRQEGLLSLLKD 1288
Query: 1335 ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLAL 1394
+ I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + I ++ N RQLAL
Sbjct: 1289 YINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDKDDRAI-QQLLNNRQLAL 1347
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDR 1454
KL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW A V+YGDTD
Sbjct: 1348 KLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWDADVVYGDTDS 1407
Query: 1455 YTVCI 1459
V +
Sbjct: 1408 LFVSL 1412
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FLRLRLNCIDHYQATPTRYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D + ++L K + G R +
Sbjct: 63 FPYLYVEYDGNLEPNKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|86196720|gb|EAQ71358.1| hypothetical protein MGCH7_ch7g765 [Magnaporthe oryzae 70-15]
Length = 1736
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/562 (38%), Positives = 328/562 (58%), Gaps = 52/562 (9%)
Query: 909 EGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSI 962
+ H A P + + +SQI G TP ++ GF Q + + ++ +SI
Sbjct: 818 KSHPASPQSTQLARRQLSQIEGA------TPKNKHGFRYSQKQKTTSVQHEVAYMSTMSI 871
Query: 963 EVQAESRGDLRPDPRYDSINVVALAFEND---------SDHAVEIYVLLYCKSESHQRSL 1013
E+ +RG L PDP D + + +D + ++ V++ + + +
Sbjct: 872 EIHVNTRGKLVPDPEKDEVKCIFWCVRSDDKSNEASSQAPDGLQSGVVVLSEEGTLAERI 931
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL-GIGLLN 1072
++ + E+ L ++I+ + DPDIL G+++ GGS G+L ERA + L +
Sbjct: 932 KHQIKGELLEETSELDLMVRMVEIVRTHDPDILTGYEVHGGSWGYLIERARCMYDYNLCD 991
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ SR +S G KDA D WG S + V G
Sbjct: 992 EFSRMKSQSHGRYG-------------------------KDA---DRWGFNTTSTIRVTG 1023
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R ++N+WR MRGE+ L YT+E V +L R+IP ++ LT W+ SG + + Y
Sbjct: 1024 RHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWQTLTTWYGSGRHGDLDKLLRYY 1083
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
R +L++EI+ + +I+RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N++ +S
Sbjct: 1084 QTRTRLDIEILEENGLISRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVS 1143
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P QV Q A+ECLPLVMEP+S FY PV+VLDFQSLYPS+MIAYN C+ T LG+I+
Sbjct: 1144 PSRKQVGGQNALECLPLVMEPQSAFYNSPVLVLDFQSLYPSVMIAYNYCYSTFLGRIVDW 1203
Query: 1313 K-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ N +G + +R +L L++ + I PNGVMY P++RK +L ++L EIL TR+MVK
Sbjct: 1204 RGTNKMGFAEYRRRKRLLELLQEHINIAPNGVMYTKPEIRKSLLAKMLTEILETRVMVKS 1263
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K+ + L ++ N RQLALKL+ANVTYGYT+A FSGR+PC+E+ADSIVQ GR TLE
Sbjct: 1264 GMKQ-DKDDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRLPCSEIADSIVQTGRETLE 1322
Query: 1432 KAISFVNENEKWKAKVIYGDTD 1453
+AI+F++ +W A+V+YGDTD
Sbjct: 1323 RAIAFIHSVPRWGAEVVYGDTD 1344
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 43/200 (21%)
Query: 9 NIFSVRIVSIDHYMAPPIPGYDICYSS----LQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
++F VR+ IDHY A P YD C + Q K +VPVIRV+GST GQK C HIH
Sbjct: 2 DVFKVRLNCIDHYQATPT-QYDPCLRNDVRHSQLFKEPKVPVIRVFGSTQTGQKVCAHIH 60
Query: 65 RALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKVK----GSAGSKRQHVHECSLV 119
A PYL++ + +L QE+ G + + + L+++ AL V A ++V +LV
Sbjct: 61 GAFPYLFI---EYNGKLDQEEVGAFSYRLHLSIDHALAVSYRQDAYARDTPKYVARITLV 117
Query: 120 RAK------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDY 149
+ G + + QP+E+H+ ++LQF+ DY
Sbjct: 118 KGVPFYGFHVGYKYYLKIYMLNPVVMTRLADLLHQGVIMKRKFQPYEAHLQYILQFMTDY 177
Query: 150 NLYGMGHLHLSKLKFRHPVP 169
NLYG G++ S +KFR PVP
Sbjct: 178 NLYGCGYIEASSVKFRAPVP 197
>gi|157124378|ref|XP_001660448.1| DNA polymerase zeta catalytic subunit [Aedes aegypti]
gi|108874011|gb|EAT38236.1| AAEL009851-PA [Aedes aegypti]
Length = 2080
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/520 (41%), Positives = 313/520 (60%), Gaps = 46/520 (8%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND--SDHAVEIYVLLYCKSESHQRSLV 1014
LT++S+EV ++RG+LRP+P D I+ + ND DH V + H +
Sbjct: 1239 LTIMSVEVHIQTRGELRPNPEIDPISAIFYRIHNDVPEDHRRAPSVCGIILNHEHGLAAT 1298
Query: 1015 GIPD----------CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
D V S E L+ F+ ++ +DPDI G++I+ S G++ +R
Sbjct: 1299 DRLDPYKYNKCNYMADVVTVSNERELYEKFLMLISFWDPDIFAGYEIEQASWGYIIQRGY 1358
Query: 1065 HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
L + L+ +SR P K+ V+E + + + +
Sbjct: 1359 SLEMNLMKMLSRVPTAEKVH--------------------VSEEEEQELLEMHE-----Y 1393
Query: 1125 ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRA 1184
++GL + GRI+L++WRLMR E+ L YT E + +L R++ F+ LT+ + +
Sbjct: 1394 SAGLKIPGRILLDIWRLMRHEIALTSYTFENIVFHILHRRVSCHAFKQLTRLW--NKPYS 1451
Query: 1185 RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
++ +EY + R NLE+++QLD+I RT+ELA++FGI F+ VLSRGSQ+RVESM+LR+A
Sbjct: 1452 KWIVLEYYLERVNGNLELLHQLDLIGRTAELAKLFGIQFYEVLSRGSQFRVESMMLRIAK 1511
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
+N++++SP Q A A E LPL++EPES FYADP++VLDFQSLYPSM+IAYN CF T
Sbjct: 1512 PRNFVSVSPSIQQRAHMRAPEYLPLILEPESRFYADPLIVLDFQSLYPSMIIAYNYCFST 1571
Query: 1305 CLGKIL---PSKENTLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLL 1359
CLG++ S+ G S R +L+ L K+ + I P G+ +V VR+G+LPR+L
Sbjct: 1572 CLGRVEHLGQSEPFEFGASHLRLSPRMLKVLVEKNLITISPCGIAFVKSSVREGILPRML 1631
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
EIL+TR+MVK ++ KL IL R+ ++RQL LKLIANVTYGYTAA FSGRMPC E+
Sbjct: 1632 NEILTTRLMVKGSM-KLHKENSILQRVLHSRQLGLKLIANVTYGYTAANFSGRMPCVEVG 1690
Query: 1420 DSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDR-YTVC 1458
DS+V GR TLE+AI V +E+W AKV+YGDTD + +C
Sbjct: 1691 DSVVSKGRETLERAIKMVETSERWGAKVVYGDTDSLFVLC 1730
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 96/180 (53%), Gaps = 32/180 (17%)
Query: 9 NIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALP 68
++ S+RIVS+DHYM P P +D CYS +G V +VPVIR++GST G +C+HIH P
Sbjct: 8 HVTSIRIVSVDHYMHKPEPRFDTCYSEFRGSNVKQVPVIRLFGSTADGTHSCVHIHGVFP 67
Query: 69 YLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------ 121
YLYVP D R D M+ I+ +L+KA+ V G+A S HV +LV+
Sbjct: 68 YLYVPF-DGNTADRTAVDRLMYQIASSLDKAINVSLGNANSAATHVFRIALVKGIPIYGY 126
Query: 122 ------------------KKG------GAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHL 157
+K G + + Q ESH+P++LQF +DYNLYGM L
Sbjct: 127 HRKEHQFFKIYMYNPYLIRKANNLLMNGVILSRVFQTFESHVPYILQFFIDYNLYGMSLL 186
>gi|389646163|ref|XP_003720713.1| DNA polymerase zeta catalytic subunit [Magnaporthe oryzae 70-15]
gi|351638105|gb|EHA45970.1| DNA polymerase zeta catalytic subunit [Magnaporthe oryzae 70-15]
gi|440468549|gb|ELQ37705.1| DNA polymerase zeta catalytic subunit [Magnaporthe oryzae Y34]
gi|440481173|gb|ELQ61787.1| DNA polymerase zeta catalytic subunit [Magnaporthe oryzae P131]
Length = 1782
Score = 395 bits (1015), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/562 (38%), Positives = 328/562 (58%), Gaps = 52/562 (9%)
Query: 909 EGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQ---LTLLSI 962
+ H A P + + +SQI G TP ++ GF Q + + ++ +SI
Sbjct: 818 KSHPASPQSTQLARRQLSQIEGA------TPKNKHGFRYSQKQKTTSVQHEVAYMSTMSI 871
Query: 963 EVQAESRGDLRPDPRYDSINVVALAFEND---------SDHAVEIYVLLYCKSESHQRSL 1013
E+ +RG L PDP D + + +D + ++ V++ + + +
Sbjct: 872 EIHVNTRGKLVPDPEKDEVKCIFWCVRSDDKSNEASSQAPDGLQSGVVVLSEEGTLAERI 931
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL-GIGLLN 1072
++ + E+ L ++I+ + DPDIL G+++ GGS G+L ERA + L +
Sbjct: 932 KHQIKGELLEETSELDLMVRMVEIVRTHDPDILTGYEVHGGSWGYLIERARCMYDYNLCD 991
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ SR +S G KDA D WG S + V G
Sbjct: 992 EFSRMKSQSHGRYG-------------------------KDA---DRWGFNTTSTIRVTG 1023
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R ++N+WR MRGE+ L YT+E V +L R+IP ++ LT W+ SG + + Y
Sbjct: 1024 RHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWQTLTTWYGSGRHGDLDKLLRYY 1083
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
R +L++EI+ + +I+RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N++ +S
Sbjct: 1084 QTRTRLDIEILEENGLISRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVS 1143
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P QV Q A+ECLPLVMEP+S FY PV+VLDFQSLYPS+MIAYN C+ T LG+I+
Sbjct: 1144 PSRKQVGGQNALECLPLVMEPQSAFYNSPVLVLDFQSLYPSVMIAYNYCYSTFLGRIVDW 1203
Query: 1313 K-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ N +G + +R +L L++ + I PNGVMY P++RK +L ++L EIL TR+MVK
Sbjct: 1204 RGTNKMGFAEYRRRKRLLELLQEHINIAPNGVMYTKPEIRKSLLAKMLTEILETRVMVKS 1263
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K+ + L ++ N RQLALKL+ANVTYGYT+A FSGR+PC+E+ADSIVQ GR TLE
Sbjct: 1264 GMKQ-DKDDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRLPCSEIADSIVQTGRETLE 1322
Query: 1432 KAISFVNENEKWKAKVIYGDTD 1453
+AI+F++ +W A+V+YGDTD
Sbjct: 1323 RAIAFIHSVPRWGAEVVYGDTD 1344
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 43/200 (21%)
Query: 9 NIFSVRIVSIDHYMAPPIPGYDICYSS----LQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
++F VR+ IDHY A P YD C + Q K +VPVIRV+GST GQK C HIH
Sbjct: 2 DVFKVRLNCIDHYQATPT-QYDPCLRNDVRHSQLFKEPKVPVIRVFGSTQTGQKVCAHIH 60
Query: 65 RALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKVK----GSAGSKRQHVHECSLV 119
A PYL++ + +L QE+ G + + + L+++ AL V A ++V +LV
Sbjct: 61 GAFPYLFI---EYNGKLDQEEVGAFSYRLHLSIDHALAVSYRQDAYARDTPKYVARITLV 117
Query: 120 RAK------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDY 149
+ G + + QP+E+H+ ++LQF+ DY
Sbjct: 118 KGVPFYGFHVGYKYYLKIYMLNPVVMTRLADLLHQGVIMKRKFQPYEAHLQYILQFMTDY 177
Query: 150 NLYGMGHLHLSKLKFRHPVP 169
NLYG G++ S +KFR PVP
Sbjct: 178 NLYGCGYIEASSVKFRAPVP 197
>gi|328866324|gb|EGG14709.1| DNA polymerase zeta catalytic subunit [Dictyostelium fasciculatum]
Length = 2115
Score = 395 bits (1014), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/521 (41%), Positives = 314/521 (60%), Gaps = 40/521 (7%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVAL------AFENDSDHAVEIYVLLYCKSESHQ 1010
LTLLS+E+ ++G L P+P D + +A A E D ++ LL + S+
Sbjct: 1236 LTLLSVEIHVNTKGTLNPNPETDPVLAIAYVIRDEGASEEQGDDYKDVTGLLVIAASSNT 1295
Query: 1011 RSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
S +G+ C + V E L F+ ++ SFD DIL+G+++Q S+G+L ERA +GI L
Sbjct: 1296 -STMGL-GCPIRVFQDERELLKAFVALVRSFDVDILVGFEVQYASIGYLIERARWIGISL 1353
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+++SR L S I +S ++N D +G H+SG+ +
Sbjct: 1354 CDEVSR--LISHIQGKES----LNKSNNFFVRE-------------RDRFGYDHSSGIQI 1394
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA------SGPGRA 1184
GRIVLN+WRL+R E+ L+ Y+ E V L ++ P +VLT W+ + P
Sbjct: 1395 VGRIVLNMWRLLRHEITLDNYSFENVCFYALHQRYPHYSHQVLTDWYGDPKSIETIPPPL 1454
Query: 1185 RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
R++ + + + RA +L+++ D+I R+SE ARV+GIDFFSVLSRGSQYRVESMLLRL
Sbjct: 1455 RWKTLRHTLDRAMGSLDLIQHFDIIGRSSEFARVYGIDFFSVLSRGSQYRVESMLLRLTK 1514
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
+NY+ SP Q +QP EC+PLVM+P + Y PV VLDFQSLYPS+MI +N C+ T
Sbjct: 1515 PENYILYSPSREQTTNQPMPECIPLVMDPATRLYDSPVAVLDFQSLYPSIMIGHNYCYST 1574
Query: 1305 CLGKILPSK--ENT--LGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRL 1358
CLGK+ P+ +NT LG S + ++ L + + + PNGVM+V R+G+ P+L
Sbjct: 1575 CLGKVQPTSDTDNTKRLGSGSIKIQNGLVEALHANNAINVSPNGVMFVKSDTRRGIFPKL 1634
Query: 1359 LEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAEL 1418
L E+L TRIMVK+A+KK +++I +++ ++RQL LKL+ANV YGYT+A +SGRM C EL
Sbjct: 1635 LSEVLDTRIMVKKAMKKHKDNKRI-YKMLDSRQLGLKLMANVAYGYTSATYSGRMSCIEL 1693
Query: 1419 ADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
DSIVQ R TLE AI +++ A V+YGDTD V +
Sbjct: 1694 GDSIVQTARETLESAIKITETGKEFNASVVYGDTDSLFVLM 1734
Score = 120 bits (300), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 34/195 (17%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
FSVRIV +D+Y+ P+ YD+ S L + +VP++RV+GSTPAGQK CLH+H PY
Sbjct: 25 FSVRIVDLDYYLYKPVEKYDVIKSPLDNSTIQQVPIVRVFGSTPAGQKCCLHLHNLFPYF 84
Query: 71 YVPCA-DIPVQLRQED---DGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAK---- 122
++ D+P+ Q + + +I++A+ K + + QH+ L + +
Sbjct: 85 FIQYNDDLPLDNEQINIFVRKLVASINIAMVTNQKQSNNNNNNVQHIFNIKLTKGRPFYG 144
Query: 123 --------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGH 156
+ G++ + + E+HIPFLLQ +DYNL GM
Sbjct: 145 YYPDNKIFIKIFLYNPDNLNKISNLLRSGSIMGRKFEVFEAHIPFLLQVFLDYNLAGMSF 204
Query: 157 LHLSKLKFRHPVPDA 171
+ +++ FRHP+P +
Sbjct: 205 IDFTRVHFRHPLPQS 219
>gi|88604880|gb|ABD46760.1| REV3 [Neurospora crassa]
Length = 1926
Score = 394 bits (1013), Expect = e-106, Method: Compositional matrix adjust.
Identities = 233/611 (38%), Positives = 337/611 (55%), Gaps = 72/611 (11%)
Query: 879 VLEEMHQEADEMISTE---PTPDLNGVTAIMHNEGHIAEPNACADCLQDI----SQISGP 931
V+ E QE M E P P V+ +E + P C I SQI+G
Sbjct: 844 VIYEAQQEECAMRGWEIADPPPSFKEVSNWWTDEQNDRNPKRCHSTPLRIKTYRSQIAGV 903
Query: 932 DGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRYDSINVVA 985
TP + GF+ P + + ++ +S+EV +RG L PDP D + V
Sbjct: 904 ------TPKIKHGFEHPEKTKSESKQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEVQCVF 957
Query: 986 LAFEND----------SDHAVEIYV-----LLYCKSESHQRSLVGIPDCKVFVCSKEIHL 1030
++ D A I V LL + H +P V + E+ +
Sbjct: 958 WYLRSEVNALRGTQTPDDTARGIIVFSEDSLLADRIRKH----TSVP---VVQETTELDM 1010
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSE 1089
++I+ + DPDI G+++ G S G+L ERA + L ++ SR +S G
Sbjct: 1011 MVRMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIG--- 1067
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
KDA D WG S + + GR ++N+WR MRGE+ L
Sbjct: 1068 ----------------------KDA---DRWGFNTTSSIRITGRHMINIWRAMRGELNLL 1102
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
YT+E V +L R+IP ++ L+ W+ S + + + Y + R +L++EI+ + ++I
Sbjct: 1103 QYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILEKNELI 1162
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L SP V +Q A+ECLPL
Sbjct: 1163 PRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSPSRKHVGAQNALECLPL 1222
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHV 1328
VMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++ +
Sbjct: 1223 VMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGRNKMGFMDYKRQEGL 1282
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L LKD + I PNG+MY P +RK +L ++ EIL TRIMVK +K+ + I ++ N
Sbjct: 1283 LSLLKDYINIAPNGMMYTKPHIRKSLLAKMSTEILETRIMVKSGMKQDKDDRAI-QQLLN 1341
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW A V+
Sbjct: 1342 NRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWDADVV 1401
Query: 1449 YGDTDRYTVCI 1459
YGDTD V +
Sbjct: 1402 YGDTDSLFVSL 1412
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FLRLRLNCIDHYQATPTRYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D + ++L K + G R +
Sbjct: 63 FPYLYVEYDGNLEPNKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQQGVIMSRIFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 VP 169
VP
Sbjct: 183 VP 184
>gi|346320496|gb|EGX90096.1| DNA polymerase zeta catalytic subunit, putative [Cordyceps militaris
CM01]
Length = 1666
Score = 394 bits (1013), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/546 (39%), Positives = 316/546 (57%), Gaps = 53/546 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGF---QDPASAGAGEQLTLLS---IEVQAESRGDLRPDPRY 978
+SQI GP TP ++ GF Q S ++ +S +EV +R L P+P
Sbjct: 784 LSQIDGP------TPKNKHGFKYTQQRKSTNVQHEVQYMSTMCLEVHVNTRAKLVPNPEE 837
Query: 979 DSINV---------VALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIH 1029
D + V A +ND D + ++L + +R L +V E++
Sbjct: 838 DEVQCIFWCCKGDEVTYASQNDGDGTISGLIVLGSGGDVARR-LRKTCKAEVIEEDSELN 896
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDS 1088
L ++ DPDIL G+++ GGS GFL ERA L N++SR +S G
Sbjct: 897 LLVRLGDVVKELDPDILTGYEVHGGSWGFLMERARLKYDYDLCNELSRVNAQSHGRFGKQ 956
Query: 1089 EISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKL 1148
D WG S + V GR ++N+WR MRGE+ L
Sbjct: 957 S----------------------------DRWGFNTTSTIRVTGRHMINIWRAMRGELNL 988
Query: 1149 NMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDM 1208
YT+E VA +L R++P ++ LT W+ SG + + Y R K++L+I+ ++
Sbjct: 989 LQYTLENVAWHLLHRRVPHYSYKTLTAWYKSGKPSDLSKLLRYFQSRTKIDLQILEANEL 1048
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
I RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L ISP QV Q A+ECLP
Sbjct: 1049 IPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLISPSKKQVGGQNALECLP 1108
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP-SKENTLGVSSFRPDLH 1327
LVMEP+S Y+ PV+VLDFQSLYPS+MIAYN C+ T LG+I+ + +G + ++
Sbjct: 1109 LVMEPQSALYSSPVLVLDFQSLYPSVMIAYNYCYSTFLGRIVNWCGTSKMGFTEYKRQAG 1168
Query: 1328 VLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIF 1387
++ LKD + I PNG+M+V ++RK +L ++L EIL R+MVK +K+ ++L ++
Sbjct: 1169 LMALLKDYINIAPNGMMFVKAEIRKSLLAKMLTEILEARVMVKSGMKE-DKDDKMLQQLL 1227
Query: 1388 NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKV 1447
N RQLALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ R TLE++I++++ EKW A+V
Sbjct: 1228 NNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTARETLERSIAYIHSVEKWGAEV 1287
Query: 1448 IYGDTD 1453
+YGDTD
Sbjct: 1288 VYGDTD 1293
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 42/199 (21%)
Query: 9 NIFSVRIVSIDHYMAPPIPGYDICYSS----LQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
++F VR+ ID Y A P YD + Q + +VPVIR++GST GQK C+H+H
Sbjct: 2 DLFRVRLNCIDSYQATPT-SYDPQLRNDIRPSQAARGPKVPVIRIFGSTETGQKVCVHVH 60
Query: 65 RALPYLYVPCADIPVQLRQEDDG-YMHAISLALEKALKV---KGSAGSKRQHVHECSLVR 120
A PYL++ + L Q++ G ++ + L+++ AL V + G + V +LV+
Sbjct: 61 GAFPYLFI---EYEGGLSQDEVGSFIFKLHLSIDHALSVSFRRDEQGLNSRFVARITLVK 117
Query: 121 AK------------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYN 150
+ GA+ + QP+E+H+ +L QF++DYN
Sbjct: 118 GVPFYGYHVGYRFFLKIYMYNPMVMTRLTDLLQQGAILKQKFQPYEAHLQYLSQFMIDYN 177
Query: 151 LYGMGHLHLSKLKFRHPVP 169
L+G +L S+ FR PVP
Sbjct: 178 LFGCDYLDASQTAFRAPVP 196
>gi|328718109|ref|XP_001949189.2| PREDICTED: DNA polymerase zeta catalytic subunit-like [Acyrthosiphon
pisum]
Length = 1485
Score = 394 bits (1013), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/509 (40%), Positives = 311/509 (61%), Gaps = 37/509 (7%)
Query: 954 GEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSL 1013
+ LT++++E+ ++R ++ PDP YD I + N S+++ +L + ++
Sbjct: 669 SDNLTIITMELHTQTRINMNPDPEYDCIQGIFYTIFNMSENSSRTGSILVNQINNNFNGF 728
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
++ VC+ EI L + F +++ ++DP+++ G++++ S G+L +R HLG + +
Sbjct: 729 SNFKP-EIIVCNDEIELVNTFFQLVNNWDPEVICGYEMEMHSWGYLKDRCRHLGRNMNKE 787
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+SR +E++ SE +E IT+ S L + GR
Sbjct: 788 LSRLTIENE---QSSEYNEE-ITN----------------------------SELKIKGR 815
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
IVL+VWRL+R E+ + YT E + +L +++P+ ++ L+ W+ R+ ++Y +
Sbjct: 816 IVLDVWRLLRHELAVQSYTFENMVYLILHQRVPNYSYQTLSFWWDHNTLLYRWLTMDYYL 875
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
+ + + I+ QLD+I RTSELA++FGI F+ VLSRGSQ+RVESM+LRLA +NY+A+SP
Sbjct: 876 FKVESTINILQQLDIIGRTSELAKLFGIQFYEVLSRGSQFRVESMMLRLAKNKNYVAVSP 935
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-LPS 1312
Q A A + +PL+MEPES FY DPV+VLDFQSLYPS++IAYN CF TCLG I L
Sbjct: 936 SIKQRAEMNAAQSVPLIMEPESKFYTDPVIVLDFQSLYPSIIIAYNYCFSTCLGNIDLLG 995
Query: 1313 KENT--LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
K G + L L D++ I P+GV +V + KG+LP +L+EIL TRIMVK
Sbjct: 996 KTEVFKFGCTKLNVPFQTLLKLTDDMTISPSGVAFVKKNICKGILPSMLQEILDTRIMVK 1055
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+K+ ++ L +I NA+QL LKLIANVTYGYT+A FSGRMPC E+ DS+V GR TL
Sbjct: 1056 NLMKEQKNNKH-LCKILNAQQLGLKLIANVTYGYTSANFSGRMPCIEVGDSVVSKGRETL 1114
Query: 1431 EKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
E+AI+ + +KW AKVIYGDTD V +
Sbjct: 1115 ERAITLIQSTKKWNAKVIYGDTDSIFVLL 1143
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 34/188 (18%)
Query: 12 SVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLY 71
+V +V+IDHYM+ P G+D YS G ++ +VPV+RV+G TP G+K CLH+H PY++
Sbjct: 9 NVSLVTIDHYMSNPADGFDSLYSEFWGTQILKVPVLRVFGCTPNGEKCCLHVHGVFPYIF 68
Query: 72 VPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK-------- 122
+P + QE ++ +L+KAL + GS SK +H+H V K
Sbjct: 69 IPLEESYETKNQE---ILYNFGNSLDKALSLAIGSTNSKSKHIHNIITVCGKSFYGYHTE 125
Query: 123 ----------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLS 160
+ GAV + QPHE+HIP+ LQF++DYNL+GM ++ LS
Sbjct: 126 NTKFLKILFYNPYSAKIAVDLLQNGAVCNTIFQPHEAHIPYHLQFMIDYNLHGMNYIKLS 185
Query: 161 KLKFRHPV 168
+K+R+ V
Sbjct: 186 AVKYRNSV 193
>gi|449551085|gb|EMD42049.1| hypothetical protein CERSUDRAFT_90650 [Ceriporiopsis subvermispora B]
Length = 1717
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/539 (41%), Positives = 304/539 (56%), Gaps = 49/539 (9%)
Query: 926 SQISGPD-----GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDS 980
SQI GP G TP ++ P +A ++LLS+EV A SR P+ D
Sbjct: 809 SQIEGPTQANPYGLRNATPAAK-----PKTARERRNMSLLSLEVFAPSRDGRLPNFEEDE 863
Query: 981 INVVALAFENDSDHAVEIYVLLYCKS-----ESHQRSLVGIPDCKVFVCSKEIHLFSHFI 1035
I V +++ DS EI C+S SHQ + + + V S E+ L + I
Sbjct: 864 IAAVFWSYQ-DSGFDSEIDGRFLCESGIIVVTSHQLDPKRLRNLSLDVVSSELDLLNTTI 922
Query: 1036 KILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGI 1095
I+ + DPDI+ GW IQ S G+L RA G + ISR P + A G +
Sbjct: 923 DIVRALDPDIVTGWQIQTASWGYLNARAQTYGYEIGEQISRAP--GRPAGGGT------- 973
Query: 1096 TDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEA 1155
D+WG S V GR VLN WR++R E YT E
Sbjct: 974 ----------------------DQWGARTTSTFKVTGRHVLNTWRIVRSENSFTSYTFEN 1011
Query: 1156 VAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSEL 1215
+L ++ P + LT W+ S + + Y R LE+++ +++ + +E
Sbjct: 1012 AVFQILHKRTPYYTLQTLTDWYNSPVPARTIQLLRYFSHRTASVLEVLHAAEVVTKNAEF 1071
Query: 1216 ARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPES 1275
AR+FG+DFFSVLSRGSQ++VES + R+A ++++ +SP V Q A EC+PL+MEP S
Sbjct: 1072 ARIFGVDFFSVLSRGSQFKVESFMFRIAKPESFVLLSPSKQDVGKQNAAECMPLIMEPLS 1131
Query: 1276 GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKD 1334
FY+ P+VVLDFQSLYPS+MIAYN C+ TCLG++ K + GV+ R +L LKD
Sbjct: 1132 AFYSSPLVVLDFQSLYPSIMIAYNYCYSTCLGRVTDFKGQYKFGVTDLRLPPGLLDTLKD 1191
Query: 1335 ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLAL 1394
+ + NG+MYV P+VRKG+L R+L E+L TR+MVKQA+K + + L R+ ARQLAL
Sbjct: 1192 HINVAANGIMYVKPEVRKGLLGRMLTELLDTRVMVKQAMKGVK-EDKGLKRVLEARQLAL 1250
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
K IANVTYGYT+A +SGRMP E+ADSIVQ GR TLEKA+ ++ +KW AKV+YGDTD
Sbjct: 1251 KFIANVTYGYTSATYSGRMPAVEIADSIVQSGRETLEKAVRVIDSTKKWGAKVVYGDTD 1309
>gi|390604346|gb|EIN13737.1| hypothetical protein PUNSTDRAFT_117429 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1767
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/513 (41%), Positives = 303/513 (59%), Gaps = 42/513 (8%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN------DSDHAVEIYVLLYCKSES 1008
+ LT+LS+EV A SRGDL P+P D I VA AF++ D + +++
Sbjct: 921 DALTVLSLEVFAPSRGDLLPEPETDGIAAVAWAFQDTINAQPDEGFSCRRGLIVLASDPI 980
Query: 1009 HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLG 1067
Q L D V V E+ L + I ++ DPDI+ G+++Q S G+L+ RA + G
Sbjct: 981 QQDRLR---DHPVEVAQDELDLINRTIDLVLGMDPDIVAGYEVQSSSWGYLSCRADSAFG 1037
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
+ + ISR P ++ G+ + W +
Sbjct: 1038 LDIGEQISRAPPGTRNPGGNLQ------------------------------WSIRTTAS 1067
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
V GR V N+WRLMR E L Y+ E + TVL ++ P LT+W+ S R
Sbjct: 1068 FEVVGRHVFNIWRLMRSEQTLLNYSFENLVFTVLHKRTPKYRNSTLTEWYRSAVPGHNSR 1127
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
+ Y+ RA LNL++++ +++ +T+E ARV G++F+SV+SRGSQY+VES + R+A ++
Sbjct: 1128 LLRYLSDRAALNLQLLDATEVVTKTAEFARVHGVEFYSVISRGSQYKVESFVSRIAKPES 1187
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
Y+ +SP V Q A E +PLVMEP S FY PV+VLDFQSLYPS+MIAYN + TCLG
Sbjct: 1188 YVMLSPSKEDVGRQNAAEAMPLVMEPLSSFYTSPVLVLDFQSLYPSVMIAYNFSYDTCLG 1247
Query: 1308 KILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTR 1366
+ +P K +N GV+ + +L LKD++ + PNG++YV VRKG+L R+L E+L+TR
Sbjct: 1248 RSVPFKGQNKFGVTDLQLPPGLLERLKDDVNVAPNGMIYVKQHVRKGLLGRMLAELLNTR 1307
Query: 1367 IMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
+MVKQA+K + S + L RI NARQL LK IANVTYGYT+A +SGRMP E+ADSIVQ G
Sbjct: 1308 VMVKQAMKGVK-SDKALTRILNARQLGLKFIANVTYGYTSATYSGRMPAVEIADSIVQSG 1366
Query: 1427 RSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
R TLEKAI ++ KW AKV+YGDTD + +
Sbjct: 1367 RETLEKAIHLIDSEPKWGAKVVYGDTDSLFILL 1399
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 48/199 (24%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M +QP SVR+ +ID+Y+APP P L + VPVIRV+G+ GQKTC
Sbjct: 1 MESTQP---ALSVRLNNIDYYLAPPGP--------LDNSTLPRVPVIRVFGNGNVGQKTC 49
Query: 61 LHIHRALPYLYVPCADIPVQLRQED-DGYMHAISLALEKALKV---KGSAGSKRQHVHEC 116
+HIH+ PY +V ++ E + Y+ +S +L A+ V + K Q V
Sbjct: 50 VHIHQVYPYFFVEYLG---RMEPEHVNRYIARLSRSLNHAIAVSMKRNPQSQKSQFVRAV 106
Query: 117 SLVRAK------------------------------KGGAVFDKSLQPHESHIPFLLQFL 146
++V+ + G V S + ESH+ ++LQF+
Sbjct: 107 TIVKGVHFYGFHSSYSPFLKVHIADPAVVNRATTILRSGTVMRTSFRIFESHLNYVLQFM 166
Query: 147 VDYNLYGMGHLHLSKLKFR 165
D+ LYG G L L ++ R
Sbjct: 167 SDFGLYGCGVLDLGEVWQR 185
>gi|88604876|gb|ABD46758.1| REV3 [Neurospora crassa]
Length = 1926
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/611 (37%), Positives = 338/611 (55%), Gaps = 67/611 (10%)
Query: 878 PVLEEMHQEADEMIS------TEPTPDLNGVTAIMHNEGHIAEPNACADCLQDI----SQ 927
P+LE +++ E + +P P V+ ++ P C + SQ
Sbjct: 840 PMLEAIYEAQQEECAMRGWEIADPPPSFKEVSDWWTDKQKDRNPKRCHFTPLKVQTYRSQ 899
Query: 928 ISGPDGRSKPTPLSQIGFQDP------ASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++G TP + GF+ P ++ + ++ +S+EV +RG L PDP D +
Sbjct: 900 VAGV------TPKKKHGFEHPEKTKPESAQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEV 953
Query: 982 NVV---------ALAFENDSDHAVEIYVLLYCKS--ESHQRSLVGIPDCKVFVCSKEIHL 1030
V AL D V V+ R +P V + E+ +
Sbjct: 954 QCVFWYMRSEVNALRGTQAPDDTVRGIVVFSEDGLLADRIRKHTSVP---VVQETTELDM 1010
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSE 1089
++I+ + DPDI G+++ G S G+L ERA + L ++ SR +S
Sbjct: 1011 MVRMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSN------- 1063
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
+ KDA D WG S + + GR ++N+WR MRGE+ L
Sbjct: 1064 ------------------GRIGKDA---DRWGFNTTSSIRITGRHMINIWRAMRGELNLL 1102
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
YT+E V +L R+IP ++ L+ W+ S + + + Y + R +L++EI+++ ++I
Sbjct: 1103 QYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKVLRYYLTRTRLDIEILDKNELI 1162
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
RTSE AR+ G+DFFSV SRGSQ++VES++ R+A +N+L SP QV +Q A+ECLPL
Sbjct: 1163 PRTSEHARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPL 1222
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHV 1328
VMEP+S FY+ P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G ++ +
Sbjct: 1223 VMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGRNKMGFMDYKRQEGL 1282
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
L LKD + I PNG+MY P +RK +L ++L EIL TRIMVK +K+ + I + N
Sbjct: 1283 LSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDKDDRAI-QPLLN 1341
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
R LALKL+ANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+F++ +KW A V+
Sbjct: 1342 NRPLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKWDADVV 1401
Query: 1449 YGDTDRYTVCI 1459
YGDTD V +
Sbjct: 1402 YGDTDSLFVSL 1412
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 87/181 (48%), Gaps = 22/181 (12%)
Query: 10 IFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
+R+ IDHY A P P +D + K +VPVIRV+GST GQK C HIH A
Sbjct: 3 FIRLRLNCIDHYQATPTRYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGA 62
Query: 67 LPYLYV-------PCAD--IPVQLRQE--DDGYMHAISLALEKALKVKGSAGSKRQH--- 112
PYLYV P D + + R++ D + ++L K G R +
Sbjct: 63 FPYLYVEYDGDLEPNKDHALAISYRKDPIRDRPKYVARISLTKGTPFYGFYVGYRFYLKI 122
Query: 113 -----VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
V LV + G + + QP+E+H+ +LLQF+ DYNLYG +L + FR P
Sbjct: 123 YLFNPVVMSRLVDLLQHGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAP 182
Query: 168 V 168
V
Sbjct: 183 V 183
>gi|366991433|ref|XP_003675482.1| hypothetical protein NCAS_0C01250 [Naumovozyma castellii CBS 4309]
gi|342301347|emb|CCC69115.1| hypothetical protein NCAS_0C01250 [Naumovozyma castellii CBS 4309]
Length = 1473
Score = 391 bits (1005), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 300/515 (58%), Gaps = 40/515 (7%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS---DHAVEIYVLLYCKSES--- 1008
+ LT ++E+ R RPDP+ D +N++ E ++ D ++ ++ E
Sbjct: 636 DTLTHFTLEIHVNCRNGKRPDPKEDEVNMIVWCIEEETFPFDLSIAKEGIMALNKEGSSP 695
Query: 1009 -HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLG 1067
++ V E +F ++ FDPDIL G+++ S G++ ER
Sbjct: 696 YEEKFERAASPVSVAFFETEFDMFDALTDLILLFDPDILSGFEVHMSSWGYIIERC---- 751
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
R + IA + ++ER + +D WG TH+SG
Sbjct: 752 --------RIIHKFDIAVEIARVNERWKNKS------------------KDVWGYTHSSG 785
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTK-WFASGPGRARY 1186
+ GR V+N+WR++R E+ L YT+E + VL ++P F LTK W +G
Sbjct: 786 TQITGRHVINIWRVLRSELNLTQYTIENIVYNVLHERLPHFSFDTLTKLWTDTGNLCGLK 845
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
+ Y + RA++N+ ++ + + I +T E AR+ GIDF SV RGSQ++VES L+R+ ++
Sbjct: 846 TVIFYWLTRARMNVRLLQKQEFIGKTMEQARLIGIDFHSVFYRGSQFKVESFLIRICKSE 905
Query: 1247 NYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
+Y+ IS QV Q A+EC+PLVMEPES FY P++VLDFQSLYPS+MIAYN C+ T +
Sbjct: 906 SYVLISASKKQVRRQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIAYNYCYSTMI 965
Query: 1307 GKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILS 1364
G++ L + N LGV++F + ++LR L++++ I PNGV+Y VRK L ++L EIL
Sbjct: 966 GRVRNLTTHGNELGVATFSLEKNLLRLLENDVTIAPNGVVYAKSTVRKSTLAKMLTEILD 1025
Query: 1365 TRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
R+MVK+ I +L + L R+ N +QLALKL+ANVTYGYT+A FSGRMPC++LADS+VQ
Sbjct: 1026 IRVMVKKTISELGKGNERLRRVLNNKQLALKLLANVTYGYTSASFSGRMPCSDLADSVVQ 1085
Query: 1425 CGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
GR TLEKAIS + NE W AKV+YGDTD V +
Sbjct: 1086 TGRETLEKAISIIESNEDWGAKVVYGDTDSLFVYL 1120
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 50/203 (24%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
++++ + D YM+ P P SL + VPVIR+YGS P+G + HIH LPY+
Sbjct: 17 LNIQLNNYDFYMSKPTPLDRAHGISLPMNQYIRVPVIRIYGSLPSGHQVLCHIHGVLPYI 76
Query: 71 YV---------------PCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHE 115
+V CA + L ++ S+ K + S S +++
Sbjct: 77 FVQYNGEVSDSNAIMNQKCAQLQELLEKQISA-----SMKNRKNNQQSASNASSLEYIAN 131
Query: 116 CSLVRA------KKGGAVFDK--SLQP----------------------HESHIPFLLQF 145
S+ +A G +F K L P +E+HIP+LLQF
Sbjct: 132 VSVTKAVPFYAFHVGWTLFYKISILNPSFVNRIADLLRDGNLNLAHNEVYEAHIPYLLQF 191
Query: 146 LVDYNLYGMGHLHLSKLKFRHPV 168
D+NL+G + L K FR PV
Sbjct: 192 SADFNLFGCDWIKLEKCYFRKPV 214
>gi|322709541|gb|EFZ01117.1| hypothetical protein MAA_03713 [Metarhizium anisopliae ARSEF 23]
Length = 1698
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/540 (37%), Positives = 315/540 (58%), Gaps = 41/540 (7%)
Query: 925 ISQISGPDGRSKPT-PLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINV 983
+SQI GP ++K +Q G + + + ++ +S+E+ +RG P+P D +
Sbjct: 826 LSQIDGPTQKNKHGFKYTQKG-KSTSVEHEVQYMSTMSLEIHVNTRGKYVPNPEEDEVQC 884
Query: 984 V--------ALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFI 1035
+ + +S A+ +++ + +++ + S E+ L +
Sbjct: 885 IFWVCKSDEVVGISQNSPGAIHTGIVVLSQDGKESQAMRKSTGSDIIEESSELDLIVRMV 944
Query: 1036 KILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEISERG 1094
+I+ ++DPDIL G+++ S G+L ERA L ++ SR +S G
Sbjct: 945 EIVRTYDPDILTGYEVHSSSWGYLIERARCKYDYNLCDEFSRMKSDSHGRFGKQS----- 999
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
D WG S + V GR ++N+WR MRGE+ L Y++E
Sbjct: 1000 -----------------------DRWGFNTTSTIRVTGRHMINIWRAMRGELNLLQYSLE 1036
Query: 1155 AVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSE 1214
VA +L R++P +R LT W+ SG R + Y R ++++I+ ++I RTSE
Sbjct: 1037 NVAWHLLHRRVPHYSWRTLTSWYKSGKSSDLGRVIRYYQTRTLMDIQILETNELIPRTSE 1096
Query: 1215 LARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPE 1274
AR+ G+DFFSV SRGSQ++VES++ R+A +N++ +SP QV SQ A+ECLPLVMEP+
Sbjct: 1097 QARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFILVSPSRKQVGSQNALECLPLVMEPQ 1156
Query: 1275 SGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE-NTLGVSSFRPDLHVLRDLK 1333
S FY P++VLDFQSLYPS+MIAYN C+ T LG+I + N +G + ++ +L LK
Sbjct: 1157 SAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRITNWRGVNKMGFTEYKRQEGLLALLK 1216
Query: 1334 DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLA 1393
D + I PNG+MYV ++RK +L ++L EIL TR+MVK +K ++L ++ N RQLA
Sbjct: 1217 DYINIAPNGMMYVKSEIRKSLLAKMLTEILETRVMVKSGMKS-DKDDKVLQQLLNNRQLA 1275
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
LKL+ANVTYGY +A FSGRMPC+E+ADSIVQ GR TLE+A ++++ ++W A+V+YGDTD
Sbjct: 1276 LKLLANVTYGYASASFSGRMPCSEIADSIVQTGRETLERATAYIHSVDRWGAEVVYGDTD 1335
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 96/198 (48%), Gaps = 40/198 (20%)
Query: 9 NIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
N+F VR+ IDHY A P P + Q K +VPV+R++GST GQK C H+H
Sbjct: 2 NLFRVRLNCIDHYQAIPTRYDPQLRNDVRASQVAKGPKVPVVRIFGSTETGQKVCAHVHG 61
Query: 66 ALPYLYVPC-ADIPVQLRQEDDGYMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA 121
A PYLYV D+ E Y++ + L+++ AL V + G + V +LV+
Sbjct: 62 AFPYLYVEYDGDLAP---DEVGAYIYRLHLSIDHALAVSYRRDQYGEDAKFVARITLVKG 118
Query: 122 ------------------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
+ G + + QP+E+H+ +LLQF+VDYNL
Sbjct: 119 IPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVIMKRKFQPYEAHLQYLLQFMVDYNL 178
Query: 152 YGMGHLHLSKLKFRHPVP 169
YG G+L SK FR P+P
Sbjct: 179 YGCGYLESSKTAFRSPIP 196
>gi|312378973|gb|EFR25393.1| hypothetical protein AND_09281 [Anopheles darlingi]
Length = 878
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/527 (42%), Positives = 309/527 (58%), Gaps = 53/527 (10%)
Query: 952 GAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND--SDHAVEIYVLLYCKSESH 1009
A LT+LS+E+ ++RGDLRP+P D I + ND DH V ++
Sbjct: 12 AAYNYLTILSLEIHVQTRGDLRPNPNTDPIAAIFYRIHNDVPPDHPRASSVCGIILNQEQ 71
Query: 1010 QRSLVG-----IPDCK---------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGS 1055
+ G P K V V E L+ F+ ++ +DPDI G++I+ S
Sbjct: 72 TTTGEGGDGNTAPGYKYNQCPYVADVVVVQGERELYEKFLLLIAFWDPDIFTGYEIESVS 131
Query: 1056 LGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAI 1115
G++ ER L + L+ +SR P K+ + E E
Sbjct: 132 WGYVIERGYVLEMNLMKMLSRVPTLEKVHVSEEEQQELLEMHE----------------- 174
Query: 1116 IEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTK 1175
+++GL + GRI+L++WRLMR E+ L YT E V +L R++P FR LT+
Sbjct: 175 --------YSAGLKIPGRILLDIWRLMRHEIALTSYTFENVVYHILHRRVPCHSFRQLTR 226
Query: 1176 WFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRV 1235
+ S P R+ ++Y + R N I++QLD+I RT+ELA++FGI F+ VLSRGSQ+RV
Sbjct: 227 VW-SKPC-TRWIVLDYYLERVNGNFAILHQLDLIGRTAELAKLFGIQFYEVLSRGSQFRV 284
Query: 1236 ESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMM 1295
ESM+LR+A N++++SP Q A A E LPL+MEP S FYADP++VLDFQSLYPS++
Sbjct: 285 ESMMLRIAKPGNFVSVSPSIQQRAHMRAPEYLPLIMEPNSRFYADPIIVLDFQSLYPSVI 344
Query: 1296 IAYNLCFCTCLGKI-------LPSKENTLGVSSFRPDLHVLRDLKDELLIP--PNGVMYV 1346
IAYN CF TCLG+I +E G S R +L+ L D+ LI P G+ +V
Sbjct: 345 IAYNYCFSTCLGRIEHLGVGEESVREFEFGASHLRVPRKMLQVLLDKNLITCSPCGIAFV 404
Query: 1347 PPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTA 1406
+VR+GVLPR+L EIL+TR+MVK+++ KL IL R+ ++RQL LKLIANVTYGYTA
Sbjct: 405 KKRVREGVLPRMLSEILNTRLMVKKSM-KLHKDNTILQRVLHSRQLGLKLIANVTYGYTA 463
Query: 1407 AGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
A FSGRMPC E+ DS+V GR TLE+AI V E E+W AKV+YGDTD
Sbjct: 464 ANFSGRMPCVEIGDSVVAKGRETLERAIKLVEETERWGAKVVYGDTD 510
>gi|409051564|gb|EKM61040.1| hypothetical protein PHACADRAFT_204189 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1614
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 232/591 (39%), Positives = 328/591 (55%), Gaps = 74/591 (12%)
Query: 900 NGVTAIMHNEGHIAEPNACADCLQDIS-----QISGPDGRSKPTPLSQIGFQ-----DPA 949
G++A+ GH EP++ L + S P PT +++ G + P
Sbjct: 660 TGISALEEWAGH--EPSSGLRKLDNTGVYGWEYASVPPSIVGPTQVNRYGMKASPPTRPV 717
Query: 950 SAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS----DHAV----EIYVL 1001
+ G +T LSIEV A SR D PDP D + A + + DH E VL
Sbjct: 718 ARDKG-GMTALSIEVFAPSREDKLPDPGLDEAVAIFYALYDSNCPRVDHGTPFECETGVL 776
Query: 1002 LYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAE 1061
L E+ Q + + D + E+ L +H + ++ DPDIL+GWD+Q GS +L+
Sbjct: 777 LL---ENPQFDPLRLRDWRFESVESELDLINHVVDVVQDLDPDILVGWDVQAGSWSYLSA 833
Query: 1062 RAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWG 1121
RA G+ ISR P + A+ D+WG
Sbjct: 834 RAGTYGLDFGEQISRAPGRAH-------------------------------AVQSDQWG 862
Query: 1122 RTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
S V GR VLN+WR+MR E+ L+ Y++E VLRR+ P LT+W+ S
Sbjct: 863 LRTTSTFRVIGRHVLNLWRIMRSELSLSSYSLENAVFHVLRRRTPRHSPGTLTEWYHSKI 922
Query: 1182 GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLR 1241
R + Y + RA + +E++ ++I + SE ARVFG+DFFSVLSRGSQ++VES + R
Sbjct: 923 PEHTSRLIRYCLARATIVVEMLEVAEVITKNSEFARVFGVDFFSVLSRGSQFKVESFMFR 982
Query: 1242 LAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLC 1301
+A ++++ +SP V Q A EC+PL+MEP S FY+ P+VVLDFQSLYPS+MIAYN C
Sbjct: 983 IAKPESFVLLSPSKQDVGKQNAAECMPLIMEPLSAFYSSPLVVLDFQSLYPSVMIAYNYC 1042
Query: 1302 FCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLE 1360
+ TCLG+++ K +N GVS +L+ L+D + I PNG+++V P VRKG+L R+L
Sbjct: 1043 YSTCLGRVVDFKGQNKFGVSELHQPPELLKTLEDYINISPNGMVFVKPAVRKGLLGRMLT 1102
Query: 1361 EILSTRIMVKQAIKKLAPSQ------------------QILHRIFNARQLALKLIANVTY 1402
E+L TR+MVKQA+K++ ++ Q L R+ ARQL+LK IANVTY
Sbjct: 1103 ELLDTRVMVKQAMKRVKDNKAYLTLSKYYAYTHLGYRYQALSRVLEARQLSLKFIANVTY 1162
Query: 1403 GYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
GYT+A +SGRMP E+AD+IVQ GR TLEKAI ++ KW A+V+YGDTD
Sbjct: 1163 GYTSATYSGRMPAVEIADAIVQTGRETLEKAIRLIDSTPKWGARVVYGDTD 1213
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M D +P+ +R+ ID+ + P P L G + VP+IR+YG + G+K C
Sbjct: 1 MDDQEPN---LRIRVNQIDYIVEPAGP--------LDNGALPRVPIIRIYGESSVGKKAC 49
Query: 61 LHIHRALPYLYVPC------ADIPVQLRQEDDGYMHAISLALE----------------- 97
LH+H+ PY +V ++ + + HAISL+L+
Sbjct: 50 LHVHQVYPYFFVEYDGQVKPGNVNNYIAKLSHSLNHAISLSLKRNPNSHNSQVVRAIVLV 109
Query: 98 KALKVKGSAGSK----RQHVHECSL----VRAKKGGAVFDKSLQPHESHIPFLLQFLVDY 149
K + G S + H+ + +L V + G V + +ESH+ F LQF+ D+
Sbjct: 110 KGVHFYGFHASYSPFLKVHIADPALMNRAVTLMRSGTVMKTHFRIYESHLSFPLQFMCDF 169
Query: 150 NLYGMGHLHLSKLKFR 165
LYG G + L+++ R
Sbjct: 170 GLYGCGWIDLAEVWVR 185
>gi|403420400|emb|CCM07100.1| predicted protein [Fibroporia radiculosa]
Length = 1164
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/504 (41%), Positives = 290/504 (57%), Gaps = 38/504 (7%)
Query: 956 QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKS-----ESHQ 1010
+++LS+E+ A SR L P+P D I V ++++ + C+ ES
Sbjct: 314 HMSVLSLEIFAPSREKLLPNPDEDEIMAVFYSYQDSAGPQSAQDGTFSCERGIVAVESDC 373
Query: 1011 RSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
+ I D K+ E+ L + I ++ DPDI++GW+IQ S G+L RA G+ L
Sbjct: 374 MNARRIRDHKIEFVPSELDLLNRVIDLVIEIDPDIVVGWEIQASSWGYLNARAESYGLDL 433
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ ISR + +G D+WG S V
Sbjct: 434 GDQISRA-FGRRTGSG------------------------------SDQWGMRTTSTFKV 462
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR VLNVWR++R E + E V +LRR+ P LTKW+ S +
Sbjct: 463 IGRHVLNVWRIIRAEHNFTSHAFEHVVFQLLRRRTPWYSCETLTKWYRSTSPYHTSDLLR 522
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y R + LE+++ +++ + +E ARVFG+DFFSVLSRGSQ++VES + R+A ++++
Sbjct: 523 YFSNRVVMVLEVLDVAEVVTKNAEFARVFGVDFFSVLSRGSQFKVESFMFRIAKPESFVL 582
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
+SP V Q A EC+PL+MEP S FY P+VVLDFQSLYPS+MIAYN C+ TCLG++
Sbjct: 583 LSPSKQDVGKQNAAECMPLIMEPLSAFYNSPLVVLDFQSLYPSVMIAYNYCYSTCLGRVT 642
Query: 1311 PSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K +N GV+ +L L++ + + PNG++YV VRKG+L R+L E+L TR+MV
Sbjct: 643 DFKGQNKFGVTDLHQPAGLLETLQEHMHVAPNGMVYVNQDVRKGLLGRMLTELLDTRVMV 702
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
KQA+K A + L RI +ARQL LK IANVTYGYT+A FSGRMP E+ADSIVQ GR T
Sbjct: 703 KQAMKG-AKDDKALRRILDARQLGLKFIANVTYGYTSATFSGRMPAVEIADSIVQSGRET 761
Query: 1430 LEKAISFVNENEKWKAKVIYGDTD 1453
LEKAI +N +KW AKV+YGDTD
Sbjct: 762 LEKAIRVINSTKKWGAKVVYGDTD 785
>gi|322795808|gb|EFZ18487.1| hypothetical protein SINV_12915 [Solenopsis invicta]
Length = 1861
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/531 (40%), Positives = 300/531 (56%), Gaps = 40/531 (7%)
Query: 940 LSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIY 999
+S Q + + LTLLS+EV A +R +L PDP+YDS+ + A ND+ E
Sbjct: 1023 VSNENLQKARAITVHQYLTLLSLEVHAVTREELLPDPQYDSVAALFYAIYNDAPKDTEQQ 1082
Query: 1000 V---LLYCKSESHQRSLVGIPD----CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQ 1052
+ + S S L I C + + E F + IK++ +PD+L+GW+++
Sbjct: 1083 IEHGAIIVNSNSVSARLNKIHSASAMCPILYVATEQDAFDNLIKLIEQHNPDVLLGWEVE 1142
Query: 1053 GGSLGFLAERAAHLGIGLLN-DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLA 1111
S G++ +RA +L + IS+ P + D E+
Sbjct: 1143 TLSWGYIFQRALYLRLNNFPVRISKVPHIQIFSKSDVYAFEKD----------------- 1185
Query: 1112 KDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR 1171
A+ + V GR +L+VWR+MR E L YT E V VL +IP F+
Sbjct: 1186 ------------DANEIKVLGRNILDVWRIMRHEAALLTYTFENVMYHVLHERIPCPSFK 1233
Query: 1172 VLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGS 1231
L+ W+ + R + + V R ++++N LD+I RT E AR+FGI F+ V SRGS
Sbjct: 1234 ALSTWWKQESMILKSRVIRHYVIRVVGTIKLLNHLDIIGRTCEHARLFGIQFYEVFSRGS 1293
Query: 1232 QYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLY 1291
Q+RVESM+LRLA NY+ ISP HQ A A ECLPL+MEPES FY DP+VVLDFQSLY
Sbjct: 1294 QFRVESMMLRLAKPMNYIPISPSMHQRAKMRAPECLPLIMEPESKFYTDPLVVLDFQSLY 1353
Query: 1292 PSMMIAYNLCFCTCLGKILPSKEN---TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPP 1348
PSM+IAYN CF TCLG+I + G ++ R + L+ ++ P GV +V
Sbjct: 1354 PSMIIAYNYCFSTCLGRIEHIGQYGPFDFGAATLRIRKNTALKLQGKINFSPCGVAFVKK 1413
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAG 1408
+VR+G+LPR+L EIL+TR+MVK+++K + L R+ +++QL LKLIANVTYGYT+A
Sbjct: 1414 EVRQGILPRMLTEILNTRLMVKESMKLHPAKNRTLQRVLHSQQLGLKLIANVTYGYTSAN 1473
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
FSGRMPC E+ DS+V GR TLE+AI V KW +V+YGDTD V +
Sbjct: 1474 FSGRMPCIEIGDSVVSKGRETLERAIKLVETTPKWGGRVVYGDTDSLFVLL 1524
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 36/142 (25%)
Query: 56 GQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVH 114
G+KTCLHIH PY+YVPC +++ D + + ++ A++ AL GSA S QHV+
Sbjct: 1 GKKTCLHIHGVFPYMYVPCT-----VQENTDSHAYQLAAAIDSALNTSFGSALSTNQHVY 55
Query: 115 ECSLVRA------------------------------KKGGAVFDKSLQPHESHIPFLLQ 144
+ V + G + +++LQP+E+HIP+++Q
Sbjct: 56 KIQRVSGIPFYGYHEKEHLFFKIYFYNPAIIKRTADLLQNGVILNQTLQPYEAHIPYIMQ 115
Query: 145 FLVDYNLYGMGHLHLSKLKFRH 166
F++DYNLYGM ++L+ +K+R
Sbjct: 116 FMIDYNLYGMNLINLNSVKYRQ 137
>gi|365762744|gb|EHN04277.1| Rev3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1504
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/525 (38%), Positives = 300/525 (57%), Gaps = 49/525 (9%)
Query: 944 GFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN-----DSDHAVEI 998
G Q + LT L++E+ A +R D PDP D ++++ E D D A E
Sbjct: 654 GKQKEKKVSVHDSLTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEG 713
Query: 999 YVLLYCKSESH------QRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQ 1052
++++ SE Q + IP V E +F ++ DPDIL G++I
Sbjct: 714 IMIVHKASEDSTFPTKIQHCINEIP---VMFYESEFEMFEALTDLVLLLDPDILSGFEIH 770
Query: 1053 GGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLA 1111
S G++ ER + ++ +++R + K D+
Sbjct: 771 NFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDT----------------------- 807
Query: 1112 KDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR 1171
WG H+SG+ + GR ++N+WR +R +V L YT+E+ A +L +++P F
Sbjct: 808 --------WGYAHSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFE 859
Query: 1172 VLTK-WFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRG 1230
LT W A + Y + RA++N++++ + D I R E AR+ GIDF SV RG
Sbjct: 860 SLTNMWNAKKSTTELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRG 919
Query: 1231 SQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSL 1290
SQ++VES L+R+ +++++ +SPG V Q A+EC+PLVMEPES FY P++VLDFQSL
Sbjct: 920 SQFKVESFLIRICKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSL 979
Query: 1291 YPSMMIAYNLCFCTCLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPP 1348
YPS+MI YN C+ T +G++ + S EN LGVS F ++L LK+++ I PNGV+Y
Sbjct: 980 YPSIMIGYNYCYSTMIGRVREINSTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKT 1039
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAG 1408
VRK L ++L +IL R+M+K+ + ++ L R+ N +QLALKL+ANVTYGYT+A
Sbjct: 1040 SVRKSTLSKMLTDILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSAS 1099
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
FSGRMPC++LADSIVQ GR TLEKAI + ++E W AKV+YGDTD
Sbjct: 1100 FSGRMPCSDLADSIVQTGRETLEKAIDIIEKDETWNAKVVYGDTD 1144
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 50/211 (23%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
S S+ F +++ + D+YM+ P P + SL + ++VP IRV+G+ P G +
Sbjct: 16 SSSKSDYFRIQLNNQDYYMSKPTFLDPSHG---ESLPLNQFSQVPNIRVFGALPTGHQVL 72
Query: 61 LHIHRALPYLYVP----CADIPVQLRQEDDGYMH-AISLALEKALKVKGS-----AGSKR 110
H+H LPY+++ D LR + +H + + + + K K AG K
Sbjct: 73 CHVHGILPYMFIKYDGQITDTST-LRHQRCAQVHKTLEVKIRASFKRKKDDKHDLAGDKL 131
Query: 111 QHVHECSLVRAKKG---------------------------------GAVFDKSLQPHES 137
+++ + V KG G +F K + +ES
Sbjct: 132 GNLNFVADVSVVKGIPFYGYHVGWNLFYKISLLNPSCLSRISELIRDGKIFGKKFEIYES 191
Query: 138 HIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
HIP+LLQ+ D+NL+G +++ + FR PV
Sbjct: 192 HIPYLLQWTADFNLFGCSWINVDRCYFRSPV 222
>gi|190407794|gb|EDV11059.1| DNA polymerase zeta subunit [Saccharomyces cerevisiae RM11-1a]
Length = 1504
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/525 (38%), Positives = 301/525 (57%), Gaps = 49/525 (9%)
Query: 944 GFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN-----DSDHAVEI 998
G Q + + LT L++E+ A +R D PDP D ++++ E D D A E
Sbjct: 654 GKQKRKKSSVHDSLTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEG 713
Query: 999 YVLLYCKSESH------QRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQ 1052
++++ SE Q + IP V E +F ++ DPDIL G++I
Sbjct: 714 IMIVHKASEDSTFPTKIQHCINEIP---VMFYESEFEMFEALTDLVLLLDPDILSGFEIH 770
Query: 1053 GGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLA 1111
S G++ ER + ++ +++R + K D+
Sbjct: 771 NFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDT----------------------- 807
Query: 1112 KDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR 1171
WG H+SG+ + GR ++N+WR +R +V L YT+E+ A +L +++P F
Sbjct: 808 --------WGYAHSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFE 859
Query: 1172 VLTK-WFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRG 1230
LT W A + Y + RA++N++++ + D I R E AR+ GIDF SV RG
Sbjct: 860 SLTNMWNAKKSTTELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRG 919
Query: 1231 SQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSL 1290
SQ++VES L+R+ +++++ +SPG V Q A+EC+PLVMEPES FY P++VLDFQSL
Sbjct: 920 SQFKVESFLIRICKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSL 979
Query: 1291 YPSMMIAYNLCFCTCLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPP 1348
YPS+MI YN C+ T +G++ + S EN LGVS F ++L LK+++ I PNGV+Y
Sbjct: 980 YPSIMIGYNYCYSTMIGRVREINSTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKT 1039
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAG 1408
VRK L ++L +IL R+M+K+ + ++ L R+ N +QLALKL+ANVTYGYT+A
Sbjct: 1040 SVRKSTLSKMLTDILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSAS 1099
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
FSGRMPC++LADSIVQ GR TLEKAI + ++E W AKV+YGDTD
Sbjct: 1100 FSGRMPCSDLADSIVQTGRETLEKAIDIIEKDETWNAKVVYGDTD 1144
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 50/211 (23%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
S S+ F +++ + D+YM+ P P + SL + ++VP IRV+G+ P G +
Sbjct: 16 SSSKSDYFRIQLNNQDYYMSKPTFLDPSHG---ESLPLNQFSQVPNIRVFGALPTGHQVL 72
Query: 61 LHIHRALPYLYVP----CADIPVQLRQEDDGYMH-AISLALEKALKVKGS-----AGSKR 110
H+H LPY+++ D LR + +H + + + + K K AG K
Sbjct: 73 CHVHGILPYMFIKYDGQITDTST-LRHQRCAQVHKTLEVKIRASFKRKKDDKHDLAGDKL 131
Query: 111 QHVHECSLVRAKKG---------------------------------GAVFDKSLQPHES 137
+++ + V KG G +F K + +ES
Sbjct: 132 GNLNFVADVSVVKGIPFYGYHVGWNLFYKISLLNPSCLSRISELIRDGKIFGKKFEIYES 191
Query: 138 HIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
HIP+LLQ+ D+NL+G ++L + FR PV
Sbjct: 192 HIPYLLQWTADFNLFGCSWINLDRCYFRSPV 222
>gi|365991463|ref|XP_003672560.1| hypothetical protein NDAI_0K01260 [Naumovozyma dairenensis CBS 421]
gi|343771336|emb|CCD27317.1| hypothetical protein NDAI_0K01260 [Naumovozyma dairenensis CBS 421]
Length = 1499
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/551 (38%), Positives = 320/551 (58%), Gaps = 54/551 (9%)
Query: 926 SQISGPDGRSKPTPLSQIGFQDPA-----SAGAGEQLTLLSIEVQAESRGDLRPDPRYDS 980
SQI G TP + F DP+ + + LT LS+E +RGD RPDP+ D
Sbjct: 633 SQIEGA------TPKHKYYFSDPSIRKKKGSKIYDSLTHLSLETHINTRGDKRPDPKKDE 686
Query: 981 INVVALAFENDS---DHAVE---IYVLLYCKSES-HQRSL-VGIPDCKVFVCSKEIHLFS 1032
+ ++ E++S D +E I V+L +++ QR + V E +F
Sbjct: 687 VTMITWCIEDESFPFDLNMETEGIMVVLTDLTDTLKQRKFEQAARNTSVAFYETEFDMFE 746
Query: 1033 HFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEIS 1091
++ DPDI+ G+++ S G++ ER + +L +ISR K +
Sbjct: 747 ALTDLILLCDPDIISGFEVHMSSWGYIIERCNIIHKFDILEEISRVHSRWKKKS------ 800
Query: 1092 ERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMY 1151
+D WG TH+SG+ V GR V+N+WR +R E+ L Y
Sbjct: 801 -------------------------KDIWGYTHSSGISVTGRHVINIWRALRSEMNLTQY 835
Query: 1152 TVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV-EYVVGRAKLNLEIMNQLDMIN 1210
T+E + VLR ++P ++ LT + + + V Y + R +LN++++ + + I
Sbjct: 836 TIENITYNVLRERLPHFSYQSLTDMWNDNCSISNLKTVINYWLLRTRLNIKLLQKQEFIP 895
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
+T E AR+ GIDF SV RGSQY+VES L+R+ ++++L ++PG QV Q A+EC+PLV
Sbjct: 896 KTIEQARLIGIDFNSVSYRGSQYKVESFLIRICKSESFLLLAPGKKQVRKQKALECVPLV 955
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI--LPSKENTLGVSSFRPDLHV 1328
MEPES FY P+VVLDFQSLYPS++ AYN C+ T LG++ L + N +GV++ + ++
Sbjct: 956 MEPESSFYKSPLVVLDFQSLYPSIITAYNYCYSTMLGRVRELKTFGNEIGVTNINIEKNL 1015
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
LR L++++ I PNG++Y+ P VRK L ++L EIL R+MVK+ + L+ + ++ N
Sbjct: 1016 LRLLENDVTIAPNGMVYLKPSVRKSTLAKMLTEILDIRVMVKKTMSDLSQDNNKMKKLLN 1075
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVI 1448
+QLALKL+ANVTYGYT+A FSGRMPC++LADS+VQ GR TLEKAI + NEKW AKV+
Sbjct: 1076 NKQLALKLLANVTYGYTSASFSGRMPCSDLADSVVQTGRETLEKAIKLIEANEKWSAKVV 1135
Query: 1449 YGDTDRYTVCI 1459
YGDTD V +
Sbjct: 1136 YGDTDSLFVYL 1146
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 36/202 (17%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
DS ++ F++++ D YM P SL + N+VPVIR+YG+ P G + H
Sbjct: 9 DSSLSADFFNIQLNDYDFYMTKPTVLDKSHGISLPLHQFNQVPVIRIYGNLPTGHQVLCH 68
Query: 63 IHRALPYLYV----PCADIPVQLRQEDDGYMHAISLALEKALK--VKGSAGSKRQHVHEC 116
+H PY++V D V L Q+ + + ++K K + G ++
Sbjct: 69 VHGVTPYIFVEYDGKLTDSSVVLNQKCTQLHTQLEQIVFDSMKNNNKKTTGMSLDYISNV 128
Query: 117 SLVRAK------------------------------KGGAVFDKSLQPHESHIPFLLQFL 146
S+V+A + G + K + E+HIP+LLQF
Sbjct: 129 SVVKAVPFYGFHVGWQLFYKISILNPSFVNRIADIIRDGKLLIKKDEVFEAHIPYLLQFS 188
Query: 147 VDYNLYGMGHLHLSKLKFRHPV 168
DYNL+G + L K FR P+
Sbjct: 189 ADYNLFGCDWIKLKKCHFRKPL 210
>gi|302697887|ref|XP_003038622.1| hypothetical protein SCHCODRAFT_80794 [Schizophyllum commune H4-8]
gi|300112319|gb|EFJ03720.1| hypothetical protein SCHCODRAFT_80794 [Schizophyllum commune H4-8]
Length = 1541
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/533 (39%), Positives = 303/533 (56%), Gaps = 45/533 (8%)
Query: 926 SQISGPDGRSKPTPLSQIGFQ-DPASAGA---GEQLTLLSIEVQAESRGDLRPDPRYDSI 981
SQI GP T G + P AGA + +T S+E+ +RG L PDP D I
Sbjct: 673 SQIEGP------TQADIYGLKASPGDAGAYRERQTMTKFSLELLVPTRGHLLPDPSEDII 726
Query: 982 NVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSF 1041
V + + + ++ + L D K+ E+ L + + +
Sbjct: 727 AAVFYCHQQADGQLLPVQIIAVDGPQLRPERLR---DLKIQCVDTELDLLNMVVDTVVDL 783
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLA 1101
DPDI+ GW+ Q S G+L R G+ + + + R P +A +G+
Sbjct: 784 DPDIIAGWEAQTQSWGYLVARGNDYGLDIADLMGRAPPRRAASA-------QGL------ 830
Query: 1102 EPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
D WG + + V GR VLN+WRLMR E+ L++Y+ E VA VL
Sbjct: 831 ----------------DRWGLRKGTTIKVPGRHVLNIWRLMRTELTLSVYSFENVAFHVL 874
Query: 1162 RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
RR++P+ LT+WF S + + Y+ R ++LEI+ +++ + +E ARVFG+
Sbjct: 875 RRRVPAYNHATLTRWFNSDVPHHTTQALHYLANRTLMDLEILEGSEVVTKNAEFARVFGV 934
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADP 1281
DF+SVL+RGSQ++VES + RLA ++Y+ +SP V Q A EC+PL+MEP S FY+ P
Sbjct: 935 DFYSVLTRGSQFKVESFMFRLAKPESYVLLSPSKIDVGKQNAAECMPLIMEPTSAFYSSP 994
Query: 1282 VVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPP 1340
++VLDFQSLYPS+MIAYN + TCLG+I P + GV+ L+D++ I P
Sbjct: 995 LLVLDFQSLYPSVMIAYNYSYDTCLGRITPFQGRYKFGVTDLNIPKGTYELLQDDINISP 1054
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
NG+ YV ++R+G+L R+L E+L TR+MVKQA+K + + L RI NARQL LK I+NV
Sbjct: 1055 NGIAYVKQRIRRGLLGRMLTELLDTRVMVKQAMKGVP--DKALQRILNARQLGLKYISNV 1112
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
TYGYT+A +SGRMP E+ADSIVQ GR TLEKAI +N + KW A+V+YGDTD
Sbjct: 1113 TYGYTSATYSGRMPAVEIADSIVQTGRETLEKAIDLINSHPKWGAQVVYGDTD 1165
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 42/192 (21%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYG-STPAGQKTCLH 62
SQ VRI IDH M PP P L P+IR+YG S+ G+K C+H
Sbjct: 12 SQDPRTTLRVRINQIDHIMIPPGP--------LDKSTKPWAPIIRIYGASSITGRKACVH 63
Query: 63 IHRALPYLYVPC-ADI-PVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVR 120
+H+ PY ++ D+ P ++Q H++ A+ +LK + A +K Q+V LV+
Sbjct: 64 VHQVYPYFFIEYKGDLDPKCVKQYIAKLTHSLDHAIAVSLK-RDPASNKAQYVRAIVLVK 122
Query: 121 A------------------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYN 150
+ ++ + +ESH+ + LQFL D+
Sbjct: 123 GIHFYGYHSTYSPFLKVLMIDPNIVRRAVTILQSPSIMSTQFRVYESHLSYYLQFLSDFG 182
Query: 151 LYGMGHLHLSKL 162
LYG G + ++++
Sbjct: 183 LYGCGWMDMAEV 194
>gi|401623294|gb|EJS41398.1| rev3p [Saccharomyces arboricola H-6]
Length = 1502
Score = 388 bits (997), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/537 (37%), Positives = 312/537 (58%), Gaps = 52/537 (9%)
Query: 938 TPLSQIGFQDPASAGAGEQ---------LTLLSIEVQAESRGDLRPDPRYDSINVVALAF 988
TP S+ ++ + + E+ LT L++E+Q +RGD PDP D ++++
Sbjct: 640 TPRSKFLYKFASDSSVKEERKEKKVHDSLTHLTLEIQVNTRGDKVPDPIVDEVSMILWCL 699
Query: 989 EN-----DSDHAVEIYVLLY--CKSESHQRSLVG-IPDCKVFVCSKEIHLFSHFIKILCS 1040
E D D A E ++++ K S + + D V E +F ++
Sbjct: 700 EEETFPLDLDIAYEGIMIVHKDFKDNSFPTQIQQCVGDIPVMFYETESDMFEALTDLVLL 759
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNM 1099
FDPDIL G++I S G++ ER + ++ +++R SK D+
Sbjct: 760 FDPDILSGFEIHNSSWGYIIERCQKVHQFDIIKELARVKYPSKSKTSDT----------- 808
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
WG H+SG+ V GR ++N+WR +R +V L YTVE++A
Sbjct: 809 --------------------WGYAHSSGISVTGRHIINIWRALRSDVNLTQYTVESLAYN 848
Query: 1160 VLRRKIPSIPFRVLTKWFASGPGRARYR-CVEYVVGRAKLNLEIMNQLDMINRTSELARV 1218
+L R++P ++ LT + G + + V Y + RA++N++++ + D I R E AR+
Sbjct: 849 LLHRRLPHFSYKSLTNMWNGKNGSTKLKTVVSYWLSRAQINIQLLRKQDYIARNIEQARL 908
Query: 1219 FGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFY 1278
GIDF SV RGSQ++VES L+R+ +++++ +SPG V Q A+EC+PLVMEPES FY
Sbjct: 909 IGIDFHSVYYRGSQFKVESFLIRICKSESFILLSPGKKDVRKQKALECVPLVMEPESAFY 968
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK--ENTLGVSSFRPDLHVLRDLKDEL 1336
P+VVLDFQSLYPS+MI YN C+ T +G++ + +N LGV+ F ++L +KD++
Sbjct: 969 KSPLVVLDFQSLYPSIMIGYNYCYSTMIGRVREIRLVDNELGVAKFSLPRNILTLVKDDV 1028
Query: 1337 LIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKL 1396
I PNGV+Y +RK L ++L +IL R+M+K+ + +++ L R+ N +QLALKL
Sbjct: 1029 TIAPNGVIYAKTSLRKSTLSKMLTDILDIRVMIKKTMNEISDDNLTLKRLLNNKQLALKL 1088
Query: 1397 IANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
+ANVTYGYT+A FSGRMPC++LADSIVQ GR TLEKAI + +++ W AKV+YGDTD
Sbjct: 1089 LANVTYGYTSASFSGRMPCSDLADSIVQTGRETLEKAIDIIEKDDTWNAKVVYGDTD 1145
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 50/211 (23%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
S+ S F ++ + D YM+ P P SL + + VP IRV+G+ G + H+
Sbjct: 18 SKAHSKYFRFQLNNHDFYMSKPTPLDPSHGESLPLNQFDRVPTIRVFGALSTGHQVLCHV 77
Query: 64 HRALPYLYVP----CADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQ-------- 111
H LPY+++ +D LR + +H I LE+ LK + G K +
Sbjct: 78 HGILPYIFIKYDGYISDTST-LRHQRCAQVHKI---LERKLKACFTKGKKDKDNSNSDKL 133
Query: 112 ----HVHECSLVRAK------------------------------KGGAVFDKSLQPHES 137
+V S+V+ + G +FD + +ES
Sbjct: 134 GNLAYVANVSVVKGIPFYGYHVGWSLFYKISLLNPSSVNRISELIRNGTIFDNKFETYES 193
Query: 138 HIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
HI +LLQ+ D+NL+G +++ + FR P+
Sbjct: 194 HISYLLQWTADFNLFGCSWINVDECYFRSPI 224
>gi|259149989|emb|CAY86792.1| Rev3p [Saccharomyces cerevisiae EC1118]
Length = 1504
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/518 (38%), Positives = 299/518 (57%), Gaps = 49/518 (9%)
Query: 951 AGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN-----DSDHAVEIYVLLYCK 1005
+ + LT L++E+ A +R D PDP D ++++ E D D A E ++++
Sbjct: 661 SSVHDSLTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEGIMIVHKA 720
Query: 1006 SESH------QRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFL 1059
SE Q + IP V E +F ++ DPDIL G++I S G++
Sbjct: 721 SEDSTFPTKIQHCINEIP---VMFYESEFEMFEALTDLVLLLDPDILSGFEIHNFSWGYI 777
Query: 1060 AERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED 1118
ER + ++ +++R + K D+
Sbjct: 778 IERCQKIHQFDIVRELARVKCQIKTKLSDT------------------------------ 807
Query: 1119 EWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTK-WF 1177
WG H+SG+ + GR ++N+WR +R +V L YT+E+ A +L +++P F LT W
Sbjct: 808 -WGYAHSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFESLTNMWN 866
Query: 1178 ASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVES 1237
A + Y + RA++N++++ + D I R E AR+ GIDF SV RGSQ++VES
Sbjct: 867 AKKSTTELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVES 926
Query: 1238 MLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIA 1297
L+R+ +++++ +SPG V Q A+EC+PLVMEPES FY P++VLDFQSLYPS+MI
Sbjct: 927 FLIRICKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIG 986
Query: 1298 YNLCFCTCLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVL 1355
YN C+ T +G++ + S EN LGVS F ++L LK+++ I PNGV+Y VRK L
Sbjct: 987 YNYCYSTMIGRVREINSTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTL 1046
Query: 1356 PRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPC 1415
++L +IL R+M+K+ + ++ L R+ N +QLALKL+ANVTYGYT+A FSGRMPC
Sbjct: 1047 SKMLTDILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSASFSGRMPC 1106
Query: 1416 AELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
++LADSIVQ GR TLEKAI + ++E W AKV+YGDTD
Sbjct: 1107 SDLADSIVQTGRETLEKAIDIIEKDETWNAKVVYGDTD 1144
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 50/211 (23%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
S S+ F +++ + D+YM+ P P + SL + ++VP IRV+G+ P G +
Sbjct: 16 SSSKSDYFRIQLNNQDYYMSKPTFLDPSHG---ESLPLNQFSQVPNIRVFGALPTGHQVL 72
Query: 61 LHIHRALPYLYVP----CADIPVQLRQEDDGYMH-AISLALEKALKVKGS-----AGSKR 110
H+H LPY+++ D LR + +H + + + + K K AG K
Sbjct: 73 CHVHGILPYMFIKYDGQITDTST-LRHQRCAQVHKTLEVKIRASFKRKKDDKHDLAGDKL 131
Query: 111 QHVHECSLVRAKKG---------------------------------GAVFDKSLQPHES 137
+++ + V KG G +F K + +ES
Sbjct: 132 GNLNFVADVSVVKGIPFYGYHVGWNLFYKISLLNPSCLSRISELIRDGKIFGKKFEIYES 191
Query: 138 HIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
HIP+LLQ+ D+NL+G +++ + FR PV
Sbjct: 192 HIPYLLQWTADFNLFGCSWINVDRCYFRSPV 222
>gi|427785295|gb|JAA58099.1| Putative dna polymerase [Rhipicephalus pulchellus]
Length = 4474
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 315/556 (56%), Gaps = 82/556 (14%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVV 984
SQ+ GP GR + G + PA LT+LS+EV +R DLRPDP YD + V
Sbjct: 3641 TSQLDGPTGR-----FALSGARLPADTE--RVLTVLSVEVHVRTRSDLRPDPEYDPVQCV 3693
Query: 985 ----------------ALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEI 1028
A+ + S ++ + + H R+ V P + V E+
Sbjct: 3694 LWCARGYGMDAPLEAGAMHWATVSGDPRQVDIEDIAGTSLH-RTGVATPSLRTQVVRSEL 3752
Query: 1029 HLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDS 1088
L + ++ +DPD+L+G+D++ S G+L ERA HL + L +SR P
Sbjct: 3753 DLLHAVVDLVHRWDPDVLLGYDVERASWGYLCERAEHLDLDLYARLSRAP---------- 3802
Query: 1089 EISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKL 1148
P + +L GRI+L WR++R EV L
Sbjct: 3803 -------------PPPGRKDIL---------------------GRILLGAWRILRKEVAL 3828
Query: 1149 NMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDM 1208
N+YT E V+ R++P FR+L++WF+ R+R VE+ RA+ NLE++++L++
Sbjct: 3829 NIYTFENTYYHVMHRRVPLYSFRLLSEWFSKD--LFRWRTVEHYALRARGNLELLDELNV 3886
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
+TS++A +FGI F+ VLSRGSQ+RVESMLLRLA + +A+S Q A Q A E +P
Sbjct: 3887 FGKTSQMASIFGIQFYEVLSRGSQFRVESMLLRLARSHRMVALSASTAQRARQRAPEFIP 3946
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN-----TLGVSSFR 1323
LV+EP + Y DPVVVLDFQSLYPS++I++N CF TCLG++ EN G SS
Sbjct: 3947 LVLEPRAQLYTDPVVVLDFQSLYPSVIISHNYCFSTCLGRV----ENLGSSAPFGCSSLE 4002
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
L +++L+D + + P GV +V P +R+G+LP++L+E+L TRIMVK+A+ + + + L
Sbjct: 4003 VPLQCVKNLRDHITVSPAGVAFVKPSIRRGLLPQMLDEVLGTRIMVKKAMSQC--TNKGL 4060
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
R+ +A+QL+LKLI+NVTYGYTAA FSGRMPC E+ADS+V GR LE+AI E
Sbjct: 4061 QRVLDAQQLSLKLISNVTYGYTAASFSGRMPCVEVADSVVSKGREALEQAIRTA-EATVP 4119
Query: 1444 KAKVIYGDTDRYTVCI 1459
A+V+YGDTD V +
Sbjct: 4120 GARVVYGDTDSLFVLL 4135
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 41/192 (21%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+F++R+V++DHY+A P D S L G +V +VPV+R++G TPAGQK CLH+H ALPY
Sbjct: 1 MFALRLVTLDHYLAAPSAPLDPLVSKLGGWEVWQVPVLRIFGVTPAGQKACLHVHGALPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAG---SKRQHVHECSLVRAKK--- 123
L VPC E A+ LA E L + +AG S +HVH ++ R +
Sbjct: 61 LTVPCT--------EPRPERFAVVLASEIDLLLNTAAGRATSMHRHVHHVAVFRGTRLYG 112
Query: 124 ---------------------------GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGH 156
G V +++QPHE+HIP+ LQF+VD+ L+GM
Sbjct: 113 FHDREETFLRIYLYNPNHVPKVAELLLSGHVLKQTMQPHEAHIPYALQFMVDHKLHGMSF 172
Query: 157 LHLSKLKFRHPV 168
+ + KFR P+
Sbjct: 173 VRVESFKFRRPL 184
>gi|6325090|ref|NP_015158.1| Rev3p [Saccharomyces cerevisiae S288c]
gi|118901|sp|P14284.1|DPOZ_YEAST RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3
gi|172387|gb|AAA34968.1| DNA polymerase (pot.); putative [Saccharomyces cerevisiae]
gi|1370353|emb|CAA97873.1| REV3 [Saccharomyces cerevisiae]
gi|1403542|emb|CAA65554.1| P2535 protein [Saccharomyces cerevisiae]
gi|285815375|tpg|DAA11267.1| TPA: Rev3p [Saccharomyces cerevisiae S288c]
gi|392295841|gb|EIW06944.1| Rev3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1504
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/525 (38%), Positives = 300/525 (57%), Gaps = 49/525 (9%)
Query: 944 GFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN-----DSDHAVEI 998
G Q + + LT L++E+ A +R D PDP D ++++ E D D A E
Sbjct: 654 GKQKRKKSSVHDSLTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEG 713
Query: 999 YVLLYCKSESH------QRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQ 1052
++++ SE Q + IP V E +F ++ DPDIL G++I
Sbjct: 714 IMIVHKASEDSTFPTKIQHCINEIP---VMFYESEFEMFEALTDLVLLLDPDILSGFEIH 770
Query: 1053 GGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLA 1111
S G++ ER + ++ +++R + K D+
Sbjct: 771 NFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDT----------------------- 807
Query: 1112 KDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR 1171
WG H+SG+ + GR ++N+WR +R +V L YT+E+ A +L +++P F
Sbjct: 808 --------WGYAHSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFE 859
Query: 1172 VLTK-WFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRG 1230
LT W A + Y + RA++N++++ + D I R E AR+ GIDF SV RG
Sbjct: 860 SLTNMWNAKKSTTELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRG 919
Query: 1231 SQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSL 1290
SQ++VES L+R+ +++++ +SPG V Q A+EC+PLVMEPES FY P++VLDFQSL
Sbjct: 920 SQFKVESFLIRICKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSL 979
Query: 1291 YPSMMIAYNLCFCTCLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPP 1348
YPS+MI YN C+ T +G++ + EN LGVS F ++L LK+++ I PNGV+Y
Sbjct: 980 YPSIMIGYNYCYSTMIGRVREINLTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKT 1039
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAG 1408
VRK L ++L +IL R+M+K+ + ++ L R+ N +QLALKL+ANVTYGYT+A
Sbjct: 1040 SVRKSTLSKMLTDILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSAS 1099
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
FSGRMPC++LADSIVQ GR TLEKAI + ++E W AKV+YGDTD
Sbjct: 1100 FSGRMPCSDLADSIVQTGRETLEKAIDIIEKDETWNAKVVYGDTD 1144
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 50/211 (23%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
S S+ F +++ + D+YM+ P P + SL + ++VP IRV+G+ P G +
Sbjct: 16 SSSKSDYFRIQLNNQDYYMSKPTFLDPSHG---ESLPLNQFSQVPNIRVFGALPTGHQVL 72
Query: 61 LHIHRALPYLYVP----CADIPVQLRQEDDGYMH-AISLALEKALKVKGS-----AGSKR 110
H+H LPY+++ D LR + +H + + + + K K AG K
Sbjct: 73 CHVHGILPYMFIKYDGQITDTST-LRHQRCAQVHKTLEVKIRASFKRKKDDKHDLAGDKL 131
Query: 111 QHVHECSLVRAKKG---------------------------------GAVFDKSLQPHES 137
+++ + V KG G +F K + +ES
Sbjct: 132 GNLNFVADVSVVKGIPFYGYHVGWNLFYKISLLNPSCLSRISELIRDGKIFGKKFEIYES 191
Query: 138 HIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
HIP+LLQ+ D+NL+G +++ + FR PV
Sbjct: 192 HIPYLLQWTADFNLFGCSWINVDRCYFRSPV 222
>gi|321470469|gb|EFX81445.1| hypothetical protein DAPPUDRAFT_303502 [Daphnia pulex]
Length = 794
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/450 (45%), Positives = 285/450 (63%), Gaps = 31/450 (6%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I + +V + E LF K++ ++PDI++G++I+ S G+L +R LGI + N +
Sbjct: 27 AIVNFEVISVTSEFDLFQELAKLVNFWNPDIVVGYEIEMLSWGYLLQRGTVLGIHVQNQL 86
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
SR P G GI ++ IIE + S + +GGRI
Sbjct: 87 SRIP-------GAFPDRHGGIPED----------------IIEGGYMVEKNSDITIGGRI 123
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
VLN+WR++R E+ L YT E + +L R++ + PF LT+W+ S R++ VE+ V
Sbjct: 124 VLNLWRILRVEIALQSYTFENMVFHILHRRVSTFPFEKLTRWWKSN--HDRWQVVEHYVS 181
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
R + N+E+M QLD+I RTSELAR+FGI F+ V +RGSQYRVESM+LRLA +N++A+SP
Sbjct: 182 RVRGNMELMEQLDVIGRTSELARLFGIQFYEVFTRGSQYRVESMMLRLAKPKNFIAVSPS 241
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
Q + A E LPL++EPES FY DPV+VLDFQSLYPSM+IAYN C+ TCLG+ +
Sbjct: 242 VVQRSRMKAPEWLPLILEPESKFYTDPVLVLDFQSLYPSMIIAYNYCYSTCLGRTQLLGK 301
Query: 1315 N---TLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
N G + V+R L +D + I P G ++V P+VR G++P++L EIL+TRIMV
Sbjct: 302 NEPFEFGCTQLLIPPAVVRKLVKQDLVNISPAGAVFVKPEVRTGIIPQMLSEILNTRIMV 361
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
KQ++K+ L R+F +RQL LKLIANVTYGYT+A FSGRMPC EL DS+V GR T
Sbjct: 362 KQSMKEYE-GDTTLRRVFESRQLGLKLIANVTYGYTSANFSGRMPCVELGDSVVSKGRET 420
Query: 1430 LEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
LE+AI + E +WKA+V+YGDTD V +
Sbjct: 421 LERAIHLIEERSEWKARVVYGDTDSVFVLL 450
>gi|349581651|dbj|GAA26808.1| K7_Rev3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1504
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/525 (38%), Positives = 300/525 (57%), Gaps = 49/525 (9%)
Query: 944 GFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN-----DSDHAVEI 998
G Q + + LT L++E+ A +R D PDP D ++++ E D D A E
Sbjct: 654 GKQKRKKSSVHDSLTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEG 713
Query: 999 YVLLYCKSESH------QRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQ 1052
++++ SE Q + IP V E +F ++ DPDIL G++I
Sbjct: 714 IMIVHKASEDSTFPTKIQHCINEIP---VMFYESEFEMFEALTDLVLLLDPDILSGFEIH 770
Query: 1053 GGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLA 1111
S G++ ER + ++ +++R + K D+
Sbjct: 771 NFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDT----------------------- 807
Query: 1112 KDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR 1171
WG H+SG+ + GR ++N+WR +R +V L YT+E+ A +L +++P F
Sbjct: 808 --------WGYAHSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFE 859
Query: 1172 VLTK-WFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRG 1230
LT W A + Y + RA++N++++ + D I R E AR+ GIDF SV RG
Sbjct: 860 SLTNMWNAKKSTTELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRG 919
Query: 1231 SQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSL 1290
SQ++VES L+R+ +++++ +SPG V Q A+EC+PLVMEPES FY P++VLDFQSL
Sbjct: 920 SQFKVESFLIRICKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSL 979
Query: 1291 YPSMMIAYNLCFCTCLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPP 1348
YPS+MI YN C+ T +G++ + EN LGVS F ++L LK+++ I PNGV+Y
Sbjct: 980 YPSIMIGYNYCYSTMIGRVREINLTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKT 1039
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAG 1408
VRK L ++L +IL R+M+K+ + ++ L R+ N +QLALKL+ANVTYGYT+A
Sbjct: 1040 SVRKSTLSKMLTDILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSAS 1099
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
FSGRMPC++LADSIVQ GR TLEKAI + ++E W AKV+YGDTD
Sbjct: 1100 FSGRMPCSDLADSIVQTGRETLEKAIDIIEKDETWNAKVVYGDTD 1144
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 50/211 (23%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
S S+ F +++ + D+YM+ P P + SL + ++VP IRV+G+ P G +
Sbjct: 16 SSSKSDYFRIQLNNQDYYMSKPTFLDPSHG---ESLPLNQFSQVPNIRVFGALPTGHQVL 72
Query: 61 LHIHRALPYLYVP----CADIPVQLRQEDDGYMH-AISLALEKALKVKGS-----AGSKR 110
H+H LPY+++ D LR + +H + + + + K K AG K
Sbjct: 73 CHVHGILPYMFIKYDGQITDTST-LRHQRCAQVHKTLEVKIRASFKRKKDDKHDLAGDKL 131
Query: 111 QHVHECSLVRAKKG---------------------------------GAVFDKSLQPHES 137
+++ + V KG G +F K + +ES
Sbjct: 132 GNLNFVADVSVVKGIPFYGYHVGWNLFYKISLLNPSCLSRISELIRDGKIFGKKFEIYES 191
Query: 138 HIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
HIP+LLQ+ D+NL+G +++ + FR PV
Sbjct: 192 HIPYLLQWTADFNLFGCSWINVDRCYFRSPV 222
>gi|256274231|gb|EEU09139.1| Rev3p [Saccharomyces cerevisiae JAY291]
Length = 1504
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/525 (38%), Positives = 300/525 (57%), Gaps = 49/525 (9%)
Query: 944 GFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN-----DSDHAVEI 998
G Q + + LT L++E+ A +R D PDP D ++++ E D D A E
Sbjct: 654 GKQKRKKSSVHDSLTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEG 713
Query: 999 YVLLYCKSESH------QRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQ 1052
++++ SE Q + IP V E +F ++ DPDIL G++I
Sbjct: 714 IMIVHKASEDSTFPTKIQHCINEIP---VMFYESEFEMFEALTDLVLLLDPDILSGFEIH 770
Query: 1053 GGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLA 1111
S G++ ER + ++ +++R + K D+
Sbjct: 771 NFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDT----------------------- 807
Query: 1112 KDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR 1171
WG H+SG+ + GR ++N+WR +R +V L YT+E+ A +L +++P F
Sbjct: 808 --------WGYAHSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFE 859
Query: 1172 VLTK-WFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRG 1230
LT W A + Y + RA++N++++ + D I R E AR+ GIDF SV RG
Sbjct: 860 SLTNMWNAKKSTTELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRG 919
Query: 1231 SQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSL 1290
SQ++VES L+R+ +++++ +SPG V Q A+EC+PLVMEPES FY P++VLDFQSL
Sbjct: 920 SQFKVESFLIRICKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSL 979
Query: 1291 YPSMMIAYNLCFCTCLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPP 1348
YPS+MI YN C+ T +G++ + EN LGVS F ++L LK+++ I PNGV+Y
Sbjct: 980 YPSIMIGYNYCYSTMIGRVREINLTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKT 1039
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAG 1408
VRK L ++L +IL R+M+K+ + ++ L R+ N +QLALKL+ANVTYGYT+A
Sbjct: 1040 SVRKSTLSKMLTDILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSAS 1099
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
FSGRMPC++LADSIVQ GR TLEKAI + ++E W AKV+YGDTD
Sbjct: 1100 FSGRMPCSDLADSIVQTGRETLEKAIDIIEKDETWNAKVVYGDTD 1144
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 50/211 (23%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
S S+ F +++ + D+YM+ P P + SL + ++VP IRV+G+ P G +
Sbjct: 16 SSSKSDYFRIQLNNQDYYMSKPTFLDPSHG---ESLPLNQFSQVPNIRVFGALPTGHQVL 72
Query: 61 LHIHRALPYLYVP----CADIPVQLRQEDDGYMH-AISLALEKALKVKGS-----AGSKR 110
H+H LPY+++ D LR + +H + + + + K K AG K
Sbjct: 73 CHVHGILPYMFIKYDGQITDTST-LRHQRCAQVHKTLEVKIRASFKRKKDDKHDLAGDKL 131
Query: 111 QHVHECSLVRAKKG---------------------------------GAVFDKSLQPHES 137
+++ + V KG G +F K + +ES
Sbjct: 132 GNLNFVADVSVVKGIPFYGYHVGWNLFYKISLLNPSCLSRISELIRDGKIFGKKFEIYES 191
Query: 138 HIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
HIP+LLQ+ D+NL+G ++L + FR PV
Sbjct: 192 HIPYLLQWTADFNLFGCSWINLDRCYFRSPV 222
>gi|151942632|gb|EDN60978.1| DNA polymerase zeta subunit [Saccharomyces cerevisiae YJM789]
Length = 1504
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/525 (38%), Positives = 300/525 (57%), Gaps = 49/525 (9%)
Query: 944 GFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN-----DSDHAVEI 998
G Q + + LT L++E+ A +R D PDP D ++++ E D D A E
Sbjct: 654 GKQKRKKSSVHDSLTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEG 713
Query: 999 YVLLYCKSESH------QRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQ 1052
++++ SE Q + IP V E +F ++ DPDIL G++I
Sbjct: 714 IMIVHKASEDSTFPTKIQHCINEIP---VMFYESEFEMFEALTDLVLLLDPDILSGFEIH 770
Query: 1053 GGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLA 1111
S G++ ER + ++ +++R + K D+
Sbjct: 771 NFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDT----------------------- 807
Query: 1112 KDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR 1171
WG H+SG+ + GR ++N+WR +R +V L YT+E+ A +L +++P F
Sbjct: 808 --------WGYAHSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFE 859
Query: 1172 VLTK-WFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRG 1230
LT W A + Y + RA++N++++ + D I R E AR+ GIDF SV RG
Sbjct: 860 SLTNMWNAKKSTTELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRG 919
Query: 1231 SQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSL 1290
SQ++VES L+R+ +++++ +SPG V Q A+EC+PLVMEPES FY P++VLDFQSL
Sbjct: 920 SQFKVESFLIRICKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSL 979
Query: 1291 YPSMMIAYNLCFCTCLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPP 1348
YPS+MI YN C+ T +G++ + EN LGVS F ++L LK+++ I PNGV+Y
Sbjct: 980 YPSIMIGYNYCYSTMIGRVREINLTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKT 1039
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAG 1408
VRK L ++L +IL R+M+K+ + ++ L R+ N +QLALKL+ANVTYGYT+A
Sbjct: 1040 SVRKSTLSKMLTDILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSAS 1099
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
FSGRMPC++LADSIVQ GR TLEKAI + ++E W AKV+YGDTD
Sbjct: 1100 FSGRMPCSDLADSIVQTGRETLEKAIDIIEKDETWNAKVVYGDTD 1144
Score = 73.6 bits (179), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 50/211 (23%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
S S+ F +++ + D+YM+ P P + SL + ++VP IRV+G+ P G +
Sbjct: 16 SSSKSDYFRIQLNNQDYYMSKPTFLDPSHG---ESLPLNQFSQVPNIRVFGALPTGHQVL 72
Query: 61 LHIHRALPYLYVP----CADIPVQLRQEDDGYMH-AISLALEKALKVKGS-----AGSKR 110
H+H LPY+++ D LR + +H + + + + K K AG K
Sbjct: 73 CHVHGILPYMFIKYDGQITDTST-LRHQRCAQVHKTLEVKIRASFKRKKDDKHDLAGDKL 131
Query: 111 QHVHECSLVRAKKG---------------------------------GAVFDKSLQPHES 137
+++ + V KG G +F K + +ES
Sbjct: 132 GNLNFVADVSVVKGIPFYGYHVGWNLFYKISLLNPSCLSRISELIRDGKIFGKKFEIYES 191
Query: 138 HIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
HIP+LLQ+ D+NL+G +++++ FR PV
Sbjct: 192 HIPYLLQWTADFNLFGCSWINVNRCYFRSPV 222
>gi|254583932|ref|XP_002497534.1| ZYRO0F07766p [Zygosaccharomyces rouxii]
gi|238940427|emb|CAR28601.1| ZYRO0F07766p [Zygosaccharomyces rouxii]
Length = 1482
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/519 (40%), Positives = 300/519 (57%), Gaps = 42/519 (8%)
Query: 946 QDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS-----DHAVE-IY 999
++ +S + LT S+E+ E+ G +PDP + + +V E +S D + E I
Sbjct: 638 EEKSSIFSPNTLTHFSMEIHVETEGSKKPDPVRNEVKMVVWCLEKESFPFDLDISHEGIL 697
Query: 1000 VLLYCKSESHQRSLV--GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLG 1057
++ +E H + + G D V E+ +F ++ FD DIL G++I GS G
Sbjct: 698 AVVDQTAEPHLANHIVQGAGDVPVAFYKTEMDMFDALTDLVLFFDTDILSGFEIHDGSWG 757
Query: 1058 FLAERA-AHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAII 1116
++ ER H GI + D SR K A
Sbjct: 758 YIIERCRKHYGIEISEDFSRVNSNLKNKA------------------------------- 786
Query: 1117 EDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKW 1176
D WG THASG+ + GR ++NVWR MR E+ L Y++E +A +L +IP F+ LT+
Sbjct: 787 RDRWGFTHASGIMIAGRHMINVWRSMRSELNLTQYSLENLAFELLDERIPRFSFQALTQL 846
Query: 1177 FASGPGRARYRCV-EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRV 1235
+ + + + V Y + R ++N+ ++ + D I R E AR+ GIDF+SV RGSQY+V
Sbjct: 847 WRNRQHPSNVKTVINYWMTRVRMNIRLLQKQDYIARIVEQARLTGIDFYSVYYRGSQYKV 906
Query: 1236 ESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMM 1295
ES+L RL +++L++SP QV +Q A+EC+PLVMEPES FY PVVVLDFQSLYPS+M
Sbjct: 907 ESILFRLCKQEDFLSLSPSRKQVKNQRALECVPLVMEPESAFYKSPVVVLDFQSLYPSIM 966
Query: 1296 IAYNLCFCTCLGKILP-SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGV 1354
IAYNLC+ T +G++ +N LGV+ F + L++ I NG++YV R
Sbjct: 967 IAYNLCYSTMVGRVRDLDFKNELGVTKFPFPKNAFNTLEEHTRITANGIVYVKSSYRNST 1026
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMP 1414
L R+LE++L TR +VK+ + + L ++ N RQLALKLIANVTYGYT+A FSGRMP
Sbjct: 1027 LARMLEDLLYTRRLVKKTMSDVGSKNSSLQKLLNRRQLALKLIANVTYGYTSASFSGRMP 1086
Query: 1415 CAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
C++LAD+IVQ GR LEKAI F+ NEKW AKVIYGDTD
Sbjct: 1087 CSDLADTIVQTGREILEKAIEFIEANEKWGAKVIYGDTD 1125
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 63/239 (26%)
Query: 34 SSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAIS 93
+SL + + VPVIR+YG P+G + H+H PY+++ +Q+ M+
Sbjct: 43 NSLPMNQYSSVPVIRIYGCLPSGHQAVCHVHGIFPYIFIGYDG----KKQDSSTDMNHRC 98
Query: 94 LALEKAL--KVKGSAGSKRQ-----------HVHECSLVRAK------------------ 122
L + L K + AG + ++ S+V+A
Sbjct: 99 AKLHRLLESKCQEFAGKNEKVPSGQPLGALSYIANVSVVKAVPFYGFHVGWSLFYKISLL 158
Query: 123 ------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPD 170
+ G +F K ++ +E+H+P+LLQF VD+NL+G + ++ FR P+ +
Sbjct: 159 NPGLVNKFSDWIRDGKMFGKRVESYETHLPYLLQFSVDFNLFGCSWMDFNQCYFREPLLN 218
Query: 171 AFFP--------------RKFNYSSKQA--SADFQVIGCGSYPMHLMGHQIKTLSGLNI 213
R+F + + A DF +G G + ++ I+ + L
Sbjct: 219 PILSLDVLLMNQDLKTILRRFYHPNSNALCKKDFPRMGNGLLEIDIIPQYIRNIDNLQF 277
>gi|383864467|ref|XP_003707700.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Megachile
rotundata]
Length = 1647
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/509 (41%), Positives = 296/509 (58%), Gaps = 44/509 (8%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS--------DHAVEIYVLLYCKSES 1008
LT+LS+EV ++G L P+P +++I + A D DH I V ++E
Sbjct: 815 LTILSVEVHVNTQGKLLPNPEHNAIEAIFYAVYADVPSSQVDRIDHGA-ILVNSSIQNEK 873
Query: 1009 HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI 1068
+ C + S E +L + IK++ DPDIL+GW+I+ S G++ +RAAH+G
Sbjct: 874 VKNIHTTSNMCAISYVSNEENLLNSLIKLIRYCDPDILIGWEIESASWGYIFQRAAHIGF 933
Query: 1069 G-LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
+ ISR + + G +L KD + S
Sbjct: 934 NSFMWQISRISNVTSASKGQ---------------------MLDKDTL----------SD 962
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ V GRIVL+VWR+MR E+ L YT E V V+R ++P F+ L+ W+ ++R
Sbjct: 963 IKVPGRIVLDVWRIMRHEIALLNYTFENVMYNVMRERVPCPSFQTLSHWWKHNSITIQWR 1022
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
+ + V R + I+ LD+I +T E AR+ GI F+ + SRGSQ+RVESM+LRLA N
Sbjct: 1023 VITHYVIRVVGTIRILIHLDIIGKTCEHARLIGIQFYEIFSRGSQFRVESMMLRLAKPLN 1082
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
Y+A+SP Q A+ A + LPL+MEP+S FY DP++VLDFQSLYPS++IAYN CF TCLG
Sbjct: 1083 YIAVSPSIQQKANMRAPQALPLIMEPQSIFYTDPLIVLDFQSLYPSIIIAYNYCFSTCLG 1142
Query: 1308 KILPSKEN---TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILS 1364
++ N G ++ R + L+ ++ P GV +V P+VR G+LPR+L EIL+
Sbjct: 1143 RVEHIGLNEPFEFGATTLRIKKSTVTKLQGKINFSPCGVAFVKPEVRLGILPRMLTEILN 1202
Query: 1365 TRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
TR+MVK ++K Q L R+ +++QL LKLIANVTYGYTAA FSGRMPC E+ DS+V
Sbjct: 1203 TRLMVKASMKLHGNENQALQRVLHSQQLGLKLIANVTYGYTAANFSGRMPCIEIGDSVVS 1262
Query: 1425 CGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
GR TLE+AI V KW A+V+YGDTD
Sbjct: 1263 KGRETLERAIKIVESTPKWGAQVVYGDTD 1291
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 109/188 (57%), Gaps = 36/188 (19%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FS+ +V++D Y + PIP D+ +S +G ++ VPV+R++GSTP+G KTCLHIH PY
Sbjct: 1 MFSISLVTLDSYQSTPIPELDVTFSEFRGTEIKYVPVVRIFGSTPSGTKTCLHIHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLV--------- 119
+Y+PC + D +M+ ++ A++ + V GSA S QHV++ +
Sbjct: 61 IYIPCI-----INNNVDSFMYKLAAAIDSGINVSLGSAVSNTQHVYKIQRISGIPLYGYH 115
Query: 120 ------------------RAK---KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
RA + G + ++S QPHE+HIPF+LQF++DYNLYGM ++
Sbjct: 116 EKEHLFFKIYFYNPAMIKRAADLLQNGTILNQSFQPHEAHIPFILQFMIDYNLYGMSLIN 175
Query: 159 LSKLKFRH 166
L +KFRH
Sbjct: 176 LKHVKFRH 183
>gi|367000956|ref|XP_003685213.1| hypothetical protein TPHA_0D01380 [Tetrapisispora phaffii CBS 4417]
gi|357523511|emb|CCE62779.1| hypothetical protein TPHA_0D01380 [Tetrapisispora phaffii CBS 4417]
Length = 1503
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/514 (40%), Positives = 306/514 (59%), Gaps = 42/514 (8%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS---DHAVEIYVLLYCKSESHQRSL 1013
LT L++EV +SR D PDP++D I ++ + DS D + ++ E L
Sbjct: 669 LTHLTLEVHTQSRHDKVPDPKHDRIQLIIWKVDEDSFPFDLNISTEGVMIVVEEKTDPEL 728
Query: 1014 VGI-----PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL-G 1067
+GI + V + E+ +F I ++ FDPDIL G+++Q S G+++ER H+
Sbjct: 729 LGIITSAIGNLPVGIYYSELEMFDAIIDLILFFDPDILSGFEVQKSSWGYMSERCTHVYK 788
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
LN+I R T+N K++ +WG +H +
Sbjct: 789 FDFLNEICRAT---------------KYTNN------------RKNS----KWGTSHTTS 817
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ V GR VLN+WR MR EV L YTVE +A VL +++P + LT+ + S
Sbjct: 818 ISVPGRHVLNIWRAMRSEVNLKQYTVEILAYEVLHKRLPRFSSQYLTELWNSRDITKIRT 877
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
V Y + R ++N+ ++ + D I R E AR+ GIDF+SV RGSQ+ VES+L+RL +++
Sbjct: 878 VVFYWINRVRVNVSLLKKQDYIERIIEQARLIGIDFYSVYYRGSQFNVESVLVRLCKSES 937
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
+L +SP V +Q +EC+PLVMEP+S FY P+VVLDFQSLYPS+M+AYN C+ T LG
Sbjct: 938 FLLLSPSKDDVRNQKPLECVPLVMEPDSLFYKSPLVVLDFQSLYPSVMMAYNYCYSTMLG 997
Query: 1308 KI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
++ + N +GV+S D ++L LKD+++I PNG+ +V P VRK L ++L EIL+T
Sbjct: 998 RVNEMSYVGNKIGVTSINYDENILTLLKDDIIISPNGIAFVKPSVRKSTLTKMLNEILTT 1057
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R +VK+ +K L L+R+ N+RQLALKL+ANVTYGY +A FSGRMP ++L+D+IVQ
Sbjct: 1058 RFLVKKTMKDLPAENSKLNRLMNSRQLALKLLANVTYGYASASFSGRMPNSDLSDAIVQT 1117
Query: 1426 GRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
GR L+ AI F+ +EK+ AKV+Y DTD V +
Sbjct: 1118 GREILQNAIEFIEGSEKYGAKVVYADTDSLFVYL 1151
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 72/184 (39%), Gaps = 54/184 (29%)
Query: 34 SSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV---------------PCADIP 78
+SL K VPVIR++GS P G + H+H PY+YV C++I
Sbjct: 44 TSLPLHKFENVPVIRIFGSLPTGHQVLCHVHGIYPYIYVGYDGSIHDISTVMNQKCSNIH 103
Query: 79 VQLRQEDDGYMHAISLALEKALKV----KGSAGSKRQHVHECSLVRAK------------ 122
+L + + L +K K K + ++V S+V+
Sbjct: 104 SKLEN-----LSRVQLGNQKNDKASSHSKNDNNHRLKYVANVSIVKGIPFYGYHVGWSLF 158
Query: 123 ------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKF 164
+ G +F Q +E+HIP+ LQF D+NL+G L L F
Sbjct: 159 YKISFLKPHFVNRISDLIRNGDLFKNGAQIYEAHIPYYLQFCADFNLFGCSWLELDTCYF 218
Query: 165 RHPV 168
R P+
Sbjct: 219 RKPI 222
>gi|196017075|ref|XP_002118384.1| hypothetical protein TRIADDRAFT_34116 [Trichoplax adhaerens]
gi|190579014|gb|EDV19123.1| hypothetical protein TRIADDRAFT_34116 [Trichoplax adhaerens]
Length = 740
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/417 (48%), Positives = 272/417 (65%), Gaps = 34/417 (8%)
Query: 1040 SFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNM 1099
S+DPDIL+G++IQ S G++ +RA L IGL +SR P E KI S+ +TDN
Sbjct: 3 SWDPDILIGYEIQMLSWGYVFDRAKFLKIGLAPRLSRIP-EQKIR------SQIELTDNS 55
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
LA + + L V GRI+LNVWR++R EV LN+YT E V+
Sbjct: 56 LAR---------------------YKTDLFVIGRILLNVWRIVRSEVTLNIYTFENVSYH 94
Query: 1160 VLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVF 1219
VL +++P F LT++F R ++ +EY + R + N ++N+LD + TSE AR+F
Sbjct: 95 VLHQRVPHYSFETLTEYFNQDSHR--WKTIEYYLMRCRSNFLLLNELDTVGLTSEFARLF 152
Query: 1220 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA 1279
GI F+SVLSRGSQ+RVESM+LR+A NY+A+SP Q A A E + L++EPES FY+
Sbjct: 153 GIPFYSVLSRGSQFRVESMMLRIAKPMNYIAVSPSPDQRAMMRAPEVISLILEPESRFYS 212
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLG---KILPSKENTLGVSSFRPDLHVLRDLKDEL 1336
DPVVVLDFQSLYPS++IAYN CF TCLG I+ + G ++ R L ++ +K++
Sbjct: 213 DPVVVLDFQSLYPSIIIAYNYCFSTCLGNVKNIITDESRQFGCTTLRVPLATMKKIKEDY 272
Query: 1337 LIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKL 1396
+ P G+ +V +RKGVLPR+LEEIL+TR+MVK A+KK + L R+ NARQL LKL
Sbjct: 273 TVSPTGLAFVKSNIRKGVLPRMLEEILNTRVMVKGAMKK-NKGDKALERLLNARQLGLKL 331
Query: 1397 IANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
I+NVTYGYT+A FSGRMPC E+ DSIV R TL +AI V +WKAKV+YGDTD
Sbjct: 332 ISNVTYGYTSANFSGRMPCVEIGDSIVAKARETLTRAIHLVENTPEWKAKVVYGDTD 388
>gi|443719046|gb|ELU09367.1| hypothetical protein CAPTEDRAFT_153186 [Capitella teleta]
Length = 768
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/444 (46%), Positives = 282/444 (63%), Gaps = 32/444 (7%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G PD V E L I+++ +DPDIL+G++IQ S GF+ +RA HL + L+ +
Sbjct: 6 GFPDLHVTYVPTEEQLIDELIQLVRKWDPDILVGFEIQKASWGFIIKRACHLNLNLIKLL 65
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
SR D+ +SE D A+ + AE++ S + + GRI
Sbjct: 66 SRL-------HEDNPVSENKQAD---ADDLEAEAI----------------SDIKISGRI 99
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
V+N+WR++R E+ LN+YT E V L +++P FR L+ W+ + R+R +EY
Sbjct: 100 VINLWRVLRHELTLNVYTFENVVFHALHKRVPRYSFRCLSDWYDNKTDLHRWRVIEYYTI 159
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
R+ + IM LD+I+ TSE ARVFGI+F+ VLSRGSQYRVESM+LR+A NY+ +SP
Sbjct: 160 RSSDCIAIMKHLDLISTTSEFARVFGIEFYHVLSRGSQYRVESMMLRIAKPLNYIPVSPS 219
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-LPSK 1313
Q A+Q A EC+PL MEP S FY PVVVLDFQSLYPS+MIAYN CF +CLG++ +K
Sbjct: 220 PQQRAAQRAPECIPLTMEPVSRFYTHPVVVLDFQSLYPSIMIAYNYCFTSCLGRLDCLAK 279
Query: 1314 EN----TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
G SS VL+ L+ ++ I PNGV++ VRKGVLP ++EEIL+TR+MV
Sbjct: 280 AGYGPFNFGCSSLNIPPSVLKSLEKDVNICPNGVVFANQSVRKGVLPLMVEEILNTRLMV 339
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K+++K + L ++ +ARQL LKLIANVT+GYTAA FSGRMP E+ DSIV+ R T
Sbjct: 340 KKSMKD-CKDDKTLQKMLHARQLGLKLIANVTFGYTAASFSGRMPLVEVGDSIVRKARET 398
Query: 1430 LEKAISFVNENEKWKAKVIYGDTD 1453
LE+AI+ V + +W+AKV+YGDTD
Sbjct: 399 LERAIALVEDTPRWQAKVVYGDTD 422
>gi|189234256|ref|XP_001811647.1| PREDICTED: similar to DNA polymerase zeta catalytic subunit
[Tribolium castaneum]
gi|270002615|gb|EEZ99062.1| hypothetical protein TcasGA2_TC004938 [Tribolium castaneum]
Length = 1518
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/525 (41%), Positives = 301/525 (57%), Gaps = 62/525 (11%)
Query: 944 GFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLY 1003
FQ+ + + LT+LS+E+ E+RGDLRPDP YDSI V D V+
Sbjct: 707 NFQNAKALNECQYLTILSLELHIETRGDLRPDPAYDSIRAVFYKIVEDGPGGTTSGVI-- 764
Query: 1004 CKSESHQRSLVGIP----DCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFL 1059
+L G+ C + S E L + +K++ + DPDIL+G++I+ S G+L
Sbjct: 765 --------TLDGVKPSEVRCDLLNVSTEEELLNELVKLVQNHDPDILVGYEIEMCSWGYL 816
Query: 1060 AERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE 1119
+R LG L+ ++R + ++
Sbjct: 817 LDRGQALGHALVTSLAR---------------------------------------VREK 837
Query: 1120 WGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFAS 1179
R S L + GRI+L+VWRL+R EV L YT E + +L ++IP F+ L W+ +
Sbjct: 838 HSRNEDS-LRITGRILLDVWRLLRHEVALQSYTFENIVYHLLHQRIPLYSFKQLALWWHN 896
Query: 1180 GPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESML 1239
R+R + + + R L+I+ QLD+I RTSELAR+FGI FF VLSRGSQ+RVESM+
Sbjct: 897 P--LFRHRTISHYLFRTSGVLQILEQLDLIGRTSELARLFGIQFFEVLSRGSQFRVESMM 954
Query: 1240 LRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYN 1299
LRLA N++ +SP Q A A E LPL++EPES Y DPV+VLDFQSLYPSM+IAYN
Sbjct: 955 LRLAKPLNFIPVSPSVQQRAKMKAPEFLPLILEPESKLYVDPVIVLDFQSLYPSMIIAYN 1014
Query: 1300 LCFCTCLGKILPSKENT---LGVSSFR-PDLHVLRDLKDELL-IPPNGVMYVPPKVRKGV 1354
CF TCLGK+ +N G + + V + L D+ + P GV +V +VR G+
Sbjct: 1015 YCFSTCLGKVANLGKNAPFEFGATQLKVSKKQVEKLLNDDCVNFSPCGVAFVKKQVRDGI 1074
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMP 1414
LPR+L EIL TR+MVK A+K+ Q+L ++ ++RQL LKLIANVTYGYT+A FSGRMP
Sbjct: 1075 LPRMLREILDTRLMVKNAMKR-NKDDQLLQKVLHSRQLGLKLIANVTYGYTSANFSGRMP 1133
Query: 1415 CAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
E+ DS+V GR TL++AI V ++W A+V+YGDTD V +
Sbjct: 1134 AVEVGDSVVSKGRETLQRAIELVETTKEWGARVVYGDTDSLFVLV 1178
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 104/185 (56%), Gaps = 36/185 (19%)
Query: 12 SVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLY 71
++RIV++D+YM+ PI DI YS +G +++VP IR++GST GQK CLH+H PYLY
Sbjct: 6 AIRIVNVDYYMSAPIQDLDIMYSDFRGSSISQVPTIRIFGSTAEGQKICLHVHGVFPYLY 65
Query: 72 VPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA--------- 121
IP ++ + + I+ +++KAL V G A + QHV++ +LV
Sbjct: 66 -----IPYDGSEDCNSLKYQIAASIDKALNVSFGQASALTQHVYKITLVSGIPFYGYHTR 120
Query: 122 ---------------KKGGAVFDKSL------QPHESHIPFLLQFLVDYNLYGMGHLHLS 160
+K G + + QPHESHIP++LQF++DYNL+GM + L+
Sbjct: 121 EHQFFKIYLYNPNLIRKVGNMLQSEVIHGRLYQPHESHIPYILQFMIDYNLHGMSRILLN 180
Query: 161 KLKFR 165
LKFR
Sbjct: 181 DLKFR 185
>gi|328780807|ref|XP_003249865.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Apis
mellifera]
Length = 1633
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/519 (40%), Positives = 294/519 (56%), Gaps = 42/519 (8%)
Query: 946 QDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND-----SDHAVEIYV 1000
Q S + LT+L+IE+ +RG PDP +DSI + A ND +E V
Sbjct: 791 QTARSLNMHQYLTILAIEIHVITRGKFLPDPNHDSIEAIFYAIYNDVPLSSKIDQIEHGV 850
Query: 1001 LLYCKS--ESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGF 1058
+L S S +++ C S E L + I ++ DPDIL+GW+I+ S G+
Sbjct: 851 ILLNSSIKNSKVKNIYSSNTCTTSYVSSEEDLLNSLIILIRHCDPDILIGWEIEFLSWGY 910
Query: 1059 LAERAAHLGIG-LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIE 1117
+ RA+H+G+ ++ ISR I+ G S
Sbjct: 911 IFHRASHIGLNNFMSQISRISNAFPISKGQS----------------------------- 941
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
+ + + S + GRI+ +VWR+MR E+ L YT E V V+ +I F++LT+W+
Sbjct: 942 --FDKDNFSDTQIPGRIIFDVWRVMRHEIALLNYTFENVMYNVMHERISCPTFQMLTEWW 999
Query: 1178 ASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVES 1237
++R + + + R L I+ LD+I +T E AR+FGI F+ V SRGSQ+RVES
Sbjct: 1000 NHENMTMQWRVITHYIIRVVGTLRILIHLDIIGQTCEHARLFGIQFYEVFSRGSQFRVES 1059
Query: 1238 MLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIA 1297
M+LRLA NY+ +SP Q A A E LPL+MEP+S FY DP+VVLDFQSLYPS++IA
Sbjct: 1060 MMLRLAKPLNYIPVSPSIQQRARMRAPESLPLIMEPQSAFYTDPLVVLDFQSLYPSIIIA 1119
Query: 1298 YNLCFCTCLGKIL---PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGV 1354
YN CF TCLG+I + G ++ + + + L ++ P GV +V P++R G+
Sbjct: 1120 YNYCFSTCLGRIEHIGQYEPYEFGTTTLKIKKNTAQKLVGKINFAPCGVAFVKPEIRMGI 1179
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMP 1414
LPR+L EIL+TR+M+K ++K L RI ++QL LKLIANVTYGYTAA FSGRMP
Sbjct: 1180 LPRMLSEILNTRLMIKNSMKLYGNDNNTLQRILYSQQLGLKLIANVTYGYTAANFSGRMP 1239
Query: 1415 CAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
C E+ DS+V GR TLE+AI V +KW A+V+YGDTD
Sbjct: 1240 CIEIGDSVVSKGRETLERAIKIVESTDKWGAEVVYGDTD 1278
Score = 140 bits (352), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 107/188 (56%), Gaps = 36/188 (19%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FS+ +V +D Y + P+ D+ +S +G ++ +VP+IR++GST +G KTCLH+H PY
Sbjct: 1 MFSINLVVLDSYQSTPLSELDVTFSDFRGNEIRQVPIIRIFGSTLSGIKTCLHVHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLV--------- 119
+Y+PC + D +M+ ++ ++ A+ + GSA S QHV++ V
Sbjct: 61 IYIPCT-----INNNVDSFMYKLAAGIDSAINISLGSAMSNIQHVYKIQQVYGIPLYGYH 115
Query: 120 ------------------RAK---KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
RA + G V +++LQPHE+HIPF+LQF++DYNLYGM ++
Sbjct: 116 EKKHLFFKIYFYNPAIIKRAADLLQNGMVLNQTLQPHEAHIPFILQFMIDYNLYGMSLIN 175
Query: 159 LSKLKFRH 166
L +KFR
Sbjct: 176 LKDVKFRQ 183
>gi|345482629|ref|XP_001607949.2| PREDICTED: DNA polymerase zeta catalytic subunit [Nasonia
vitripennis]
Length = 2007
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 240/641 (37%), Positives = 340/641 (53%), Gaps = 73/641 (11%)
Query: 831 LYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSSLKGSDIRPVLEEMHQEADEM 890
L +RP +SPPS +SV WL +K + ++ ++ S I
Sbjct: 1069 LIAIRPLYSPPSRESVESWLKAKEKREQKEKEEKEKVEKEMEKSSI-------------- 1114
Query: 891 ISTEPTPDLN-GVTAIMHNEG---HIAEPNACADCLQDISQISGPDGR-SKPTPLSQIGF 945
TPD++ ++ I H E H+ + S + DG K L+ F
Sbjct: 1115 ----ATPDVSLSLSKIFHPEDFSHHLGVSCGQIEFNSRSSVVDIEDGNLGKAKALTTYQF 1170
Query: 946 QDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYC- 1004
LT+L ++V +R +L PDPR D I V A ND L C
Sbjct: 1171 -----------LTVLCLDVHPITRPNLLPDPRQDRIAAVFYAIHNDVPPDWNQAKPLDCG 1219
Query: 1005 -------KSESHQRSLVGIPDCK--VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGS 1055
K S + L G + + + KE +F + ++ DP+IL+GWDI+ S
Sbjct: 1220 VIIVDPEKVNSKIKKLNGGTEQEQSLIYVEKEEDVFEEVVSLIQRCDPEILIGWDIEFLS 1279
Query: 1056 LGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAI 1115
G+L +RA+ G L ISR P S ++ + T+ L + +
Sbjct: 1280 WGYLFQRASVFGKNLSGKISRIP--SAKCNWETRAHDESTTE------------LHLETL 1325
Query: 1116 IEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTK 1175
+E + + GRIVL++WR+MR E+ L YT E V V+ +IP+ F LTK
Sbjct: 1326 VE----------VKLPGRIVLDIWRIMRSEIALTGYTYENVMYNVMNERIPNPSFDTLTK 1375
Query: 1176 WFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRV 1235
W+ S ++R ++ + +++ LD+INRTSE AR++GI F+ V SRGSQ+RV
Sbjct: 1376 WWNS--SNTQWRVIDNYSNKVIGVHRLLHHLDIINRTSEHARLYGIQFYEVFSRGSQFRV 1433
Query: 1236 ESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMM 1295
ESM+LRLA NY+A+SP HQ A E LPL+MEPES Y DPVVVLDFQSLYPS++
Sbjct: 1434 ESMMLRLAKPMNYIAVSPSAHQRGCMRAPESLPLIMEPESTMYLDPVVVLDFQSLYPSII 1493
Query: 1296 IAYNLCFCTCLGKIL---PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRK 1352
IAYN CF TCLG+I G ++ + ++ + L++++ P GV +V VR+
Sbjct: 1494 IAYNYCFSTCLGRIEHIGSPHPFEFGATTLKVQKNLAKKLQNKMNFAPCGVAFVKSDVRR 1553
Query: 1353 GVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGR 1412
G+LPR+L EIL TR+MVK+AIK + + L R ++RQL LKLIANVTYGYTAA FSGR
Sbjct: 1554 GILPRMLTEILETRLMVKKAIKDHSKEDRALQRALHSRQLGLKLIANVTYGYTAANFSGR 1613
Query: 1413 MPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
MPC E+ DS+V G+ TLE+AI V +W A+V+YGDTD
Sbjct: 1614 MPCIEVGDSVVSKGKETLERAIKMVESTPEWGARVVYGDTD 1654
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 36/188 (19%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
++SVR++ D Y A PIP D +S +G + +VPV+R++G+T G+K CLHIH PY
Sbjct: 1 MYSVRLICADSYQATPIPEVDPTFSQFRGSDIKQVPVLRIFGTTQNGEKVCLHIHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLV--------- 119
LYVP + Q++ D + ++ AL+ A+ + GSA + QHV++ V
Sbjct: 61 LYVPYSG---QIKA--DILAYRLAAALDTAINISLGSAKANTQHVYKVHQVSGIPFYGYH 115
Query: 120 ------------------RAK---KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
RA + G + D+ QPHE+HIPF +QF++DYN+YGM ++
Sbjct: 116 RKNHHFFKIYFYNPAMIKRATDLLQNGCILDQVFQPHEAHIPFTMQFMIDYNIYGMSMIN 175
Query: 159 LSKLKFRH 166
L +K RH
Sbjct: 176 LRNVKHRH 183
>gi|403217770|emb|CCK72263.1| hypothetical protein KNAG_0J01820 [Kazachstania naganishii CBS 8797]
Length = 1514
Score = 382 bits (980), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/511 (39%), Positives = 298/511 (58%), Gaps = 43/511 (8%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVE-------IYVLLYCKSE 1007
+QLT +S+EV +RGD PDP D + ++ +N++ + E I ++ S
Sbjct: 677 DQLTHMSLEVHVNTRGDKNPDPLIDEVVIIFWCIDNET-YPFELPLETEGIMCVIDDFSN 735
Query: 1008 SHQRSLV--GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
HQ + + V KE +F ++ FDPDIL G+++ S G++ +R
Sbjct: 736 KHQMTKIEQACHPLTVAFYEKEFDMFDALTDLVLLFDPDILSGFEVHMSSWGYIIDRC-- 793
Query: 1066 LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
N I + S++A + +G +D WG H+
Sbjct: 794 ------NKIHKFDFISELARTSQQRKSKG----------------------KDAWGHNHS 825
Query: 1126 SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLT-KWFASGPGRA 1184
+ + + GR +LN+WRLMR + L YT+E +A +L ++P ++ LT W + +
Sbjct: 826 TDITITGRHMLNIWRLMRSNLTLTQYTIENIAYHLLHYRLPRYSYKSLTCMWNVNEMVSS 885
Query: 1185 RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
+ Y R ++N+EI+ + D I RT+E +R+ GIDF SV RGSQYRVES L R+
Sbjct: 886 LKTVIMYWQTRVRINIEILTKDDFIARTTEFSRLLGIDFHSVYHRGSQYRVESFLRRICG 945
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
++N+L +SP V Q A+EC+PL+MEPES FY P+VVLDFQSLYPS+M+A N C+ T
Sbjct: 946 SENFLLLSPSKIAVKEQKALECVPLIMEPESAFYKSPLVVLDFQSLYPSVMVAQNYCYST 1005
Query: 1305 CLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
+GK+ L ++N +GV+ + VL+ LKD++ I PNG++YV P +RK +L ++L EI
Sbjct: 1006 MIGKVGDLNLEDNKIGVTKVHLEKGVLKILKDDVNISPNGIVYVKPDIRKSMLAKMLTEI 1065
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L R+MVK+ + +L L + N RQ+ALKL+ANVTYGYT+A FSGRMPC+ELADSI
Sbjct: 1066 LDLRVMVKKTMSQLDDPPASLKKQLNNRQVALKLLANVTYGYTSASFSGRMPCSELADSI 1125
Query: 1423 VQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
VQ GR L+KAI + N+ W AKV+YGDTD
Sbjct: 1126 VQTGREILQKAIDLIEMNDHWGAKVVYGDTD 1156
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPIPGYDICY-SSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
S DS + +++ + D YM P D + +SL K VPVIR+YG+ P+G +T H
Sbjct: 14 SDLDSEMIHIQMNNYDSYMCKPSTLLDTNHGTSLPLNKYEYVPVIRIYGNIPSGHQTLCH 73
Query: 63 IHRALPYLYVP 73
+H PY+++P
Sbjct: 74 VHGIFPYIFIP 84
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 112 HVHECS-LVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
HVH + L+R GA + ++ E+HIP++LQFL D+NL+G + L K FR PV
Sbjct: 181 HVHRVTDLIR---NGAALNSDIEVFEAHIPYILQFLTDFNLFGCYWIKLQKCYFRQPV 235
>gi|241751690|ref|XP_002400982.1| DNA polymerase zeta catalytic subunit, putative [Ixodes scapularis]
gi|215508272|gb|EEC17726.1| DNA polymerase zeta catalytic subunit, putative [Ixodes scapularis]
Length = 745
Score = 381 bits (979), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/425 (48%), Positives = 277/425 (65%), Gaps = 39/425 (9%)
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPL---ESKIAAGDSEISERGITD 1097
+DPDIL+G++IQ S G+L ER + L + L + +SR P E AGD E
Sbjct: 6 WDPDILVGYEIQKSSWGYLLERGSQLRLDLASMLSRVPQSPEEHPREAGDPE-------- 57
Query: 1098 NMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVA 1157
+++L +D + V GRIVLN+WR+MR EV LN+YT E V
Sbjct: 58 --------GDAVLDRDVV--------------VPGRIVLNLWRIMRKEVTLNIYTFENVY 95
Query: 1158 ETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELAR 1217
V+ R++P F+VLT+WFA +R VE+ V RA+ NLE++++LD++ +TSE+AR
Sbjct: 96 YHVVHRRVPLYSFKVLTEWFAHDTDL--WRTVEHYVIRARGNLELLDRLDVVGKTSEMAR 153
Query: 1218 VFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGF 1277
+FGI FF VLSRGSQ+RVESM+LRLA + +A+SP Q A AME +PLVMEP+S
Sbjct: 154 IFGIQFFEVLSRGSQFRVESMMLRLARQRGLVALSPSVQQRARMRAMEFIPLVMEPQSHL 213
Query: 1278 YADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI--LPSKEN-TLGVSSFRPDLHVLRDLKD 1334
Y PV VLDFQSLYPS+MIA+N CF TCLG++ S E G SS + +L L++
Sbjct: 214 YTSPVAVLDFQSLYPSVMIAHNYCFSTCLGRLDHFGSGEPFVFGCSSLSVPVTLLNILRE 273
Query: 1335 ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLAL 1394
+ + P GV +V VR+GVLP++LEEIL+TR+MVKQ++K+ ++L ++ +ARQL L
Sbjct: 274 YISVSPAGVAFVQSSVRRGVLPQMLEEILNTRLMVKQSMKE-CKDDKVLRKVLDARQLGL 332
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDR 1454
KLI+NVTYGYTAA FSGRMPC ELADSIV GR TLE+AI V +W +VIYGDTD
Sbjct: 333 KLISNVTYGYTAASFSGRMPCVELADSIVSKGRETLERAIKTVEATSRWGGQVIYGDTDS 392
Query: 1455 YTVCI 1459
V +
Sbjct: 393 MFVLL 397
>gi|336371041|gb|EGN99381.1| hypothetical protein SERLA73DRAFT_90742 [Serpula lacrymans var.
lacrymans S7.3]
Length = 791
Score = 381 bits (979), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/434 (43%), Positives = 265/434 (61%), Gaps = 33/434 (7%)
Query: 1021 VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLE 1080
V V E+ L + I I+ DPDI++GW++Q S G++ R H G + I+R P
Sbjct: 19 VEVVPDELELLNKVIDIVIDVDPDIVVGWEVQTASWGYVNSRGRHYGFEIGELIARAPSR 78
Query: 1081 SKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWR 1140
+ D +WG +S V GR V NVWR
Sbjct: 79 NNTGGND-------------------------------QWGLRTSSTFQVIGRHVFNVWR 107
Query: 1141 LMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNL 1200
+M+ E L +YT E VA +L+R+IP F LT+W+ S R + ++ R L
Sbjct: 108 IMQVEQNLGIYTFENVAFHILKRRIPRYSFSTLTEWYKSSDPVHTSRLLRHLSERTSTVL 167
Query: 1201 EIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVAS 1260
+I+++ + + + +E ARVFG+DFFSV+SRGSQ++VES + R+A ++++ +SP V
Sbjct: 168 DILDEAETVTKNAEFARVFGVDFFSVISRGSQFKVESFMFRIAKPESFVLLSPSKEDVGK 227
Query: 1261 QPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGV 1319
Q A EC+PL+MEP S FY P+VVLDFQSLYPS+MIAYN C+ TCLG++ + +N GV
Sbjct: 228 QNAAECMPLIMEPLSAFYNGPLVVLDFQSLYPSIMIAYNYCYSTCLGRVGEFQGQNKFGV 287
Query: 1320 SSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPS 1379
+ +L+ L+D + + PNG+MYV VRKG+L R+L E+L TR+MVKQA+K A
Sbjct: 288 TELHHPAGLLQKLQDHITVAPNGIMYVKSDVRKGLLGRMLTELLETRVMVKQAMKS-ARG 346
Query: 1380 QQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE 1439
+ L RI +ARQL+LK IANVTYGYT+A +SGRMP E+ADSIVQ GR TLEKA+ +N
Sbjct: 347 NKALGRILDARQLSLKYIANVTYGYTSATYSGRMPAVEIADSIVQSGRETLEKAVRIINA 406
Query: 1440 NEKWKAKVIYGDTD 1453
+KW KV+YGDTD
Sbjct: 407 TKKWGGKVVYGDTD 420
>gi|340727622|ref|XP_003402139.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Bombus
terrestris]
Length = 1635
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/519 (39%), Positives = 295/519 (56%), Gaps = 42/519 (8%)
Query: 946 QDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI------Y 999
Q+ + LT+L++E+ +R PDP +D I + A ND + +I
Sbjct: 802 QNAKGLTVHQYLTILAVEIHVITRDKFLPDPNHDPIGAIFYAIHNDVPLSSKIEQIEHGA 861
Query: 1000 VLLYCKSESHQ-RSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGF 1058
+L+ +++ + +++ C S E L + I ++ DPDIL+GW+I+ S G+
Sbjct: 862 ILVSSLTQNTKVKNIHSANTCTTSYVSTEEDLLNSLIILVRHCDPDILIGWEIESLSWGY 921
Query: 1059 LAERAAHLGIG-LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIE 1117
+ RA+H+G+ + ISR P I+ G +
Sbjct: 922 IFHRASHIGLKDFMWQISRIPTAPPISKGQAS---------------------------- 953
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
+ + S + GRI+L+VWR+MR E+ L YT E V V+R ++ F+VLT W+
Sbjct: 954 ---DKDNFSDAKISGRIILDVWRIMRHEIALLNYTFENVMYHVMRERVSCPTFQVLTNWW 1010
Query: 1178 ASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVES 1237
R+R + + V R L I+ LD+I RT E AR+FGI F+ V SRGSQ+RVES
Sbjct: 1011 NHKSVTIRWRVITHYVIRIVGTLRILIHLDIIGRTCEHARLFGIQFYEVFSRGSQFRVES 1070
Query: 1238 MLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIA 1297
M+LRLA NY+++SP Q A A E LPL+MEP+S Y DP++VLDFQSLYPS++IA
Sbjct: 1071 MMLRLAKPLNYISVSPSIQQRARMRAPESLPLIMEPQSTLYTDPLIVLDFQSLYPSIIIA 1130
Query: 1298 YNLCFCTCLGK---ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGV 1354
YN CF TCLG+ I + G ++ + + L ++ P GV +V P++R G+
Sbjct: 1131 YNYCFSTCLGRVEHIGHYEPYEFGATTLKIKKDTAKKLFGKINFAPCGVAFVKPEIRMGI 1190
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMP 1414
LPR+L EIL+TR+MVK+++K L RI +++QL LKLIANVTYGYTAA FSGRMP
Sbjct: 1191 LPRMLTEILNTRLMVKKSMKLHGNENHALQRILHSQQLGLKLIANVTYGYTAANFSGRMP 1250
Query: 1415 CAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
C E+ DS+V GR TLE+AI V KW A+V+YGDTD
Sbjct: 1251 CIEIGDSVVSKGRETLERAIKIVESTPKWGAEVVYGDTD 1289
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 110/188 (58%), Gaps = 36/188 (19%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FS+ +V++D Y + P+ G D+ +S +G ++ +VPVIR++GSTP+G KTCLHIH PY
Sbjct: 1 MFSINLVTLDSYQSIPLLGVDVTFSDFRGNEIRQVPVIRIFGSTPSGTKTCLHIHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLV--------- 119
+Y+PC + + YM+ ++ A++ A+ V GSA S QHV++ V
Sbjct: 61 MYIPCT-----INNNVNSYMYKLAAAIDSAINVSLGSAISNTQHVYKIQQVSGIPFYGYH 115
Query: 120 ------------------RAK---KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
RA + G + +SLQPHE+HIPF+LQF++DYNLYGM ++
Sbjct: 116 EKEHLFLKIYFYNPAMIKRAADLLQNGVILGQSLQPHEAHIPFILQFMIDYNLYGMSLIN 175
Query: 159 LSKLKFRH 166
L +KFR
Sbjct: 176 LKDVKFRQ 183
>gi|350412206|ref|XP_003489571.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Bombus
impatiens]
Length = 2056
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/519 (38%), Positives = 295/519 (56%), Gaps = 42/519 (8%)
Query: 946 QDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI------Y 999
Q+ + LT+L++E+ +R PDP +D I + A ND + +I
Sbjct: 1223 QNAKGLTVHQYLTILAVEIHVITRDKFLPDPNHDPIGAIFYAIHNDVPLSSKIEQIEHGA 1282
Query: 1000 VLLYCKSESHQ-RSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGF 1058
+L+ +++ + +++ C S E L + I ++ DPDIL+GW+++ S G+
Sbjct: 1283 ILVSSLTQNTKVKNIHSANTCTTSYVSTEEDLLNSLIILVRHCDPDILIGWEVESLSWGY 1342
Query: 1059 LAERAAHLGIG-LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIE 1117
+ RA+H+G+ + ISR P I+ G +
Sbjct: 1343 IFHRASHIGLKDFMWQISRIPTAPPISKGQAS---------------------------- 1374
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
+ + S + GRI+L+VWR++R E+ L YT E V V+R ++ F++LT W+
Sbjct: 1375 ---DKDNFSDAKISGRIILDVWRIIRHEIALLNYTFENVMYHVMRERVSCPTFQILTNWW 1431
Query: 1178 ASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVES 1237
R+R + + V R L I+ LD+I RT E AR+FGI F+ V SRGSQ+RVES
Sbjct: 1432 NHKSVTIRWRVITHYVIRIVGTLRILIHLDIIGRTCEHARLFGIQFYEVFSRGSQFRVES 1491
Query: 1238 MLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIA 1297
M+LRLA NY+++SP Q A A E LPL+MEP+S Y DP++VLDFQSLYPS++IA
Sbjct: 1492 MMLRLAKPLNYISVSPSIQQRARMRAPESLPLIMEPQSTLYTDPLIVLDFQSLYPSIIIA 1551
Query: 1298 YNLCFCTCLGK---ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGV 1354
YN CF TCLG+ I + G ++ + + L ++ P GV +V P++R G+
Sbjct: 1552 YNYCFSTCLGRVEHIGHYEPYEFGATTLKIKKDTAKKLFGKINFAPCGVAFVKPEIRMGI 1611
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMP 1414
LPR+L EIL+TR+MVK+++K L RI +++QL LKLIANVTYGYTAA FSGRMP
Sbjct: 1612 LPRMLTEILNTRLMVKKSMKLHGNENHALQRILHSQQLGLKLIANVTYGYTAANFSGRMP 1671
Query: 1415 CAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
C E+ DS+V GR TLE+AI V KW A+V+YGDTD
Sbjct: 1672 CIEIGDSVVSKGRETLERAIKIVESTPKWGAEVVYGDTD 1710
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 111/188 (59%), Gaps = 36/188 (19%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FS+ +V++D Y + P+ G D+ +S +G ++ +VPVIR++GSTP+G KTCLHIH PY
Sbjct: 1 MFSINLVTLDSYQSIPLLGVDVTFSDFRGNEIRQVPVIRIFGSTPSGTKTCLHIHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLV--------- 119
+Y+PC + + YM+ ++ A++ A+ V GSA S QHV++ V
Sbjct: 61 MYIPCT-----INDNVNSYMYKLAAAIDSAINVSLGSAISNTQHVYKIQQVSGIPFYGYH 115
Query: 120 ------------------RAK---KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
RA + G +F +SLQPHE+HIPF+LQF++DYNLYGM ++
Sbjct: 116 EKEHLFLKIYFYNPAMIKRAADLLQNGVIFGQSLQPHEAHIPFILQFMIDYNLYGMSLIN 175
Query: 159 LSKLKFRH 166
L +KFR
Sbjct: 176 LKDVKFRQ 183
>gi|358055684|dbj|GAA98029.1| hypothetical protein E5Q_04709 [Mixia osmundae IAM 14324]
Length = 1838
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/496 (40%), Positives = 291/496 (58%), Gaps = 48/496 (9%)
Query: 972 LRPDPRYDSINVVALAFEND-----------SDHAVEIYVLLYCKSESHQRSLVGIPDCK 1020
LRPDP +DSI + + + S H + + V+ + H+ +G D
Sbjct: 1030 LRPDPEHDSIEALCYCLQTEDPSILRNGRLPSTH-IGMIVVEQAGIDFHR---LGFGDVV 1085
Query: 1021 VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA--AHLGIGLLNDISRTP 1078
+ V E L FI + +DP+IL G+++ S G+L +R AH G+ L+ R
Sbjct: 1086 IDVVEDEGALIDLFIDKVQHWDPEILAGFEVHKSSWGYLVDRGNVAH-GLDLVKIFGRVD 1144
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
+S ++ ED WG H S L GR VL +
Sbjct: 1145 TQS----------------------------TGRNRGKEDAWGYNHTSSLRFTGRHVLCI 1176
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
WR++RGE+ L YT+E + VL+ + P R LT+W+ R ++Y + RA +
Sbjct: 1177 WRILRGELALTQYTLENLTFHVLQERTPHYTHRTLTRWYTDDSPAHTARVLQYWLRRASI 1236
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
++E++++ ++I+R +E ARVFG+DF SVL+RGSQ++VES + R+A +++L +SP QV
Sbjct: 1237 DIELLDEAEIISRNAEFARVFGVDFMSVLTRGSQFKVESFMFRVAKPESFLLLSPDRVQV 1296
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT-L 1317
Q A EC PL+MEP+S FY DPV+VLDFQSLYPS MIAYN C+ TCLG+ K T
Sbjct: 1297 GKQNAAECQPLIMEPQSAFYTDPVLVLDFQSLYPSCMIAYNYCYSTCLGRAGLFKNTTKF 1356
Query: 1318 GVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA 1377
G ++ +L L+DEL++ PNG ++V P VRK +L ++L EIL TR M+K+++ KL
Sbjct: 1357 GTTTLDHPAGLLSLLQDELIVSPNGFVFVKPHVRKSLLSKMLSEILDTRFMIKKSM-KLV 1415
Query: 1378 PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
+ L ++ NARQL LK IANVTYGY +A FSGRMPC E+AD+IVQ GR TLE+A+S +
Sbjct: 1416 KDDKALTKMMNARQLGLKFIANVTYGYCSATFSGRMPCVEIADAIVQTGRETLERAMSTI 1475
Query: 1438 NENEKWKAKVIYGDTD 1453
+ N W A+V+YGDTD
Sbjct: 1476 HANAAWGARVVYGDTD 1491
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 52/182 (28%)
Query: 36 LQGGK-VNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCAD------IPVQLRQEDDGY 88
L GG+ +++VP IRV+GST GQ+ C+H+H PY+++ + + +RQ
Sbjct: 60 LSGGQELDKVPEIRVFGSTDQGQRCCVHVHGVFPYVFIQYSGELDPEIVNSYIRQ----L 115
Query: 89 MHAISLALEKALKVKGSAGSKRQHVHECSLVR---------------------------- 120
++ A+ K+ K + + Q+V LV+
Sbjct: 116 GRTLNAAMAKSFKREQDRKVQEQYVGFICLVKGVPFYGFHIGQQYFLKIYCLQPRHMTRL 175
Query: 121 -------------AKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
A K + + E+HIPFLLQF++D+NLYG + L + KFR
Sbjct: 176 SAILRSGKIMSKPADKASGAKSQGFEVFEAHIPFLLQFMLDHNLYGCDWIDLERCKFRGE 235
Query: 168 VP 169
+P
Sbjct: 236 LP 237
>gi|380028350|ref|XP_003697867.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Apis florea]
Length = 1818
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/519 (39%), Positives = 294/519 (56%), Gaps = 42/519 (8%)
Query: 946 QDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI----YVL 1001
Q S + LT+L+IE+ +RG PDP +DSI + A ND+ + +I + +
Sbjct: 976 QTAKSLNMHQYLTILAIEIHVITRGKFLPDPNHDSIEAIFYAIYNDAPLSSKIEQIEHGV 1035
Query: 1002 LYCKSESHQRSLVGIPDCKVFV---CSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGF 1058
+ S + I + S E L + I ++ DPDIL+GW+I+ S G+
Sbjct: 1036 ILLNSSIKNSKIKNIYSSNTYTTSYVSSEEDLLNSLIILIRHCDPDILIGWEIEFLSWGY 1095
Query: 1059 LAERAAHLGI-GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIE 1117
+ RA+H+G+ + ISR I+ G +
Sbjct: 1096 IFHRASHIGLHNFMWQISRISNAIPISKGQT----------------------------- 1126
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
+ + + S + GRI+ +VWR+MR EV L YT E V V+ +I F++LT+W+
Sbjct: 1127 --FDKDNFSDAQIPGRIIFDVWRVMRHEVALLNYTFENVMYNVMHERISCPTFQMLTEWW 1184
Query: 1178 ASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVES 1237
++R + + + R L I+ LD+I +T E AR+FGI F+ V SRGSQ+RVES
Sbjct: 1185 NHENMTMQWRVITHYIIRVVGTLRILIHLDIIGQTCEHARLFGIQFYEVFSRGSQFRVES 1244
Query: 1238 MLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIA 1297
M+LRLA NY+ +SP Q A A E LPL+MEP+S FY DP+VVLDFQSLYPS++IA
Sbjct: 1245 MMLRLAKPLNYIPVSPSVQQRARMRAPESLPLIMEPQSAFYTDPLVVLDFQSLYPSIIIA 1304
Query: 1298 YNLCFCTCLGK---ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGV 1354
YN CF TCLG+ I + G ++ + + + L ++ P GV +V P++R G+
Sbjct: 1305 YNYCFSTCLGRVEHIGQYEPFEFGTTTLKIKKNTAQKLVGKVNFAPCGVAFVKPEIRMGI 1364
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMP 1414
LPR+L EIL+TR+M+K+++K L RI ++QL LKLIANVTYGYTAA FSGRMP
Sbjct: 1365 LPRMLSEILNTRLMIKKSMKLYGNDNDTLQRILYSQQLGLKLIANVTYGYTAANFSGRMP 1424
Query: 1415 CAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
C E+ DS+V GR TLE+AI V +KW A+V+YGDTD
Sbjct: 1425 CIEIGDSVVSKGRETLERAIKIVESTDKWGAEVVYGDTD 1463
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 108/188 (57%), Gaps = 36/188 (19%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FS+ +V +D Y + P+P D+ +S +G ++ +VPVIR++GST +G KTCLH+H PY
Sbjct: 1 MFSINLVILDSYQSTPLPELDVTFSDFRGNEIRQVPVIRIFGSTLSGIKTCLHVHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLV--------- 119
+Y+PC + D +M+ ++ ++ A+ + GSA S QHV++ V
Sbjct: 61 IYIPCT-----VNNNVDSFMYKLAAGIDSAINISLGSAMSNIQHVYKIQQVYGIPLYGYH 115
Query: 120 ------------------RAK---KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
RA + G V ++SLQPHE+HIPF+LQF++DYNLYGM ++
Sbjct: 116 EKKHLFFKIYFYNPAMVKRAADLLQNGMVLNQSLQPHEAHIPFILQFMIDYNLYGMSLIN 175
Query: 159 LSKLKFRH 166
L +KFR
Sbjct: 176 LKDVKFRQ 183
>gi|367009362|ref|XP_003679182.1| hypothetical protein TDEL_0A06390 [Torulaspora delbrueckii]
gi|359746839|emb|CCE89971.1| hypothetical protein TDEL_0A06390 [Torulaspora delbrueckii]
Length = 1486
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/596 (35%), Positives = 330/596 (55%), Gaps = 62/596 (10%)
Query: 891 ISTEPTPDLNGVTA-IMHNEGHIAEPNACADCLQDISQISGPDGRSK---PTPLSQIGFQ 946
S E T + GV I H+ ++ P + A+ D+ + + +S+ P ++ ++
Sbjct: 574 FSEEHTTEDRGVKENIFHSWKYLKRPPSFAEIKADLPRKTKNRFKSQLENPISKDEMLYK 633
Query: 947 DPASAGAGEQ-------LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS---DHAV 996
A + LT ++E+ ++ G PDP+ D ++++ E DS D V
Sbjct: 634 GNTDQQAKSKNIKVHSSLTHFTLEIHVQTEGAKLPDPQKDEVSIIFWHLERDSYPFDFHV 693
Query: 997 EIYVLLYCKS--------ESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMG 1048
++ KS + QR+ IP V E LF + I+ FDPD+L G
Sbjct: 694 SPMGIMVLKSPDVDDNFTDRIQRAAGKIP---VAFYDDEFDLFDALVDIVLIFDPDLLSG 750
Query: 1049 WDIQGGSLGFLAERA--AHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVA 1106
+++ S G++ ER AH R + +I+ +S + +
Sbjct: 751 FEVHSSSWGYIIERCRQAH----------RFEIADEISRVNSSVKTK------------- 787
Query: 1107 ESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIP 1166
+ D+WG +HAS + + GR ++NVWR ++ ++ L YT+E +A R+++P
Sbjct: 788 ---------LRDQWGYSHASSIVISGRHMINVWRAVKDDLALTKYTIENIAYVAFRQRLP 838
Query: 1167 SIPFRVLTKWFASGPGRARYRCV-EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFS 1225
F+ L++ + + + + V Y V R +LN+ ++ + + I R +EL+R+ GIDF+S
Sbjct: 839 HFSFQSLSEMWRNNHNLSSAKTVLSYWVDRVELNIRLLQKQEYIPRVTELSRLTGIDFYS 898
Query: 1226 VLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVL 1285
V RGSQY++ES+L RL ++++ ++P +V Q A+EC+PLVMEPES FY P+VVL
Sbjct: 899 VYYRGSQYKIESILGRLCKAESFIMVAPSKRRVKQQNALECVPLVMEPESAFYKSPLVVL 958
Query: 1286 DFQSLYPSMMIAYNLCFCTCLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGV 1343
DFQSLYPS+M+AYN C+ T LG++ L EN +G S +L L D + I PNG+
Sbjct: 959 DFQSLYPSIMMAYNYCYSTMLGRVPELKVGENIIGASQVILPEGLLTLLADNVTISPNGI 1018
Query: 1344 MYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYG 1403
YV +RK L ++LE+IL TR MVK+ + + + R+ N+RQLALKLIANVTYG
Sbjct: 1019 AYVKSTIRKSTLAKMLEDILDTRFMVKKTMTDIGRNNAFSRRLLNSRQLALKLIANVTYG 1078
Query: 1404 YTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
YT+A FSGRMPC++LADS+VQ GR TLEKAI F+ N W AKV+YGDTD V +
Sbjct: 1079 YTSASFSGRMPCSDLADSVVQTGRETLEKAIDFIESNPDWGAKVVYGDTDSLFVYL 1134
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 42/209 (20%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
S +S + +++ D Y+ P + +SL + VP+IRVYG P+G + H+
Sbjct: 13 STLNSELIHIQLNDYDFYLTKPGRLDALHGNSLPMNEYVRVPIIRVYGHLPSGHQVLCHV 72
Query: 64 HRALPYLYVPC----ADIPVQLRQEDDGYMHAI-------SLALEKALKVKGSAGSKRQH 112
H PY+++P +D P + Q+ +H + S+ +K +K S ++
Sbjct: 73 HGVFPYIFIPYDGQDSDTPTTMNQK-CAQLHNVLEIKSQLSMVKKKDIKQFKQKISGLKY 131
Query: 113 VHECSLVRAK------------------------------KGGAVFDKSLQPHESHIPFL 142
+ S+V+ + G +F+K ++ ES +PFL
Sbjct: 132 IANVSVVKGVPFYGFNVGWSLFYKISVLDAGFTNKLSDLIRDGKMFEKPIETFESQLPFL 191
Query: 143 LQFLVDYNLYGMGHLHLSKLKFRHPVPDA 171
LQF D+NL+G + L + FR PV +A
Sbjct: 192 LQFSADFNLFGCSWVDLEQCYFRTPVLNA 220
>gi|213401351|ref|XP_002171448.1| DNA polymerase zeta catalytic subunit [Schizosaccharomyces japonicus
yFS275]
gi|211999495|gb|EEB05155.1| DNA polymerase zeta catalytic subunit [Schizosaccharomyces japonicus
yFS275]
Length = 1464
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/532 (39%), Positives = 304/532 (57%), Gaps = 40/532 (7%)
Query: 933 GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS 992
G SKP + A + LL++E A S D PDP+ D + AF+ D
Sbjct: 608 GESKPAFVQSNIITKTFKRDAFSSVKLLAMECFASSHVDKLPDPKKDKLQGCFFAFQFDP 667
Query: 993 D-HAVEIYVLLYCKS----ESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILM 1047
+ ++ + C E +Q++ P + EI L + I + DP +L
Sbjct: 668 NVEGIDGMCCILCDDTIPLELYQKAF---PHVYFILVDTEIELINEVISVTRDIDPTLLC 724
Query: 1048 GWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVA 1106
G++IQ S G++ ERA L +++SR + +G
Sbjct: 725 GYEIQQSSWGYVIERAMMQFQYDLTSELSRL---KQFESG-------------------- 761
Query: 1107 ESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIP 1166
K +D WG A+ LHV GR +LN+WRLM+GE L Y++E+V V + P
Sbjct: 762 -----KFGSKDDPWGHRKATSLHVVGRHLLNIWRLMKGEYNLFNYSLESVVSHVFDTQTP 816
Query: 1167 SIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSV 1226
L +AS R + V+Y + R +L I+ +I + E AR+ G+DF+SV
Sbjct: 817 HYSQNDLNTLWASSQLRDKLHFVQYHLSRVSYDLRILVSSAVITKVREQARIIGVDFYSV 876
Query: 1227 LSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLD 1286
+SRGSQ++VES+L R+A ++NY+ SPG Q+ Q A+ECLPLV+EP++ + +PV VLD
Sbjct: 877 ISRGSQFKVESILFRIAKSENYILPSPGPQQMTEQNALECLPLVLEPQTNLFKNPVAVLD 936
Query: 1287 FQSLYPSMMIAYNLCFCTCLGKILP-SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMY 1345
FQSLYPS++IA+NLCF TCLG + K LG + ++ D +L+ LKD++ I PNGV Y
Sbjct: 937 FQSLYPSIIIAFNLCFSTCLGYVRNIDKAQRLGFTFYQADPTLLQALKDDIYISPNGVAY 996
Query: 1346 VPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYT 1405
V VRK +L R+LEE++ TR+++K +K + +HRI N RQLALKLIANVTYGYT
Sbjct: 997 VQKNVRKSLLARMLEELIDTRLLLKSGMKDCTDAN--IHRILNGRQLALKLIANVTYGYT 1054
Query: 1406 AAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTV 1457
+A FSGRMPC+E+AD+IVQ GR LE++I+ +N E+++A+V+YGDTD V
Sbjct: 1055 SASFSGRMPCSEIADTIVQTGREILERSINIINATEQFEARVVYGDTDSLFV 1106
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 40/171 (23%)
Query: 23 APPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCA----DIP 78
AP D S+ K +PV+R++G T AG C +H PYL++ D
Sbjct: 18 APAFVKEDCLTSTRFSTKQVSLPVLRIFGLTEAGDSICCFLHNCFPYLFIDFVPEEHDDL 77
Query: 79 VQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAK---------------- 122
+Q ++ + I L ++L + S + Q V+ LV+
Sbjct: 78 IQFLKQLKQF---IEETLSRSLHLDNS---RVQLVYNIQLVKGIPFYGYHVGWRLFCKIS 131
Query: 123 --------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHL 159
+ G + S + +E+H+P+LLQFL+D+NLYG + L
Sbjct: 132 LFNPNHINKLADLFRQGRILKNSTRVYEAHVPYLLQFLIDHNLYGCDCMEL 182
>gi|320581055|gb|EFW95277.1| Catalytic subunit of DNA polymerase zeta [Ogataea parapolymorpha
DL-1]
Length = 1564
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/524 (38%), Positives = 304/524 (58%), Gaps = 42/524 (8%)
Query: 944 GFQDP--ASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS---DHAVEI 998
FQ P A +L +L++E+ +RGDL PDP D I ++ +F++ + D +E
Sbjct: 726 SFQSPIVRKANNFNKLIVLNMELHVNTRGDLFPDPLEDEIRMLFWSFDDQNYPIDLGIEG 785
Query: 999 YVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGF 1058
+ S R + P V E+ + I ++ DPDIL G++I S G+
Sbjct: 786 SGVFVVNSHEITRKHINFP---VQTFRSEVDMVRELISLVEFVDPDILSGYEIHSASWGY 842
Query: 1059 LAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED 1118
L ER + + L +++ VA L K + D
Sbjct: 843 LLER--------FRKVHKMDLGVRLSR-------------------VATKQLNK---VND 872
Query: 1119 EWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA 1178
WG THASG+ + GR +LN+WR +R E+ +N Y++E V L KIP + LT+WF
Sbjct: 873 RWGFTHASGIKITGRHMLNLWRPLRKELSINRYSLENVVWHTLHIKIPHYEHKTLTQWFL 932
Query: 1179 SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
S VEY + R ++++N++++I RT E +R GID++SV RGSQ++VES+
Sbjct: 933 SNSPGNLNNLVEYYMSRLHWQMKLINKMEIIERTVEESRFLGIDYYSVFYRGSQFKVESL 992
Query: 1239 LLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAY 1298
L+RLA +N++ ISP QV Q ++ +PL++EPES FY P++VLDFQSLYPS++IA+
Sbjct: 993 LVRLAKAENFILISPSKKQVFKQDPLQVIPLILEPESSFYKSPLLVLDFQSLYPSLVIAH 1052
Query: 1299 NLCFCTCLGKIL---PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVL 1355
NLC+ T LG++ P K TLG++S++ +L+ + + + PNG+M++ P VRK VL
Sbjct: 1053 NLCYSTLLGRLHGYDPKKTQTLGITSWKLPPGLLKLFEKHITVTPNGLMFLKPNVRKSVL 1112
Query: 1356 PRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPC 1415
++L EIL RI+VK + L + L++++N RQLALKLIANVTYGY +A +SGRMP
Sbjct: 1113 AKMLSEILDARILVKDTMNGLKDDSE-LYKLYNNRQLALKLIANVTYGYASATYSGRMPN 1171
Query: 1416 AELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
+ +AD+IV R TL AIS + +NEKW AKV+YGDTD V +
Sbjct: 1172 SAIADAIVSAARETLHSAISEIEKNEKWGAKVVYGDTDSLFVYL 1215
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 125 GAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
G +F K +QP E+HIP++LQFL DYN +G ++L K +R P+
Sbjct: 204 GKLFGKVVQPFEAHIPYMLQFLTDYNCFGCNWIYLEKAFWRSPL 247
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIP----GYDICYSSLQGGKV--NEVPVIRVYGSTP 54
+ D + D + V+++S D Y + P + + G N+VPVIRVYG
Sbjct: 7 LEDDKRDGSELKVQLISYDSYQSAPSSLDKQRFTLNNKPYSGNSTVFNQVPVIRVYGKLT 66
Query: 55 AGQKTCLHIHRALPYLYV 72
G LHIH PYLYV
Sbjct: 67 TGHTCLLHIHNVFPYLYV 84
>gi|350578361|ref|XP_003480350.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Sus scrofa]
Length = 721
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/402 (47%), Positives = 259/402 (64%), Gaps = 31/402 (7%)
Query: 1055 SLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDA 1114
S G+L +RAA L + L ISR P D +I R +
Sbjct: 3 SWGYLLQRAAALSVDLCQMISRVP--------DDKIENRFAAE----------------- 37
Query: 1115 IIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLT 1174
D++G S +++ GRI LN+WR+MR EV LN YT E V+ VL ++ P FRVL+
Sbjct: 38 --RDDYGSDTMSEINIVGRITLNLWRIMRNEVALNNYTFENVSFHVLHQRFPLFTFRVLS 95
Query: 1175 KWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYR 1234
WF + R++ V++ + R + NL+++ QLD+I +TSE+AR+FGI F VL+RGSQYR
Sbjct: 96 DWFDNKTDLYRWKMVDHYISRVRGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYR 155
Query: 1235 VESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSM 1294
VESM+LR+A NY+ ++P Q + A +C+PL+MEPES FY++ V+VLDFQSLYPS+
Sbjct: 156 VESMMLRIAKPMNYIPVTPSVQQRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSI 215
Query: 1295 MIAYNLCFCTCLGKIL---PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVR 1351
+IAYN CF TCLG + E G +S R +L ++ ++ + PNG+ +V P VR
Sbjct: 216 VIAYNYCFSTCLGHVENLGKHDEFKFGCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVR 275
Query: 1352 KGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSG 1411
KGVLPR+LEEIL TR+MVKQ++K + L R+ ARQL LKLIANVT+GYTAA FSG
Sbjct: 276 KGVLPRMLEEILKTRLMVKQSMKAYK-QDRALSRMLEARQLGLKLIANVTFGYTAANFSG 334
Query: 1412 RMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
RMPC E+ DSIV R TLE+AI VN+ +KW A+V+YGDTD
Sbjct: 335 RMPCIEVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTD 376
>gi|156846635|ref|XP_001646204.1| hypothetical protein Kpol_1013p17 [Vanderwaltozyma polyspora DSM
70294]
gi|156116878|gb|EDO18346.1| hypothetical protein Kpol_1013p17 [Vanderwaltozyma polyspora DSM
70294]
Length = 1503
Score = 375 bits (963), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/511 (37%), Positives = 299/511 (58%), Gaps = 46/511 (9%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS-----DHAVEIYVLLYCKSESH-- 1009
LT ++EV ++ G PDP+ DS+ ++A ++++ D A E + +++C E+
Sbjct: 665 LTHFTLEVHTDNIGSKFPDPKNDSVRLIAWKIDDETYPFQLDVASEGF-MIFCGPETEVS 723
Query: 1010 ----QRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
+R + EI +F I ++ FDPDIL G+++Q S G+L +R
Sbjct: 724 NYHLKRIEQAAGSSAIGFYETEIDMFDALIDLILFFDPDILSGFEVQSASWGYLIDRYRF 783
Query: 1066 LGI-GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
+ LL ++SR ++ + R I D+WG
Sbjct: 784 IQKESLLEELSRVSIDE---------ASRYI----------------------DKWGSNR 812
Query: 1125 ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRA 1184
+SG+ V GR ++N+WR MR N YT+E + +L +++P F L+K +
Sbjct: 813 SSGVKVTGRHIINIWRAMRASTNFNQYTIENLCSKLLNKRLPHFSFSDLSKMWNGNDVTE 872
Query: 1185 RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
+ Y + R + N+ ++ + + I R +E +R+ GIDF+SV RGSQY VES L+RL
Sbjct: 873 IKTVMSYWMTRVRCNMLLLKKQEYITRVTEQSRLIGIDFYSVYYRGSQYNVESFLIRLCK 932
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
++ +L +SP +V Q ++EC+PL+MEPES FY P++VLDFQSLYPS+MIAYN C+ T
Sbjct: 933 SEEFLLVSPSKEKVRDQRSLECVPLIMEPESAFYKSPLLVLDFQSLYPSIMIAYNYCYST 992
Query: 1305 CLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
LG++ L N +G ++ ++L+ LKD++ I PNGV+++ VRK +L ++L +I
Sbjct: 993 MLGRVEDLKPNGNQIGATTLSIPNNLLKLLKDDIQISPNGVVFLKSTVRKSILSKMLTDI 1052
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L TR+MVK + +L L++I N RQLALKL+ANVTYGY++A FSGRMPC++LADSI
Sbjct: 1053 LKTRVMVKNTMSELQNVSSDLNKIMNNRQLALKLLANVTYGYSSASFSGRMPCSDLADSI 1112
Query: 1423 VQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
VQ GR TL+ AI+ + N+ W AKV+YGDTD
Sbjct: 1113 VQTGRDTLQNAINLIESNDNWGAKVVYGDTD 1143
Score = 80.9 bits (198), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 86/203 (42%), Gaps = 48/203 (23%)
Query: 13 VRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
V++ D YM+ P SSL + VPVIRVYGS P G H+H PY+Y+
Sbjct: 22 VQMNCYDSYMSCPTQLDSQYGSSLPLHRFESVPVIRVYGSLPTGHTVLCHVHGVFPYIYI 81
Query: 73 ----PCADIPVQLRQEDDGYMHAI-------SLALEKALKVKGSA------GSKRQHVHE 115
D ++L Q +H + S K K KGS G++ +++
Sbjct: 82 RYDGNVYDSSLELNQRC-ARLHKLFEDKLKTSDTSSKRNKAKGSKTNRYGDGNRLKYIAN 140
Query: 116 CSLVRAK------------------------------KGGAVFDKSLQPHESHIPFLLQF 145
S+V+A + G +FD ++ ESHIP+LLQF
Sbjct: 141 VSIVKAIPFYGFNVGWSLFYKISLLNPKYSNKVSDLIRDGVMFDNEVETFESHIPYLLQF 200
Query: 146 LVDYNLYGMGHLHLSKLKFRHPV 168
DYNL+G + L K FR P+
Sbjct: 201 SSDYNLFGCSWIKLDKCYFRKPI 223
>gi|410082397|ref|XP_003958777.1| hypothetical protein KAFR_0H02330 [Kazachstania africana CBS 2517]
gi|372465366|emb|CCF59642.1| hypothetical protein KAFR_0H02330 [Kazachstania africana CBS 2517]
Length = 1499
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/511 (37%), Positives = 299/511 (58%), Gaps = 43/511 (8%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS---DHAVEIYVLLYCKSESHQR 1011
++LT S+E+ +R DL+PDP +D ++++ +++S D V ++ E
Sbjct: 661 DKLTHFSLEIHVNTRDDLKPDPLHDQVSIIFWKIDDESYPFDFGVSSEGIMVLHDEREDG 720
Query: 1012 SLVGI-----PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
+L + V E +F ++ FDPDIL G+++ S G++ ER +
Sbjct: 721 TLSKMLQDAAGSVPVAFYESEFMMFDALTDLVLLFDPDILSGYEVHLSSWGYIIERCIKV 780
Query: 1067 -GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
++ +ISR + K ++ D WG TH+
Sbjct: 781 HKFNIIEEISRVISKGKNSSYDF-------------------------------WGYTHS 809
Query: 1126 SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
+G+ V GR +LN+WR++ +++L YTVE +A +L +++P R LT+++ + ++
Sbjct: 810 TGITVTGRHILNIWRILSSDLQLTQYTVENIAYNLLHKRLPHFSNRNLTEFWNNKRSFSK 869
Query: 1186 YRCV-EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
+ V +Y + R ++N E++ D I RT AR+ G+DF SV RGSQYRVES L+R+
Sbjct: 870 IKTVLQYWLTRVRINFELLKAQDFIARTMVQARLIGVDFQSVYYRGSQYRVESFLVRVCK 929
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
++++ +SP +V Q +EC+PL+MEPES FY P++VLDFQSLYPS+MIAYN C+ T
Sbjct: 930 GESFILVSPSKQKVREQKPLECVPLIMEPESAFYKSPMLVLDFQSLYPSIMIAYNYCYST 989
Query: 1305 CLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
LG++ + +N +GVSS + LR LKD++ I PNG+++V +RK L ++L ++
Sbjct: 990 LLGRVREMQLGDNEVGVSSVPIKENTLRLLKDDVTIAPNGLVFVNSSIRKSTLAKMLADV 1049
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L R+MVK+ I +L L + N Q ALKL+ANVTYGYT+A FSGRMPC++LADSI
Sbjct: 1050 LDIRVMVKKTISELGSENDTLRNLLNNEQEALKLLANVTYGYTSASFSGRMPCSDLADSI 1109
Query: 1423 VQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
VQ GR TLE+AI + +E W AKV+YGDTD
Sbjct: 1110 VQTGRETLERAIELIESDENWGAKVVYGDTD 1140
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 48/208 (23%)
Query: 9 NIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALP 68
++ V++ + D YM P SL + N VP IRVYG P G + HIH P
Sbjct: 16 DLIHVQMNNYDFYMNRPTILDRKHGDSLPMSQFNFVPSIRVYGFLPTGHQVLCHIHGVFP 75
Query: 69 YLYVPC----ADIPVQLRQEDDGYMHAISLALEKALKVKG--------SAGSKRQHVH-- 114
Y++V +D ++ Q+ + + + +K KG G+ +H+
Sbjct: 76 YIFVKYDGNESDSLTEISQKCTNLHLLLERKMTELVKKKGRGNKPTVNEVGNDIEHIRGL 135
Query: 115 ----ECSLVRAK------------------------------KGGAVFDKSLQPHESHIP 140
SL++ + A+F + + ESHIP
Sbjct: 136 NYIANVSLIKGIPFYGFNMGYTLFYKITLLNPSYSNRLSDLIRDKAIFATARETFESHIP 195
Query: 141 FLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
+LLQF +D+NL+G +HL+ FR P+
Sbjct: 196 YLLQFSMDFNLFGCSWIHLNNCYFRDPI 223
>gi|299755533|ref|XP_002912108.1| REV3 [Coprinopsis cinerea okayama7#130]
gi|298411267|gb|EFI28614.1| REV3 [Coprinopsis cinerea okayama7#130]
Length = 1574
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/555 (39%), Positives = 297/555 (53%), Gaps = 82/555 (14%)
Query: 926 SQISGPDGRSKPTPLSQIGF-QDPASAGAG----EQLTLLSIEVQAESRGDLRPDPRYDS 980
SQI GP T + GF + PA G T+LS+EV A + PDP +
Sbjct: 710 SQIEGP------TQANIYGFDESPARDTHGLRGTSNFTILSLEVFAPTGDGGLPDPEKNE 763
Query: 981 INVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCS 1040
I V A + + +++ ++ S R L + + EI L ++ + +
Sbjct: 764 IAAVFYALQTAGETSIQAAIMAVNAPPSDPRRLR---ERSIEYAHSEIDLINNIVDAVVD 820
Query: 1041 FDPDILMGWDIQGG-SLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNM 1099
DPDI+ GW+IQ G L L RA H G ND
Sbjct: 821 LDPDIITGWEIQKGLDLSELIGRAPHRYAGRSND-------------------------- 854
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
+WG S GR V N WR+MR E L MY+ E V
Sbjct: 855 -------------------QWGFRKTSTFQAVGRHVFNTWRIMRSEQTLTMYSFENVVFH 895
Query: 1160 VLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVF 1219
VLRR+ P L++W+ S +R +Y+ ++ + LEI+ + +++ +T+E ARVF
Sbjct: 896 VLRRRFPKYSQETLSRWYRSSVPAHTFRVFDYLQKKSCMVLEILEETEVVTKTAEFARVF 955
Query: 1220 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA 1279
GIDFFSV+SRGSQ++VES +LR+A ++++ ISP V Q A EC+PL+MEP S FY
Sbjct: 956 GIDFFSVISRGSQFKVESFMLRIAKPESFVLISPSKADVGKQNAAECMPLIMEPNSAFYT 1015
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN-TLGVSSFRPDLHVLRDLKDELLI 1338
P++VLDFQSLYPS+MIAYN C+ TCLG++ + GV +L LKD++ +
Sbjct: 1016 SPMIVLDFQSLYPSVMIAYNYCYSTCLGRVHHFQGTWKFGVDKLNLPEGLLGYLKDDITV 1075
Query: 1339 PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIA 1398
PNG+MYV KVR+G+L R+L E+L TR+MVKQA+K + + + L R+ +ARQLALK IA
Sbjct: 1076 APNGIMYVKSKVRQGLLGRMLTELLDTRVMVKQAMKGVK-NDKALKRVLDARQLALKFIA 1134
Query: 1399 NVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK--------------------AISFVN 1438
NVTYGYT+A FSGRMP E+ADSIVQ GR TLEK AI VN
Sbjct: 1135 NVTYGYTSATFSGRMPAVEIADSIVQTGRETLEKVKPGRLEVSSKTYDPGYDLQAIMLVN 1194
Query: 1439 ENEKWKAKVIYGDTD 1453
+KW A+V+YGDTD
Sbjct: 1195 NTKKWNAQVVYGDTD 1209
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 45/183 (24%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
F V + ID+ + P P L + VP++RVYG++ G KTC+HIH+ PY
Sbjct: 13 FRVSLDQIDYTVGPSGP--------LDNVNMPVVPILRVYGNSSTGSKTCVHIHQVYPYF 64
Query: 71 YVPCADIPVQLR-QEDDGYMHAISLALEKALKV---KGSAGSKRQHVHECSLVRAK---- 122
++ D +R +E Y+H + +L A+ + + K Q++ LV+
Sbjct: 65 FI---DYVGSVRPKEVKRYIHKLVKSLNHAIALSLKRNPESPKSQYIRAAILVKGVPFYG 121
Query: 123 --------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGH 156
+ G V + +ESH+ F LQF+ D+ LYG G
Sbjct: 122 FHSSYSPYLKIYVADPALVNRAVTILRSGIVMKARFRIYESHLSFPLQFMCDFGLYGCGF 181
Query: 157 LHL 159
L +
Sbjct: 182 LDM 184
>gi|50294045|ref|XP_449434.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528748|emb|CAG62410.1| unnamed protein product [Candida glabrata]
Length = 1481
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/549 (36%), Positives = 300/549 (54%), Gaps = 52/549 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVV 984
ISQI P S I S + LT S+E+ +RGDL PDPR D ++V+
Sbjct: 620 ISQIKKPTATKSLGNTSSI----KRSESIHDNLTHFSLEIHVNTRGDLLPDPRKDEVSVI 675
Query: 985 ALAFENDS---DHAVEIYVLLYCKS-------ESHQRSLVGIPDCKVFVCSKEIHLFSHF 1034
++D+ +++ ++Y E+ + G+P + E +F
Sbjct: 676 FWKVDSDTFPFSIDLQLEGIMYTNKLERENLIETLESISGGVP---IMEYEDEFSMFDAL 732
Query: 1035 IKILCSFDPDILMGWDIQGGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISER 1093
++ FDPD+L G++I S G++ ER+ + + N+ISR + ++
Sbjct: 733 TDLILLFDPDLLSGYEIHNSSWGYIFERSLSVHKFNIANEISRVNMGAQFK--------- 783
Query: 1094 GITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTV 1153
+ D WG +SG+ + GR VLN+WRL+R E+ + Y+
Sbjct: 784 ----------------------LRDSWGFKKSSGISITGRYVLNIWRLLRKEIAVTQYSF 821
Query: 1154 EAVAETVLRRKIPSIPFRVLTK-WFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRT 1212
E + +L+ ++P LT W G + Y + R +LN+ I+ ++
Sbjct: 822 ENMVHLLLKIRLPKYSCSHLTSLWSNFKTGNELKTFLNYYLTRVRLNIGILKKISFTLNV 881
Query: 1213 SELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVME 1272
E AR+ GIDF SV +RGSQY+VES L+R+ ++NY+ +SP V Q +EC+PLVME
Sbjct: 882 MEEARLIGIDFQSVYNRGSQYKVESFLIRICKSENYILLSPSKVAVQKQKPLECVPLVME 941
Query: 1273 PESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI--LPSKENTLGVSSFRPDLHVLR 1330
PES FY P++VLDFQSLYPS+M YN C+ T +G++ L + TLGV++F +L+
Sbjct: 942 PESAFYKSPLLVLDFQSLYPSIMSGYNYCYSTMMGRVRELDGTKRTLGVTNFELKSELLK 1001
Query: 1331 DLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNAR 1390
L+D++ I PNGV+Y +RK L ++L EIL R M+K+ I L Q L ++ ++
Sbjct: 1002 KLRDDIRIAPNGVIYAKEHLRKSTLSKMLSEILEIRFMIKKTISDLGSDHQALKKLLESK 1061
Query: 1391 QLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYG 1450
QLALKL+ANVTYGYT+A FSGRMPC++LADSIVQ GR TLEKA+ + W AKV+YG
Sbjct: 1062 QLALKLLANVTYGYTSASFSGRMPCSDLADSIVQTGRETLEKAVKMIESTASWGAKVVYG 1121
Query: 1451 DTDRYTVCI 1459
DTD V +
Sbjct: 1122 DTDSLFVYL 1130
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 47/203 (23%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
F +++ + DHYMA P SSL K ++VPVIR++G G + H+H PY
Sbjct: 22 FDLQLNNYDHYMAYPTSLDRTHGSSLPLKKFHKVPVIRIFGCLRTGHQLLCHVHGIFPYF 81
Query: 71 YVPC----ADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQ--------------- 111
+V D + + ++ + L +K KGS K+
Sbjct: 82 FVKYDGKEDDTSIIINEKCAKLHQLLEQILRDKMKSKGSRNDKQDETNLNELVYIANVSV 141
Query: 112 ---------HV-----------------HECSLVRAKKGGAVFDKSLQPHESHIPFLLQF 145
HV C+++R + + + + +ES P+LL+F
Sbjct: 142 VKGVPFYGYHVGWTPFYKISLLNPSLSEQVCNIIREQ--NVLQNGQNEVYESQFPYLLKF 199
Query: 146 LVDYNLYGMGHLHLSKLKFRHPV 168
D+NL+ ++ K+ FR PV
Sbjct: 200 TADFNLFACSWINFKKVYFRAPV 222
>gi|134108036|ref|XP_777400.1| hypothetical protein CNBB2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260090|gb|EAL22753.1| hypothetical protein CNBB2010 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1973
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/543 (38%), Positives = 309/543 (56%), Gaps = 54/543 (9%)
Query: 935 SKPTPLSQIGFQDPA------SAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAF 988
+ PT S+ GF+ S+G + +++L++EV A+SRG L PDP D++ + +
Sbjct: 1098 AHPTQKSKYGFKYSQKGKVRDSSGDPQNMSILTMEVFAQSRGTLLPDPEKDAVTAIFYCY 1157
Query: 989 ENDSDHAVEI---------YVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILC 1039
N D + YV+ + + L IP V E+ L + I I+
Sbjct: 1158 SNTDDDLPDTTIYPGYHAGYVVTSALANPARLRLDDIP---FEVVEDELALINWVIDIVK 1214
Query: 1040 SFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGITDN 1098
+DPD+L GW++ S G+LA RA+ + +++ ISR IS R N
Sbjct: 1215 FWDPDVLAGWELHNSSWGYLAARASGEFAMDMMDQISRI------------ISGRTGPRN 1262
Query: 1099 MLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAE 1158
D + H+S V GR LN+WR+ R E+ L YT E V
Sbjct: 1263 -------------------DGYSAHHSSTFKVVGRHTLNIWRICRSEINLTQYTFENVVF 1303
Query: 1159 TVLRRKIPSI-PFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELAR 1217
+L ++IP P + W + P A R ++Y R + +EI++Q ++I +T+E AR
Sbjct: 1304 HLLHQRIPHYSPSSLTALWKSKYPSHA-CRVLKYFFQRTVMCMEILDQAEIITKTAEFAR 1362
Query: 1218 VFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGF 1277
VFG+DF SVL+RGSQY+VES + R+A ++++ +SP QV Q A +PL+ EPES +
Sbjct: 1363 VFGVDFASVLTRGSQYKVESFIFRIAKPESFVLVSPSKQQVGLQNAPFAVPLIAEPESKY 1422
Query: 1278 YADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-LPSKENTLGVSSFRPDLHVLRDLKDEL 1336
Y PV+VLDFQSLYPS+MIAYN+C+ TCLG++ + N G ++ + +L LKD L
Sbjct: 1423 YTHPVIVLDFQSLYPSIMIAYNICYSTCLGRVEMFKGTNKFGFTNLKVTEGLLELLKDYL 1482
Query: 1337 LIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKL 1396
+ PNG+++V P +RK +L ++L EIL TR+M+K A+K A + L + NARQL LKL
Sbjct: 1483 TVTPNGMIFVKPAIRKSLLAKMLGEILDTRVMIKHAMKG-ARGDKSLTAMHNARQLGLKL 1541
Query: 1397 IANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYT 1456
+ANVTYGYT+A +SGRMPC E+ADSIVQ GR TLEKA ++ W A+V+YGDTD
Sbjct: 1542 MANVTYGYTSATYSGRMPCIEIADSIVQTGRETLEKAQELIHSRVDWDARVVYGDTDSLF 1601
Query: 1457 VCI 1459
V +
Sbjct: 1602 VAL 1604
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 89/217 (41%), Gaps = 62/217 (28%)
Query: 13 VRIVSIDHYMAPPIPGYDICYSSLQ-------GGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
V+I I A PIP Y+ + G + VPVIR++G+T + QK C +IH
Sbjct: 32 VKITHIISDQAAPIPTLRQHYAPSRLATAIPLGNLPHSVPVIRIFGTTSSSQKICANIHL 91
Query: 66 ALPYLYVP-----------------CADIPVQL--------RQE--------------DD 86
PY +VP C V L RQ D
Sbjct: 92 CYPYFFVPYPMDSQDPLRPERVVKLCQRFAVSLNYAICLALRQNPTSAANNTNYGGGVDP 151
Query: 87 GYMHAISLALEKALKVKGS------------AGSKRQHVHECSLVRAKKGGAVFDKSLQP 134
++H +S+ L K G A R H+ +L + +K V + QP
Sbjct: 152 KHLHVVSVILVKGTPFYGYHLGFDYFLKINLANPARLHI---ALEQLRKPN-VLGREWQP 207
Query: 135 HESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDA 171
HE+H+ +LQF+ D++LYG G L L FR PVP+A
Sbjct: 208 HEAHLNHVLQFMCDFDLYGCGWLELGGGTFREPVPEA 244
>gi|405118606|gb|AFR93380.1| atrophin-1 family protein [Cryptococcus neoformans var. grubii H99]
Length = 1997
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/543 (37%), Positives = 307/543 (56%), Gaps = 54/543 (9%)
Query: 935 SKPTPLSQIGFQDPA------SAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAF 988
+ PT S GF+ S+G + +++L++EV A+SRG L PDP D++ + +
Sbjct: 1122 AHPTQKSNYGFKYSQKQKVRDSSGDPQNMSILTMEVFAQSRGSLLPDPEKDAVTAIFYCY 1181
Query: 989 ENDSDHAVEI---------YVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILC 1039
N D + YV++ + + L IP V E+ L + I +
Sbjct: 1182 SNTDDDLPDTTIYPGYHAGYVVIGALANPARLRLDDIP---FEVVEDELALINWVIDTVK 1238
Query: 1040 SFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGITDN 1098
+DPD+L GW++ S G+LA RA+ + +++ ISR
Sbjct: 1239 FWDPDVLAGWELHNSSWGYLAARASGEFAMDMMDQISRV--------------------- 1277
Query: 1099 MLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAE 1158
+ K D + H+S V GR LN+WR+ R E+ L YT E V
Sbjct: 1278 ----------ISGKTGPRNDGYSAHHSSTFKVTGRHTLNIWRICRSEINLTQYTFENVVF 1327
Query: 1159 TVLRRKIPSI-PFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELAR 1217
+L ++IP P + W + P A R ++Y R + +EI++Q ++I +T+E AR
Sbjct: 1328 HLLHQRIPHYSPASLTALWKSKSPSHA-CRVLKYFFQRTVMCMEILDQAEIITKTAEFAR 1386
Query: 1218 VFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGF 1277
VFG+DF SVL+RGSQY+VES + R+A ++++ +SP QV Q A +PL+ EPES +
Sbjct: 1387 VFGVDFASVLTRGSQYKVESFIFRIAKPESFVLVSPSKQQVGLQNAPFAVPLIAEPESKY 1446
Query: 1278 YADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-LPSKENTLGVSSFRPDLHVLRDLKDEL 1336
Y PV+VLDFQSLYPS+MIAYN+C+ TCLG++ + N G ++ + +L LKD L
Sbjct: 1447 YTHPVIVLDFQSLYPSIMIAYNICYSTCLGRVEMFKGTNKFGFTNLKVADGLLELLKDYL 1506
Query: 1337 LIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKL 1396
+ PNG+++V P +RK +L ++L EIL TR+M+K A+K + ++ L + NARQL LKL
Sbjct: 1507 TVTPNGMIFVKPAIRKSLLAKMLGEILDTRVMIKHAMKGVRDNKS-LTAMHNARQLGLKL 1565
Query: 1397 IANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYT 1456
+ANVTYGYT+A +SGRMPC E+ADSIVQ GR TLEKA ++ W A+V+YGDTD
Sbjct: 1566 MANVTYGYTSATYSGRMPCIEIADSIVQTGRETLEKAQELIHSRVDWDARVVYGDTDSLF 1625
Query: 1457 VCI 1459
V +
Sbjct: 1626 VAL 1628
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 54/218 (24%)
Query: 8 SNIFSVRIVSIDHYMAPPIPGYDICYSSLQ-------GGKVNEVPVIRVYGSTPAGQKTC 60
S V+I I A PIP Y+ + G + VPVIR++G+T + QK C
Sbjct: 27 SPFLRVKITHIISDQAAPIPTLRQHYAPSRLATAIPLGNLPHSVPVIRIFGTTSSSQKIC 86
Query: 61 LHIHRALPYLYVPCA-DIPVQLRQEDDGYM---------HAISLALEK-----ALKVKGS 105
+IH PY +VP D LR E + HAI LAL + A
Sbjct: 87 ANIHLCYPYFFVPYPMDSQDPLRPERVVKLCQRFAVSLNHAICLALRQNPTSAANNTNYG 146
Query: 106 AGSKRQHVHECSLVRAK--------------------------------KGGAVFDKSLQ 133
G +H+H S++ K + V + Q
Sbjct: 147 GGVDPKHLHVVSVILVKGTPFYGYHLGYDYFLKINLANPARLHIALEQLRKPNVLGREWQ 206
Query: 134 PHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDA 171
PHE+H+ +LQF+ D++LYG G L L FR PVP+
Sbjct: 207 PHEAHLNHVLQFMCDFDLYGCGWLELGGGTFREPVPEG 244
>gi|58264096|ref|XP_569204.1| zeta DNA polymerase [Cryptococcus neoformans var. neoformans JEC21]
gi|57223854|gb|AAW41897.1| zeta DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1940
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 301/522 (57%), Gaps = 48/522 (9%)
Query: 950 SAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI---------YV 1000
S+G + +++L++EV A+SRG L PDP D++ + + N D + YV
Sbjct: 1086 SSGDPQNMSILTMEVFAQSRGTLLPDPEKDAVTAIFYCYSNTDDDLPDTTIYPGYHAGYV 1145
Query: 1001 LLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLA 1060
+ + + L IP + E+ L + I I+ +DPD+L GW++ S G+LA
Sbjct: 1146 VTSALANPARLRLDDIP---FEIVEDELALINWVIDIVKFWDPDVLAGWELHNSSWGYLA 1202
Query: 1061 ERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE 1119
RA+ + +++ ISR IS R N D
Sbjct: 1203 ARASGEFAMDMMDQISRI------------ISGRTGPRN-------------------DG 1231
Query: 1120 WGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSI-PFRVLTKWFA 1178
+ H+S V GR LN+WR+ R E+ L YT E V +L ++IP P + W +
Sbjct: 1232 YSAHHSSTFKVVGRHTLNIWRICRSEINLTQYTFENVVFHLLHQRIPHYSPSSLTALWKS 1291
Query: 1179 SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
P A R ++Y R + +EI++Q ++I +T+E ARVFG+DF SVL+RGSQY+VES
Sbjct: 1292 KYPSHA-CRVLKYFFQRTVMCMEILDQAEIITKTAEFARVFGVDFASVLTRGSQYKVESF 1350
Query: 1239 LLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAY 1298
+ R+A ++++ +SP QV Q A +PL+ EPES +Y PV+VLDFQSLYPS+MIAY
Sbjct: 1351 IFRIAKPESFVLVSPSKQQVGLQNAPFAVPLIAEPESKYYTHPVIVLDFQSLYPSIMIAY 1410
Query: 1299 NLCFCTCLGKI-LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPR 1357
N+C+ TCLG++ + N G ++ + +L LKD L + PNG+++V P +RK +L +
Sbjct: 1411 NICYSTCLGRVEMFKGTNKFGFTNLKVTEGLLELLKDYLTVTPNGMIFVKPAIRKSLLAK 1470
Query: 1358 LLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
+L EIL TR+M+K A+K A + L + NARQL LKL+ANVTYGYT+A +SGRMPC E
Sbjct: 1471 MLGEILDTRVMIKHAMKG-ARGDKSLTAMHNARQLGLKLMANVTYGYTSATYSGRMPCIE 1529
Query: 1418 LADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
+ADSIVQ GR TLEKA ++ W A+V+YGDTD V +
Sbjct: 1530 IADSIVQTGRETLEKAQELIHSRVDWDARVVYGDTDSLFVAL 1571
Score = 76.6 bits (187), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 92/225 (40%), Gaps = 55/225 (24%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQ-------GGKVNEVPVIRVYGSTPAGQKTCLHI 63
V+I I A PIP Y+ + G + VPVIR++G+T + QK C +I
Sbjct: 30 LRVKITHIVSDQAAPIPTLRQHYAPSRLATAIPLGNLPHSVPVIRIFGTTSSSQKICANI 89
Query: 64 HRALPYLYVPC-ADIPVQLRQEDDGYM---------HAISLALEK-----ALKVKGSAGS 108
H PY +VP D LR E + HAI LAL + A G
Sbjct: 90 HLCYPYFFVPYPMDSQDPLRPERVVKLCQRFAVSLNHAICLALRQNPTSAANNTNYGGGV 149
Query: 109 KRQHVHECSLVRAK--------------------------------KGGAVFDKSLQPHE 136
+H+H S++ K + V + QPHE
Sbjct: 150 DPKHLHVVSVILVKGTPFYGYHLGFDYFLKINLANPARLHIALEQLRKPNVLGREWQPHE 209
Query: 137 SHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDAFFPRKFNYSS 181
+H+ +LQF+ D++LYG G L L FR PVP P K +++S
Sbjct: 210 AHLNHVLQFMCDFDLYGCGWLELGGGTFREPVP-GLSPAKDSFTS 253
>gi|242006490|ref|XP_002424083.1| DNA polymerase zeta catalytic subunit, putative [Pediculus humanus
corporis]
gi|212507389|gb|EEB11345.1| DNA polymerase zeta catalytic subunit, putative [Pediculus humanus
corporis]
Length = 2605
Score = 370 bits (951), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/516 (40%), Positives = 298/516 (57%), Gaps = 31/516 (6%)
Query: 944 GFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLY 1003
QD + LT+L +EV +R +LRPDP YD I + DS + ++
Sbjct: 1764 NLQDVKLNNTHQYLTMLFVEVHIRTRKNLRPDPDYDPIRALFYTVSFDSPGKDDETGVIV 1823
Query: 1004 CKSESHQRSLVG-IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER 1062
+ ++S VG + E L I+++ +DP I+ G++I+ S G++ +R
Sbjct: 1824 VNDVALEKSAVGGVGRNTTHYVPTEKDLLLKLIELVKIWDPYIIAGYEIEMNSWGYIFQR 1883
Query: 1063 AAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGR 1122
+ L +SR E+K S A D I E+E+
Sbjct: 1884 GFICELNLFTLLSRAVTENK------------------------GSWNAADKIHENEFED 1919
Query: 1123 THA--SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASG 1180
L + GRIVL++WRL+R EV L+ YT E V + + P++ + L+ ++
Sbjct: 1920 LPKCIRDLKICGRIVLDIWRLLRHEVTLSSYTFENVMYHLSHERHPNLSYENLSYYWEHP 1979
Query: 1181 PGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLL 1240
R R+ Y V R + +I+ QLD +NRTSE AR+FGI F+ VLSRGSQ+RVESM+L
Sbjct: 1980 SDRFRHLTYNYYVTRVEGINKILKQLDFVNRTSEFARLFGIQFYEVLSRGSQFRVESMML 2039
Query: 1241 RLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNL 1300
RLA NY+ +SP Q AS A LPL++EPES FY DP++VLDFQSLYPSM+IAYN
Sbjct: 2040 RLAKPLNYIPVSPSVSQRASMRAPASLPLILEPESIFYTDPLIVLDFQSLYPSMIIAYNY 2099
Query: 1301 CFCTCLGKI--LPSKEN-TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPR 1357
CF TCLG++ L +E G + + L+ L++++ I P GV +V VRKG+LP
Sbjct: 2100 CFSTCLGRVEKLGGREPFEFGCTQLQISPEELKRLENDISISPAGVAFVKGSVRKGILPT 2159
Query: 1358 LLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
+L+EIL TR++VK+++K+ +IL ++ +A+QL LKLIANVTYGYTAA FSGRMP E
Sbjct: 2160 MLQEILETRLIVKKSMKE-NKDNRILQKVLHAQQLGLKLIANVTYGYTAANFSGRMPSIE 2218
Query: 1418 LADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
+ DS+V GR TL +AI V N+KW AKV+YGDTD
Sbjct: 2219 VGDSVVSKGRETLHRAIQMVKNNKKWNAKVVYGDTD 2254
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 101/188 (53%), Gaps = 39/188 (20%)
Query: 10 IFSVRIVSIDHYMAPPIPG-YDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALP 68
+FSVR V ID Y++ P Y+ ++ G K PVIR++GSTP G K+C+H+H P
Sbjct: 1 MFSVRAVIIDSYLSKSFPELYE--KNNFDGTKHWLEPVIRIFGSTPDGVKSCVHVHGVYP 58
Query: 69 YLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRA------- 121
Y+YVP I + D ++A AL++ LK+ S SK + V++ ++V
Sbjct: 59 YIYVPY--IGGENPDRDALLLYA---ALDETLKITFSQ-SKTKFVYKVTVVSGIPFYGYH 112
Query: 122 -----------------KKG------GAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
KK GA+ + LQPHESHIP+ LQF++DYN+YGM ++
Sbjct: 113 ASHHQFFKIFLYNPFYIKKASDLLLKGAILGQKLQPHESHIPYTLQFMMDYNIYGMSFVN 172
Query: 159 LSKLKFRH 166
SK+K+R
Sbjct: 173 FSKVKYRR 180
>gi|167518151|ref|XP_001743416.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778515|gb|EDQ92130.1| predicted protein [Monosiga brevicollis MX1]
Length = 887
Score = 369 bits (946), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 213/518 (41%), Positives = 310/518 (59%), Gaps = 41/518 (7%)
Query: 953 AGEQLTLLSIEVQAESRGDLRPDPRYDSINVVAL-AFENDSDHAVE--IYVLLYCKSES- 1008
A + +T++S+E+ + S+G DPR+D I + L A+ +D+ + VL + +++
Sbjct: 46 AQQHVTVVSLELHSHSQGARESDPRHDPILALILCAWFDDTIQPLRQRKLVLWWGAADTE 105
Query: 1009 --HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
H+R G+P+ E L + + +DP++L+G+++Q S G+L ER HL
Sbjct: 106 PEHERW--GLPNFTGVRFDSEELLLRGLVDRILRWDPEVLVGYEVQMRSWGYLVERGWHL 163
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
G+ + ++SR I E+ + +P + S
Sbjct: 164 GVDVCMELSR-------------IHEQPTPEKSRLDP--------------HGYHARKTS 196
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
L V GRI+LN+WR+MR E+ L Y+ E + VL R++ + + L W+ S R R+
Sbjct: 197 ELRVPGRILLNLWRIMRHELALTSYSFENICYHVLHRRVAHVRQQQLRDWYQSASTRHRW 256
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R + Y+ RA+ +L+++ +L++I RTSE AR+FGI F VL+RGSQ+RVES+++RLAH +
Sbjct: 257 RTLHYLGVRAEGSLQLLYELNIIQRTSEFARLFGILFNEVLTRGSQFRVESIMVRLAHQR 316
Query: 1247 NYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
+ + +SP QV Q A E + L++EPES FY PVVVLDFQSLYPSMMIAYN+C+ TCL
Sbjct: 317 DQIMLSPSKVQVREQRAPEVVALILEPESVFYESPVVVLDFQSLYPSMMIAYNMCYSTCL 376
Query: 1307 GKI---LPSKENTLGVSSFR--PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEE 1361
GK+ P + GVS + P L +D + I PNG M+V +VR GVLP +L+E
Sbjct: 377 GKVSSESPGEPFKFGVSDLQLPPGLLSRLVAQDLVHICPNGTMFVKSEVRHGVLPVMLDE 436
Query: 1362 ILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADS 1421
IL TR+MVK+A+ P+ HR+ NARQL LKLIANVTYGYTAA FSGRMPC ++AD+
Sbjct: 437 ILRTRVMVKKAMGG-EPAGGAAHRLMNARQLGLKLIANVTYGYTAATFSGRMPCVDIADA 495
Query: 1422 IVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
IVQ R TL KA+ V + W AKV+YGDTD V +
Sbjct: 496 IVQQARETLTKAMKVVETHPDWHAKVVYGDTDSMFVLL 533
>gi|196017081|ref|XP_002118387.1| hypothetical protein TRIADDRAFT_34128 [Trichoplax adhaerens]
gi|190579017|gb|EDV19126.1| hypothetical protein TRIADDRAFT_34128 [Trichoplax adhaerens]
Length = 765
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 266/421 (63%), Gaps = 35/421 (8%)
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGIT 1096
+L +DPDIL+G++IQ S G+L +R+ L I L +SR P +
Sbjct: 13 VLFRWDPDILVGYEIQMLSWGYLLQRSKSLQIDLATLLSRVP---------------SVN 57
Query: 1097 DNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV-KLNMYTVEA 1155
+ E +E+++ + + + + GR+++N+WR+MR EV L YT E+
Sbjct: 58 NKFQLE-------------LENDFQANYKTDVFIVGRVIVNIWRIMRYEVVALRSYTFES 104
Query: 1156 VAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSEL 1215
V + VL R+ FR LT WF R R+R +EY + R + N ++ DMI+R+SE
Sbjct: 105 VIDHVLHRRHALHTFRSLTDWFHDD--RNRWRTIEYYIIRCRGNWRLLETFDMIDRSSEF 162
Query: 1216 ARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPES 1275
AR++GI F+SVLSRGSQ+R+ESMLLRLA NY+ +S Q A E +PLVMEPES
Sbjct: 163 ARLYGIQFYSVLSRGSQFRIESMLLRLAKPMNYIPVSVSEKQRTWMKAPEVIPLVMEPES 222
Query: 1276 GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK---ILPSKENTLGVSSFRPDLHVLRDL 1332
FY++PV+VLDFQSLYPS+MIAYN C+ TCLG+ I KE G +S + L +L+ L
Sbjct: 223 RFYSNPVLVLDFQSLYPSVMIAYNYCYTTCLGRISGIATDKEFKFGCTSHQVPLSLLKKL 282
Query: 1333 KDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
++++ I P G +YV +RKGV+PR+L+EIL TRIM+K+A+K ++ LHR+ + RQ
Sbjct: 283 RNDISIAPCGAVYVKDHIRKGVIPRMLKEILDTRIMIKRAMKDCKDNKS-LHRLLDIRQF 341
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDT 1452
LK+IANVTYGY A FSGRMP ELADSIV R TLE+AI VN KW A+V+YGDT
Sbjct: 342 GLKMIANVTYGYAGATFSGRMPLIELADSIVSKARETLERAIKIVNTTSKWNARVVYGDT 401
Query: 1453 D 1453
D
Sbjct: 402 D 402
>gi|321248956|ref|XP_003191299.1| zeta DNA polymerase [Cryptococcus gattii WM276]
gi|317457766|gb|ADV19512.1| zeta DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 1991
Score = 367 bits (943), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 213/545 (39%), Positives = 310/545 (56%), Gaps = 58/545 (10%)
Query: 935 SKPTPLSQIGFQDPA------SAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAF 988
+ PT S+ GF+ S+ + +++L++EV A+SRG L PDP D+I + +
Sbjct: 1115 AHPTQKSKYGFKYSQKRKVRDSSADPQSMSILTMEVFAQSRGTLLPDPEKDAITAIFYCY 1174
Query: 989 EN-DSD----------HAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKI 1037
N D+D HA YV++ + + L IP V E+ L + I
Sbjct: 1175 SNTDNDLPDTTIHPGYHAG--YVVVGALANPARLRLDDIP---FEVVEDELALINWVIDT 1229
Query: 1038 LCSFDPDILMGWDIQGGSLGFLAERAA-HLGIGLLNDISRTPLESKIAAGDSEISERGIT 1096
+ DPD+L GW++ S G+LA RA+ G+ +++ ISR IS R
Sbjct: 1230 VKFCDPDVLAGWELHNSSWGYLAARASGEFGMDMMDQISRV------------ISGRAGP 1277
Query: 1097 DNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAV 1156
N D + H+S V GR LN+WR+ R E+ L YT E V
Sbjct: 1278 RN-------------------DGYSAHHSSTFKVAGRHTLNIWRICRSEINLTQYTFENV 1318
Query: 1157 AETVLRRKIPSI-PFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSEL 1215
+L ++IP P + W + P + ++Y R + +EI++Q ++I +T+E
Sbjct: 1319 VFHLLHQRIPHYSPASLTALWRSKSPSHVCH-VLKYFFQRTVMCMEILDQAEIITKTAEF 1377
Query: 1216 ARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPES 1275
ARVFGIDF SVL+RGSQY+VES + R+A ++++ +SP QV Q A +PL+ EPES
Sbjct: 1378 ARVFGIDFASVLTRGSQYKVESFIFRIAKPESFVLVSPSKQQVGLQNAPFSVPLIAEPES 1437
Query: 1276 GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-LPSKENTLGVSSFRPDLHVLRDLKD 1334
+Y P++VLDFQSLYPS+MIAYN+C+ TCLG++ + N G ++ + +L LKD
Sbjct: 1438 KYYTHPIIVLDFQSLYPSIMIAYNICYSTCLGRVEMFKGTNKFGFTNLKVADGLLELLKD 1497
Query: 1335 ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLAL 1394
L + PNG+++V P VRK +L ++L EIL TR+M+K A+K A + L + NARQL L
Sbjct: 1498 YLTVTPNGMIFVKPAVRKSLLAKMLVEILDTRVMIKHAMKG-ARDDKSLTAMHNARQLGL 1556
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDR 1454
KL+ANVTYGYT+A +SGRMPC E+ADSIVQ GR TLEKA ++ W A+V+YGDTD
Sbjct: 1557 KLMANVTYGYTSATYSGRMPCIEIADSIVQTGRETLEKAQELIHSCADWDARVVYGDTDS 1616
Query: 1455 YTVCI 1459
V +
Sbjct: 1617 LFVAL 1621
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 89/220 (40%), Gaps = 54/220 (24%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQ-------GGKVNEVPVIRVYGSTPAGQK 58
P + + ++I I A PIP Y+ + G + VPVIR++G+T QK
Sbjct: 25 PSNPLLRIKITHITSDQAAPIPTLRQHYAPSRLATAIPLGNLPHSVPVIRIFGTTSFSQK 84
Query: 59 TCLHIHRALPYLYVPCA-DIPVQLRQEDDGYM---------HAISLALEK-----ALKVK 103
C ++H PY +VP D LR E + HAI LAL + A
Sbjct: 85 ICANVHLCYPYFFVPYPMDSQDPLRPERVVKLCQRFAVSLNHAICLALRQNPTSAANNTN 144
Query: 104 GSAGSKRQHVHECSLVRAK--------------------------------KGGAVFDKS 131
G +H+H S++ K + V +
Sbjct: 145 YGGGVDPKHLHVVSVILVKGTPFYGYHLGYHYFLKINLANPARLHIALEQLQKPNVLGRE 204
Query: 132 LQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDA 171
QPHE+H+ +LQF+ D++LYG G L L FR P+P+
Sbjct: 205 WQPHEAHLNHVLQFMCDFDLYGCGWLELGGGTFREPMPEG 244
>gi|393240252|gb|EJD47779.1| hypothetical protein AURDEDRAFT_144423 [Auricularia delicata
TFB-10046 SS5]
Length = 1503
Score = 365 bits (938), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 209/542 (38%), Positives = 311/542 (57%), Gaps = 57/542 (10%)
Query: 926 SQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVA 985
SQI GP + PL G +D ++++++EV A S+GD +PDP++D++ V
Sbjct: 644 SQIEGPTQKIDSQPLGPAGVRD------SSHMSVMALEVFALSQGDKQPDPQHDTVCAVF 697
Query: 986 LAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDC----------KVFVCSKEIHLFSHFI 1035
AF S E + + +++ ++ + + ++ V E+ L + I
Sbjct: 698 YAFSPSSTGTFESTSV---RRQAYTTGIIAVGNATLDPKRLREHEMEVVKSELDLLNRVI 754
Query: 1036 KILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGI 1095
++ DPDI+ GWD+Q S G+L RA + L+ R AG + R
Sbjct: 755 DLVLELDPDIVAGWDLQVASWGYLRARANTYSLDFLDMCGR--------AGPP--TGRQG 804
Query: 1096 TDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEA 1155
++N A TH S + + GR VLNVWR+MR ++ L+ Y+ E
Sbjct: 805 SENYSA---------------------THTSIIRLVGRHVLNVWRIMRVDMALSSYSFEN 843
Query: 1156 VAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSEL 1215
V+ VL+R++P P + LT+W S R + Y R L+I+++ + I + +E
Sbjct: 844 VSFHVLKRRMPHYPAKTLTEWTKSNLPLHNGRVLAYFADRTACVLDILDETETITKHAES 903
Query: 1216 ARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPES 1275
ARVFGIDFFS +SRGSQY+VES L R+ ++++ +SP +V Q A+ PL++EP +
Sbjct: 904 ARVFGIDFFSSISRGSQYKVESFLFRIGKPESFVILSPSGDEVGHQNAIYATPLILEPFA 963
Query: 1276 GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN---TLGV-SSFRPDLHVLRD 1331
+Y+ P+VVLDFQSLYPS+MIAYN C+ TCLG++ ++N LGV F +L
Sbjct: 964 AYYSSPLVVLDFQSLYPSIMIAYNYCYSTCLGRV--EQQNGHWKLGVLPEFELPPGLLGK 1021
Query: 1332 LKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQ 1391
L+D + + PNG+MY +VR G+L R+L+E+L TRIMVKQA+K + + L+R +ARQ
Sbjct: 1022 LEDHVNVAPNGIMYAKKEVRPGLLGRMLQELLDTRIMVKQAMKS-SKGDKGLYRTLDARQ 1080
Query: 1392 LALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGD 1451
L+LK I NVTYGYT+A FSGRMP E+ADSIVQ GR TL++AI + KW A V+YGD
Sbjct: 1081 LSLKFICNVTYGYTSATFSGRMPAVEIADSIVQSGRETLDQAIRTIQNTSKWGATVVYGD 1140
Query: 1452 TD 1453
TD
Sbjct: 1141 TD 1142
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
+QP S VRIV ID MA PG+ L +V +VP+IRV+G+T G C+H+
Sbjct: 3 TQPSS--VRVRIVDIDCCMA--APGF------LDNKEVRKVPIIRVFGTTDGGVPACVHL 52
Query: 64 HRALPYLYVPC-ADIPVQLRQE-----DDGYMHAISLALE------KALKVK-------- 103
H+ PY +V D + QE G HA++L ++ KA VK
Sbjct: 53 HQLYPYFFVSYPGDTDPRTVQEYLHNLRRGINHALALQMKLPPNSPKAYYVKRIILVKGV 112
Query: 104 -------GSAGSKRQHVHECSL----VRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLY 152
G + ++++ SL V A + G++ +ESH F Q + D+ LY
Sbjct: 113 DFYGFHSGYTPFLKIYLYDPSLVTRCVTALRTGSIMRTRFTIYESHHVFKDQVMCDFALY 172
Query: 153 GMGHLHLSKL 162
G L L ++
Sbjct: 173 GCNWLELGEV 182
>gi|50549261|ref|XP_502101.1| YALI0C21648p [Yarrowia lipolytica]
gi|49647968|emb|CAG82421.1| YALI0C21648p [Yarrowia lipolytica CLIB122]
Length = 1338
Score = 365 bits (936), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 217/540 (40%), Positives = 301/540 (55%), Gaps = 52/540 (9%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVV 984
+SQI+ P + K + SQ + A LT++S+EV +R L PDP D I V
Sbjct: 499 LSQIAPPTQKPKYSFPSQNTLSQRHESAA---LTVMSMEVHVNTRKGLNPDPDLDPILFV 555
Query: 985 ALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPD 1044
V++ + +++ P V E + +H K++ +FDPD
Sbjct: 556 VWHMLGGPSG-----VIINAEDCPDFTNIIEAPST---VVKTECEMITHLQKMVENFDPD 607
Query: 1045 ILMGWDIQGGSLGFLAERAAHLGIGL-LNDISRTPLESKIAAGDSEISERGITDNMLAEP 1103
IL G+++Q S G++ +R + + + SKI
Sbjct: 608 ILTGFEVQASSWGYVQDRCKTMLYPCEFGRVQHHKMSSKI-------------------- 647
Query: 1104 VVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRR 1163
D WG ASG+ V GR VLN+WR++RGEV L YT+E V VL
Sbjct: 648 --------------DTWGARKASGVKVVGRHVLNLWRMIRGEVSLLKYTLENVVFHVLHE 693
Query: 1164 KIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDF 1223
+IP LT+ G R VEY R+ NL++++ L++++RT+E ARV GIDF
Sbjct: 694 RIPFYTHDTLTE-MCVGSLSDRKLLVEYKCTRSNYNLQLLSTLEIVSRTAEQARVVGIDF 752
Query: 1224 FSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVV 1283
SV +RGSQY+VES L RL ++N++ SP QV Q A+EC+ LVMEPES Y PV+
Sbjct: 753 SSVYTRGSQYKVESFLARLTKSENFMLASPSREQVGQQNALECIALVMEPESRLYTSPVL 812
Query: 1284 VLDFQSLYPSMMIAYNLCFCTCLGKILPSKE--NTLGVSS--FRPDLHVLRDLKDELLIP 1339
VLDFQSLYPS+++A+N C+ TCLGK ++ NTLG ++P L KD++ I
Sbjct: 813 VLDFQSLYPSVILAHNYCYSTCLGKWTDFEKDGNTLGTEKLFYKPSLVKRLLTKDDVTIS 872
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIAN 1399
PNG+++V P +R +L R+L EIL TR MVK KL R+ + RQLALKL+AN
Sbjct: 873 PNGLVFVKPHIRVSLLARMLGEILETRFMVKDT-AKLDRDNVSFQRLNHNRQLALKLVAN 931
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
VTYGYT+A FSGRMPCAE+AD+IVQ GR TLEK I ++ ++KW AKV+YGDTD VC+
Sbjct: 932 VTYGYTSASFSGRMPCAEIADAIVQSGRETLEKCIDVIHGSDKWAAKVVYGDTDSLFVCL 991
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 80/196 (40%), Gaps = 46/196 (23%)
Query: 13 VRIVSIDHYMAPP-------IPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
++I ID+ MAPP +P C + ++ VPV+R++G T G +C H+H
Sbjct: 6 IQINYIDYVMAPPGPLDWSKVPETVSCECDYKD--LHRVPVLRIFGGTSDGLSSCAHVHN 63
Query: 66 ALPYLYVP--------------CAD----IPVQLRQ---------EDDGYMHAISLALEK 98
Y Y+P AD I +QLR E+ ++ I L K
Sbjct: 64 VFQYFYIPYTGPSLSPADSEPFIADMYRRINLQLRSKRTRGEKLPEECSFLANIVLC--K 121
Query: 99 ALKVKGSAGSKRQHV--------HECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYN 150
A G R ++ H LV + G + ESH+ ++LQF DYN
Sbjct: 122 ATPFYGYHEGWRYYLKIVVVDPSHVGMLVDMFRNGVFGWDHSRVFESHLSYILQFFCDYN 181
Query: 151 LYGMGHLHLSKLKFRH 166
L+G G + S+ R
Sbjct: 182 LHGCGWMEASRYMMRR 197
>gi|353237439|emb|CCA69412.1| probable catalytic subunit of DNA polymerase zeta UPR-1
[Piriformospora indica DSM 11827]
Length = 1531
Score = 364 bits (935), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 219/538 (40%), Positives = 289/538 (53%), Gaps = 80/538 (14%)
Query: 933 GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEV-QAESRGDLRPDPRYDSINVVALAF--- 988
GR KPT FQ L++LS+E+ A R DP I ++ F
Sbjct: 702 GRLKPTASKMSEFQS---------LSMLSLELFVATDRSAY--DPEEHEIAAISWCFYDG 750
Query: 989 ---ENDSDH--AVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDP 1043
E D D + E VL S + L D K VC E L + I + S DP
Sbjct: 751 GVQEGDHDRRASYESGVLAARNSNFNPARLR---DLKYTVCEDEADLINSMIDEVRSLDP 807
Query: 1044 DILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEP 1103
D+L GW++Q S G+ RA G+ + + R P K + G+
Sbjct: 808 DVLCGWEVQANSWGYFMARAQSYGVDVRELLGRAP--RKRSGGNV--------------- 850
Query: 1104 VVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRR 1163
D W H S L + GR ++N WR+MR E+ LN YT+ V T
Sbjct: 851 --------------DNWSTRHTSSLKIAGRHIINTWRVMRSELNLNFYTLHNVGST---- 892
Query: 1164 KIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDF 1223
S RVL+ Y+ A + LEI+++ + +TSE ARVFGIDF
Sbjct: 893 ---SEASRVLS----------------YIADLASIVLEILDETQFVTKTSEFARVFGIDF 933
Query: 1224 FSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVV 1283
FSV+SRGSQ++VES +LR+A ++++ ISP QV Q EC+PL+MEP S FY P++
Sbjct: 934 FSVISRGSQFKVESFMLRIAKPESFVLISPSRAQVGKQNGAECMPLIMEPASAFYKSPLL 993
Query: 1284 VLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGV-SSFRPDLHVLRDLKDELLIPPN 1341
VLDFQSLYPS+M+AYN C+ TCLG+I K +N GV + L LKD L I PN
Sbjct: 994 VLDFQSLYPSVMVAYNYCYSTCLGRIKDFKGQNKFGVLDNLEIPAGTLEKLKDHLTIAPN 1053
Query: 1342 GVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVT 1401
G++YV P VRK +L ++L E+L TR+MVKQ + KLA + + L R+ +ARQL+LK I NVT
Sbjct: 1054 GMIYVKPSVRKSLLAKMLTELLDTRVMVKQGM-KLAGNNKALLRVLDARQLSLKFICNVT 1112
Query: 1402 YGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
YGYT+A FSGRMP E+ADSIVQ GR TLEKAI + KW A V+YGDTD V +
Sbjct: 1113 YGYTSASFSGRMPAVEVADSIVQSGRETLEKAIHLIESTSKWGAHVVYGDTDSLFVYL 1170
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 5 QPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
QPD +RI +IDH MA P P D + QG VPV+R++G+T G++ CLH+H
Sbjct: 12 QPD---IRIRINAIDHIMAEPGPLDDP--GNAQGIVARRVPVVRIFGTTSGGERACLHVH 66
Query: 65 RALPYLYVPCADI--PVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRA- 121
+ PY Y+ P + + HA++ A+ +L + + Q V LV+
Sbjct: 67 QVFPYFYISYEGSLNPEAVNRYISRLHHALNSAIAISLN-RNHQNALGQFVRAIVLVKGI 125
Query: 122 -----------------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLY 152
+ G+V + + E+H+ + LQF+ D+NLY
Sbjct: 126 HFYGFHVGYSPFLKIMLTIPDQISRAILILQSGSVMGRKMNVFEAHLSYPLQFMCDFNLY 185
Query: 153 GMGHLHLSKLKFRHP 167
G + L + +R P
Sbjct: 186 GCDWVDLRDVHYRTP 200
>gi|406608056|emb|CCH40490.1| DNA polymerase zeta subunit [Wickerhamomyces ciferrii]
Length = 1409
Score = 362 bits (930), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 195/510 (38%), Positives = 290/510 (56%), Gaps = 51/510 (10%)
Query: 953 AGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+T+L +EV + +R LRPDP+YD ++ + N S H +Y+L +
Sbjct: 629 GSNHMTVLIVEVHSNTRESLRPDPKYDEVSAIFWKTMNGSTHREGVYLLNVKQP------ 682
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLL 1071
+PD +V E+ +F F + FDPDI+ G+++Q GS G+L ERA A +
Sbjct: 683 ---VPDKEVTHFISELEMFESFTTFVRKFDPDIISGFEVQSGSWGYLIERARAIYEFDFV 739
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
++SR ++ GD WG TH S + V
Sbjct: 740 PELSRVHFKAHNKMGD-------------------------------HWGYTHTSSIKVC 768
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR VLN+WR +R + L YT+E VA L ++P + LTK F +
Sbjct: 769 GRQVLNIWRPLR-RLNLLKYTIENVAYHALHERLPHYSNKTLTKMFQDD----FLSLSSH 823
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ +++ +++ ++I R +E AR+ GIDF V RGSQY+VES ++R+A +N++
Sbjct: 824 YFKKLEIDGRLIDTQELITRAAEEARLIGIDFNDVYYRGSQYKVESFMVRMAKAENFMLF 883
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-- 1309
SP QV Q +EC+PLVMEP S +Y P++VLDFQSLYPS++IAYN C+ T LG++
Sbjct: 884 SPSKRQVRKQKPLECIPLVMEPISAYYKSPLIVLDFQSLYPSIVIAYNYCYSTLLGRLRN 943
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
+ N +G S + +L+ L++++ I PNG+M+ VRK +L ++LEEIL TR MV
Sbjct: 944 YSNGPNHIGTSHVKHPPGLLKLLENDINISPNGLMFAKSSVRKSLLAKMLEEILDTRFMV 1003
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K L + + +++N+RQLALKLIANVTYGYT+A FSGRMPC+++AD+IVQ GR T
Sbjct: 1004 KSTMKFL---DENMKQLYNSRQLALKLIANVTYGYTSASFSGRMPCSDIADAIVQTGRET 1060
Query: 1430 LEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
L+KA+ + W AKV+YGDTD V +
Sbjct: 1061 LDKAVDIIEGQSSWGAKVVYGDTDSLFVYL 1090
Score = 73.9 bits (180), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 11 FSVRIVSIDHY-MAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
F ++I + DHY + P I D + Q + VPV+RV+GS P G HIH A PY
Sbjct: 22 FKIQINTYDHYQVTPSIFDRDGPINKEQEFSFHHVPVVRVFGSIPTGHNIIAHIHGAYPY 81
Query: 70 LYVPC-------------ADIPVQL-RQEDDG------------YMHAISLALEKALKVK 103
+Y+P A I L R++ D + + ++L K +
Sbjct: 82 IYIPYDNQDCFRLQQVLEAAIASSLNRKKSDNENTNDNHKESKVFKYIAHISLCKGVPFY 141
Query: 104 G-SAGSKRQH-------VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMG 155
G + G K + + L + G K +E HIP++LQFL D+NL+G
Sbjct: 142 GYNVGYKAFYKIYLLNPSYSNRLAEMLRDGKATGKKYDCYEVHIPYVLQFLSDFNLFGCA 201
Query: 156 HLHLSKLKFRHPV 168
L L L R P+
Sbjct: 202 WLRLKNLYLRSPI 214
>gi|392576217|gb|EIW69348.1| hypothetical protein TREMEDRAFT_30704 [Tremella mesenterica DSM 1558]
Length = 1864
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 212/579 (36%), Positives = 315/579 (54%), Gaps = 55/579 (9%)
Query: 895 PTPDLNGVTAIMHNEGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGFQDPASAGAG 954
P P V + E I E ++SQ+ GP ++K + S
Sbjct: 988 PPPSKREVVKWYNEETVIGEERG------EMSQLEGPTQKNKWGFKFSQKKKTRDSERER 1041
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDH-----AVEIYVLLYCKSESH 1009
+ +++L++EV A SR L PDP D + + ++N+ + + Y Y +S
Sbjct: 1042 QNMSVLALEVFATSRHQLLPDPEKDPLTAIFFCYQNEDESLPDNTSFPGYYAGYAVVDSP 1101
Query: 1010 Q------RSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA 1063
Q R IP + E+ L + I ++ +DPD+L GW++ GS G+LA RA
Sbjct: 1102 QSRPERMRLDDEIPH---HLVDSELDLINWVIDLVKDWDPDVLAGWELHNGSWGYLAARA 1158
Query: 1064 AH-LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGR 1122
H + L + +SR + +D +
Sbjct: 1159 EHGFSLDLTDQLSRV-------------------------------ITGHTGPKKDFYSA 1187
Query: 1123 THASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPG 1182
T S V GR +LN+WR+ R E+ L YT E VA +L +++P LT + S
Sbjct: 1188 TQTSTFKVSGRHILNIWRICRSELNLTQYTFENVAFHLLHQRVPHYSAANLTALWKSKMP 1247
Query: 1183 RARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRL 1242
R ++Y++ R + +E+++ ++I + +E ARVFG+DF SV+ RGSQY+VES + R+
Sbjct: 1248 SHTLRVIKYLLQRVVMYMEMVDAAEIITKNAEFARVFGVDFASVMFRGSQYKVESFMFRI 1307
Query: 1243 AHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCF 1302
A ++++ +SP QV Q A +PL+ EPES FY P++VLDFQSLYPS+MIAYN+CF
Sbjct: 1308 AKPESFVLVSPSKQQVGLQNAPFAVPLIAEPESQFYTHPILVLDFQSLYPSVMIAYNICF 1367
Query: 1303 CTCLGKILPSK-ENTLGVSSFRPDLHVLRDLKDELL-IPPNGVMYVPPKVRKGVLPRLLE 1360
TCLG++ + + G + + D VL LKD L + PNG+++V P VRK +L ++L
Sbjct: 1368 STCLGRVEKFRGTDKFGFTELKVDDGVLELLKDYLTAVTPNGMIFVKPAVRKSLLSKMLG 1427
Query: 1361 EILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
EIL TR+MVKQA+K + +L ++ NARQL LKL+ANVTYGYT+A +SGRMPC E+AD
Sbjct: 1428 EILDTRVMVKQAMKGARGDKSLL-QLLNARQLGLKLMANVTYGYTSATYSGRMPCIEVAD 1486
Query: 1421 SIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
SIVQ GR TLEKA ++ N W A+V+YGDTD V +
Sbjct: 1487 SIVQTGRETLEKAQEMIHSNAAWGAQVVYGDTDSLFVAL 1525
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 97/226 (42%), Gaps = 56/226 (24%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICY-------SSLQGGKVNEVPVIRVYGST 53
M+D P S + +RI I ++PP+P Y G +++PVIR++G+T
Sbjct: 1 MSDPSP-SPVLRLRITHITSTLSPPLPSLSTTYIPPHLPTPIPPGCLPHQMPVIRIFGTT 59
Query: 54 PAGQKTCLHIHRALPYLYVPCA-DIPVQLRQEDDGYM---------HAISLALEKALKV- 102
GQK C +IH PY +VP D LR E G + HAI LAL +
Sbjct: 60 SHGQKICANIHLCYPYFFVPFPMDSVDPLRPERVGRLCSRFGVSLNHAICLALRQTPGAS 119
Query: 103 -----KGSAGSKRQHVHECSLVRAK--------------------------------KGG 125
K + G+ +H+H S++ K +
Sbjct: 120 QQASDKYAGGTDPRHLHVLSVMLVKGVPFYGYHVGWSYWLKVSLSNPGRMWVALEQLRKP 179
Query: 126 AVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDA 171
V + QPHE+H+ +LQF+ D++LYG G L L FR P+P+
Sbjct: 180 VVLGREWQPHEAHLNHVLQFMCDFDLYGCGWLELEGGTFREPLPEG 225
>gi|357617710|gb|EHJ70950.1| putative DNA polymerase zeta catalytic subunit [Danaus plexippus]
Length = 1646
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 242/661 (36%), Positives = 342/661 (51%), Gaps = 93/661 (14%)
Query: 823 LYLNDGSCLYMLRPPFSPPSVDSVHKWL-----------LHDDKGASGDMDKASVEHSSL 871
L ++G C+ L+P P V KWL + D+ M +E+S
Sbjct: 762 LLASNGHCV--LQPVKVAPLRSHVEKWLSNEKNKLKTEEIFDNNDTEIGMTVDDLENSQA 819
Query: 872 KGSDIRPVLEEMHQEADEMISTEPTPDLNGVTAI-MHNEGHIAEPNACADCLQDISQISG 930
G L E++ A + + +LN I MH +G AD DI+
Sbjct: 820 LG------LNELNSSASLESTNKEQSELNTSLQITMHPDGSFL-CFGSADSKADIN---- 868
Query: 931 PDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN 990
TP + F LT++ +EV +R DL PDP D+I V + N
Sbjct: 869 -------TPTVETDF-----------LTIMLLEVHTSTRADLYPDPAIDNIMAVFITVTN 910
Query: 991 D--SDHAV-----EIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDP 1043
+ +DH + EI+++ K+ + V V E L ++++ DP
Sbjct: 911 NCPADHYLQKNITEIFIVDDKKNSKYLNRCVF--KYNVNYAENENELLEKLVEMVKKHDP 968
Query: 1044 DILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEP 1103
DI+ G+DI+ S G++ ER+ LG+ ++ ++SR I+E+ +
Sbjct: 969 DIMCGYDIESNSWGYVLERSTALGLEMVRELSR-------------ITEKNRQKRYRQDE 1015
Query: 1104 VVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRR 1163
E GR V GRI NVWRL R E+ L+ Y+ E +L
Sbjct: 1016 NELE-------------GR-------VIGRITFNVWRLFRHELALSSYSFENCMYAILNE 1055
Query: 1164 KIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDF 1223
++P +R LT+W+ R+ VEY + + + ++++LDMINRTSELAR+FG+ +
Sbjct: 1056 RVPKYSYRKLTEWWNHESRILRWIPVEYYLTKLSGTVRMLDKLDMINRTSELARLFGLQW 1115
Query: 1224 FSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVV 1283
+ VLSRGSQ+RVES++LR A N +A+SP Q A+ A ECLPL+ EPES FY DPV+
Sbjct: 1116 WEVLSRGSQFRVESLMLRAARPLNLVALSPSVRQRAAMKAPECLPLIFEPESRFYKDPVI 1175
Query: 1284 VLDFQSLYPSMMIAYNLCFCTCLGKI--LPSKE-NTLGVSSFRPDLHVLRDLKDELLI-- 1338
VLDFQSLYPSMMIAYN CF TC+G+I + KE G + + L+ L + L+
Sbjct: 1176 VLDFQSLYPSMMIAYNYCFSTCIGRIQNINGKEPYEFGAWRLKISQNRLQTLANHNLLNW 1235
Query: 1339 PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIA 1398
P GV +V VR+GVLP LL IL+ R VK+ +K + + + + ++RQL LKLIA
Sbjct: 1236 SPIGVGFVKQSVRRGVLPSLLRRILAARQAVKKGMK--LQTDEAVKKSMHSRQLGLKLIA 1293
Query: 1399 NVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVC 1458
NVTYGYTAA FSGRMPC EL DSI+ R TLE+AIS V N +W AKVIYGDTD V
Sbjct: 1294 NVTYGYTAANFSGRMPCVELGDSILAKARETLERAISLV-RNGRWNAKVIYGDTDSMFVL 1352
Query: 1459 I 1459
+
Sbjct: 1353 V 1353
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 36/186 (19%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
FSVRIV DHY+ PIPG D+ YS +G + +VPV+RV+G +P GQK CLHIH PY
Sbjct: 20 FSVRIVVCDHYLTRPIPGIDVIYSEFRGSDIKQVPVLRVFGPSPGGQKACLHIHGVFPYF 79
Query: 71 YVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAKK------ 123
Y+PC + Q + +++ I+ +L+KAL + A S QHV++ S+V+
Sbjct: 80 YIPCPEANPQPQ-----FLYQIAASLDKALNIALKQATSANQHVYKISVVKGLPFYGYHD 134
Query: 124 ------------------------GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHL 159
GAV ++ QPHE+H+ F LQF +D+NL+GM ++ +
Sbjct: 135 KEHLFLKIFLYNPGLIKQAVELCCNGAVLGQAFQPHEAHLNFTLQFFIDFNLFGMSYIDV 194
Query: 160 SKLKFR 165
+K+R
Sbjct: 195 QTVKYR 200
>gi|195430028|ref|XP_002063059.1| GK21718 [Drosophila willistoni]
gi|194159144|gb|EDW74045.1| GK21718 [Drosophila willistoni]
Length = 2028
Score = 360 bits (925), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 217/523 (41%), Positives = 300/523 (57%), Gaps = 56/523 (10%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
LT+L++EV SRGDL+PDP +D I + A E H++ S+ +V
Sbjct: 1191 LTILTLEVFVVSRGDLQPDPLHDEIRCLFYAIE----HSLPQTEAQSLPSKCCGYIMVDS 1246
Query: 1017 P--------------DCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER 1062
P D +V V + E+ F + + +DPDI G++I+ S G++ +R
Sbjct: 1247 PQDIVPEGFNHGLDRDIEVQVVASEVEAFEALLALCARWDPDIYAGYEIEMSSWGYIIDR 1306
Query: 1063 AAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGR 1122
A HL + +SR P S +D + ED
Sbjct: 1307 AKHLCFNIAPMLSRVP-----------------------------SQKVRDFVDEDREQF 1337
Query: 1123 THAS-GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
T + + GRI+L+VWRLMR E+ L Y+ E V +L ++ P R L++WF S
Sbjct: 1338 TDLDVEMKLCGRILLDVWRLMRSEIALTSYSFENVMYHILHKRCPWHSSRSLSEWFTSPC 1397
Query: 1182 GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLR 1241
R+ +EY + R + L +++QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+LR
Sbjct: 1398 --TRWIVMEYYLERVRGTLTLLDQLDLVGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLR 1455
Query: 1242 LAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLC 1301
+A +N + +SP Q A A E L L+MEP+S FYADPV+VLDFQSLYPSM+I YN C
Sbjct: 1456 IAKPKNLVPLSPSVQQRAHMRAPEYLALIMEPQSRFYADPVIVLDFQSLYPSMIIGYNYC 1515
Query: 1302 FCTCLGKILPSKENT---LGVSSFRPDLHVLRDLKDELL--IPPNGVMYVPPKVRKGVLP 1356
F TCLG++ +T G S R +L+ L D L I P GV++V +VR+G+LP
Sbjct: 1516 FSTCLGRVEHLGHSTPFEFGASQLRVSRQLLQQLLDHNLVTISPCGVVFVKREVREGILP 1575
Query: 1357 RLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCA 1416
R+L EIL TR MVKQ++K S L RI ++RQL LKL+ANVTYGYTAA FSGRMP
Sbjct: 1576 RMLSEILDTRQMVKQSMKFYKDS-SALQRILHSRQLGLKLMANVTYGYTAANFSGRMPAV 1634
Query: 1417 ELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
E+ DS+V GR TLE+AI V NE+WK +V+YGDTD V +
Sbjct: 1635 EVGDSVVSKGRETLERAIKMVESNEEWKVRVVYGDTDSMFVQV 1677
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 103/197 (52%), Gaps = 36/197 (18%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
+S+R+V D YM PI G D CYS L+G ++ +VP++R++G GQKTC+HIH PY
Sbjct: 16 YSIRLVIADFYMEKPIFGLDPCYSELRGKEIKKVPIVRIFGGNSLGQKTCMHIHGVFPYF 75
Query: 71 YVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA-------- 121
Y+P + G + I+++L+KA+ + G S QHV + LV+
Sbjct: 76 YIPYDK--RDFESLERGILQ-IAMSLDKAINISLGQGSSMAQHVFKIQLVKGIPFYGYHR 132
Query: 122 ----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH- 158
+ GA+ K+ PHESH+P++LQF++DYNLYGM ++H
Sbjct: 133 REHQYLKIFMFNPRFVRRAANLLQSGAILGKNFCPHESHVPYILQFMIDYNLYGMSYVHI 192
Query: 159 -LSKLKFRHPVPDAFFP 174
L +KFR + P
Sbjct: 193 PLEVVKFRRKNEEEVIP 209
>gi|195149658|ref|XP_002015773.1| GL10839 [Drosophila persimilis]
gi|194109620|gb|EDW31663.1| GL10839 [Drosophila persimilis]
Length = 2075
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 211/520 (40%), Positives = 308/520 (59%), Gaps = 49/520 (9%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN-----DSDHAVEI----YVLLYCKSE 1007
LT++++EV +RG+L+PDP +D + + A E+ D+D ++ Y+++ +
Sbjct: 1241 LTIMTLEVFVATRGELQPDPMHDEMRCLFYAIEHSLPDADADGSLPSKACGYIMVNHAQD 1300
Query: 1008 SHQRSLV-GI-PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
L+ G+ D +V V S E+ + + +D DI G++I+ S G++ +RA H
Sbjct: 1301 LLSEGLIHGLDKDIEVQVVSNEVEAMEALLALCARWDADIYAGYEIEMASWGYVIDRAKH 1360
Query: 1066 LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
L + +SR P + +D + ED T
Sbjct: 1361 LCFNIAPLLSRVPTQK-----------------------------VRDFVDEDREQFTDL 1391
Query: 1126 S-GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRA 1184
+ + GRI+L+VWRLMR E+ L YT E V +L ++ P + LT+WFAS +
Sbjct: 1392 DVEMKLCGRILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHNPKTLTEWFASPC--S 1449
Query: 1185 RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
R+ +EY + R + L +++QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+LR+A
Sbjct: 1450 RWIVLEYYLERVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAK 1509
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
+N + +SP Q A A E L L++EP+S FYADP++VLDFQSLYPSM+IAYN CF T
Sbjct: 1510 PKNVVPLSPSVQQRAHMRAPEYLALILEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFST 1569
Query: 1305 CLGKIL---PSKENTLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLL 1359
CLG++ S G S R +L+ L D + + P GV++V +VR+G+LPR+L
Sbjct: 1570 CLGRVEHLGGSSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRML 1629
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
EIL TR+MVKQ++ KL L RI ++RQL LKL+ANVTYGYTAA FSGRMP E+
Sbjct: 1630 TEILDTRLMVKQSM-KLHKENSALQRILHSRQLGLKLMANVTYGYTAANFSGRMPAVEVG 1688
Query: 1420 DSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
DS+V GR TLE+AI V NE+WK +V+YGDTD V +
Sbjct: 1689 DSVVSKGRETLERAIKMVEANEEWKVRVVYGDTDSMFVLV 1728
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 103/198 (52%), Gaps = 36/198 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
++S+R+V D YM P G D CYS L+G ++ VP+IRV+G+ AGQKTC+H+H PY
Sbjct: 10 VYSIRLVIADFYMEKPQSGLDPCYSELRGKEIKRVPIIRVFGANSAGQKTCMHVHGVFPY 69
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
Y+P + G + I++ L+KAL + G S QHV + LV+
Sbjct: 70 FYIPYDK--KDFESLERGILQ-IAMHLDKALNISLGQGSSNAQHVFKIQLVKGIPFYGYH 126
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ K+ PHESH+P++LQF++DYNLYGM +LH
Sbjct: 127 RVDHQFLKIYMFNPRFVRRAANLLQSGAILSKNFNPHESHVPYILQFMIDYNLYGMSYLH 186
Query: 159 --LSKLKFRHPVPDAFFP 174
L +KFR D P
Sbjct: 187 VPLEVVKFRRSHEDEVVP 204
>gi|255713872|ref|XP_002553218.1| KLTH0D11682p [Lachancea thermotolerans]
gi|238934598|emb|CAR22780.1| KLTH0D11682p [Lachancea thermotolerans CBS 6340]
Length = 1500
Score = 359 bits (922), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 200/516 (38%), Positives = 297/516 (57%), Gaps = 44/516 (8%)
Query: 950 SAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS---DHAVEIY-VLLYCK 1005
++G L+ L++E+ A S+ + PDP +D + ++ + DS D + ++ Y +
Sbjct: 660 NSGDHNPLSHLTLEIFATSKANRLPDPNFDPVQLIFWKIDPDSFPIDIGISTEGIMAYHE 719
Query: 1006 SE-----SHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLA 1060
+ SH S F +E + + ++ DPDI+ G+++ S G+L
Sbjct: 720 KDDAEFISHLNSASWSTPVAFFQSEEE--MINGVADLVLLLDPDIISGFELHSSSWGYLI 777
Query: 1061 ERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEW 1120
ER LES ER + + + V K +D W
Sbjct: 778 ER----------------LESAY--------ERDLCEEIAR---VKYKTFNKR---KDVW 807
Query: 1121 GRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTK-WFAS 1179
G +H SG+H+ GR LN+WRL+R + L YT+E + VL ++P LT W +
Sbjct: 808 GFSHDSGIHIAGRHTLNIWRLLRSGLNLLKYTLENITFHVLHERLPHFSPSALTSLWESR 867
Query: 1180 GPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESML 1239
A + Y R +N+++++ IN+T E AR+ GIDF+SV+SRGSQY+VES+L
Sbjct: 868 SNITALTTLISYWKKRVNINMKLLHSQQTINQTIEQARLIGIDFYSVISRGSQYKVESVL 927
Query: 1240 LRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYN 1299
+RL +++L +SP QV Q A+EC+PLVMEPES FY P+VVLDFQSLYPS+MI YN
Sbjct: 928 MRLCKCEHFLVLSPSKTQVRDQKALECIPLVMEPESAFYKSPLVVLDFQSLYPSIMIGYN 987
Query: 1300 LCFCTCLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPR 1357
C+ T +G + SK+ +G S + +L +L+D L I PNGVMY+ VRK +L +
Sbjct: 988 YCYSTIVGTVHEYNSKKTAIGASKVKFARGLLHELEDHLTISPNGVMYLKESVRKSMLAK 1047
Query: 1358 LLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
+L +IL TR+M+K + L + + ++ N +Q+ALKL+ANVTYGYT+A FSGRMPC++
Sbjct: 1048 MLTDILHTRLMIKATMSDLKSKNETVAKLLNNKQVALKLLANVTYGYTSASFSGRMPCSD 1107
Query: 1418 LADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
+ADSIVQ GR TLEKAIS + + +W AKV+YGDTD
Sbjct: 1108 VADSIVQTGRETLEKAISLIESHSQWGAKVVYGDTD 1143
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 94/224 (41%), Gaps = 56/224 (25%)
Query: 1 MADSQPDSNIFS--------VRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGS 52
M+ P+S FS ++I S D Y P + +SL + N VPVIRVYGS
Sbjct: 1 MSSGAPESGSFSTLAEDLIHIQINSYDSYQEVPGAFDRLSGNSLPNRQFNHVPVIRVYGS 60
Query: 53 TPAGQKTCLHIHRALPYLYVPC---ADIPVQLRQEDDGYMHA-ISLALEKALKVKGSAGS 108
P+G HIH A PY+YVP Q Q +H+ + L+++ KGSA
Sbjct: 61 LPSGHNVLCHIHGAFPYIYVPYDGEKGDSAQTIQSRCTQLHSCLETKLKESYNRKGSAEE 120
Query: 109 KR--------------QHVHECSLVRA------KKGGAVF-------------------- 128
+ + V + S +RA G +VF
Sbjct: 121 EEGKEKEKKDGFPENLKFVADVSPIRAVPFYGYHVGYSVFYKISLLSSATTTKTAEFLRE 180
Query: 129 ----DKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
K Q E+HIPFLLQF DYNL+G L LSK FR P+
Sbjct: 181 GKATGKRSQVFEAHIPFLLQFSADYNLFGCSWLKLSKCFFRSPL 224
>gi|390338524|ref|XP_786092.3| PREDICTED: uncharacterized protein LOC580974 [Strongylocentrotus
purpuratus]
Length = 3741
Score = 359 bits (921), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 226/558 (40%), Positives = 304/558 (54%), Gaps = 102/558 (18%)
Query: 925 ISQISGPDGRSKPTPLSQIGF-------QDPASAGAGEQLTLLSIEVQAESRGDLRPDPR 977
SQI GP TP + GF QD + + LT +S+EV A +R D PDP
Sbjct: 2764 TSQIEGP------TPKNTYGFKVSQGNVQDAKALHVVQHLTTMSLEVHARTRRDYHPDPE 2817
Query: 978 Y-----------------------------DSINVVALAFENDSDHA-VEIYVLLYCKSE 1007
+ D A A ++ SD + + V++ S+
Sbjct: 2818 FDPIRAIFYCIHTDGPDNKAPPGNHHRGNVDDPKASADASKDVSDEGHIRVGVIMVDLSK 2877
Query: 1008 S---------------HQRSLV---GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGW 1049
QR + G+ +V +E +F F+K++ DPD+L G+
Sbjct: 2878 KGSKGDGGNVTDLNVVTQRDWMARSGVMGIEVTYVEEEKEMFEEFVKLVRRHDPDMLAGF 2937
Query: 1050 DIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESL 1109
+IQ S G+L +RAA L + L ISR P + + ES
Sbjct: 2938 EIQQLSWGYLFQRAAFLEVQLCQLISRLPDDKR------------------------ESH 2973
Query: 1110 LAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIP 1169
A + +D +G H S + V GR+VLN+WR++R EV LN+YT E VA VL +++P
Sbjct: 2974 FAAE---KDAYGADHMSEITVAGRVVLNLWRIIRHEVTLNIYTFENVAYHVLHQRLPLFT 3030
Query: 1170 FRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSR 1229
FR LT WF R+R +EY R K N++++ +LD+I RTSELAR+FGI+F+SVLSR
Sbjct: 3031 FRSLTDWFDHITACYRWRTIEYYADRVKGNIQLIKKLDLIGRTSELARLFGIEFYSVLSR 3090
Query: 1230 GSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQS 1289
GSQYRVESM+LR A NY+A+SP Q + A EC+PLVMEPES FY DPV+VLDF S
Sbjct: 3091 GSQYRVESMMLRQAKGGNYIAVSPSVQQRSRSKAPECIPLVMEPESRFYEDPVIVLDFAS 3150
Query: 1290 LYPSMMIAYNLCFCTCLGKI---LPSKENTLGVSSFRPDLHVLRDLKDELL------IPP 1340
LYPSMMIAYN CF TCLG++ E LG + L + D+LL I P
Sbjct: 3151 LYPSMMIAYNYCFSTCLGRVEHLAQGGEFVLGCRT----LSIPPKQLDQLLASGGVHIAP 3206
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
NG+ +V VR GVLPR+L++IL+TR MVK+A+K ++L R+ + RQL LKLIANV
Sbjct: 3207 NGIAFVKHSVRNGVLPRMLDQILNTRTMVKKALKDHR-GDKVLERMLDNRQLGLKLIANV 3265
Query: 1401 TYGYTAAGFSGRMPCAEL 1418
TYGYT+A FSGRMPC E+
Sbjct: 3266 TYGYTSANFSGRMPCIEI 3283
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 124/222 (55%), Gaps = 37/222 (16%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+++HY APPI D+ +S +G +V +VPVIRV+GSTP+GQKTCLH+H PY
Sbjct: 1 MFSVRIVTLNHYQAPPIEDLDVTFSEFRGSEVRQVPVIRVFGSTPSGQKTCLHVHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKV-KGSAGSKRQHVHECSLV--------- 119
+Y IP Q D Y+H ++ +L+ AL+V +G S QHV + SLV
Sbjct: 61 IY-----IPYDGSQPTDRYLHQMASSLDTALQVAQGKGSSTVQHVFKISLVSGIPLYGYH 115
Query: 120 ------------------RAK---KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
RA + GAV +K QPHESH+PF LQFL+DYNLYGM L+
Sbjct: 116 KSERQFMKIYFYNPAVRRRAVELLQNGAVMNKIFQPHESHVPFNLQFLIDYNLYGMNMLN 175
Query: 159 LSKLKFRHPVPDAFFPRKFNYSSKQASADFQVIGCGSYPMHL 200
L+ +KFR P +A SS + S FQ P L
Sbjct: 176 LAAVKFRRPE-EATDSSNQKLSSPKPSTSFQATSPPGAPTPL 216
>gi|393908164|gb|EJD74935.1| DNA polymerase [Loa loa]
Length = 1248
Score = 358 bits (920), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 221/525 (42%), Positives = 303/525 (57%), Gaps = 63/525 (12%)
Query: 956 QLTLLSIEVQA-ESRGDLRPDPRYD---------SINVVALAFENDSDHAVEIYVLLYCK 1005
L ++S+E+ A SRG PDP+YD S+NV ND D +LL
Sbjct: 454 HLCVMSMEILALSSRGMPVPDPQYDQILGIFYTISMNVCVQDEINDVDG-----ILL--- 505
Query: 1006 SESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
+ L+G D FV S E+ LF F+ ++ +DPDI++G++ Q S G+L ER+
Sbjct: 506 --NMDNGLIGQNDLYTFV-SSEVDLFDAFVNVVRRYDPDIVIGYNTQRYSWGYLTERSLI 562
Query: 1066 LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
+G LL++ISR P+E I+D L K + E T
Sbjct: 563 IGRNLLSEISRVPVE--------------ISD-------YYRPGLQKKSRWVKELDPTPR 601
Query: 1126 SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
GRI++NVWR++R E+ L YT+ V VL+R+ P F+ L W SG
Sbjct: 602 ------GRILINVWRILRHEIALRNYTLSNVVNNVLKRRFPHYSFQTLLDWILSGERDLI 655
Query: 1186 YRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHT 1245
++++ +LNL I+ +LD +TSE+AR++GI F VL+RGSQ+RVESMLLRLA
Sbjct: 656 ILVLKHMKLYCQLNLSILLRLDFFTKTSEMARLYGIQFNEVLTRGSQFRVESMLLRLARQ 715
Query: 1246 QNYLA--ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFC 1303
+ Y+A ISP P E LPL MEPESGFY DPV+VLDFQSLYPS++IAYN CF
Sbjct: 716 EKYVAPSISPAQRGAMCSP--ETLPLTMEPESGFYRDPVIVLDFQSLYPSIIIAYNYCFT 773
Query: 1304 TCLGKI-------LPSKENTLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGV 1354
TCLGKI P++ G + + + + ++L + P G ++ VR+G+
Sbjct: 774 TCLGKISHVENICSPNRLIEFGGLQYNCPIDDIVSMLTANKLHVSPTGAIFCQRTVRRGL 833
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMP 1414
+P +LEEIL+TR+MVK+A K+ ++ L RI ARQ+ALKLIANVTYGY AA FSGRMP
Sbjct: 834 MPVMLEEILNTRVMVKKAAKECKKDRR-LARILEARQMALKLIANVTYGYAAANFSGRMP 892
Query: 1415 CAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDR-YTVC 1458
C E+AD+IV GR TLE+A+ VNE ++VIYGDTD + VC
Sbjct: 893 CVEVADAIVGKGRETLERAMRLVNEGSYGSSRVIYGDTDSMFVVC 937
>gi|198456440|ref|XP_001360325.2| GA15135 [Drosophila pseudoobscura pseudoobscura]
gi|198135615|gb|EAL24900.2| GA15135 [Drosophila pseudoobscura pseudoobscura]
Length = 2075
Score = 358 bits (920), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 211/520 (40%), Positives = 307/520 (59%), Gaps = 49/520 (9%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN-----DSDHAVEI----YVLLYCKSE 1007
LT++++EV +RG+L+PDP +D + + A E+ D+D ++ Y+++ +
Sbjct: 1241 LTIMTLEVFVATRGELQPDPMHDEMRCLFYAIEHSLPDADADGSLPSKACGYIMVNHAQD 1300
Query: 1008 SHQRSLV-GI-PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
L+ G+ D +V V S E + + +D DI G++I+ S G++ +RA H
Sbjct: 1301 LLSEGLIHGLDKDIEVQVVSNEAEAMEALLALCARWDADIYAGYEIEMASWGYVIDRAKH 1360
Query: 1066 LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
L + +SR P + +D + ED T
Sbjct: 1361 LCFNIAPLLSRVPTQK-----------------------------VRDFVDEDREQFTDL 1391
Query: 1126 S-GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRA 1184
+ + GRI+L+VWRLMR E+ L YT E V +L ++ P + LT+WFAS +
Sbjct: 1392 DVEMKLCGRILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHNPKTLTEWFASPC--S 1449
Query: 1185 RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
R+ +EY + R + L +++QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+LR+A
Sbjct: 1450 RWIVLEYYLERVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAK 1509
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
+N + +SP Q A A E L L++EP+S FYADP++VLDFQSLYPSM+IAYN CF T
Sbjct: 1510 PKNVVPLSPSVQQRAHMRAPEYLALILEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFST 1569
Query: 1305 CLGKIL---PSKENTLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLL 1359
CLG++ S G S R +L+ L D + + P GV++V +VR+G+LPR+L
Sbjct: 1570 CLGRVEHLGGSSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRML 1629
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
EIL TR+MVKQ++ KL L RI ++RQL LKL+ANVTYGYTAA FSGRMP E+
Sbjct: 1630 TEILDTRLMVKQSM-KLHKENSALQRILHSRQLGLKLMANVTYGYTAANFSGRMPAVEVG 1688
Query: 1420 DSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
DS+V GR TLE+AI V NE+WK +V+YGDTD V +
Sbjct: 1689 DSVVSKGRETLERAIKMVEANEEWKVRVVYGDTDSMFVLV 1728
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 103/198 (52%), Gaps = 36/198 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
++S+R+V D YM P G D CYS L+G ++ VP+IRV+G+ AGQKTC+H+H PY
Sbjct: 10 VYSIRLVIADFYMEKPQSGLDPCYSELRGKEIKRVPIIRVFGANSAGQKTCMHVHGVFPY 69
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
Y+P + G + I++ L+KAL + G S QHV + LV+
Sbjct: 70 FYIPYDK--KDFESLERGILQ-IAMHLDKALNISLGQGSSNAQHVFKIQLVKGIPFYGYH 126
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ K+ PHESH+P++LQF++DYNLYGM +LH
Sbjct: 127 RVDHQFLKIYMFNPRFVRRAANLLQSGAILSKNFNPHESHVPYILQFMIDYNLYGMSYLH 186
Query: 159 --LSKLKFRHPVPDAFFP 174
L +KFR D P
Sbjct: 187 VPLEVVKFRRSHEDEVVP 204
>gi|254569028|ref|XP_002491624.1| Catalytic subunit of DNA polymerase zeta, which is involved in DNA
repair and translesion synthesis [Komagataella pastoris
GS115]
gi|238031421|emb|CAY69344.1| Catalytic subunit of DNA polymerase zeta, which is involved in DNA
repair and translesion synthesis [Komagataella pastoris
GS115]
gi|328351871|emb|CCA38270.1| DNA polymerase zeta subunit [Komagataella pastoris CBS 7435]
Length = 1495
Score = 358 bits (920), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/539 (36%), Positives = 297/539 (55%), Gaps = 49/539 (9%)
Query: 938 TPLSQIGFQDPASAGAGEQ-------LTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN 990
TP S F P+ Q L L E + + P+P+ D+I + +FE+
Sbjct: 624 TPNSNNQFVYPSMHNTSHQKPSLESHLLSLCAECHISTEENKTPNPQTDAIKAIFWSFES 683
Query: 991 DS---DHAVE---IYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPD 1044
+ D ++ I+V +E R L + V V E+ + F+ ++ DPD
Sbjct: 684 QNSNIDLQIKDSGIFVWQENVTEESMRKLRLLCKQPVAVLGSELEIVQEFVSLVEYIDPD 743
Query: 1045 ILMGWDIQGGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEP 1103
I+ ++ S G++ ER H+ + L SR +
Sbjct: 744 IITAFEPNSSSWGYMIERCKHVYDLDLCEKFSRVQYKF---------------------- 781
Query: 1104 VVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRR 1163
+ +D WG TH S + GR VLN+WR + E+ L YT+E + +L
Sbjct: 782 ---------NNKTKDHWGYTHGSSFRITGRHVLNLWRALTHEITLTNYTLENLVYHILHL 832
Query: 1164 KIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDF 1223
+IP + VL++WF S + + + Y R L ++I+ Q+ ++++ +E A++ GIDF
Sbjct: 833 RIPHYNYGVLSEWFESDKPQYKSLVLNYFTQRVALEMQIITQIQIVSKVTEEAKLIGIDF 892
Query: 1224 FSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVV 1283
+SVLSRGSQ++VES+L+RL +N L ISP V Q + +PL+MEPE+ FY P+V
Sbjct: 893 YSVLSRGSQFKVESLLVRLTKQENLLMISPSKKDVFKQDPLTYVPLIMEPEAAFYKSPIV 952
Query: 1284 VLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
VLDFQSLYPS++IAYN C+ TCLG++ KE +GV+ + +L LK + + P
Sbjct: 953 VLDFQSLYPSLVIAYNYCYTTCLGRMQGYDAFKEQMIGVTKNKLPAGILEVLKHHITLSP 1012
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
NG+M+V VR+ V+ ++L ++L TRI+VK AIKKL +IL + +N+RQLALKLIANV
Sbjct: 1013 NGLMFVKSNVRRSVIGKMLIDLLDTRILVKSAIKKLGNDPRIL-QTYNSRQLALKLIANV 1071
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
TYGY +A FSGRMPCA++AD+IV R TL +AIS + N W A+V+YGDTD V +
Sbjct: 1072 TYGYASATFSGRMPCADIADAIVSSARETLNRAISLIEANTNWGARVVYGDTDSLFVYL 1130
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 125 GAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDA 171
G +F +QP ESHIP+ +QFL DYNL+ L + + +R P+ D
Sbjct: 159 GKIFGSKIQPFESHIPYTMQFLTDYNLFPCDWLKIKQWYWRSPLIDG 205
Score = 41.6 bits (96), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 13 VRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
V+I+ +D Y + P ++ + + + PV+RV+G G C+HIH PYL +
Sbjct: 5 VQIICVDSYQSDPPSQFE------EKLGLPQAPVLRVFGKLETGHTCCVHIHNVYPYLLI 58
Query: 73 PC-ADIPVQLRQEDD 86
D LR E D
Sbjct: 59 QWEGDDLENLRHEID 73
>gi|24586371|ref|NP_524881.2| mutagen-sensitive 205 [Drosophila melanogaster]
gi|11096179|gb|AAG30224.1| DNA polymerase zeta catalytic subunit [Drosophila melanogaster]
gi|21627721|gb|AAF59191.2| mutagen-sensitive 205 [Drosophila melanogaster]
Length = 2130
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 212/517 (41%), Positives = 297/517 (57%), Gaps = 45/517 (8%)
Query: 956 QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND-SDHAVEIYVLLYCKSESHQRSLV 1014
LT++++EV +RGDL+PDP +D I + A E+ D + Y + Q L
Sbjct: 1299 HLTIITLEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPDEKLPSKACGYIMVNTVQDLLS 1358
Query: 1015 GIP------DCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI 1068
P D +V V + E F + + +D DI G++I+ S G++ +RA HL
Sbjct: 1359 EGPFHGIDRDIEVQVVTSEAEAFEALLALCERWDADIYAGYEIEMSSWGYVIDRAKHLCF 1418
Query: 1069 GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS-G 1127
+ +SR P + +D + ED T
Sbjct: 1419 NIAPLLSRVPTQK-----------------------------VRDFVDEDREQFTDLDVE 1449
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ + GRI+L+VWRLMR E+ L YT E V +L ++ P + LT+WF G R+
Sbjct: 1450 MKLCGRILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTAKSLTEWF--GSPCTRWI 1507
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
+EY + R + L +++QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+LR+A +N
Sbjct: 1508 VMEYYLERVRGTLTLLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKN 1567
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
+ +SP A A E L L+MEP+S FYADP++VLDFQSLYPSM+IAYN CF TCLG
Sbjct: 1568 LVPLSPSVQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLG 1627
Query: 1308 KIL---PSKENTLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
++ S G S R +L+ L D + + P GV++V +VR+G+LPR+L EI
Sbjct: 1628 RVEHLGGSSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEI 1687
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L TR MVKQ++ KL L RI ++RQL LKL+ANVTYGYTAA FSGRMP E+ DS+
Sbjct: 1688 LDTRQMVKQSM-KLHKDSSALQRILHSRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSV 1746
Query: 1423 VQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
V GR TLE+AI V NE+WK +V+YGDTD V +
Sbjct: 1747 VSKGRETLERAIKLVENNEEWKVRVVYGDTDSMFVLV 1783
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 102/198 (51%), Gaps = 36/198 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
++SVR+V D YM P G D CYS L+G ++ VPVIRV+G GQKTC+H+H PY
Sbjct: 11 VYSVRLVIADFYMEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPY 70
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
LY+P + G + +++ L+KA+ + G S QHV + LV+
Sbjct: 71 LYIPYDK--KDFESLERGILQ-MAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYH 127
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ K+ PHESH+P++LQF++DYNLYGM ++H
Sbjct: 128 RVEHQFLKIYMFNPRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVH 187
Query: 159 --LSKLKFRHPVPDAFFP 174
L LKFR D P
Sbjct: 188 VPLEVLKFRRNHDDDVIP 205
>gi|194863706|ref|XP_001970573.1| GG23303 [Drosophila erecta]
gi|190662440|gb|EDV59632.1| GG23303 [Drosophila erecta]
Length = 1920
Score = 357 bits (916), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 212/517 (41%), Positives = 298/517 (57%), Gaps = 45/517 (8%)
Query: 956 QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND-SDHAVEIYVLLYCKSESHQRSLV 1014
LT++++EV +RGDL+PDP +D I + A E+ D + Y + Q L
Sbjct: 1089 HLTIITLEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPDENLPSKACGYIMVNTAQDLLS 1148
Query: 1015 GIP------DCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI 1068
P D +V V + E F + + +D DI G++I+ S G++ +RA HL
Sbjct: 1149 EGPFHGIDRDIEVQVVTSEAEAFEALLALCGRWDADIFAGYEIEMSSWGYVIDRAKHLCF 1208
Query: 1069 GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS-G 1127
+ +SR P + +D + ED T
Sbjct: 1209 NIAPLLSRVPTQK-----------------------------VRDFVDEDREQFTDLDVE 1239
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ + GRI+L+VWRLMR E+ L YT E V +L ++ P + LT+WFAS R+
Sbjct: 1240 MKLCGRILLDVWRLMRSEIALTSYTFENVIYHILHKRCPWHTPKSLTEWFASPC--TRWI 1297
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
+EY + R + L +++QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+LR+A +N
Sbjct: 1298 VMEYYLERVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKN 1357
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
+ +SP A A E L L+MEP+S FYADP++VLDFQSLYPSM+IAYN CF TCLG
Sbjct: 1358 LVPLSPSVQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLG 1417
Query: 1308 KIL---PSKENTLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
++ S G S R +L+ L D + + P GV++V +VR+G+LPR+L EI
Sbjct: 1418 RVEHLGGSSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEI 1477
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L TR MVKQ++ KL L RI ++RQL LKL+ANVTYGYTAA FSGRMP E+ D++
Sbjct: 1478 LDTRQMVKQSM-KLHKDSSALQRILHSRQLGLKLMANVTYGYTAANFSGRMPAVEVGDTV 1536
Query: 1423 VQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
V GR TLE+AI V NE+WK +V+YGDTD V +
Sbjct: 1537 VSKGRETLERAIKLVENNEEWKVRVVYGDTDSMFVLV 1573
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 102/198 (51%), Gaps = 36/198 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
IFSVR+V D YM P G D CYS L+G ++ VPVIRV+G GQKTC+H+H PY
Sbjct: 11 IFSVRLVIADFYMEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPY 70
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
Y+P + + G + +++ L+KA+ + G S QHV + LV+
Sbjct: 71 FYIPYDKNDFECLER--GILQ-MAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYH 127
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ K+ PHESH+P++LQF++DYNLYGM ++H
Sbjct: 128 RMEHQFLKIYMFNPRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVH 187
Query: 159 --LSKLKFRHPVPDAFFP 174
L LKFR D P
Sbjct: 188 VPLEVLKFRRSHDDEVIP 205
>gi|195027904|ref|XP_001986822.1| GH20319 [Drosophila grimshawi]
gi|193902822|gb|EDW01689.1| GH20319 [Drosophila grimshawi]
Length = 2215
Score = 357 bits (916), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 214/523 (40%), Positives = 296/523 (56%), Gaps = 54/523 (10%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND---SDHAVEIYVLLYCK-------- 1005
LT +++EV +R +L+PDP +D I + A E+ S AVE C
Sbjct: 1380 LTTMTLEVFVPTREELQPDPLHDEIRCLFYAIEHSVPTSADAVESLPSKSCGYIIVNDAQ 1439
Query: 1006 ---SESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER 1062
+E L D +V V E F + + +D DI G++I+ S G++ ER
Sbjct: 1440 DLLAEGRHHGLDA--DIQVQVVQSEAQAFEALLALCARWDADIYAGYEIEMSSWGYIIER 1497
Query: 1063 AAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGR 1122
A HL + +SR P + +D + ED
Sbjct: 1498 AKHLCFNIAPLLSRVPTQK-----------------------------VRDFVDEDREQF 1528
Query: 1123 THAS-GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
T + + GRI+L+VWRLMR E+ L YT E V +L ++ P R L+ WFAS
Sbjct: 1529 TDLDVEMKLCGRILLDVWRLMRSEIALTSYTFENVIYHILHKRCPWHSARSLSDWFASPC 1588
Query: 1182 GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLR 1241
R+ +EY + R + L +++QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+LR
Sbjct: 1589 --TRWIVLEYYLERVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLR 1646
Query: 1242 LAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLC 1301
+A +N + +SP Q A A E L L+MEPES FYADP++VLDFQSLYPSM+I YN C
Sbjct: 1647 IAKPRNLVPLSPSVQQRAHMRAPEYLALIMEPESRFYADPLIVLDFQSLYPSMIIGYNYC 1706
Query: 1302 FCTCLGKIL---PSKENTLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLP 1356
F TCLG++ S G S R +L+ L ++ + + P GV++V +VR+G+LP
Sbjct: 1707 FSTCLGRVEHLGSSGTFEFGASQLRVSRQLLQQLLERNLVTVSPCGVVFVKREVREGILP 1766
Query: 1357 RLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCA 1416
R+L EIL TR MVKQ++ KL L R+ ++RQL LKL+ANVTYGYTAA FSGRMP
Sbjct: 1767 RMLTEILDTRQMVKQSM-KLHRDNSALQRVLHSRQLGLKLMANVTYGYTAANFSGRMPAV 1825
Query: 1417 ELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
E+ DS+V GR TLE+AI V NEKWK +V+YGDTD V +
Sbjct: 1826 EVGDSVVSKGRETLERAIKLVERNEKWKVRVVYGDTDSMFVLV 1868
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 102/190 (53%), Gaps = 36/190 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
I+S+R+V +D YM P+ G D CYS L+G ++ VP++R++G+ GQK+C+H+H PY
Sbjct: 7 IYSLRLVVVDFYMEKPVFGLDPCYSELRGKEIKRVPIVRIFGANAKGQKSCMHVHGVFPY 66
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
Y+P + G + I++ L+KA+ + G S QHV + LV+
Sbjct: 67 FYIPYDK--RDFESVERGILQ-IAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYH 123
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ ++ PHESH+P++LQF++DYNLYGM +LH
Sbjct: 124 RGEHQFFKIYMFNPRFVRRAANLLQSGAILSRNFNPHESHVPYILQFMIDYNLYGMSYLH 183
Query: 159 --LSKLKFRH 166
L +KFR
Sbjct: 184 VPLEIVKFRR 193
>gi|195332241|ref|XP_002032807.1| GM20982 [Drosophila sechellia]
gi|194124777|gb|EDW46820.1| GM20982 [Drosophila sechellia]
Length = 2127
Score = 357 bits (916), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 211/516 (40%), Positives = 297/516 (57%), Gaps = 45/516 (8%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND-SDHAVEIYVLLYCKSESHQRSLVG 1015
LT++++EV +RGDL+PDP +D I + A E+ D + Y + Q L
Sbjct: 1297 LTIITLEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPDEKLPSKACGYIMVNTVQDLLSE 1356
Query: 1016 IP------DCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIG 1069
P D ++ V + E F + + +D DI G++I+ S G++ +RA HL
Sbjct: 1357 GPFHGIDRDIEMQVVASEAEAFEALLALCGRWDADIFAGYEIEMSSWGYVIDRAKHLCFN 1416
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS-GL 1128
+ +SR P + +D + ED T +
Sbjct: 1417 IAPLLSRVPTQK-----------------------------VRDFVDEDREQFTDLDVEM 1447
Query: 1129 HVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRC 1188
+ GRI+L+VWRLMR E+ L YT E V +L ++ P + LT+WF G R+
Sbjct: 1448 KLCGRILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTAKSLTEWF--GSPCTRWIV 1505
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
+EY + R + L +++QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+LR+A +N
Sbjct: 1506 MEYYLERVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNL 1565
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
+ +SP A A E L L+MEP+S FYADP++VLDFQSLYPSM+IAYN CF TCLG+
Sbjct: 1566 VPLSPSVQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGR 1625
Query: 1309 IL---PSKENTLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLLEEIL 1363
+ S G S R +L+ L D + + P GV++V +VR+G+LPR+L EIL
Sbjct: 1626 VEHLGGSSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEIL 1685
Query: 1364 STRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIV 1423
TR MVKQ++ KL L RI ++RQL LKL+ANVTYGYTAA FSGRMP E+ DS+V
Sbjct: 1686 DTRQMVKQSM-KLHKDSTALQRILHSRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSVV 1744
Query: 1424 QCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
GR TLE+AI V NE+WK +V+YGDTD V +
Sbjct: 1745 SKGRETLERAIKLVENNEEWKVRVVYGDTDSMFVLV 1780
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 102/198 (51%), Gaps = 36/198 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
++SVR+V D YM P G D CYS L+G ++ VPVIRV+G GQKTC+H+H PY
Sbjct: 11 VYSVRLVIADFYMEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPY 70
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
LY+P + G + +++ L+KA+ + G S QHV + LV+
Sbjct: 71 LYIPYDK--KDFESLERGILQ-MAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYH 127
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ K+ PHESH+P++LQF++DYNLYGM ++H
Sbjct: 128 RVEHQFLKIYMFNPRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVH 187
Query: 159 --LSKLKFRHPVPDAFFP 174
L LKFR D P
Sbjct: 188 VPLEVLKFRRSHDDDVIP 205
>gi|50305361|ref|XP_452640.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641773|emb|CAH01491.1| KLLA0C09911p [Kluyveromyces lactis]
Length = 1451
Score = 357 bits (915), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 189/510 (37%), Positives = 301/510 (59%), Gaps = 40/510 (7%)
Query: 952 GAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVAL-----AFENDSDHAVEIYVLLYCKS 1006
A ++T ++E+ +R D PDP+YD++ ++ F D D E VL++
Sbjct: 610 NASNRMTHFTMEIHVNTREDKFPDPKYDAVRMIFWKVQDGTFPFDLDITQE-GVLIFLDD 668
Query: 1007 ESHQRSL-VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
S + S P + E+ + ++ FDPDIL G++I S G+L +R H
Sbjct: 669 VSTENSWKTADPSVHITAYYDELEMIYALEDLVRFFDPDILSGYEIHSSSWGYLIDRC-H 727
Query: 1066 LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
G +E +++ D S + +D WG THA
Sbjct: 728 KG-------HDYDVEDELSRVDYNQSSKK----------------------KDRWGYTHA 758
Query: 1126 SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
+ + GR +LN+WR +R + L YT+E +A VL +++P ++ T+++ S ++
Sbjct: 759 TAFSITGRQMLNIWRPLRSSLNLLDYTLENIAFHVLHQRLPFYSYKTRTEFYESMDETSK 818
Query: 1186 YRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHT 1245
+ Y + R ++N +++ ++I +T E AR+ GIDF+SVL RGSQY+VES L+RL +
Sbjct: 819 RCLLFYWITRLRVNFKLLETQNIIGKTIEQARLIGIDFYSVLYRGSQYKVESFLIRLCKS 878
Query: 1246 QNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
+ ++ ISP QV +Q A+EC+PLVMEP S FY P++VLDFQSLYPS+++AYN C+ T
Sbjct: 879 EQFILISPSRMQVRNQKALECIPLVMEPSSAFYKSPLLVLDFQSLYPSIVMAYNYCYSTI 938
Query: 1306 LGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEIL 1363
+G++ L +K N +G++ + +L + D + I PNG+++V ++RK VL ++L++IL
Sbjct: 939 IGRVESLNTKNNEIGITRYDIPEDLLTLISDYITISPNGIVFVKKELRKSVLAKMLKDIL 998
Query: 1364 STRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIV 1423
TR ++K +K+L +++ + N RQ ALKL+ANVTYGYT+A FSGRMPC+++ADSIV
Sbjct: 999 DTRFLMKSTMKELNDEHNLINMLDN-RQEALKLLANVTYGYTSASFSGRMPCSDIADSIV 1057
Query: 1424 QCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
Q GR TLE+AI + ++W AKV+YGDTD
Sbjct: 1058 QTGRETLERAIEVIETTKEWGAKVVYGDTD 1087
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 82/202 (40%), Gaps = 36/202 (17%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
DS DSN +++I + D Y P SL G + +VPV+R YG G K +H
Sbjct: 9 DSSLDSNEINIQINNSDSYQCFPTLLDCKTSKSLPGLRFVQVPVLRFYGCLSTGHKVLIH 68
Query: 63 IHRALPYLYVP---------------CADIP-------VQLRQEDDGYMHAISLALEKAL 100
H PY+++ C + ++ + D SL +
Sbjct: 69 CHGIFPYIFIKYDGHSNDKASVIRNRCTSLHKILETRMIETFTKTDFKEKLTSLKYIANV 128
Query: 101 KVKGSAGSKRQHV-----HECSLVRAK---------KGGAVFDKSLQPHESHIPFLLQFL 146
V HV ++ +L+ + G +F + E+HIP+LLQ +
Sbjct: 129 SVVKGVPFYGYHVGYEPYYKITLLNGSYSNKLSELLRDGRIFTSKVDVFEAHIPYLLQMM 188
Query: 147 VDYNLYGMGHLHLSKLKFRHPV 168
DYNL+G G L LSK FR PV
Sbjct: 189 ADYNLFGCGWLKLSKCYFRQPV 210
>gi|195474494|ref|XP_002089526.1| GE19149 [Drosophila yakuba]
gi|194175627|gb|EDW89238.1| GE19149 [Drosophila yakuba]
Length = 2007
Score = 357 bits (915), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 212/519 (40%), Positives = 303/519 (58%), Gaps = 49/519 (9%)
Query: 956 QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN---DSDHAVEI--YVLLYCK----S 1006
LT++ +EV +RGDL+PDP +D I + A E+ D + + Y+++ S
Sbjct: 1176 HLTIIILEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPDENLPSKACGYIMVNTAQDLLS 1235
Query: 1007 ESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
E H ++ D +V V + E F + + +D DI G++I+ S G++ +RA HL
Sbjct: 1236 EGHSHAIDR--DIEVQVVTNEAEAFEALLALCGRWDADIFAGYEIEMSSWGYVIDRAKHL 1293
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
+ +SR P + +D + ED T
Sbjct: 1294 CFNIAPLLSRVPTQK-----------------------------VRDFVDEDREQFTDLD 1324
Query: 1127 -GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
+ + GRI+L+VWRLMR E+ L YT E V +L ++ P + LT+WFAS R
Sbjct: 1325 VEMKLCGRILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTPKSLTEWFASPC--TR 1382
Query: 1186 YRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHT 1245
+ +EY + R + L +++QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+LR+A
Sbjct: 1383 WLVMEYYLERVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKP 1442
Query: 1246 QNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
+N + +SP A A E L L+MEP+S FYADP++VLDFQSLYPSM+IAYN CF TC
Sbjct: 1443 KNLVPLSPSVQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTC 1502
Query: 1306 LGKILPSKENT---LGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLLE 1360
LG++ +T G S R +L+ L D + + P GV++V +VR+G+LPR+L
Sbjct: 1503 LGRVEHLGGSTPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLT 1562
Query: 1361 EILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
EIL TR MVKQ++ KL L RI ++RQL LKL+ANVTYGYTAA FSGRMP E+ D
Sbjct: 1563 EILDTRQMVKQSM-KLHKDSSALQRILHSRQLGLKLMANVTYGYTAANFSGRMPAVEVGD 1621
Query: 1421 SIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
++V GR TLE+AI V NE+WK +V+YGDTD V +
Sbjct: 1622 TVVSKGRETLERAIKLVENNEEWKVRVVYGDTDSMFVLV 1660
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 102/198 (51%), Gaps = 36/198 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
++SVR+V D YM P G D CYS L+G ++ VPVIRV+G GQKTC+H+H PY
Sbjct: 11 VYSVRLVIADFYMEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPY 70
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
Y+P + + G + I++ L+KA+ + G S QHV + LV+
Sbjct: 71 FYIPYDKRDFECLER--GILQ-IAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYH 127
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ K+ PHESH+P++LQF++DYNLYGM ++H
Sbjct: 128 RVEHQFLKIYMFNPRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVH 187
Query: 159 --LSKLKFRHPVPDAFFP 174
L LKFR D P
Sbjct: 188 VPLEVLKFRRSHEDEEIP 205
>gi|195380071|ref|XP_002048794.1| GJ21240 [Drosophila virilis]
gi|194143591|gb|EDW59987.1| GJ21240 [Drosophila virilis]
Length = 2044
Score = 356 bits (914), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 213/524 (40%), Positives = 297/524 (56%), Gaps = 55/524 (10%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI-----------YVLLY-- 1003
LT +++E+ +R +L+PDP YD I + A E+ A Y+++
Sbjct: 1207 LTTMTLELFVPTRDELQPDPLYDEIRCIFYAIEHSLPAAAGAEQQALPSKACGYIIVSDA 1266
Query: 1004 --CKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAE 1061
SE L D ++ V E F + + +D DI G++I+ S G++ E
Sbjct: 1267 QDLVSEGRHHGLDA--DIELQVVQSEAQAFEALLALCTRWDADIYAGYEIEMSSWGYIIE 1324
Query: 1062 RAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWG 1121
RA HL + +SR P + +D + ED
Sbjct: 1325 RAKHLCFNIAPLLSRVPTQK-----------------------------VRDFVDEDRES 1355
Query: 1122 RTHAS-GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASG 1180
T + + GRI+L+VWRLMR E+ L YT E V +L ++ P R LT WFAS
Sbjct: 1356 FTDLDVEMKLCGRILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHSPRALTDWFASP 1415
Query: 1181 PGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLL 1240
R+ +EY + R + L +++QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+L
Sbjct: 1416 C--TRWIVLEYYLERVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMML 1473
Query: 1241 RLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNL 1300
R+A +N + +SP Q A A E L L+MEPES FYADP++VLDFQSLYPSM+IAYN
Sbjct: 1474 RIAKPKNLVPLSPSVQQRAHMRAPEYLALIMEPESRFYADPLIVLDFQSLYPSMIIAYNY 1533
Query: 1301 CFCTCLGKIL---PSKENTLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVL 1355
CF TCLG++ S G S R +L+ L +D + I P GV++V +VR+G+L
Sbjct: 1534 CFSTCLGRVEHLGSSSPFEFGASQLRVSRPLLQQLLERDLVTISPCGVVFVKRQVREGIL 1593
Query: 1356 PRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPC 1415
PR+L EIL TR+MVKQ++ KL L R+ ++RQL LKL+ANVTYGYTAA FSGRMP
Sbjct: 1594 PRMLSEILDTRLMVKQSM-KLHRDSSALQRVLHSRQLGLKLMANVTYGYTAANFSGRMPA 1652
Query: 1416 AELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
E+ DS+V GR TLE+AI V +EKW +V+YGDTD V +
Sbjct: 1653 VEVGDSVVAKGRETLERAIKLVETHEKWNVRVVYGDTDSMFVLV 1696
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 36/198 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
I+SVR+V D YM P+ G D CYS L+G ++ VP++R++G+ GQK C+H+H PY
Sbjct: 7 IYSVRLVIADFYMEKPVFGLDPCYSELRGKEIKRVPIVRIFGANANGQKCCMHVHGVFPY 66
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
Y+P + G + I++ L+KA+ + G S QHV + LV+
Sbjct: 67 FYIPYDR--RDFESVERGILQ-IAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYH 123
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ ++ PHESH+P++LQF++DYNLYGM +LH
Sbjct: 124 RTEHQFFKIFMFNPRFVRRAANLLQSGAILSRNFNPHESHVPYILQFMIDYNLYGMSYLH 183
Query: 159 --LSKLKFRHPVPDAFFP 174
L +KFR + P
Sbjct: 184 VPLEVVKFRRHTDEEVVP 201
>gi|164662395|ref|XP_001732319.1| hypothetical protein MGL_0094 [Malassezia globosa CBS 7966]
gi|159106222|gb|EDP45105.1| hypothetical protein MGL_0094 [Malassezia globosa CBS 7966]
Length = 1491
Score = 356 bits (913), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 226/666 (33%), Positives = 332/666 (49%), Gaps = 124/666 (18%)
Query: 839 SPPSVDSVHKWLLHDDKGASGDMDKASVEHSSLKGSDIRPVLEEMHQEADEMISTEPTPD 898
+PPS V WL D GD K H L+ + +L + AD+ +S + P
Sbjct: 535 APPSQVDVQAWLTMQDTKEQGDEQK---RHYKLQARNAD-LLTGRAKRADQAVSWQHEPS 590
Query: 899 LNGVTAIMHNEGHIAEPNACADCLQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLT 958
L+ + +CA GRS P + L+
Sbjct: 591 LSDPSR-----------RSCA-------------GRSPPL--------------EKKHLS 612
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLY--------------C 1004
L +++ +RGDL PD D I+ V + +++ V+ +
Sbjct: 613 TLCMDLLVCTRGDLGPDSMRDPISAVVYTWMDEAQSDVDFKHAQHGMHHNSDADGHACDW 672
Query: 1005 KSESHQRSLVGIPDCK-------------VFVCSKEIHLFSHFIKILCSFDPDILMGWDI 1051
+ E+ S GI + + V E+ LF + + ++ +DPDIL G+D+
Sbjct: 673 QQEARHASRSGIILVRDSGLPIKLGLREPITVVDSEVALFHNLVDLVRMWDPDILAGYDV 732
Query: 1052 QGGSLGFLAERAAH---LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAES 1108
S GFL RA+ L + ++ ++ R +S + A +TD
Sbjct: 733 ARTSWGFLVRRASAVPALDMDIVYELGRMRTQSAVGA---------MTD----------- 772
Query: 1109 LLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSI 1168
W + S L + GR VLNVWRLMR + L YT+E V VL R+ P
Sbjct: 773 -----------WSASTTSSLRICGRHVLNVWRLMRTHIALTQYTLEHVVMNVLHRRTPVY 821
Query: 1169 PFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLS 1228
LT+W S R + Y + R + + ++++ +MI RT+E AR++G+DFFSVLS
Sbjct: 822 SCATLTEWLRSYRAADVARALRYALRRVRFCVALLDKTEMITRTAEFARMYGVDFFSVLS 881
Query: 1229 RGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQ 1288
RGSQ+RVES+LLR+ ++Y+ SP QVA Q A ECLPLV+EP SG Y PVVVLDFQ
Sbjct: 882 RGSQFRVESVLLRITKPRSYVLPSPNRAQVAQQNAPECLPLVLEPCSGMYRGPVVVLDFQ 941
Query: 1289 SLYPSMMIAYNLCFCTCLGKILPSKEN-TLG-------------------VSSFRPDLHV 1328
SLYP+MM+AYNLC+ TC+G++ P K + LG ++++
Sbjct: 942 SLYPTMMMAYNLCYSTCVGRVTPFKGSYKLGFTQHAELPPRTAAAPVASPATAWQQQSQE 1001
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP-SQQILHRIF 1387
+ + I PNG+ +V P +R+G+LPR+L E+LS RIM K +K+L + + R
Sbjct: 1002 QQQQDTNVYILPNGLAFVRPHIREGILPRMLHEVLSARIMTKHTLKRLPKEAGHVPQRRL 1061
Query: 1388 NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKV 1447
A+QLALKL+ANVTYGY A SGRMPC E+AD+IVQ R TLEKA++ + + +W A +
Sbjct: 1062 QAQQLALKLLANVTYGYCGATASGRMPCVEIADAIVQSARETLEKAMALIEQTPEWGADI 1121
Query: 1448 IYGDTD 1453
+YGDTD
Sbjct: 1122 VYGDTD 1127
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 44/176 (25%)
Query: 39 GKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV-----------PC-----ADIPVQLR 82
G + VPVIR YG+T GQ+ CLH+H PYLY+ C AD V L
Sbjct: 38 GCLPRVPVIRAYGATRHGQRCCLHVHNVFPYLYIEYHGSLEPTNGTCQIRGFADPDVVLD 97
Query: 83 QEDDGYMHAISLALEKALKVKGSAGSKRQHVHECS----------------------LVR 120
D+ HA+ A+ +L++ + +H C +R
Sbjct: 98 YIDE-LGHAVQTAIAASLRLSPTRKHFLAAIHLCKGTPFYGYHVRPAYYLKISYVDPAIR 156
Query: 121 AK-----KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDA 171
+ + G V + QP+E+H+ + LQ+++DYN+YG +H+ + +R V A
Sbjct: 157 HRLRALLEQGHVLNTVFQPYEAHVQYHLQWMMDYNVYGCDWMHIESVSYRSSVDKA 212
>gi|194755285|ref|XP_001959922.1| GF13111 [Drosophila ananassae]
gi|190621220|gb|EDV36744.1| GF13111 [Drosophila ananassae]
Length = 2124
Score = 356 bits (913), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 209/515 (40%), Positives = 301/515 (58%), Gaps = 44/515 (8%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI----YVLLYCKSESHQRS 1012
LT++++EV +RGDL+PDP +D I + A E+ D + Y+++ + +
Sbjct: 1295 LTIMTLEVFVCTRGDLQPDPMFDEIRCLFYAIEHSLDDDLPNKTCGYIMVNDAQDFIKEG 1354
Query: 1013 LV-GI-PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
V G+ D +V V + E F + + +D DI G++I+ S G++ +RA + +
Sbjct: 1355 FVHGLDKDIEVQVVANEAEAFEALLALCGRWDADIYAGYEIEMSSWGYVIDRAKQMCFNI 1414
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS-GLH 1129
+SR P + +D + ED T +
Sbjct: 1415 APLLSRVPTQK-----------------------------VRDFVDEDREQFTDLDVEMK 1445
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GRI+L+VWRLMR E+ L YT E V +L R+ P + L++WF+S R+ +
Sbjct: 1446 LCGRILLDVWRLMRSEIALTSYTFENVMYHILHRRCPWHSSKTLSEWFSSPC--TRWIVM 1503
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
EY + R + L +++QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+LR+A +N +
Sbjct: 1504 EYYLERVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLV 1563
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+SP Q A A E L L+MEP+S FYADP++VLDFQSLYPSM+I YN CF TCLG++
Sbjct: 1564 PLSPSVQQRAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIGYNYCFSTCLGRV 1623
Query: 1310 L---PSKENTLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLLEEILS 1364
S G S R +L+ L D + + P GV++V +VR+G+LPR+L EIL
Sbjct: 1624 EHLGGSSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILD 1683
Query: 1365 TRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
TR MVKQ++ KL L RI ++RQL LKL+ANVTYGYTAA FSGRMP E+ DS+V
Sbjct: 1684 TRQMVKQSM-KLHKDSSALQRILHSRQLGLKLMANVTYGYTAANFSGRMPAVEVGDSVVS 1742
Query: 1425 CGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
GR TLE+AI V NE+WK +V+YGDTD V +
Sbjct: 1743 KGRETLERAIKMVESNEEWKVRVVYGDTDSMFVLV 1777
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 36/198 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
++SVR+V D YM P G D CYS L+G ++ VPV+RV+G+ +GQKTC+H+H PY
Sbjct: 11 VYSVRLVIADFYMEKPQFGLDPCYSELRGKEIKRVPVVRVFGANSSGQKTCMHVHGVFPY 70
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
Y+P + G + +++ L+KA+ + G S QHV + LV+
Sbjct: 71 FYIPYDK--KDFESLERGILQ-MAIHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYH 127
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ K+ PHESH+P++LQF++DYNLYGM +LH
Sbjct: 128 RVEHQFLKIYMFNPRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYLH 187
Query: 159 --LSKLKFRHPVPDAFFP 174
+ LKFR D P
Sbjct: 188 VPMEVLKFRRSNEDDVVP 205
>gi|195120055|ref|XP_002004544.1| GI19991 [Drosophila mojavensis]
gi|193909612|gb|EDW08479.1| GI19991 [Drosophila mojavensis]
Length = 2251
Score = 355 bits (912), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 210/520 (40%), Positives = 295/520 (56%), Gaps = 51/520 (9%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCK----------- 1005
LT +++E+ +RG+L PDP +D I + A E+ + C
Sbjct: 1418 LTTMTLELFVPTRGELLPDPLHDEIRCLFYAIEHSLPEQSQSLPSKACGYIIVSDSQDIL 1477
Query: 1006 SESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
SE L D ++ V E F + + +D DI G++I+ S G++ ERA H
Sbjct: 1478 SEGRHHGLDA--DIELQVVQSEAQAFEALLALCTRWDADIYAGYEIEMSSWGYVIERAKH 1535
Query: 1066 LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
L + +SR P + +D + E+ T
Sbjct: 1536 LCFNIAPLLSRVPTQK-----------------------------VRDFVDEERESFTDL 1566
Query: 1126 S-GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRA 1184
+ + GRI+L+VWRLMR E+ L Y+ E V +L ++ P R L+ W+AS
Sbjct: 1567 DVEMKLCGRILLDVWRLMRSEIALTSYSFENVMYHILHKRCPWHSPRALSDWYASPC--T 1624
Query: 1185 RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
R+ +EY + R + L +++QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+LR+A
Sbjct: 1625 RWIVLEYYLERVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAK 1684
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
+N + +SP Q A A E L L+MEPES FYADP++VLDFQSLYPSM+IAYN CF T
Sbjct: 1685 PKNLVPLSPSVQQRAHMRAPEYLALIMEPESRFYADPLIVLDFQSLYPSMIIAYNYCFST 1744
Query: 1305 CLGKILPSKENT---LGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLL 1359
CLG++ NT G S R +L+ L +D + I P GV++V +VR+G+LPR+L
Sbjct: 1745 CLGRVEHLGSNTPFEFGASMLRVSRQLLQQLLERDLVTISPCGVVFVKREVREGILPRML 1804
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
EIL TR+MVKQ++ KL L R+ ++RQL LKL+ANVTYGYTAA FSGRMP E+
Sbjct: 1805 SEILDTRLMVKQSM-KLHRDSSALQRVLHSRQLGLKLMANVTYGYTAANFSGRMPAVEVG 1863
Query: 1420 DSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
DS+V GR TLE+AI V NEKW +V+YGDTD V +
Sbjct: 1864 DSVVSKGRETLERAIKLVETNEKWNVRVVYGDTDSMFVLV 1903
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 101/190 (53%), Gaps = 36/190 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
I+SVR+V D YM P+ G D CYS L+G ++ VP++R++G+ GQK C+H+H PY
Sbjct: 7 IYSVRLVIADFYMEKPVFGLDPCYSELRGKEIKRVPIVRIFGANANGQKCCMHVHGVFPY 66
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
Y+P + G + I++ L+KA+ + G S QHV + LV+
Sbjct: 67 FYIPYDK--RDFETVERGILQ-IAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYH 123
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +++ PHESH+P++LQF++DYNLYGM +LH
Sbjct: 124 RTEHQFFKIFMFNPRFVRRAANLLQSGAILNRNFNPHESHVPYILQFMIDYNLYGMSYLH 183
Query: 159 --LSKLKFRH 166
L +KFR
Sbjct: 184 VPLEVVKFRR 193
>gi|11096177|gb|AAG30223.1| DNA polymerase zeta catalytic subunit [Drosophila melanogaster]
Length = 2130
Score = 355 bits (912), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 211/517 (40%), Positives = 296/517 (57%), Gaps = 45/517 (8%)
Query: 956 QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND-SDHAVEIYVLLYCKSESHQRSLV 1014
LT++++EV +RGDL+PDP +D I + A E+ D + Y + Q L
Sbjct: 1299 HLTIITLEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPDEKLPSKACGYIMVNTVQDLLS 1358
Query: 1015 GIP------DCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI 1068
P D +V V + E F + + +D DI G++I+ S G++ +RA HL
Sbjct: 1359 EGPFHGIDRDIEVQVVTSEAEAFEALLALCERWDADIYAGYEIEMSSWGYVIDRAKHLCF 1418
Query: 1069 GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS-G 1127
+ +SR P + +D + ED T
Sbjct: 1419 NIAPLLSRVPTQK-----------------------------VRDFVDEDREQFTDLDVE 1449
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ + GRI+L+VWRLMR E+ L YT E V +L ++ P + LT+WF G R+
Sbjct: 1450 MKLCGRILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTAKSLTEWF--GSPCTRWI 1507
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
+EY + R + L ++ QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+LR+A +N
Sbjct: 1508 VMEYYLERVRGTLTLLEQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKN 1567
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
+ +SP A A E L L+MEP+S FYADP++VLDFQSL+PSM+IAYN CF TCLG
Sbjct: 1568 LVPLSPSVQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLHPSMIIAYNYCFSTCLG 1627
Query: 1308 KIL---PSKENTLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
++ S G S R +L+ L D + + P GV++V +VR+G+LPR+L EI
Sbjct: 1628 RVEHLGGSSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEI 1687
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L TR MVKQ++ KL L RI ++RQL LKL+ANVTYGYTAA FSGRMP E+ DS+
Sbjct: 1688 LDTRQMVKQSM-KLHKDSSALQRILHSRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSV 1746
Query: 1423 VQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
V GR TLE+AI V NE+WK +V+YGDTD V +
Sbjct: 1747 VSKGRETLERAIKLVENNEEWKVRVVYGDTDSMFVLV 1783
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 102/198 (51%), Gaps = 36/198 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
++SVR+V D YM P G D CYS L+G ++ VPVIRV+G GQKTC+H+H PY
Sbjct: 11 VYSVRLVIADFYMEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPY 70
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA------- 121
LY+P + G + +++ L+KA+ + G S QHV + LV+
Sbjct: 71 LYIPYDK--KDFESLERGILQ-MAVHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYH 127
Query: 122 -----------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ K+ PHESH+P++LQF++DYNLYGM ++H
Sbjct: 128 RVEHQFLKIYMFNPRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVH 187
Query: 159 --LSKLKFRHPVPDAFFP 174
L LKFR D P
Sbjct: 188 VPLEVLKFRRNHDDDVIP 205
>gi|16198207|gb|AAL13918.1| LD40801p [Drosophila melanogaster]
Length = 1325
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 212/517 (41%), Positives = 297/517 (57%), Gaps = 45/517 (8%)
Query: 956 QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND-SDHAVEIYVLLYCKSESHQRSLV 1014
LT++++EV +RGDL+PDP +D I + A E+ D + Y + Q L
Sbjct: 494 HLTIITLEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPDEKLPSKACGYIMVNTVQDLLS 553
Query: 1015 GIP------DCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI 1068
P D +V V + E F + + +D DI G++I+ S G++ +RA HL
Sbjct: 554 EGPFHGIDRDIEVQVVTSEAEAFEALLALCERWDADIYAGYEIEMSSWGYVIDRAKHLCF 613
Query: 1069 GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS-G 1127
+ +SR P + +D + ED T
Sbjct: 614 NIAPLLSRVPTQK-----------------------------VRDFVDEDREQFTDLDVE 644
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ + GRI+L+VWRLMR E+ L YT E V +L ++ P + LT+WF G R+
Sbjct: 645 MKLCGRILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTAKSLTEWF--GSPCTRWI 702
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
+EY + R + L +++QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM+LR+A +N
Sbjct: 703 VMEYYLERVRGTLTLLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKN 762
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
+ +SP A A E L L+MEP+S FYADP++VLDFQSLYPSM+IAYN CF TCLG
Sbjct: 763 LVPLSPSVQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLG 822
Query: 1308 KIL---PSKENTLGVSSFRPDLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
++ S G S R +L+ L D + + P GV++V +VR+G+LPR+L EI
Sbjct: 823 RVEHLGGSSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEI 882
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L TR MVKQ++ KL L RI ++RQL LKL+ANVTYGYTAA FSGRMP E+ DS+
Sbjct: 883 LDTRQMVKQSM-KLHKDSSALQRILHSRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSV 941
Query: 1423 VQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
V GR TLE+AI V NE+WK +V+YGDTD V +
Sbjct: 942 VSKGRETLERAIKLVENNEEWKVRVVYGDTDSMFVLV 978
>gi|302306271|ref|NP_982443.2| AAL099Cp [Ashbya gossypii ATCC 10895]
gi|299788440|gb|AAS50267.2| AAL099Cp [Ashbya gossypii ATCC 10895]
Length = 1464
Score = 353 bits (905), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 193/511 (37%), Positives = 300/511 (58%), Gaps = 40/511 (7%)
Query: 953 AGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN-DSDHAVEIYV--LLYCKSES- 1008
+G QL LS+E+ ++R ++ P+PR D I ++ + + S +E+ LL +E+
Sbjct: 623 SGPQLLHLSMEIHVDTRRNMLPNPRTDEIKMICWSIDGPQSVGTMELSTDGLLVSLNEND 682
Query: 1009 --HQRSLV-GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
++R + +V + E L + F K++ DPDIL G++ S G++ RA
Sbjct: 683 AIYKRIIEEACGKTRVAFFTSEYELITEFAKLVLIIDPDILSGYETNKSSWGYILARAE- 741
Query: 1066 LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
L ++I L S+++ D + + EW +H+
Sbjct: 742 ----LSHNIDFGLLISRLSRDDR-------------------------SGLASEWNYSHS 772
Query: 1126 SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
+G+ + GR +LNVWR MR EV L Y +E VA +L ++P L+ ++ + R
Sbjct: 773 AGIKIAGRHMLNVWRKMRTEVNLAKYNIENVAYHLLHERLPKFTHETLSGFWRTKSDRTS 832
Query: 1186 YRCV-EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
+ V Y + R + N+ ++N +I+RT E AR+ GIDF+SVLSRGSQYRVES+L RLA
Sbjct: 833 IKIVINYCLERVRCNIRLLNLKQVISRTVEQARLIGIDFYSVLSRGSQYRVESVLARLAK 892
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
++ + ISPG + Q A+EC+PL++EP+ FY PV+VLDFQSLYPS++IAYN C+ T
Sbjct: 893 AEHLMLISPGKGDLRHQRALECVPLILEPDPTFYTSPVLVLDFQSLYPSIIIAYNYCYTT 952
Query: 1305 CLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
LG+ + + EN +G+++ ++L+ L D + I PNGV YV +RK +L ++L +I
Sbjct: 953 ILGRTREMTAGENKIGITTNILKPNILQLLGDNITIAPNGVTYVKQNIRKSILAKMLSDI 1012
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L TR+++K+ I + + L + RQLALKL+ANVTYGY +A +SGRMPC+++ADSI
Sbjct: 1013 LDTRVLLKRTISDMHNGSKRLLSTLDNRQLALKLLANVTYGYASASYSGRMPCSDIADSI 1072
Query: 1423 VQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
V GR TL AI + + +KW A+V+YGDTD
Sbjct: 1073 VHTGRETLRAAIQMIEKEDKWGARVVYGDTD 1103
Score = 73.9 bits (180), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 52/217 (23%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQ 57
+ S+ + ++ ++ D Y PP P + + S G + VP+IR YG +G
Sbjct: 26 LNSSEGNEDLIQIQWSDYDCYQWPPTSLDPKHSL---SWPGKAFSTVPIIRFYGKLTSGH 82
Query: 58 KTCLHIHRALPYLYVPCADIPVQLRQEDDGYMH-----AISLALEKALKVKGSAGSKR-- 110
H+H ALPYL++ C P +LR H L + K GS +K+
Sbjct: 83 NILSHLHGALPYLFISCDAPPDELRYNSKATCHRLHVLLELALLNTSTKSHGSESAKQSD 142
Query: 111 ---------QHVHECSLVRAK------------------------------KGGAVFDKS 131
++V S+V+ + G++ +S
Sbjct: 143 STEDNIECLRYVANVSVVKGVPFYGFNVGWSVFYKISLLNPRFVTLLANKLRDGSILGRS 202
Query: 132 LQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
+ +E+HIP+LLQ D+NLYG +L+L+ FR PV
Sbjct: 203 VSVYEAHIPYLLQTSADFNLYGCAYLNLTDCYFRGPV 239
>gi|374105641|gb|AEY94552.1| FAAL099Cp [Ashbya gossypii FDAG1]
Length = 1464
Score = 353 bits (905), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 193/511 (37%), Positives = 300/511 (58%), Gaps = 40/511 (7%)
Query: 953 AGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEN-DSDHAVEIYV--LLYCKSES- 1008
+G QL LS+E+ ++R ++ P+PR D I ++ + + S +E+ LL +E+
Sbjct: 623 SGPQLLHLSMEIHVDTRRNMLPNPRTDEIKMICWSIDGPQSVGTMELSTDGLLVSLNEND 682
Query: 1009 --HQRSLV-GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
++R + +V + E L + F K++ DPDIL G++ S G++ RA
Sbjct: 683 AIYKRIIEEACGKTRVAFFTSEYELITEFAKLVLIIDPDILSGYETNKSSWGYILARAE- 741
Query: 1066 LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
L ++I L S+++ D + + EW +H+
Sbjct: 742 ----LSHNIDFGLLISRLSRDDR-------------------------SGLASEWNYSHS 772
Query: 1126 SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
+G+ + GR +LNVWR MR EV L Y +E VA +L ++P L+ ++ + R
Sbjct: 773 AGIKIAGRHMLNVWRKMRTEVNLAKYNIENVAYHLLHERLPKFTHETLSGFWRTKSDRTS 832
Query: 1186 YRCV-EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
+ V Y + R + N+ ++N +I+RT E AR+ GIDF+SVLSRGSQYRVES+L RLA
Sbjct: 833 IKIVINYCLERVRCNIRLLNLKQVISRTVEQARLIGIDFYSVLSRGSQYRVESVLARLAK 892
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
++ + ISPG + Q A+EC+PL++EP+ FY PV+VLDFQSLYPS++IAYN C+ T
Sbjct: 893 AEHLMLISPGKGDLRHQRALECVPLILEPDPTFYTSPVLVLDFQSLYPSIIIAYNYCYTT 952
Query: 1305 CLGKI--LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
LG+ + + EN +G+++ ++L+ L D + I PNGV YV +RK +L ++L +I
Sbjct: 953 ILGRTREMTAGENKIGITTNILKPNILQLLGDNITIAPNGVTYVKQNIRKSILAKMLSDI 1012
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L TR+++K+ I + + L + RQLALKL+ANVTYGY +A +SGRMPC+++ADSI
Sbjct: 1013 LDTRVLLKRTISDMHNGSKRLLSTLDNRQLALKLLANVTYGYASASYSGRMPCSDIADSI 1072
Query: 1423 VQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
V GR TL AI + + +KW A+V+YGDTD
Sbjct: 1073 VHTGRETLRAAIQMIEKEDKWGARVVYGDTD 1103
Score = 73.9 bits (180), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 52/217 (23%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQ 57
+ S+ + ++ ++ D Y PP P + + S G + VP+IR YG +G
Sbjct: 26 LNSSEGNEDLIQIQWSDYDCYQWPPTSLDPKHSL---SWPGKAFSTVPIIRFYGKLTSGH 82
Query: 58 KTCLHIHRALPYLYVPCADIPVQLRQEDDGYMH-----AISLALEKALKVKGSAGSKR-- 110
H+H ALPYL++ C P +LR H L + K GS +K+
Sbjct: 83 NILSHLHGALPYLFISCDAPPDELRYNSKATCHRLHVLLELALLNTSTKSHGSESAKQSD 142
Query: 111 ---------QHVHECSLVRAK------------------------------KGGAVFDKS 131
++V S+V+ + G++ +S
Sbjct: 143 STEDNIECLRYVANVSVVKGVPFYGFNVGWSVFYKISLLNPRFVTLLANKLRDGSILGRS 202
Query: 132 LQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
+ +E+HIP+LLQ D+NLYG +L+L+ FR PV
Sbjct: 203 VSVYEAHIPYLLQTSADFNLYGCAYLNLTDCYFRGPV 239
>gi|296423830|ref|XP_002841455.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637695|emb|CAZ85646.1| unnamed protein product [Tuber melanosporum]
Length = 1622
Score = 350 bits (899), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 203/546 (37%), Positives = 302/546 (55%), Gaps = 76/546 (13%)
Query: 926 SQISGPDGRSKPTPLSQIGFQDPASAGAG------EQLTLLSIEVQAESRGDLRPDPRYD 979
SQI GP ++K GF+ +A + + ++++S+E+ + GD P+ D
Sbjct: 770 SQIQGPTQKNK------YGFKFSQNAKSDNVQHELQHMSIMSLELHINTVGDFVPNAERD 823
Query: 980 SINVVALAF---ENDSDHAVE------IYVLLYCKSESHQRSLVGIPDCKVFVCSK--EI 1028
I + + E D V+ I L+ + L C+ + ++ E+
Sbjct: 824 QIECIFWSLKEMEEGEDGEVKEVTRIGIITLVDEHNNDPNPGLKFRRQCRAEIRTETSEL 883
Query: 1029 HLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGD 1087
+ + I + DPDIL GW++ S G+L +RA L + L +D+SR +E+
Sbjct: 884 GMINTLIDTVRVLDPDILTGWEVNSSSWGYLIKRANQLFEMNLCDDLSRVKIETH----- 938
Query: 1088 SEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVK 1147
S G N+ WG S + + GR ++N+WR M E+
Sbjct: 939 ---SRFGKESNL--------------------WGFNTGSAIRITGRHMVNIWRAMTAELN 975
Query: 1148 LNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLD 1207
L Y++E V +L ++IP FRVLT W+ SG + ++++V + +L+LEI+++ +
Sbjct: 976 LLGYSMENVVFHLLHQRIPHYSFRVLTGWYTSGSPLLFGKVIKHLVRKVQLDLEILDRQE 1035
Query: 1208 MINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECL 1267
+I RTSE AR+ GIDF SV RGSQ++VESM+ R+A ++++ +SP QV Q A+ECL
Sbjct: 1036 LITRTSEQARLLGIDFASVSGRGSQFKVESMMFRIAKPESFILVSPSKAQVGQQNALECL 1095
Query: 1268 PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLH 1327
PLVMEP S FY PVVVLDFQSLYPS+MIA+N C+ T
Sbjct: 1096 PLVMEPFSRFYTSPVVVLDFQSLYPSVMIAHNYCYST----------------------- 1132
Query: 1328 VLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIF 1387
L + ++ I PNG+MY+ +RK +L ++L EIL TR+MVK +K+ + L ++
Sbjct: 1133 FLELCEKDINIAPNGMMYIKQTIRKSLLAKMLTEILDTRVMVKNGMKR-DKHDKALQKLL 1191
Query: 1388 NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKV 1447
N+RQLALKLIANVTYGYT+A SGRMPC E+ADSIVQ GR LEKAI + ++ W A+V
Sbjct: 1192 NSRQLALKLIANVTYGYTSASHSGRMPCTEIADSIVQTGREILEKAIRLIQDDPNWDAEV 1251
Query: 1448 IYGDTD 1453
+YGDTD
Sbjct: 1252 VYGDTD 1257
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 36/190 (18%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSL-QGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
F +R+ +ID Y A P D + + + ++P++RV+G+T GQK C HIH A PY
Sbjct: 3 FRIRLNNIDSYQAYPT-SLDPTFPHIPDDERPPKIPIVRVFGATETGQKVCAHIHGAFPY 61
Query: 70 LYVPCADIPVQ-LRQEDDGYMHAISLALEKALKVKGSAGSKRQHVH-------------- 114
LYV + P + L EDD A+ L+ ++++ + H+
Sbjct: 62 LYV---EYPGKSLMPEDD---RAMGLSAGRSIRSQEKPPRFVAHISLVKGVPFYGFHVGW 115
Query: 115 -------------ECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSK 161
L R + G V + QPHE+HI ++ QF++D+NL G G + K
Sbjct: 116 KFYCKIYLFNPHMRGRLARILQSGGVLSRVFQPHEAHIQYIPQFMIDFNLNGCGFIECDK 175
Query: 162 LKFRHPVPDA 171
+ FR +PDA
Sbjct: 176 VLFRGEIPDA 185
>gi|19114980|ref|NP_594068.1| DNA polymerase zeta catalytic subunit Rev3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74625273|sp|Q9P6L6.1|DPOZ_SCHPO RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3
gi|7768485|emb|CAB90776.1| DNA polymerase zeta catalytic subunit Rev3 (predicted)
[Schizosaccharomyces pombe]
Length = 1480
Score = 350 bits (897), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 198/531 (37%), Positives = 303/531 (57%), Gaps = 43/531 (8%)
Query: 927 QISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVAL 986
+I P S+ S++ +DP S + +L++E+ S G L PDP DSI
Sbjct: 630 EIQSPQRLSR----SKVFRKDPYSC-----VRILALELFCCSHGGLTPDPTKDSIECCFW 680
Query: 987 AFENDSDHAV--EIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPD 1044
A++ D + ++ + ++ KS S+ P C V V + E+ L + I + DP
Sbjct: 681 AYQEDVNSSMIDRVGFIVVDKSASNSSFGRSFPSCTVLVVNSELELINEVIGLNRQLDPT 740
Query: 1045 ILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEP 1103
I+ G+++ S G+L ERA++ L +SR SK
Sbjct: 741 IVCGYEVHNSSWGYLIERASYRFNYDLPEQLSRLKCTSK--------------------- 779
Query: 1104 VVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRR 1163
A A E+ W T S +++ GR VLN+WR++RGEV L Y++E V + ++
Sbjct: 780 -------ANFAKKENAWKYTTTSSINIVGRHVLNIWRILRGEVNLLNYSLENVVLNIFKK 832
Query: 1164 KIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDF 1223
+ P + S + + Y++ R + LEI++ ++ + E AR+ GIDF
Sbjct: 833 QTPYYNQADKVHLWQSSRFHEKQILLNYMLNRTRYCLEILSACAIVTKIREQARIIGIDF 892
Query: 1224 FSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVV 1283
SV+SRGSQ++VES++ R+A +NY+ SP QVA Q A+E LPLVMEP+S Y +PVV
Sbjct: 893 MSVISRGSQFKVESIMFRIAKPENYIFPSPSAKQVAEQNALEALPLVMEPKSDLYNNPVV 952
Query: 1284 VLDFQSLYPSMMIAYNLCFCTCLGKI-LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNG 1342
VLDFQSLYPS++IAYNLC+ TCLG + + + + LG + +++ +K+++ I PNG
Sbjct: 953 VLDFQSLYPSIIIAYNLCYSTCLGPVKIVNGKVKLGFMFHSSNPNIVNLIKNDVYISPNG 1012
Query: 1343 VMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTY 1402
YV VRK +L ++LEE++ TR MVK+ +K ++++ N+RQLALKLIANVTY
Sbjct: 1013 YAYVKENVRKSLLAKMLEELIETRNMVKRGMKDC--DSDYVNKVLNSRQLALKLIANVTY 1070
Query: 1403 GYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
GYT+A FSGRMPC+E+AD+IV+ GR L ++ ++N + AKV+YGDTD
Sbjct: 1071 GYTSASFSGRMPCSEIADTIVETGREILSYSLEYINTLDFCHAKVVYGDTD 1121
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 34/179 (18%)
Query: 15 IVSIDHYMAPPIPGYDICYSSLQGG--KVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
I ID ++P P YD L ++ VPVIRV+G + C IH PY+YV
Sbjct: 5 IEYIDWELSPCDPAYDFVGKDLPTANEELTTVPVIRVFGLNEEAETVCCFIHNVFPYIYV 64
Query: 73 PCA--------DIPVQLRQEDDGYMHAISLA----------------LEKALKVKGSAGS 108
+ ++P L Q +A++LA L K + G +
Sbjct: 65 EYSSFAETLDLEVPDFLSQLQTSINYALALAARANPETYKPAVQSVQLVKGIPFYGYSFC 124
Query: 109 KRQHVHEC--------SLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHL 159
++ + C LV + GA+ +K +Q +ESH+P+LLQF+VD+NLYG + L
Sbjct: 125 FQKFLKICLFSPKNRDRLVDLFRQGAILNKVIQVYESHLPYLLQFMVDHNLYGCAPIDL 183
>gi|403359875|gb|EJY79597.1| DNA polymerase [Oxytricha trifallax]
Length = 1978
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 186/473 (39%), Positives = 287/473 (60%), Gaps = 42/473 (8%)
Query: 1022 FVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLES 1081
+ E++L I++ FDPDI++G + + S+G++ +RA +GI + N +SRTP+
Sbjct: 1108 LIAKNEVNLLQKVIELFREFDPDIIVGHETEAMSIGYICKRAEQIGIQMSNLLSRTPMTL 1167
Query: 1082 KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG---------- 1131
K +S +++ + ++ L V + + +A+ + G + +G
Sbjct: 1168 K-PLNESFYNQKLLKESKLHHQSVDDQMDQDEALRQQNQGSVNEKKKKMGVFYQKFGQQV 1226
Query: 1132 ---GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRC 1188
GRI++N+W ++R E+ L Y +E +L+++ P + +LT W+ G
Sbjct: 1227 KLNGRIIINLWSVLRNEINLTNYDLENSCFHILKKREPRFDYDMLTMWWQRGQFS---HV 1283
Query: 1189 VEYVVGRAKLNLE-IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
Y++ R LN+E I++ LD+INR +A+V+GID+ S+++RGSQ+RVES+L ++ +Q+
Sbjct: 1284 ANYLIKRL-LNIEAILDTLDLINRDINMAKVYGIDYESIMTRGSQFRVESLLSKITKSQD 1342
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
+L +S QV Q +E +PLV+EP+ FY PV ++DFQSLYPS++IAYNLC+ TCLG
Sbjct: 1343 FLLLSASVQQVRQQNELEVIPLVIEPDKQFYTSPVDIVDFQSLYPSVIIAYNLCYSTCLG 1402
Query: 1308 KIL------PSKENTLGVSSFRPDLHVL------RDLKDE--------LLIPPNGVMYVP 1347
KI+ S + LGV + ++ +DL +E ++I PN +V
Sbjct: 1403 KIIQINPESTSNKRKLGVYNIPANIKSFFGIENDQDLTEEQEQYILDSIIIAPNLNCFVK 1462
Query: 1348 PKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAA 1407
P +R G+LPR+L EIL TRIMVK+++K P I +R+ ++RQLALKLIANVTYGYTAA
Sbjct: 1463 PHLRLGLLPRMLREILYTRIMVKKSMKLYKPGSTI-YRMLDSRQLALKLIANVTYGYTAA 1521
Query: 1408 GFSGRMPCAELADSIVQCGRSTLEKAISFVNENE-KWKAKVIYGDTDR-YTVC 1458
GFSGRMPC+E ADS+V R TLEK + VN+NE W KVIYGDTD + +C
Sbjct: 1522 GFSGRMPCSEFADSVVSISRQTLEKCMKIVNQNEDNWGTKVIYGDTDSTFILC 1574
Score = 53.9 bits (128), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 55/179 (30%)
Query: 40 KVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQL-------RQEDDGYMHAI 92
K+ +VPV+R++G T GQK CL+I P+LY + PVQ+ +E ++
Sbjct: 39 KIKKVPVLRLFGITKRGQKACLNIFDYYPFLY---CEFPVQIFNIERSTSEELQVFLSDF 95
Query: 93 SLALEKALKV----KGSAGSKR-----------QHVHECSL------------------- 118
+ LE AL + K S R Q VH C L
Sbjct: 96 AFNLEFALYLSIYQKSGLKSPRILLREFEDKNEQLVHNCELAYKYPIYGYYTEKKPFIKI 155
Query: 119 -----VRAKK------GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRH 166
+ KK G ++ ++QP+E+H+ + + F DY + G+ + + + R+
Sbjct: 156 ELYHSIHVKKCANMLYSGILYGIAMQPYEAHLSYHMHFYGDYGISGLDFIKVMDVMIRN 214
>gi|391334923|ref|XP_003741848.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Metaseiulus
occidentalis]
Length = 1420
Score = 349 bits (895), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 199/512 (38%), Positives = 292/512 (57%), Gaps = 32/512 (6%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVL--LY--CKSE-SH 1009
E LT L EV +R +L+PDP D + V D E L +Y C +
Sbjct: 583 ELLTSLCCEVHCATRENLKPDPSIDPLLAVVFVLHRDYPGEGEKLQLKVVYDGCVDQVPL 642
Query: 1010 QRSLV----GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
+RSL+ GI ++ CS E+ + +I+ +DPD+++G++ S G+L +R
Sbjct: 643 RRSLLSEIGGIASVELVKCSGELEIIKRMCEIIVKWDPDVVLGYETDTLSWGYLIDRCLA 702
Query: 1066 LGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
L + SR +E I E G++ + P V +D+ +
Sbjct: 703 LELNPKLLFSRVAIEMPI-------DEPGVSHTVEMPPGVR--------FDQDKERYFES 747
Query: 1126 SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
+ GR++LNVWR+MR E+ L Y+ E V +L R+ + + L W+ ++
Sbjct: 748 WEYRLTGRVLLNVWRMMRKEIALTNYSFENVYYHILHRREHVVSWGRLRTWYEDPLQMSK 807
Query: 1186 YRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHT 1245
C+ Y+ R ++ +L++ +T E+AR++GI F+ VLSRGSQ+RVESM+LR
Sbjct: 808 --CISYLAKRCAGCFHLIEKLELYTKTCEMARIYGIQFYEVLSRGSQFRVESMMLRSTRK 865
Query: 1246 QNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
+ Y+A SP + Q + E +PLVMEP S FY DP+V+LDFQSLYPS+MIAYN CF TC
Sbjct: 866 KGYVAFSPTVLDRSLQRSPEWIPLVMEPYSNFYTDPLVILDFQSLYPSLMIAYNYCFSTC 925
Query: 1306 LGK----ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEE 1361
GK I S G D L+ LKD+++I P+G ++V +R+G+LPRL+EE
Sbjct: 926 FGKVQDIIKGSGSIKFGCGDLAVDAEELKRLKDDIIISPSGSVFVKSHIRRGILPRLVEE 985
Query: 1362 ILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADS 1421
I++TR MVK+ +KK + + +RI +ARQL+LKLIANVTYGYT+A FSGRMP ELAD+
Sbjct: 986 IINTRFMVKKGMKK--STSKSFNRILDARQLSLKLIANVTYGYTSASFSGRMPLVELADA 1043
Query: 1422 IVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
IV G+ +LE A+ VN +W A+V+YGDTD
Sbjct: 1044 IVSKGKESLETAVKLVNTTAEWGAEVVYGDTD 1075
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 38/182 (20%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
S I+ ID Y + P P D +SS ++ +VP++RV+G +G+K C+HIHR PYL
Sbjct: 13 LSCTILIIDSYQSEPCPKLDTTFSSATKTQLKQVPILRVFGIESSGKKCCIHIHRIYPYL 72
Query: 71 YVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRA--------- 121
V P + R+ A +LEKAL R + E + +
Sbjct: 73 CVKFESSPDERRK------AAFVESLEKALNAHSKVA--RHRIVEATFFKGTNFYGYYAN 124
Query: 122 ---------------KKGGAVFDKS------LQPHESHIPFLLQFLVDYNLYGMGHLHLS 160
K+ V + S ++ E+H PF LQF++D+ L GM L +
Sbjct: 125 EEVFLKISFSDPRTLKRASEVLNSSQVLGSAIRVFEAHTPFPLQFMIDHQLQGMNSLRIG 184
Query: 161 KL 162
K
Sbjct: 185 KF 186
>gi|326481837|gb|EGE05847.1| polymerase zeta subunit [Trichophyton equinum CBS 127.97]
Length = 1651
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 203/543 (37%), Positives = 291/543 (53%), Gaps = 81/543 (14%)
Query: 932 DGRSKPTPLSQI---------GFQ------DPASAGAGEQLTLLSIEVQAESRGDLRPDP 976
D ++ P+SQI GF+ A ++++S+EV +RG L P+P
Sbjct: 781 DATARDVPVSQIDASTQHNKHGFKYSQRTKSSAVQHEANYMSVMSLEVHVNTRGTLAPNP 840
Query: 977 RYDSINVV---ALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSH 1033
D + V ++ E H V + Y S L P + E+ L +
Sbjct: 841 EEDEVACVFWSVISEEEVRHHGVVVVSETYGLSSK----LKPEPGIEFQEEISELDLMNR 896
Query: 1034 FIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLESKIAAGDSEISE 1092
+ I+ +DPDIL G+++ GS G+L ERA L ++ SR +S G
Sbjct: 897 IVGIVRYYDPDILTGYEVHNGSWGYLIERARKGYDYDLCDEFSRVKSQSHGRIGRET--- 953
Query: 1093 RGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYT 1152
D WG H S + + GR ++N+WR MRGE+ L YT
Sbjct: 954 -------------------------DRWGFNHTSTIRITGRHMINIWRAMRGELNLLQYT 988
Query: 1153 VEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRT 1212
+E VA +L ++IP PF LT+WF S R + ++Y R LNLEI++ ++I+RT
Sbjct: 989 MENVAFHLLHKRIPHYPFEDLTRWFKSDRPRDVAKTIQYFSSRVDLNLEILDANELISRT 1048
Query: 1213 SELARVFGIDF-FSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVM 1271
SE AR+ F + SR V Q A+ECLPLVM
Sbjct: 1049 SEQARILAGKFHLDIPSRA---------------------------VGQQNALECLPLVM 1081
Query: 1272 EPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLR 1330
EP+S FY P++VLDFQSLYPS+MIAYN C+ T LG+I+ + N +G++ + + +L
Sbjct: 1082 EPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNKMGITDYEREPGLLG 1141
Query: 1331 DLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNAR 1390
LKD++ I PNG++Y ++RK +L ++L EIL TR+MVK +K+ + L R+ N R
Sbjct: 1142 LLKDQINIAPNGIIYAKQEIRKSLLAKMLTEILETRVMVKNGMKE-DKDDRPLQRLLNNR 1200
Query: 1391 QLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYG 1450
QLALKLIANVTYGYT+A FSGRMPC+E+ADSIVQ R TLEKAI+ ++ ++W A+V+YG
Sbjct: 1201 QLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEKAIALIHSVKRWGAEVVYG 1260
Query: 1451 DTD 1453
DTD
Sbjct: 1261 DTD 1263
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 39/196 (19%)
Query: 11 FSVRIVSIDHYMAPPI---PGY--DICYSSLQGGKVNEVPVIRVYGSTPAGQKTCL---- 61
F V + +DHY P P + D L+ G + +VPVIRV+G+T GQK L
Sbjct: 4 FRVLLNYVDHYQVTPTELDPQFTSDNNGPQLRSGSI-KVPVIRVFGATETGQKGPLDPAE 62
Query: 62 -------HIHRALPYLYVPCA--------DIPVQLRQEDDGYMHAISLALEKALKVKGSA 106
+ +++ + V A D + L + + H+ + +L VKG
Sbjct: 63 GQEYILSYRYKSAKHRIVNAAIRSLHASIDHALALSYRRNPFDHSTAFVAYISL-VKGIP 121
Query: 107 GSKRQH-------------VHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYG 153
+H L GAV ++LQP+ESH+ F+ Q++ DY+L+G
Sbjct: 122 FYGYYVGYRYYFKVYLLNPLHMTRLADLLLQGAVMKRALQPYESHLQFIPQWMCDYSLHG 181
Query: 154 MGHLHLSKLKFRHPVP 169
++ SK+KFR PVP
Sbjct: 182 CTFINCSKVKFRPPVP 197
>gi|452823373|gb|EME30384.1| DNA polymerase zeta subunit [Galdieria sulphuraria]
Length = 1615
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 207/537 (38%), Positives = 303/537 (56%), Gaps = 39/537 (7%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSD--HAVEIY------VLLYCKSES 1008
LTL+S+EV E+R PDP D++++V + ++ H Y +LL S
Sbjct: 713 LTLMSLEVITEAREGKLPDPAIDAVHIVCMVIHDERAKLHLGPTYQDIFHVILLAEDPVS 772
Query: 1009 HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI 1068
Q + D + + S E LF + +D D++ G+DI SLG+L ER HLG
Sbjct: 773 TQYPYLISDDISIQMVSNEEELFYKVAHWIRYYDIDMIFGYDIHRSSLGYLIERGHHLGW 832
Query: 1069 GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGL 1128
ISR + + + ++ E V ++ DA D + + +
Sbjct: 833 AFTRWISRW---KETKPNINTWNNDEAVEDEEEESVNQDNCPIPDASRADTYMKRLGCHI 889
Query: 1129 HVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRC 1188
+ GR V +W ++R +VKL Y E + +L+++IP+ VL + + +
Sbjct: 890 KITGRYVFGIWNILRVQVKLPYYDYEGASAALLKKRIPAYEPWVLGSFLQKT--QHIHIA 947
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
EY + +A N + +LD +++TSELAR+FGIDF SV++RGSQ+RVESML RLAH Y
Sbjct: 948 YEYCLQKAADNFHFLEELDWVSQTSELARIFGIDFRSVITRGSQFRVESMLARLAHANGY 1007
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
L +S Q+ SQPAMECLPLVMEP + FY DPV+V+DFQSLYPS++IA+N+CF T G
Sbjct: 1008 LLLSASREQLLSQPAMECLPLVMEPVTNFYQDPVIVMDFQSLYPSIIIAHNMCFSTMFGN 1067
Query: 1309 ILPSKENT------LGV-SSFRPD--LHVLRDLK-----------DELLIPPNGVMYVPP 1348
+ + + +GV SF P L V D + ++ + PNG +V
Sbjct: 1068 VRGFSQISHFGSCRMGVLESFEPPSLLSVTNDSELSSGALYERYCNDYYVAPNGECFVTS 1127
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ-----ILHRIFNARQLALKLIANVTYG 1403
K+RKG+LPRLL+EILSTR+M+K ++K +A Q L +I NA+Q ALKLIANVTYG
Sbjct: 1128 KIRKGMLPRLLQEILSTRLMIKSSMKWIAEHYQGEYKDRLWKILNAQQFALKLIANVTYG 1187
Query: 1404 YTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN-EKWKAKVIYGDTDRYTVCI 1459
YT+A FSGRMPC+ LAD+IVQ GR +++++ + ++ +A +YGDTD V I
Sbjct: 1188 YTSAAFSGRMPCSGLADAIVQHGRQAMKRSMEEIERGWQQVRAHTVYGDTDSLFVFI 1244
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 94/199 (47%), Gaps = 41/199 (20%)
Query: 13 VRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
+R+V ID+Y D + QG ++ PVIR++GST +GQK CLHIH LPY YV
Sbjct: 12 IRLVYIDYYYD------DQGATPSQGKRIARQPVIRIFGSTLSGQKCCLHIHNVLPYFYV 65
Query: 73 PCADIPVQLRQ--EDDGYMHAISLALEKALKVKGSAGSKRQ----------------HVH 114
P R E + + LE +L S+ + ++ H H
Sbjct: 66 QLP--PKHFRNLGEAQAFTTQLVEFLEHSLSSSISSTNAQKIIAATEIVERIPFYGFHAH 123
Query: 115 ECSLVR---------AKKGGAVF-----DKSLQPHESHIPFLLQFLVDYNLYGMGHLHLS 160
C V+ K F D LQPHESHI +L QF++DYNLYGM + LS
Sbjct: 124 SCFFVKIYTFVPGNIRKLADLCFRFPARDLILQPHESHISYLSQFMIDYNLYGMNFIRLS 183
Query: 161 KLKFRHPVPDA-FFPRKFN 178
+FR P+P + FP + N
Sbjct: 184 NPRFRLPLPRSDTFPWRMN 202
>gi|449018967|dbj|BAM82369.1| DNA polymerase zeta, catalytic subunit [Cyanidioschyzon merolae
strain 10D]
Length = 1996
Score = 342 bits (878), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 219/592 (36%), Positives = 317/592 (53%), Gaps = 86/592 (14%)
Query: 923 QDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSIN 982
+D S ISG +P PL + E +L+IE + +R + RPD D +
Sbjct: 1055 RDSSGISG-----EPAPLEPLALHHQYGT---ETFRVLAIESLSINRREQRPDALQDPLA 1106
Query: 983 VVALAFENDSDHAVEIYVLLYCKSESH----------QRSLVG-IPDC-------KVFVC 1024
+ L F D A +L+ ++ +R+ +G +P +V V
Sbjct: 1107 AIGLVFRGDDSDADRHIMLVNSALRTNTGDDASAALTERTALGLVPTTGYTLRPTRVVVL 1166
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
E L + DPDIL+ + ++ G +G+L +RA LG L + +SR L
Sbjct: 1167 GSEAALLRQLALLCRHLDPDILVSYSLRDGGIGYLLQRAGVLGYDLASGLSRVAL----G 1222
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG-LHVGGRIVLNVWRLMR 1143
D + +ER + +M W ASG + + GR VL+VWR+M+
Sbjct: 1223 VHDPK-TERQWSLSM------------------HPWETDTASGGIRLLGRYVLDVWRIMQ 1263
Query: 1144 GEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIM 1203
EVKL+ YT V E +L R++P +P+ WF G R +E V+ RA L+++
Sbjct: 1264 SEVKLSNYTFYRVVEEILGRRMPRLPWSTQRDWFTRGTAADCRRALELVLFRAAWTLDLL 1323
Query: 1204 NQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPA 1263
LD++ R++E+A +GID SV RGSQYRVES++ RLAH Q Y+ +SP QV QPA
Sbjct: 1324 EALDILGRSAEMATSYGIDLLSVFLRGSQYRVESLMARLAHAQGYVLVSPTAAQVRCQPA 1383
Query: 1264 MECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN-------- 1315
+PLVMEPE+ +Y+DPV+VLDFQSLYPSM+IA+N+CF TCLG++L E+
Sbjct: 1384 TAFIPLVMEPEARYYSDPVLVLDFQSLYPSMIIAHNICFSTCLGRVLLDSESDWCTFASG 1443
Query: 1316 ---TLGV-SSFRPDLHVL---------RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
GV ++ PD L D++ L + PN ++V P+VR G+LP +L EI
Sbjct: 1444 IPRVFGVLEAYSPDWIGLVEALATDATPDVEALLTVLPNQTVFVKPRVRHGILPLMLREI 1503
Query: 1363 LSTRIMVK---QAIKK---LAP-------SQQILHRIFNARQLALKLIANVTYGYTAAGF 1409
L TR+M+K +AI+K AP Q ++R+ NARQ A+K IANVTYGYT+A F
Sbjct: 1504 LETRMMLKGGMEAIEKQHRTAPVPEAERLRLQAIYRMLNARQFAMKYIANVTYGYTSASF 1563
Query: 1410 SGRMPCAELADSIVQCGRSTLEKAISFVNE--NEKWKAKVIYGDTDRYTVCI 1459
SGRMPCAE+AD+IV GR +E+ ++ V A+V+YGDTD V +
Sbjct: 1564 SGRMPCAEIADAIVSAGREAMERIVATVERLWGASHGARVVYGDTDSIFVLV 1615
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 79/236 (33%)
Query: 10 IFSVRIVSIDHYMAPP-----IPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
V+I++ID+Y+ P PG+ ++ Q G+ +P +R+ G T AG CLH+H
Sbjct: 9 FLCVKIINIDYYLWQPEHLSSDPGWLERFTPAQRGR--SLPAVRIIGRTSAGSTVCLHLH 66
Query: 65 RALPYLYVPCADI------------------------PVQLRQED--------------- 85
P YVP + + L+Q D
Sbjct: 67 NTFPRTYVPLPETVAHNPEAERRWTQRLRVALERALEQLHLQQRDQRQAPDANWSANQPG 126
Query: 86 ----------------DGYMHAISLALEKAL---KVKGSAGSKRQHVH---ECSLVRAKK 123
D Y++ I++ + + K ++ +++H LV+A
Sbjct: 127 SGAATEAPSSVEDAAADRYIYDITIEWRRCIYGFKANAQRFARIRYIHPAESARLVQALA 186
Query: 124 GG-----------AVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
G V LQP+E+H+P++LQ + DY L G G + L +FR P+
Sbjct: 187 SGMLAAVDDGTMDPVLPARLQPYEAHLPYVLQVMADYGLAGFGCIGLCSGRFRPPL 242
>gi|410959876|ref|XP_003986524.1| PREDICTED: DNA polymerase zeta catalytic subunit [Felis catus]
Length = 3077
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 163/317 (51%), Positives = 221/317 (69%), Gaps = 4/317 (1%)
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
V L YT E V+ VL ++ P FRVL+ WF + R++ V++ + R + NL+++ Q
Sbjct: 2421 VALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLEQ 2480
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
LD+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +
Sbjct: 2481 LDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQ 2540
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSF 1322
C+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S
Sbjct: 2541 CVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSL 2600
Query: 1323 RPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQI 1382
R +L ++ ++ + PNG+ +V P VRKGVLPR+LEEIL TR+MVKQ++K +
Sbjct: 2601 RVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK-QDRA 2659
Query: 1383 LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEK 1442
L R+ +ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +K
Sbjct: 2660 LSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKK 2719
Query: 1443 WKAKVIYGDTDRYTVCI 1459
W A+V+YGDTD V +
Sbjct: 2720 WGARVVYGDTDSMFVLL 2736
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 35/141 (24%)
Query: 56 GQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVH 114
GQKTCLH+H PYLYVP Q+ + Y+ ++ ++++AL V G+ S QHV
Sbjct: 64 GQKTCLHLHGIFPYLYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVF 119
Query: 115 ECSLVRAK------------------------------KGGAVFDKSLQPHESHIPFLLQ 144
+ SLV + GA+ +K QPHE+HIP+LLQ
Sbjct: 120 KVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQ 179
Query: 145 FLVDYNLYGMGHLHLSKLKFR 165
+DYNLYGM ++L+ +KFR
Sbjct: 180 LFIDYNLYGMNLINLAAVKFR 200
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 16/172 (9%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP S +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2240 KETSQIDGPSLNNSYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2299
Query: 982 NVVALAFENDS-----DHAVEIYVLLYCKSE-------SHQRSLV---GIPDCKVFVCSK 1026
+ +D+ D V++ K + +Q L+ GI +V
Sbjct: 2300 CALFYCISSDTPLPDTDKTELTGVIVIDKDKPVSSQDIRYQTPLLIRSGITGLEVTYAPD 2359
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2360 EKALFQEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP 2411
>gi|393245811|gb|EJD53321.1| DNA/RNA polymerase [Auricularia delicata TFB-10046 SS5]
Length = 822
Score = 339 bits (870), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 193/509 (37%), Positives = 283/509 (55%), Gaps = 53/509 (10%)
Query: 966 AESRGDLRPDPRYDSINVVALAFENDSDHAVE----------IYVLLYCKSESHQRSLVG 1015
A S+GD P+P+ D++ V AF + +E ++ + H++ L
Sbjct: 140 ALSQGDKPPNPQSDAVCAVFYAFSPKTAGTIENASTRPRTYTTGIIAVSSATLHRKRL-- 197
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
+ K+ V EI L I ++ DPDI+ GW++Q S G+L RA + L
Sbjct: 198 -REHKMEVVDSEIDLLKRVIDVVLELDPDIVAGWEVQMASWGYLRGRANAHSVDFLEACG 256
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R ++ AG + +E T + + V GR V
Sbjct: 257 R----ARFPAGRQQGNESNTTLTHIIQLV---------------------------GRHV 285
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
LNV +MR + L+ Y +E VA VLRR++P P + LT W S R + Y+ R
Sbjct: 286 LNVREMMRVSMGLSSYNLETVAFHVLRRRLPHYPAKTLTGWMQSALPLHNSRVLAYLAER 345
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
L+I+++ + I++ E ARV GIDF S +SRGSQY+VES L R+A ++++ +SP +
Sbjct: 346 TASVLDILHETETISKHVESARVLGIDFSSSVSRGSQYKVESFLFRIAKPESFVMLSPSH 405
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+V Q + P+V+EP +GFY P+VVLDFQSLYPS+MIAYN C+ TCLG++ + +
Sbjct: 406 EEVGKQESTYATPMVLEPSAGFYPSPLVVLDFQSLYPSIMIAYNYCYSTCLGRVEGQQSH 465
Query: 1316 T-LGVSSFRPDLH----VLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
LGV RP+ +L L+D + + PNG+MY +VR G+L R+L+E+L TR+MV+
Sbjct: 466 QRLGV---RPEFKLPPGLLDKLQDYISVAPNGIMYAKKEVRAGLLGRMLQELLDTRVMVQ 522
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
QA+K + Q+ R +ARQL+LK I N TYGYT+AG GRMP E+ADS+VQ GR TL
Sbjct: 523 QAMKS-SKGDQVFQRALDARQLSLKFICNTTYGYTSAGSCGRMPAVEIADSVVQSGRETL 581
Query: 1431 EKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
E+A+ + KW A V+YGDTD VC+
Sbjct: 582 EQAMRTIQNTSKWGATVVYGDTDSIFVCL 610
>gi|156056557|ref|XP_001594202.1| hypothetical protein SS1G_04009 [Sclerotinia sclerotiorum 1980]
gi|154701795|gb|EDO01534.1| hypothetical protein SS1G_04009 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1430
Score = 339 bits (869), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 290/544 (53%), Gaps = 87/544 (15%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGAGEQ-LTLLSIEVQAESRGDLRPDPRYDSINV 983
+SQI GP ++K + + A+ Q ++++S+EV +RG P+P D +
Sbjct: 598 LSQIDGPTQKNK-QGIKYTQIEKTANIQREAQYMSVMSLEVHVNTRGSFVPNPEEDEVQC 656
Query: 984 VALAFENDSDHAVE-------IYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIK 1036
+ F+ D D + I +L + +R +P +V S E+ L +
Sbjct: 657 IFFCFQAD-DEGTDGSPSQPGIVILSADNNNISERVSNQVP-FEVHAESSELDLLIRMVG 714
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLLNDISRTPLESKIAAGDSEISERGI 1095
I+ +DPDIL G+++ GGS G+L ERA L ++ SR +S G
Sbjct: 715 IVREYDPDILTGFEVHGGSWGYLIERARVKYDYDLCDEFSRMKAQSHGRFG--------- 765
Query: 1096 TDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEA 1155
DN D+WG + S + V GR ++N+WR MR E+ L YT+E
Sbjct: 766 KDN-------------------DKWGFNNTSTIRVTGRHMINIWRAMRAELNLLQYTLEN 806
Query: 1156 VAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSEL 1215
VA +L R+IP + L W+ +G R + + + V R +L+LEI+ Q ++I+RTSE
Sbjct: 807 VAFHLLYRRIPHYTWADLRTWYTNGSARDLSKVLTHYVSRVQLDLEILEQNELISRTSEQ 866
Query: 1216 ARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPES 1275
AR+ G+DFFSV SRGSQ++VES++ R+A +N++ ISP QV Q A+ECLPLVMEP+
Sbjct: 867 ARLLGVDFFSVFSRGSQFKVESLMFRIAKPENFMLISPSRKQVGGQNALECLPLVMEPQK 926
Query: 1276 GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDE 1335
D ++ L LKD
Sbjct: 927 YTREDRLLEL----------------------------------------------LKDH 940
Query: 1336 LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALK 1395
+ I PNG+MY P +RK +L ++L EIL TR+MVK + KL + L R+ N RQLALK
Sbjct: 941 INIAPNGMMYAKPNIRKSLLAKMLGEILETRVMVKSGM-KLDKEDKALQRLLNNRQLALK 999
Query: 1396 LIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRY 1455
LIANVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI+ ++ ++W A+V+YGDTD
Sbjct: 1000 LIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIALIHSVKRWGAEVVYGDTDSL 1059
Query: 1456 TVCI 1459
V +
Sbjct: 1060 FVYL 1063
>gi|363749421|ref|XP_003644928.1| hypothetical protein Ecym_2378 [Eremothecium cymbalariae DBVPG#7215]
gi|356888561|gb|AET38111.1| Hypothetical protein Ecym_2378 [Eremothecium cymbalariae DBVPG#7215]
Length = 1469
Score = 335 bits (860), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 299/542 (55%), Gaps = 47/542 (8%)
Query: 926 SQISGPDGRSKPTPLSQIGF--QDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINV 983
SQI GP + K PL + ++ S G + LS+E+ +R P+P D + +
Sbjct: 600 SQIEGP-SQEKGVPLGSVNIPSENLKSFGDDNLIVHLSLELHILTRNSKLPNPELDPVKI 658
Query: 984 VALAFENDSDHAV-----EIYVLLYCKSESHQRSLV----GIPDCKVFVCSKEIHLFSHF 1034
+ + S + E ++ ++E SL+ G D VF E L F
Sbjct: 659 IFWSMNGCSAQRLSSVSKEGIMIFMDENEKRFESLILQACGNVDVAVF--ESEELLLQAF 716
Query: 1035 IKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERG 1094
++ DPDIL G+++ S G+L RA DI + S+IAA +G
Sbjct: 717 SDLVLIIDPDILSGYEVNKLSWGYLLARA-----NFAYDIPMDIMISRIAA-------KG 764
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
+ + + W +G+ + GR +LN+WR M+ E+ ++ Y+ E
Sbjct: 765 PRERI------------------NRWNYDRVAGVKIMGRHMLNIWRKMKSELNISKYSFE 806
Query: 1155 AVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV-EYVVGRAKLNLEIMNQLDMINRTS 1213
VLR ++P + LTK++ + V Y R N+ ++ +I++T
Sbjct: 807 NAVFHVLRERLPQYSYENLTKFWNDKSEQVNINIVINYWKKRVSYNIRLVEVQQIISKTF 866
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E AR+ GIDF+SV+SRGSQ++VES L R+ ++ ++ +SP + Q A+EC+PL+MEP
Sbjct: 867 EEARLIGIDFYSVMSRGSQFKVESFLARICKSEYFILLSPSKSALKKQKALECVPLIMEP 926
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI--LPSKENTLGVSSFRPDLHVLRD 1331
+S FY P++VLDFQSLYPS+M+AYN C+ T +G++ L +K N +G++ ++L
Sbjct: 927 QSSFYKSPLLVLDFQSLYPSVMMAYNYCYSTVIGRVRELTNKNNEIGITKINIPANILHL 986
Query: 1332 LKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQ 1391
+ + + I PNGV+++ +RK VL ++L++ILSTRI++K+ +K L ++ L N RQ
Sbjct: 987 MDEHITISPNGVLFLRENIRKSVLSKMLKDILSTRILIKETMKALPKEERSLLNSLNNRQ 1046
Query: 1392 LALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGD 1451
LALK +ANV YGYT+A +SGRMPC+++ADSIVQ GR TL KAI + W AKV+YGD
Sbjct: 1047 LALKFLANVIYGYTSASYSGRMPCSDIADSIVQTGRETLRKAIEMIESEYAWGAKVVYGD 1106
Query: 1452 TD 1453
TD
Sbjct: 1107 TD 1108
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 51/218 (23%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M DS+ S + ++ D Y + P C +SL K E P+IR+YGS P G
Sbjct: 1 MNDSESGS-LIQIQWNDYDTYQSSPTILDRQCGNSLPNRKFLEAPIIRLYGSLPGGYTVL 59
Query: 61 LHIHRALPYLYVP-------CADIPVQLRQEDDGYMHAI-SLALEKALKVKGSAGSKR-- 110
H+H PY++V ++P+ QE +H + LAL KA + + +R
Sbjct: 60 CHLHGVFPYIFVRFDSNQDNSINVPINDCQE----LHILLELALRKANNTQPNGAPERSE 115
Query: 111 ------QHVHECSLVRA------------------------------KKGGAVFDKSLQP 134
++V SLV+ + G +FDK L+
Sbjct: 116 ETIQDLRYVANVSLVKGIPFYGFHVGWSAFYKISLLNPNYVVTLSDMLRQGLLFDKKLEV 175
Query: 135 HESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDAF 172
+ESHIP+LLQ DYNL+G L LSK FR P+ + F
Sbjct: 176 YESHIPYLLQMSTDYNLFGCSWLKLSKCYFRKPILNQF 213
>gi|320168960|gb|EFW45859.1| DNA polymerase zeta catalytic subunit [Capsaspora owczarzaki ATCC
30864]
Length = 2719
Score = 332 bits (850), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 190/526 (36%), Positives = 285/526 (54%), Gaps = 77/526 (14%)
Query: 925 ISQISGPDGRS----KPTPLSQIGFQDPASAGAGEQ-LTLLSIEVQAESRGDLRPDPRYD 979
+SQI GP R+ K +PL+ + A A G Q +T+LS+EV +RGD RPDP +D
Sbjct: 1368 LSQIEGPTPRNEHQFKASPLA---IAEEAQALHGVQHVTILSLEVHVNTRGDFRPDPEHD 1424
Query: 980 SINVVALAFENDSDHAV-------------------EIYVLLYCKSESHQRSL--VGIPD 1018
+ + +D+ H V +Y ++ + L G+
Sbjct: 1425 RVAAIVYLLRHDAVHHVGGRDIQGVIMVAPSLPTATTTTTTMYDRASTAGSPLQFSGLTG 1484
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
C+V + E LF FI ++ FDPD L+G+++Q SLG+L +RA L + L ++R P
Sbjct: 1485 CRVTSVADETALFMSFIDLVAHFDPDFLVGYELQMLSLGYLVDRARRLQLDLCARLARCP 1544
Query: 1079 LE--SKIAAGDSEISERGITDNMLAEPVVA------------------------ESLLAK 1112
++ +G + + N+ V +S
Sbjct: 1545 TVPVTESESGSTSAAAAAAPPNVWKRSNVTDKQQQQQHQQPQQQQPQQQHPPPDQSTRGD 1604
Query: 1113 DAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRV 1172
A + + +H+SGL +GGR+VLNVWRLMR E+ LN+Y+ E V +L ++IP FR
Sbjct: 1605 AADAAEAYNYSHSSGLQIGGRVVLNVWRLMRSEIALNIYSFENVVYHILHQRIPKYTFRT 1664
Query: 1173 LTKWF----------------------ASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
L+ W+ + +R+R V+Y++ +A+L ++++++ D I
Sbjct: 1665 LSDWWLGQSLVRKGVASDLAFQRSPFAGTSSNLSRWRTVQYLLTKARLCIDLLDETDFIG 1724
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
RTSEL R+FGI F SV++RGSQ+RVESM+LRLA N++ ISP QVA A EC+PL+
Sbjct: 1725 RTSELGRIFGILFESVITRGSQFRVESMMLRLAKPMNFIPISPSKQQVAQMRAPECVPLI 1784
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLR 1330
+EPES FY PV+VLDFQSLYPS+MIAYN+C+ TCLG++ E G+S+ + +
Sbjct: 1785 LEPESRFYTSPVLVLDFQSLYPSVMIAYNICYSTCLGRMSRGLERAFGISTLQVPKSLSA 1844
Query: 1331 DLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ D + PN V++V VR GVLPRLL+EIL R+MVK A+K+L
Sbjct: 1845 SIADSATLTPNSVIFVKKTVRVGVLPRLLDEILRARVMVKDAMKRL 1890
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 103/227 (45%), Gaps = 68/227 (29%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
FS+RIV D YM P+P D+ + G + VPVIR+YGSTPAGQ+TCLHIHR PY
Sbjct: 72 FFSMRIVDADSYMTAPVPSLDVMRTDHDGSSCHRVPVIRLYGSTPAGQRTCLHIHRVFPY 131
Query: 70 LYVP--------------CADIPVQLRQEDDGYMH----------AISLALEK------- 98
+Y+P C + V + D + + A S+A +
Sbjct: 132 IYIPYYGPTSSDRDVRQYCCQMAVSIDVAVDAFNNTGFSAGGDSTAASVAASRQNPGLSG 191
Query: 99 -----ALKVKGSAGSKRQHVHECSLVRAK------------------------------- 122
A + G A +R+ H +V A+
Sbjct: 192 PGRPAAQQAGGFANMRRKGQHVFKIVLAQGAPFYGYAPRDRLFLKIFLFNPATVGKVVHL 251
Query: 123 -KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
+ G V + QP+E+HIPFLLQFL+D+NLYGM + LS +FR P+
Sbjct: 252 LQSGFVMGREFQPYEAHIPFLLQFLIDFNLYGMNFVQLSLARFRQPL 298
Score = 114 bits (284), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 4/96 (4%)
Query: 1364 STRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIV 1423
STR V + +L + L RI NARQL LK+IANVTYGYT+A FSGRMPC E+ADSIV
Sbjct: 2038 STRNSVSAELNEL----RALRRILNARQLGLKMIANVTYGYTSANFSGRMPCVEIADSIV 2093
Query: 1424 QCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
R TLE+ I VN+ KW A+V+YGDTD V +
Sbjct: 2094 AMARQTLERGIDLVNKTSKWGARVVYGDTDSMFVLL 2129
>gi|324500783|gb|ADY40359.1| DNA polymerase zeta catalytic subunit, partial [Ascaris suum]
Length = 1598
Score = 330 bits (847), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 206/523 (39%), Positives = 293/523 (56%), Gaps = 72/523 (13%)
Query: 956 QLTLLSIEVQAESRGDL-RPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
L ++S+E+ A +R P+P++D+ VV + + V + V + + + +L+
Sbjct: 804 HLCVMSVEIIALTRPSFPVPEPQFDA--VVGIFY------TVSLDVCMQENAFDEEWALL 855
Query: 1015 GIPDC-------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLG 1067
D ++ E LF F I+ DPD+++G+D + S G+L ER+ LG
Sbjct: 856 NSADMHIAPSGDRITCFEDECALFDAFANIVRRIDPDMVVGYDTRRYSWGYLVERSIALG 915
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
LL+ +SR P+E E+ R
Sbjct: 916 RNLLSALSRYPIEVS------------------------------------EYYRPDVPK 939
Query: 1128 LHVG----GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGR 1183
GRI+LNVWR++R E+ L Y+ V +TVL R+ P + +++W +S
Sbjct: 940 FDFNPSPRGRILLNVWRIIRHELALRCYSRSTVIQTVLNRRFPQFSNQTISEWISSDEKC 999
Query: 1184 ARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLA 1243
+ + + A+LNL+IM+QLD+ RT+E+ARV+GI F VLSRGSQ+RVESMLLRLA
Sbjct: 1000 LVDVAIRHFMLCARLNLQIMSQLDLFTRTAEMARVYGIQFAEVLSRGSQFRVESMLLRLA 1059
Query: 1244 HTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFC 1303
A S Q + A E LPL MEPESG+Y DPV+VLDFQSLYPS++IAYN CF
Sbjct: 1060 RRHRLTAPSVSPAQRTAMCAPEVLPLNMEPESGYYRDPVIVLDFQSLYPSIVIAYNYCFS 1119
Query: 1304 TCLGKILPSKENTLGVSSFRPDLHV--------LRDLKD-----ELLIPPNGVMYVPPKV 1350
TCLGK+ S+ + V+ F + + + D+ + + P G + V
Sbjct: 1120 TCLGKV--SRMDDATVTGFADSMELGGLVYSLPVEDVASMVDNGNVHVSPTGSAFCKKSV 1177
Query: 1351 RKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFS 1410
R+G++P +L+EIL+TRIMVK+A K S++ L RI +ARQ+ALKLIANVTYGY+AA FS
Sbjct: 1178 RRGIMPIMLDEILNTRIMVKKAAKDYKDSRR-LARILDARQMALKLIANVTYGYSAANFS 1236
Query: 1411 GRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
GRMPC E+AD+IV GR LE+AI+ VNE KA+VIYGDTD
Sbjct: 1237 GRMPCVEVADAIVSKGREALERAIALVNEGNYGKARVIYGDTD 1279
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 28/34 (82%)
Query: 132 LQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
LQ +E+H+P+L+QF +DY+++GM +H + +KFR
Sbjct: 147 LQVYEAHVPYLMQFFIDYSIFGMDLIHFNDVKFR 180
>gi|150863959|ref|XP_001382618.2| DNA polymerase zeta [Scheffersomyces stipitis CBS 6054]
gi|149385215|gb|ABN64589.2| DNA polymerase zeta, partial [Scheffersomyces stipitis CBS 6054]
Length = 1489
Score = 330 bits (846), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 177/437 (40%), Positives = 253/437 (57%), Gaps = 39/437 (8%)
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL-GIGLLNDISRTPLES 1081
V E+H+ + + I+ FDPDIL G+++ S G+L ER + + LL D SR ++
Sbjct: 743 VFDNELHMVNRLVSIIEKFDPDILSGYEVNASSWGYLIERFRTVYEVNLLADFSRGSYKT 802
Query: 1082 KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRL 1141
GD WG TH S + + GR ++NVWRL
Sbjct: 803 NGKFGD-------------------------------RWGYTHTSNIKINGRHIINVWRL 831
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
+R E+ L Y++E V+ +L + +P L++W S + Y R L ++
Sbjct: 832 LRHELSLTSYSLENVSYHLLHQSLPKFSNFQLSEWLRSNKFQNILTVFRYYQRRIALVIK 891
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQ 1261
I+ +++ R E +R+ GIDF S RGSQ+R+ES+L RLA ++N L SP QV
Sbjct: 892 IIEVQELVTRNVENSRLIGIDFNSNFYRGSQFRIESILSRLAKSENLLLNSPSKQQVFEM 951
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI--LPSKENTLGV 1319
+EC+PL+MEP S FY P+VVLDFQSLYPS+MIAYN CF T LG++ +N +G
Sbjct: 952 KPIECIPLIMEPNSNFYKSPLVVLDFQSLYPSVMIAYNYCFSTLLGRLHNFNPNKNEIGY 1011
Query: 1320 ---SSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
S P L L + ++ + + PNG M+V VRK +L ++LEEILSTR+ VK+ +K
Sbjct: 1012 LKNLSLPPGLVDLMEKENAITLSPNGYMFVKSNVRKSILAKMLEEILSTRVKVKEVMKLF 1071
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
++ L R+++ARQLALKLIANVTYGYT+A FSGRMP +++D+IV GR L K+I
Sbjct: 1072 RDDRE-LTRLYDARQLALKLIANVTYGYTSATFSGRMPNPDISDAIVSTGREILSKSIEI 1130
Query: 1437 VNENEKWKAKVIYGDTD 1453
+N N + AKV+YGDTD
Sbjct: 1131 IN-NGNFGAKVVYGDTD 1146
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 69/231 (29%)
Query: 1 MADSQPD-SNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKT 59
M++ Q D +N+FSV+I D Y P D Y G VN+VPVIR+YG+ + T
Sbjct: 1 MSNRQNDITNVFSVQINDYDSYQTFP-SKLDNLY-----GNVNQVPVIRIYGTIAVPKTT 54
Query: 60 -------CLHIHRALPYLYVPCADI---PVQLRQEDDGYMHAISLALEKALKVKGSAGSK 109
+H+H PYLYV C + + ++ D ++ + ++ + K
Sbjct: 55 PNLVFNVLVHVHNYYPYLYVDCFEADKRKLASKEHIDNVINYLEASMIDSFKHDHQNSRT 114
Query: 110 RQH----------------------VHECSLVRAKKGGAV---------------FDKSL 132
R+ V+ SL+ K + D +L
Sbjct: 115 RRKFIAGVSVCRGTPIYGFQLGHRLVYRISLLSPKYKTRLSKLLYERKIDLSSLELDSNL 174
Query: 133 QP-------HESHIPFLLQFLVDYNLYGMGHLHLSK--------LKFRHPV 168
+ +E+HIP+ LQFL D+NL+G G L++ K + FR PV
Sbjct: 175 KRPKKKALVYEAHIPYFLQFLADFNLFGCGWLYIDKNRNLGTKGIYFRSPV 225
>gi|294655851|ref|XP_458050.2| DEHA2C08558p [Debaryomyces hansenii CBS767]
gi|199430655|emb|CAG86117.2| DEHA2C08558p [Debaryomyces hansenii CBS767]
Length = 1588
Score = 330 bits (845), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 196/556 (35%), Positives = 297/556 (53%), Gaps = 58/556 (10%)
Query: 926 SQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVA 985
SQI P ++ S + + LT +E+ + DL P+P D I+V+
Sbjct: 710 SQIEPPITQTNDYKFSYRSEKISRRPNSFNSLTNFHLEIHVNTHNDLLPNPDVDPISVIF 769
Query: 986 LAFENDSDHAVE-----IYVLLYCKSESHQRS-----------LVGIPDCKVFVCSKEIH 1029
F +DS+H + + +L+Y + S + LV P +F S E
Sbjct: 770 YTF-SDSNHMFDKNNNKVGILIYHEPGSQREDFAKQLEKVSSFLVEKPAVAIF--SDEKS 826
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLESKIAAGDS 1088
+ + I+++ FDPDIL G++I S G++ ER + I LL + SR +S GD
Sbjct: 827 MINQLIRLVECFDPDILSGYEINALSWGYVIERFRNAYDINLLFEFSRCKFKSNGKFGD- 885
Query: 1089 EISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKL 1148
WG TH S + GR +LNVWRL+R E+ L
Sbjct: 886 ------------------------------RWGYTHTSAFKINGRHILNVWRLLRSELSL 915
Query: 1149 NMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDM 1208
Y++E ++ +L + +P L++W+ +Y + R +L ++I++ ++
Sbjct: 916 TNYSLENMSYHLLHQTLPRYSNFQLSQWYYGNDFSELLSVFKYYLRRVQLIMKIIDIQEL 975
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
I R E +R+ GIDF S RGSQ++VES+L RL +N L S QV +EC+P
Sbjct: 976 ITRNVEQSRLIGIDFNSNFYRGSQFKVESILCRLTKAENILLNSVSKQQVHEMRPLECIP 1035
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI--LPSKENTLGV---SSFR 1323
L+MEP+S FY P++VLDFQSLYPS+MIAYN C+ T LGK+ ++N +G
Sbjct: 1036 LIMEPDSNFYKSPLIVLDFQSLYPSIMIAYNYCYSTILGKLHGFSPRKNIIGYLKNLKLP 1095
Query: 1324 PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQIL 1383
P L L D L I PNG ++V +RK +L ++LEEIL+ RI VK +K +++
Sbjct: 1096 PGLVDLFAKNDGLNISPNGYVFVKSSIRKSMLAKMLEEILNARINVKSVMKLFKDDPELI 1155
Query: 1384 HRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKW 1443
+++N+RQLALKLIANVTYGYT+A FSGRMP +++AD+IV GR L ++++ + E+ +
Sbjct: 1156 -KLYNSRQLALKLIANVTYGYTSATFSGRMPNSDIADAIVSTGREILSQSVNLI-ESTNY 1213
Query: 1444 KAKVIYGDTDRYTVCI 1459
AKV+YGDTD V +
Sbjct: 1214 GAKVVYGDTDSLFVYL 1229
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 81/218 (37%), Gaps = 92/218 (42%)
Query: 41 VNEVPVIRVYGSTPAG--------------------------QKTCLHIHRALPYLYVPC 74
V +VP+IR++GS G +H+H PYLYV C
Sbjct: 30 VVQVPIIRIFGSLSVGIDDGDERSDNDHTKHSGSNKPVKFLSYNVLVHVHNYYPYLYVDC 89
Query: 75 ADIPVQLRQEDDGYMHAISLALEKAL-----KVKG---------------SAGSKRQHVH 114
+ LR E+ Y++ + LE +L + KG S G +R+ +
Sbjct: 90 FENEALLRSEN--YINQLVEYLENSLQQSFRRKKGEEEEEEEETIDVDVDSGGGERKFIA 147
Query: 115 ECSLVRAK--------------------------------------KGGAVFDK------ 130
+ ++ + + + FDK
Sbjct: 148 KVAICKGSPIYGYQVGYKLFYKISLLSPLYKTRLTTLFHDKNINICEFSSSFDKGTKKSY 207
Query: 131 SLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
++ +E+HIP+LLQFL D+NL+G G L + FR+P+
Sbjct: 208 AVNVYEAHIPYLLQFLADFNLFGCGWLEIDNTYFRYPI 245
>gi|449668904|ref|XP_004206894.1| PREDICTED: uncharacterized protein LOC100213595 [Hydra
magnipapillata]
Length = 2098
Score = 325 bits (834), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 189/529 (35%), Positives = 281/529 (53%), Gaps = 90/529 (17%)
Query: 941 SQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND--SDHAVEI 998
+Q + + + LT++SIE+ ++R +LRPDP D IN + + + +
Sbjct: 1309 TQQNISNAKAIHFNQSLTIVSIELHIQTRRNLRPDPTIDPINSIFYTMHQELLNIDVSGV 1368
Query: 999 YVLLYCKSESHQRSLV---GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGS 1055
++ C + L+ GI S E+ + F + DPDIL+G+++Q S
Sbjct: 1369 FITDTCMISQNSTQLLKKAGIAISSTHCFSDELLMLKGFSSFIQEHDPDILVGYEVQMLS 1428
Query: 1056 LGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAI 1115
+G+L ERAA L + + +SR +E+ + I KD
Sbjct: 1429 IGYLIERAAALNYNMCHAMSRI--------SSTEVYSKKI---------------QKDQ- 1464
Query: 1116 IEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTK 1175
ED W S + + GRI+LN+WR+MR E+ L +YT E V + +++ + F L++
Sbjct: 1465 -EDNWFGQLVS-MEITGRIILNLWRIMRSEIALQIYTFENVFYHICHQRVAAYSFCSLSE 1522
Query: 1176 WFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRV 1235
W+ + +R+R ++Y + R + N+ +++Q+D INRTSELAR+FGI F+SV+SRGSQ+RV
Sbjct: 1523 WWLTNS--SRWRVIDYYLKRCQGNIRLLDQIDFINRTSELARIFGILFYSVISRGSQFRV 1580
Query: 1236 ESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMM 1295
ESM+LR+A N++ +SP HQ A A EC+PLVMEPES FY DPV+VLDFQSLYPS++
Sbjct: 1581 ESMMLRIAKPMNFIPMSPSPHQRARMSAPECIPLVMEPESRFYVDPVIVLDFQSLYPSII 1640
Query: 1296 IAYNLCFCTCLGKILPSKENTL---GVSSFRPDLHVLRDLKDE--LLIPPNGVMYVPPKV 1350
IAYN CF TC+G++ EN L G +S HVL++L ++ + I PNGV +V V
Sbjct: 1641 IAYNYCFSTCIGRVKLCAENELFNFGAASLNLPFHVLQELLNDSNVHISPNGVGFVKKDV 1700
Query: 1351 RKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFS 1410
R G++PR +E A FS
Sbjct: 1701 RTGIIPRFIE---------------------------------------------LAFFS 1715
Query: 1411 GRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
+ DS+V+ GR TLE+AI VN EKW AKV+YGDTD V +
Sbjct: 1716 -------VGDSVVRKGRETLERAIHLVNSTEKWNAKVVYGDTDSLFVLL 1757
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 105/193 (54%), Gaps = 40/193 (20%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
FS+RI+ +YM PI G D C+S + + VPVIR++G+TP GQK+CLHIH+ PYL
Sbjct: 4 FSLRIIDASYYMEKPIQGLDFCFSEFRQTAIYHVPVIRIFGTTPLGQKSCLHIHQIFPYL 63
Query: 71 YVPCADIPVQLRQEDDG--YMHAISLALEKALKVK--GSAGSKRQHVHECSLVRAKK--- 123
YVP +P + D+G + +++L+ AL + S +RQHV + +V+
Sbjct: 64 YVP---LPAGV---DNGLRFCKEFAMSLDSALTISFGKSVSQQRQHVFKVEIVKKIPFYG 117
Query: 124 ---------------------------GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGH 156
G+V ++ QP E+HIPF+LQF +DYNL+GM
Sbjct: 118 YYKNEKDFLQVYLYNPNHVSVAGDLLINGSVMNQFFQPFETHIPFILQFFIDYNLHGMNF 177
Query: 157 LHLSKLKFRHPVP 169
++LS + FR P+P
Sbjct: 178 INLSSVLFRTPLP 190
>gi|358253098|dbj|GAA52053.1| DNA polymerase zeta subunit [Clonorchis sinensis]
Length = 3068
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/473 (40%), Positives = 275/473 (58%), Gaps = 40/473 (8%)
Query: 1020 KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLG--------IGLL 1071
+ C E +L S + L +DPD+L+G+D++ S G+L +RA++L L
Sbjct: 1776 RFIWCESEWNLLSWVVYFLQWYDPDLLIGYDVERYSWGYLVQRASYLNRPHYPRELSRLA 1835
Query: 1072 NDISRTPLESKIAA---------GDSEISERGITD---NMLAEPV----VAESLLAKDAI 1115
DI + P ++ A G + E +TD + P V+E +K +
Sbjct: 1836 PDIPKCPCCGRLIAFVGQFVNQSGSLHLDESTLTDMDRSACCCPCRLAPVSEKSPSKGSP 1895
Query: 1116 IED--EWGRTHASGLHVG-----GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSI 1168
+ W SG G GR+VL +WR++ E+ L Y++E V +L+ +P
Sbjct: 1896 LHRFPGWPPALVSGRTGGQFPCPGRVVLCLWRIVMSELNLYEYSLETVVLHLLKEPVPKF 1955
Query: 1169 PFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLS 1228
F L +WF PG R+R V+Y R+ +N I+ LD++ RTSE ARVFGI+FF VLS
Sbjct: 1956 GFGQLHQWFFEVPGMNRWRTVDYWCYRSLVNHRIIEALDLVGRTSEFARVFGIEFFHVLS 2015
Query: 1229 RGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD-PVVVLDF 1287
RGSQYRVES+L R AH N+L SP Q A Q A E +PL +EP+S + D PV VLDF
Sbjct: 2016 RGSQYRVESLLCRTAHAANFLLASPSVTQRAQQRAPEAIPLNLEPDSRLFVDGPVAVLDF 2075
Query: 1288 QSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVL--RDLKDELLIPPNGVMY 1345
QSLYPS+MIAYN C+ TCLG++ +++ ++ + L+ + I PNGV++
Sbjct: 2076 QSLYPSIMIAYNYCYSTCLGRLSSLEKDFFIKFFHFMFQAIIHFQTLEQNVNIAPNGVVF 2135
Query: 1346 VPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYT 1405
V +R+G+LP +L+++LSTR+MVK ++ KL + L+R+ +ARQL LKL+ANV +GYT
Sbjct: 2136 VKKSIREGILPCMLKQLLSTRLMVKDSM-KLYKEHRSLNRLLDARQLGLKLMANVIFGYT 2194
Query: 1406 AAGFSGRMPCAELADSIVQCGRSTLEKAISFVN----ENEKWKA-KVIYGDTD 1453
AA FSGRMPC ++ DSIV R TLE+AI V+ E W +V+YGDTD
Sbjct: 2195 AASFSGRMPCVDVGDSIVSKARETLEQAIQLVDSGAIELPHWTTPRVVYGDTD 2247
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P+ I +++ +D+Y + P+ D YS L+G +++PVIR+YG+TP+GQK C ++H
Sbjct: 678 PEEPILCIKLFYLDYYFSKPLTDIDNSYSDLRGSYASKLPVIRLYGTTPSGQKVCANVHG 737
Query: 66 ALPYLYVPCADIPVQLRQEDD--GYMHAISLALEKALKVK 103
LP+L+V ++P ++ ++ A +LEKA++ +
Sbjct: 738 YLPHLFV---ELPERVDSASPQCDFVRAFCTSLEKAIRSR 774
>gi|238881005|gb|EEQ44643.1| hypothetical protein CAWG_02917 [Candida albicans WO-1]
Length = 1630
Score = 320 bits (819), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/437 (38%), Positives = 253/437 (57%), Gaps = 39/437 (8%)
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLES 1081
+ E+ + + + ++ FDPDIL G+++ S G++ ER GI +++D+SR +S
Sbjct: 876 IFDDELKMITKLVTLVELFDPDILSGYEVNSMSWGYIVERLRDVFGINIMSDLSRGSFKS 935
Query: 1082 KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRL 1141
GD WG TH S + + GR +LNVWR
Sbjct: 936 NGKFGD-------------------------------RWGYTHTSNIEISGRHMLNVWRP 964
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
+R E+ L Y++E V +L + +P L++W G + + + Y + R + L+
Sbjct: 965 LRSELSLTSYSLENVTYHLLHKSLPRYSNYRLSEWLKEGTFSSIFAVLSYYINRIDIVLK 1024
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQ 1261
I+N ++I R E +R+ GI+F S RGSQY+VES+L R+ ++ L SP QV
Sbjct: 1025 IINVQELITRNVEHSRLIGIEFNSNFYRGSQYKVESILARICKPESLLLNSPSKQQVHEM 1084
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI---LPSKENTLG 1318
+EC+PL++EP+S FY P+VVLDFQSLYPS+MIAYN C+ T +GK+ P+K N
Sbjct: 1085 RPIECIPLILEPKSNFYKSPLVVLDFQSLYPSIMIAYNYCYSTLVGKLHNYRPTKNNIGY 1144
Query: 1319 VSSFRPDLHVLRDLK--DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ + + ++ L+ D I PNG ++V +RK VL ++LEEILS RI +KQ +K
Sbjct: 1145 LRNLKIPYGLVNLLQREDGFNISPNGFVFVKSHIRKSVLAKMLEEILSIRIKIKQVMKLF 1204
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ L +++N+RQLALKLIANVTYGYT+A FSGRMP +++AD+IV GR L K+I
Sbjct: 1205 KEDAE-LTKLYNSRQLALKLIANVTYGYTSATFSGRMPNSDIADAIVSTGREILNKSIEL 1263
Query: 1437 VNENEKWKAKVIYGDTD 1453
+ E + AKV+YGDTD
Sbjct: 1264 I-EAGNYGAKVVYGDTD 1279
Score = 43.9 bits (102), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 14/108 (12%)
Query: 74 CADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFD-KSL 132
C +P+ Q + + ISL L K + + + + + KK ++ +
Sbjct: 177 CKGVPIYGFQLGYRFFYKISL-LSPLYKSRLAKLFQENTISLFRIGMEKKKNVTYNPEPA 235
Query: 133 QPHESHIPFLLQFLVDYNLYGMGHLHLSK------------LKFRHPV 168
+E+HIP+LLQFL DYNL+G G +++ K L FR P+
Sbjct: 236 YVYEAHIPYLLQFLTDYNLFGCGWVNIDKDFVSQEDAKTRGLYFRSPI 283
>gi|190347734|gb|EDK40067.2| hypothetical protein PGUG_04165 [Meyerozyma guilliermondii ATCC 6260]
Length = 1593
Score = 319 bits (818), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 188/507 (37%), Positives = 275/507 (54%), Gaps = 42/507 (8%)
Query: 956 QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS---DHAVEIYVLLYCKSESHQRS 1012
+LT E+ + + PDP +S++ + F++ + D VL+ ++ ++
Sbjct: 760 RLTNFHAEIHVNTDSNSLPDPELNSVSAIFYHFDDANLMFDKIPVTGVLVNRETCNNVHL 819
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER-AAHLGIGLL 1071
L D K+ E + + ++ +FDPDIL G++I S G+L ER A I LL
Sbjct: 820 LKSAVDMKIETFEDEKSMVDRLLFLVEAFDPDILCGYEINASSWGYLVERFRAAYDINLL 879
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+SR +S GD WG TH S L +
Sbjct: 880 PLLSRCTFKSNGKFGD-------------------------------RWGYTHTSALKIN 908
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR +LNVWR+ R V L Y++E V +L + I R L+KWF S + Y
Sbjct: 909 GRHLLNVWRVFRSNVTLTSYSLENVVFHILHQTIAKCSNRSLSKWFRSDNASKLLFVLNY 968
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ R L +I++ ++I + E AR G+DF+SV RGSQY+VES+L R++ ++ L
Sbjct: 969 YMQRILLVQKILDVREIITKNVEEARFIGVDFYSVFFRGSQYKVESILSRISKVESLLLN 1028
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-- 1309
SP QV++ +E + L++EP++ FY P+VVLDFQSLYPS+MIAYN CF T LG++
Sbjct: 1029 SPSKTQVSNMKPLEAISLILEPDANFYKSPLVVLDFQSLYPSIMIAYNYCFTTLLGRLDG 1088
Query: 1310 LPSKENTLGVSS---FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTR 1366
K+NT+G P L L D++ + PNG M+ VRK +L ++LEEIL+TR
Sbjct: 1089 FDPKKNTIGFLKHLDLPPGLVNLLKENDDINLSPNGYMFAKSSVRKSLLSKMLEEILNTR 1148
Query: 1367 IMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
I VK + L ++ N+RQLALKLIANVTYGY +A FSGRMP + +AD+IV G
Sbjct: 1149 IQVKTVMSMFKDDTN-LAKLLNSRQLALKLIANVTYGYASASFSGRMPNSAIADAIVSTG 1207
Query: 1427 RSTLEKAISFVNENEKWKAKVIYGDTD 1453
R L K+I+ + E+ + AKV+YGDTD
Sbjct: 1208 REILTKSINII-ESANYGAKVVYGDTD 1233
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 85/244 (34%), Gaps = 90/244 (36%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQK------------ 58
F V+ D Y + P D Y G+V+ VP++R+YGS
Sbjct: 38 FKVQFNDYDTYQSLP-SDIDCLY-----GQVHVVPIVRIYGSFSVSNTEPQSSVATSSST 91
Query: 59 ---------------TCLHIHRALPYLYV--PCADIPVQ--------------LRQ--ED 85
T LH+H PY Y+ P +P+Q LR +D
Sbjct: 92 TASATILDESALSFTTVLHVHNFFPYFYIDAPVHSVPLQTIISYLESCLGESFLRNPGDD 151
Query: 86 DGYMHAISLALEKALKVKGSAGSKRQH------------------------------VHE 115
D Y + G + KR+ V++
Sbjct: 152 DEYENEKGTNTNLPEATAGGSDQKRRFIARISRCKGTPVYGYQVGNKCMLKVSLLSPVYK 211
Query: 116 CSLVR----AKKGGAVF---DKSLQP--HESHIPFLLQFLVDYNLYGMGHLHLSKLKFRH 166
LVR K A F + +P +E+H+P LLQFL D+NLYG G + L FR
Sbjct: 212 TRLVRLIHDKKINFANFCSTKQKFKPNVYETHLPMLLQFLTDFNLYGCGWVELDSFWFRS 271
Query: 167 PVPD 170
PV D
Sbjct: 272 PVLD 275
>gi|448080488|ref|XP_004194650.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
gi|359376072|emb|CCE86654.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
Length = 1520
Score = 317 bits (813), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 290/541 (53%), Gaps = 70/541 (12%)
Query: 944 GFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLY 1003
+ DP A L+ L +EV + + DL P+P D I+++ F N S +
Sbjct: 668 SYHDPNKASP--TLSNLYLEVHSNTFNDLLPNPLKDPISMLVYKFYNPSR--------IN 717
Query: 1004 CKSESHQRSLVGIPD-----------------CKVFVCSKEIHLFSHFIKILCSFDPDIL 1046
C+SE L+ P+ C + V E+ +F FI I DPD+L
Sbjct: 718 CESEECSGLLIYDPENFSELKHRLKGVSLSASCHLDVFDDELSMFDSFISIAVKLDPDLL 777
Query: 1047 MGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVA 1106
G+++ S G+L ER L G N+LA ++
Sbjct: 778 TGFEVHSSSWGYLIERYNSLVDG----------------------------NILA--LLG 807
Query: 1107 ESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIP 1166
+ + + I + WG TH++ GR ++N+WR+++ ++ L YT+E +++ +L + +P
Sbjct: 808 RCITSSEGIQMNRWGYTHSTSYKFNGRHMINLWRVLKSDISLTSYTLENLSQKILHQTLP 867
Query: 1167 SIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSV 1226
+ L+ W S Y R + +++ +I++TSE AR+ GIDF SV
Sbjct: 868 RYSNKQLSLWLKSCRACNLLFVSNYYFKRIDVGFQLLKSRKIISKTSEQARLTGIDFHSV 927
Query: 1227 LSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLD 1286
++RGSQ++VE++LLR++ N L S Q+ A+EC+PLVMEPES FY P++VLD
Sbjct: 928 MNRGSQFKVEAILLRISKPMNVLLNSISKTQLNQMKALECIPLVMEPESMFYKSPLLVLD 987
Query: 1287 FQSLYPSMMIAYNLCFCTCLGKI--LPSKENTLGVSSFRPDLHVLRDL------KDELLI 1338
FQSLYPS+MIAYN C+ T LGK+ K+N LG + +L V L +D L I
Sbjct: 988 FQSLYPSVMIAYNYCYSTILGKLHGFNPKKNVLG---YLKNLEVPEGLVDVLNRQDALTI 1044
Query: 1339 PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIA 1398
PNG ++V +RK +L ++LE+++S R +K + + ++ ++ ++RQLALK+I+
Sbjct: 1045 SPNGCVFVKSFIRKSILAKMLEDLISIRSTIK-STAGMFENENSIYETLDSRQLALKMIS 1103
Query: 1399 NVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVC 1458
NVTYGYT+A FSGRMP ++LADSIV GR L K+I + E+ AKV+YGDTD V
Sbjct: 1104 NVTYGYTSASFSGRMPNSDLADSIVATGRELLTKSIRLI-EDANVGAKVVYGDTDSLFVY 1162
Query: 1459 I 1459
+
Sbjct: 1163 L 1163
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 70/206 (33%), Gaps = 77/206 (37%)
Query: 40 KVNEVPVIRVYGSTPAGQ-----------KTCLHIHRALPYLYVPCADIPVQLRQED--D 86
KV +VP+IR+YG+ + H+H PY YV + ED D
Sbjct: 29 KVQKVPIIRIYGTLEIKRDPKDRQAVDYFNVLAHVHNCFPYFYVGVDSKYDDILNEDSAD 88
Query: 87 GYMHAISLALEKALKVKGSA------------------------GSKRQHVHECSLVR-- 120
+H + L + K A G KR +V S R
Sbjct: 89 KILHYLEEQLSNSFKRNKGAEDLEFEENDDVNIYDDYANDVDVSGQKRNYVASVSFCRGV 148
Query: 121 -----------------------AKKGGAVFDKSLQP---------------HESHIPFL 142
++ + +K L P +E+HIPFL
Sbjct: 149 PIYGFATQETAFIKISLLSPMFKSRLVNLINEKKLNPIDPLRSRATRSSVLLYEAHIPFL 208
Query: 143 LQFLVDYNLYGMGHLHLSKLKFRHPV 168
LQFL D+NLY L + KL FR P+
Sbjct: 209 LQFLADFNLYSCNWLLVDKLFFRSPI 234
>gi|240275145|gb|EER38660.1| polymerase zeta subunit [Ajellomyces capsulatus H143]
Length = 1503
Score = 317 bits (813), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/268 (55%), Positives = 200/268 (74%), Gaps = 2/268 (0%)
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
+ + Y + R +L+L+I+ ++I+RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +
Sbjct: 930 KVINYFLSRVQLDLKIIESNELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPE 989
Query: 1247 NYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
N++ ISPG QV Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ TCL
Sbjct: 990 NFILISPGKKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTCL 1049
Query: 1307 GKILPSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
G+++ + +N LG FR +L LKD++ I PNG++Y +VRK +L ++L EIL T
Sbjct: 1050 GRVVSWRGQNKLGFIDFRRPAGLLELLKDQINIAPNGIIYAKQEVRKSLLAKMLIEILET 1109
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R+MVK +K + L R+ N RQLALKLIANVTYGYT+A FSGRMPCAE+ADSIVQ
Sbjct: 1110 RVMVKGGMKADKDDKH-LQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQT 1168
Query: 1426 GRSTLEKAISFVNENEKWKAKVIYGDTD 1453
R TLEKAI ++ E+W A+V+YGDTD
Sbjct: 1169 ARETLEKAIVLIHSVERWGAEVVYGDTD 1196
Score = 93.2 bits (230), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 40/196 (20%)
Query: 11 FSVRIVSIDHYMAPPI---PGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
F V + +DHY A P P + + +VPVIRV+G+T GQK C H+H A
Sbjct: 4 FQVLLNCVDHYQAAPTSFDPQLPVNAGPVPKNARPKVPVIRVFGTTETGQKVCAHVHGAF 63
Query: 68 PYLYVPCADIPVQLR-QEDDGYMHAISLALEKALKV---KGSAGSKRQHVHECSLVRA-- 121
PYLY+ + L +E + + + L+++ AL + + + K +V + V+
Sbjct: 64 PYLYI---EYQGSLNPKEVNTAIRTLQLSIDHALAISYRRNAYEKKMAYVAHITFVKGIP 120
Query: 122 ----------------------------KKGGAVFDKSLQPHESHIPFLLQFLVDYNLYG 153
+ GAV + LQP+ESH+ +L Q++ DYNLYG
Sbjct: 121 FYGYHVGYRFFFKIYLFNPMNMTRLADLLRQGAVMKRVLQPYESHLQYLSQWMCDYNLYG 180
Query: 154 MGHLHLSKLKFRHPVP 169
+L SK+ FR P+P
Sbjct: 181 CAYLKSSKVTFRAPIP 196
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 925 ISQISGPDGRSKPTPLSQIGFQDPASAGA------GEQLTLLSIEVQAESRGDLRPDPRY 978
+SQI GP +++ GF+ A + ++++S+EV +RG L P+P
Sbjct: 764 LSQIEGPTQKNRH------GFKYSQKKPARNVRQEAQYMSVMSLEVHVNTRGTLVPNPEE 817
Query: 979 DSINVVALAFE------NDSDHAVEIYVLLYCKSESHQRSLVGIPD--CKVFVCSKEIHL 1030
D I+ V + ND D + I + SE+ + P + E+ L
Sbjct: 818 DEISCVFWCVQDGETEINDDDDSAGITAGIIALSENESLAARISPTMVSEFEEEHTELDL 877
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
+ + ++ DPDIL G+++ S G+L ERA +
Sbjct: 878 LTRLVDVVRQRDPDILTGYEVHNSSWGYLIERARY 912
>gi|241953567|ref|XP_002419505.1| DNA polymerase zeta catalytic subunit, putative [Candida dubliniensis
CD36]
gi|223642845|emb|CAX43100.1| DNA polymerase zeta catalytic subunit, putative [Candida dubliniensis
CD36]
Length = 1630
Score = 316 bits (809), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 167/437 (38%), Positives = 252/437 (57%), Gaps = 39/437 (8%)
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLES 1081
V E+ + + + ++ FDPDIL G+++ S G++ ER G+ ++ D+SR +S
Sbjct: 876 VFDDELKMITKLVTLVELFDPDILSGYEVNSMSWGYIVERLRDVFGMNIMLDLSRGSFKS 935
Query: 1082 KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRL 1141
GD WG TH S + + GR +LNVWR
Sbjct: 936 NGKFGD-------------------------------RWGYTHTSNIKISGRHMLNVWRP 964
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
+R E+ L Y++E VA +L + +P L++W G + + Y + R + L+
Sbjct: 965 LRSEMSLTSYSLENVAYHLLHKSLPRYSNYTLSEWLKEGNFSSLLTVLSYYINRVDIILK 1024
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQ 1261
I+N ++I R E +R+ GI+F S RGSQY+VES+L R+ ++ L SP QV
Sbjct: 1025 IINVQELITRNVEHSRLIGIEFNSNFYRGSQYKVESILARICKPESLLLNSPSKQQVHEM 1084
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI---LPSKENTLG 1318
+EC+PL++EP+S FY P+VVLDFQSLYPS+MIAYN C+ T +GK+ P+K N
Sbjct: 1085 RPIECIPLILEPKSNFYKSPLVVLDFQSLYPSIMIAYNYCYSTLVGKLHNYRPTKNNIGY 1144
Query: 1319 VSSFRPDLHVLRDLKDE--LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ + + ++ L+ E I PNG ++V +RK +L ++LEEILS RI +KQ +K
Sbjct: 1145 LHNLKIPFGLVNLLEKEDGFNISPNGFVFVKSHIRKSILAKMLEEILSIRIKIKQVMKLF 1204
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ L +++N++QLALKLIANVTYGYT+A FSGRMP +++AD+IV GR L K+I
Sbjct: 1205 KEDAE-LTKLYNSKQLALKLIANVTYGYTSATFSGRMPNSDIADAIVSTGREILNKSIEL 1263
Query: 1437 VNENEKWKAKVIYGDTD 1453
++ + AKV+YGDTD
Sbjct: 1264 IDSG-NYGAKVVYGDTD 1279
Score = 43.5 bits (101), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 12/46 (26%)
Query: 135 HESHIPFLLQFLVDYNLYGMGHLHLSK------------LKFRHPV 168
+E+HIP+LLQFL DYNL+G G +++ K L FR P+
Sbjct: 238 YEAHIPYLLQFLTDYNLFGCGWINIDKDFVSKEDAKTRGLYFRSPI 283
>gi|448085004|ref|XP_004195746.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
gi|359377168|emb|CCE85551.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
Length = 1524
Score = 315 bits (808), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 285/524 (54%), Gaps = 52/524 (9%)
Query: 953 AGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIY----VLLY----- 1003
A L+ L +EV + + DL P+P D I+++ F+N S E+ +L+Y
Sbjct: 679 ASPSLSNLYLEVHSNTFNDLLPNPLKDPISMLVYKFDNPSRVNCELEECTGLLIYDPENF 738
Query: 1004 CKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA 1063
+ + L C + V E+ +F FI I+ DPD+L G+++ S G+L ER
Sbjct: 739 SDLKYKLKGLTISSSCHLDVFDDELSMFDSFISIVVKLDPDLLTGYEVHSSSWGYLIERY 798
Query: 1064 AHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRT 1123
L G N+LA ++ + + + I + WG T
Sbjct: 799 NSLVDG----------------------------NILA--LLGRCITSSEGIQMNRWGYT 828
Query: 1124 HASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGR 1183
H++ GR ++N+WR+++ +V L Y +E +++ +L + P + L+ W S
Sbjct: 829 HSTSYKFNGRHMINLWRVLKSDVSLTSYALENLSQKILHQTFPRYSNKQLSLWLRSSRAD 888
Query: 1184 ARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLA 1243
+Y R + ++ +I++TSE AR+ GIDF SV++RGSQ++VE++LLR++
Sbjct: 889 NLSFVSDYYFKRIDVGFSLLKSRKIISKTSEQARLTGIDFHSVMNRGSQFKVEAILLRIS 948
Query: 1244 HTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFC 1303
N L S Q+ A+EC+PLVMEPES FY P++VLDFQ LYPS+MIAYN C+
Sbjct: 949 KPMNVLLNSISKTQLNQMKALECIPLVMEPESMFYKSPLIVLDFQCLYPSVMIAYNYCYS 1008
Query: 1304 TCLGKI--LPSKENTLGVSSFRPDLHVLRDL------KDELLIPPNGVMYVPPKVRKGVL 1355
T LGK+ K+N LG + +L + L +D L I PNG ++V +RK +L
Sbjct: 1009 TILGKLHGFNPKKNVLG---YLKNLEIPEGLVDVLNKQDALTISPNGCVFVKSFIRKSIL 1065
Query: 1356 PRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPC 1415
++LE++++ R +K L ++ ++ ++RQLALK+I+NVTYGYT+A FSGRMP
Sbjct: 1066 AKMLEDLITIRSTIKYT-AGLFENEHSIYEALDSRQLALKMISNVTYGYTSASFSGRMPN 1124
Query: 1416 AELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
++LADSIV GR L K+I + E+ AKV+YGDTD V +
Sbjct: 1125 SDLADSIVASGRELLTKSIRLI-EDANLGAKVVYGDTDSLFVYL 1167
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 77/207 (37%), Gaps = 77/207 (37%)
Query: 39 GKVNEVPVIRVYGS------TPAGQ-----KTCLHIHRALPYLYVPCADIPVQLRQEDDG 87
GKV +VP+IR+YG+ + GQ +H+H PY YV + ED
Sbjct: 28 GKVQKVPIIRIYGTLEIKNNSNDGQAVDYFNVLVHVHNCFPYFYVGVDSKFNDILNEDSA 87
Query: 88 --YMHAISLALEKALKV-KGS-----------------------AGSKRQHVHECSLVR- 120
+H + L + K KG+ +G KR +V S R
Sbjct: 88 AKILHYLEEQLSNSFKRNKGTEDLEYEENDDVNIYDDYVNNVDDSGQKRNYVASVSFCRG 147
Query: 121 ------------------------AKKGGAVFDKSLQP---------------HESHIPF 141
++ + +K L P +E+HIPF
Sbjct: 148 VPIYGFATQETAFIKISLLSPMFKSRLVNLINEKKLNPIDPLRSRVTRSSVLLYEAHIPF 207
Query: 142 LLQFLVDYNLYGMGHLHLSKLKFRHPV 168
LLQFL D+NLY L + KL FRHP+
Sbjct: 208 LLQFLADFNLYSCNWLAVDKLFFRHPI 234
>gi|146414932|ref|XP_001483436.1| hypothetical protein PGUG_04165 [Meyerozyma guilliermondii ATCC 6260]
Length = 1593
Score = 314 bits (804), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/507 (36%), Positives = 273/507 (53%), Gaps = 42/507 (8%)
Query: 956 QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS---DHAVEIYVLLYCKSESHQRS 1012
+LT E+ + + PDP + ++ + F++ + D VL+ ++ ++
Sbjct: 760 RLTNFHAEIHVNTDSNSLPDPELNLVSAIFYHFDDANLMFDKIPVTGVLVNRETCNNVHL 819
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER-AAHLGIGLL 1071
L D K+ E + + ++ +FDPDIL G++I S G+L ER A I LL
Sbjct: 820 LKSAVDMKIETFEDEKSMVDRLLFLVEAFDPDILCGYEINASSWGYLVERFRAAYDINLL 879
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+SR +S GD WG TH S L +
Sbjct: 880 PLLSRCTFKSNGKFGD-------------------------------RWGYTHTSALKIN 908
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR +LNVWR+ R V L Y++E V +L + I R L+KWF S + Y
Sbjct: 909 GRHLLNVWRVFRSNVTLTSYSLENVVFHILHQTIAKCSNRSLSKWFRSDNASKLLFVLNY 968
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ R L +I++ ++I + E AR G+DF+SV RGSQY+VES+L R++ ++ L
Sbjct: 969 YMQRILLVQKILDVREIITKNVEEARFIGVDFYSVFFRGSQYKVESILSRISKVESLLLN 1028
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-- 1309
SP QV++ +E + L++EP++ FY P+VVLDFQSLYPS+MIAYN CF T LG++
Sbjct: 1029 SPSKTQVSNMKPLEAISLILEPDANFYKSPLVVLDFQSLYPSIMIAYNYCFTTLLGRLDG 1088
Query: 1310 LPSKENTLGVSS---FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTR 1366
K+NT+G P L L D++ + PNG M+ VRK +L ++LEEIL+TR
Sbjct: 1089 FDPKKNTIGFLKHLDLPPGLVNLLKENDDINLSPNGYMFAKSSVRKSLLSKMLEEILNTR 1148
Query: 1367 IMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
I VK + L ++ N+RQLALKLIANVTYGY +A FSGRMP + +AD+IV G
Sbjct: 1149 IQVKTVMLMFKDDTN-LAKLLNSRQLALKLIANVTYGYASASFSGRMPNSAIADAIVSTG 1207
Query: 1427 RSTLEKAISFVNENEKWKAKVIYGDTD 1453
R L K+I+ + E + AKV+YGDTD
Sbjct: 1208 REILTKSINII-ELANYGAKVVYGDTD 1233
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 85/244 (34%), Gaps = 90/244 (36%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQK------------ 58
F V+ D Y + P+ D Y G+V+ VP++R+YGS
Sbjct: 38 FKVQFNDYDTYQSLPL-DIDCLY-----GQVHVVPIVRIYGSFSVSNTEPQSSVATSSST 91
Query: 59 ---------------TCLHIHRALPYLYV--PCADIPVQ--------------LRQ--ED 85
T LH+H PY Y+ P +P+Q LR +D
Sbjct: 92 TASATILDESALSFTTVLHVHNFFPYFYIDAPVHSVPLQTIISYLESCLGESFLRNPGDD 151
Query: 86 DGYMHAISLALEKALKVKGSAGSKRQH------------------------------VHE 115
D Y + G + KR+ V++
Sbjct: 152 DEYENEKGTNTNLPEATAGGSDQKRRFIARISRCKGTPVYGYQVGNKCMLKVSLLSPVYK 211
Query: 116 CSLVR----AKKGGAVFDKSLQP-----HESHIPFLLQFLVDYNLYGMGHLHLSKLKFRH 166
LVR K A F + Q +E+H+P LLQFL D+NLYG G + L FR
Sbjct: 212 TRLVRLIHDKKINFANFCSTKQKFKPNVYETHLPMLLQFLTDFNLYGCGWVELDSFWFRS 271
Query: 167 PVPD 170
PV D
Sbjct: 272 PVLD 275
>gi|350644225|emb|CCD61029.1| DNA polymerase zeta catalytic subunit, putative [Schistosoma mansoni]
Length = 1257
Score = 313 bits (803), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 237/747 (31%), Positives = 356/747 (47%), Gaps = 133/747 (17%)
Query: 830 CLYMLRPPFSPPSVDSVHKWLLHDDKGASGDMDKASVEHSSLKGSDIRPVLEEMHQEADE 889
C RP + P ++ V+ WL D K V D + E++ E D+
Sbjct: 82 CTPFWRPVYPAPRLNVVNNWL--KQSKTLQDFKKLEVMKKDFACMDSQ---SEINHENDK 136
Query: 890 MI--STEPTPDLNGVTAIMHNEGHIAEPNACADCLQDISQISGPDGRSKPTP-------- 939
I S E P V I I E NA D Q + S + TP
Sbjct: 137 EIKLSNEFLPQCTTVDLI---SSSIDEKNA-IDGYQTLLYSSEHEQSIDATPHSTDHSVS 192
Query: 940 -LSQIGFQDPASAGAGEQLTLLSIEVQAESR----------------------------G 970
L Q Q S+ + T+ S+E+ SR
Sbjct: 193 VLYQGANQRCFSSVQVDYTTVASLELHCSSRLIKSQSLSNQNNLNKLTQSNLIKRSLLKC 252
Query: 971 DLRPDPRYDSINVVALAF----------ENDSDHAVEIYVLLYCKS---ESHQRSLVGIP 1017
L PDP +DSI + L+F D+ + ++++VL++ +S +H + G
Sbjct: 253 GLIPDPIFDSIQIACLSFLRPQQSYTMESMDNAYHIDLFVLIHSESLNNYTHGLTNFGYG 312
Query: 1018 DCK---------VFVCSKEIHLFSHFIKILCSFDPDIL-------MGWDIQGGSLGFLAE 1061
+ K + CS E +L S + ++ +FDP+IL W L
Sbjct: 313 NKKHKLHHIIPRIIWCSTEWNLISWIVYLVQTFDPEILIGYDIERFSWGYLVERANHLGR 372
Query: 1062 RA-----AHLGIGLLN------------DISRTPLESKIAAGDSEI-------SERGITD 1097
R + L ++N I +TP + +E ++ + D
Sbjct: 373 RTFTRELSRLASDIINCPHCHQCIDKCIKIVQTPPTTPSLNAATERNSPWHFNTQEFVND 432
Query: 1098 -----NMLAEPVVAESLLAKDAIIEDE--------WGRTHASGLHVG-----GRIVLNVW 1139
N P+ + ++ K + + W ++G G GR+VL W
Sbjct: 433 LNDLCNCPCNPLYSTTITNKQSDHANNANINYRRIWPCDSSAGRTGGPFACPGRVVLCFW 492
Query: 1140 RLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLN 1199
R++ E+ L Y+VE V +L+ +P F L +W+ + G R+R ++Y + R+ +N
Sbjct: 493 RILMHEISLYEYSVETVVYHLLKEFMPRYTFAQLNEWYMNMNGANRWRTIDYWIRRSIVN 552
Query: 1200 LEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVA 1259
L ++N LD+I RTSE AR+FGI+F+ VLSRGSQYRVES+L R+A N++ SP Q A
Sbjct: 553 LRLLNTLDLIGRTSEFARIFGIEFYHVLSRGSQYRVESLLCRIARQSNFILPSPSVTQRA 612
Query: 1260 SQPAMECLPLVMEPESGFYAD-PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTL- 1317
Q A E +PL +EPES F+ D P+ VLDFQSLYPS++IAYN C+ T LG + S +
Sbjct: 613 HQLAPEGIPLNLEPESVFFIDGPIAVLDFQSLYPSVIIAYNYCYSTLLGHVRTSDPFQVF 672
Query: 1318 --GVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+S FR ++L+ + E+ I PNGV++V +R+G+LPR+L+++++TR+MVK +I K
Sbjct: 673 RPNLSEFRIATNLLKRIGREVNISPNGVVFVKKSIREGILPRMLKQLITTRLMVKDSI-K 731
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
L + + L+R+ +ARQL LKL+ANV +GYTAA FSGRMPC +L DSIV R LE AI
Sbjct: 732 LYKTNKCLNRLLDARQLGLKLMANVIFGYTAASFSGRMPCVDLGDSIVHKAREILENAIE 791
Query: 1436 FVNE---------NEKWKAKVIYGDTD 1453
VN N +V+YGDTD
Sbjct: 792 LVNSGKIVLPDTCNGLPTPRVVYGDTD 818
>gi|255726064|ref|XP_002547958.1| hypothetical protein CTRG_02255 [Candida tropicalis MYA-3404]
gi|240133882|gb|EER33437.1| hypothetical protein CTRG_02255 [Candida tropicalis MYA-3404]
Length = 1634
Score = 311 bits (797), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 283/512 (55%), Gaps = 48/512 (9%)
Query: 957 LTLLSIEVQAES-RGDLRPDPRYDSINVVALAFENDS---DH-AVEIYVLLYCKSESHQR 1011
LT +E+ A L DP D + ++ +F++ + DH + +L++ K++
Sbjct: 805 LTSFHLEIHANPPNSKLTVDPLRDPVCLIIYSFDDANVMFDHCKFKSGILMFDKTKRIDE 864
Query: 1012 SLVGIP----DCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-L 1066
+ + + D + + E+ +F+ + ++ FDPDIL G+++ S G+L ER+
Sbjct: 865 NTISLLSTTLDQHIEIFEDELEMFAKLVNLVELFDPDILSGYEVNSMSWGYLVERSKMVF 924
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
+ L+ ++SR +S GD WG TH S
Sbjct: 925 DLNLMANLSRGNFKSNGKFGD-------------------------------RWGYTHTS 953
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ + GR +LNVWR++R E+ L Y++E V +L +P L++W +
Sbjct: 954 NIEISGRHMLNVWRILRSEMSLTSYSLENVTYHLLHHTLPKYSNYQLSQWLSKKRFSDIV 1013
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
+ Y R L+I+N ++I R E +R+ GI+F S RGSQ+++ES+L R+A +
Sbjct: 1014 IVLSYYTERVNTILKIINVQELITRNVEHSRLIGIEFNSNFYRGSQFKIESILSRIAKPE 1073
Query: 1247 NYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
+ L SP V +EC+PL++EP+S FY P+VVLDFQSLYPS+MIAYN C+ T L
Sbjct: 1074 SLLLNSPSKQDVHEMRPIECIPLILEPKSNFYKSPLVVLDFQSLYPSIMIAYNYCYSTLL 1133
Query: 1307 GKI---LPSKENTLGVSSFR--PDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEE 1361
K+ PSK + + + + P L L +D + I PNG ++V +RK +L ++LEE
Sbjct: 1134 CKLHNYKPSKNDIGYLKNLKLAPGLVDLLIKEDGVNISPNGFVFVKSHIRKSILAKMLEE 1193
Query: 1362 ILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADS 1421
IL+ RI VK+ +K + L R++NARQLALKLIANVTYGYT+A FSGRMP ++++D+
Sbjct: 1194 ILNIRIKVKEVMKLFKDDTE-LTRLYNARQLALKLIANVTYGYTSATFSGRMPNSDISDA 1252
Query: 1422 IVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
IV GR L K+I + E K+ AKV+YGDTD
Sbjct: 1253 IVSTGREILNKSIQMI-EAGKYGAKVVYGDTD 1283
Score = 42.7 bits (99), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 15/51 (29%)
Query: 133 QPH---ESHIPFLLQFLVDYNLYGMGHLHLSK------------LKFRHPV 168
+PH E HIP+LLQFL D+NL+G G L++ K L FR P+
Sbjct: 236 EPHYVYEGHIPYLLQFLTDFNLFGCGWLNIDKDYIEKGNAKTRGLYFRSPI 286
>gi|260944378|ref|XP_002616487.1| hypothetical protein CLUG_03728 [Clavispora lusitaniae ATCC 42720]
gi|238850136|gb|EEQ39600.1| hypothetical protein CLUG_03728 [Clavispora lusitaniae ATCC 42720]
Length = 1533
Score = 311 bits (796), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/514 (35%), Positives = 284/514 (55%), Gaps = 50/514 (9%)
Query: 956 QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAV----EIYVLLYC------K 1005
L++L +EV A++ RPDP D I ++ F+ DS+H +L+C +
Sbjct: 694 NLSMLYMEVHADTESPCRPDPLKDPITMIIYRFD-DSNHMFPDEYSTNRILFCCNKDFVQ 752
Query: 1006 SESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH 1065
++ + + + + E+ + F+ + FDP+IL G++I S G+L ER +
Sbjct: 753 TKRQLKIVSSNLNLHIECFRTEMEMVDSFLLRVDLFDPEILGGYEINASSWGYLIERMQN 812
Query: 1066 L-GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
+ I +L+ +SRT ++ GD WG TH
Sbjct: 813 VYAINILSRLSRTKIKGNGRYGD-------------------------------RWGFTH 841
Query: 1125 ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRA 1184
S + + GR ++NVWR+++ EV L Y++E ++ +L + +P LT W G +
Sbjct: 842 TSAIKINGRHLINVWRILKSEVNLTSYSLENLSFNLLHQTMPRFSNLELTNWRRGGAIQE 901
Query: 1185 RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
EY R L I + ++I + E +R+ GIDF S RGSQY+VES+L+R+A
Sbjct: 902 LIMFCEYYSTRLNSALLITDSREIIIKNVEQSRLIGIDFNSNFYRGSQYKVESILIRIAK 961
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
++N L SP QV A++ +PL+MEPE+ FY P+VVLDFQSLYPS+MIAYN C+ T
Sbjct: 962 SENVLLNSPSKQQVHEMRALDAIPLIMEPEANFYKSPLVVLDFQSLYPSIMIAYNYCYST 1021
Query: 1305 CLGKI--LPSKENTLGVSSFRPDLHVLRDLKDE---LLIPPNGVMYVPPKVRKGVLPRLL 1359
+GK +N +G + D+ D+ + I PNG+++V K RK +L ++L
Sbjct: 1022 LIGKAEGFRQDKNAVGYLKHHNLPLGIVDILDKNGGITISPNGLVFVSSKFRKSLLSKML 1081
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
+EIL+ RI VK ++ + L ++ N++QLALKLIANVTYGYT+A FSGRMP +++A
Sbjct: 1082 QEILNMRINVK-SVASAFQNDDDLSKVCNSKQLALKLIANVTYGYTSATFSGRMPNSDIA 1140
Query: 1420 DSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
D+IV GR L K+I + E+ ++ AKV+YGDTD
Sbjct: 1141 DAIVASGREILSKSIQII-EDSEFNAKVVYGDTD 1173
Score = 43.5 bits (101), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 121 AKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
K+ ++F ++ +E+HI FL QF+ D+NLYG G L + FR P+
Sbjct: 180 VKEKKSIFTPNI--YEAHINFLTQFMADFNLYGCGWLEIDSCFFRSPI 225
>gi|350578363|ref|XP_003480351.1| PREDICTED: DNA polymerase zeta catalytic subunit [Sus scrofa]
Length = 1024
Score = 310 bits (794), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 157/319 (49%), Positives = 216/319 (67%), Gaps = 19/319 (5%)
Query: 1144 GEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIM 1203
GEV ++ +E V +T R+ + P + T+W + V++ + R + NL+++
Sbjct: 383 GEV--GVWEMETVVQT---RRHRNSPLLLSTEW----------KMVDHYISRVRGNLQML 427
Query: 1204 NQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPA 1263
QLD+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A
Sbjct: 428 EQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRA 487
Query: 1264 MECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVS 1320
+C+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +
Sbjct: 488 PQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKHDEFKFGCT 547
Query: 1321 SFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ 1380
S R +L ++ ++ + PNG+ +V P VRKGVLPR+LEEIL TR+MVKQ++K
Sbjct: 548 SLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK-QD 606
Query: 1381 QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN 1440
+ L R+ ARQL LKLIANVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN+
Sbjct: 607 RALSRMLEARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDT 666
Query: 1441 EKWKAKVIYGDTDRYTVCI 1459
+KW A+V+YGDTD V +
Sbjct: 667 KKWGARVVYGDTDSMFVLL 685
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 35/146 (23%)
Query: 51 GSTPAGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSK 109
G GQKTCLH+H PYLYVP Q+ + Y+ ++ ++++AL V G S
Sbjct: 38 GVGSEGQKTCLHLHGIFPYLYVPYDGYG----QQPESYLSQMAFSIDRALNVALGKPSST 93
Query: 110 RQHVHECSLVRAK------------------------------KGGAVFDKSLQPHESHI 139
QHV + SLV + GA+ +K QPHE+HI
Sbjct: 94 AQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHI 153
Query: 140 PFLLQFLVDYNLYGMGHLHLSKLKFR 165
P+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 154 PYLLQLFIDYNLYGMNLINLAAVKFR 179
>gi|448522872|ref|XP_003868799.1| Rev3 protein [Candida orthopsilosis Co 90-125]
gi|380353139|emb|CCG25895.1| Rev3 protein [Candida orthopsilosis]
Length = 1719
Score = 308 bits (789), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/515 (34%), Positives = 278/515 (53%), Gaps = 55/515 (10%)
Query: 957 LTLLSIEVQAES-RGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKS--------- 1006
L+ +E+ A L DP D I + +F D A E++ + CKS
Sbjct: 892 LSSFHLEIHASPPNSKLAVDPLRDPILFIFYSF----DDANEMFDMSKCKSGVLVFNNNN 947
Query: 1007 --ESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
L + + +E + ++++ +DPDIL G+++ S G++ ER
Sbjct: 948 YNNDFFSRLSKSSGLYIVLFDEERKMVEKLVELVEMYDPDILSGYEVNSMSWGYIVERFR 1007
Query: 1065 HL-GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRT 1123
+ + +++++SR S GD WG T
Sbjct: 1008 EVYQVNIMSELSRGTHRSNGKLGD-------------------------------RWGYT 1036
Query: 1124 HASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGR 1183
H + + + GR +LNVWR+++ E+ L YT+E V +L R +P +++W SG +
Sbjct: 1037 HTASIEINGRHILNVWRILKSELALTSYTLENVCYHLLHRSLPRYSLHQISQWLQSGKFK 1096
Query: 1184 ARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLA 1243
Y + R +L L+I++ ++I R E +R+ GI+F S RGSQY+VES+L R++
Sbjct: 1097 DIQVAFLYYMRRIELTLKIISVRELITRNVEHSRLIGIEFNSNFYRGSQYKVESILSRIS 1156
Query: 1244 HTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFC 1303
T++ L SP QV +EC+PL++EP++ FY P+VVLDFQSLYPS+MIAYN C+
Sbjct: 1157 KTESILLNSPSKMQVHEMRPIECIPLILEPKANFYKSPLVVLDFQSLYPSIMIAYNYCYS 1216
Query: 1304 TCLGKI--LPSKENTLGV---SSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRL 1358
T +GK+ K+N +G + P L L D + + PNG +V VRK +L ++
Sbjct: 1217 TLIGKLHNFKPKKNNIGYLKNHNLPPGLVDLLTTDDAVNVSPNGFAFVKSHVRKSILAKM 1276
Query: 1359 LEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAEL 1418
LEEIL+ RI K ++ KL L +++NARQ+ALKLIANVTYGY +A FSGRMP +++
Sbjct: 1277 LEEILNIRIKTK-SVMKLFKDDTELTKLYNARQIALKLIANVTYGYASATFSGRMPNSDI 1335
Query: 1419 ADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
AD+IV GR L+K+I + E+ + AKV+YGDTD
Sbjct: 1336 ADAIVSTGREILDKSIEMI-ESGDYGAKVVYGDTD 1369
Score = 40.4 bits (93), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 135 HESHIPFLLQFLVDYNLYGMGHLHLSK-----------LKFRHPVPDAFFPRKFNYSSKQ 183
+E+H+P+LLQFL D+NL+G G L + + L FR P+ ++++S +
Sbjct: 302 YEAHLPYLLQFLTDFNLFGCGWLVIDRDHVNNGPRTKGLYFRTPIFSKLQHGRYSHSQMR 361
Query: 184 ASADF 188
A + +
Sbjct: 362 ALSSY 366
>gi|256071589|ref|XP_002572122.1| DNA polymerase zeta catalytic subunit [Schistosoma mansoni]
Length = 1518
Score = 307 bits (787), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 222/335 (66%), Gaps = 14/335 (4%)
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+VL WR++ E+ L Y+VE V +L+ +P F L +W+ + G R+R ++Y
Sbjct: 746 GRVVLCFWRILMHEISLYEYSVETVVYHLLKEFMPRYTFAQLNEWYMNMNGANRWRTIDY 805
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ R+ +NL ++N LD+I RTSE AR+FGI+F+ VLSRGSQYRVES+L R+A N++
Sbjct: 806 WIRRSIVNLRLLNTLDLIGRTSEFARIFGIEFYHVLSRGSQYRVESLLCRIARQSNFILP 865
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYAD-PVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
SP Q A Q A E +PL +EPES F+ D P+ VLDFQSLYPS++IAYN C+ T LG +
Sbjct: 866 SPSVTQRAHQLAPEGIPLNLEPESVFFIDGPIAVLDFQSLYPSVIIAYNYCYSTLLGHVR 925
Query: 1311 PSKENTL---GVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
S + +S FR ++L+ + E+ I PNGV++V +R+G+LPR+L+++++TR+
Sbjct: 926 TSDPFQVFRPNLSEFRIATNLLKRIGREVNISPNGVVFVKKSIREGILPRMLKQLITTRL 985
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
MVK +I KL + + L+R+ +ARQL LKL+ANV +GYTAA FSGRMPC +L DSIV R
Sbjct: 986 MVKDSI-KLYKTNKCLNRLLDARQLGLKLMANVIFGYTAASFSGRMPCVDLGDSIVHKAR 1044
Query: 1428 STLEKAISFVNE---------NEKWKAKVIYGDTD 1453
LE AI VN N +V+YGDTD
Sbjct: 1045 EILENAIELVNSGKIVLPDTCNGLPTPRVVYGDTD 1079
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
S++I S+D+Y + P DI YS + +PVIRVYG+T GQK C ++H LPY+
Sbjct: 6 LSIKIFSLDYYFSLPNDLLDIGYSKFARCYSHRIPVIRVYGTTHTGQKICANVHGVLPYI 65
Query: 71 YVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSA 106
++ ++ L D ++ + L+LEK+++ K S
Sbjct: 66 FIELPNVDSDL----DDFVQSFVLSLEKSIRTKLST 97
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 1020 KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLG 1067
++ CS E +L S + ++ +FDP+IL+G+DI+ S G+L ERA HLG
Sbjct: 585 RIIWCSTEWNLISWIVYLVQTFDPEILIGYDIERFSWGYLVERANHLG 632
>gi|354548042|emb|CCE44777.1| hypothetical protein CPAR2_405800 [Candida parapsilosis]
Length = 1698
Score = 307 bits (786), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 278/514 (54%), Gaps = 53/514 (10%)
Query: 957 LTLLSIEVQAES-RGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVG 1015
L+ +E+ A L DP D + + +F D A E++V CK+ +
Sbjct: 871 LSSFHLEIHASPPNSKLAVDPLRDPVLFIFYSF----DDANEMFVTSKCKTGVLVLNNNN 926
Query: 1016 IPDCKVFVCSKEIHLF-----------SHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
SK + LF I+ + +DPDIL G+++ S G++ ER
Sbjct: 927 YNVELFTRMSKSLGLFIELFDEETKMVEKLIEFVGIYDPDILSGYEVNSMSWGYVVER-- 984
Query: 1065 HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
++ + + SK++ G + + D WG TH
Sbjct: 985 ------FREVYQLNIMSKLSRGTHR----------------------SNGKLGDRWGYTH 1016
Query: 1125 ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRA 1184
+ + + GR +LNVWR+++ E+ L YT+E V +L R +P +++W SG +
Sbjct: 1017 TANIEINGRHILNVWRILKSEMALTSYTLENVCYHLLHRPLPRYSLHQISQWLQSGRFKD 1076
Query: 1185 RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
+ Y + R +L L+I++ ++I R E +R+ GI+F S RGSQY+VES+L R++
Sbjct: 1077 IQVALSYYMKRIELTLKIISVQELITRNVEHSRLIGIEFNSNFYRGSQYKVESILSRISK 1136
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
+++ L SP QV +EC+PL++EP+S FY P+VVLDFQSLYPS+MIAYN C+ T
Sbjct: 1137 SESILLNSPSKVQVHEMRPIECIPLILEPKSNFYKSPLVVLDFQSLYPSIMIAYNYCYST 1196
Query: 1305 CLGKI--LPSKENTLGV---SSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLL 1359
+GK+ K+N +G + P + L D + I PNG +V VRK +L ++L
Sbjct: 1197 LIGKLHNFKPKKNNIGYLKNLNLPPGIVDLLMEDDAVNISPNGFAFVKSHVRKSILAKML 1256
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
EEIL+ R+ K ++ KL L +++NARQ+ALKLIANVTYGYT+A FSGRMP +++A
Sbjct: 1257 EEILNIRLKTK-SVMKLFKDDTELTKLYNARQIALKLIANVTYGYTSATFSGRMPNSDIA 1315
Query: 1420 DSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
D+IV GR L+K+I + E + AKV+YGDTD
Sbjct: 1316 DAIVSTGREVLDKSIEMI-EAGGYGAKVVYGDTD 1348
>gi|320592419|gb|EFX04849.1| DNA polymerase zeta catalytic [Grosmannia clavigera kw1407]
Length = 2153
Score = 305 bits (781), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/567 (35%), Positives = 287/567 (50%), Gaps = 110/567 (19%)
Query: 948 PASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAF-END--SDHAVEIYVLLYC 1004
P + G + +L +E+ A SRG P+P D + V E D +D E V+
Sbjct: 662 PKARSRGGGMRVLVLELHANSRGTFLPNPERDPVQCVFWRVSETDRATDRDAESGVITVQ 721
Query: 1005 KSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
+ +++ +V V + E L +++ DPDIL G++ S G+LAERAA
Sbjct: 722 RLLRYEK--------RVEVATDERDLLKRVVELARRLDPDILAGYETTASSWGYLAERAA 773
Query: 1065 ---HLGIGLLNDISRT--PLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE 1119
GL + R P ES + ERG +M
Sbjct: 774 LYTETEDGLWQALGRIQQPRESAMF-------ERGDQSHM-------------------- 806
Query: 1120 WGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFAS 1179
V GR VL + +R + L YT+ + A +LR ++P+ RVLT W S
Sbjct: 807 ----------VTGRHVLGIATAVRTDADLRQYTIASAAWKLLRLRVPTYGPRVLTGWATS 856
Query: 1180 GPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESML 1239
G R R V + RA + ++ + + RTSE ARV G+DF SVL RGSQY+VES++
Sbjct: 857 GRARDLTRLVRFGCHRAAVGAALLQVTEFVARTSEQARVLGVDFASVLGRGSQYKVESVM 916
Query: 1240 LRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYN 1299
LR+A + ++ SP QV Q A E PLV+EP SGFY+ PV+VLDF SLYPS+MIAYN
Sbjct: 917 LRVAKPECFVLPSPSREQVGHQKAAEVAPLVLEPRSGFYSSPVIVLDFASLYPSLMIAYN 976
Query: 1300 LCFCTCLGKILP-----------------------SKEN--------------------- 1315
LC+ T LG + P S EN
Sbjct: 977 LCYSTFLGSLDPLYDERPRQKRDVKPHETDLNSSGSAENEPAEGAVTTTVADTDNIKAST 1036
Query: 1316 --TLGVSSF-RPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+G +++ RPD + + +++ P G++Y R+ +L R+L E+L TR+MV+ A
Sbjct: 1037 SIKMGFTTYERPDGLLESANRLGVVVAPTGMLYAGASTRQSLLARMLAELLRTRVMVRAA 1096
Query: 1373 IKKL-----APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
+ + A +Q LH RQLALKL+ANVTYGYT+A FSGRMPC E+ADSIVQ GR
Sbjct: 1097 MGENGDGADASEKQRLHH----RQLALKLLANVTYGYTSASFSGRMPCVEVADSIVQAGR 1152
Query: 1428 STLEKAISFVNENEKWK-AKVIYGDTD 1453
TL++A++ ++ + +W+ A+V+YGDTD
Sbjct: 1153 QTLDRAMALIHADARWQPAEVVYGDTD 1179
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 75/148 (50%), Gaps = 25/148 (16%)
Query: 43 EVPVIRVYGSTPAGQKTCLHIHRALPYLYVPC------AD---IPVQLRQEDD---GYMH 90
VP+IRV+G+TPAG+ C HIH A PYL+VP AD + QLR+ D G +
Sbjct: 62 RVPIIRVFGATPAGKTACAHIHGAFPYLFVPFDGYFQPADADKVMDQLRRGLDQALGRIT 121
Query: 91 AISLALEKALKVKGSAGSKR-----------QHVHECSLVRAKKGGAVFDKSLQPHESHI 139
+++ L + + G R ++R + G + +LQPHE+H+
Sbjct: 122 VLAVTLARGVPFYGFHVGLRLFCKIYLLDPAAMSRAAEMLRLGRIGGL--PALQPHEAHV 179
Query: 140 PFLLQFLVDYNLYGMGHLHLSKLKFRHP 167
PF+LQF+ DYNLYG L S R P
Sbjct: 180 PFVLQFMTDYNLYGCDVLRASTATARRP 207
>gi|149241046|ref|XP_001526263.1| hypothetical protein LELG_02821 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450386|gb|EDK44642.1| hypothetical protein LELG_02821 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1803
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/436 (37%), Positives = 245/436 (56%), Gaps = 37/436 (8%)
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESK 1082
+ E + ++++ FDPDIL G+++ S G++ ER R E+
Sbjct: 1048 IYDDEQEMIMRLVELVNIFDPDILSGYEVNSMSWGYIIERC------------RLVFETT 1095
Query: 1083 IAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLM 1142
I + S ++R + D WG TH + + + GR +LNVWR++
Sbjct: 1096 IMSDLSRGTQRS------------------NGKFGDRWGYTHTANIEINGRHILNVWRIL 1137
Query: 1143 RGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEI 1202
+ ++ L YT+E V +L +P L++W+ SG + Y Y + R +L ++I
Sbjct: 1138 KSDLSLTSYTLENVCYHLLHVSVPRYLAHQLSQWWQSGNFQNLYVVASYYMRRIELTMKI 1197
Query: 1203 MNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQP 1262
+ ++I R E +R+ GI+F S RGSQY+VES+L R+ ++ L SP +QV
Sbjct: 1198 IFVQELITRNVEHSRLIGIEFNSNFYRGSQYKVESILARITKPESLLLNSPSKYQVHEMR 1257
Query: 1263 AMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI--LPSKENTLGVS 1320
+EC+PLVMEP+S FY P++VLDFQSLYP++MIAYN CF T +GK+ K+N +G
Sbjct: 1258 PIECIPLVMEPKSSFYKSPLIVLDFQSLYPTIMIAYNYCFSTLIGKLHNFKPKKNNVGYL 1317
Query: 1321 S---FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA 1377
P + L D + + PNG +V VRK VL ++LEEIL+ RI K +K
Sbjct: 1318 KNLDLPPGMIDLLKNDDAINVSPNGFAFVKSHVRKSVLAKMLEEILNIRIKTKSVMKMFG 1377
Query: 1378 PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
+ L +++N+RQ ALKLIANVTYGY +A FSGRMP ++AD+IV GR L K+I +
Sbjct: 1378 DDTE-LKKLYNSRQTALKLIANVTYGYASATFSGRMPNPDIADAIVSSGREILGKSIELI 1436
Query: 1438 NENEKWKAKVIYGDTD 1453
EN + AKV+YGDTD
Sbjct: 1437 -ENGGYGAKVVYGDTD 1451
>gi|344231485|gb|EGV63367.1| DNA/RNA polymerase [Candida tenuis ATCC 10573]
Length = 1457
Score = 303 bits (775), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 285/522 (54%), Gaps = 52/522 (9%)
Query: 956 QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAV-----EIYVLLYCKS--ES 1008
+LT +EV + P+P+ D I+V+ F DS+ V + +L+ KS +
Sbjct: 617 ELTNFLMEVHVNTSSTKLPNPQTDEISVIFYKFI-DSNAMVPSPILKSGILINKKSFPDI 675
Query: 1009 HQRSLVGIP----DCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER-A 1063
+ +LVG+ D + + E S ++++ FDPDIL G++I S G+L ER
Sbjct: 676 SKLNLVGLRRILGDIQFLIFDNESSAVSKLLEVVEYFDPDILSGFEINSMSWGYLVERFQ 735
Query: 1064 AHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRT 1123
L I LL+ +SR+ + + GD WG T
Sbjct: 736 KKLNISLLSQLSRSKINNTGKFGD-------------------------------RWGYT 764
Query: 1124 HASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGR 1183
H S + + GR LNVWR++R ++ LN YT E + + +P I + L+ F G +
Sbjct: 765 HTSNIRIVGRYTLNVWRVLRKDLALNNYTFENCCYNIYHQTLPKIENQRLSS-FLKGEFK 823
Query: 1184 ARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLA 1243
+ Y V + + ++ LD+I++ EL+R+ GIDF S RGSQ++VES+L RLA
Sbjct: 824 EQLFGFSYYVNKLNIVEYFISSLDIIDKNVELSRLVGIDFNSNFYRGSQFKVESILSRLA 883
Query: 1244 HTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFC 1303
+N+L SP V +E +PL+MEP SGFY P++VLDFQSLYPS++IAYNLC+
Sbjct: 884 KAENFLLNSPSKEHVHQMKPLEQIPLIMEPNSGFYKSPLLVLDFQSLYPSIVIAYNLCYS 943
Query: 1304 TCLGKI---LPSKE--NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRL 1358
T L ++ PSK L + P + L D L + NG+++V K+RK +L ++
Sbjct: 944 TFLCRLHGFKPSKNPIGYLNHMNLSPMIIDLLHKNDCLTVTSNGLVFVKSKIRKSILAKM 1003
Query: 1359 LEEILSTRIMVKQAIKKLAPSQQ-ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
L+EIL+ RI +K ++ + + + ++FN+RQ ALKLIANVTYGY +A FSGRMP ++
Sbjct: 1004 LQEILTLRINIKSFLQLINQDENPQMVKVFNSRQTALKLIANVTYGYASASFSGRMPNSD 1063
Query: 1418 LADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
+AD+IV GR L +I + ++E + KV+YGDTD V +
Sbjct: 1064 VADAIVATGREILTASIDIIEKSE-FGCKVVYGDTDSLFVYL 1104
Score = 44.3 bits (103), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 70/178 (39%), Gaps = 27/178 (15%)
Query: 13 VRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYG-------STPAGQKTCLHIHR 65
+++ + D Y + P C SL+ +V +VPVIRVYG S G LHIH
Sbjct: 8 IQVNNYDSYQSLPS-----CLDSLEL-QVAQVPVIRVYGALVFIHNSVKYGYNALLHIHN 61
Query: 66 ALPYLYVPCADIPVQLRQEDDGYMHAIS-----LALEKALKVKGSAGSKRQHVHECSLVR 120
PY+YV C V+ E H S +A K K Q +E + +
Sbjct: 62 VYPYVYVSCDYEFVKSLPEITHLGHVTSYLEAFMAASAWQKKKQPEEEDEQQSNELDITQ 121
Query: 121 AKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDAFFPRKFN 178
K G F + L + + Y Y +G+ K+ F P+ A F FN
Sbjct: 122 LKSGKRRFIAKVS--------LCKGVPIYG-YRVGYRLFYKINFLSPLYKARFTNLFN 170
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 128 FDKS---LQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPV 168
F KS + +ESHIP+L QFL DYNL+ L+ +R+PV
Sbjct: 179 FSKSKFKFEIYESHIPYLSQFLSDYNLFSCNWLNFKNCYYRYPV 222
>gi|68478723|ref|XP_716630.1| DNA polymerase zeta subunit fragment [Candida albicans SC5314]
gi|46438302|gb|EAK97635.1| DNA polymerase zeta subunit fragment [Candida albicans SC5314]
Length = 1261
Score = 302 bits (773), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 238/415 (57%), Gaps = 38/415 (9%)
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLES 1081
+ E+ + + + ++ FDPDIL G+++ S G++ ER GI +++D+SR +S
Sbjct: 876 IFDDELKMITKLVTLVELFDPDILSGYEVNSMSWGYIVERLRDVFGINIMSDLSRGSFKS 935
Query: 1082 KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRL 1141
GD WG TH S + + GR +LNVWR
Sbjct: 936 NGKFGD-------------------------------RWGYTHTSNIEISGRHMLNVWRP 964
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
+R E+ L Y++E V +L + +P L++W G + + + Y + R + L+
Sbjct: 965 LRSELSLTSYSLENVTYHLLHKSLPRYSNYRLSEWLKEGTFSSIFAVLSYYINRIDIVLK 1024
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQ 1261
I+N ++I R E +R+ GI+F S RGSQY+VES+L R+ ++ L SP QV
Sbjct: 1025 IINVQELITRNVEHSRLIGIEFNSNFYRGSQYKVESILARICKPESLLLNSPSKQQVHEM 1084
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI---LPSKENTLG 1318
+EC+PL++EP+S FY P+VVLDFQSLYPS+MIAYN C+ T +GK+ P+K N
Sbjct: 1085 RPIECIPLILEPKSNFYKSPLVVLDFQSLYPSIMIAYNYCYSTLVGKLHNYRPTKNNIGY 1144
Query: 1319 VSSFRPDLHVLRDLK--DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ + + ++ L+ D I PNG ++V +RK VL ++LEEILS RI +KQ +K
Sbjct: 1145 LRNLKIPYGLVNLLQREDGFNISPNGFVFVKSHIRKSVLAKMLEEILSIRIKIKQVMKLF 1204
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+ L +++N+RQLALKLIANVTYGYT+A FSGRMP +++AD+IV GR +
Sbjct: 1205 KEDAE-LTKLYNSRQLALKLIANVTYGYTSATFSGRMPNSDIADAIVSTGREIFQ 1258
Score = 43.5 bits (101), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 14/108 (12%)
Query: 74 CADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFD-KSL 132
C +P+ Q + + ISL L K + + + + + KK ++ +
Sbjct: 177 CKGVPIYGFQLGYRFFYKISL-LSPLYKSRLAKLFQENTISLFRIGMEKKKNVTYNPEPA 235
Query: 133 QPHESHIPFLLQFLVDYNLYGMGHLHLSK------------LKFRHPV 168
+E+HIP+LLQFL DYNL+G G +++ K L FR P+
Sbjct: 236 YVYEAHIPYLLQFLTDYNLFGCGWVNIDKDFVSQEDAKTRGLYFRSPI 283
>gi|170575674|ref|XP_001893336.1| DNA polymerase family B containing protein [Brugia malayi]
gi|158600728|gb|EDP37834.1| DNA polymerase family B containing protein [Brugia malayi]
Length = 1385
Score = 300 bits (769), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/340 (49%), Positives = 223/340 (65%), Gaps = 17/340 (5%)
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GRI++NVWR++R EV L YT+ V +VL+R+ P F L++W SG +++
Sbjct: 735 GRILINVWRILRHEVALRNYTISNVVNSVLKRRFPHYSFSTLSEWILSGERDLIALVLKH 794
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA- 1250
+ +LNL I+ +LD RTSE+AR++GI F VL+RGSQ+RVESMLLRLA + Y+A
Sbjct: 795 MKLYCQLNLLILLRLDFFTRTSEMARLYGIQFNEVLTRGSQFRVESMLLRLARRERYVAP 854
Query: 1251 -ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
ISP Q P E LPL MEPESGFY DPV+VLDFQSLYPS++IAYN CF TC GK+
Sbjct: 855 SISPVQRQAMCSP--ETLPLTMEPESGFYRDPVIVLDFQSLYPSVIIAYNYCFTTCFGKV 912
Query: 1310 LPSKENTL---------GVSSFRPDLHVLRDL-KDELLIPPNGVMYVPPKVRKGVLPRLL 1359
EN G+ P ++ L ++L I P G ++ V+KG++P +L
Sbjct: 913 -SHVENICTADKIIEFGGLEYNCPIDDIVSMLTTNKLHISPTGAIFCRKNVQKGLMPVML 971
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
EEIL+TR+MVK+A K+ ++ L RI ARQ+ALKLIANVTYGY+AA FSGRMPC E+A
Sbjct: 972 EEILNTRVMVKKAAKECKNDRR-LARILEARQMALKLIANVTYGYSAANFSGRMPCVEVA 1030
Query: 1420 DSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDR-YTVC 1458
D+IV GR TLE+A+ V ++VIYGDTD + VC
Sbjct: 1031 DAIVGKGRETLERAMKLVGSGAYGNSRVIYGDTDSMFVVC 1070
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 41/186 (22%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
SVR V+ D+Y+ P G++ + +VP+IR++G GQK C+H+H PY+
Sbjct: 4 LSVRNVTCDYYLEKP-NGFN----KIHLRTNVKVPIIRMFGILQTGQKCCVHVHGVFPYI 58
Query: 71 YVP--------------------CADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKR 110
+ +D +L+ + +H I K++ + G +
Sbjct: 59 VIQTTVQFTPEFASLLRNRISSIVSDYNPRLKFNVNFAIHEI-----KSITARSLYGYHK 113
Query: 111 QHVHECSLV-----------RAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHL 159
+ + ++ A + A + Q +E+HIP++LQF +D++++GM ++
Sbjct: 114 NNENFVQILCYNPLQLRIIADALQKEARKNSIFQVYEAHIPYVLQFFIDHSIFGMDMVNF 173
Query: 160 SKLKFR 165
S +KFR
Sbjct: 174 SSVKFR 179
>gi|145477337|ref|XP_001424691.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391757|emb|CAK57293.1| unnamed protein product [Paramecium tetraurelia]
Length = 1544
Score = 299 bits (766), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 188/572 (32%), Positives = 295/572 (51%), Gaps = 61/572 (10%)
Query: 937 PTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAV 996
PTPLS + D E L L+ E+ + L PDP D I+ + L N +
Sbjct: 639 PTPLSILSEDD---ITFQEDLVLMIFEIFSYKDSKLLPDPEKDEISFIILHSYNVKSSKI 695
Query: 997 EIYVLLYCKSESHQRSLVGI-------PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGW 1049
+L+ E++ +++ G + + + EI+L F I+ DPD + G+
Sbjct: 696 MNKMLIIQNEENYLKAVNGYFERMNAPVEYTIVLTQNEINLMKAFTLIVHLIDPDFISGY 755
Query: 1050 DIQGGSLGFLAERAAHLGIGLLNDISR-TPLESKIAA-----------GDSE-ISER--G 1094
D++ SL ++A RA +G L +ISR P K+ G + I+E+
Sbjct: 756 DLETRSLYYVANRAEFIGYDFLTEISRGQPTYDKLIEIFDIDEILFNFGQPQPINEKLQK 815
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG----------------LHVGGRIVLNV 1138
D + P ++ K + +D +++ S V GR+++NV
Sbjct: 816 YMDYRMQRPTASK----KQSFNQDAKTKSYNSKGKLNQINSRRKKLRFITFVVGRVLINV 871
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
WR + ++K+ Y++E V + ++K I + L++WF S + +Y R +
Sbjct: 872 WRNVATDIKIIDYSIENVYFQMFKQKNALIHNQTLSQWFKSET----FLVFQYYAKRINM 927
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
+I+ + +I RT E+A++FG ++ SV RGSQ+++ES+L R+ +YL +S QV
Sbjct: 928 TFDILEMIGLIPRTIEIAKLFGCEYESVGFRGSQFKIESILNRVTKLNDYLLLSATRVQV 987
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE---- 1314
++Q +EC+PLV+EP F DP++VLDFQSLYPS+MIAYNLCF TCLG I +
Sbjct: 988 STQKILECMPLVVEPPKIFTVDPLIVLDFQSLYPSIMIAYNLCFSTCLGSIKEEFQEGGK 1047
Query: 1315 NTLGVSSFRPDLHVL-------RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
GV + D L +L +LI PN V ++ VR G++P++L E L TRI
Sbjct: 1048 KRFGVVATDIDFESLLQKYQNQEELMKHILITPNNVAFLTKDVRVGIIPQILNEFLMTRI 1107
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
M+K++ L + + RQLA+KL NV YGY A FSGRMP ++ADS+V+ GR
Sbjct: 1108 MIKKST-SLYDKHPKIQKQHGFRQLAIKLFMNVMYGYCGASFSGRMPSGDIADSVVELGR 1166
Query: 1428 STLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
+ L + I +N N W+AKV+YGDTD V +
Sbjct: 1167 TILNQCIECINTNPAWQAKVLYGDTDSLFVML 1198
Score = 53.9 bits (128), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 49/163 (30%)
Query: 45 PVIRVYGSTP-AGQKTCLHIHRALPYLYVPCADI-------------------------- 77
PVIR++G P ++ C+H+H PY Y+ ++
Sbjct: 38 PVIRLFGYEPKTKERMCVHVHGYFPYFYIKVDELRHLFTDLDFVKDFINKVHQVYASTFL 97
Query: 78 ---------------PVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAK 122
+L Q+ D Y ++K L +K K+ + LV
Sbjct: 98 AHYPKKSQEKFKIIYQYELCQKLDFY----GFHMQKQLFLKLFMYDKQ---YMSQLVMLL 150
Query: 123 KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
GA+ + Q +ESH+ + + F D NL+GM + + KLK+R
Sbjct: 151 ASGAIMNYKFQSYESHLTYFMHFYSDANLFGMSQIKILKLKYR 193
>gi|255592471|ref|XP_002535702.1| hypothetical protein RCOM_2112970 [Ricinus communis]
gi|223522232|gb|EEF26681.1| hypothetical protein RCOM_2112970 [Ricinus communis]
Length = 459
Score = 295 bits (754), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 204/478 (42%), Positives = 265/478 (55%), Gaps = 55/478 (11%)
Query: 272 MVQSLVPIWEVCSHPIYKLFNIQYIYPLVNFTTFQEEYERTGINEAVMAPDPGKPRPQDV 331
MVQSL+PIWE EEYERTG+ EA + PDPGKP +DV
Sbjct: 1 MVQSLIPIWE-------------------------EEYERTGVYEAAIPPDPGKPLAEDV 35
Query: 332 LRTLSLGLEFENVLMEMCGEGQETVSSFGNDFEVLKSVACATDEENLIKLGPANYDYKDP 391
L+TL LEFE L E+C E +E +S GN+ + + +TDEE L++ N +Y +
Sbjct: 36 LKTLLHDLEFERTLAELCSESEENLSLVGNNVKSQPELTSSTDEEILVE--DRNINYNNA 93
Query: 392 E-YLTCLKEGKILSALA-PQGLVHQEKISLMPSKGKDTCPELPFGGEIHSSEMVGAPGQK 449
E L C E I+ A + PQ L +E + + KD C E+ F ++ SS +G
Sbjct: 94 EVLLKCSTERDIIGASSLPQSL-GEEGVDTTAGR-KDACQEMSFANDVVSSGTIGT---- 147
Query: 450 EPLIFGIDIPQATDTEALGLLKWLATSQAAEDLNSDDELLHETILSPLLPETTIDKVLEK 509
+D P+A D EALGLL+WLATSQAAED+NSDDEL+ ETILSPLL + TI+KVLEK
Sbjct: 148 ------LD-PKAADKEALGLLRWLATSQAAEDINSDDELVRETILSPLL-QATIEKVLEK 199
Query: 510 ANTDYERESQKECQDILDSIEDEVNVDGLEERNSSTVDPSNHPETSSHKKIPQIDGSSDD 569
AN DYE ESQKECQDILDSIED +++G +E+ + D S H ++SS + + D
Sbjct: 200 ANMDYESESQKECQDILDSIEDLFDLEGSKEKACHSSDRSIHSQSSS-------ETAQGD 252
Query: 570 LYLLPCSGSSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKCNVKKKLWGSLPFSVSEQF 629
L + SS NSS EIK ES R F+HQV Q T +K KK LWGSLP S++E+
Sbjct: 253 ALLSSIAKSSRNSSGIEIKDESKRKFRHQVLQTAGTCTTNKRKRKKLLWGSLPISMTEKE 312
Query: 630 NKDIETVSCNISSLCVTEVKDHGATGSLVGNELGKSFDALEREDADAHDIKEATAVTGGS 689
N D E NI V EVK + S+ GNE S D ++ I E + G S
Sbjct: 313 NDDSEAGGSNIDKAHVCEVKIY-CRRSIEGNEREYSDDLMKN---SGTGICEVGGLVGSS 368
Query: 690 VRDLMRRKRSYR-ESSECEPPRVKRVNVTGEQKNALSMCEKQLEFDTLQNDECEKCPL 746
VRDLMRRKR R + P K+V GE + + +QL+F D+ + PL
Sbjct: 369 VRDLMRRKRCRRIPQQDDNPDGAKKVCSRGEHEQGKVLLPEQLDFLARHGDKHDGKPL 426
>gi|147800370|emb|CAN70929.1| hypothetical protein VITISV_000386 [Vitis vinifera]
Length = 505
Score = 291 bits (745), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 191/489 (39%), Positives = 243/489 (49%), Gaps = 118/489 (24%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQ----------------------- 37
M +SQ D+ IFSVRIVS+D+YMA PIP DICYSS Q
Sbjct: 1 MENSQDDAKIFSVRIVSMDYYMASPIPDLDICYSSFQELELESTWLVRKRKWRVEFEKSR 60
Query: 38 --GGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLA 95
GG V EVPVIR+YGSTP GQKTCLH+HRALPYLYVPC D+ Q QE D Y HA+SL
Sbjct: 61 AEGGMVKEVPVIRIYGSTPVGQKTCLHVHRALPYLYVPCTDLMPQSPQEADTYTHAVSLG 120
Query: 96 LEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMG 155
+EKALK +DYNLYGMG
Sbjct: 121 VEKALK---------------------------------------------IDYNLYGMG 135
Query: 156 HLHLSKLKFRHPVPDAFFPRKFNYSSKQASA--DFQVIGCGSYPMHLMGHQIKTLSGLNI 213
HLHLSK+KFRHPVPD F RK NY+ +Q DF I HL + L+
Sbjct: 136 HLHLSKMKFRHPVPDVFSSRKVNYNGQQKPEPDDFACISA-----HLQADSSGD-TCLSS 189
Query: 214 KVFLSLKEMLQWMVCLIH----------CSATDIFASSIFLYDDC-VGDIVNQRLMMYTS 262
V++S WM CS S+ L D V +I+NQ+ +Y+S
Sbjct: 190 PVWISSTIPGGWMWQFSSQLDASPGQGICSPKR--QSTCELEGDAIVEEILNQQFKLYSS 247
Query: 263 LSQTRSDVKMVQSLVPIWEVCSHPIYKLFNIQYIYPLVNFTTFQEEYERTGINEAVMAPD 322
LSQT SDVKMV+SL+PIWE EE+ERTG++E M PD
Sbjct: 248 LSQTHSDVKMVRSLIPIWE-------------------------EEFERTGMHEVAMPPD 282
Query: 323 PGKPRPQDVLRTLSLGLEFENVLMEMCGEGQETV--SSFGNDFEVLKSVACATDEENLIK 380
PGKP P+DVLR+LS GLEFEN L E+C + +++ + D ++S+ + DE NL+
Sbjct: 283 PGKPLPEDVLRSLSHGLEFENKLGELCNQAGDSLAFTPLEKDERFMQSITSSADERNLVG 342
Query: 381 LGPANYDYKDPEYLTCLKEGKILSALAPQGLVHQEKISLMPSKGKDTCPELPFGGEIHSS 440
+ + D E C K+ + QG + +E +PS+G+ C + E S
Sbjct: 343 DVLVSPNENDGEPSKCFKDQNKNISPVSQGSLCEEDDDAIPSEGRGMCLQQLSVDERQRS 402
Query: 441 EMVGAPGQK 449
E +G G K
Sbjct: 403 ENIGPSGLK 411
>gi|444319010|ref|XP_004180162.1| hypothetical protein TBLA_0D01350 [Tetrapisispora blattae CBS 6284]
gi|387513204|emb|CCH60643.1| hypothetical protein TBLA_0D01350 [Tetrapisispora blattae CBS 6284]
Length = 1352
Score = 290 bits (742), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 187/514 (36%), Positives = 267/514 (51%), Gaps = 80/514 (15%)
Query: 958 TLLSIEVQAESRGDLRPDPRYDSINVVALAFENDS-----DHAVEIYVLLYCKSESHQRS 1012
T S+E A S DP+ D + V + DS E +++ + Q
Sbjct: 554 THFSMECFATSSIGKLSDPQKDEVKFVIWQLDADSYPLSLGTCHEGILVVGHSTLERQLK 613
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-AHLGIGLL 1071
+ +V E LF + ++ FDPDIL G++IQ GS G++ ER A L
Sbjct: 614 YFDLGGLRVAAYDSENDLFDALMDLVLLFDPDILSGYEIQNGSWGYVMERCRAIYKYELA 673
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+++SR I A ++ +R E E ++V
Sbjct: 674 DELSR------IKASSNKYFKR-----------------------EGE--------INVV 696
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR V N+WR MR E++L YTVE VA VL ++IP L + + R ++Y
Sbjct: 697 GRYVFNIWRHMRHEIRLTSYTVENVAYEVLGQRIPRYSQDTLNEMWFDKSIRQVATLLKY 756
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
V R K+N++++ +I R +E AR+ GIDF SV RGSQY+VES L R+ +N+L
Sbjct: 757 WVVRLKINVKLLIHFQLIPRITEQARLVGIDFRSVYHRGSQYKVESFLTRITKNENFLLF 816
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
SP QV +Q A+EC+PLVMEPES +Y PV+VLDFQSLYPS++ YN C+ T L
Sbjct: 817 SPSRSQVRAQKALECIPLVMEPESSYYQSPVLVLDFQSLYPSIICGYNYCYSTML----- 871
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ N L V S + PNGV +V +R+ +L R+L+E+L+ R+MVK
Sbjct: 872 DENNRLDVRSKN--------------VSPNGVEFVNTTIRESILGRMLQELLACRVMVKS 917
Query: 1372 AIKKL---------APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
+L A +Q + +Q ALKL+ANVTYGY AA FSGRMPC+ +ADS+
Sbjct: 918 TRNELRTHGGEAINAAAQ------LDGQQQALKLLANVTYGYAAASFSGRMPCSLVADSV 971
Query: 1423 VQCGRSTLEKAISFVNENE---KWKAKVIYGDTD 1453
V+ GR L AI+ + E+E +W A+V+YGDTD
Sbjct: 972 VETGREVLRSAIALIGESENVKRWGARVVYGDTD 1005
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 38/190 (20%)
Query: 13 VRIVSIDHYMAPPIPGYDICYS-SLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLY 71
+++ + D YM P D+ + SL K +++P+IRV+G +G + HIH PY +
Sbjct: 16 IQLNNYDWYMDRP-SRLDVSHGDSLPMNKFDQIPIIRVFGKLLSGHQVLCHIHGVFPYFF 74
Query: 72 VP---------------CADIPVQL-------RQEDDGYMHAISLALEKALKVKG----- 104
VP CA + L + + + + ++++ KA++ G
Sbjct: 75 VPYNGEISDSSVVMNQKCAQLHKVLERRSLNGKNDSNNLKNVANVSIVKAIRFYGYHKDW 134
Query: 105 ------SAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
S + C L R G +F KS+ ESHIP+LLQF DYNL+G +
Sbjct: 135 ELFYKISFLNVSVMTQVCELFRE---GKIFKKSVDTFESHIPYLLQFSCDYNLFGCHWMS 191
Query: 159 LSKLKFRHPV 168
L K FR PV
Sbjct: 192 LEKCYFRDPV 201
>gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 2315
Score = 290 bits (741), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 276/559 (49%), Gaps = 48/559 (8%)
Query: 946 QDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCK 1005
Q+ E +T+ + E+ A+S D+ PDP D IN + EN ++L +
Sbjct: 852 QNKKLTQYHEDITMYTFEIFAKSTPDMLPDPSSDPINFIVFDLENFKRTQG---IILVDE 908
Query: 1006 SESHQ-----RSLVGIPDC---KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLG 1057
H+ R G D + V E L FIK + F+ DI+ GWDI+ SL
Sbjct: 909 INCHEPIDKVRKYYGFNDSMFKTIIVTKNEEELLLTFIKQIHIFNVDIITGWDIEKKSLF 968
Query: 1058 FLAERAAHLGIGLLNDISRTPLES-----KIAAGDSEISERGITDNMLAEPVVAESLLAK 1112
+ + R LGI +++ +SR P S D I E+ D+ + S +
Sbjct: 969 YFSHRCWQLGIDVMDILSRCPKNSFNILRAFKLADCLIEEQFQNDSAKGYSQQSMSFDSN 1028
Query: 1113 DA-----IIEDEWGRTHASG------------LHVGGRIVLNVWRLMRGEVKLNMYTVEA 1155
+ + ++H S + GR+++N WRL++ + KL Y +E+
Sbjct: 1029 QSFKLQNVAMQSIKQSHRSAKQTGFFANFKLNFEIAGRMIINTWRLVKHDYKLFCYELES 1088
Query: 1156 VAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSEL 1215
V V + +IP LT+ + + R EY++ R +I++ + +IN +E
Sbjct: 1089 VVNYVFQERIPIFSNWSLTQMYNHEDIKQRVFVFEYMMKRLMKTKDIIDHIQIINTCAEE 1148
Query: 1216 ARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPES 1275
+++G DF S + +G Q+R+E ++ R+ Y +S + V +Q +EC PL +EP
Sbjct: 1149 TKLYGFDFQSAICKGHQFRIEHIMNRVTDLLGYKLMSASRYGVQTQRMLECSPLTLEPPK 1208
Query: 1276 GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE----NTLGVSS---------F 1322
FY DPV+VLDF SLYPS+MIAYNLCF TCLG I + + LGV
Sbjct: 1209 LFYVDPVIVLDFISLYPSIMIAYNLCFSTCLGYIDDNFQKGGFKKLGVQKQWDVQFEELL 1268
Query: 1323 RPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA--PSQ 1380
+ + + +L ++ + PN V +V VR+GVL ++ E TR +K + K P
Sbjct: 1269 KKHNYDIDELMKDIFVAPNKVAFVKKSVREGVLSQITHEFFFTRQFIKGNMGKYKQNPLY 1328
Query: 1381 QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN 1440
++ RQ +LKL V +GYT A FSGRMP +LADSI+Q G+ L +AI+ +N +
Sbjct: 1329 NHIYNKLQQRQKSLKLFMCVIFGYTGATFSGRMPLGDLADSIIQIGKFLLNQAINLINNS 1388
Query: 1441 EKWKAKVIYGDTDRYTVCI 1459
+KW A+VIYGDTD V I
Sbjct: 1389 KKWGAQVIYGDTDSVFVNI 1407
>gi|308497790|ref|XP_003111082.1| hypothetical protein CRE_04525 [Caenorhabditis remanei]
gi|308242962|gb|EFO86914.1| hypothetical protein CRE_04525 [Caenorhabditis remanei]
Length = 1337
Score = 288 bits (737), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 203/571 (35%), Positives = 294/571 (51%), Gaps = 89/571 (15%)
Query: 928 ISGPDGRSKPTP----LSQIGFQDPASA-GAGEQ----LTLLSIEVQAESRGDLRPDPRY 978
+ P S+P LSQ +P+S+ +GE L + S+E+ +++ + P+ +
Sbjct: 505 VVAPAEHSQPLEQTKLLSQTSVDEPSSSEKSGESDIVGLCVASLELLVDTKMPM-PNFVF 563
Query: 979 DSINVVALAFENDSDHAVEIYVLLYCKSES--HQRSLVGIP------DCKVFVCSKEIHL 1030
D I V+LA +D C+ S Q L IP D +V C E+ +
Sbjct: 564 DPIVSVSLAIYDD-----------VCRESSPKLQVLLTNIPNGPSHFDRRVVFCETELEM 612
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR-TPLESKIAAGDSE 1089
+K + FD D+L+G++ S G+ R +G L D ++ P E + E
Sbjct: 613 LEEVVKYVVQFDVDVLVGYETLCLSWGYFLRRIKIIGTDLSMDRTKPEPFEEGQQKNEDE 672
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
IS + P GR++++VW+++R ++KL
Sbjct: 673 IS--------VVPP---------------------------KGRLLVSVWKVVRSDLKLR 697
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
Y + VLRRKIP I L K R +++ + +N+ ++ +++
Sbjct: 698 NYDLGNAVANVLRRKIPMIDNCTLMKRIRGNRSTVRNDVFLHLLKLSSVNISLLIEMNWF 757
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS----PGNHQVASQPAME 1265
+ +E+ARV+GI F V +RGSQ RVESMLLRLAH N++A S N + + E
Sbjct: 758 LKNAEMARVYGIQFHEVWTRGSQLRVESMLLRLAHRMNFVAPSITHLQRNIHLFRMGSPE 817
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP----------SKEN 1315
L L++EP+S Y DPV+VLDFQSLYPSM+IAYN C+ T LGKI +E
Sbjct: 818 QLQLILEPQSKVYFDPVIVLDFQSLYPSMVIAYNYCYSTILGKIANLVQMSNETKNREEI 877
Query: 1316 TLGVSSFRP---DLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEE----ILSTRIM 1368
LG + P DL L K E+ P M+V + R+GVLP LL E IL+ RIM
Sbjct: 878 ILGAIKYLPSKDDLVKLVAYK-EVTASPLASMFVKKEKREGVLPLLLREVASSILAARIM 936
Query: 1369 VKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
VK ++K++ + L RI +ARQLALKL+ANV+YGYTAA +SGRMPCAELAD+I+ GR
Sbjct: 937 VKNSMKRIKSKK--LKRILDARQLALKLVANVSYGYTAANWSGRMPCAELADAILGKGRE 994
Query: 1429 TLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
TLE+AI V E ++VIYGDTD V +
Sbjct: 995 TLERAIEMVQRGEYGGSEVIYGDTDSMFVLV 1025
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 45/190 (23%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
F +R +H P P +I K N++PV +YG T +GQK CLH+H LPYL
Sbjct: 3 FCIRNFVCEHSQEVPGPMDNIF-----SFKKNKIPVFHIYGVTDSGQKACLHVHGVLPYL 57
Query: 71 YVPCADIPVQLRQEDDGYMHA-ISLALEKALKVKGSAGSKRQH----VHECSLVRAKK-- 123
+ +L M A I+ +EK +++ S G+ +++ V++ ++
Sbjct: 58 VLRVGG---KLTPTVVAAMKAKINKGIEK--EIETSTGNTKKYNADYVYKMETFSSRSLY 112
Query: 124 ---------------------------GGAVFDKSL-QPHESHIPFLLQFLVDYNLYGMG 155
G V DK L QP+E+H+PF LQF +D +++GM
Sbjct: 113 GYQDEEEYFVRVYFSSPWYLQKATHSLGKEVVDKPLFQPYEAHLPFHLQFFIDNSIFGMD 172
Query: 156 HLHLSKLKFR 165
++HL+++KFR
Sbjct: 173 NIHLNQVKFR 182
>gi|62088092|dbj|BAD92493.1| REV3-like, catalytic subunit of DNA polymerase zeta variant [Homo
sapiens]
Length = 750
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 245/443 (55%), Gaps = 46/443 (10%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 323 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 382
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 383 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 442
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L I L ISR P
Sbjct: 443 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP-------- 494
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R + DE+G S +++ GRI LN+WR+MR EV
Sbjct: 495 DDKIENRFAAE-------------------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 535
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 536 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 595
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D+I +TSE+AR+FGI F VL+RGSQYRVESM+LR+A NY+ ++P Q + A +C
Sbjct: 596 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 655
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR 1323
+PL+MEPES FY++ V+VLDFQSLYPS++IAYN CF TCLG + E G +S R
Sbjct: 656 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 715
Query: 1324 PDLHVLRDLKDELLIPPNGVMYV 1346
+L ++ ++ + PNGV +V
Sbjct: 716 VPPDLLYQVRHDITVSPNGVAFV 738
>gi|149582152|ref|XP_001517555.1| PREDICTED: DNA polymerase zeta catalytic subunit-like, partial
[Ornithorhynchus anatinus]
Length = 434
Score = 287 bits (735), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/314 (48%), Positives = 205/314 (65%), Gaps = 16/314 (5%)
Query: 1109 LLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSI 1168
++ KD I ++ R H+ L G L EV L YT E V VL ++ P
Sbjct: 132 VIDKDRTISNQDKRNHSPLLTRSGITGL--------EVALTNYTFENVGFHVLHQRFPLF 183
Query: 1169 PFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLS 1228
FR+L+ WF + R++ V++ V R + NL+++ QLD+I +TSE+AR+FGI F VL+
Sbjct: 184 TFRILSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDIIGKTSEMARLFGIQFLHVLT 243
Query: 1229 RGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQ 1288
RGSQYRVESM+LR+A NY+ ++P Q + A +C+PL+MEPES FY++ V+VLDFQ
Sbjct: 244 RGSQYRVESMMLRVAKPLNYIPVTPSAQQRSRMRAPQCIPLIMEPESRFYSNSVLVLDFQ 303
Query: 1289 SLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFR--PDLHVLRDLKDELLIPPNGV 1343
SLYPS++IAYN CF TCLG + E G +S R PDL L ++ ++ + PNGV
Sbjct: 304 SLYPSIVIAYNYCFSTCLGHVENLGKFDEFKFGCTSLRVPPDL--LYQIRHDITVSPNGV 361
Query: 1344 MYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYG 1403
+V P VRKGVLP++LEEIL TRIMVKQ++K + L R+ ARQ+ LKLIANVT+G
Sbjct: 362 AFVKPSVRKGVLPKMLEEILKTRIMVKQSMKSYK-HDRALSRMLEARQMGLKLIANVTFG 420
Query: 1404 YTAAGFSGRMPCAE 1417
YT A +SGRMPC E
Sbjct: 421 YTTANYSGRMPCIE 434
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 28/120 (23%)
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+DPDIL+G++IQ S G+L +RAA L + L ISR P + K +N
Sbjct: 1 YDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVPDDKK--------------ENRF 46
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVK-LNMYTVEAVAET 1159
A AE DE+G S +++ GRI LN+WR+MR EV+ L + +VE A T
Sbjct: 47 A----AE---------RDEYGSDTMSEINIVGRITLNLWRIMRNEVQNLTLISVELHART 93
>gi|340507728|gb|EGR33649.1| hypothetical protein IMG5_047210 [Ichthyophthirius multifiliis]
Length = 1612
Score = 285 bits (730), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/572 (30%), Positives = 290/572 (50%), Gaps = 75/572 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+T++ +E A+S P+P+ D I ++ + +N + + + K + +
Sbjct: 684 ITVMFLECFAKSFPKKLPNPQNDQIFLIIFSVQNQKHNFQQKKIKNVKKQYLYIYIEINE 743
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLG--------- 1067
++ + E L I I+ DPDIL GWD + SLG++ +R LG
Sbjct: 744 SISEILIVRSETDLIKLLILIVQKIDPDILCGWDTEQQSLGYIIQRCETLGIQISDYLSR 803
Query: 1068 -----IGLLNDISRTPLESK------------------------------IAAGDSEISE 1092
I LLN + ++ S+ + ++E +
Sbjct: 804 CPSNIIDLLNVLQQSEFLSQNQKEQIFSNQNLSISNSINSLDNSSNAINSSSNDENEENL 863
Query: 1093 RGITDNMLAEPVVAESLLAKDA------IIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
N L + + L ++ II ++ +T ++ GR++LN WR+ + E
Sbjct: 864 SKFQSNKLVKQKQVDFLQKSNSQNSIGGIINPKY-KTQNDNTNIKGRMILNTWRVAKEEF 922
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
K Y ++ V + K P L+ WF + + + Y + R + +I+ ++
Sbjct: 923 KFTNYDLQNVYYELFGIKNPVFSNSKLSFWFNM---QEKSIVLNYFLNRVQCIQQILEKM 979
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMEC 1266
D I RT+ AR++G DF S+L+RG+Q+ VE +L R+ +L +S QV++Q +EC
Sbjct: 980 DTIQRTTASARLYGCDFESILTRGTQFIVEGVLNRVCKQIGFLLLSASKQQVSAQKILEC 1039
Query: 1267 LPLVMEPESGFYAD--------------PVVVLDFQSLYPSMMIAYNLCFCTCLGKI--L 1310
PLV++P+ FY + P++VLDFQSLYPS++IAYN C+ TCLG I L
Sbjct: 1040 TPLVLQPQKSFYVEQQQYQYLYIYFFKSPIIVLDFQSLYPSIIIAYNYCYSTCLGNINEL 1099
Query: 1311 PSKE--NTLGV-SSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
++E LGV ++ L+ L+ ++++L I PN V +V VR+GVLP++L E L +RI
Sbjct: 1100 YTEEGKKRLGVIRNYDFQLNSLKQIEEKLFISPNEVAFVKKSVRQGVLPQILHEFLLSRI 1159
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
M+K++ K ++ I ++ ARQ ++K NV YGY A FSGRMPC +LADSIV G+
Sbjct: 1160 MIKESAKYYKKNEYI-SKLLQARQQSIKNFMNVVYGYAGASFSGRMPCNDLADSIVDTGK 1218
Query: 1428 STLEKAISFVNENEKWKAKVIYGDTDR-YTVC 1458
L++ I +N N KW AKV+YGDTD + +C
Sbjct: 1219 YILQEVIRKINSNSKWNAKVVYGDTDSVFVIC 1250
Score = 44.7 bits (104), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 34 SSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAIS 93
++ +G K+ +VP+IR++G+ GQK CL+IH+ C + S
Sbjct: 26 TNYKGNKIKQVPIIRLFGANKYGQKCCLNIHKVQLLFIQICFNFQ----------QKVFS 75
Query: 94 LALEKALKVKGSAGSKR 110
L L + K + + G K+
Sbjct: 76 LFLYQIRKFRRNIGKKQ 92
>gi|118369112|ref|XP_001017761.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
gi|89299528|gb|EAR97516.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 1907
Score = 285 bits (729), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 207/348 (59%), Gaps = 24/348 (6%)
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GRI+ N+WRL R ++KL + E V + + + P LTKWF S + + +Y
Sbjct: 1230 GRIIWNIWRLCRDKLKLTNFDAENVYYELFQIRNPVYSNWTLTKWFNSESAKHKTLVFDY 1289
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ K+N ++++LD+I RT+ AR++G DF S+++RGSQ+RVE +L+R+ YL +
Sbjct: 1290 YFNKLKINQIVLDKLDIIQRTTSSARLYGCDFESIITRGSQFRVEGVLVRVTKQYGYLML 1349
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
S QVASQ +EC+PLVMEP + DPV+V+DFQSLYPS+MIAYN C+ TCLG I
Sbjct: 1350 SASRMQVASQKILECMPLVMEPPKMLFVDPVIVMDFQSLYPSVMIAYNYCYSTCLGNINE 1409
Query: 1312 SKEN----TLGVSSFRPDLHV----------------LRDLKDELLIPPNGVMYVPPKVR 1351
N LGV+ D H+ + ++ I PN V YV +R
Sbjct: 1410 QFNNGGSGRLGVNQ---DAHLKFEQLFGKDRKFNPKDMDQYHQDIFIAPNKVAYVRKTIR 1466
Query: 1352 KGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSG 1411
+G+LP++L E L TRIM+K++ + L ++ +A+Q ++KL V YGYT A FSG
Sbjct: 1467 EGILPQILHEFLLTRIMIKKS-AGFYKDDKYLSKLLDAQQQSIKLFMCVVYGYTGASFSG 1525
Query: 1412 RMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
RMP ++ADSIV+ GR L + ++N N+ W AKV+YGDTD V +
Sbjct: 1526 RMPSVDIADSIVETGRYLLNQVCEYINSNKDWYAKVVYGDTDSVFVLL 1573
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+TL+ +E+ A S P+P DS++ + + N Y + Q++
Sbjct: 831 ITLMLVEIFARSSPHKLPNPATDSVDALFFSIYNGKFDVSPRYF-----NSEEQKAKTNE 885
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ V E L FI I DPDI GWD++ SL +L +R LGI L +SR
Sbjct: 886 NISEIIVVENEEDLIQVFIIITQKIDPDIFGGWDMEKSSLNYLGQRCQILGIQLFELLSR 945
Query: 1077 TP 1078
P
Sbjct: 946 CP 947
>gi|298715260|emb|CBJ27909.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 3112
Score = 285 bits (729), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/296 (47%), Positives = 189/296 (63%), Gaps = 28/296 (9%)
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESK 1082
VCS+E +F + + C DPD ++GW++QG SLG++ ER G+ + + T L S+
Sbjct: 2188 VCSEE-QVFRALVGVFCRHDPDFVVGWEVQGDSLGYVVER----GLNMEPSMDMTRLLSR 2242
Query: 1083 IAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLM 1142
D++ DEWG+TH SG+ + GR VLN+WRLM
Sbjct: 2243 TPGRDADKRN-----------------------ARDEWGKTHGSGIWLTGRTVLNMWRLM 2279
Query: 1143 RGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEI 1202
R E+KL YT+++VAE VLR++IPS ++ ++WFA AR R + +GRA L I
Sbjct: 2280 RSELKLCSYTLQSVAEHVLRKRIPSFSLQLRSRWFAGRNVAARSRALADPLGRATACLSI 2339
Query: 1203 MNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQP 1262
M++LD++ RTSE+AR+FGIDFFSVLSRGSQYRVE+++LR+ N++A+SP QVA Q
Sbjct: 2340 MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRLQVAGQA 2399
Query: 1263 AMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLG 1318
AME +PLV EP S FY PVVVLDFQSLYPSMMIAYNLC+ T LGK P T G
Sbjct: 2400 AMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGKFDPKTGGTSG 2455
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 85/115 (73%), Gaps = 1/115 (0%)
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL-APSQQILHRIFNARQLALKLIA 1398
PN + P +R+G+LP +L EIL TR+M+K A+++ Q++L R NARQ ALK+I+
Sbjct: 2618 PNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMIS 2677
Query: 1399 NVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
NVTYGYTAAGFSGRMP AELAD+IV+ GR TL A V+ ++ W+A V+YGDTD
Sbjct: 2678 NVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTVDNHKTWQASVVYGDTD 2732
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 23/100 (23%)
Query: 7 DSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
DS + SVR+V++D Y++ + +++PV+R++GSTPAGQ++CLH+H A
Sbjct: 5 DSPLISVRVVNVDWYLS----------------EESKLPVVRIFGSTPAGQRSCLHLHGA 48
Query: 67 LPYLYV-----PCADIPVQLRQEDDGYMHAISLALEKALK 101
LPY V + I Q ED G ++A+ LE+AL+
Sbjct: 49 LPYFMVRPMEEESSAICAQF--EDPGSLNALLPQLEQALE 86
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 123 KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPD 170
+ G V QP ESH+PFLLQ +DYN+ GM ++HL F P+P+
Sbjct: 162 QAGHVLSTRFQPFESHVPFLLQVFIDYNISGMSYVHLRNALFLQPLPE 209
Score = 41.2 bits (95), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 947 DPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVAL----AFENDSDHAVEI 998
+PA+AG G++LT+LS+E+ + RPDPR D ++ V AF + AVE
Sbjct: 2035 EPAAAGRGDRLTVLSLELHVQVPASRRPDPRRDCVHAVCWRVKDAFTSAEREAVET 2090
>gi|154286642|ref|XP_001544116.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407757|gb|EDN03298.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 429
Score = 283 bits (724), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 242/448 (54%), Gaps = 63/448 (14%)
Query: 931 PDGRSKPT------PLSQI---------GFQDPASAGA------GEQLTLLSIEVQAESR 969
P GR KP+ LSQI GF+ + ++++S+EV +R
Sbjct: 2 PKGRKKPSQKPGSSALSQIEGPTQKDRHGFKYSQKKPTRNVRQEAQYMSVMSLEVHVNTR 61
Query: 970 GDLRPDPRYDSINVVALAFE------NDSDHAVEIYVLLYCKSESHQRSLVGIPD--CKV 1021
G L P+P D I+ + + ND D + I + SE+ + P +
Sbjct: 62 GTLVPNPEEDEISCIFWCVQDGETEINDDDDSAGITAGIIALSENESLAARISPTMVSEF 121
Query: 1022 FVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LGIGLLNDISRTPLE 1080
E+ L + + ++ DPDIL G+++ S G+L ERA + L +++SR
Sbjct: 122 EEEQTELDLLTRLVDVVRQRDPDILTGYEVHNSSWGYLIERARYKYDYDLCDELSRVKTN 181
Query: 1081 S--KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
S +I G+ D WG H S + + GR ++N+
Sbjct: 182 SHGRIGKGN------------------------------DRWGFNHTSSIRITGRHMINI 211
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
WR MRGE+ L YT+E V +L ++IP PF+ LTKWF S R + + Y + R +L
Sbjct: 212 WRAMRGELNLLQYTMENVVFHLLHQRIPHYPFQDLTKWFTSKRPRDIAKVINYFLSRIQL 271
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
+L+I+ ++I+RTSE AR+ GIDFFSV SRGSQ++VES++ R+A +N++ ISPG QV
Sbjct: 272 DLKIIESNELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENFILISPGKKQV 331
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK-ENTL 1317
Q A+ECLPLVMEP+S FY P++VLDFQSLYPS+MIAYN C+ TCLG+++ + +N L
Sbjct: 332 GQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRVVSWRGQNKL 391
Query: 1318 GVSSFRPDLHVLRDLKDELLIPPNGVMY 1345
G FR +L KD++ I PNG++Y
Sbjct: 392 GFIDFRRPAGLLELFKDQINIAPNGIIY 419
>gi|339898271|ref|XP_001465833.2| putative DNA polymerase zeta catalytic subunit [Leishmania infantum
JPCM5]
gi|321399485|emb|CAM68262.2| putative DNA polymerase zeta catalytic subunit [Leishmania infantum
JPCM5]
Length = 3085
Score = 279 bits (714), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 217/353 (61%), Gaps = 17/353 (4%)
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
D++ + + +HV GRI ++ + +R E+K+ Y++ V +L + +P L++ F
Sbjct: 2112 DQYAKRFGTDIHVVGRICTSLGKDLRKEIKMPSYSLTMVHVKLLGQPLPYFTDSYLSELF 2171
Query: 1178 -----ASGPGRA-RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGS 1231
A PG R+ + Y+ R I +L R E +R++GI V++RGS
Sbjct: 2172 LTPQCADAPGGGERHTALRYLASRVAAPHRIACKLRWFTRLLEFSRMYGILTKEVITRGS 2231
Query: 1232 QYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA-DPVVVLDFQSL 1290
Q+RVE+ LLR AH Y +SP QV QP +EC+PLVM+P+S Y DPVVVLDF+SL
Sbjct: 2232 QFRVEATLLRFAHPLGYAMLSPSLSQVHRQPRIECIPLVMQPKSDLYRHDPVVVLDFRSL 2291
Query: 1291 YPSMMIAYNLCFCTCLGKILPSKENTLGV-SSFRPDLHVLRDL-------KDELLIPPNG 1342
YPS++IAYNLC+ TCLG + P LGV FR L +L D ++ PNG
Sbjct: 2292 YPSLIIAYNLCYSTCLGLVQPHSHGRLGVLPRFRQSNAALAELLPDDGAQHDGVVFSPNG 2351
Query: 1343 VMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-PSQQI-LHRIFNARQLALKLIANV 1400
M+V P R G+LP++++ +L TR V+ A+K +A PS+ I + + +QLALKL+ANV
Sbjct: 2352 AMFVSPSTRVGLLPQMVQAVLDTRFEVQAALKHIAVPSEDITMQQRLQEQQLALKLLANV 2411
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
TYGYTAA ++GRMPC +LA++IV GR TLE+AI ++ W+A+V+YGDTD
Sbjct: 2412 TYGYTAASYTGRMPCVDLAEAIVSLGRQTLERAIELIHSTPAWRAEVVYGDTD 2464
>gi|157869856|ref|XP_001683479.1| putative DNA polymerase zeta catalytic subunit [Leishmania major
strain Friedlin]
gi|68126544|emb|CAJ04879.1| putative DNA polymerase zeta catalytic subunit [Leishmania major
strain Friedlin]
Length = 3096
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
D + + + +HV GRI ++ R +R E+K+ Y++ V +L + +P L++ F
Sbjct: 2122 DHYAKRFGTNMHVVGRICTSLGRDLRKEIKMPSYSLSMVHVQLLGQPLPYFTDSYLSELF 2181
Query: 1178 -------ASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRG 1230
A G G R+ + Y+ R I +L R E +R++GI V++RG
Sbjct: 2182 LTPQCADALGGGE-RHTALRYLASRVAAPHRIACKLRWFTRLLEFSRMYGILTKEVITRG 2240
Query: 1231 SQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA-DPVVVLDFQS 1289
SQ+RVE+ LL AH Y +SP QV QP +EC+PLVM+P+SG Y DPVVVLDF+S
Sbjct: 2241 SQFRVEATLLHFAHPLRYAMLSPSLSQVHRQPRIECIPLVMQPKSGLYRHDPVVVLDFRS 2300
Query: 1290 LYPSMMIAYNLCFCTCLGKILPSKENTLGV-SSFRPDLHVLRDL-------KDELLIPPN 1341
LYPS++IAYNLC+ TCLG + P LGV FR L +L D ++ PN
Sbjct: 2301 LYPSLIIAYNLCYSTCLGIVQPHSHGRLGVLPRFRQSNAALAELLPDDGTQHDGVVFSPN 2360
Query: 1342 GVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-PSQQI-LHRIFNARQLALKLIAN 1399
G M+VPP R G+LP++++ +L TR V+ A+K +A PS I + + +QLALK++AN
Sbjct: 2361 GAMFVPPSTRVGLLPQMVQAVLDTRFEVQAALKHIAVPSGDITMQQRLQEQQLALKMLAN 2420
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
VTYGYTAA ++GRMPC +LA++IV GR TLE+ I ++ W+A+V+YGDTD
Sbjct: 2421 VTYGYTAASYTGRMPCVDLAEAIVSLGRQTLERTIELIHNTPAWRAEVVYGDTD 2474
>gi|398015726|ref|XP_003861052.1| DNA polymerase zeta catalytic subunit, putative [Leishmania donovani]
gi|322499276|emb|CBZ34349.1| DNA polymerase zeta catalytic subunit, putative [Leishmania donovani]
Length = 3085
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 217/353 (61%), Gaps = 17/353 (4%)
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
D++ + + +HV GRI ++ + +R E+K+ Y++ V +L + +P L++ F
Sbjct: 2112 DQYAKRFGTDIHVVGRICSSLGKDLRKEIKMPSYSLTMVHVKLLGQPLPYFTDSYLSELF 2171
Query: 1178 -----ASGPGRA-RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGS 1231
A PG R+ + Y+ R I +L R E +R++GI V++RGS
Sbjct: 2172 LTPQCADAPGGGERHTALRYLASRVAAPHRIACKLRWFTRLLEFSRMYGILTKEVITRGS 2231
Query: 1232 QYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA-DPVVVLDFQSL 1290
Q+RVE+ LLR AH Y +SP QV QP +EC+PLVM+P+S Y DPVVVLDF+SL
Sbjct: 2232 QFRVEATLLRFAHPLGYAMLSPSLSQVQRQPRIECIPLVMQPKSDLYRHDPVVVLDFRSL 2291
Query: 1291 YPSMMIAYNLCFCTCLGKILPSKENTLGV-SSFRPDLHVLRDL-------KDELLIPPNG 1342
YPS++IAYNLC+ TCLG + P LGV FR L +L D ++ PNG
Sbjct: 2292 YPSLIIAYNLCYSTCLGLVQPHSHGRLGVLPRFRQSNAALAELLPDDGAQHDGVVFSPNG 2351
Query: 1343 VMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-PSQQI-LHRIFNARQLALKLIANV 1400
M+V P R G+LP++++ +L TR V+ A+K +A PS+ I + + +QLALK++ANV
Sbjct: 2352 AMFVSPSTRVGLLPQMVQAVLDTRFEVQAALKHIAVPSEDITMQQRLQEQQLALKMLANV 2411
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
TYGYTAA ++GRMPC +LA++IV GR TLE+AI ++ W+A+V+YGDTD
Sbjct: 2412 TYGYTAASYTGRMPCVDLAEAIVSLGRQTLERAIELIHSTPAWRAEVVYGDTD 2464
>gi|123410205|ref|XP_001303643.1| DNA polymerase family B containing protein [Trichomonas vaginalis G3]
gi|121885038|gb|EAX90713.1| DNA polymerase family B containing protein [Trichomonas vaginalis G3]
Length = 1174
Score = 277 bits (709), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 183/517 (35%), Positives = 271/517 (52%), Gaps = 69/517 (13%)
Query: 946 QDPASAGAGEQ-LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSD--HAVEIYVLL 1002
QD + G Q L +L IEV SRG L P+P D I D + V +V
Sbjct: 370 QDIETGEHGSQFLKVLFIEVGCSSRGKLLPNPAMDQIVCACFTLMIDKEIIEKVTFWV-- 427
Query: 1003 YCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER 1062
++G KV S E L I + DPDI++GW+I+ S+ ++ ER
Sbjct: 428 ------GPNLVIGE---KVEFFSSERELLVGVINYILKIDPDIIVGWNIERESVFYINER 478
Query: 1063 AAHLGIG-LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWG 1121
LGI ++SRT K+ DE
Sbjct: 479 CKILGIKDFYAEVSRT---------------------------------GKNPHAMDEVR 505
Query: 1122 RTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
++ GR+ +N+WR++R + L YT+ +V++ L K P I ++ W S P
Sbjct: 506 -------YIEGRLTVNLWRVVRHQAALRSYTLASVSDHFLGTKFPDIKQSQISYWLHSAP 558
Query: 1182 GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLR 1241
+R V Y RA + + I ++ + EL+ + G DF S SRGSQ+++ES+L+R
Sbjct: 559 ----FRFVSYCRKRATVIISICLAMNFVEYYCELSSIIGADFASTYSRGSQFQIESLLIR 614
Query: 1242 LAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLC 1301
++ + SP +V+ Q A LPLVMEP SGFY+DPV+V+DFQSLYPS +IAYNL
Sbjct: 615 VSKRLGFCLPSPTRFEVSQQRAPMALPLVMEPMSGFYSDPVLVIDFQSLYPSSIIAYNLD 674
Query: 1302 FCTCLGKILPSKENT---LGVSSFRPDLHVLRDLKD--ELLIPPNGVMYVPPKVRKGVLP 1356
+ + +G+ NT LGV + VL +L + +++ PN V+YV VR G+LP
Sbjct: 675 YTSIVGRT--EDANTGGRLGVYEHKVPTRVLEELLENGKIINTPNDVLYVTKDVRPGLLP 732
Query: 1357 RLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCA 1416
+L++IL+ R +KQ +KK ++ + I +ARQ+ALK+IA TYGYT+A FSGRMPC
Sbjct: 733 AMLDQILNLRAFIKQTLKKTKNAK--MKSILDARQMALKVIAACTYGYTSAHFSGRMPCV 790
Query: 1417 ELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
EL+DSIV+C R LE ++++ +N + V+YGDTD
Sbjct: 791 ELSDSIVECSRHVLEFTLNYIEKNYP-ELSVLYGDTD 826
>gi|66824397|ref|XP_645553.1| DNA polymerase zeta catalytic subunit [Dictyostelium discoideum AX4]
gi|60473728|gb|EAL71668.1| DNA polymerase zeta catalytic subunit [Dictyostelium discoideum AX4]
Length = 2701
Score = 277 bits (709), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/381 (37%), Positives = 223/381 (58%), Gaps = 33/381 (8%)
Query: 951 AGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVV--------ALAFENDSDHAVEIYVLL 1002
+ + LT+LS+E+ SR +L P+P +DSI + ++ E D ++ +++
Sbjct: 1710 SNQNQNLTILSVEIHCNSRDNLNPNPEFDSIQSIIYCIRDEQSIEIEGDQYQDIKGILMV 1769
Query: 1003 YCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER 1062
++ + G+ +C + V E LF F++++ S+D DIL+G+++Q S+G+L ER
Sbjct: 1770 NDGHYENENNSYGL-NCFIKVLHNEFELFKSFVELIRSYDIDILVGFEVQMSSIGYLIER 1828
Query: 1063 AAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGR 1122
A LG+ L ++ISR + + G + + +G A + +KD D++
Sbjct: 1829 ANQLGLSLCDEISRV-ISNTGLTGQNTTTTKG------ANRTKRTNYFSKD---RDQYSF 1878
Query: 1123 THASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPG 1182
H +G+ + GRIVLN+WRL+R E+ L+ YT + + VL ++ F+ LT W+ G G
Sbjct: 1879 EHFTGMKIIGRIVLNLWRLLRHEITLDNYTYQNLCFHVLNKRQEEYSFKKLTNWYGGGGG 1938
Query: 1183 RA--------------RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLS 1228
+ R+R +EY + + + N ++ D+I RTSE +RV+GIDF SVLS
Sbjct: 1939 SSNTFQQHQHQHQYQQRWRTLEYYLKKCENNFNLIYAFDLIQRTSEFSRVYGIDFNSVLS 1998
Query: 1229 RGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQ 1288
RGSQY VESMLLRL +N++ +SP +V SQP E +PLVM+P + Y PVVVLDFQ
Sbjct: 1999 RGSQYTVESMLLRLTKPENFILLSPSREEVLSQPMPESIPLVMDPITRLYNSPVVVLDFQ 2058
Query: 1289 SLYPSMMIAYNLCFCTCLGKI 1309
SLYPS+MIAYN C+ TCLGK+
Sbjct: 2059 SLYPSIMIAYNYCYSTCLGKV 2079
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Query: 1317 LGVSSFRPDLHVLRDLKDELL-IPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
G S L +L + E L I PN V++ +R G+ P+LL+E+L TRIMVK+A+KK
Sbjct: 2157 FGASWLENKLGLLESISIEHLNISPNNVIFTDKSIRTGLFPKLLQEVLDTRIMVKRAMKK 2216
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + + I NARQL LK++ANV +GYTAA +SGRMPC E+ DSIVQ R TLE AI
Sbjct: 2217 IDKGDKKMFNILNARQLGLKMMANVAFGYTAATYSGRMPCIEIGDSIVQTARETLEAAIK 2276
Query: 1436 FVNENEKWKAKVIYGDTDRYTVCI 1459
V +++W AKV+YGDTD V +
Sbjct: 2277 IVESSKEWNAKVVYGDTDSLFVLL 2300
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 60/219 (27%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVN----EVPVIRVYGSTPAGQKTCLHIHRA 66
FSVRIV ID+Y P+ G D+ S L N EVP++R++GSTPAGQK CLH+H+
Sbjct: 18 FSVRIVDIDYYQTRPVQGLDVMVSPLSSSNNNKTIEEVPIVRIFGSTPAGQKCCLHLHQL 77
Query: 67 LPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSK----------------- 109
PY ++ + + + Y+ + L AL + +
Sbjct: 78 FPYFFIEYTENSLST-EYVSTYIRKLVSTLNLALNHSNNNNNNNNNNNNNNNNSNNNINS 136
Query: 110 --------RQHVHECSLVRAK------------------------------KGGAVFDKS 131
+Q++ LVR + + G + +
Sbjct: 137 NNNNNVFLKQYIFNAKLVRGRPFYGYHSTDKIFIKIYLYNPDDINRVANLLRSGMIMSRC 196
Query: 132 LQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPD 170
+ ESHIPF+LQ +DYNL GM ++ + FR P+P+
Sbjct: 197 FRVFESHIPFILQVFLDYNLSGMSNIEFTNAYFRLPLPE 235
>gi|407867747|gb|EKG08654.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi]
Length = 1793
Score = 276 bits (705), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 181/527 (34%), Positives = 268/527 (50%), Gaps = 59/527 (11%)
Query: 983 VVALAFENDSDHAVEIYVLLYCKSESH------QRSLVGIPDCKVFVCSKEIHLFSHFIK 1036
++A+A S + V L+C S Q+ G+ D VF E HL +
Sbjct: 838 LLAVALGRTSSFTESVGVRLFCVGPSKTPIRRLQQPFSGVVD--VFFLPSEFHLLRQVRQ 895
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERAAHL--------------GIGLLNDISRTPLESK 1082
LC +DPDI++ WD +G L R + G G+ N +E+
Sbjct: 896 ELCFYDPDIILSWDGSRYGVGPLERRYRIVLQRSFAQDFSRLAGGYGMANGKGEEAVETD 955
Query: 1083 IAAGD---------------SEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
A GD S + D ++ P ++ A G
Sbjct: 956 -ALGDCASDGDALFSSPSSPSSLFSVPSVDGVVELPANKKTSRAAAPAAPLLGVEEMVRG 1014
Query: 1128 L--HVGG------RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFAS 1179
L GG R+V+++ R +R E+KL T++ V + + +P LT+ + S
Sbjct: 1015 LSRRFGGSDCVPGRVVVDLGRQLRKEMKLPSQTLQMVYQKLFHSSLPYFTDAALTEMYTS 1074
Query: 1180 GPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESML 1239
R + ++ R I L R E +R++GI F+ VLSRGSQYRVE+ L
Sbjct: 1075 RSDDMRRVALSVLLTRVVTPHRIAQHLRFYTRVVEFSRMYGILFYEVLSRGSQYRVEATL 1134
Query: 1240 LRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA-DPVVVLDFQSLYPSMMIAY 1298
+ Y +SP +V QP++ +PL+M+P S FY DP+VVLDF+SLYPS++IAY
Sbjct: 1135 HNMTKPMGYAMLSPSPEEVHHQPSLVSMPLIMQPRSDFYKDDPIVVLDFRSLYPSIIIAY 1194
Query: 1299 NLCFCTCLGKILPSKENTLGV--SSFRPDLHVLRDLKDELLIP--------PNGVMYVPP 1348
NLC+ TCLGK+ + LGV S + D +LR L ++ + P PNG M++ P
Sbjct: 1195 NLCYSTCLGKVSKHRRGRLGVLTSYKQADPLLLRLLAEDDMCPKSHRVTFAPNGCMFLSP 1254
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLA-PS-QQILHRIFNARQLALKLIANVTYGYTA 1406
+VRKGVLP++L+ +L TR+ V A K +A PS + + RI +Q A+K++AN TYGYTA
Sbjct: 1255 EVRKGVLPQMLQALLDTRLEVLAAFKHVAQPSGDKYMQRILQEQQTAIKMLANTTYGYTA 1314
Query: 1407 AGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
A F+GRMPC ++AD+ V GR TLE+A+ +N + W A+V+YGDTD
Sbjct: 1315 ASFTGRMPCVDVADATVMLGRQTLERAMRLINIHPGWDAEVVYGDTD 1361
>gi|344301399|gb|EGW31711.1| DNA polymerase zeta [Spathaspora passalidarum NRRL Y-27907]
Length = 1519
Score = 273 bits (697), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 264/521 (50%), Gaps = 88/521 (16%)
Query: 957 LTLLSIEVQAES-RGDLRPDPRYDSINVVALAFE------NDSDHAVEIYVLLYCK-SES 1008
LT S+E+ A+ L DP D I++V +F+ N ++ I + K SE
Sbjct: 686 LTCFSMEIHADPPNSKLTVDPLRDPISIVFYSFDDKNGMFNHFEYTSGILIFNTRKYSEQ 745
Query: 1009 HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAH-LG 1067
L + + E+ + + ++++ FDPDIL G++I S G++ ER +
Sbjct: 746 FISQLSSSLKKNIELFDDEVEMTARLVQLIEIFDPDILAGYEINAMSWGYIIERLRNVFD 805
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
I +L D SR +S GD WG TH S
Sbjct: 806 INILADFSRGSDKSNGKFGD-------------------------------RWGYTHTSN 834
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ + GR + NVWRL+R ++ L Y++E V+ +L R +P L++W ++G
Sbjct: 835 IEINGRHMFNVWRLLRSDLSLTSYSLENVSYHLLHRSLPRYSNYQLSQWLSTGTFSNVLV 894
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
+ Y R + ++I+ ++I R E +R+ GI+F + RGSQ++VES+L RL +++
Sbjct: 895 ALSYYSTRIDMVIKIIEVQELITRNVEHSRLIGIEFNANFYRGSQFKVESILARLTKSES 954
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
L SP Q + P+VVLDFQSLYPS+MIAYN C+ T LG
Sbjct: 955 LLLNSPSKQQKS---------------------PLVVLDFQSLYPSIMIAYNYCYSTLLG 993
Query: 1308 KILPSKENTLGVSSFRP---DLHVLRDLK------------DELLIPPNGVMYVPPKVRK 1352
K+ ++F P D+ L +LK + + I PNG ++V VRK
Sbjct: 994 KL----------NNFSPNMNDIGYLDNLKIPPGMIDLLKKDNAINISPNGFIFVKSNVRK 1043
Query: 1353 GVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGR 1412
+L ++LEE L+ RI VK K + L R++N+RQLALKLIANVTYGYT+A FSGR
Sbjct: 1044 SILAKMLEEFLALRIKVKAVTKSFRDDTE-LTRVYNSRQLALKLIANVTYGYTSATFSGR 1102
Query: 1413 MPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
MP ++++D+IV GR L K+I + E + AKV+YGDTD
Sbjct: 1103 MPNSDISDAIVSTGREILMKSIELI-EAGNYGAKVVYGDTD 1142
>gi|401422575|ref|XP_003875775.1| putative DNA polymerase zeta catalytic subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492014|emb|CBZ27288.1| putative DNA polymerase zeta catalytic subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 3059
Score = 272 bits (696), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 217/353 (61%), Gaps = 17/353 (4%)
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
D++ + +HV GRI ++ + +R E+K+ Y++ V +L + +P +++ F
Sbjct: 2105 DQYAERFGANMHVVGRICTSLGKDLRKEIKMPSYSLPMVHVKLLGQPLPYFTDSYVSELF 2164
Query: 1178 AS-----GPGRA-RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGS 1231
+ PG R+ + Y+ R I +L R E +R++GI V++RGS
Sbjct: 2165 LTPQCTDAPGGGERHTALRYLASRVAAPHRIACKLRWFTRLLEFSRMYGILTKEVITRGS 2224
Query: 1232 QYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA-DPVVVLDFQSL 1290
Q+RVE+ LLR AH Y +SP QV QP +EC+PLVM+P+S Y DPVVVLDF+SL
Sbjct: 2225 QFRVEATLLRFAHPLGYAMLSPSLSQVHRQPRIECIPLVMQPKSDLYRHDPVVVLDFRSL 2284
Query: 1291 YPSMMIAYNLCFCTCLGKILPSKENTLGV-SSFRPDLHVLRDL-------KDELLIPPNG 1342
YPS++IAYNLC+ TCLG + P LGV FR L +L D ++ P+G
Sbjct: 2285 YPSIIIAYNLCYSTCLGIVQPHSHGRLGVLPRFRQSEAALAELLPDDGAQHDGVVFSPSG 2344
Query: 1343 VMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-PSQQI-LHRIFNARQLALKLIANV 1400
M+VPP R G+LP++++ +L R V+ A+K +A PS+ + + + +QLALK++ANV
Sbjct: 2345 AMFVPPSTRVGLLPQMVQAVLDARFEVQAALKHIAVPSEDMTMQQRLQEQQLALKMLANV 2404
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
TYGYTAA ++GRMPC +LA++IV GR TLE+A++ ++ W+A+V+YGDTD
Sbjct: 2405 TYGYTAASYTGRMPCVDLAEAIVSLGRQTLERAMALIHSTPAWRAEVVYGDTD 2457
>gi|86563326|ref|NP_498248.2| Protein Y37B11A.2 [Caenorhabditis elegans]
gi|351065547|emb|CCD61513.1| Protein Y37B11A.2 [Caenorhabditis elegans]
Length = 1133
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 188/545 (34%), Positives = 280/545 (51%), Gaps = 73/545 (13%)
Query: 940 LSQIGFQDPASAGAGEQ-----LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDH 994
LSQ +P+++ + L + S+E+ +++ + PD I V+LA ND
Sbjct: 325 LSQTSIGEPSTSEKSVESDIVGLCVASLELLVDTKMPM-PDAASSEIVSVSLAIYND--- 380
Query: 995 AVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSH------FIKILCSFDPDILMG 1048
+ C S L +P + + +H+ + K + +D D+++G
Sbjct: 381 ------VCRCSSPKLHVLLTTLPVGPAYSDRRVVHMETELEMLEEVAKWIVQYDVDVMIG 434
Query: 1049 WDIQGGSLGFLAERAAHLGIGLLNDISRT-PLESKIAAGDSEISERGITDNMLAEPVVAE 1107
++ S GF R LG + D + E I D EI+ +A P
Sbjct: 435 YETIRLSWGFFFRRIKLLGSRISMDRALIDAYEDHIEVDDQEIT--------VAPP---- 482
Query: 1108 SLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPS 1167
GR++++VW+++R ++ L Y + + VLR+KIP
Sbjct: 483 -----------------------KGRLLVSVWKVVRSDLALRNYDLGSAVANVLRKKIPM 519
Query: 1168 IPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVL 1227
+ L + R +++ + LN+ ++ +++ + +E+ARV+GI F V
Sbjct: 520 LDNAALMRRIKGERSAIRNDVHLHLLKLSSLNISLLTEMNWFLKNAEMARVYGIQFHEVW 579
Query: 1228 SRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDF 1287
+RGSQ RVESMLLRLAH N++A S + Q + E L L++EP+S Y DPV+VLDF
Sbjct: 580 TRGSQLRVESMLLRLAHRMNFVAPSITHLQRNMMGSPEQLQLILEPQSKVYFDPVIVLDF 639
Query: 1288 QSLYPSMMIAYNLCFCTCLGKI----------LPSKENTLGVSSFRP---DLHVLRDLKD 1334
QSLYPSM+IAYN C+ T LGKI +E LG + P D+ L K
Sbjct: 640 QSLYPSMVIAYNYCYSTILGKIGNLVQMNDESRNREEIVLGAIKYHPSKDDIVKLVAYK- 698
Query: 1335 ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLAL 1394
E+ P M+V R+GV+P LL EIL+ RIMVK A+K+ + L RI +ARQLAL
Sbjct: 699 EVCASPLASMFVKKSKREGVMPLLLREILAARIMVKSAMKRTKNKK--LKRILDARQLAL 756
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDR 1454
KL+ANV+YGYTAA +SGRMPCAELAD+I+ GR TLE++I V + A+VIYGDTD
Sbjct: 757 KLVANVSYGYTAANWSGRMPCAELADAILGKGRETLERSIEMVQRGDYGGAEVIYGDTDS 816
Query: 1455 YTVCI 1459
V +
Sbjct: 817 MFVLV 821
>gi|224009706|ref|XP_002293811.1| DNA polymerase [Thalassiosira pseudonana CCMP1335]
gi|220970483|gb|EED88820.1| DNA polymerase [Thalassiosira pseudonana CCMP1335]
Length = 759
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 248/443 (55%), Gaps = 12/443 (2%)
Query: 1020 KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPL 1079
K+ S E L I+ + DPD+L+ WD QG +G+L ER LG + + L
Sbjct: 4 KIEKVSSEEGLLRRIASIVHNLDPDVLISWDTQGSGIGYLVERGVALGKPIDDSNGAGSL 63
Query: 1080 ESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVW 1139
SK S + R T ++ + A + +E +W RT A+ + GRIV+ W
Sbjct: 64 SSKCKIDMSRLLGR--TPKASSDEDKSGGSGAFELGVEVDWARTGAAAASIVGRIVVCGW 121
Query: 1140 RLMRGEVKL-NMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
++ E K N A+ TVL ++IP +LT+W++ G R+R +E+ + A
Sbjct: 122 KICSEECKHPNASYQPAIVSTVLNKRIPFHDELLLTRWYSGDNGVQRWRVIEHKLACAIS 181
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLS--RGSQYRVESMLLR-LAHTQNYLAISPGN 1255
N+ +++ LD++ R E AR+ G++F L RGSQY+VE +LLR L Y SP
Sbjct: 182 NVLLLDALDVLGRAGEGARLSGVEFSQSLPGIRGSQYKVEGVLLRALQSNMGYFFYSPSK 241
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
++Q A+EC + +EP+SGF+ DPVVV DF +LYPS++IAYNLC+ T GK+ K
Sbjct: 242 ADCSNQEALECQAMTLEPKSGFHFDPVVVCDFTALYPSLVIAYNLCYSTVAGKLDYHKRR 301
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA--- 1372
T V +R +D P G ++V V KGVLP++L+E+LSTR M+K+A
Sbjct: 302 TAAVLKHHMKSVPVRTKRDRAYAIPTGSVFVSESVLKGVLPQVLDEMLSTRAMLKKAAKE 361
Query: 1373 IKKLAP--SQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
KK P S +L +I ARQLALK +ANVTYGYT+A FSGR +AD+IV+CGR TL
Sbjct: 362 YKKRVPNLSPAVLRQI-EARQLALKYVANVTYGYTSATFSGRSAVPLVADAIVECGRRTL 420
Query: 1431 EKAISFVNENEKWKAKVIYGDTD 1453
AI+ N K + IYGDTD
Sbjct: 421 TNAINVANTWGKEASGSIYGDTD 443
>gi|261330373|emb|CBH13357.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1958
Score = 271 bits (692), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 273/538 (50%), Gaps = 81/538 (15%)
Query: 997 EIYVLLYCKSESHQRSLVGIPDCKVFVCSKEI-------HLFSHFIKILCSFDPDILMGW 1049
+ V L+C + Q+ VG P F + E+ HL H + + ++DPD+++ W
Sbjct: 953 RVKVRLFCVTGLSQKVPVGQPRVSPFSGAVEVVQLPSEEHLLRHVMWEIRAYDPDVIISW 1012
Query: 1050 DIQGGSLGFLAER-AAHLGIGLLNDISR-----------------TPLESKIAAGDSEIS 1091
++ +G LA R L L D+SR P E + D IS
Sbjct: 1013 EVGRSGIGLLALRYKIALRRSLARDLSRLTPDSALFNQRSENIHLNPEEKPSNSSDENIS 1072
Query: 1092 E-------------RGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA------------- 1125
E + + A + + ++ G T+A
Sbjct: 1073 EVECVSPSSDSSHSSCSESTLFSTGSGATAATTRGSVAHVRGGSTNAHPNLGDLTKQLSR 1132
Query: 1126 ---SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPG 1182
V GRI++++ + +R ++L T++ V + + +P LT+ + +G
Sbjct: 1133 RFGGSPQVAGRIIVDLSKYLRKYLQLPSTTLQMVYKKLFNSSLPFFTDVALTRMYCAGEA 1192
Query: 1183 RARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRL 1242
+ + ++ R I L RT+E AR+FGI F VL+RGSQYRVE+ L R+
Sbjct: 1193 GMQRVFMSILLTRVVAPHRIAQHLHFFTRTAEFARMFGILFSEVLTRGSQYRVEATLHRM 1252
Query: 1243 AHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA-DPVVVLDFQSLYPSMMIAYNLC 1301
A + +SP V QP ++ +PL+M+P SGFY DPVVVLDF+SLYPS++IAYN+C
Sbjct: 1253 AKPMGFALLSPPLEVVHRQPRLQSMPLIMQPRSGFYKDDPVVVLDFRSLYPSIVIAYNIC 1312
Query: 1302 FCTCLGKILPSKENTLGV-SSFRPD-------LHVLRDLKDE----------------LL 1337
+ TCLG + LGV S++ D L L D+K++ +
Sbjct: 1313 YTTCLGSVGKGVYGRLGVLKSYKRDDMLLSSLLSGLADIKNDHNGKNDDNENSNTLHGVT 1372
Query: 1338 IPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-PSQQI-LHRIFNARQLALK 1395
PNG M++ P+ R+GVLP++L +L TR+ ++ A+K +A P I + +I +Q+A+K
Sbjct: 1373 FTPNGCMFLTPENREGVLPQMLRVLLDTRVDLQAALKHVAHPFGDIYMQQILQEQQMAIK 1432
Query: 1396 LIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
++AN TYGYTAA F+GRMPCA++AD+IV GR TLE+A+ +N + WKA+V+YGDTD
Sbjct: 1433 MLANTTYGYTAASFTGRMPCADVADAIVMLGRQTLERAMWLINSHPVWKAEVVYGDTD 1490
Score = 41.6 bits (96), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 135 HESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDAFFPRKFNYSSKQASADFQVIGCG 194
+E+H PF QF+ DY GMG + R +PD+ P + N ++ + + + C
Sbjct: 188 YEAHSPFHFQFMADYGAKGMGAFFIPSCTARSKLPDSVQPEQLNIAAVRPEGEPARLSCA 247
Query: 195 SYPMHLMGHQIKTLSG 210
+ + ++ G
Sbjct: 248 QIEVDVSASSLRFRDG 263
>gi|72392719|ref|XP_847160.1| DNA polymerase zeta catalytic subunit [Trypanosoma brucei TREU927]
gi|62359205|gb|AAX79648.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma brucei]
gi|70803190|gb|AAZ13094.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1958
Score = 270 bits (690), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 272/538 (50%), Gaps = 81/538 (15%)
Query: 997 EIYVLLYCKSESHQRSLVGIPDCKVFVCSKEI-------HLFSHFIKILCSFDPDILMGW 1049
+ V L+C + Q+ VG P F + E+ HL H + + ++DPD+++ W
Sbjct: 953 RVKVRLFCVTGLSQKVPVGQPRVSPFSGAVEVVQLPSEEHLLRHVMWEIRAYDPDVIISW 1012
Query: 1050 DIQGGSLGFLAER-AAHLGIGLLNDISR-----------------TPLESKIAAGDSEIS 1091
++ +G LA R L L D+SR P E + D IS
Sbjct: 1013 EVGRSGIGLLALRYKIALRRSLARDLSRLTPDSALFNQRSENIHLNPEEKPSNSSDENIS 1072
Query: 1092 E-------------RGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA------------- 1125
E + + A + + ++ G T+A
Sbjct: 1073 EVECVSPSSDSSHSSCSESTLFSTGSGATAATTRGSVAHVRGGSTNAHPNLGDLTKQLSR 1132
Query: 1126 ---SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPG 1182
V GRI++++ + +R ++L T++ V + + +P LT+ + +G
Sbjct: 1133 RFGGSPQVAGRIIVDLSKYLRKYLQLPSTTLQMVYKKLFNSSLPFFTDVALTRMYCAGEA 1192
Query: 1183 RARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRL 1242
+ + ++ R I L RT+E AR+FGI F VL+RGSQYRVE+ L R+
Sbjct: 1193 GMQRVFMSILLTRVVAPHRIAQHLHFFTRTAEFARMFGILFSEVLTRGSQYRVEATLHRM 1252
Query: 1243 AHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA-DPVVVLDFQSLYPSMMIAYNLC 1301
A + +SP V QP ++ +PL+M+P SGFY DPVVVLDF+SLYPS++IAYN+C
Sbjct: 1253 AKPMGFALLSPPLEVVHRQPRLQSMPLIMQPRSGFYKDDPVVVLDFRSLYPSIVIAYNIC 1312
Query: 1302 FCTCLGKILPSKENTLGV-SSFRPD-------LHVLRDLKDE----------------LL 1337
+ TCLG + LGV S++ D L L D K++ +
Sbjct: 1313 YTTCLGSVGKGVYGRLGVLKSYKRDDMLLSSLLSGLADTKNDHNGKNDDNENSNTLHGVT 1372
Query: 1338 IPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-PSQQI-LHRIFNARQLALK 1395
PNG M++ P+ R+GVLP++L +L TR+ ++ A+K +A P I + +I +Q+A+K
Sbjct: 1373 FTPNGCMFLTPENREGVLPQMLRVLLDTRVDLQAALKHVAHPFGDIYMQQILQEQQMAIK 1432
Query: 1396 LIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
++AN TYGYTAA F+GRMPCA++AD+IV GR TLE+A+ +N + WKA+V+YGDTD
Sbjct: 1433 MLANTTYGYTAASFTGRMPCADVADAIVMLGRQTLERAMWLINSHPVWKAEVVYGDTD 1490
Score = 41.6 bits (96), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 135 HESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPDAFFPRKFNYSSKQASADFQVIGCG 194
+E+H PF QF+ DY GMG + R +PD+ P + N ++ + + + C
Sbjct: 188 YEAHSPFHFQFMADYGAKGMGAFFIPSCTARSKLPDSVQPEQLNIAAVRPEGEPARLSCA 247
Query: 195 SYPMHLMGHQIKTLSG 210
+ + ++ G
Sbjct: 248 QIEVDVSASSLRFRDG 263
>gi|71652700|ref|XP_815001.1| DNA polymerase zeta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70880023|gb|EAN93150.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma cruzi]
Length = 1885
Score = 270 bits (689), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 212/337 (62%), Gaps = 13/337 (3%)
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
V GR+V+++ R +R E+KL T++ V + + +P L + + S R +
Sbjct: 1117 VPGRVVVDLGRQLRKEMKLPSQTLQMVYQKLFHSSLPYFTDAALIEMYTSRSDDMRRVAL 1176
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
++ RA + I L R E +R++GI F+ VLSRGSQYRVE+ L R+ Y
Sbjct: 1177 SVLLTRAVIPHRIAQHLRFYTRVVEFSRMYGILFYEVLSRGSQYRVEATLHRMTKPMGYA 1236
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYA-DPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
+SP +V QP++ +PL+M+P S FY DP+VVLDF+SLYPS++IAYNLC+ TCLGK
Sbjct: 1237 MLSPSPEEVHHQPSLVSMPLIMQPRSDFYKDDPIVVLDFRSLYPSIIIAYNLCYSTCLGK 1296
Query: 1309 ILPSKENTLGV-SSFRP-DLHVLRDLKDELLIP--------PNGVMYVPPKVRKGVLPRL 1358
+ + LGV +S++ D +LR L ++ + P PNG M++ P+VRKGVLP++
Sbjct: 1297 VSKHRRGRLGVLTSYKQVDPLLLRLLAEDDMCPKSHRVTFAPNGCMFLSPEVRKGVLPQM 1356
Query: 1359 LEEILSTRIMVKQAIKKLA-PS-QQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCA 1416
L+ +L TR+ V A+K +A PS + RI +Q A+K++AN TYGYTAA F+GRMPC
Sbjct: 1357 LQALLDTRLEVLAALKHVAQPSGDNYMQRILQEQQTAIKMLANTTYGYTAASFTGRMPCV 1416
Query: 1417 ELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
++AD+ V GR TLE+A+ +N + W A+V+YGDTD
Sbjct: 1417 DVADATVMLGRQTLERAMRLINIHPGWDAEVVYGDTD 1453
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 21/134 (15%)
Query: 983 VVALAFENDSDHAVEIYVLLYCKSESH------QRSLVGIPDCKVFVCSKEIHLFSHFIK 1036
++A+A S + V L+C S Q+ G+ D VF E HL +
Sbjct: 930 LLAVALGRTSSFTESVGVRLFCVGPSKTPIRRLQQPFSGVVD--VFFLPSEFHLLRQVRQ 987
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEIS-ERGI 1095
LC +DPDI++ WD + G+G L R L+ A S +S G+
Sbjct: 988 ELCFYDPDIILSWD------------GSRYGVGPLERRYRIVLQRSFAQDFSRLSGGYGM 1035
Query: 1096 TDNMLAEPVVAESL 1109
D E V ++L
Sbjct: 1036 ADGKGEEAVETDAL 1049
>gi|342182636|emb|CCC92115.1| putative DNA polymerase zeta catalytic subunit [Trypanosoma
congolense IL3000]
Length = 1206
Score = 269 bits (687), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 219/382 (57%), Gaps = 31/382 (8%)
Query: 1103 PVVAESLLAKDAIIED---EWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
PV + +A + D + R GR ++++ + +R ++L YT++ V
Sbjct: 343 PVSGNAAVAGRVTVGDMTRQLSRRFGGNPRAAGRFIIDLSKYLRKALQLPSYTLQMVYLK 402
Query: 1160 VLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVF 1219
+ + IP LTK ++ G R+ + ++ R I L +RTSE AR+F
Sbjct: 403 LFNKTIPFFTDIALTKMYSCGDPGTRHVFLSVLLTRVVAQHRIAQHLQFYSRTSEFARMF 462
Query: 1220 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA 1279
GI F V++RGSQY VE+ L R+A + +SP V QP ++ +PL MEP SGFY
Sbjct: 463 GILFNEVVTRGSQYHVEATLYRMAKPMGFTMLSPPASVVHQQPRLQSMPLTMEPRSGFYK 522
Query: 1280 -DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGV-SSFRPDLHVLRDLKDE-- 1335
DPVVVLDF+SLYPS++IAYN+C+ TCLG + LGV +S+R D ++ L D
Sbjct: 523 DDPVVVLDFRSLYPSIVIAYNICYTTCLGIVGKRNYGRLGVLTSYRQDDSLILSLLDRDE 582
Query: 1336 ----------------------LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+ PNG M++ + R+GVLP++L +L TR+ VK AI
Sbjct: 583 SRNAASCTDGDEGDDTSKWSHSVTFAPNGTMFLTRETREGVLPQMLRVLLDTRVDVKAAI 642
Query: 1374 KKLA-PSQQI-LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+++A P + + +I +QLALK++AN TYGYTAA F+GRMPCA++AD+IV GR TLE
Sbjct: 643 ERVAKPHGDVYMQQILEKQQLALKMLANTTYGYTAASFTGRMPCADVADAIVMLGRQTLE 702
Query: 1432 KAISFVNENEKWKAKVIYGDTD 1453
+AI +N + WKA+V+YGDTD
Sbjct: 703 RAIMLINGHPTWKAEVVYGDTD 724
>gi|407394210|gb|EKF26847.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 786
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 213/348 (61%), Gaps = 13/348 (3%)
Query: 1119 EWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA 1178
+ R + + GR+V+++ R +R E+KL T++ V + + +P LT+ +
Sbjct: 7 RFSRRFGGSVRIPGRVVVDLGRQLRKEMKLPSQTLQMVHQKLFHSSLPYFTDAALTEMYT 66
Query: 1179 SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
S R + ++ RA I L R E +R++GI F+ VLSRGSQYRVE+
Sbjct: 67 SRSDDMRRVALSVLLTRAVTPHRIAQHLRFYTRVVEFSRMYGILFYEVLSRGSQYRVEAT 126
Query: 1239 LLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA-DPVVVLDFQSLYPSMMIA 1297
L R+ Y +SP +V QP + +PL+M+P S FY DP+VVLDF+SLYPS++IA
Sbjct: 127 LHRMTKPMGYAMLSPSPEEVRHQPRLVSMPLIMQPRSDFYKDDPIVVLDFRSLYPSIIIA 186
Query: 1298 YNLCFCTCLGKILPSKENTLGV-SSFRP-DLHVLRDLKDE--------LLIPPNGVMYVP 1347
YNLC+ TCLG++ + LGV +S++ D +LR L ++ + PNG M++
Sbjct: 187 YNLCYSTCLGRVSKHRRGRLGVLTSYKQVDPLLLRLLAEDDMCSKSNRVTFAPNGCMFLS 246
Query: 1348 PKVRKGVLPRLLEEILSTRIMVKQAIKKLA-PSQ-QILHRIFNARQLALKLIANVTYGYT 1405
P+VRKGVLP++L+ +L TR+ V A+K +A P + + RI +Q A+KL+AN TYGYT
Sbjct: 247 PEVRKGVLPQMLQALLDTRLEVLAALKHVAQPCEDNYMQRILQEQQTAIKLLANTTYGYT 306
Query: 1406 AAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
AA F+GRMPC ++AD+ V GR TLE+A+ +N + W A+V+YGDTD
Sbjct: 307 AASFTGRMPCVDVADATVMLGRQTLERAMRLINSHPGWDAEVVYGDTD 354
>gi|74194069|dbj|BAE36943.1| unnamed protein product [Mus musculus]
Length = 577
Score = 267 bits (682), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 167/231 (72%), Gaps = 4/231 (1%)
Query: 1226 VLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVL 1285
VL+RGSQYRVESM+LR+A NY+ ++P Q + A C+PL+MEPES FY++ V+VL
Sbjct: 1 VLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPLCVPLIMEPESRFYSNSVLVL 60
Query: 1286 DFQSLYPSMMIAYNLCFCTCLGKIL---PSKENTLGVSSFRPDLHVLRDLKDELLIPPNG 1342
DFQSLYPS++IAYN CF TCLG + E G +S R +L ++ ++ + PNG
Sbjct: 61 DFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDLLYQIRHDVTVSPNG 120
Query: 1343 VMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTY 1402
V +V P VRKGVLPR+LEEIL TR+MVKQ++K + L R+ NARQL LKLIANVT+
Sbjct: 121 VAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK-QDRALSRMLNARQLGLKLIANVTF 179
Query: 1403 GYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
GYTAA FSGRMPC E+ DSIV R TLE+AI VN+ +KW A+V+YGDTD
Sbjct: 180 GYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTD 230
>gi|389601339|ref|XP_001565217.2| putative DNA polymerase zeta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|322505002|emb|CAM36652.2| putative DNA polymerase zeta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 2981
Score = 263 bits (673), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 212/353 (60%), Gaps = 17/353 (4%)
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
D++ + + +HV GRI +++ + +R +K+ Y++ V +L + +P L++ F
Sbjct: 2011 DKYAKRFGASMHVVGRICMSLGKDLRKYIKMPSYSLPMVHVELLGQPLPYFTDSYLSELF 2070
Query: 1178 AS-----GP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGS 1231
+ P G R+ + Y+ R I +L + E +R++G+ V+SRGS
Sbjct: 2071 LTPQCTDAPVGGERHTALRYLASRVAALHRIACKLHWFTKLLEFSRMYGVLTKEVISRGS 2130
Query: 1232 QYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA-DPVVVLDFQSL 1290
Q+RVE+ LRLA Y +SP QV QP +EC+PLVM+P+S Y DPVVVLDF+SL
Sbjct: 2131 QFRVEATFLRLAQPLGYAMLSPSLSQVHRQPRIECIPLVMQPKSDLYRHDPVVVLDFRSL 2190
Query: 1291 YPSMMIAYNLCFCTCLGKILPSKENTLGV-SSFRPDLHVLRDL-------KDELLIPPNG 1342
YPS++IAYNLC+ TCLG + P LGV F+ L +L D ++ NG
Sbjct: 2191 YPSVIIAYNLCYSTCLGMVQPQSHGRLGVLPRFKQSDATLAELLSDDGAQHDGVVFTLNG 2250
Query: 1343 VMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP--SQQILHRIFNARQLALKLIANV 1400
M+VPP R G+LP++++ +L R V+ A+K +A + + +QLALK++ANV
Sbjct: 2251 AMFVPPSTRVGLLPQMMKAVLDARFEVQAALKHIAAPLEDMAMEQRLQEQQLALKMLANV 2310
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
TYGYTAA ++GRMPC +LA++IV GR TLE+AI+ ++ W+A+V+YGDTD
Sbjct: 2311 TYGYTAASYTGRMPCVDLAEAIVSLGRQTLERAIALIHSTPAWRAEVVYGDTD 2363
>gi|340055352|emb|CCC49665.1| putative DNA polymerase zeta catalytic subunit, fragment [Trypanosoma
vivax Y486]
Length = 1934
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 205/348 (58%), Gaps = 23/348 (6%)
Query: 1129 HVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRC 1188
+ GR+V+++ R +R + L Y+++ V + + +P LTK F + R+
Sbjct: 1174 QIPGRVVVDLSRQLRKTLALPSYSLQMVYQQFFDKSLPYFTDVALTKMFRNRDPGMRHVA 1233
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
+ +V R ++ + L RT+E AR++GI F VL+RGSQYRVE+ L R+A +
Sbjct: 1234 LSTLVTRVVVSHRVTQHLRFFTRTAEYARMYGILFEEVLTRGSQYRVEATLHRIAKPMGF 1293
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYA-DPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
+SP V QP M+ + L+M+P S FY DPVVVLDF+SLYPS++IAYN+C+ TCLG
Sbjct: 1294 AMLSPPIEFVHKQPRMQSMALIMQPLSNFYKDDPVVVLDFRSLYPSIVIAYNICYSTCLG 1353
Query: 1308 KILPSKENTLGV-SSFRPDLH-------------------VLRDLKDELLIPPNGVMYVP 1347
I LGV +S+R V D ++ PNG M++
Sbjct: 1354 SIRLHGRGRLGVLNSYRQADSLLLSLLSDDGRNVNSDKGAVSADNSHKVTFTPNGCMFLT 1413
Query: 1348 PKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ--ILHRIFNARQLALKLIANVTYGYT 1405
P R+G++P +L +L TR +++A+K++A Q + ++F +Q A+KL+AN TYGY+
Sbjct: 1414 PDTREGIMPIMLRALLKTRFEIQEALKQVAVPQNDDYMQQVFQEQQEAIKLLANTTYGYS 1473
Query: 1406 AAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
AA +GRMPC E+AD+IV GR TLE+A+ F+N + W A+V+YGDTD
Sbjct: 1474 AASVTGRMPCVEVADAIVMLGRQTLERAMRFINAHPTWNAEVVYGDTD 1521
>gi|156089459|ref|XP_001612136.1| DNA polymerase family B family protein [Babesia bovis]
gi|154799390|gb|EDO08568.1| DNA polymerase family B family protein [Babesia bovis]
Length = 1478
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 240/451 (53%), Gaps = 54/451 (11%)
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERAAHLGI-GLLNDISRTPLESKIAAGDSEISERGI 1095
+ FDP+I+ G+D+ S+G++ RAA +G+ L ISR P + ER I
Sbjct: 651 LFIKFDPNIIYGYDVARSSIGYIQHRAAAIGVPDFLERISRVPPKH----------ERQI 700
Query: 1096 TDNMLAEPVVAESLLAKDA-IIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
TD + + ++A +I+ + + + GR++ ++ + E+ L T+E
Sbjct: 701 TD-------ITTIMTHQNAKLIKGRYKSSSIKPVFCLGRLIFDLADVALRELNLANLTLE 753
Query: 1155 AVAETVLRRKIPSIPFRVLTKWFA----------------SGPGRARY-----RCVEYVV 1193
+ +P L+KW S P Y R + Y++
Sbjct: 754 NIVYNQFDYLMPVYSQYTLSKWLTTSVQLNASNDPSATTESAPKHGSYKPHAYRAIRYML 813
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
R L M++L + R + ++++G+D S + RGSQY VES+LLR + YL SP
Sbjct: 814 FRNYAVLATMDKLVYLRRYATFSKLYGLDIKSAIVRGSQYHVESVLLRFTKSYGYLLPSP 873
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
QV Q +P+VM+P+SG + PV +LDFQSLY + IAYN+C+ TCLG + K
Sbjct: 874 TQRQVHEQRPSVAIPIVMQPQSGLHLAPVAILDFQSLYSCITIAYNICYSTCLGLLSEHK 933
Query: 1314 ENT----LGVSSFRPDLHVLRDLKDE-------LLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
+N+ LG+ ++ P+ +L D+ + + I PNGVM+V +VR+G+LP +L+ +
Sbjct: 934 KNSGSIKLGIMTYYPEEGILEDITEHRTDKGIGVHITPNGVMFVDKRVREGILPMMLKVV 993
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L +R +K+A+K+ LH++ + Q LK+++N++ G TA+ +SGRMPC++LA+S+
Sbjct: 994 LQSRRKIKEAMKQPDMDAISLHKL-DREQHGLKMLSNLSVGLTASSYSGRMPCSDLAESV 1052
Query: 1423 VQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
V R+ + V+ N + A+VIYGDTD
Sbjct: 1053 VSIARALILHCREIVHNN--FDAEVIYGDTD 1081
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 12 SVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLY 71
+V++V D+ M+ P +D +S G V VPVIR++GSTPAGQ+ CLH+H LPY Y
Sbjct: 15 AVQLVYHDYVMSRPTE-FDPHHSD-TGDVVTHVPVIRIFGSTPAGQQVCLHVHGYLPYFY 72
Query: 72 V 72
+
Sbjct: 73 L 73
Score = 46.6 bits (109), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 132 LQPHESHIPFLLQFLVDYNLYGMGHLHLSK-LKFRHPVP 169
LQP+E HI + + F+ DYNL GM +++LS +K R P+P
Sbjct: 234 LQPYEVHISYFMHFMSDYNLRGMDYVYLSSAIKIRQPIP 272
>gi|407039462|gb|EKE39667.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba nuttalli
P19]
Length = 1385
Score = 241 bits (614), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/433 (33%), Positives = 220/433 (50%), Gaps = 64/433 (14%)
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND-ISRTPLES 1081
+C E+ LF IKI+ D D++M D ++ F+ ER G ND I+R
Sbjct: 663 ICHNELSLFISLIKIINDEDADMIMAEDC-SFTIQFINERYKLYKQGSFNDKINRL---- 717
Query: 1082 KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRL 1141
+G + GR+VL++W +
Sbjct: 718 -------------------------------------------QNGKGIKGRLVLDIWHI 734
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
+ K + Y + +A+ V +P++ + R+ C L
Sbjct: 735 YKECSKFSNYETDYIAKQVFNVSLPNVNYLCYNAPEQLLSSFLRFHCC----------LL 784
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQ 1261
+++ INR E A+ + RGSQY+VE L R++ ++ + SP ++Q+ S
Sbjct: 785 LLDYFGYINRIQEFAQFHACPLKGEIERGSQYKVECCLKRVSKSE-FKLFSPSDNQLNSS 843
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP-SKENTLGVS 1320
A +C+ LVMEP+SGF+++PV+VLDF S+YP+ IAYN+C+ TCLG + S E +G
Sbjct: 844 RATDCVALVMEPQSGFHSNPVIVLDFLSMYPTTAIAYNICYSTCLGYVDDISTERKIGPM 903
Query: 1321 SFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ 1380
++ + L LK + + NG+M+V VRKG+LP +LEE+LSTR +K+ +K
Sbjct: 904 TYSFEKENLNTLKGNIHVVANGIMFVDACVRKGILPIMLEEMLSTRQHIKERMKMFTKGS 963
Query: 1381 QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN 1440
+ + F +QLALKL+ NV YGYT AG SGRMPC E+AD+IV+ R TLEKAI+F
Sbjct: 964 EAYKKCF-LQQLALKLLCNVVYGYTGAGLSGRMPCNEIADAIVETARQTLEKAINFA--E 1020
Query: 1441 EKWKAKVIYGDTD 1453
K+ KVIY DTD
Sbjct: 1021 RKFGGKVIYSDTD 1033
>gi|167390088|ref|XP_001739203.1| DNA polymerase zeta catalytic subunit [Entamoeba dispar SAW760]
gi|165897180|gb|EDR24417.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba dispar
SAW760]
Length = 1384
Score = 240 bits (613), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/345 (38%), Positives = 198/345 (57%), Gaps = 16/345 (4%)
Query: 1110 LAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIP 1169
L K D+ R +G V GR+VLN+W + + K + Y + +A+ V +P++
Sbjct: 704 LYKQGSFNDKINRLQ-NGKGVKGRLVLNIWHIYKECSKFSNYETDYIAKQVFNVSLPNVN 762
Query: 1170 FRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSR 1229
+ R+ C L +++ D INR E A+ + R
Sbjct: 763 YLCYNASEQLLSSFLRFHCC----------LLLLDYFDYINRIQEFAQFHACPLKGEIER 812
Query: 1230 GSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQS 1289
GSQY+VE L R++ + + SP ++Q++S A +C+ LVMEP+SGF+++PV+VLDF S
Sbjct: 813 GSQYKVECCLKRVSKNE-FKLFSPSDNQLSSSRATDCVALVMEPQSGFHSNPVIVLDFLS 871
Query: 1290 LYPSMMIAYNLCFCTCLGKILP-SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPP 1348
+YP+ IAYN+C+ TCLG + + E +G ++ + L LK + + NG+M+V
Sbjct: 872 MYPTTAIAYNICYSTCLGYVDDINIERKIGPMTYSFEKENLNTLKGNIHVVANGIMFVNA 931
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAG 1408
+RKG+LP +LEE+LSTR +K+ +K + + F +QLALKL+ NV YGYT AG
Sbjct: 932 CLRKGILPIMLEEMLSTRQHIKEIMKVFTKGTEEYKKCF-LQQLALKLLCNVVYGYTGAG 990
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
SGRMPC E+AD+IV+ R TLEKAI+F K+ KVIY DTD
Sbjct: 991 LSGRMPCNEIADAIVETARQTLEKAINFA--ERKFGGKVIYSDTD 1033
>gi|268572035|ref|XP_002641217.1| Hypothetical protein CBG09081 [Caenorhabditis briggsae]
Length = 544
Score = 239 bits (609), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/257 (52%), Positives = 166/257 (64%), Gaps = 14/257 (5%)
Query: 1215 LARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPE 1274
+ARV+GI F V +RGSQ RVESMLLRLAH N++A S + Q + E L L++EP+
Sbjct: 1 MARVYGIQFHEVWTRGSQLRVESMLLRLAHRMNFVAPSVTHLQRNMMGSPEQLQLILEPQ 60
Query: 1275 SGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL----------PSKENTLGVSSFRP 1324
S Y DPV+VLDFQSLYPSM+IAYN C+ T LGKI +E LG + P
Sbjct: 61 SKVYFDPVIVLDFQSLYPSMVIAYNYCYSTILGKIANLNAMSNESKNREEIILGAIKYHP 120
Query: 1325 DLHVLRDL--KDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQI 1382
+ L L E+ P M+V R+GVLP LL EILS RIMVK AIK+ +
Sbjct: 121 SKNDLVKLVAYKEVCASPLAAMFVKKSKREGVLPLLLREILSARIMVKNAIKRTKSKK-- 178
Query: 1383 LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEK 1442
L RI +ARQLALKL+ANV+YGYTAA +SGRMPCAELAD+I+ GR TLE+AI V +
Sbjct: 179 LKRILDARQLALKLVANVSYGYTAANWSGRMPCAELADAILGKGRETLERAIEMVQRGDY 238
Query: 1443 WKAKVIYGDTDRYTVCI 1459
++VIYGDTD V +
Sbjct: 239 GGSEVIYGDTDSLFVLV 255
>gi|67482945|ref|XP_656768.1| DNA polymerase zeta catalytic subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473989|gb|EAL51383.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 1385
Score = 237 bits (605), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 221/433 (51%), Gaps = 64/433 (14%)
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND-ISRTPLES 1081
+C E+ LF+ IKI+ D D+++ D ++ F+ ER G ND I+R
Sbjct: 663 ICHNELSLFNSLIKIINDEDADMIIAEDC-SFTIQFINERYKLYKQGSFNDKINRL---- 717
Query: 1082 KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRL 1141
+G + GR+VL++W +
Sbjct: 718 -------------------------------------------QNGKGIKGRLVLDMWHI 734
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
+ K + Y + +A+ V +P++ + R+ C L
Sbjct: 735 YKECSKFSNYETDYIAKQVFNVSLPNVNYLCYNAPEQLLNSFLRFHCC----------LL 784
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQ 1261
+++ INR E A+ + RGSQY+VE L R++ ++ + SP ++Q+ S
Sbjct: 785 LLDYFGYINRIREFAQFHSCPLKGEIERGSQYKVECYLKRVSKSE-FKLFSPSDNQLNSS 843
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP-SKENTLGVS 1320
A +C+ LVMEP+SGF+++PV+VLDF S+YP+ IAYN+C+ TCLG + + E +G
Sbjct: 844 RATDCVALVMEPQSGFHSNPVIVLDFLSMYPTTAIAYNICYSTCLGYVDDINIERKIGPM 903
Query: 1321 SFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ 1380
++ + L LK + + NG+M+V VRKG+LP +LEE+LSTR +K+ +K
Sbjct: 904 TYSFEKENLHTLKGNIHVVANGIMFVDACVRKGILPIMLEEMLSTRQHIKERMKMFTKGS 963
Query: 1381 QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN 1440
+ + F +QLALKL+ NV YGYT AG SGRMPC E+AD+IV+ R TLEKAI+F
Sbjct: 964 EAYKKCF-LQQLALKLLCNVVYGYTGAGLSGRMPCNEIADAIVETARQTLEKAINFA--E 1020
Query: 1441 EKWKAKVIYGDTD 1453
K+ KVIY DTD
Sbjct: 1021 RKFGGKVIYSDTD 1033
>gi|449707197|gb|EMD46897.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba
histolytica KU27]
Length = 1385
Score = 237 bits (605), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 221/433 (51%), Gaps = 64/433 (14%)
Query: 1023 VCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND-ISRTPLES 1081
+C E+ LF+ IKI+ D D+++ D ++ F+ ER G ND I+R
Sbjct: 663 ICHNELSLFNSLIKIINDEDADMIIAEDC-SFTIQFINERYKLYKQGSFNDKINRL---- 717
Query: 1082 KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRL 1141
+G + GR+VL++W +
Sbjct: 718 -------------------------------------------QNGKGIKGRLVLDMWHI 734
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
+ K + Y + +A+ V +P++ + R+ C L
Sbjct: 735 YKECSKFSNYETDYIAKQVFNVSLPNVNYLCYNAPEQLLNSFLRFHCC----------LL 784
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQ 1261
+++ INR E A+ + RGSQY+VE L R++ ++ + SP ++Q+ S
Sbjct: 785 LLDYFGYINRIREFAQFHSCPLKGEIERGSQYKVECYLKRVSKSE-FKLFSPSDNQLNSS 843
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP-SKENTLGVS 1320
A +C+ LVMEP+SGF+++PV+VLDF S+YP+ IAYN+C+ TCLG + + E +G
Sbjct: 844 RATDCVALVMEPQSGFHSNPVIVLDFLSMYPTTAIAYNICYSTCLGYVDDINIERKIGPM 903
Query: 1321 SFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ 1380
++ + L LK + + NG+M+V VRKG+LP +LEE+LSTR +K+ +K
Sbjct: 904 TYSFEKENLHTLKGNIHVVANGIMFVDACVRKGILPIMLEEMLSTRQHIKERMKMFTKGS 963
Query: 1381 QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN 1440
+ + F +QLALKL+ NV YGYT AG SGRMPC E+AD+IV+ R TLEKAI+F
Sbjct: 964 EAYKKCF-LQQLALKLLCNVVYGYTGAGLSGRMPCNEIADAIVETARQTLEKAINFA--E 1020
Query: 1441 EKWKAKVIYGDTD 1453
K+ KVIY DTD
Sbjct: 1021 RKFGGKVIYSDTD 1033
>gi|406696979|gb|EKD00249.1| hypothetical protein A1Q2_05426 [Trichosporon asahii var. asahii CBS
8904]
Length = 564
Score = 226 bits (577), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 146/210 (69%), Gaps = 2/210 (0%)
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
++P QV Q A +PL+ EPES +Y P++VLDFQSLYPS+MIAYN+C+ TCLG++
Sbjct: 2 VTPSKQQVGLQNAPFAVPLIHEPESKYYNHPIIVLDFQSLYPSVMIAYNICYSTCLGRVE 61
Query: 1311 PSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K N G + + +L LKD L + PNG+++V P VRK +L ++L EIL TR+MV
Sbjct: 62 QFKGTNKFGFTELKVPDGLLELLKDYLTVTPNGMIFVKPAVRKSLLAKMLGEILDTRVMV 121
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
KQA+K ++ L ++ NARQL LKL+ANVTYGYT+A +SGRMPC E+ADSIVQ GR T
Sbjct: 122 KQAMKGYRDNKS-LTQMLNARQLGLKLMANVTYGYTSATYSGRMPCIEIADSIVQTGRET 180
Query: 1430 LEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
LEKA +N KW A V+YGDTD V +
Sbjct: 181 LEKAQELINSEAKWGATVVYGDTDSLFVAL 210
>gi|401881075|gb|EJT45380.1| zeta DNA polymerase [Trichosporon asahii var. asahii CBS 2479]
Length = 564
Score = 226 bits (576), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 146/210 (69%), Gaps = 2/210 (0%)
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
++P QV Q A +PL+ EPES +Y P++VLDFQSLYPS+MIAYN+C+ TCLG++
Sbjct: 2 VTPSKQQVGLQNAPFAVPLIHEPESKYYNHPIIVLDFQSLYPSVMIAYNICYSTCLGRVE 61
Query: 1311 PSK-ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K N G + + +L LKD L + PNG+++V P VRK +L ++L EIL TR+MV
Sbjct: 62 QFKGTNKFGFTELKVPDGLLELLKDYLTVTPNGMIFVKPAVRKSLLAKMLGEILDTRVMV 121
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
KQA+K ++ L ++ NARQL LKL+ANVTYGYT+A +SGRMPC E+ADSIVQ GR T
Sbjct: 122 KQAMKGYRDNKS-LTQMLNARQLGLKLMANVTYGYTSATYSGRMPCIEIADSIVQTGRET 180
Query: 1430 LEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
LEKA +N KW A V+YGDTD V +
Sbjct: 181 LEKAQELINSEAKWGATVVYGDTDSLFVAL 210
>gi|294947021|ref|XP_002785235.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239898897|gb|EER17031.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 729
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 157/229 (68%), Gaps = 6/229 (2%)
Query: 1226 VLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVL 1285
VL+RGSQYRVE +L R A + +S QV +QPA+E +P+V+EP SG+Y P ++L
Sbjct: 1 VLTRGSQYRVECILHRAASRTGFGLVSSSKAQVKAQPALEGVPMVLEPRSGYYRTPTIIL 60
Query: 1286 DFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMY 1345
DFQSLYPS++IAYN+CF TCLG++ ++ T+ + + R + + + D +++ NG ++
Sbjct: 61 DFQSLYPSIIIAYNMCFSTCLGRV-EHQDLTVALGTQRDKPYTV-TMDDNVVVAANGAVF 118
Query: 1346 VPPKVRKGVLPRLLEEILSTRIMVKQAIKKL-APSQQILHRIFNARQLALKLIANVTYGY 1404
V P R G+LPR+L E+L TR MVK+A+K + + L+RI +ARQL LKL+ANVTYGY
Sbjct: 119 VQPSCRVGILPRMLHEVLQTRFMVKRAMKSVNSGDSPALYRIMDARQLGLKLLANVTYGY 178
Query: 1405 TAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
A +SGRMPC+ELAD+IV R TL+ A+S E A V YGDTD
Sbjct: 179 AGASYSGRMPCSELADAIVMTARRTLQHAMSVA---EDMGATVFYGDTD 224
>gi|237838597|ref|XP_002368596.1| DNA polymerase zeta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|211966260|gb|EEB01456.1| DNA polymerase zeta catalytic subunit, putative [Toxoplasma gondii
ME49]
Length = 3952
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/332 (38%), Positives = 192/332 (57%), Gaps = 61/332 (18%)
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
++Y++GR ++ L +++ +++ RT+ELAR++G DFFS L+RGSQ++VES++++ +Y
Sbjct: 2883 LKYLLGRVRMTLALIDSTELLPRTAELARLYGCDFFSALTRGSQFKVESVMIQATKRLDY 2942
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG- 1307
L +SP QV QPA C+PLV+EP+SGFY PV+VLDF+SLYPS++IA N+C+ T LG
Sbjct: 2943 LFVSPSQTQVTEQPAPLCIPLVLEPKSGFYWSPVLVLDFRSLYPSIVIANNICYSTALGS 3002
Query: 1308 -KILPSKE--NTLGVSSFRPDLHVLRDLKDELLIPPN-----GVMYVPPKV-----RKG- 1353
+I P+ + TLGV F + R + + + G +P V RKG
Sbjct: 3003 VEIDPTVQATKTLGVMDFHCPPALFRQISEAYYRAASVDLRKGAPALPDPVGGAGERKGG 3062
Query: 1354 -----------------------------VLPR------------LLEEILS----TRIM 1368
+LP + ++LS TRIM
Sbjct: 3063 RDSGERRGHSQASSFCASQAWDADSGGLRLLPSGAMFVSRRVRKGIFPQVLSEILQTRIM 3122
Query: 1369 VKQAIKKL-APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
V++AIKK ++ L R+ N RQ LK+IANV+YGYTAA F+G MPCA++AD+IVQ R
Sbjct: 3123 VQKAIKKYKGKVEEGLLRLLNYRQYGLKMIANVSYGYTAASFTGHMPCADIADAIVQTAR 3182
Query: 1428 STLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
+TL +AI V+ +W +V+YGDTD V +
Sbjct: 3183 TTLMRAIELVHNTPRWGGRVLYGDTDSMFVLV 3214
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 85/222 (38%), Gaps = 39/222 (17%)
Query: 1003 YCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER 1062
+ KS Q D +V E L + I DP +++ WD LGFL R
Sbjct: 2540 FTKSAQQQLPAFLPSDTEVVAVESERALIHYVCLIFSVADPSMVLQWDSGCMGLGFLLRR 2599
Query: 1063 AAHLGIGL-----------------LNDISRTPLES-KIAAGDSEISERGITDNMLAEPV 1104
A LG G L IS P I+ + +S++ + P
Sbjct: 2600 ARVLGFGAELTTALGRRADPLLLSHLRSISYRPRSHVAISVSPAPVSQQSFGSVSSSSPA 2659
Query: 1105 V--AESLLA----KDAIIED---------EWGRTHA------SGLHVGGRIVLNVWRLMR 1143
+ AES A + +I + E GR+ G + GR++L WRL++
Sbjct: 2660 LPQAESTSASSWSRPSITDHREARHPTPRESGRSSGVSDVLLQGGMLSGRLLLECWRLLQ 2719
Query: 1144 GEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
EVKL ++E VA VL S+P +L + G G R
Sbjct: 2720 SEVKLQQSSLEGVATEVLGVTFASVPPAILANLWKQGQGALR 2761
>gi|385301007|gb|EIF45240.1| dna polymerase zeta subunit [Dekkera bruxellensis AWRI1499]
Length = 865
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 200/386 (51%), Gaps = 40/386 (10%)
Query: 945 FQDPASAGAGE--QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSD----HAVEI 998
F++P + L L +E+ + DL+PDP D I + F+ + +
Sbjct: 480 FEEPIERKSTHFAXLITLIMELHINTXKDLQPDPAKDXIGAIFWNFDKSHNPYPLNLPXA 539
Query: 999 YVLLYCKSESHQRSLVG-IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLG 1057
+ L + H G I + + + +E + S + ++ DPDIL G++I S G
Sbjct: 540 GIFLLRNNTXHMDIDWGNILNIPIRIFDEEEEMISSLVGLVELVDPDILSGYEIHAASWG 599
Query: 1058 FLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIE 1117
+L ER ++ DI T S++
Sbjct: 600 YLIERCK-----IVYDIDLTIRLSRVCQKQRNKXX------------------------- 629
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
D WG THAS + + GR +LN+WR +R E L Y+VE V VL R+IP LT+WF
Sbjct: 630 DRWGYTHASAIRITGRHMLNIWRQLRREXNLGSYSVENVTFQVLGRRIPHYSTETLTQWF 689
Query: 1178 ASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVES 1237
+ + + Y R + EI+ +L++I + +E +R+ GIDF+SV+ RGSQY+VES
Sbjct: 690 TNNNPNSLSSLIWYYYHRIIIEGEIIEKLEIIEKITEQSRLLGIDFYSVIYRGSQYKVES 749
Query: 1238 MLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIA 1297
+L+RLA ++Y+ ISP QV +Q ++EC+PLV+EPES Y P+VVLDFQSLYPS++IA
Sbjct: 750 LLVRLAKAEDYILISPSKKQVFNQDSLECIPLVLEPESALYRSPLVVLDFQSLYPSIIIA 809
Query: 1298 YNLCFCTCLGKIL---PSKENTLGVS 1320
YN CF T LGK+ P + LGV+
Sbjct: 810 YNYCFSTLLGKMRDYKPGRYQKLGVT 835
>gi|405950503|gb|EKC18487.1| DNA polymerase zeta catalytic subunit [Crassostrea gigas]
Length = 3716
Score = 212 bits (539), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 152/291 (52%), Gaps = 79/291 (27%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G+ D V E LF +K+ +DPDIL+G++IQ S G+L +RA+ L + L +
Sbjct: 3477 GVDDLDVVYVENEEELFMEVLKLFSRWDPDILVGFEIQKFSWGYLLQRASQLSVNLCAQM 3536
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
SR P E K ++ +E DEWG H+S +H+ GR+
Sbjct: 3537 SRIPDEKKKSSFKAE---------------------------SDEWGSDHSSEIHIAGRV 3569
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+LN+WR++
Sbjct: 3570 ILNLWRII---------------------------------------------------- 3577
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
R + NL++++QLD+I RTSE ARVFGI+F+ VLSRGSQYRVESM+LRLA N++ SP
Sbjct: 3578 RHEGNLKVIDQLDLIGRTSEFARVFGIEFYHVLSRGSQYRVESMMLRLAKPMNFIPASPS 3637
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
Q A A EC+ L +EPES FYADPVVV+DFQSLYPS+MIA+N CF TC
Sbjct: 3638 VQQRARMRAPECIALTLEPESRFYADPVVVVDFQSLYPSIMIAHNYCFSTC 3688
Score = 162 bits (411), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 11/169 (6%)
Query: 8 SNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
S++F+VRIV+ DHY PPIPG D+ Y+ + V +VPVIRV+GSTP GQK C+H+H
Sbjct: 44 SSMFAVRIVTTDHYQGPPIPGLDVQYADFRASVVKKVPVIRVFGSTPQGQKACMHVHGVF 103
Query: 68 PYLYVPCADIPVQLRQEDDGYMHAISLALEKALKV-KGSAGSKRQHVHECSLVRAKK--- 123
PYLYV Q D Y+ + +L+KA+ V +G+A ++ QHV++ ++V
Sbjct: 104 PYLYVLYDGT-----QPWDRYLRLFANSLDKAINVAQGNASAETQHVYKINMVSGIAADL 158
Query: 124 --GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPD 170
GGAV +K QPHESHIP+ LQ +DYNLYGM L+++ +KFR D
Sbjct: 159 LLGGAVLNKGFQPHESHIPYTLQMFIDYNLYGMNMLNVAAVKFRRKAQD 207
>gi|313225135|emb|CBY20928.1| unnamed protein product [Oikopleura dioica]
Length = 673
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 238/503 (47%), Gaps = 54/503 (10%)
Query: 960 LSIEVQAESRGDLRPDPRYDSINVVALA-FENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+ IEV + R +L DP+ D + V L+ F +D D E +VL Y + ++ D
Sbjct: 98 VCIEVFSNGRHNLPQDPKEDPVTAVCLSYFHSDDDIEDETWVL-YTRDKNPDSGRYD-AD 155
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN---DIS 1075
+ C EI L+ HF +I S DPDI++GW+I+ SLGFL RA G+G ++S
Sbjct: 156 TRYLFCKNEIDLYEHFCRIFQSLDPDIILGWEIRRRSLGFLVHRAIK-GLGWKKFGLNLS 214
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
RT D E+ + N + GR V
Sbjct: 215 RT-----FGQNDKSYFEKAMNLN-----------------------------FSIDGRTV 240
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIP-FRVLTKWFA-SGPGRARYRCVEYVV 1193
L WRL E+ L + EA A VL + P++ ++ T W + S P + + Y+
Sbjct: 241 LEFWRLAADELSLRSTSFEAAAFEVLGERTPTMKRIKMRTLWNSQSWP-----KVLTYLK 295
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
R ++ ++ ++ E+A + + L+RG Q R E + + SP
Sbjct: 296 SRTDKLASMIRKMGLLEIGYEVAGIANVSVKDALTRGCQVRHEGIFGTCCSYLEMVMDSP 355
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
+V A E + L +EPESG Y V VLDF SLYP+++IA N+C+ T +G +
Sbjct: 356 TEAEVRESKAGEQMALNLEPESGLYKRGVAVLDFTSLYPTVIIAQNMCYTTIVGNYKDHQ 415
Query: 1314 E---NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
+ +G H +DE+ +V + R G++P++ ++LS R +K
Sbjct: 416 DEEPQNVGTKMNWTMAHWELPDEDEIHSTSTNCAFVNKEKRVGIMPQVQTQLLSKRQAIK 475
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+ +K S + L ++ ++RQ ALK+IAN YGYT AGFSGRMP LA++IV R
Sbjct: 476 KLMKTGEHSSRDL-KMLDSRQHALKMIANTMYGYTDAGFSGRMPNRHLAEAIVGDARGLT 534
Query: 1431 EKAISFVNENEKWKAKVIYGDTD 1453
E+A + E + KV+YGDTD
Sbjct: 535 ERAA--IACKEMFGKKVVYGDTD 555
>gi|313240134|emb|CBY32486.1| unnamed protein product [Oikopleura dioica]
Length = 922
Score = 207 bits (528), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 238/503 (47%), Gaps = 54/503 (10%)
Query: 960 LSIEVQAESRGDLRPDPRYDSINVVALA-FENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+ IEV + R +L DP+ D + V L+ F +D D E +VL Y + ++ D
Sbjct: 98 VCIEVFSNGRHNLPQDPKEDPVTAVCLSYFHSDDDIEDETWVL-YTRDKNPDSGRYD-AD 155
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN---DIS 1075
+ C EI L+ HF +I S DPDI++GW+I+ SLGFL RA G+G ++S
Sbjct: 156 TRYLFCKNEIDLYEHFCRIFQSLDPDIILGWEIRRRSLGFLVHRAIK-GLGWKKFGLNLS 214
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
RT D E+ + N + GR V
Sbjct: 215 RT-----FGQNDKSYFEKAMNLN-----------------------------FSIDGRTV 240
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIP-FRVLTKWFA-SGPGRARYRCVEYVV 1193
L WRL E+ L + EA A VL + P++ ++ T W + S P + + Y+
Sbjct: 241 LEFWRLAADELSLRSTSFEAAAFEVLGERTPTMKRIKMRTLWNSQSWP-----KVLTYLK 295
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
R ++ ++ ++ E+A + + L+RG Q R E + + SP
Sbjct: 296 SRTDKLASMIRKMGLLEIGYEVAGIANVSVKDALTRGCQVRHEGIFGTCCSYLEMVMDSP 355
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
+V A E + L +EPESG Y V VLDF SLYP+++IA N+C+ T +G +
Sbjct: 356 TEAEVRESKAGEQIALNLEPESGLYKRGVAVLDFTSLYPTVIIAQNMCYTTIVGNYKDHQ 415
Query: 1314 E---NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
+ +G H +DE+ +V + R G++P++ ++LS R +K
Sbjct: 416 DEEPQNVGTKMNWTMAHWELPDEDEIHSTSTNCAFVNKEKRVGIMPQVQTQLLSKRQAIK 475
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+ +K S + L ++ ++RQ ALK+IAN YGYT AGFSGRMP LA++IV R
Sbjct: 476 KLMKTGEHSSRDL-KMLDSRQHALKMIANTMYGYTDAGFSGRMPNRHLAEAIVGDARGLT 534
Query: 1431 EKAISFVNENEKWKAKVIYGDTD 1453
E+A + E + KV+YGDTD
Sbjct: 535 ERAA--IACKEMFGKKVVYGDTD 555
>gi|324120758|dbj|BAJ78770.1| DNA polymerase delta catalytic subunit [Eretes sticticus]
Length = 998
Score = 206 bits (525), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 153/542 (28%), Positives = 260/542 (47%), Gaps = 78/542 (14%)
Query: 936 KPTPLSQI-------GFQDPASAGAGEQLT---LLSIEVQAESRGDLRPDPRYDSI---- 981
+PT L QI F A GA + +LS +++ R + P+P+ D +
Sbjct: 177 QPTTLCQIEIDVAYDAFIAHAPEGAWAHVAPFKILSFDIECAGRRGIFPEPKIDPVIQIA 236
Query: 982 NVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSF 1041
NVV L +++ H V ++ L C +G + + F E L + + +
Sbjct: 237 NVVRLHGADENLH-VNVFTLNSCAP-------IGHAEVRCF--ETEYELLEAWGQFVRDI 286
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLA 1101
DPD+ G++I +L RA HL + + R L++ + A
Sbjct: 287 DPDLFTGYNINDFDFPYLLNRAEHLKVKNFPYLGR--LKNVLTA---------------- 328
Query: 1102 EPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
K+ I + ++G+ ++ GRI+ ++ +M+ + KL YT+ V++ +L
Sbjct: 329 ---------VKENINQTKFGKRTFITINFEGRILYDMLVVMKRDFKLRSYTLNNVSQEIL 379
Query: 1162 RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
+ + + ++T +G + R R Y V A L L ++N + E+ARV G+
Sbjct: 380 GEQKEDVHYSIITD-LQNGDEQTRRRLAVYCVKDADLPLRLLNHVKSFTNDIEMARVTGV 438
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADP 1281
S+L++G Q +V + LLR A NY + Q S+ + E V+EP G+Y DP
Sbjct: 439 PLTSLLTKGEQVKVVAQLLRHARAHNYF-MPAVQGQANSEQSYEG-ATVIEPVRGYYTDP 496
Query: 1282 VVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPN 1341
+ LDF SLYPS+MIA+NLC+ T + K+ K LG+++ D++ P
Sbjct: 497 IATLDFSSLYPSIMIAHNLCYTTLINKVTKDK---LGLTN------------DQITETPA 541
Query: 1342 GVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVT 1401
G ++V VR+G+LP++L+ +LS R K +K + ++ + + +QLALK+ AN
Sbjct: 542 GHLFVKSTVREGLLPQILQSLLSARKRTKAELKN--ATDPVIRSVLDGKQLALKISANSV 599
Query: 1402 YGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV------NENEKWKAKVIYGDTDRY 1455
YG+T A G++PC E++ S+ GR+ +E+ V N + +KVIYGDTD
Sbjct: 600 YGFTGATV-GKLPCLEISGSVTAYGRTMIEQTKQLVEQHYCLNNGYESDSKVIYGDTDSV 658
Query: 1456 TV 1457
V
Sbjct: 659 MV 660
Score = 40.8 bits (94), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 34 SSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQLRQED 85
+ + G + VP++R++G T G C HIH PY +V IP ++ D
Sbjct: 6 AGMPGAQTGPVPIMRMFGVTAEGNSVCCHIHGFSPYFFV---SIPNNFKESD 54
>gi|324120754|dbj|BAJ78768.1| DNA polymerase delta catalytic subunit [Chrysoperla nipponensis]
Length = 1052
Score = 205 bits (521), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/506 (29%), Positives = 247/506 (48%), Gaps = 62/506 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
LS +++ ++R + P+P +D++ +A + D A IY +Y +S I
Sbjct: 260 FLSFDIECDNRKGIFPEPEHDAVIQIANVVQRHGD-AQPIYCNVYT-----LKSCAPIAH 313
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
+VF KE + + + + + DPD++ G++I L +L RA L + + P
Sbjct: 314 AEVFSFEKEGDMLNAWAEFVRKLDPDVVTGYNINNFDLPYLTNRAKTL------KLDKFP 367
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
++ S + E+ +L GR +++ GR+ ++
Sbjct: 368 FLGRLKNVVSVVREKVTQSKLL--------------------GRREYKYVNMEGRLPYDM 407
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
+ R +L YT+ VA+ +L ++ + ++ F +G + R+R Y + A+L
Sbjct: 408 LIVARRNCRLRSYTLNNVAQELLGQQKEDVHHTQISDLF-NGDEQTRHRLAVYCIKDAQL 466
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
L I+N L+ ELARV G+ +++RG Q +V + LL A YL P
Sbjct: 467 PLRILNHLNSFTNDMELARVSGVTINLLMTRGEQIKVVTQLLSQAQAAGYLM--PVYKGQ 524
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLG 1318
+ E V+EP G+Y DP+ LDF SLYPS+M+A+NLC+ T L PS ++ G
Sbjct: 525 GTDDQFEG-ATVIEPVRGYYTDPIATLDFNSLYPSIMMAHNLCYTTLLH---PSNKDKFG 580
Query: 1319 VSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL-A 1377
++ +D++ P+ +V P VR+G+LP +LE +L+ R K+A K+L A
Sbjct: 581 LT------------EDQITKTPSNHFFVKPTVRRGLLPYILENLLAAR---KKAKKELEA 625
Query: 1378 PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
+ + + N RQLALKL AN YG+T A +G++PC E++ S+ GR+ +E+ V
Sbjct: 626 ETDPVKKSVLNGRQLALKLSANSVYGFTGAQ-NGKLPCLEISGSVTAFGRTMIERTRQEV 684
Query: 1438 NEN------EKWKAKVIYGDTDRYTV 1457
E + A+VIYGDTD V
Sbjct: 685 EEKYTMANGYEHNAQVIYGDTDSVMV 710
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 39/197 (19%)
Query: 5 QPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
+P+ + F + + ++HY + +PG + G + V VIR++G T G H+H
Sbjct: 32 KPEKDKFIFQQIDVEHYNSQYLPG-------MPGPQSGGVAVIRMFGITMDGHSVLCHVH 84
Query: 65 RALPYLYVPCADI-------PVQ----------LRQEDDGYMHAIS-LALEKALKVKGSA 106
L Y YV + P + ++ DG + + L + L ++G
Sbjct: 85 GFLHYFYVVVPNAFDETHIKPFKEALNTVMMQDMKNNSDGVKECVQDVKLVEKLNLQGYV 144
Query: 107 GSKRQHVHE--CSLVRAKKGGA-------VFDK----SLQPHESHIPFLLQFLVDYNLYG 153
G +Q + +L + GA V+DK QP ES++ F ++F+VD ++ G
Sbjct: 145 GDTKQKFAQIFVTLPKMVAAGARLLREAKVYDKFGYHDYQPFESNVDFDIRFMVDKHVKG 204
Query: 154 MGHLHLSKLKFRH-PVP 169
+ L +RH P P
Sbjct: 205 CCWIELPSGTWRHRPSP 221
>gi|324120734|dbj|BAJ78758.1| DNA polymerase delta catalytic subunit [Gynaikothrips ficorum]
Length = 1091
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/511 (28%), Positives = 245/511 (47%), Gaps = 68/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D + +A + + ++D + ++ L C +
Sbjct: 297 FRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEADPFIRNVFTLDTCAP------I 350
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V C E +F+ + + DPDI G++I +L RA HL +
Sbjct: 351 VG---CQVISCKTEAEMFTKWSDFVREVDPDIFTGYNIGNFDFPYLINRAEHLKVKPF-- 405
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
P +I +S++ + + GR ++ GR
Sbjct: 406 ----PFLGRIKN--------------------IQSVVKESQFFSKQMGRRENKSINTEGR 441
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ + KL YT+ +V+ L+ + + V+T +G + R R Y +
Sbjct: 442 VAFDLLLILVRDYKLRSYTLNSVSYHFLQEQKEDVHHSVITD-LQNGTPQTRRRLAVYCL 500
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L + ++ +L I E+ARV G+ S+L+RG Q +V S LLR A +++ I P
Sbjct: 501 KDAYLPIRLLEKLMCIINYMEMARVTGVTLASLLTRGQQIKVMSQLLRKAREKDF--IMP 558
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+ T L L +
Sbjct: 559 TYQSTGGDDQYEG-ATVIEPKRGYYADPISTLDFSSLYPSIMMAHNLCYTTLL---LGNA 614
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+ LG+S+ D+ P +V P VRKG+LP +L+++LS R K +
Sbjct: 615 KERLGLSA------------DQYSKTPANNFFVKPSVRKGLLPEILDDLLSARKKAKSDL 662
Query: 1374 K-KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
K + P +Q R+ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 663 KNEKDPFKQ---RVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIEQ 718
Query: 1433 AISFVNEN------EKWKAKVIYGDTDRYTV 1457
+ V E K A VIYGDTD V
Sbjct: 719 TKTNVEEKYRIENGYKHDAVVIYGDTDSVMV 749
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 5 QPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
+P + + + +DHY P+PG + G KV VPV+R++G T +G C H+H
Sbjct: 73 RPSDDNLVFQQIDVDHYTGQPLPG-------MPGAKVGPVPVMRLFGVTSSGNSVCCHVH 125
Query: 65 RALPYLYV 72
PY +V
Sbjct: 126 GFTPYFFV 133
>gi|324120712|dbj|BAJ78747.1| DNA polymerase delta catalytic subunit [Nomadacris japonica]
Length = 1092
Score = 202 bits (515), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 157/554 (28%), Positives = 262/554 (47%), Gaps = 76/554 (13%)
Query: 926 SQISGPDGRSKPTPLSQ----------IGFQD-PASAGAGEQ-----LTLLSIEVQAESR 969
S + P G+ +P P Q I ++D A GE +LS +++ R
Sbjct: 254 SWVQLPAGKWRPRPTKQVQSRCQIXVDISWEDLIAHPPEGEWSKVAPFRILSFDIECAGR 313
Query: 970 GDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIH 1029
+ P+P +D + +A +H + ++ + + +VG CKV KE
Sbjct: 314 KGVFPEPNHDPVIQIANMVIRQGEHEPFLRIVFTLDTCA---PIVG---CKVLSFDKETE 367
Query: 1030 LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSE 1089
+ + + + DPD+ G++I +L RA+HL N + R
Sbjct: 368 MLEKWAEFVREVDPDLFTGYNINNFDFYYLISRASHLNARNFNYLGRI------------ 415
Query: 1090 ISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
N+ + VV E +L + GR ++V GR+ ++ ++ E KL
Sbjct: 416 -------KNI--KSVVKEQVLQ-----SKQMGRRENKNVNVEGRVAFDLLLVLLREYKLR 461
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
YT+ AV+ L+ + + ++T +G + R R Y + A L + ++++L I
Sbjct: 462 SYTLNAVSYHFLQEQKEDVHHNIITD-LQNGNPQTRRRLAVYCLKDAYLPIRLLDKLMCI 520
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
E+ARV G+ S+L+RG Q +V S LLR A +NYL + G A + E
Sbjct: 521 INYMEMARVTGVSLASLLTRGQQIKVVSQLLRKARERNYLMPAYGGG--AQEEQFEG-AT 577
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVL 1329
V+EP+ G+Y+DP+ LDF SLYPS+M+A+NLC+ T L + ++ LG+S
Sbjct: 578 VIEPKKGYYSDPIATLDFSSLYPSIMMAHNLCYTTLLQGV---AKDRLGLSP-------- 626
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
D+ P G +V V KG+LP +LE +LS R K+ +K+ + ++ +
Sbjct: 627 ----DQYTKTPAGNYFVRQSVCKGLLPEILENLLSARKRAKEELKR--ETDPFKKKVLDG 680
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN------EKW 1443
RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+ V ++ +
Sbjct: 681 RQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIEQTKQEVEQHYNIANGYEH 739
Query: 1444 KAKVIYGDTDRYTV 1457
++VIYGDTD V
Sbjct: 740 DSEVIYGDTDSVMV 753
Score = 48.5 bits (114), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 42/193 (21%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + IDHY P+ G + G ++ VP++R+YG T C H+H
Sbjct: 81 PSRDAIEFQQIDIDHYTGSPLTG-------MPGSQLGPVPIMRMYGITMDRNSVCCHVHG 133
Query: 66 ALPYLYVPCAD-----------------IPVQLRQEDDGYMHAISLALE--KALKVKGSA 106
PY +V D + +R + A+ LA+E K + G
Sbjct: 134 FSPYFFVSAPDGFKETHCQSFREALNKAVLADMRSNREEVQQAV-LAVEIVKRQTLFGYH 192
Query: 107 GSKRQHVHECSLV---------RAKKGGAVFDKSLQPH-----ESHIPFLLQFLVDYNLY 152
G Q + ++ R + +F +L PH ES+I F ++F+VD ++
Sbjct: 193 GQDLQTFIKITVALPRLIAPAKRLLEKEVIF-PALGPHQYQAYESNIDFDIRFMVDTHMV 251
Query: 153 GMGHLHLSKLKFR 165
G + L K+R
Sbjct: 252 GCSWVQLPAGKWR 264
>gi|440294351|gb|ELP87368.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba invadens
IP1]
Length = 1288
Score = 201 bits (511), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 200/407 (49%), Gaps = 33/407 (8%)
Query: 1064 AHLGIGLLNDISRT--PLESKIAAGDSEIS--ERGITD-NMLAEPVVAESLLAKDAIIED 1118
H +N+ R + +K DSE+S E +T+ N ++ +V+E + I
Sbjct: 641 VHTSQDTINEFHRNCHDIHTKDCVVDSELSVIETILTEINTDSDIIVSEDISFSMDFISI 700
Query: 1119 EWGRTHAS----------GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSI 1168
W + L GR++L+ W + + +M+ ++ +A L +P +
Sbjct: 701 RWKMSTTKPQETISRLIGSLGSEGRVLLSFWYIYKKCGNYSMFDIQYIAHKELHVFLPQV 760
Query: 1169 PFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLS 1228
+ + C Y+V + R E A +
Sbjct: 761 SHTQFSPLANVVTNFLLFHCSIYLVAK----------FGYFERLKEFATFHSCPLEEEIE 810
Query: 1229 RGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQ 1288
RG+QYRVE L R++ +++ SP + C+PLVMEP GF+ +PVVVLDF
Sbjct: 811 RGTQYRVECCLKRVS--EDFELFSPTPEDLEGSRPTTCVPLVMEPVCGFHENPVVVLDFL 868
Query: 1289 SLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDL--HVLRDLKDELLIPPNGVMYV 1346
S+YP+ MIAYN+C+ TCLG L + + F D L L++ + + NGV++V
Sbjct: 869 SMYPTTMIAYNMCYSTCLG-YLDDFDTHRHIGPFWSDFARTTLSGLENNIHVAANGVIFV 927
Query: 1347 PPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTA 1406
++KGVLP +LEEILSTR VK +K +I N +QLALKL+ NV YGYT
Sbjct: 928 DAILQKGVLPLMLEEILSTRQHVKDELKTCERGSDRNKQI-NTQQLALKLLCNVVYGYTG 986
Query: 1407 AGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
AGF+GRMPC+ +AD+ ++ R TLE+AI +V + VIY DTD
Sbjct: 987 AGFTGRMPCSAIADATIETARQTLERAIEYV--RSVYHFNVIYSDTD 1031
>gi|255716712|ref|XP_002554637.1| KLTH0F09966p [Lachancea thermotolerans]
gi|238936020|emb|CAR24200.1| KLTH0F09966p [Lachancea thermotolerans CBS 6340]
Length = 1095
Score = 200 bits (509), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 163/571 (28%), Positives = 260/571 (45%), Gaps = 96/571 (16%)
Query: 920 DC-LQDISQISGPDGRSKPTPLSQ----------IGFQD-PASAGAGEQ-----LTLLSI 962
DC + +S I+ P+G+ TP +Q I F+D A GE L +LS
Sbjct: 259 DCGITGMSWITLPEGKYSMTPPNQKVSTCQLEVRINFKDLIARPAEGEWSHSAPLRILSF 318
Query: 963 EVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+++ R + P+P D + NVV++A S+S R++ +
Sbjct: 319 DIECSGRVGVFPEPDVDPVIQIANVVSVA----------------GSSKSFIRNVFTVNS 362
Query: 1019 C------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
C ++F E + H+ + + DPD+++G++ L +L +RA L I
Sbjct: 363 CSPITGSQIFEHKTENEMLKHWRQFVVETDPDVIIGYNTANFDLPYLIDRARALKI---- 418
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
E G N+ E V ES+ + A +G + +++ G
Sbjct: 419 ---------------EEFPYFGRLSNVKQE--VKESVFSSKA-----YGTRTSKNINIDG 456
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++++ ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 457 RLQLDLFQFVQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISS-LQNGDSETRRRLAVYC 515
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +LSRG Q +V S L R + +
Sbjct: 516 LKDAFLPLRLMEKLMALVNYTEMARVTGVPFSYLLSRGQQIKVVSQLFRKCLQID--TVI 573
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P S E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 574 PNMQSQGSDEQYEG-ATVIEPIRGYYDLPIATLDFNSLYPSIMMAHNLCYTTLASK---- 628
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
T+ + D +E +I PNG +V KVR G+LP +L E+++ R K
Sbjct: 629 --TTVETLKLKKD--------EEYIITPNGDYFVTSKVRSGILPEILYELINARKRAKND 678
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K A + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +EK
Sbjct: 679 LK--AEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTSFGRTMIEK 735
Query: 1433 AISFVNENEKWK------AKVIYGDTDRYTV 1457
V E K A V+YGDTD V
Sbjct: 736 TKEAVEEKYSLKNGFKHDAVVVYGDTDSVMV 766
>gi|324120714|dbj|BAJ78748.1| DNA polymerase delta catalytic subunit [Euconocephalus varius]
Length = 1035
Score = 199 bits (507), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 151/514 (29%), Positives = 247/514 (48%), Gaps = 74/514 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D I + + + ++ L C +
Sbjct: 244 FRILSYDIECAGRKGIFPEPNHDPVIQIANMVIQQGQTEPFLRNVFTLDTCAP------I 297
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V SKE + + + + DPDI G++I +L RA HL +
Sbjct: 298 VG---CQVLSFSKEQEMLEKWSEFVREVDPDIFTGYNINNFDFPYLINRAKHLSVRNFTY 354
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R + D +S++ + + + GR ++V GR
Sbjct: 355 LGR------------------VKD--------IQSVIKEQVLQSKQMGRRENKNINVEGR 388
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
++ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R Y +
Sbjct: 389 VIFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHNIITD-LQNGTPQTRRRLAVYCL 447
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--AI 1251
A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR A +NYL A
Sbjct: 448 KDAYLPLRLLDKLMCIINYMEMARVTGVSLASLLTRGQQIKVVSQLLRKARERNYLMPAY 507
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL-GKIL 1310
S G + + A V+EP+ G+Y+DP+ LDF SLYPS+M+A+NLC+ T L G +
Sbjct: 508 SAGVQEDQYEGAT-----VIEPKKGYYSDPIATLDFSSLYPSIMMAHNLCYTTLLQGGV- 561
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
KEN LG++ D+ P +V VRKG+LP +LE +LS R K
Sbjct: 562 --KEN-LGLTP------------DQYTKTPASNFFVKGSVRKGLLPEILENLLSARKKAK 606
Query: 1371 QAIKKLA-PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
+K+ P +Q ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+
Sbjct: 607 ADLKEEKDPFKQ---KVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTM 662
Query: 1430 LEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+E+ V + + A VIYGDTD V
Sbjct: 663 IEQTKQEVEQRYSVANGYQHDASVIYGDTDSVMV 696
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 40/204 (19%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
++Q D+ IF + + IDHY PIPG + G ++ VPV+R++G T G C H
Sbjct: 23 NAQKDALIF--QQIDIDHYSGQPIPG-------MPGSQIGPVPVMRMFGITAEGNSVCCH 73
Query: 63 IHRALPYLYVP---------CADIPVQLRQE--DDGY-----MHAISLALEKALK--VKG 104
+H PY++V CA L DG+ + LA+E K + G
Sbjct: 74 VHGFSPYMFVTAPEGFTDKHCAQFRTALNSAMLADGFVSRDRVQVAVLAVEIVHKQNLFG 133
Query: 105 SAGSKRQHVHECSLVRAKKGGAV---FDK-----SLQPH-----ESHIPFLLQFLVDYNL 151
G + + +L + G+V F+K L PH E++I F ++F+VD +
Sbjct: 134 YRGDQDAPFIKITLAVPRHVGSVRRIFEKGISFAGLPPHTYQFFETNIDFDIRFMVDTGV 193
Query: 152 YGMGHLHLSKLKFRHPVPDAFFPR 175
G + L K+ D F R
Sbjct: 194 VGCSWIELPAGKWSMRAKDRFQSR 217
>gi|402586872|gb|EJW80809.1| hypothetical protein WUBG_08282 [Wuchereria bancrofti]
Length = 522
Score = 199 bits (506), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 139/204 (68%), Gaps = 11/204 (5%)
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI-----LPSKENTL-- 1317
E LPL MEPESGFY DPV+VLDFQSLYPS++IAYN CF TC GK+ + + + +
Sbjct: 5 ETLPLTMEPESGFYRDPVIVLDFQSLYPSIIIAYNYCFTTCFGKVSHIENICTADKIIEF 64
Query: 1318 -GVSSFRP-DLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
G+ P D VL ++L + P G ++ VRKG++P +LEEIL TR+MVK+A K+
Sbjct: 65 GGLEYNCPIDDIVLMFTTNKLHVSPTGAIFCRKDVRKGLMPVMLEEILDTRVMVKKAAKE 124
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
++ L RI ARQ+ALKLIANVTYGY+AA FSGRMPC E+AD+IV GR TLE+A+
Sbjct: 125 CKNDRR-LARILEARQMALKLIANVTYGYSAANFSGRMPCVEVADAIVGKGRETLERAMK 183
Query: 1436 FVNENEKWKAKVIYGDTDR-YTVC 1458
V ++VIYGDTD + VC
Sbjct: 184 LVGNGAYGNSRVIYGDTDSMFVVC 207
>gi|324120728|dbj|BAJ78755.1| DNA polymerase delta catalytic subunit [Blattella nipponica]
Length = 1039
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/509 (29%), Positives = 244/509 (47%), Gaps = 68/509 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHA---VEIYVLLYCKSESHQRSLVG 1015
+LS +++ R + P+P +D + +A DH ++ L C +VG
Sbjct: 249 ILSFDIECAGRKGIFPEPEHDPVIQIANMVVKQGDHEPFLRNVFTLDTCAP------IVG 302
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
C+V ++E L + + DPD++ G++I +L RA HL + + +
Sbjct: 303 ---CQVLSYAREQELLEKWAAFVREVDPDLITGYNINNFDFPYLINRAKHLKVASFSFLG 359
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R +IS V+ E +L + GR ++ GR +
Sbjct: 360 RV----------KDISS-----------VIKEQILQ-----SKQMGRRENKNINCEGRTL 393
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ ++ + KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 394 FDLLLVLVRDYKLRSYTLNAVSYHFLSEQKEDVHHSIITD-LQNGNPQTRRRLAVYCLKD 452
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR A + YL + G
Sbjct: 453 AYLPLRLLDKLMCIINYMEMARVTGVSLSSLLTRGQQIKVVSQLLRKAREKGYLMPAYGG 512
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
Q V+EP+ G+Y+DP+ LDF SLYPS+M+A+NLC+ T L P+ +
Sbjct: 513 ---GVQEEQYEGATVIEPKKGYYSDPIATLDFSSLYPSIMMAHNLCYTTLLN---PASRD 566
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK- 1374
LG++ PD +V P +V VRKG+LP +LE +LS R K +K
Sbjct: 567 NLGLT---PDKYVK---------TPAQNFFVNKSVRKGLLPEILENLLSARKKAKTDLKN 614
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
+ P +Q ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 615 EKDPFRQ---KVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRAMIEQTK 670
Query: 1435 SFVNEN------EKWKAKVIYGDTDRYTV 1457
V ++ + A+VIYGDTD V
Sbjct: 671 QEVEQHYNMANGYQHDAQVIYGDTDSVMV 699
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 38/201 (18%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + +DHY PI G + G + VP++R++G T G C H+H
Sbjct: 27 PAKDALIFQQLDVDHYTGSPIAG-------MPGSQQGSVPIMRMFGVTMEGNSVCCHVHG 79
Query: 66 ALPYLYVP---------CADIPVQL--------RQEDDGYMHAI-SLALEKALKVKGSAG 107
PYL+V C V L R + AI ++ L L + G AG
Sbjct: 80 FSPYLFVSAPSNFTNTDCHPFKVALNKAVLADMRSNKENIREAILAIELVHRLNLLGYAG 139
Query: 108 SKRQHVHECSLVRAKKGGA-------------VFDKSLQPHESHIPFLLQFLVDYNLYGM 154
++ + ++ + A Q ES+I F ++F+VD + G
Sbjct: 140 ENKKGFIKITVALPRLIAACKRLLERETIYPPAGSHQFQAFESNIDFDIRFMVDTEVVGC 199
Query: 155 GHLHLSKLKFRHPVPDAFFPR 175
+ L ++ P AF R
Sbjct: 200 SWVELPAGQWTKRAPSAFISR 220
>gi|324120702|dbj|BAJ78742.1| DNA polymerase delta catalytic subunit [Isonychia japonica]
Length = 1008
Score = 198 bits (504), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 242/506 (47%), Gaps = 69/506 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R + P+P++D + +A N A E ++ K+ I
Sbjct: 213 ILSFDIECAGRKGIFPEPQHDPVIQIANVVINQG--AAEPFI----KNVFTLGECAAIVG 266
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
V E+ L + + DPDI+ G++I L +L RA HLG + + R
Sbjct: 267 THVLSHKTEVSLLEQWANFIREVDPDIITGYNINNFDLFYLLSRAKHLGAKNFDFLGRI- 325
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLHVGGRIVLN 1137
+ I +AKD +++ + GR +++ GR++ +
Sbjct: 326 --------------KNIKS------------IAKDTVLQSKQMGRRENKKINMEGRVIFD 359
Query: 1138 VWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAK 1197
+ ++ + KL YT+ AV+ L + + ++T +G + R R Y V A
Sbjct: 360 LLLVLLRDYKLRSYTLNAVSFHFLGEQKEDVHHSIITD-LQNGDDQTRRRLAVYCVKDAF 418
Query: 1198 LNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL----AISP 1253
L L+++++L I E+ARV G+ +L+RG Q +V S LLR A +Y+ ++
Sbjct: 419 LPLKLLDKLMCIINYMEMARVTGVSLLCLLTRGQQIKVVSQLLRKAKEHDYVIPVYSVRG 478
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
GN + V+EP+ G+Y P+V LDF SLYPS+M+A+NLC+ T L P
Sbjct: 479 GNDEQFEGAT------VIEPKKGYYKQPIVTLDFSSLYPSIMMAHNLCYTTLLQ---PGT 529
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+ LG++S D+ + PN ++ RKG+LP +LE +LS R K+ +
Sbjct: 530 KEKLGLTS------------DQYTVTPNENCFLKASQRKGLLPEILESLLSARKKAKEDL 577
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 578 KK--ETDPLRRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIEQT 634
Query: 1434 ISFVNEN------EKWKAKVIYGDTD 1453
S V + + VIYGDTD
Sbjct: 635 RSEVEQKFCLANGYAHDSTVIYGDTD 660
Score = 41.6 bits (96), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 25 PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
P+PG + G + VPVIR++G T G C H+H PY +V
Sbjct: 4 PLPG-------MPGAQSGAVPVIRMFGVTEQGNSVCCHVHGFAPYFFV 44
>gi|300121429|emb|CBK21809.2| unnamed protein product [Blastocystis hominis]
Length = 626
Score = 197 bits (502), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/265 (40%), Positives = 159/265 (60%), Gaps = 14/265 (5%)
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
++ I+ ++NR E + GID L+RGSQY++E++LLR+ +++++ +I Q+
Sbjct: 8 SIHILYHTHILNRLIESCTIQGIDLTDELTRGSQYKIENILLRINNSKDFSSIFVSKLQL 67
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK----- 1313
A QP+ +PLVMEP S Y DP+VV+DFQSLYPS+MIAYN+CF TCLG +
Sbjct: 68 AHQPSAASIPLVMEPYSNLYNDPLVVMDFQSLYPSVMIAYNICFSTCLGNLNKKTGVWIE 127
Query: 1314 ---ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
+LG + R + K + P G ++V VR+G++ +++ EIL RI++K
Sbjct: 128 RVLNGSLGCTKER---EIEAAYKGGFHVSPTGTVFVNKNVREGIIVKMVSEILRIRILIK 184
Query: 1371 QAIK--KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
+K + P I + QLALK I N TYGY AGFSGRMP A++ DSIV+ GR
Sbjct: 185 NVLKNNRNHPLYDHYKSILDFNQLALKGIVNTTYGYINAGFSGRMPNAQIGDSIVEYGRV 244
Query: 1429 TLEKAISFVNENEKWKAKVIYGDTD 1453
L K+I++V N +V+Y DTD
Sbjct: 245 ILTKSINYV-LNHFNDVEVVYADTD 268
>gi|426198033|gb|EKV47959.1| hypothetical protein AGABI2DRAFT_116764 [Agaricus bisporus var.
bisporus H97]
Length = 675
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 144/221 (65%), Gaps = 3/221 (1%)
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
D W S + V GR VLNVWR+MR E+ L YT+ VA V+R+++P F L++W+
Sbjct: 422 DRWDGQTTSNIKVAGRHVLNVWRIMRSELALTSYTLSNVAFHVMRQRVPFYSFATLSRWY 481
Query: 1178 -ASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVE 1236
++GP + Y++ R L+I+ + +++ +T+E AR+FG++F SV+S GSQ++VE
Sbjct: 482 DSTGPSHV-VALMRYLIQRNCATLQILEETELVTKTAEFARIFGVNFHSVISCGSQFKVE 540
Query: 1237 SMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMI 1296
S + R+A ++N++ +SP V Q A EC+PL+MEP S FY P+V+LDFQS YPS+MI
Sbjct: 541 SFMFRIAKSENFVLLSPSKSDVGLQNAAECMPLIMEPMSAFYTSPLVILDFQSPYPSVMI 600
Query: 1297 AYNLCFCTCLGKILPSKEN-TLGVSSFRPDLHVLRDLKDEL 1336
AYN C+ +CLG+I P + N GV++ +L L++ +
Sbjct: 601 AYNYCYSSCLGRIKPFQGNYKFGVTNLDLGPGILDALQEHI 641
>gi|324120740|dbj|BAJ78761.1| DNA polymerase delta catalytic subunit [Bemisia tabaci]
Length = 1094
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 240/507 (47%), Gaps = 60/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+P +D + +A + + I + K + +VG
Sbjct: 300 FRILSFDIECAGRKGIFPEPNHDPVIQIANMVVQQGEPEIFIRNVFTLKECA---PIVG- 355
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
C+V C E+ L + + DPD+ G++I +L RA HL + + + R
Sbjct: 356 --CQVISCDTEMELLQRWSDFVRESDPDVFTGYNINNFDFPYLINRAKHLNVHNFSFLGR 413
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
I D S++ I + GR ++ GR+
Sbjct: 414 ------------------IKD--------TRSVIKDQIIQSKQMGRRENKNINFEGRVPF 447
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++ + KL YT+ AV+ L+ + + ++T+ G + R R Y + A
Sbjct: 448 DLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHNMITE-LQEGTAQTRRRLAVYCLKDA 506
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L + ++ +L E+ARV G+ S+L+RG Q +V S LLR A + +L + H
Sbjct: 507 YLPIRLLEKLMCFINYMEMARVTGVPLASLLTRGQQIKVVSQLLRKAREKGFLMPT---H 563
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
Q V+EP+ G+Y +P+ LDF SLYPS+M+A+NLC+ T L P+ ++
Sbjct: 564 TGGQQDDQFEGATVIEPKKGYYNEPIATLDFSSLYPSIMMAHNLCYTTLLQ---PNMKDK 620
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
L +S PD++V P +V VRKG+LP +L+++L+ R K +KK
Sbjct: 621 LNLS---PDMYVK---------TPAQNFFVKSSVRKGLLPEILDDLLTARKKAKADLKK- 667
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 668 -ETDPFKQKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIEQTKQE 725
Query: 1437 VNENE------KWKAKVIYGDTDRYTV 1457
V ++ K+ A+VIYGDTD V
Sbjct: 726 VEQHYCIANGFKYDAEVIYGDTDSVMV 752
Score = 49.3 bits (116), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 38/190 (20%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
D P+ + + +S+D Y P+ G + G ++ VP+ R++G T G C H
Sbjct: 75 DLDPEKDGIVFQQISLDSYTGEPVKG-------MPGSQLGPVPIFRIFGITMEGNSVCAH 127
Query: 63 IHRALPYLYV------------PCAD-----IPVQLRQEDDGYMHAISLA-LEKALKVKG 104
+H PY +V P D I +R G A+ + + + + G
Sbjct: 128 VHGFSPYFFVTAPAGFNESHCRPFKDALNRTILNDMRGNKSGIQEAVLMVEIVRKQTMFG 187
Query: 105 SAGSKRQHVHECSLV---------RAKKGGAVF----DKSLQPHESHIPFLLQFLVDYNL 151
G + + + ++ R + AVF + + + ES+I F ++F+VD N+
Sbjct: 188 YWGDEVKDFLKITVALPRLIAAGKRLLEKEAVFPSFPNHAYKAFESNIDFDIRFMVDKNI 247
Query: 152 YGMGHLHLSK 161
G + L K
Sbjct: 248 VGCSWVELGK 257
>gi|324120732|dbj|BAJ78757.1| DNA polymerase delta catalytic subunit [Thrips palmi]
Length = 1091
Score = 196 bits (499), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 144/510 (28%), Positives = 237/510 (46%), Gaps = 66/510 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D + +A + + DS+ + ++ L C +
Sbjct: 297 FRILSFDIECAGRKGIFPEPTHDPVIQIANMVIRQGDSEPFIRNVFTLNTCAP------I 350
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V C KE + + + DPDI G++I +L RA HL +
Sbjct: 351 VG---CQVISCDKETEMLEKWADFVREVDPDIFTGYNITNFDFPYLINRAKHLTVKNFTY 407
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R + D +S++ + + + GR ++ GR
Sbjct: 408 LGR------------------VKD--------IQSVIKESQLFSKQMGRRENKNVNFEGR 441
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ + KL YT+ AV+ L+ + + V+T +G + R R Y +
Sbjct: 442 VPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSVITD-LQNGTSQTRRRLAVYCL 500
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++ +L I E+ARV G+ S+L+RG Q +V S LLR A +Y I P
Sbjct: 501 KDAYLPLRLLEKLMCIINYMEMARVTGVTLGSLLTRGQQIKVVSQLLRKAKEHDY--IMP 558
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
E V+EP+ G+Y DP+ LDF SLYPS+M+A+NLC+ T L +
Sbjct: 559 TYQSTGGDDQYEG-ATVIEPKRGYYGDPISTLDFSSLYPSIMMAHNLCYTTLLQA---NN 614
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
LG++ D+ P +V VRKG+LP +LE +L+ R K +
Sbjct: 615 REKLGLTP------------DQYSHTPANNYFVKASVRKGLLPEILESLLNARKKAKADL 662
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 663 KK--ETDPFKQKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIEQT 719
Query: 1434 ISFVNENEKWK------AKVIYGDTDRYTV 1457
+ V + + A VIYGDTD V
Sbjct: 720 KTEVETKYRIENGYEHDAVVIYGDTDSVMV 749
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 42/187 (22%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
PD + + +DHY P+PG + G ++ VPV+R+YG T G C H+H
Sbjct: 73 PDQQNLEFQQIDVDHYTGTPMPG-------MPGSQIGPVPVMRLYGVTMEGNSVCCHVHG 125
Query: 66 ALPYLYV------------PCAD-----IPVQLRQEDDGYMHAISLALE--KALKVKGSA 106
PY +V P D + ++ D A+ LA+E K + G
Sbjct: 126 FSPYFFVSAPKGFNNSHCKPFKDSLNKAVLADMKGNRDNVQEAV-LAVEIVKKQSLYGYR 184
Query: 107 GSKRQHVHECSLV---------RAKKGGAVFDKSLQPH-----ESHIPFLLQFLVDYNLY 152
G Q+ ++ R + G +F +L PH ES+I F ++F+VD N+
Sbjct: 185 GDDMQNFLRVTVALPRLIAASKRLLEKGDIF-TALGPHAFTSYESNIDFDIRFMVDANMV 243
Query: 153 GMGHLHL 159
G + L
Sbjct: 244 GCNWIEL 250
>gi|89886293|ref|NP_001034899.1| DNA polymerase delta catalytic subunit [Danio rerio]
gi|58615463|gb|AAW80296.1| DNA polymerase delta1 catalytic subunit [Danio rerio]
Length = 1105
Score = 196 bits (498), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 241/510 (47%), Gaps = 67/510 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A + + I + +S + S+VG
Sbjct: 314 LRVLSFDIECAGRKGVFPEPEVDPVIQIASMVQRQGEKEPFIRTVFTLQSCA---SIVG- 369
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ ++E + + + + + DPDI+ G++IQ L +L RAA L + + + R
Sbjct: 370 --SQILCFTQEKLMLQSWAEFMRTVDPDIITGYNIQNFDLPYLLNRAATLKVNMFPYLGR 427
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+S+L + + GR +++ GR+
Sbjct: 428 V--------------------------WGCKSVLKDSSFQSKQMGRRENKTINMEGRVQF 461
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y + A
Sbjct: 462 DLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLKDA 520
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AISP 1253
L L ++ +L + E+ARV G+ +LSRG Q +V S LLR A Q+ + +
Sbjct: 521 YLPLRLLQKLMCVINYMEMARVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTE 580
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
G V+EPE G+Y+ P+ LDF SLYPS+M+A+NLC+ T L K S+
Sbjct: 581 GGEDYTG-------ATVIEPEKGYYSVPIATLDFSSLYPSIMMAHNLCYTTLLQK---SQ 630
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
LG+ D+ + P G ++V VRKG+LP +LE +LS R K +
Sbjct: 631 IEKLGLGP------------DDFIKTPTGDLFVKSSVRKGLLPEILENLLSARKRAKAEL 678
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E+
Sbjct: 679 KK--ETDPFKKQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIEQT 735
Query: 1434 ISFV------NENEKWKAKVIYGDTDRYTV 1457
V + + AKVIYGDTD V
Sbjct: 736 KQLVESRYTLDNGYQADAKVIYGDTDSVMV 765
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 38/191 (19%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P S+ + + +D+Y+ + G + G +VP++R++G T G C HIH
Sbjct: 84 PKSDTLIFQQIDLDYYLGAAVAG-------MPGQVQGKVPIVRMFGVTDNGNSVCCHIHG 136
Query: 66 ALPYLYVPCAD-----------------IPVQLRQEDDGY-MHAISLALEKALKVKGSAG 107
PY YVP + + +R D + +++ + K + G
Sbjct: 137 FAPYFYVPAPNGFTNAHLAGFQRELNSVVLKDMRSNKDNIAVTVLAVDITKKESMYNYHG 196
Query: 108 SKRQHVHECSLV---------RAKKGGAVF----DKSLQPHESHIPFLLQFLVDYNLYGM 154
+K ++ R + G F +S Q E++I F ++F+VD N+ G
Sbjct: 197 NKPHDFLRITMAMPRLVAPAKRLLEQGFKFANFATQSYQAFEANIDFEIRFMVDSNVVGC 256
Query: 155 GHLHLSKLKFR 165
+ L K K++
Sbjct: 257 CWIELPKGKYQ 267
>gi|190340064|gb|AAI63875.1| Polymerase (DNA directed), delta 1, catalytic subunit [Danio rerio]
Length = 1105
Score = 196 bits (497), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 241/510 (47%), Gaps = 67/510 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A + + I + +S + S+VG
Sbjct: 314 LRVLSFDIECAGRKGVFPEPEVDPVIQIASMVQRQGEKEPFIRTVFTLQSCA---SIVG- 369
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ ++E + + + + + DPDI+ G++IQ L +L RAA L + + + R
Sbjct: 370 --SQILCFTQEKLMLQSWAEFMRTVDPDIITGYNIQNFDLPYLLNRAATLKVNMFPYLGR 427
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+S+L + + GR +++ GR+
Sbjct: 428 V--------------------------WGCKSVLKDSSFQSKQMGRRENKTINMEGRVQF 461
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y + A
Sbjct: 462 DLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLKDA 520
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AISP 1253
L L ++ +L + E+ARV G+ +LSRG Q +V S LLR A Q+ + +
Sbjct: 521 YLPLRLLQKLMCVINYMEMARVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTE 580
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
G V+EPE G+Y+ P+ LDF SLYPS+M+A+NLC+ T L K S+
Sbjct: 581 GGEDYTG-------ATVIEPEKGYYSVPIATLDFSSLYPSIMMAHNLCYTTLLQK---SQ 630
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
LG+ D+ + P G ++V VRKG+LP +LE +LS R K +
Sbjct: 631 IEKLGLGP------------DDFIKTPTGDLFVKSSVRKGLLPEILENLLSARKRAKAEL 678
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E+
Sbjct: 679 KK--ETDPFKKQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIEQT 735
Query: 1434 ISFV------NENEKWKAKVIYGDTDRYTV 1457
V + + AKVIYGDTD V
Sbjct: 736 KQLVESRYTLDNGYQADAKVIYGDTDSVMV 765
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 38/191 (19%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P S+ + + +D+Y+ + G + G +VP++R++G T G C HIH
Sbjct: 84 PKSDTLIFQQIDLDYYLGAAVAG-------MPGQVQGKVPIVRMFGVTDNGNSVCCHIHG 136
Query: 66 ALPYLYVPC---------ADIPVQLR---------QEDDGYMHAISLALEKALKVKGSAG 107
PY YVP AD +L +D+ + +++ + K + G
Sbjct: 137 FAPYFYVPAPNGFTNAHLADFQRELNSVVLKDMRSNKDNIAVTVLAVDITKKESMYNYHG 196
Query: 108 SKRQHVHECSLV---------RAKKGGAVF----DKSLQPHESHIPFLLQFLVDYNLYGM 154
+K ++ R + G F +S Q E++I F ++F+VD N+ G
Sbjct: 197 NKPHDFLRITMAMPRLVAPAKRLLEQGFKFANFATQSYQAFEANIDFEIRFMVDSNVVGC 256
Query: 155 GHLHLSKLKFR 165
+ L K K++
Sbjct: 257 CWIELPKGKYQ 267
>gi|384484631|gb|EIE76811.1| hypothetical protein RO3G_01515 [Rhizopus delemar RA 99-880]
Length = 539
Score = 196 bits (497), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 130/174 (74%), Gaps = 3/174 (1%)
Query: 1282 VVVLDFQSLYPSMMIAYNLCFCTCLGKIL-PSKENTLGV-SSFRPDLHVLRDLKDELLIP 1339
+ VLDFQSLYPS+MIAYN C+ TCLG++ P + + GV SF +L LKD + I
Sbjct: 1 MAVLDFQSLYPSIMIAYNYCYSTCLGRVKKPEESSRFGVLESFDLPDGLLESLKDYINIS 60
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIAN 1399
PNGVM+V ++RKG+L ++L+E+L+TR+MVK+++K +L R+ +A+QL LK I+N
Sbjct: 61 PNGVMFVKHEIRKGLLGKMLQELLNTRVMVKKSMKDYKDDPGLL-RMLDAKQLTLKFISN 119
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
VTYGYT+A FSGRMP E+ADSIVQ GR TLE+ I+ +NE EKW A+V+YGDTD
Sbjct: 120 VTYGYTSASFSGRMPSVEIADSIVQTGRETLERTINLINETEKWGARVVYGDTD 173
>gi|156552223|ref|XP_001606357.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Nasonia
vitripennis]
Length = 1086
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/511 (28%), Positives = 240/511 (46%), Gaps = 68/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+LS +++ R + P+P +D + N+V L E++ I+ L C
Sbjct: 292 FRILSFDIECAGRKGIFPEPEHDPVIQIANMVILQGESEP-FLRNIFTLDTCAP------ 344
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG C+V KE + + + DPDI G++I +L RA HL + N
Sbjct: 345 IVG---CQVLSFEKESSMLEKWADFIRQLDPDIFTGYNINNFDFPYLINRAQHLHVRDFN 401
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ R N+ S++ + + GR ++ G
Sbjct: 402 YLGRI-------------------KNI-------RSVIKNQVLQSKQMGRRENKFVNFEG 435
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ ++ + KL YT+ AV+ L+ + + +++ +G + R R Y
Sbjct: 436 RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIISD-LQNGNAQTRRRLAVYC 494
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR + YL
Sbjct: 495 LKDAYLPLRLLDKLMCIIIYMEMARVTGVSLSSLLTRGQQIKVVSQLLRKTIERGYLI-- 552
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P +H S E V+EP G+Y DP+ LDF SLYPS+++A+N+C+ T L PS
Sbjct: 553 PVHHGQGSDEQYEG-ATVIEPLRGYYNDPIATLDFSSLYPSIIMAHNICYTTLLS---PS 608
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+N +S+ D++ P +V VRKG+LP +LE++LS R K
Sbjct: 609 AQNHYNLSN------------DDITRTPANSNFVKGSVRKGILPEILEQLLSARKAAKAD 656
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+KK + + ++ + RQ ALK+ AN YG+T A G++PC E++ S+ GR+ +EK
Sbjct: 657 LKK--ETDPLKQKVLDGRQYALKVSANSVYGFTGAQ-QGKLPCLEISGSVTAYGRTMIEK 713
Query: 1433 AISFVNENEKWK------AKVIYGDTDRYTV 1457
V + + + A VIYGDTD V
Sbjct: 714 TKQEVETHYRKENGYDHDAVVIYGDTDSVMV 744
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + +DHY P+PG + G ++ VPV+R+YG T G C H+H
Sbjct: 69 PSKDTLCFQQIDVDHYTDKPMPG-------MPGSRIGPVPVMRMYGVTEQGNSVCCHVHG 121
Query: 66 ALPYLYV 72
PY +V
Sbjct: 122 FSPYFFV 128
>gi|241957481|ref|XP_002421460.1| DNA polymerase III, putative; DNA polymerase delta catalytic subunit,
putative [Candida dubliniensis CD36]
gi|223644804|emb|CAX40796.1| DNA polymerase III, putative [Candida dubliniensis CD36]
Length = 1040
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 241/508 (47%), Gaps = 62/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A + + + + + S S++G
Sbjct: 246 LRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKPFVRNVFTVNTCS---SIIG- 301
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++F +E + H+ + + DPD+++G++ + ++ RA LG LND
Sbjct: 302 --SQIFEHKREEDMLMHWKEFIIKVDPDVIIGYNTANFDIPYVLNRAKALG---LNDF-- 354
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVGGRIV 1135
P ++ EI KDA+ +G +++ GR+
Sbjct: 355 -PFFGRLKRVKQEI---------------------KDAVFSSRAYGTRENKVVNIDGRMQ 392
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ + ++ E KL YT+ +V+ L + + ++T +G R R Y +
Sbjct: 393 LDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGTKETRRRLAVYCLKD 451
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L ++++L + +E+ARV G+ F +LSRG Q +V S L R +N + P
Sbjct: 452 AFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVISQLFRKCLQEN--IVIPNL 509
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ E V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 510 KSEGTNEEYEG-ATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNK---NSIK 565
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
G++ +D+ PNG +V K+RKG+LP +L+E+L+ R K +KK
Sbjct: 566 AFGLT------------EDDYTKTPNGDYFVNSKLRKGILPTILDELLTARKKAKADLKK 613
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + N RQLALK+ AN YG+T A G++PC ++ S+ GR +EK +
Sbjct: 614 --ETDPFKKDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGREMIEKTKN 670
Query: 1436 FVNE------NEKWKAKVIYGDTDRYTV 1457
V E + AKVIYGDTD V
Sbjct: 671 EVQEYYSRKNGHPYDAKVIYGDTDSVMV 698
>gi|324120760|dbj|BAJ78771.1| DNA polymerase delta catalytic subunit [Lucidina biplagiata]
Length = 1045
Score = 194 bits (492), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 244/511 (47%), Gaps = 73/511 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
L S +++ R + P+ D + NV L + +D ++ L C + +
Sbjct: 251 LHSFDIECAGRKGIFPEANVDPVIQIANVXKL-YGSDDVLTRNVFTLNTCAA-------I 302
Query: 1015 GIPDCKVFVCSKE-IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
G + + F ++ + ++ F++ L DPD+ G++I + +L +RA HL + +
Sbjct: 303 GHAEVRCFETEQQMLEAWADFVRDL---DPDVFTGYNINNFDIPYLLDRAKHLKLKNFDF 359
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R ++ K+ + + ++G+ ++ GR
Sbjct: 360 LGR---------------------------ILGIKSAVKETVNQTKFGKRTFKTVNFEGR 392
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ +++ +M+ + KL YT+ V+ +L + + + ++T +G + R R Y +
Sbjct: 393 VTYDMFVVMKRDFKLRSYTLNNVSNEILGEQKEDVHYSIITD-LQNGDEQTRRRLAVYCI 451
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L +++ + E+ARV G+ S+L++G Q +V + LLR H+Q P
Sbjct: 452 KDADLPLRLLDHVKSFANDIEMARVTGVSITSLLTKGEQIKVVAQLLR--HSQQSGYFMP 509
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
+ S E V+EP G+Y DP+ LDF SLYPS+MIA+NLC+ T L + K
Sbjct: 510 THRYAPSSEQYEG-ATVIEPIRGYYTDPIATLDFSSLYPSIMIAHNLCYTTLLHSGMKDK 568
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
LG++S DE+ + P+ M+V VR G+LP +L+++L+ R K A+
Sbjct: 569 ---LGLTS------------DEITVTPSQNMFVKSSVRPGLLPEILQQLLAARKRAKDAL 613
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
K ++ + N RQLALK+ AN YG+T A G++PC E++ S+ GRS +E+
Sbjct: 614 KD--EQDPVMRAVLNGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRSMIEQT 670
Query: 1434 -------ISFVNENEKWKAKVIYGDTDRYTV 1457
S N E AKVIYGDTD V
Sbjct: 671 RLEVERHYSVANGFEN-DAKVIYGDTDSVMV 700
Score = 49.3 bits (116), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 35/171 (20%)
Query: 16 VSIDHYM--APPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV- 72
+ +DHY+ AP YS++ G + VPV+R++G T G C H+H PY YV
Sbjct: 41 LELDHYISKAP--------YSNMPGAQTGSVPVMRMFGVTAEGHSVCCHVHGFHPYFYVL 92
Query: 73 ------PCADIPVQLRQ----EDDGYMHAISLAL--------EKALKVKGSAGSKRQHV- 113
D +L + + + +S A+ + L+ G SK +
Sbjct: 93 LPSDFTDTHDFKNKLNRAVLSDVKSFADKVSEAVLMVEIKEGKSLLEFTGHENSKFAKIT 152
Query: 114 -----HECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHL 159
+ R + G ++S ES++ L+F++D ++ G +HL
Sbjct: 153 VALPRFVAAAKRILENGVYENRSFSSFESNVDIDLRFMIDTHILGCSWIHL 203
>gi|348533053|ref|XP_003454020.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oreochromis
niloticus]
Length = 1105
Score = 194 bits (492), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 144/510 (28%), Positives = 241/510 (47%), Gaps = 67/510 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A + + I + +S + S+VG
Sbjct: 314 LRVLSFDIECAGRKGIFPEPDKDPVIQIASMVQRQGETEPFIRTVFTLQSCA---SIVG- 369
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ ++E L + + L + DPDI+ G++IQ +L RAA L + + R
Sbjct: 370 --SQILCFTQETKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVNYFPYLGR 427
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
RGI +S+L + GR +++ GR+
Sbjct: 428 V---------------RGI-----------KSVLKDLNFQSKQMGRRENKTINMEGRVQF 461
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y + A
Sbjct: 462 DLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLKDA 520
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AISP 1253
L L ++ +L + E+ARV G+ +LSRG Q +V S LLR A Q+ + +
Sbjct: 521 YLPLRLLQKLMCVINYMEMARVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTE 580
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
G V+EPE G+Y+ P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 581 GGEDYTG-------ATVIEPEKGYYSLPIATLDFSSLYPSIMMAHNLCYTTLLQK---GS 630
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+ LG++ ++ + P G ++V +RKG+LP +LE +LS R K +
Sbjct: 631 VDKLGLAP------------EDFIKTPTGDLFVKSSLRKGLLPEILENLLSARKRAKAEL 678
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E+
Sbjct: 679 KK--ETDPFKKQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIEQT 735
Query: 1434 ISFV------NENEKWKAKVIYGDTDRYTV 1457
V + + AKVIYGDTD V
Sbjct: 736 KQLVESKYTLSNGYQADAKVIYGDTDSVMV 765
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 38/191 (19%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P S+I + + +D+Y+ + G + G +VP+IR++G T G C H+H
Sbjct: 84 PSSDILVFQQIDLDYYLGETVAG-------MPGQSQGKVPIIRMFGVTDNGNSVCCHVHG 136
Query: 66 ALPYLYVPCAD-----IPVQLRQE-------------DDGYMHAISLALEKALKVKGSAG 107
PY YVP + V+ ++E D+ + +++ + + + G G
Sbjct: 137 FAPYFYVPAPNGFTSAHLVEFQKELNSAVLKDMRSNKDNISVTVLAVDITRKESMYGYHG 196
Query: 108 SKRQHVHECSLV---------RAKKGGAVFD----KSLQPHESHIPFLLQFLVDYNLYGM 154
+ ++ R + G F + Q +E++I F ++F+VD ++ G
Sbjct: 197 KRIIDFLRITMAMPRLIAPAKRLLEQGFKFSHFPTSNYQSYEANIDFEIRFMVDSDVVGC 256
Query: 155 GHLHLSKLKFR 165
+ L K K+R
Sbjct: 257 CWIELPKGKYR 267
>gi|380019903|ref|XP_003693840.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Apis florea]
Length = 1105
Score = 194 bits (492), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 237/506 (46%), Gaps = 66/506 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D + +A + + +S+ + I+ L C +
Sbjct: 311 FRILSFDIECAGRKGIFPEPNHDPVIQIANMVIKQGESEPFLRNIFTLDTCAP------I 364
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V E + + + DPDI G++I +L RA+HL +
Sbjct: 365 VG---CQVLSFETEHKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRASHLNV----- 416
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ G N+ +S++ + + GR ++ GR
Sbjct: 417 --------------RDFYFLGRIKNI-------KSVIKTQVLQSKQMGRRENKSINFEGR 455
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R Y +
Sbjct: 456 VPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGNAQTRRRLAVYCL 514
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR ++YL P
Sbjct: 515 KDAYLPLRLLDKLMCIFIYMEMARVTGVSISSLLTRGQQIKVVSQLLRKTREKDYLM--P 572
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
+ AS E V+EP+ G+Y DP+ LDF SLYPS+++A+NLC+ T L +K
Sbjct: 573 VHRGQASDEQFEG-ATVIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLLKYDKQTK 631
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
N D + I PN ++ +RKG+LP +LE +LS R K +
Sbjct: 632 NNIQS---------------DNITITPNDSKFIKANIRKGILPEILENLLSARKAAKAEL 676
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + + ++ + RQ ALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 677 KK--ETDPLKQKVLDGRQYALKVSANSVYGFTGAQM-GKLPCLEISASVTAYGRTMIERT 733
Query: 1434 ISFVNEN------EKWKAKVIYGDTD 1453
V E K A V+YGDTD
Sbjct: 734 KQEVEEQYCISKGYKNNAVVVYGDTD 759
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 41/188 (21%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
+ Q D+ IF + + IDHY P+PG + G + VP++R++G T G C H
Sbjct: 87 NPQKDALIF--QQIEIDHYSGIPLPG-------MPGSNIPPVPIMRMFGVTELGNSVCCH 137
Query: 63 IHRALPYLYVPCAD-----------------IPVQLRQEDDGYMHAISLALEKALK--VK 103
+H PYLYV I +R + A+ LA+E+ K +
Sbjct: 138 VHGFSPYLYVIAPTNFNDHHCRLFKEALDKAILKDMRSNPENIQVAV-LAVERVFKQNMY 196
Query: 104 GSAGSKRQHVHECSLV------RAKKGG------AVFDKSLQPHESHIPFLLQFLVDYNL 151
G G ++ + +L R KK + F ES+I F ++F+VD ++
Sbjct: 197 GYTGDEKSLFLKITLALPRLISRCKKIVEEESILSEFRHQYTAFESNIDFDIRFMVDTSV 256
Query: 152 YGMGHLHL 159
G + L
Sbjct: 257 VGCSWIEL 264
>gi|324120688|dbj|BAJ78735.1| DNA polymerase delta catalytic subunit [Petrobiellus takunagae]
Length = 1005
Score = 194 bits (492), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 156/509 (30%), Positives = 245/509 (48%), Gaps = 68/509 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R + P+P +D + N+V E D ++ L C +V
Sbjct: 215 ILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEQDP-FIRNVFTLGTCAP------IV 267
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G C+V ++E L + + DPDI+ G++I +L RA HLG+ +
Sbjct: 268 G---CEVLSFAREAELLKRWADFVREADPDIVTGYNINNFDFPYLLNRAQHLGVKDFPFL 324
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R I D VV E++L + GR ++ GR+
Sbjct: 325 GR------------------IKD---IRTVVKETVLQSKQL-----GRRENKFINTEGRV 358
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+ ++ ++ E KL YT+ AV+ L+ + + +++ +G + R R Y +
Sbjct: 359 LFDLLLVLVREYKLRSYTLNAVSFHFLQEQKEDVQHSIISD-LQNGNSQTRRRLAVYCLK 417
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
+ L L ++++L I E+ARV G+ S+L+RG Q +V S LLR A +++ + P
Sbjct: 418 DSYLPLRLLDKLMCIINYMEMARVTGVSLPSLLTRGQQIKVVSQLLRKAREKDF--VIPT 475
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
S E V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 476 YQGTGSDEQYEG-ATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLQ---PGWV 531
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
N LG++ PDL+V P G M+V VRKG+LP +LE +L+ R K+ +K
Sbjct: 532 NKLGLT---PDLYVE---------TPAGSMFVKSTVRKGLLPEILESLLAARKKAKEDLK 579
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
K + + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 580 K--ETDPLRCKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAFGRQMIEFTK 636
Query: 1435 -----SFVNEN-EKWKAKVIYGDTDRYTV 1457
F EN AKVIYGDTD V
Sbjct: 637 QQVENKFCVENGYSHNAKVIYGDTDSVMV 665
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 19 DHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
DHY+ P+PG + G + VPV+R+YG T G C H+H PY YV
Sbjct: 1 DHYIGRPLPG-------MPGAQTGPVPVMRMYGVTAEGNSVCCHVHGFSPYFYV 47
>gi|336472726|gb|EGO60886.1| hypothetical protein NEUTE1DRAFT_120002 [Neurospora tetrasperma FGSC
2508]
gi|350294031|gb|EGZ75116.1| DNA polymerase delta catalytic subunit [Neurospora tetrasperma FGSC
2509]
Length = 1104
Score = 193 bits (491), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 240/509 (47%), Gaps = 64/509 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P++DS+ +A + + + + S I
Sbjct: 306 LRILSFDIECAGRKGIFPEPQHDSVIQIANIVTKYGEKKPFVRNVFCLDTTS------PI 359
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ +E + + L DPDI++G++I +L +RA HL + + SR
Sbjct: 360 VATQILSFDREEDMLREWRNFLEQVDPDIIIGYNIANFDFPYLLDRAKHLKVKDFDFWSR 419
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
T + S A ++ S + + G ++ GR+ L
Sbjct: 420 TRVRS--VAKETNFSSK-------------------------QMGNRDTKATNINGRLQL 452
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y + A
Sbjct: 453 DMLQLVQRDYQLRSYTLNSVCSHFLGEQKEDVHHSMITELFEGTP-ESRRRLALYCLKDA 511
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q + P
Sbjct: 512 YLPQRLMDKLSCLENYTEMARVTGVPFNFLLARGQQVKFLSQLFRKALEQKL--VIPNLR 569
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+S+ E V+EP G+Y P+ LDF SLYPS+M A+NLC+ T + K
Sbjct: 570 PESSEEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLIKK-------- 620
Query: 1317 LGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
D+ KDE ++ PNG M+V K RKG+L ++LEE+LS R KQA ++
Sbjct: 621 -------RDIERWDLKKDEDYIVTPNGDMFVTTKQRKGLLAQILEELLSAR---KQAKRE 670
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + + N RQLALK+ AN YG T A +G++PC E+A S+ GR +E+
Sbjct: 671 LAVEKDPFKKAVLNGRQLALKVSANSVYGLTGAT-NGKLPCLEIASSVTSFGRQMIERTK 729
Query: 1435 SFVNEN------EKWKAKVIYGDTDRYTV 1457
V E A+VIYGDTD V
Sbjct: 730 KEVEERYTIANGYSHDAQVIYGDTDSVMV 758
>gi|427792855|gb|JAA61879.1| Putative dna polymerase type-b family, partial [Rhipicephalus
pulchellus]
Length = 1003
Score = 193 bits (490), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 151/508 (29%), Positives = 239/508 (47%), Gaps = 73/508 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P DS+ N+V E D ++ L C S
Sbjct: 211 LRILSFDIECAGRKGIFPEPEKDSVIQIANMVMRQGEKDP-FIRNVFTLNTCTS------ 263
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I C+V E L + L DPDI+ G++IQ +L RA L + L
Sbjct: 264 ---IAGCEVLCFQFERELLKRWSDFLREVDPDIITGYNIQNFDFPYLMNRAKTLQVDLF- 319
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLHVG 1131
P +I + L KDAI++ + GR + +
Sbjct: 320 -----PFLGRIRNCKT---------------------LLKDAIMQSKQMGRRENKVVTME 353
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ ++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y
Sbjct: 354 GRVQFDLLQVLLRDYKLRSYTLNAVSYHFLQEQKEDVQHSIITD-LQNGTDQTRRRLAVY 412
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L L ++++L + E+ARV G+ +LSRG Q +V S LLR A Q+ +
Sbjct: 413 CLKDAMLPLRLLDKLMSVINYMEMARVTGVPMTYLLSRGQQIKVVSQLLRKAAEQDL--V 470
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P H A + V+EP GFY+ P+ LDF SLYPS+M+A+NLC+ T +L
Sbjct: 471 MPVVHSEAGEDFEGAT--VIEPVKGFYSVPIATLDFSSLYPSIMMAHNLCYTT----VLD 524
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+++ L +P D+ + P+G +V VRKG+LP +LE++LS R K
Sbjct: 525 NRQREL----LKP---------DQFIRTPSGDHFVKASVRKGLLPEILEDLLSARKRAKT 571
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K + ++ + RQLALK+ AN YG+T A G++PC ++ S+ GR+ +E
Sbjct: 572 DLKN--ETDPFRKKVLDGRQLALKISANSVYGFTGAQV-GKLPCLAISKSVTAFGRTMIE 628
Query: 1432 KAISFVN------ENEKWKAKVIYGDTD 1453
K V + AKVIYGDTD
Sbjct: 629 KTKQEVEARYTRANGYEHDAKVIYGDTD 656
Score = 47.4 bits (111), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Query: 18 IDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADI 77
+DHY+ P+PG + G +P++R++G T G H+H LPY YV +
Sbjct: 2 LDHYLGEPLPG-------MPGMSRGPIPIVRMFGVTDDGHSVLCHVHGFLPYFYV---EA 51
Query: 78 PVQLRQE 84
P R+E
Sbjct: 52 PPNFRKE 58
>gi|432868483|ref|XP_004071560.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oryzias
latipes]
Length = 1107
Score = 193 bits (490), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 239/510 (46%), Gaps = 67/510 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A + + I + +S + S+VG
Sbjct: 316 LRVLSFDIECAGRKGIFPEPDKDPVIQIASMVQRQGETEPFIRTVFTLQSCT---SIVG- 371
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ ++E L + + L + DPDI+ G++IQ +L RAA L + + R
Sbjct: 372 --SQILCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLINRAAALKVTYFPYLGR 429
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
NM +S+L + + GR +++ GR+
Sbjct: 430 V-------------------RNM-------KSVLKESNFQSKQMGRRENKTINMEGRVQF 463
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +++ + KL YT+ AV+ L+ + + +++ +G + R R Y + A
Sbjct: 464 DLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIISD-LQNGNEQTRRRLAVYCLKDA 522
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AISP 1253
L L ++ +L + E+ARV G+ +LSRG Q +V S LLR A QN + +
Sbjct: 523 YLPLRLLQKLMCVINYMEMARVTGVPLSYLLSRGQQIKVVSQLLRQAMKQNLVMPVVKTE 582
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
G V+EPE G+Y+ P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 583 GGEDYTG-------ATVIEPEKGYYSVPITTLDFSSLYPSIMMAHNLCYTTLLQK---GS 632
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
L +SS ++ + P G +V VRKG+LP +LE +LS R K +
Sbjct: 633 VERLQLSS------------EDFIKTPTGDQFVKSSVRKGLLPEILENLLSARKRAKAEL 680
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E+
Sbjct: 681 KK--ETDPFKKQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIERT 737
Query: 1434 ISFV------NENEKWKAKVIYGDTDRYTV 1457
V + + AKVIYGDTD V
Sbjct: 738 KQLVESKYTISNGYQADAKVIYGDTDSVMV 767
Score = 53.9 bits (128), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 38/191 (19%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P S + + +DHY+ + G + G +VP+IR++G T G C H+H
Sbjct: 84 PSSETLVFQQIDLDHYLGASVAG-------MPGQLQEKVPIIRMFGVTDNGNSVCCHVHG 136
Query: 66 ALPYLYVPC-----ADIPVQLRQE-------------DDGYMHAISLALEKALKVKGSAG 107
PY YVP ++ + ++E D+ + +++ + + + G G
Sbjct: 137 FAPYFYVPAPNGFKSEFLGEFKRELNSAVLKDMRSNKDNISVTVLAVDITRKENMYGYHG 196
Query: 108 SKRQHVHECSLVRAK-------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGM 154
+ ++ + K G + Q E++I F ++F+VD N+ G
Sbjct: 197 QQSMDFLRITMAMPRLIAPAKRLLEQGFKFGHFPIQGYQSFEANIDFEIRFMVDSNVVGC 256
Query: 155 GHLHLSKLKFR 165
+ L K K+R
Sbjct: 257 CWIELPKDKWR 267
>gi|393226323|gb|EJD34100.1| putative delta DNA polymerase [Auricularia delicata TFB-10046 SS5]
Length = 961
Score = 192 bits (489), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 146/507 (28%), Positives = 236/507 (46%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + PDP+ D + +A + I + KS S+ I
Sbjct: 167 LRILSFDIECAGRKGIFPDPQVDPVIQIASLVTKQGEDKPFIRNVFTLKSCSY------I 220
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+ ++E+ L S + L + DPD+++G++ L +L +RA G+ N + R
Sbjct: 221 AGSDILSFNEEVELLSAWRNFLGTVDPDVIIGYNTTNFDLPYLLKRANARGVQGFNKLGR 280
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
L + + S R D E ++ GR+
Sbjct: 281 L-LHIGTSVKEVHSSSRASGDRDSKE-------------------------CNINGRLQF 314
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++++ M+ E KL Y++ AV+ L + + ++++ +G +R R Y + A
Sbjct: 315 DIFQYMQKEYKLRTYSLNAVSAKFLGEQKEDVHHSIISE-LQNGTPDSRRRLAIYCLKDA 373
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +LSRG Q +V S L+R A YL P
Sbjct: 374 YLPQRLMDKLMCFVNYTEMARVTGVPFNFLLSRGQQIKVISQLMRRAKEDGYLI--PAMK 431
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+ +S E V+ P +G+Y DP+ LDF S+YPS+MIA+N+C+ T + N
Sbjct: 432 EQSSDDQYEG-ATVIPPTTGYYKDPIATLDFSSMYPSIMIAHNICYTTMI--------NR 482
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+S R L V D K P G +V P RKGVLP +LE +LS R VK +K
Sbjct: 483 ATISRLRLVLDV--DYKQT----PQGTFFVNPTRRKGVLPIILEHLLSARKRVKADLKN- 535
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ + + RQLALK+ AN YG+ A F G +PC +++ + GR + K S
Sbjct: 536 -ETDPFKRAVLDGRQLALKISANSVYGFPGASF-GHLPCTDISSTTTAYGREMIAKTKSV 593
Query: 1437 VNENEKWK------AKVIYGDTDRYTV 1457
V ++ + + A+VIYGDTD V
Sbjct: 594 VEDHYRIENGFEHDARVIYGDTDSVMV 620
>gi|383855586|ref|XP_003703291.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Megachile
rotundata]
Length = 1091
Score = 192 bits (489), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 236/510 (46%), Gaps = 66/510 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSD---HAVEIYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D + +A D I+ L C +
Sbjct: 297 FRILSFDIECAGRKGIFPEPNHDPVIQIANMVIKQGDPEPFLRNIFTLDTCAP------I 350
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG +V KE L + + DPDI G++I +L RA HL + N
Sbjct: 351 VG---SQVLSFDKEQMLLEKWADFVRQLDPDIFTGYNINNFDFPYLINRAQHLNVKDFNF 407
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R + I +S++ I + GR ++ GR
Sbjct: 408 LGRI---------------KNI-----------KSVIKTKVIQSKQMGRRENKSVNFEGR 441
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ +++ ++ + KL YT+ AV+ L+ + + ++T+ +G + R R Y +
Sbjct: 442 VPFDLYLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITE-LQNGNPQTRRRLAVYCL 500
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR ++YL P
Sbjct: 501 KDAYLPLRLLDKLMCIFIYMEMARVTGVSIASLLTRGQQIKVVSQLLRKIKDRDYLM--P 558
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
G+ E V+EP+ G+Y DP+ LDF SLYPS+++A+NLC+ T L
Sbjct: 559 GHQGQGGDEQYEG-ATVIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLL------- 610
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
N ++ D D + P+ M++ VRKG+LP +LE +L+ R + K +
Sbjct: 611 -NNESQHKYKID-------PDNVTRTPSNSMFIKANVRKGILPEILENLLTARKVAKAEL 662
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + + ++ + RQ ALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 663 KK--ETDPLKQKVLDGRQYALKVSANSVYGFTGAQV-GKLPCLEISASVTAYGRTMIERT 719
Query: 1434 ISFVNEN------EKWKAKVIYGDTDRYTV 1457
V + K A VIYGDTD V
Sbjct: 720 KQEVEDQFCVLKGYKNDAVVIYGDTDSVMV 749
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 39/188 (20%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
D P + + + IDHY P+PG + G K+ VP++R+YG T G C H
Sbjct: 71 DLNPQKDALIFQQIEIDHYNGAPLPG-------MPGSKLAPVPIMRMYGITEQGNSVCCH 123
Query: 63 IHRALPYLYVP---------CAD--------IPVQLRQEDDGYMHAISLALEKALK--VK 103
+H PY Y C+ + +R + A+ LA+E+ K +
Sbjct: 124 VHGFCPYFYTTAPHNFNDAHCSRFKDALDKAVLKDMRSNPEKVQIAV-LAVERVYKQNMY 182
Query: 104 GSAGSKR-----------QHVHECS-LVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
G G+++ + + C L+ + FD + + ES+I F ++F+VD ++
Sbjct: 183 GYTGNEKSLFLKITVALPRLIAPCKRLLEKETILPDFDHNYRTFESNIDFDIRFMVDTSV 242
Query: 152 YGMGHLHL 159
G + L
Sbjct: 243 VGCSWIEL 250
>gi|85103616|ref|XP_961558.1| DNA polymerase delta catalytic subunit [Neurospora crassa OR74A]
gi|18376276|emb|CAD21389.1| probable DNA-directed DNA polymerase III [Neurospora crassa]
gi|28923105|gb|EAA32322.1| DNA polymerase delta catalytic subunit [Neurospora crassa OR74A]
Length = 1104
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 239/509 (46%), Gaps = 64/509 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P++DS+ +A + + + + S I
Sbjct: 306 LRILSFDIECAGRKGIFPEPQHDSVIQIANIVTKYGEKKPFVRNVFCLDTTS------PI 359
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ +E + + L DPDI++G++I +L +RA HL + + SR
Sbjct: 360 VATQILSFDREEDMLREWRNFLEQVDPDIIIGYNIANFDFPYLLDRAKHLKVKDFDFWSR 419
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
T + S A ++ S + + G + GR+ L
Sbjct: 420 TRVRS--VAKETNFSSK-------------------------QMGNRDTKATNTNGRLQL 452
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y + A
Sbjct: 453 DMLQLVQRDYQLRSYTLNSVCSHFLGEQKEDVHHSMITELFEGTP-ESRRRLALYCLKDA 511
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q + P
Sbjct: 512 YLPQRLMDKLSCLENYTEMARVTGVPFNFLLARGQQVKFLSQLFRKALEQKL--VIPNLR 569
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+S+ E V+EP G+Y P+ LDF SLYPS+M A+NLC+ T + K
Sbjct: 570 PESSEEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLIKK-------- 620
Query: 1317 LGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
D+ KDE ++ PNG M+V K RKG+L ++LEE+LS R KQA ++
Sbjct: 621 -------RDIERWDLKKDEDYIVTPNGDMFVTTKQRKGLLAQILEELLSAR---KQAKRE 670
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + + N RQLALK+ AN YG T A +G++PC E+A S+ GR +E+
Sbjct: 671 LAVEKDPFKKAVLNGRQLALKVSANSVYGLTGAT-NGKLPCLEIASSVTSFGRQMIERTK 729
Query: 1435 SFVNEN------EKWKAKVIYGDTDRYTV 1457
V E A+VIYGDTD V
Sbjct: 730 KEVEERYTIANGYSHDAQVIYGDTDSVMV 758
>gi|255731752|ref|XP_002550800.1| DNA polymerase delta catalytic subunit [Candida tropicalis MYA-3404]
gi|240131809|gb|EER31368.1| DNA polymerase delta catalytic subunit [Candida tropicalis MYA-3404]
Length = 1079
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 238/516 (46%), Gaps = 74/516 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ ++D + +A + + S+ R++ +
Sbjct: 284 LRILSFDIECAGRKGIFPEAKHDPVIQIANVVQRSGE------------SKPFIRNVFTV 331
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C ++F KE + H+ + +C DPD+++G++ + ++ RA L
Sbjct: 332 GSCSPIIGSQIFSHEKEEDMLMHWKEFICEVDPDVIIGYNTANFDIPYVLRRAEAL---- 387
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLH 1129
+ + P ++ + EI KD++ +G ++
Sbjct: 388 --KLPKFPFFGRLKSVKQEI---------------------KDSVFSSRAYGTRENKVVN 424
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GR+ L++ + + E KL YT+ +V+ L + + ++T +G R R
Sbjct: 425 IDGRMQLDLLQFINREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGNSETRRRLA 483
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L L ++++L + +E+ARV G+ F +LSRG Q +V S L R ++
Sbjct: 484 VYCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVISQLFRKCLQED-- 541
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ P + E V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 542 VVIPNLRSEGTNEEYEG-ATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNK- 599
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
G++ +D+ PNG +V +R+G+LP +L E+L+ R
Sbjct: 600 --KSIQAYGLT------------EDDYTKTPNGDYFVKSSLRQGILPTILNELLTARKKA 645
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +KK + + N RQLALK+ AN YG+T A G++PC ++ S+ GR
Sbjct: 646 KADLKK--ETDPFKKDVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGREM 702
Query: 1430 LEKAISFVNE------NEKWKAKVIYGDTDRYTVCI 1459
+EK + V + + AKVIYGDTD VC
Sbjct: 703 IEKTKNVVQDYYSKKNGHPYDAKVIYGDTDSVMVCF 738
>gi|452823008|gb|EME30022.1| DNA polymerase delta subunit 1 [Galdieria sulphuraria]
Length = 1070
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 149/509 (29%), Positives = 243/509 (47%), Gaps = 68/509 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+ +LS +++ R + P+P +D + +A Y+ KSE R+++ +
Sbjct: 275 IRILSFDIECAGRPGVFPEPEHDQVIQIA------------NYMTETGKSEPIARTVLTL 322
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C KV E L ++ LC+ DPDIL G++I L +L RA+ L
Sbjct: 323 GSCAPIAGAKVLSFDSEAELLEAWVSFLCATDPDILTGYNIVNFDLPYLLNRASVL---- 378
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+S P ++ G+ M ++ L+ A +G + +
Sbjct: 379 --HLSSFPFLGRLM---------GVMTKM------HDTRLSSSA-----FGTHESKAFTM 416
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GRI++++ +++ + KL Y++ +V+ L + + ++T+ F G R R
Sbjct: 417 NGRIIVDMLQILVRDYKLRSYSLNSVSFEFLGEQKEDVHHSIITELF-HGNENTRRRLAV 475
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L +M +L + ELARV GI +LSRG +V S+L R A ++ L
Sbjct: 476 YCLKDAYLPHRLMEKLMSLTNYMELARVAGIPLAWLLSRGHMIKVVSLLHRKAFPESLLI 535
Query: 1251 ISPGNHQVASQPAMECL--PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
N S E V+EP+ GFY P+ LDF SLYPS+M+A+N+C+ T + K
Sbjct: 536 PDLKNTSHNSSEEAESYEGATVIEPKRGFYKMPIATLDFASLYPSIMMAHNICYSTLVRK 595
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
V +P ++ + P+G YV P V+KGVL ++LE++LS R +
Sbjct: 596 D--------RVKYLKP---------EDYIKSPSGDCYVRPSVKKGVLSKILEDLLSARKV 638
Query: 1369 VKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+ +++ + L + N RQLALK+ AN YG+T A G++PC E++ SI GR
Sbjct: 639 AKRELEQ--ATDPFLRSVLNGRQLALKISANAVYGFTGAS-RGKLPCTEISASITAFGRR 695
Query: 1429 TLEKAISFVNENEKWKAKVIYGDTDRYTV 1457
+E S V E++ + VIYGDTD V
Sbjct: 696 MIETTKSLV-ESKFPSSVVIYGDTDSVMV 723
>gi|291190618|ref|NP_001167152.1| DNA polymerase delta catalytic subunit [Salmo salar]
gi|223648376|gb|ACN10946.1| DNA polymerase delta catalytic subunit [Salmo salar]
Length = 1105
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 241/509 (47%), Gaps = 65/509 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + + I + +S S S+VG
Sbjct: 314 LRVLSFDIECAGRKGIFPEAEKDPVIQIASMVQRQGEKEPFIRTVFTLQSCS---SIVG- 369
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V +KE L + + + + D DI+ G++IQ L +L RAA L + L + R
Sbjct: 370 --SQVLCFTKESQLLQSWAEFVRTVDADIITGYNIQNFDLPYLLNRAATLKVNLFPYLGR 427
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+GI +S+L + + GR L++ GR+
Sbjct: 428 V---------------QGI-----------KSVLRDSSFQSKQMGRRENKILNMEGRVQF 461
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y + A
Sbjct: 462 DLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLKDA 520
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--AISPG 1254
L L ++ +L + E+ARV G+ +LSRG Q +V S LLR A Q + + P
Sbjct: 521 YLPLRLLQKLMCVINYMEMARVTGVPLTYLLSRGQQIKVVSQLLRQAMKQGLVMPVVKPE 580
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ + V+EPE G+Y+ P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 581 GGEDYTGAT------VIEPEKGYYSVPIATLDFSSLYPSIMMAHNLCYTTLLQK---GSA 631
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
LG++ ++ + P G ++V VRKG+LP +LE++LS R K +K
Sbjct: 632 EKLGLNP------------EDFIKTPTGDLFVKSSVRKGLLPDILEDLLSARKKAKAELK 679
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
+ ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E+
Sbjct: 680 N--ETDPFKKQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIEQTK 736
Query: 1435 SFVNEN------EKWKAKVIYGDTDRYTV 1457
V + AKVIYGDTD V
Sbjct: 737 QLVESKYTIANGYQADAKVIYGDTDSVMV 765
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/338 (19%), Positives = 128/338 (37%), Gaps = 67/338 (19%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
PDS+ + + +D+Y+ + G + G VP+IR++G T +G C H+H
Sbjct: 84 PDSDTLVFQQIDLDYYLGAAVAG-------MPGQSQGNVPIIRMFGVTDSGNSVCCHVHG 136
Query: 66 ALPYLYVPC-----ADIPVQLRQE-------------DDGYMHAISLALEKALKVKGSAG 107
PY Y+P +D + ++E D+ + +++ + + + G G
Sbjct: 137 FAPYFYIPAPNGFTSDHLSEFKRELNSAVLKDMRSNKDNMSVTVLAVDITRKETMYGYHG 196
Query: 108 SKRQHVHECSLVRAK-------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGM 154
+ ++ + K G +S +E++I F ++F+VD ++ G
Sbjct: 197 KRIVDFLRITMAMPRLIAPAKRLLEQGFKFGPFPIQSFSSYEANIDFEIRFMVDSDVVGC 256
Query: 155 GHLHLSKLKFRHPV------PDAFFPRKFNYS------------SKQASADFQVIGCGSY 196
+ L K K+R DA +P K + S A ++Q I
Sbjct: 257 CWIELPKGKYRVRAERKVGETDAHYPGKVSLCQYEVDVGWTQLISHPAEGEYQRIA---- 312
Query: 197 PMHLMGHQIKTLSGLNIKVFLSLKEMLQWMVCLIHCSATDIFASSIFLYDDCVGDIVNQR 256
P+ ++ I+ I ++Q + + F ++F C IV +
Sbjct: 313 PLRVLSFDIECAGRKGIFPEAEKDPVIQIASMVQRQGEKEPFIRTVFTLQSC-SSIVGSQ 371
Query: 257 LMMYTSLSQTRSDVKMVQSLVPIWEVCSHPIYKLFNIQ 294
++ +T SQ ++QS I +NIQ
Sbjct: 372 VLCFTKESQ------LLQSWAEFVRTVDADIITGYNIQ 403
>gi|66511388|ref|XP_623795.1| PREDICTED: DNA polymerase delta catalytic subunit [Apis mellifera]
Length = 1105
Score = 192 bits (487), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 236/506 (46%), Gaps = 66/506 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D + +A + + +S+ + I+ L C +
Sbjct: 311 FRILSFDIECAGRKGIFPEPNHDPVIQIANMVIKQGESEPFLRNIFTLDTCAP------I 364
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V E + + + DPDI G++I +L RA HL +
Sbjct: 365 VG---CQVLSFETEHKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRANHLNVRDFYF 421
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R + I +S++ + + GR ++ GR
Sbjct: 422 LGRI---------------KNI-----------KSVIKTQVLQSKQMGRRENKSINFEGR 455
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R Y +
Sbjct: 456 VPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGNAQTRRRLAVYCL 514
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR ++YL P
Sbjct: 515 KDAYLPLRLLDKLMCIFIYMEMARVTGVSISSLLTRGQQIKVVSQLLRKTREKDYLM--P 572
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
+ AS E V+EP+ G+Y DP+ LDF SLYPS+++A+NLC+ T + +K
Sbjct: 573 VHRVQASDEQFEG-ATVIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLIKYDKQAK 631
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
N D + I PN +V +RKG+LP +LE +LS R K +
Sbjct: 632 NNIQS---------------DNITITPNDSKFVKVNIRKGILPEILENLLSARKAAKAEL 676
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK S + ++ + RQ ALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 677 KKETDS--LKQKVLDGRQYALKVSANSVYGFTGAQM-GKLPCLEISASVTAYGRNMIEQT 733
Query: 1434 ISFVNEN------EKWKAKVIYGDTD 1453
V E K A V+YGDTD
Sbjct: 734 KQEVEEQYCISKGYKNNAMVVYGDTD 759
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 41/188 (21%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
+ Q D+ IF + + IDHY P+PG + G + VP++R++G T G C H
Sbjct: 87 NPQKDALIF--QQIEIDHYSGIPLPG-------MPGSNMPPVPIMRMFGVTELGNSVCCH 137
Query: 63 IHRALPYLYVPCAD-----------------IPVQLRQEDDGYMHAISLALEKALK--VK 103
+H PYLYV I +R + A+ LA+E+ K +
Sbjct: 138 VHGFSPYLYVIAPTNFNDHHCKLFKEALDKAILKDMRSNPENIQIAV-LAVERVFKQNMY 196
Query: 104 GSAGSKR-----------QHVHEC-SLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
G G ++ + V C +V + + F ES+I F ++F+VD ++
Sbjct: 197 GYTGDEKSLFLKITLALPRLVSRCKKIVEEETILSEFKHQYTAFESNIDFDIRFMVDTSV 256
Query: 152 YGMGHLHL 159
G + L
Sbjct: 257 VGCSWIEL 264
>gi|324120686|dbj|BAJ78734.1| DNA polymerase delta catalytic subunit [Pedetontus unimaculatus]
Length = 1035
Score = 192 bits (487), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 154/511 (30%), Positives = 243/511 (47%), Gaps = 68/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+LS +++ R + P+P +D + N+V E D ++ L C
Sbjct: 243 FRILSFDIECAGRKGIFPEPNHDPVIQIGNMVIRQGEQDP-FIRNVFTLGTCAP------ 295
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG C+V +KE L + + DPDI+ G++I +L RA HLG+
Sbjct: 296 IVG---CEVLSFTKEAELLKRWADFVREADPDIVTGYNINNFDFPYLLNRAQHLGVKDFP 352
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ R I D VV E++L + GR ++ G
Sbjct: 353 FLGR------------------IKD---IRTVVKETVLQSKQL-----GRRENKSINTEG 386
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R++ ++ ++ E KL YT+ AV+ L+ + + +++ +G + R R Y
Sbjct: 387 RVLFDLLLVLVREYKLRSYTLNAVSFHFLQEQKEDVQHSIISD-LQNGNSQTRRRLAVYC 445
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ + L L ++++L I E+ARV G+ S+L+RG Q +V S LLR A +++ +
Sbjct: 446 LKDSYLPLRLLDKLMCIINYMEMARVTGVSLPSLLTRGQQIKVVSQLLRKAREKDF--VI 503
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P S E V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 504 PTYQGTGSDEQYEG-ATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLQ---PG 559
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
N L ++ PD ++ P G M+V VRKG+LP +LE +L+ R K+
Sbjct: 560 WVNKLQLT---PDRYIE---------TPAGAMFVKASVRKGLLPEILESLLAARKKAKED 607
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+KK + + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 608 LKK--ETDPLRCKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAFGRQMIEF 664
Query: 1433 AI-----SFVNEN-EKWKAKVIYGDTDRYTV 1457
F EN AKVIYGDTD V
Sbjct: 665 TKQQVENKFTVENGYSHDAKVIYGDTDSVMV 695
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P N + + IDHY+ P+ G + G + VPV+R+YG T G C HIH
Sbjct: 18 PKKNSLIFQQLDIDHYIGRPLAG-------MPGAQTGPVPVMRMYGVTAEGNSVCCHIHG 70
Query: 66 ALPYLYV 72
PY YV
Sbjct: 71 FSPYFYV 77
>gi|448103715|ref|XP_004200106.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
gi|359381528|emb|CCE81987.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
Length = 1079
Score = 192 bits (487), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/511 (28%), Positives = 235/511 (45%), Gaps = 68/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+ DS+ NVV+ E+ ++ + C S
Sbjct: 287 LRVLSFDIECSGRKGIFPEADQDSVIQIANVVSKTGESKP-FVRNVFTVNTCAS------ 339
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I ++F E + H+ + DPDI++G++I L +L +RA LG+
Sbjct: 340 ---IIGSQIFEHETEEEMLMHWRDFIVDVDPDIIIGYNIANFDLPYLIDRAKALGLSDFP 396
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
R P K D+ S R +G +++ G
Sbjct: 397 FFGRLP-SVKQEVKDTVFSSRA-------------------------YGTRENKVVNIDG 430
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ +V+ L + + ++T +G R R Y
Sbjct: 431 RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGNRETRRRLAVYC 489
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R N +
Sbjct: 490 LKDAYLPLRLMEKLMCLVNYTEMARVTGVPFSYLLARGQQIKVISQLFRKCLEDN--IVI 547
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P + E +V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 548 PNMKSEGTNEDYEG-AIVIEPVRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNK---Q 603
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
NTL + +D+ + PNG +V RKG+LP +L+E+L+ R K
Sbjct: 604 TINTLNLK------------EDDYTLTPNGDYFVKDHKRKGILPTILKELLTARKKAKAD 651
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+KK + + N RQLALK+ AN YG+T A G++PC ++ S+ GR +EK
Sbjct: 652 LKK--ETDPFKKDVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGREMIEK 708
Query: 1433 AISFVNENEKWK------AKVIYGDTDRYTV 1457
+ V E+ K ++VIYGDTD V
Sbjct: 709 TKNEVQEHYSIKNGFPFDSQVIYGDTDSVMV 739
>gi|951001|emb|CAA61282.1| DNA-directed DNA polymerase III [Candida albicans]
Length = 1038
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 240/508 (47%), Gaps = 62/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A + + + + + S S++G
Sbjct: 244 LRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKPFVRNVFTVNTCS---SIIG- 299
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++F +E + H+ + + DPD+++G++ + ++ RA LG LND
Sbjct: 300 --SQIFEHQREEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALG---LNDF-- 352
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVGGRIV 1135
P ++ EI KDA+ +G +++ GR+
Sbjct: 353 -PFFGRLKRVKQEI---------------------KDAVFSSRAYGTRENKVVNIDGRMQ 390
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ + ++ E KL YT+ +V+ L + + ++T +G R R Y +
Sbjct: 391 LDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGTKETRRRLAVYCLKD 449
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L ++++L + +E+ARV G+ F +LSRG Q +V S L R ++ + P
Sbjct: 450 AFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVISQLFRKCLQED--IVIPNL 507
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
S E V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 508 KSEGSNEEYEG-ATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNK---NSIK 563
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
G++ +D+ PNG +V +RKG+LP +L+E+L+ R K +KK
Sbjct: 564 AFGLT------------EDDYTKTPNGDYFVHSNLRKGILPTILDELLTARKKAKADLKK 611
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + N RQLALK+ AN YG+T A G++PC ++ S+ GR +EK +
Sbjct: 612 --ETDPFKKDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGREMIEKTKN 668
Query: 1436 FVNE------NEKWKAKVIYGDTDRYTV 1457
V E + AKVIYGDTD V
Sbjct: 669 EVQEYYSKKNGHPYDAKVIYGDTDSVMV 696
>gi|324120748|dbj|BAJ78765.1| DNA polymerase delta catalytic subunit [Vespa analis insularis]
Length = 1105
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 239/509 (46%), Gaps = 68/509 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R + P+P +D + N+V E + I+ L C +V
Sbjct: 313 ILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGETEP-FLRNIFTLNTCAP------IV 365
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G C+V +KE L + + + DPDI G++I +L RA L +
Sbjct: 366 G---CQVLSFNKEQELLQKWAEFIRQLDPDIFTGYNINNFDFPYLINRAKFLNV------ 416
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
+ G N+ +S++ + + GR ++ GR+
Sbjct: 417 -------------KDFEYLGRIKNI-------KSVIKNQILQSKQMGRREYKIINFEGRV 456
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
++ ++ + KL Y++ AV+ L+ + + ++T +G + R R Y +
Sbjct: 457 PFDLLLVLIRDYKLRSYSLNAVSYHFLQEQKEDVHHSIITD-LQNGNAQTRRRLAVYCLK 515
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
A L L ++++L I E+ARV G+ +L+RG Q +V S LLR +NYL P
Sbjct: 516 DAYLPLRLLDKLMCIIIYMEMARVTGVSLMCLLTRGQQIKVVSQLLRKMREKNYLM--PV 573
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ S E V+EP+ G+Y+DP+ LDF SLYPS+++A+NLC+ T L K+
Sbjct: 574 HTGRGSDEQFEG-GTVIEPKRGYYSDPIATLDFSSLYPSIIMAHNLCYTTLLTS---EKQ 629
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
N G+ DE+ P+ ++V V+KG+LP +LE +L+ R + K +K
Sbjct: 630 NKYGLKI------------DEVTRTPSNSLFVKSTVKKGLLPEILENLLTARKVAKAELK 677
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
K + + ++ + RQ ALK+ AN YG+T A G++PC E++ S+ GR+ +EK
Sbjct: 678 K--ETDPLKQKVLDGRQYALKVSANSVYGFTGAQM-GKLPCLEISASVTAYGRTMIEKTK 734
Query: 1435 SFV------NENEKWKAKVIYGDTDRYTV 1457
V N K A VIYGDTD V
Sbjct: 735 HEVEQHYCINNGYKNDAVVIYGDTDSVMV 763
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 41/198 (20%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
D P + + + + IDHY+ P+PG + G K V ++R++G T G C H
Sbjct: 85 DLNPQIDTLTFQQIDIDHYIGQPLPG-------MPGSKFGPVAIMRMFGVTEQGNSICCH 137
Query: 63 IHRALPYLYV------------PCADIPVQLRQED----DGYMHAISLALEKALK--VKG 104
+H PYL+V P D Q ++D + LA+E K V
Sbjct: 138 VHGFCPYLFVTAPQNFTNAHCKPFKDALDQAVKKDMKSNQNTVQEAILAVEIVYKQTVYT 197
Query: 105 SAGSKRQHVHECSLVRAKKGGAV------------FDKSLQPHESHIPFLLQFLVDYNLY 152
G+ + + ++ K + F+ + P E++I F ++F+VD ++
Sbjct: 198 YTGNDKNAFLKITVALPKFIASCKRLFEKEIVYNEFNHTYTPFETNIDFDIRFMVDTSVV 257
Query: 153 GMGHLHLS----KLKFRH 166
G + L KL+ +H
Sbjct: 258 GCCWIELPPNTWKLRGQH 275
>gi|13124716|sp|P46588.2|DPOD_CANAL RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|3850149|emb|CAA21949.1| DNA polymerase delta [Candida albicans]
Length = 1038
Score = 191 bits (485), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 240/508 (47%), Gaps = 62/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A + + + + + S S++G
Sbjct: 244 LRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKPFVRNVFTVNTCS---SIIG- 299
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++F +E + H+ + + DPD+++G++ + ++ RA LG LND
Sbjct: 300 --SQIFEHQREEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALG---LNDF-- 352
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVGGRIV 1135
P ++ EI KDA+ +G +++ GR+
Sbjct: 353 -PFFGRLKRVKQEI---------------------KDAVFSSRAYGTRENKVVNIDGRMQ 390
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ + ++ E KL YT+ +V+ L + + ++T +G R R Y +
Sbjct: 391 LDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGTKETRRRLAVYCLKD 449
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L ++++L + +E+ARV G+ F +LSRG Q +V S L R ++ + P
Sbjct: 450 AFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVISQLFRKCLQED--IVIPNL 507
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
S E V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 508 KSEGSNEEYEG-ATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNK---NSIK 563
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
G++ +D+ PNG +V +RKG+LP +L+E+L+ R K +KK
Sbjct: 564 AFGLT------------EDDYTKTPNGDYFVHSNLRKGILPTILDELLTARKKAKADLKK 611
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + N RQLALK+ AN YG+T A G++PC ++ S+ GR +EK +
Sbjct: 612 --ETDPFKKDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGREMIEKTKN 668
Query: 1436 FVNE------NEKWKAKVIYGDTDRYTV 1457
V E + AKVIYGDTD V
Sbjct: 669 EVQEYYSKKNGHPYDAKVIYGDTDSVMV 696
>gi|77022890|ref|XP_888889.1| hypothetical protein CaO19_5182 [Candida albicans SC5314]
gi|76573702|dbj|BAE44786.1| hypothetical protein [Candida albicans]
Length = 1038
Score = 191 bits (485), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 240/508 (47%), Gaps = 62/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A + + + + + S S++G
Sbjct: 244 LRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKPFVRNVFTVNTCS---SIIG- 299
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++F +E + H+ + + DPD+++G++ + ++ RA LG LND
Sbjct: 300 --SQIFEHQREEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALG---LNDF-- 352
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVGGRIV 1135
P ++ EI KDA+ +G +++ GR+
Sbjct: 353 -PFFGRLKRVKQEI---------------------KDAVFSSRAYGTRENKVVNIDGRMQ 390
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ + ++ E KL YT+ +V+ L + + ++T +G R R Y +
Sbjct: 391 LDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGTKETRRRLAVYCLKD 449
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L ++++L + +E+ARV G+ F +LSRG Q +V S L R ++ + P
Sbjct: 450 AFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVISQLFRKCLQED--IVIPNL 507
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
S E V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 508 KSEGSNEEYEG-ATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNK---NSIK 563
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
G++ +D+ PNG +V +RKG+LP +L+E+L+ R K +KK
Sbjct: 564 AFGLT------------EDDYTKTPNGDYFVHSNLRKGILPTILDELLTARKKAKADLKK 611
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + N RQLALK+ AN YG+T A G++PC ++ S+ GR +EK +
Sbjct: 612 --ETDPFKKDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGREMIEKTKN 668
Query: 1436 FVNE------NEKWKAKVIYGDTDRYTV 1457
V E + AKVIYGDTD V
Sbjct: 669 EVQEYYSKKNGHPYDAKVIYGDTDSVMV 696
>gi|350397570|ref|XP_003484917.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 1
[Bombus impatiens]
Length = 1090
Score = 191 bits (485), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 241/506 (47%), Gaps = 66/506 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D + +A + + +++ + I+ L C +
Sbjct: 296 FRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEAEPFLRNIFTLDTCAP------I 349
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V KE + + + DPDI G++I +L RA HL +
Sbjct: 350 VG---CQVLSFEKEQKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRAKHLNV----- 401
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ G N+ +S++ + + GR ++ GR
Sbjct: 402 --------------RDFYFLGRIKNI-------KSVIKTQVLQSKQMGRRENKSINFEGR 440
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R Y +
Sbjct: 441 VPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGNAQTRRRLAVYCL 499
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR ++YL P
Sbjct: 500 KDAYLPLRLLDKLMCIFIYMEMARVTGVSICSLLTRGQQIKVVSQLLRKTREKDYLI--P 557
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
+ AS E V+EP+ G+Y+DP+ LDF SLYPS+++A+NLC+ T L +
Sbjct: 558 VHRGQASDEQFEG-ATVIEPKRGYYSDPIATLDFSSLYPSIIMAHNLCYTTLLKR---DT 613
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
E L + S D++ + P+ +V +RKG+LP +LE +LS R K +
Sbjct: 614 EIKLKIDS------------DDITVTPSDSKFVKATLRKGILPEILESLLSARKAAKAEL 661
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + + ++ + RQ ALK+ AN YG+T A G++PC +++ S+ GR+ +E+
Sbjct: 662 KK--ETDPLKQKVLDGRQYALKVSANSVYGFTGAQM-GKLPCLDISASVTAYGRTMIERT 718
Query: 1434 ISFVNEN------EKWKAKVIYGDTD 1453
V E K A V+YGDTD
Sbjct: 719 KQEVEEQYCVSKGYKNDAVVVYGDTD 744
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 41/188 (21%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
+ Q D+ IF + + IDHY P+PG + G + VP++R++G T G C H
Sbjct: 72 NPQKDALIF--QQIEIDHYNGIPLPG-------MPGSNIPPVPIMRMFGVTELGNSVCCH 122
Query: 63 IHRALPYLYVPCAD-----------------IPVQLRQEDDGYMHAISLALEKALK--VK 103
+H PYLYV + +R + A+ LA+E+ K +
Sbjct: 123 VHGFNPYLYVTAPQNFNEHHCRLFKEALNKAMLKDMRSNPENIQEAV-LAVERLYKQNMY 181
Query: 104 GSAGSKR-----------QHVHEC-SLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
G G+++ + V C +V + + F+ + ES+I F ++F+VD ++
Sbjct: 182 GYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEFNHCYRAFESNIDFDIRFMVDTSV 241
Query: 152 YGMGHLHL 159
G + L
Sbjct: 242 VGCSWIEL 249
>gi|324120724|dbj|BAJ78753.1| DNA polymerase delta catalytic subunit [Zorotypus sp. 154-1]
Length = 999
Score = 191 bits (485), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 144/507 (28%), Positives = 239/507 (47%), Gaps = 68/507 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D I +A + + D++ + ++ L C +
Sbjct: 208 FRILSFDIECAGRKGIFPEPEHDPIIQIANMVIRQGDNEPFIRNVFTLNTCAP------I 261
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V + E + + + DPDI G++I +L RA HL +
Sbjct: 262 VG---CQVLSFNTEQKMLEAWSSFVREVDPDIFTGYNINNFDFPYLINRAKHLKV----- 313
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLHVGG 1132
+ G N+ + + KD +++ + GR + G
Sbjct: 314 --------------KDFEYLGRIKNIRS--------VVKDTVLQSKQMGRRENKTTNFEG 351
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R +V ++ + KL YT+ AV+ L+ + + ++T +G + R R Y
Sbjct: 352 RAPFDVLLVLIRDYKLRSYTLNAVSYHFLQEQKEDVHHNIITD-LQNGNPQTRRRLAVYC 410
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L + ++ +L I E+ARV G+ S+L+RG Q +V S LLR A Q YL
Sbjct: 411 LKDAYLPIRLLEKLMCIINYMEMARVTGVSLSSLLTRGQQIKVVSQLLRKAREQGYLM-- 468
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P V E V+EP+ G+YADP+V LDF SLYPS+M+A+NLC+ T L +
Sbjct: 469 PAYQGVGQDEQFEG-ATVIEPKKGYYADPIVTLDFSSLYPSIMMAHNLCYTTLLQG---N 524
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
++ G++ +D+ L P +V VRKG+LP +LE +L+ R K
Sbjct: 525 AKDKFGLT------------EDQYLKTPTANFFVRKSVRKGLLPEILENLLAARKRAKAD 572
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 573 LKN--ETDPFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISSSVTAFGRTMIEQ 629
Query: 1433 AISFVNENEKWK------AKVIYGDTD 1453
V ++ + A VIYGDTD
Sbjct: 630 TKQEVEQHYNIENGFSHDACVIYGDTD 656
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 46/170 (27%)
Query: 34 SSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAIS 93
SS+ G ++ VPV+R+YG T G C HIH PY YV P + +D
Sbjct: 6 SSMPGSQIGPVPVMRMYGVTMTGLSVCCHIHGFSPYFYVTA---PERFSNKD---CQPFK 59
Query: 94 LALEKALKVKGSAGSKRQHVHECSLV---------------------------------- 119
+L +A V S R+ + E L+
Sbjct: 60 TSLNRA--VLADLRSNREEIKEAILMVEIVHKKSLFGYSDKDRLFIKITVALPRLIAPSK 117
Query: 120 RAKKGGAVFDK----SLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
R + ++D S Q ES+I F ++F+VD N+ G + L K++
Sbjct: 118 RLLEKENIYDACGPHSYQSFESNIDFDIRFMVDTNVLGCTWVELPPKKWK 167
>gi|241993500|ref|XP_002399458.1| DNA polymerase delta catalytic subunit, putative [Ixodes scapularis]
gi|215492989|gb|EEC02630.1| DNA polymerase delta catalytic subunit, putative [Ixodes scapularis]
Length = 1018
Score = 191 bits (485), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 150/508 (29%), Positives = 239/508 (47%), Gaps = 73/508 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P P DS+ N+V E D ++ L C
Sbjct: 226 LRILSFDIECAGRKGIFPVPEKDSVIQIANMVVRQGERDP-FIRNVFTLNTCTP------ 278
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I C+V +E L + + DPD++ G++IQ +L RA HL
Sbjct: 279 ---IAGCEVLCFKREGELLQKWADFVRDVDPDVITGYNIQNFDFPYLINRAKHL------ 329
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLHVG 1131
+++ P +I DS + KD++++ + GR + +
Sbjct: 330 NVTHFPYLGRIR--DSRT-------------------ILKDSVMQSKQMGRRENKVVTME 368
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ ++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y
Sbjct: 369 GRVQFDLLQVLLRDYKLRSYTLNAVSYHFLQEQKEDVQHSIITD-LQNGTDQTRRRLAVY 427
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L L ++++L + E+ARV G+ +LSRG Q +V S LLR A Q+ +
Sbjct: 428 CLKDAMLPLRLLDKLMSVINYMEMARVTGVPLTYLLSRGQQIKVVSQLLRKAAEQDL--V 485
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P H A + V+EP GFY+ P+ LDF SLYPS+M+A+NLC+ T +L
Sbjct: 486 MPTVHSEAGEDFTGA--TVIEPAKGFYSVPIATLDFSSLYPSIMMAHNLCYTT----VLD 539
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
SK+ LR DE + P+G +V VRKG+LP +LE++L+ R K
Sbjct: 540 SKQR-----------EALR--ADEFIRTPSGDHFVKASVRKGLLPEILEDLLAARKKAKT 586
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K S ++ + RQLALK+ AN YG+T A G++PC ++ S+ GR +E
Sbjct: 587 DLKN--ESDPFRKKVLDGRQLALKISANSVYGFTGAQV-GKLPCLAISQSVTAFGRMMIE 643
Query: 1432 KAISFVNENEKWK------AKVIYGDTD 1453
+ V E AKVIYGDTD
Sbjct: 644 QTKREVEERYTRANGYPADAKVIYGDTD 671
Score = 47.0 bits (110), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M +P+ + + +DHY+ P+ + G + VP++R++G T G
Sbjct: 1 MPALRPERESLEFQQIDLDHYLGRPL-------DCMPGMRTGTVPIVRMFGVTDGGHSVL 53
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKAL 100
H+H LPY YV + P ++E + A AL +A+
Sbjct: 54 CHVHGFLPYFYV---EAPAGFKKE---HCRAFKDALNRAV 87
>gi|324120768|dbj|BAJ78775.1| DNA polymerase delta catalytic subunit [Ctenocephalides felis]
Length = 1002
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 240/515 (46%), Gaps = 76/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+P++D + +A V+ + E + R++ +
Sbjct: 208 FRILSFDIECAGRKGIFPEPQHDPVIQIANM------------VITQGEQEPYLRNVFTL 255
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C +V KE L + + DPD+ G++I +L RAAHL +
Sbjct: 256 KSCAPIVGSQVLCYDKEEELLEAWAAFIRELDPDVFTGYNINNFDFPYLLRRAAHLKVKN 315
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ + R + D +S+L + + + GR ++
Sbjct: 316 FDFLGR------------------VRDK--------KSVLKETVLQSKQMGRRENYAINF 349
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ AV+ L+ + + +++ +G + R R
Sbjct: 350 EGRVPFDLLLVLLRDYKLRSYTLNAVSFHFLQEQKEDVHHSIISD-LQAGNEQTRRRLAM 408
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++N+L I E+ARV G+ +L+RG Q +V S LLR + YL
Sbjct: 409 YCLKDAYLPLRLLNKLMCIVNYMEMARVTGVPLGCLLTRGQQIKVVSQLLRKSKEAGYLM 468
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
P S+ E V+EP G+YADPV LDF SLYPS+M+A+NLC+ T I
Sbjct: 469 --PTYSGQGSEEQYEG-ATVIEPRRGYYADPVSTLDFASLYPSIMMAHNLCYTTL---IQ 522
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
P ++ LG++ D++ P+ ++V VRKG+LP +LE +LS R K
Sbjct: 523 PGQKEKLGLTD------------DQVTRTPSNNLFVKSSVRKGLLPEILESLLSAR---K 567
Query: 1371 QAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
+A L + R + + RQLALK+ AN YG+T A GR+PC E++ S+ GR+
Sbjct: 568 KAKADLRDEKDPFKRSVLDGRQLALKISANSVYGFTGAQV-GRLPCLEISGSVTAYGRTM 626
Query: 1430 L-------EKAISFVNENEKWKAKVIYGDTDRYTV 1457
+ E+ + N E A VIYGDTD V
Sbjct: 627 IEQTKQEVERKYTIANGYES-DAVVIYGDTDSVMV 660
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 22 MAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQL 81
+ P+PG + G ++ VP++R++G T G C H+H PYL+V
Sbjct: 1 IGAPLPG-------MPGSQIGPVPIMRMFGITMEGNSICCHVHGFSPYLFVTAP------ 47
Query: 82 RQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSL 118
+ DD + AL KA V S R++V E L
Sbjct: 48 KTFDDSHCEPFKTALNKA--VIADMRSNRENVTEAIL 82
>gi|350397573|ref|XP_003484918.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 2
[Bombus impatiens]
Length = 1104
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 241/506 (47%), Gaps = 66/506 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D + +A + + +++ + I+ L C +
Sbjct: 310 FRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEAEPFLRNIFTLDTCAP------I 363
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V KE + + + DPDI G++I +L RA HL +
Sbjct: 364 VG---CQVLSFEKEQKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRAKHLNV----- 415
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ G N+ +S++ + + GR ++ GR
Sbjct: 416 --------------RDFYFLGRIKNI-------KSVIKTQVLQSKQMGRRENKSINFEGR 454
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R Y +
Sbjct: 455 VPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGNAQTRRRLAVYCL 513
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR ++YL P
Sbjct: 514 KDAYLPLRLLDKLMCIFIYMEMARVTGVSICSLLTRGQQIKVVSQLLRKTREKDYLI--P 571
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
+ AS E V+EP+ G+Y+DP+ LDF SLYPS+++A+NLC+ T L +
Sbjct: 572 VHRGQASDEQFEG-ATVIEPKRGYYSDPIATLDFSSLYPSIIMAHNLCYTTLLKR---DT 627
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
E L + S D++ + P+ +V +RKG+LP +LE +LS R K +
Sbjct: 628 EIKLKIDS------------DDITVTPSDSKFVKATLRKGILPEILESLLSARKAAKAEL 675
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + + ++ + RQ ALK+ AN YG+T A G++PC +++ S+ GR+ +E+
Sbjct: 676 KK--ETDPLKQKVLDGRQYALKVSANSVYGFTGAQM-GKLPCLDISASVTAYGRTMIERT 732
Query: 1434 ISFVNEN------EKWKAKVIYGDTD 1453
V E K A V+YGDTD
Sbjct: 733 KQEVEEQYCVSKGYKNDAVVVYGDTD 758
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 41/188 (21%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
+ Q D+ IF + + IDHY P+PG + G + VP++R++G T G C H
Sbjct: 86 NPQKDALIF--QQIEIDHYNGIPLPG-------MPGSNIPPVPIMRMFGVTELGNSVCCH 136
Query: 63 IHRALPYLYVPCAD-----------------IPVQLRQEDDGYMHAISLALEKALK--VK 103
+H PYLYV + +R + A+ LA+E+ K +
Sbjct: 137 VHGFNPYLYVTAPQNFNEHHCRLFKEALNKAMLKDMRSNPENIQEAV-LAVERLYKQNMY 195
Query: 104 GSAGSKR-----------QHVHEC-SLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
G G+++ + V C +V + + F+ + ES+I F ++F+VD ++
Sbjct: 196 GYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEFNHCYRAFESNIDFDIRFMVDTSV 255
Query: 152 YGMGHLHL 159
G + L
Sbjct: 256 VGCSWIEL 263
>gi|238883420|gb|EEQ47058.1| DNA polymerase delta catalytic subunit [Candida albicans WO-1]
Length = 849
Score = 191 bits (484), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 240/508 (47%), Gaps = 62/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A + + + + + S S++G
Sbjct: 55 LRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKPFVRNVFTVNTCS---SIIG- 110
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++F +E + H+ + + DPD+++G++ + ++ RA LG LND
Sbjct: 111 --SQIFEHQREEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALG---LNDF-- 163
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVGGRIV 1135
P ++ EI KDA+ +G +++ GR+
Sbjct: 164 -PFFGRLKRVKQEI---------------------KDAVFSSRAYGTRENKVVNIDGRMQ 201
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ + ++ E KL YT+ +V+ L + + ++T +G R R Y +
Sbjct: 202 LDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGTKETRRRLAVYCLKD 260
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L ++++L + +E+ARV G+ F +LSRG Q +V S L R ++ + P
Sbjct: 261 AFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVISQLFRKCLQED--IVIPNL 318
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
S E V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 319 KSEGSNEEYEG-ATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNK---NSIK 374
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
G++ +D+ PNG +V +RKG+LP +L+E+L+ R K +KK
Sbjct: 375 AFGLT------------EDDYTKTPNGDYFVHSNLRKGILPTILDELLTARKKAKADLKK 422
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + N RQLALK+ AN YG+T A G++PC ++ S+ GR +EK +
Sbjct: 423 --ETDPFKKDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGREMIEKTKN 479
Query: 1436 FVNE------NEKWKAKVIYGDTDRYTV 1457
V E + AKVIYGDTD V
Sbjct: 480 EVQEYYSKKNGHPYDAKVIYGDTDSVMV 507
>gi|340714998|ref|XP_003396008.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 2
[Bombus terrestris]
Length = 1104
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 237/506 (46%), Gaps = 66/506 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D I + +A I+ L C +
Sbjct: 310 FRILSFDIECAGRKGIFPEPNHDPVIQIANMAIRQGEAEPFLRNIFTLDTCAP------I 363
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V KE + + + DPDI G++I +L RA HL +
Sbjct: 364 VG---CQVLSFEKEQKMLEKWADFVRQLDPDIFTGYNINNFDFTYLINRAKHLNV----- 415
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ G N+ +S++ + + GR ++ GR
Sbjct: 416 --------------KDFYFLGRIKNI-------KSVIKTQVFLSKQMGRRENKSINFEGR 454
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R Y +
Sbjct: 455 VPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGNAQTRRRLAVYCL 513
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR + YL P
Sbjct: 514 KDAYLPLRLLDKLMCIFIYMEMARVTGVSICSLLTRGQQIKVVSQLLRKTREKGYLI--P 571
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
+ AS E V+EP+ G+Y+DP+ LDF SLYPS+++A+NLC+ T L + +
Sbjct: 572 VHRGQASDEQFEG-ATVIEPKRGYYSDPIATLDFSSLYPSIIMAHNLCYTTLLKR---NT 627
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+ L + S D++ + P+ +V +RKG+LP +LE +L+ R K +
Sbjct: 628 QIKLKIDS------------DDITVTPSDSQFVKATLRKGILPEILENLLTARKAAKAEL 675
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + + ++ + RQ ALK+ AN YG+T A G++PC +++ S+ GR+ +E+
Sbjct: 676 KK--ETDPLKQKVLDGRQYALKVSANSVYGFTGAQM-GKLPCLDISASVTAYGRTMIERT 732
Query: 1434 IS------FVNENEKWKAKVIYGDTD 1453
V++ K A V+YGDTD
Sbjct: 733 KQEVEGQYCVSKGYKNDAVVVYGDTD 758
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 41/188 (21%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
+ Q D+ IF + + IDHY P+PG + G + VP++R++G T G C H
Sbjct: 86 NPQKDALIF--QQIEIDHYSGTPLPG-------MPGSNIPPVPIMRMFGVTELGNSVCCH 136
Query: 63 IHRALPYLYVPCAD-----------------IPVQLRQEDDGYMHAISLALEKALK--VK 103
+H PYLYV + +R + A+ LA+E+ K +
Sbjct: 137 VHGFNPYLYVTAPQNFNEHHCKLFKEALNKAMLKDMRSNPENIQEAV-LAVERLYKQNMY 195
Query: 104 GSAGSKR-----------QHVHEC-SLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
G G+++ + V C +V + + F+ ES+I F ++F+VD ++
Sbjct: 196 GYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEFNHCYSAFESNIDFDIRFMVDTSV 255
Query: 152 YGMGHLHL 159
G + L
Sbjct: 256 VGCSWIEL 263
>gi|340714996|ref|XP_003396007.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 1
[Bombus terrestris]
Length = 1090
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 237/506 (46%), Gaps = 66/506 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D I + +A I+ L C +
Sbjct: 296 FRILSFDIECAGRKGIFPEPNHDPVIQIANMAIRQGEAEPFLRNIFTLDTCAP------I 349
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V KE + + + DPDI G++I +L RA HL +
Sbjct: 350 VG---CQVLSFEKEQKMLEKWADFVRQLDPDIFTGYNINNFDFTYLINRAKHLNV----- 401
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ G N+ +S++ + + GR ++ GR
Sbjct: 402 --------------KDFYFLGRIKNI-------KSVIKTQVFLSKQMGRRENKSINFEGR 440
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R Y +
Sbjct: 441 VPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGNAQTRRRLAVYCL 499
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR + YL P
Sbjct: 500 KDAYLPLRLLDKLMCIFIYMEMARVTGVSICSLLTRGQQIKVVSQLLRKTREKGYLI--P 557
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
+ AS E V+EP+ G+Y+DP+ LDF SLYPS+++A+NLC+ T L + +
Sbjct: 558 VHRGQASDEQFEG-ATVIEPKRGYYSDPIATLDFSSLYPSIIMAHNLCYTTLLKR---NT 613
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+ L + S D++ + P+ +V +RKG+LP +LE +L+ R K +
Sbjct: 614 QIKLKIDS------------DDITVTPSDSQFVKATLRKGILPEILENLLTARKAAKAEL 661
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + + ++ + RQ ALK+ AN YG+T A G++PC +++ S+ GR+ +E+
Sbjct: 662 KK--ETDPLKQKVLDGRQYALKVSANSVYGFTGAQM-GKLPCLDISASVTAYGRTMIERT 718
Query: 1434 IS------FVNENEKWKAKVIYGDTD 1453
V++ K A V+YGDTD
Sbjct: 719 KQEVEGQYCVSKGYKNDAVVVYGDTD 744
Score = 53.9 bits (128), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 41/188 (21%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
+ Q D+ IF + + IDHY P+PG + G + VP++R++G T G C H
Sbjct: 72 NPQKDALIF--QQIEIDHYSGTPLPG-------MPGSNIPPVPIMRMFGVTELGNSVCCH 122
Query: 63 IHRALPYLYVPCAD-----------------IPVQLRQEDDGYMHAISLALEKALK--VK 103
+H PYLYV + +R + A+ LA+E+ K +
Sbjct: 123 VHGFNPYLYVTAPQNFNEHHCKLFKEALNKAMLKDMRSNPENIQEAV-LAVERLYKQNMY 181
Query: 104 GSAGSKR-----------QHVHEC-SLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNL 151
G G+++ + V C +V + + F+ ES+I F ++F+VD ++
Sbjct: 182 GYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEFNHCYSAFESNIDFDIRFMVDTSV 241
Query: 152 YGMGHLHL 159
G + L
Sbjct: 242 VGCSWIEL 249
>gi|402223554|gb|EJU03618.1| hypothetical protein DACRYDRAFT_93925 [Dacryopinax sp. DJM-731 SS1]
Length = 1097
Score = 190 bits (483), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 149/515 (28%), Positives = 244/515 (47%), Gaps = 74/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P+ D + N+V E+ S I+ L C +
Sbjct: 300 LRVLSFDIECAGRKGIFPEPQIDPVIQIGNMVTRQGES-SPFIRNIFTLNTCAN------ 352
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG +V KE L S + + DPD+++G++I L +L +RA+ L
Sbjct: 353 IVG---SQVLEFEKEADLLSKWKDFVEEVDPDMIVGYNIANFDLPYLLDRASAL------ 403
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
++ P S+I ++I E + +G + + G
Sbjct: 404 KCNKFPYLSRIKNQKTQIKEAHFSSKA--------------------YGTRDSKETPMEG 443
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ ++M+ + KL YT+ AV L + + ++T+ +G +R R Y
Sbjct: 444 RLQLDMLQVMQRDYKLRSYTLNAVCAEFLGEQKEEVHHSIITE-LQNGTAESRRRLAVYC 502
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA-- 1250
+ + L +M++L +E+ARV G+ F +L RG Q +V S L R A+ YL
Sbjct: 503 LKDSYLPQRLMDKLMSFVNYTEMARVTGVPFNYLLQRGQQIKVISQLYRKANDDGYLVPA 562
Query: 1251 -ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
S G+ +V + A V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 563 VKSEGSDEVQYEGAT-----VIEPEKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLTKE 617
Query: 1310 LPSKENTL-GVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
+ N + GV + PN +V P RKG+LP +LE++++ R
Sbjct: 618 TIDRLNLVEGVDYVK---------------TPNHDYFVTPTRRKGLLPTVLEDLITARKR 662
Query: 1369 VKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K +KK + + + RQLALK+ AN YG+T A G++PC ++ S+ GR
Sbjct: 663 AKADLKK--ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAYGRD 719
Query: 1429 TLEKAISFVNE------NEKWKAKVIYGDTDRYTV 1457
+E+ V + ++W AKVIYGDTD V
Sbjct: 720 MIEQTKQEVEKEYCIASGKEWDAKVIYGDTDSVMV 754
>gi|324120756|dbj|BAJ78769.1| DNA polymerase delta catalytic subunit [Stichotrema asahinai]
Length = 1050
Score = 190 bits (483), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 144/510 (28%), Positives = 241/510 (47%), Gaps = 78/510 (15%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAV-EIYVLLYCKSESHQRSL 1013
LS +++ R + P+P+ D I NVV L S++ + ++ L C H
Sbjct: 259 FLSFDIECAGRKGIFPEPKVDPIIQIANVVRL--HGSSENLICNVFTLGTCAPICH---- 312
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
KV+ SKE + + + + DPD+ G++I +L ERA HL + +
Sbjct: 313 -----AKVYSFSKESDMLEAWAQFVRDIDPDLFTGYNINNFDFPYLIERAKHLSLENFSY 367
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+SR R + + ++ +++ + GR ++ GR
Sbjct: 368 LSRI---------------RNVRS------------ILRENVVQTKVGRRTFKAINFEGR 400
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I +++ +++ ++KL YT+ V + +L + + + ++T +G R R Y V
Sbjct: 401 IPYDMYVIVKRDLKLRSYTLNNVCQEILNEQKEDVHYSIITD-LHNGDEHTRKRLAVYCV 459
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L + ++N L+ E+ARV G+ S+L++G Q +V + LLR NY
Sbjct: 460 KDADLPMRLINHLNCFTNDIEMARVTGVMLTSLLAKGEQVKVVAQLLRHCQAANYFM--- 516
Query: 1254 GNHQVASQPAMECL--PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
HQV + A E V+EP G+Y +P+ LDF SLYPS+MIA+NLC+ T L P
Sbjct: 517 PMHQV-NLDATEQFEGATVIEPIRGYYTNPIATLDFSSLYPSIMIAHNLCYTTLLN---P 572
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ ++ D++ + P +V VR+G+LP++LE +LS R K
Sbjct: 573 GDKARYELTD------------DQISLTPANNQFVKSSVRRGLLPQILESLLSARKRTKL 620
Query: 1372 AIK-KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR--- 1427
+K +L P I + + +QLALK+ AN YG+T A G++PC +++ S+ GR
Sbjct: 621 QLKNELDP---IKKSVLDGKQLALKISANSVYGFTGAQV-GKLPCLQISGSVTAYGRLMI 676
Query: 1428 ----STLEKAISFVNENEKWKAKVIYGDTD 1453
+E + N E A+VIYGDTD
Sbjct: 677 NMTKEEVENHFTVANGYES-NARVIYGDTD 705
Score = 47.0 bits (110), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
DS+ +S +F + + IDHY+ PI D S++G VP++R++GST +G C H
Sbjct: 35 DSESESLVF--QEIEIDHYLGAPINN-DF---SIRGS----VPIMRMFGSTKSGNSVCCH 84
Query: 63 IHRALPYLYV 72
+H PY +
Sbjct: 85 VHGFYPYFMI 94
>gi|449017897|dbj|BAM81299.1| DNA polymerase delta, catalytic subunit [Cyanidioschyzon merolae
strain 10D]
Length = 1084
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 238/510 (46%), Gaps = 72/510 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R + P+P ENDS + ++ Y K+E R++ +
Sbjct: 286 ILSFDIECAGRKGIFPEP------------ENDSVIQIGCHLGEYGKTEPLVRAIFTLGS 333
Query: 1019 C------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
C +V ++E L F L + DPDI+ G++I L +L RA+ +G
Sbjct: 334 CAPVAGVQVISLNREQELLQSFRNFLVAADPDIITGYNIVNFDLPYLLNRASAIGA---- 389
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
SR P +I + + ++ + +G + + G
Sbjct: 390 --SRFPYLGRICRERTTMRRTRLSSS--------------------AFGTHESMTFSIEG 427
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+++++ +++ + KL Y++ +V+ L + + + ++T +G R R Y
Sbjct: 428 RVIMDMLQVIIRDHKLRSYSLNSVSSEFLNEQKEDVHYSIITD-LQAGNEHTRRRLAVYC 486
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA-- 1250
+ A L L +M++L + ELARV G+ +LSRG +V S+L R AH + L
Sbjct: 487 LKDAYLPLRLMDKLMSLTNYMELARVTGVPLDWLLSRGHMVKVVSLLHRKAHEADLLVPD 546
Query: 1251 ---ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
G P E V+EP+ GFY P+ +DF SLYPS+M+AYNLC+ T +
Sbjct: 547 LPRTEAGGRSGDGGPQYEG-ATVIEPKKGFYRTPIATMDFASLYPSIMMAYNLCYSTLV- 604
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
+ V +P D+ + P G +V P VRKG+L +LEE L++R
Sbjct: 605 -------HESDVPKLKP---------DDYIRTPLGHCFVKPSVRKGILSEMLEEFLASRK 648
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+ ++ + L + N RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 649 AAKRDMQN--ATDPFLREVLNGRQLALKISANAVYGFTGASV-GKLPCMEISASVTSYGR 705
Query: 1428 STLEKAISFVNENEKWKAKVIYGDTDRYTV 1457
+ +E S V E A+VIYGDTD V
Sbjct: 706 NMIELTRSTV-ERLYPGAEVIYGDTDSVMV 734
>gi|324120742|dbj|BAJ78762.1| DNA polymerase delta catalytic subunit [Uroleucon nigrotuberculatum]
Length = 1093
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 235/483 (48%), Gaps = 64/483 (13%)
Query: 989 ENDSDHAVEIYVLLYCKSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSFD 1042
E D D ++I ++ +++ R++ + C +V C KE + + + D
Sbjct: 318 EADKDPVIQIANMVQIENKRLIRNVFTLNTCAPIVGSQVISCEKENTMLEKWAAFVRECD 377
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
PDI+ G++I L +L RA HL N + R I D
Sbjct: 378 PDIITGYNINNFDLPYLLNRAKHLHTKNFNFLGR------------------IKD----- 414
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
+S++ + + + GR +++ GR+ +++ ++ + KL Y++ +V+ L+
Sbjct: 415 ---IQSVIREQVLQSKQMGRRENKSVNIDGRVPFDLYLVLVRDYKLRSYSLNSVSYHFLQ 471
Query: 1163 RKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGID 1222
+ + ++T +G + R R Y + A L L+++++L + E+ARV G+
Sbjct: 472 EQKEDVHHSIITD-LQNGTPQTRRRLAVYCLKDAFLPLKLLDKLMCLINYMEMARVTGVP 530
Query: 1223 FFSVLSRGSQYRVESMLLRLAHTQNYL--AISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
S+L+ G Q +V S LLRLA +NY+ ++ G + A V+EP G+YAD
Sbjct: 531 LGSLLTGGQQAKVVSQLLRLAQEKNYIMPTMAGGMQDEQFEGAT-----VIEPIKGYYAD 585
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
P+ LDF SLYPS+M+A+NLC+ T L + +++L +++ P
Sbjct: 586 PIATLDFTSLYPSIMMAHNLCYTTLLSQ---------------KTINLLNLSENDYTKTP 630
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
+G ++ +RKG+LP +LE +LS R K +K + + ++ + RQLALK+ AN
Sbjct: 631 SGSYFLSNSIRKGLLPEILENLLSARKKAKTDLK--SETDPFKKKVLDGRQLALKISANS 688
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN------EKWKAKVIYGDTDR 1454
YG+T A G++PC E++ S+ GR+ +E+ V + + A VIYGDTD
Sbjct: 689 VYGFTGAQV-GKLPCLEISTSVTSYGRTMIERTKQEVEQKYCIANGYEHDAVVIYGDTDS 747
Query: 1455 YTV 1457
V
Sbjct: 748 VMV 750
Score = 42.4 bits (98), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
M + P + + + ++ID+Y+ P+ G + G + VP+ R++G T G C
Sbjct: 72 MKEINPVTESLAFQQLTIDNYIGEPMKG-------MSGAQTGIVPITRMFGITMDGNSVC 124
Query: 61 LHIHRALPYLYV 72
++H PY Y
Sbjct: 125 CNVHGYSPYFYT 136
>gi|324120692|dbj|BAJ78737.1| DNA polymerase delta catalytic subunit [Thermobia domestica]
Length = 1097
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 235/504 (46%), Gaps = 66/504 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSLVG 1015
+LS +++ R + P+P +D I + + + S ++ L C +VG
Sbjct: 306 ILSFDIECAGRKGIFPEPNHDPVIQIANMVVKQGSPEPFVRNVFTLDTCSP------IVG 359
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
C+V SKE + + + DPDI G++I L +L RA HL + + +
Sbjct: 360 ---CQVLSFSKENEMLEKWADFVRELDPDIFTGYNINNFDLPYLLNRAKHLSVKNFHYLG 416
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R I D VV E +L + GR ++ GR+
Sbjct: 417 R------------------IKD---IRSVVKEQVLQSKQL-----GRRENKSINTEGRVP 450
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ ++ + KL YT+ AV+ L+ + + V++ G + R R Y +
Sbjct: 451 FDLLLVLVRDYKLRSYTLNAVSFHFLQEQKEDVHHSVISD-LQHGNSQTRRRLAVYCLKD 509
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L +M++L + E+ARV G+ S+L+RG Q +V S LLR A +++ + P
Sbjct: 510 AYLPLRLMDKLMCLINYMEMARVTGVPLSSLLTRGQQIKVVSQLLRKAREKDF--VIPTY 567
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ + L P +
Sbjct: 568 SGTTQEEQYEG-ATVIEPKKGYYDIPIATLDFSSLYPSIMMAHNLCYTSLLQ---PGMKE 623
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
LG++ D+ P G ++ P VRKG+LP +LE +L+ R K +K
Sbjct: 624 KLGLTP------------DQYTRTPAGNFFIKPSVRKGLLPEILENLLAARKKAKADLKN 671
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 672 --ETDPLRRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIEQTKQ 728
Query: 1436 FVNEN------EKWKAKVIYGDTD 1453
V + A VIYGDTD
Sbjct: 729 EVEQRYCVANGYPHDAVVIYGDTD 752
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 48/200 (24%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
+ +++ DS IF + + IDHY P+ G + G ++ VP++R+YG T G C
Sbjct: 77 LLNTEKDSLIF--QQLDIDHYTGKPLKG-------MPGHQIGPVPIMRMYGVTMEGNSVC 127
Query: 61 LHIHRALPYLYVPCAD-------IPVQ----------LRQEDDGYMHAI-SLALEKALKV 102
H+H PY +V + +P + +R DG A+ ++ L+K +
Sbjct: 128 CHVHGFSPYFFVQVPENFTDNHCLPFKTALNKAILDDMRSNKDGVTEAVLAVELQKKENI 187
Query: 103 KGSAGSKR-----------------QHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQF 145
G G ++ + + E +V A G + Q ES++ F ++F
Sbjct: 188 YGYRGGQKVPFLKVTVALPRLIAPAKRLLEKEVVYAALGTYNY----QAFESNVDFDIRF 243
Query: 146 LVDYNLYGMGHLHLSKLKFR 165
+VD N+ G + L K+R
Sbjct: 244 MVDTNVVGCSWVELPPGKWR 263
>gi|341883861|gb|EGT39796.1| hypothetical protein CAEBREN_11294 [Caenorhabditis brenneri]
Length = 523
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 134/207 (64%), Gaps = 14/207 (6%)
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI----------LPSKE 1314
E L L++EP+S Y DPV+VLDFQSLYPSM+IAYN C+ T LGKI +E
Sbjct: 5 EQLQLILEPQSKVYFDPVIVLDFQSLYPSMVIAYNYCYSTILGKISNLIQMNNESRNREE 64
Query: 1315 NTLGVSSFRP--DLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
LG + P D V E+ P M+V R+GV+P LL EIL+ RIMVK A
Sbjct: 65 IVLGAIKYYPSKDDFVKMVAYKEVCASPLASMFVKKSKREGVVPLLLREILAARIMVKNA 124
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K++ + L RI +ARQLALKL+ANVTYGYTAA +SGRMPCAELAD+I+ GR TLE+
Sbjct: 125 MKRVKSKK--LKRILDARQLALKLVANVTYGYTAANWSGRMPCAELADAILGKGRETLER 182
Query: 1433 AISFVNENEKWKAKVIYGDTDRYTVCI 1459
AI V + + A+VIYGDTD V +
Sbjct: 183 AIEMVQKGDYCGAEVIYGDTDSLFVLV 209
>gi|195127716|ref|XP_002008314.1| GI13419 [Drosophila mojavensis]
gi|193919923|gb|EDW18790.1| GI13419 [Drosophila mojavensis]
Length = 1092
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 246/517 (47%), Gaps = 80/517 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ + D + +A V+ ++E R++ +
Sbjct: 298 LRILSFDIECAGRKGIFPEAKVDPVIQIANM------------VIRQGETEPFIRNVFTL 345
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
+C +V ++E L + + DPDIL G++I + +L RAAHL +
Sbjct: 346 KECAPIIGSQVLCFAQETQLLDKWGAFVREVDPDILTGYNINNFDVPYLLNRAAHLKVKN 405
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R N+ S++ + + + GR ++
Sbjct: 406 FEYLGRI-------------------KNI-------RSVIKEQVLQSKQMGRRENQYVNF 439
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ +++ ++ + KL YT+ AV+ L+ + + ++T +G + R R
Sbjct: 440 EGRVPFDLFFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGDEQTRRRLAM 498
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++ +L I E+ARV G+ S+L+RG Q +V S LLR A T+ +
Sbjct: 499 YCLKDAYLPLRLLGKLMAIVNYMEMARVTGVPLESLLTRGQQIKVLSQLLRKAKTRGF-- 556
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+ T L L
Sbjct: 557 IMPSYTSSGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLL---L 612
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
P ++ LG+S D++ P ++V ++R+G+LP +LE +L+ R K
Sbjct: 613 PGAKDKLGLSD------------DQVERTPANNLFVKAELRRGLLPEILESLLAAR---K 657
Query: 1371 QAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
+A L Q R + + RQLALK+ AN YG+T A G++PC E++ S+ GR+
Sbjct: 658 RAKNDLKVEQDPFKRQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTM 716
Query: 1430 LEKAISFVN---------ENEKWKAKVIYGDTDRYTV 1457
+E + V EN+ A VIYGDTD V
Sbjct: 717 IELTKNEVESHYTRANGYEND---AFVIYGDTDSVMV 750
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 117/284 (41%), Gaps = 53/284 (18%)
Query: 16 VSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVP-- 73
+ +++Y+ P+PG + G ++ VPV+R++G T G C H+H PY Y+
Sbjct: 85 LDVENYVGQPLPG-------MPGAQLGPVPVVRMFGVTMEGNSVCCHVHGFCPYFYIVAP 137
Query: 74 -------CAD--------IPVQLRQEDDGYMHAI-SLALEKALKVKGSAGSKRQHVHECS 117
CA+ + +R D A+ ++ L + L + G G +Q + +
Sbjct: 138 SNFEERHCAELHEALGKKVIADMRSNKDNVQEAVLAVELVQRLNIHGYQGDAKQTYIKIT 197
Query: 118 LVRAKKGGAV------------FD-KSLQPHESHIPFLLQFLVDYNLYGMGHLHLS---- 160
+ + A FD + + E++I F ++F+VD + G + L
Sbjct: 198 VTLPRFVAAASRLLKTTIIMSSFDFQDCRAFENNIDFDIRFMVDTQVVGCNWIELPPGVW 257
Query: 161 KLKFRH--PVPDAFFPRKFN-----YSSKQASADFQVIGCGSYPMHLMGHQIKTLSGLNI 213
+L+ R+ P P++ + + + S + ++ + P+ ++ I+ I
Sbjct: 258 RLRGRNSKPAPESRCQLEVDVAYDQFISHEPEGEWSKVA----PLRILSFDIECAGRKGI 313
Query: 214 KVFLSLKEMLQWMVCLIHCSATDIFASSIFLYDDCVGDIVNQRL 257
+ ++Q +I T+ F ++F +C I +Q L
Sbjct: 314 FPEAKVDPVIQIANMVIRQGETEPFIRNVFTLKECAPIIGSQVL 357
>gi|281210761|gb|EFA84927.1| DNA polymerase delta catalytic subunit [Polysphondylium pallidum
PN500]
Length = 1999
Score = 189 bits (481), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 146/510 (28%), Positives = 237/510 (46%), Gaps = 72/510 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R + P+P+ D + +A + + I + KS S S+VG
Sbjct: 825 ILSFDIECAGRKGVFPEPKKDPVIQIANVVKIQGEKEPVIRNVFTLKSCS---SIVG--- 878
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
V E L + K + DPDI++G++I L +L ERA L IG + R
Sbjct: 879 AHVISYENEAQLLKEWKKFITKIDPDIIIGYNIANFDLPYLIERARALKIGEFAYLGRIK 938
Query: 1079 LE-SKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLN 1137
SKI DS S + + G + + + GR +
Sbjct: 939 TTISKIK--DSRFSSQNL-------------------------GTRESKEISMPGRTQFD 971
Query: 1138 VWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAK 1197
+ + ++ + KL+ Y++ V+ L+ + + F ++T +G R R Y + A
Sbjct: 972 IMQAIQRDHKLSSYSLNNVSAHFLKEQKEDVHFSIITD-LQNGTDDDRRRLAVYCLKDAM 1030
Query: 1198 LNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQ 1257
L L+++++L +I SE+ARV G+ +L RG +V S L R A ++ + + +
Sbjct: 1031 LPLKLLDKLMLIINYSEMARVTGVPMSYLLGRGESIKVLSQLYRKAMLEDLILPT---QK 1087
Query: 1258 VASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG----KILPSK 1313
V + +V+EP GFY P+ LDF SLYPS+M+A+NLC+ T + K LP+
Sbjct: 1088 VTGKGDKFKGAVVIEPTPGFYDTPIATLDFTSLYPSIMMAHNLCYSTLITQDYIKTLPNT 1147
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
E T + P+G ++ P ++KG+LPR+LEE+L+ R K+ +
Sbjct: 1148 EYT---------------------VTPSGDAFILPNIKKGLLPRILEELLTARKKAKEEL 1186
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
K + + + RQLALK+ AN YG+T A G++PC E++ S+ GR L K
Sbjct: 1187 K--VETDPFKKAVLDGRQLALKISANSVYGFTGARV-GKLPCIEISRSVTAFGREMLYKT 1243
Query: 1434 ISFVN------ENEKWKAKVIYGDTDRYTV 1457
FV AK+IYGDTD V
Sbjct: 1244 RDFVEAKYTIANGYSHDAKIIYGDTDSVMV 1273
>gi|324120750|dbj|BAJ78766.1| DNA polymerase delta catalytic subunit [Protohermes grandis]
Length = 1046
Score = 189 bits (481), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 237/515 (46%), Gaps = 80/515 (15%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDH---AVEIYVLLYCKSESHQRSLVG 1015
+LS +++ R + PDP D I +A + D A ++ L C +H
Sbjct: 252 ILSFDIECAGRPNTFPDPNIDPIIQIANVVQKYGDTELVACNVFTLNTCAPIAH------ 305
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLG---IGLLN 1072
+V+ KE L + ++K + DPD + G++I L ++ +RA HL L
Sbjct: 306 ---AEVYSFDKETDLLNAWVKFIHDVDPDFVTGYNINNFDLPYIIDRAKHLKQQKCSFLG 362
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ P K+ S+ G+ +++ G
Sbjct: 363 RLKSVPSTVKVKTNQSK-----------------------------AMGKRIEKSVNMQG 393
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ +++ +++ + L YT+ A VL + + F +T +G R+R Y
Sbjct: 394 RLAYDMFLVVKRTLSLRSYTLNNSALQVLGEQKEDVHFSQIT-GLQNGDQHTRHRLAVYC 452
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L IM++L+ + ELARV G+ ++L+RG Q +V + LL A YL
Sbjct: 453 IKDAMLPLRIMDRLNSLTNDMELARVSGVTITTLLTRGEQVKVVTQLLSHARHAGYLM-- 510
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P +H AS+ E V+EP+ +Y P+ LDF SLYPS+M+A+NLC+ T + P
Sbjct: 511 PVHHVQASEEQYEG-ATVIEPKKDYYTLPIATLDFSSLYPSIMMAHNLCYTTL---VQPY 566
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ LG+ ++++ P G +V VR G+LP +LE +L R K+A
Sbjct: 567 IIDKLGLK------------EEDITKTPKGNYFVKSSVRCGLLPEILENLLKAR---KRA 611
Query: 1373 IKKLA----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
+LA PS++ + N RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 612 KNELAAETDPSKKA---VLNGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTSYGRE 667
Query: 1429 TLEKAISFVNENEKWK------AKVIYGDTDRYTV 1457
+E V E K A+V+YGDTD V
Sbjct: 668 MIELTRKEVEERFTLKNGYLHDAQVVYGDTDSVMV 702
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 78/200 (39%), Gaps = 57/200 (28%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + + IDHY+ P+ G + G V VPV+R+YG T G H+H
Sbjct: 31 PKRDSLTFQQIEIDHYIGSPMEG-------MPGPTVGSVPVMRMYGVTMDGFNVLCHVHG 83
Query: 66 ALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALK------------------------ 101
PY YV +P D + + L +KAL
Sbjct: 84 FTPYFYV---TLP-------DAFNESDCLPFKKALNKTLCTDSSENNSTPDSVLEVQIVR 133
Query: 102 ---VKGSAGSKRQHVHECSL---------VRAKKGGAVF----DKSLQPHESHIPFLLQF 145
++G G K + + VR + V+ D +P+ES++ F ++F
Sbjct: 134 KKCLQGYKGEKNEKFAMIRVAQPKLISASVRQLENSRVYDAYPDHDYRPYESNVDFDIRF 193
Query: 146 LVDYNLYGMGHLHLSKLKFR 165
+VD N+ G + L K++
Sbjct: 194 MVDMNIKGCCWIELPANKWK 213
>gi|405951999|gb|EKC19859.1| DNA polymerase delta catalytic subunit [Crassostrea gigas]
Length = 1090
Score = 189 bits (481), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 242/507 (47%), Gaps = 69/507 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+LS +++ R + P+P D + N+V E D + ++ RS
Sbjct: 296 FRILSYDIECAGRKGVFPEPDKDPVIQIANMVIRQGERDP----------FIRNVFTLRS 345
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+ +V KE L + + + DPDI+ G++IQ ++ RA HL +
Sbjct: 346 CAPVVGSQVISNEKESDLLKKWAEFVRVVDPDIITGYNIQNFDFPYVINRANHLKVMDFT 405
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ R +R + V+ ES+ + G+ +++ G
Sbjct: 406 FLGR---------------QRDV------RSVIKESMFQ-----SKQMGKRENKVINIEG 439
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y
Sbjct: 440 RVQFDLLQILLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITD-LQNGNDQTRRRLAVYC 498
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++++L + E+ARV G+ +LSRG Q +V S LLR A Q+ + +
Sbjct: 499 LKDAILPLRLLDKLMCVINYMEMARVTGVPLPYLLSRGQQVKVVSQLLRKAKEQDLVLPT 558
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
H+V + E V+EP GFY P+ LDF SLYPS+M+A+NLC+ T L +
Sbjct: 559 ---HKVETGDEYEG-ATVIEPVKGFYDSPIATLDFSSLYPSIMMAHNLCYTTLLSQHSIQ 614
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
KE G++ D+ + P+G ++ + RKG+LP +LE +LS R K
Sbjct: 615 KE---GLTP------------DQYIKTPSGNYFIKTQHRKGLLPEILEHLLSARKKAKAD 659
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E+
Sbjct: 660 LKK--ETDPFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISQSVTAFGRMMIEQ 716
Query: 1433 AISFVNEN------EKWKAKVIYGDTD 1453
++V E+ + AKVIYGDTD
Sbjct: 717 TKTYVEEHYTIANGYQHDAKVIYGDTD 743
Score = 46.6 bits (109), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 5 QPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
+ D + + + +DHY+ +PG + G VPVIR+YG T G HIH
Sbjct: 69 KADKDKLIFQQIDVDHYIGRHLPG-------MPGATQGPVPVIRMYGVTLNGNSVLAHIH 121
Query: 65 RALPYLYVPC 74
PY +VP
Sbjct: 122 GFAPYFFVPA 131
>gi|392300015|gb|EIW11106.1| Pol3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1097
Score = 189 bits (481), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 240/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV++A ++ L C SH
Sbjct: 315 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP-FIRNVFTLNTC---SH--- 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + S++ + DPD+++G++ + +L RA L + N
Sbjct: 368 ---ITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKV---N 421
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D P ++ EI E S+ + A +G +++ G
Sbjct: 422 DF---PYFGRLKTVKQEIKE---------------SVFSSKA-----YGTRETKNVNIDG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 459 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 518 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 575
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 576 PNMQSQASDDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVE 634
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ N + ++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 635 RLNL--------------KIDEDYVITPNGDYFVTTKRRRGILPIILDELISAR---KRA 677
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 678 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 736
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 737 KTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMV 768
>gi|328720536|ref|XP_001948892.2| PREDICTED: DNA polymerase delta catalytic subunit-like [Acyrthosiphon
pisum]
Length = 1093
Score = 189 bits (481), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 235/483 (48%), Gaps = 64/483 (13%)
Query: 989 ENDSDHAVEIYVLLYCKSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSFD 1042
E D D ++I ++ +++ R++ + C +V C KE + + + D
Sbjct: 318 EADKDPVIQIANMVQIENKRLIRNVFTLNTCAPIVGSQVISCEKENTMLEKWAAFVRECD 377
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
PDI+ G++I L +L RA HL N + R I D
Sbjct: 378 PDIITGYNINNFDLPYLLNRAKHLHTKNFNFLGR------------------IKD----- 414
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
+S++ + + + GR +++ GR+ +++ ++ + KL Y++ +V+ L+
Sbjct: 415 ---IQSVIREQVLQSKQMGRRENKSVNIDGRVPFDLYLVLVRDYKLRSYSLNSVSYHFLQ 471
Query: 1163 RKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGID 1222
+ + ++T +G + R R Y + A L L+++++L + E+ARV G+
Sbjct: 472 EQKEDVHHSIITD-LQNGTPQTRRRLAVYCLKDAFLPLKLLDKLMCLINYMEMARVTGVP 530
Query: 1223 FFSVLSRGSQYRVESMLLRLAHTQNYL--AISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
S+L+ G Q +V S LLRLA +NY+ ++ G + A V+EP G+YAD
Sbjct: 531 LGSLLTGGQQAKVVSQLLRLAQEKNYIMPTMAGGMQDEQFEGAT-----VIEPIKGYYAD 585
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
P+ LDF SLYPS+M+A+NLC+ T L + +++L +++ P
Sbjct: 586 PIATLDFTSLYPSIMMAHNLCYTTLLSQ---------------KTINLLNLSENDYTKTP 630
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
+G ++ +RKG+LP +LE +LS R K +K +I ++ + RQLALK+ AN
Sbjct: 631 SGSYFLSNSIRKGLLPEILENLLSARKKAKTDLKSETDPFKI--KVLDGRQLALKISANS 688
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN------EKWKAKVIYGDTDR 1454
YG+T A G++PC E++ S+ GR+ +E+ V + + A VIYGDTD
Sbjct: 689 VYGFTGAQV-GKLPCLEISTSVTSYGRTMIERTKQEVEQKYCIANGYEHDAVVIYGDTDS 747
Query: 1455 YTV 1457
V
Sbjct: 748 VMV 750
>gi|403213728|emb|CCK68230.1| hypothetical protein KNAG_0A05660 [Kazachstania naganishii CBS 8797]
Length = 1095
Score = 189 bits (480), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 178/651 (27%), Positives = 283/651 (43%), Gaps = 107/651 (16%)
Query: 842 SVDSVHKWLLHDDKGASGDMD----KASVEHSSLKGSDIRPVLEEMHQEADEMISTEPTP 897
SVDS+ L G SGD K V H ++ IR E H + S
Sbjct: 188 SVDSIEITLKQSIWGYSGDAKIPFWKVYVTHPAVLNK-IRAAFERGHLSFNSWFS----- 241
Query: 898 DLNGVTAIMHNEGHIAEP-NACADC-LQDISQISGPDGRSKPTPLSQ----------IGF 945
NG T +IA P DC + +S I+ P + K P +Q I
Sbjct: 242 --NGTTTY----DNIAYPLRVMVDCSIVGMSWITLPKTKYKLIPENQKVSTAQLEVTINH 295
Query: 946 QDPASAGAGEQ------LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHA 995
D S A + L +LS +++ R + P+P D + NVV+ A
Sbjct: 296 HDLISHPAEGKWSHTAPLRILSFDIECAGRVGIFPEPEEDPVIQIANVVSEAGAKKP--- 352
Query: 996 VEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGS 1055
+ ++ S I ++F E + SH+ + DPD+++G++
Sbjct: 353 -------FIRNVFTVHSCAPITGSQIFAHDTEQQMLSHWRDFIVEVDPDVIIGYNTTNFD 405
Query: 1056 LGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAI 1115
+ +L RA L ++ P +++ EI KD++
Sbjct: 406 IPYLINRARAL------KVANFPYFGRLSNVKQEI---------------------KDSV 438
Query: 1116 IEDE-WGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLT 1174
+ +G + +++ GR+ L++ + ++ E KL YT+ AV+ L + + ++T
Sbjct: 439 FSSKAYGTRSSKNVNIDGRLQLDLLQFVQREYKLRSYTLNAVSAHFLGEQKEDVHHSIIT 498
Query: 1175 KWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYR 1234
F G R R Y + A L L ++ +L + +E+ARV G+ F +LSRG Q +
Sbjct: 499 DLF-KGDSETRRRLAVYCLKDAYLPLRLLEKLMALVNYTEMARVTGVPFSYLLSRGQQIK 557
Query: 1235 VESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSM 1294
V S L R + + P AS E V+EP G+Y P+ LDF SLYPS+
Sbjct: 558 VVSQLFRKCLEID--TVIPNMQSQASDEQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSI 614
Query: 1295 MIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGV 1354
M+A+NLC+ T K + N + D ++ +I PNG +V K+R+G+
Sbjct: 615 MMAHNLCYTTLCNKATVERMN------LKKD--------EDYIITPNGDYFVTDKLRRGI 660
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRM 1413
LP +L+E++S R +A K L + R + N RQLALK+ AN YG+T A G++
Sbjct: 661 LPIILDELISAR---SRAKKDLRDEKDSFKRDVLNGRQLALKISANSVYGFTGATV-GKL 716
Query: 1414 PCAELADSIVQCGR-------STLEKAISFVNENEKWKAKVIYGDTDRYTV 1457
PC ++ S+ GR + ++K S N K A V+YGDTD V
Sbjct: 717 PCLAISSSVTSFGRDMIMTTKNAVQKKYSIEN-GYKHDAVVVYGDTDSVMV 766
>gi|71005878|ref|XP_757605.1| hypothetical protein UM01458.1 [Ustilago maydis 521]
gi|46097098|gb|EAK82331.1| hypothetical protein UM01458.1 [Ustilago maydis 521]
Length = 1057
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 241/503 (47%), Gaps = 59/503 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A + + + + SH +VG
Sbjct: 266 LRILSFDIECAGRKGIFPEPSVDPVIQIANMVTRQGEPTPFVKNVFTLNTCSH---IVG- 321
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V +KE+ + + K + DPD+++G++I +L +RA L + R
Sbjct: 322 --SQVLSFNKEVDMLEAWTKFVQEVDPDVVIGYNIANFDFPYLLDRAKALKSTKFAYLGR 379
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
++ A D+ S + +G + + GR+ L
Sbjct: 380 ER-GARTEAKDTHFSSKA-------------------------YGTRDSKNTELQGRLQL 413
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ + KL Y++ +V+ L + + ++T+ +GP +R R Y + A
Sbjct: 414 DMLQVMQRDYKLRSYSLNSVSFEFLGEQKEDVHHSLITELQNAGP-ESRRRLAVYCLKDA 472
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L E+ARV G+ F +LSRG Q +V S L R A+ NYL P
Sbjct: 473 YLPQRLMDKLMCFINYIEMARVTGVPFNYLLSRGQQIKVVSQLFRKANEDNYLV--PAYK 530
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
++ E V+EP++G+Y P+ LDF SLYPS+M+A+NLC+ T L K T
Sbjct: 531 GEGTEDQYEG-ATVLEPKAGYYDRPIATLDFASLYPSVMMAHNLCYTTLLDK------KT 583
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ + D ++ +I PN + K+RKG+LP +LE +L+ R K +KK
Sbjct: 584 IDRLELKQD--------EDYVITPNNNYFATKKLRKGLLPTVLENLLAARKRAKADLKK- 634
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ + + RQLALK+ AN YG+T A G++PC E++ S GR +E+ ++
Sbjct: 635 -ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLEISMSTTAYGRQMIEQTKTY 692
Query: 1437 VNEN------EKWKAKVIYGDTD 1453
V ++ ++ A+V+YGDTD
Sbjct: 693 VEKHYTIANGYEYDAEVVYGDTD 715
>gi|343428135|emb|CBQ71665.1| probable DNA polymerase delta catalytic subunit [Sporisorium
reilianum SRZ2]
Length = 1057
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/504 (28%), Positives = 240/504 (47%), Gaps = 61/504 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A + + + + SH +VG
Sbjct: 266 LRILSFDIECAGRKGVFPEPSIDPVIQIANMVTRQGESTPFVKNVFTLNTCSH---IVG- 321
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V +KEI + + K + DPD+++G++I +L +RA L + R
Sbjct: 322 --SQVLSFNKEIDMLEAWTKFVQEVDPDVVIGYNIANFDFPYLLDRAKALKSTKFAYLGR 379
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVGGRIV 1135
ERG+ AKD + +G + + GR+
Sbjct: 380 ---------------ERGVRTE------------AKDTHFSSKAYGTRDSKNTELQGRLQ 412
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ ++M+ + KL Y++ +V+ L + + ++T+ +GP +R R Y +
Sbjct: 413 LDMLQVMQRDYKLRSYSLNSVSFEFLGEQKEDVHHSLITELQNAGP-ESRRRLAVYCLKD 471
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L +M++L E+ARV G+ F +LSRG Q +V S L R A+ NYL P
Sbjct: 472 AYLPQRLMDKLMCFINYIEMARVTGVPFNYLLSRGQQIKVVSQLFRKANEDNYLV--PAY 529
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
++ E V+EP++G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 530 KGEGTEDQYEG-ATVLEPKAGYYDRPIATLDFASLYPSVMMAHNLCYTTLLDK------K 582
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
T+ + D ++ +I PN + K+RKG+LP +LE +L+ R K +KK
Sbjct: 583 TIDRLELKQD--------EDYVITPNNNCFATKKLRKGLLPTVLENLLAARKRAKADLKK 634
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + + RQLALK+ AN YG+T A G++PC E++ S GR +E+ +
Sbjct: 635 --ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLEISMSTTAYGRQMIEQTKT 691
Query: 1436 FVNEN------EKWKAKVIYGDTD 1453
+V + + A+V+YGDTD
Sbjct: 692 YVERHYTIANGYEHDAEVVYGDTD 715
Score = 42.0 bits (97), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 27/150 (18%)
Query: 41 VNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV---------PCADIPVQLRQEDDGY-MH 90
V + P IR+YG T G C HIH LPY Y+ C D L G +H
Sbjct: 82 VGQPPAIRMYGVTVEGHSVCAHIHGFLPYFYIHAPRGFTANTCNDFTNHLNVLFGGRSVH 141
Query: 91 AISLALEKALKVKGSAGSKRQHVHECSL--------VRA--KKGGAVFDKSLQPHES--- 137
+ +K+L G AG + + ++ +R ++G F P ++
Sbjct: 142 KSEIVSKKSL--MGYAGQENVAFIKLTISDLRSLPRIRGSFERGEIGFRDLFTPGDASLT 199
Query: 138 --HIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+I + L+F++D + GM + + ++
Sbjct: 200 YENITYTLRFMIDLKIVGMNWIRVQPANYK 229
>gi|345483424|ref|XP_001602680.2| PREDICTED: DNA polymerase delta catalytic subunit-like [Nasonia
vitripennis]
Length = 1090
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 240/511 (46%), Gaps = 68/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+LS +++ R + P+P D + N+V L E++ I+ L C
Sbjct: 296 FRILSFDIECAGRKGIFPEPNKDPVIQIANMVILQGESEP-FLRNIFTLDTCAP------ 348
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG C+V +KE + + + DPDI G++I +L RA HL +
Sbjct: 349 IVG---CQVLSHNKESTMLEKWADFIRQLDPDIFTGYNINNFDFPYLINRAQHLNV---- 401
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ S G N+ +S++ + + GR ++ G
Sbjct: 402 ---------------RDFSYLGRIKNI-------KSVIKNTVLQSKQMGRRENKSVNFEG 439
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R Y
Sbjct: 440 RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGDSQTRRRLAVYC 498
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR + YL
Sbjct: 499 LKDAYLPLRLLDKLMCIIIYMEMARVTGVSLSSLLTRGQQIKVVSQLLRKTIERGYLI-- 556
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P + S E V+EP+ G+Y DP+ LDF SLYPS+++A+N+C+ T L P+
Sbjct: 557 PVHQGQGSDEQFEG-ATVIEPKRGYYNDPIATLDFSSLYPSIIMAHNICYTTLLS---PA 612
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ V ++++ P +V VRKG+LP +LE +LS R + K
Sbjct: 613 AQKAYEVP------------ENDVTKTPVNSNFVKSNVRKGILPEILESLLSARKVAKAE 660
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+KK + + ++ + RQ ALK+ AN YG+T A G++PC E++ S+ GR+ ++K
Sbjct: 661 LKK--ETDPLKQKVLDGRQYALKVSANSVYGFTGAQ-QGKLPCLEISGSVTAYGRTMIDK 717
Query: 1433 AISFVNENEKWK------AKVIYGDTDRYTV 1457
V + + + A+VIYGDTD V
Sbjct: 718 TKHEVEQQYRKENGYEHDAEVIYGDTDSVMV 748
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 49/205 (23%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
D DS F + + +DHY PIPG + G +V VPVIR+YG T G C H
Sbjct: 72 DPSKDSLFF--QQIEVDHYTDKPIPG-------MPGNRVGSVPVIRMYGVTEQGNSVCCH 122
Query: 63 IHRALPYLYVP---------CADIPVQLR-------QEDDGYMHAISLALE--KALKVKG 104
+H PY +V C L + + + LA++ K V G
Sbjct: 123 VHGFSPYFFVSAPSNFTDAHCRPFKTALNNAVKNDIKSNSENIQEFILAVDIVKRQTVYG 182
Query: 105 SAGSKRQHVHECSLV---------RAKKGGAVFDKSLQPH-----ESHIPFLLQFLVDYN 150
G K+ + ++ R + ++D + PH ES+I F ++F+ D +
Sbjct: 183 YTGDKKSLFLKITVALPRLIAPSKRLLETNVIYD--VLPHTYTAFESNIDFDIRFMADTH 240
Query: 151 LYGMGHLHLS------KLKFRHPVP 169
+ G + L + K+ H +P
Sbjct: 241 MVGCSWIELKPNHWKLRGKYNHNLP 265
>gi|242018791|ref|XP_002429857.1| DNA polymerase delta catalytic subunit, putative [Pediculus humanus
corporis]
gi|212514875|gb|EEB17119.1| DNA polymerase delta catalytic subunit, putative [Pediculus humanus
corporis]
Length = 1096
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 144/510 (28%), Positives = 235/510 (46%), Gaps = 74/510 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+P +D + +A VL +SE R++ +
Sbjct: 302 FRILSFDIECAGRKGIFPEPNHDPVIQIANM------------VLKQGQSEPFIRNIFTL 349
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C +V KE L + + + DPDI G++I +L RA HL +
Sbjct: 350 NSCAPIVGSQVLCFDKETELLKSWGEFVRQVDPDICTGYNISNFDFPYLINRAKHLNVND 409
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R I D + VV +S+L + GR ++
Sbjct: 410 FCFLGR------------------IKD---IKSVVKDSVLQSKQL-----GRRENKNTNI 443
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R
Sbjct: 444 EGRVTFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGNEQTRRRLAV 502
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++ +L E+ARV G+ +L+RG Q +V S LLR ++YL
Sbjct: 503 YCLKDAYLPLRLIEKLMCFINYMEMARVTGVPLSCLLTRGQQIKVVSQLLRKTKEKHYLM 562
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
P ++ V S E V+EP+ G+Y DP+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 563 --PTHNSVGSDEQFEG-ATVIEPKKGYYPDPIATLDFSSLYPSIMMAHNLCYTTLL---- 615
Query: 1311 PSKENTLGVSSFRPDLHVLRDLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
RP + +L+ D+ P+ +V +RKG+LP +LE +L+ R
Sbjct: 616 ------------RPGVKEKLNLEPDKYSTTPSNHFFVKKSIRKGLLPEILENLLTARKKA 663
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GRS
Sbjct: 664 KTDLKN--ETDPFKKQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTSYGRSM 720
Query: 1430 LEKAISFVN------ENEKWKAKVIYGDTD 1453
+E+ V K ++VIYGDTD
Sbjct: 721 IEQTKQEVEMKYNIANGYKHDSEVIYGDTD 750
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 44/188 (23%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
PD + + IDHY PIPG + G +V+ ++R+YG T G C H+H
Sbjct: 77 PDKESLIFQQIEIDHYHGSPIPG-------MPGYQVSPSSIMRMYGVTMEGNSVCCHVHG 129
Query: 66 ALPYLYVPCADIPVQLRQE---------DDGYMHAIS----------LALEKALK--VKG 104
PY YV +P ++ +D M+ I L +E K + G
Sbjct: 130 FAPYFYV---SVPSDFTEDHCKPFKKALNDVVMNDIRSNRENIKEAILDVELVFKQNMFG 186
Query: 105 SAGSKRQHVHECSLVRAKKGGA---VFDKS----------LQPHESHIPFLLQFLVDYNL 151
G K+ + +++ K A + DK Q ES+I F ++F+VD ++
Sbjct: 187 YEGDKKNKFLKVTIILPKLAAACKRLMDKETVYKAFGGYYYQFFESNIDFDIRFMVDTDV 246
Query: 152 YGMGHLHL 159
G + L
Sbjct: 247 VGCSWIEL 254
>gi|365766444|gb|EHN07940.1| Pol3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1097
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 238/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV++A ++ L C
Sbjct: 315 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP-FIRNVFTLNTCSX------ 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + S++ + DPD+++G++ + +L RA L + N
Sbjct: 368 ---ITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKV---N 421
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D P ++ EI E S+ + A +G +++ G
Sbjct: 422 DF---PYFGRLKTVKQEIKE---------------SVFSSKA-----YGTRETKNVNIDG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 459 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 518 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 575
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 576 PNMQSQASDDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVE 634
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ N + ++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 635 RLNL--------------KIDEDYVITPNGDYFVTTKRRRGILPIILDELISAR---KRA 677
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 678 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 736
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 737 KTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMV 768
>gi|324120694|dbj|BAJ78738.1| DNA polymerase delta catalytic subunit [Inocellia japonica]
Length = 1097
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 240/508 (47%), Gaps = 70/508 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D I + + + + ++ L C +
Sbjct: 304 FRILSFDIECAGRKGIFPEPNHDPVIQIANMVVKQGAPEPFLRNVFTLNTCAP------I 357
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V ++E + + + DPD+ G++I L +L RA HL + +
Sbjct: 358 VG---CQVLSFTRENEMLEKWADFVREVDPDVFTGYNINNFDLPYLLNRAKHLTVRNFHY 414
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R I D VV E +L + GR ++ GR
Sbjct: 415 LGR------------------IKD---IRSVVKEQILQSKQL-----GRRENKSINTEGR 448
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ + KL YT+ AV+ L+ + + V++ P + R R Y +
Sbjct: 449 VPFDLLLVLVRDYKLRSYTLNAVSFHFLQEQKEDVHHSVISDLQQGNP-QTRRRLAVYCL 507
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--AI 1251
A L L ++++L + E+ARV G+ S+L+RG Q +V S LLR A ++++ A
Sbjct: 508 KDAYLPLRLLDKLMCMINYMEMARVTGVPLSSLLTRGQQIKVVSQLLRKAREKDFVIPAY 567
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
S G + + A V+EP+ G+Y DP+ LDF SLYPS+M+A+NLC+ + L P
Sbjct: 568 SGGTQEDQYEGAT-----VIEPKRGYYDDPIATLDFSSLYPSIMMAHNLCYTSLLQ---P 619
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ LG++ D+ P G +V VRKG+LP +LE +L+ R K
Sbjct: 620 GVKEKLGLTP------------DQYSRTPAGNFFVKQSVRKGLLPEILENLLAARKKAKA 667
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+KK + + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E
Sbjct: 668 DLKK--ETDPLKCKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIE 724
Query: 1432 KAISFVNEN------EKWKAKVIYGDTD 1453
+ V + K A VIYGDTD
Sbjct: 725 QTKQEVEQRYCVANGYKHDAVVIYGDTD 752
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 42/191 (21%)
Query: 7 DSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRA 66
DS IF + + IDHY P+ G + G ++ VP++R+YG T G C H+H
Sbjct: 83 DSLIF--QQLDIDHYTGKPMKG-------MPGHQIGPVPIMRMYGVTMEGNSVCCHVHGF 133
Query: 67 LPYLYVPCAD-------IPVQ----------LRQEDDGYMHAISLALEKALK--VKGSAG 107
PYL+V + +P + +R +G A+ LA+E +K + G G
Sbjct: 134 SPYLFVQVPETFTDGHCLPFKNALNKAILDDMRSNREGLTEAV-LAVELQMKENIYGYRG 192
Query: 108 SKRQHVHECSLV---------RAKKGGAVF----DKSLQPHESHIPFLLQFLVDYNLYGM 154
K+ + ++ R + V+ + Q ES+I F ++F+VD N+ G
Sbjct: 193 GKKMPFLKITVALPRLIAPARRLLEKEVVYPALGTYNYQAFESNIDFDIRFMVDTNVVGC 252
Query: 155 GHLHLSKLKFR 165
+ L K+R
Sbjct: 253 SWVELPPKKWR 263
>gi|324120730|dbj|BAJ78756.1| DNA polymerase delta catalytic subunit [Reticulitermes speratus]
Length = 1033
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 239/509 (46%), Gaps = 68/509 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSLVG 1015
+LS +++ R + P+P +D I + + + ++ L C +VG
Sbjct: 243 ILSFDIECAGRKGIFPEPEHDPVIQIANMVVQQGQPEPFLRNVFTLNTCAP------IVG 296
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
C+V ++E L + + DPD++ G++I +L RA HL + +
Sbjct: 297 ---CQVLSFTEERELLEKWAAFVREVDPDVITGYNINNFDFPYLINRANHLKVKNFTYLG 353
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R N+ S++ + + GR ++ GR+
Sbjct: 354 RV-------------------KNI-------RSVIKDQVLQSKQMGRRENKSMNCEGRVP 387
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ ++ + KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 388 FDLLLILVRDYKLRSYTLNAVSFHFLGEQKEDVHHSIITD-LQNGNPQTRRRLAVYCLKD 446
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L ++++L + E++RV G+ S+L+RG Q +V S LLR A + YL + G
Sbjct: 447 AYLPLRLLDKLMCVINYMEMSRVTGVSLSSLLTRGQQIKVVSQLLRKAREKGYLMPAYGG 506
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
Q V+EP+ G+Y+DPV LDF SLYPS+M+A+NLC+ T L PS+
Sbjct: 507 ---GVQEEQYEGATVIEPKKGYYSDPVATLDFSSLYPSIMMAHNLCYTTLLQPGAPSR-- 561
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
LG+S D+ + P +V VRKG+LP +LE +L+ R K +K+
Sbjct: 562 -LGLSP------------DQYIKTPASNFFVNKSVRKGLLPEILENLLAARKKAKADLKE 608
Query: 1376 LA-PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
P +Q ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 609 EKDPFRQ---KVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIEQTK 664
Query: 1435 SFVNEN------EKWKAKVIYGDTDRYTV 1457
V ++ K A+VIYGDTD V
Sbjct: 665 QEVEQHYNVANGYKNDAEVIYGDTDSVMV 693
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 71/191 (37%), Gaps = 50/191 (26%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + + IDHY PI G + G + VP++R+YG T G C H+H
Sbjct: 21 PADHALTFQQLDIDHYTGCPIAG-------MPGSQQGPVPIMRMYGVTMEGNSVCCHVHG 73
Query: 66 ALPYLYVPCADIPVQLRQEDDGYMHAISLALEKA------------------------LK 101
PY +V P D H +AL KA L
Sbjct: 74 FSPYFFV---SAPSNFANSD---CHPFKMALNKAVLADMRSNKETVREAVVAVELVQRLN 127
Query: 102 VKGSAGSKRQHVHECSLV---------RAKKGGAVF----DKSLQPHESHIPFLLQFLVD 148
V G G + + +L R + A++ + Q ES+I F ++F+VD
Sbjct: 128 VMGYNGEAKARFIKITLALPRLIAPAKRLLEREAIYPSAGSHTFQAFESNIDFDIRFMVD 187
Query: 149 YNLYGMGHLHL 159
L G + L
Sbjct: 188 TGLVGCSWVEL 198
>gi|195377844|ref|XP_002047697.1| GJ11779 [Drosophila virilis]
gi|194154855|gb|EDW70039.1| GJ11779 [Drosophila virilis]
Length = 1092
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 244/516 (47%), Gaps = 78/516 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ + D + +A V+ +SE R++ +
Sbjct: 298 LRILSFDIECAGRKGIFPEAKMDPVIQIANM------------VIRQGESEPFIRNVFTL 345
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C +V +E L + + DPDIL G++I + +L RAAHL +
Sbjct: 346 KQCAPIIGSQVLSYDQETQLLDKWSAFVREVDPDILTGYNINNFDIPYLLNRAAHLKVKN 405
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R N+ + V+ E +L + GR ++
Sbjct: 406 FEYLGRI-------------------KNIRS--VIKEQMLQ-----SKQMGRRENQYVNF 439
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ +++ ++ + KL YT+ AV+ L+ + + ++T +G + R R
Sbjct: 440 EGRVPFDLFLVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGDEQTRRRLAM 498
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++ +L I E+ARV G+ S+L+RG Q +V S LLR A T+ +
Sbjct: 499 YCLKDAYLPLRLLGKLMAIVNYMEMARVTGVPLESLLTRGQQIKVLSQLLRKAKTKGF-- 556
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+ T L L
Sbjct: 557 IMPSYTSSGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLL---L 612
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
P ++ +G++ D++ P ++V ++R+G+LP +LE +L+ R K
Sbjct: 613 PGTKDKMGLTD------------DQVERTPANNVFVKAELRRGLLPEILESLLAARKRAK 660
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +
Sbjct: 661 NDLK--VETDPFKRQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMI 717
Query: 1431 EKAISFVN---------ENEKWKAKVIYGDTDRYTV 1457
E + V EN+ A VIYGDTD V
Sbjct: 718 ELTKNEVESHYTRANGYEND---AVVIYGDTDSVMV 750
Score = 49.3 bits (116), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 79/185 (42%), Gaps = 38/185 (20%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P ++ + + +++Y+ +PG + G ++ VPV+R++G T G C H+H
Sbjct: 75 PATDCLIFQQLDVENYVGQALPG-------MPGAQLGPVPVVRMFGVTMEGNSVCCHVHG 127
Query: 66 ALPYLYVP---------CAD--------IPVQLRQEDDGYMHAI-SLALEKALKVKGSAG 107
PY Y+ C++ + +R D A+ ++ L + L + G G
Sbjct: 128 YCPYFYITAPRDFEQRHCSELHEALDKKVIADMRGNKDNVQEAVLAVELVQRLNIHGYQG 187
Query: 108 SKRQHVHECSLVRAKKGGAV------------FD-KSLQPHESHIPFLLQFLVDYNLYGM 154
+Q + ++ + A FD + + E++I F ++F+VD ++ G
Sbjct: 188 DDKQTYIKITVTMPRFVAAASRLLKKEVIMSNFDFQDCRAFENNIDFDIRFMVDTHVVGC 247
Query: 155 GHLHL 159
+ L
Sbjct: 248 NWIDL 252
>gi|410902099|ref|XP_003964532.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Takifugu
rubripes]
Length = 1104
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 235/510 (46%), Gaps = 68/510 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + + I + +S + S+VG
Sbjct: 314 LRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFTLQSCA---SIVG- 369
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ ++E L + + L + DPDI+ G++IQ +L RAA L +
Sbjct: 370 --SQILCFTQETKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAATLKVNPF----- 422
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P +I S + + + GR +++ GR+
Sbjct: 423 -PYLGRIRNSKSVLRDLNFQSKQM--------------------GRRENKTMNMEGRVQF 461
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y + A
Sbjct: 462 DLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLKDA 520
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AISP 1253
L L ++ +L + E+ARV G+ +LSRG Q +V S LLR A Q+ + +
Sbjct: 521 YLPLRLLQKLMCVINYMEMARVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTE 580
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
G V+EPE G+Y+ P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 581 GGEDYTG-------ATVIEPEKGYYSIPIATLDFSSLYPSIMMAHNLCYTTLL------- 626
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+NT S P ++ + P G +V VRKG+LP +LE +LS R K +
Sbjct: 627 QNTQDKDSLSP---------EDFIKTPTGNFFVKSSVRKGLLPEILENLLSARKRAKAEL 677
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E+
Sbjct: 678 KK--ETDPFKRQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIEQT 734
Query: 1434 ISFV------NENEKWKAKVIYGDTDRYTV 1457
V + + AKVIYGDTD V
Sbjct: 735 KQLVESKYTISNGYQADAKVIYGDTDSVMV 764
Score = 47.4 bits (111), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 75/192 (39%), Gaps = 40/192 (20%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P ++ + + +D+Y+ G + G + P++R++G T G C HIH
Sbjct: 84 PSTDTLVFQQIDLDYYLGVTAAG-------MPGQSQGKAPIVRMFGVTDNGNSVCCHIHG 136
Query: 66 ALPYLYVPCAD-----------------IPVQLRQEDDGYMHAISLALEKALK--VKGSA 106
PY YVP + + +R D + LA++ A K + G
Sbjct: 137 FAPYFYVPAPNGFTSAHLGEFQKELNSAVLKDMRSNKDN-ISVTVLAVDIARKENMYGYH 195
Query: 107 GSKRQHVHECSLV---------RAKKGGAVFD----KSLQPHESHIPFLLQFLVDYNLYG 153
G + ++ R + G F Q E++I F ++F+VD N+ G
Sbjct: 196 GKRILDFLRITMAMPRLIAPAKRLLEQGLKFGPFPLHYYQAFEANIDFEIRFMVDTNVVG 255
Query: 154 MGHLHLSKLKFR 165
+ L K K+R
Sbjct: 256 CCWIELPKGKYR 267
>gi|443690888|gb|ELT92898.1| hypothetical protein CAPTEDRAFT_165849 [Capitella teleta]
Length = 1052
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/519 (27%), Positives = 239/519 (46%), Gaps = 98/519 (18%)
Query: 960 LSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI--YVLLYCKSESHQRSLVGIP 1017
LS +++ R + P+P D D ++I V+ + E R++ +
Sbjct: 260 LSFDIECAGRKGIFPEP--------------DKDPVIQIANMVIRQGEKEPFIRNVFTLK 305
Query: 1018 DC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI--- 1068
C +V E L + + + DPD++ G++IQ L +L RAAHL +
Sbjct: 306 ACAPIVGAQVLSFESEAELLKKWAEFIREVDPDVITGYNIQNFDLPYLLNRAAHLKVKNF 365
Query: 1069 ---GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTH 1124
G + DI T K+A+++ + G+
Sbjct: 366 DYLGRIKDIKST---------------------------------VKEAMVQSKQMGKRE 392
Query: 1125 ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRA 1184
+++ GR++ ++ +++ + KL YT+ AV+ L + + +++ +G +
Sbjct: 393 NKIINMEGRVIFDLLQVLLRDYKLRSYTLNAVSFHFLEEQKEDVHHSIISD-LQNGSDQT 451
Query: 1185 RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
R R Y + A L L ++++L I E+ARV G+ +LSRG Q +V S LLR A
Sbjct: 452 RRRLAVYCLKDAYLPLRLLDKLMSIINYIEMARVTGVSLGILLSRGQQIKVMSQLLRKAK 511
Query: 1245 TQNYL----AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNL 1300
TQ+ + + G+ + V+EP G+Y PV LDF SLYPS+M+A+NL
Sbjct: 512 TQDLVIPVYKVETGDEFTGAT--------VIEPVRGYYDTPVATLDFASLYPSIMMAHNL 563
Query: 1301 CFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLE 1360
C+ T + PS G+SS D+ + P ++V VRKG+LP +LE
Sbjct: 564 CYTTLITT--PSSIEKEGLSS------------DQYIKTPANSLFVKSTVRKGLLPEILE 609
Query: 1361 EILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
+LS R K +K + + ++ + RQLALK+ AN YG+T A G++PC E++
Sbjct: 610 SLLSARKKAKTELK--SETDPFRKKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISG 666
Query: 1421 SIVQCGRSTLEKAISFVNENEKWK------AKVIYGDTD 1453
S+ GR +E+ FV E K A V+YGDTD
Sbjct: 667 SVTAFGRLMIEQTKQFVEETYTVKNGYKHDAMVVYGDTD 705
Score = 46.2 bits (108), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 16 VSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
+ +D Y+ P+ G + G K +VP++R++G T +G HIH LPY YV
Sbjct: 47 LDLDFYIGDPMSG-------MPGSKSGKVPIVRMFGITASGHSVVTHIHGYLPYFYV 96
>gi|344233498|gb|EGV65370.1| DNA polymerase delta catalytic subunit [Candida tenuis ATCC 10573]
Length = 1060
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 240/529 (45%), Gaps = 78/529 (14%)
Query: 943 IGFQDPAS-AGAGEQLTL-----LSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAV 996
I ++D + A GE L + LS +++ R + P+ +D + +A N
Sbjct: 247 INYKDLVTHASEGEWLKMAPLRILSFDIECAGRKGIFPEAEHDQVIQIANVVSN------ 300
Query: 997 EIYVLLYCKSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWD 1050
Y + + R++ + C ++F KE +F H+ + + DPD+++G++
Sbjct: 301 ------YGEPKPFVRNVFTVNSCSPIIGSQIFSHEKEDEMFMHWKEFVLKVDPDVIIGYN 354
Query: 1051 IQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLL 1110
L +L +RA L + R + K DS S R
Sbjct: 355 TSNFDLPYLLDRARALHLPKFPYFGRMK-QIKQEVKDSVFSSRA---------------- 397
Query: 1111 AKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPF 1170
+G +++ GR+ L++ + ++ E KL YT+ +V+ L + +
Sbjct: 398 ---------YGTRENKVINIEGRMQLDLLQFVQREYKLRSYTLNSVSAEFLGEQKEDVHH 448
Query: 1171 RVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRG 1230
++T +G R R Y + A L L ++ +L + +E+ARV G+ F +LSRG
Sbjct: 449 SIITD-LQNGDAETRRRLAVYCLKDAYLPLRLVEKLMCLVNYTEMARVTGVPFSYLLSRG 507
Query: 1231 SQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSL 1290
Q +V S L R Q+ + P + E V+EP G+Y P+ LDF SL
Sbjct: 508 QQIKVISQLFRKCLEQD--IVIPNMKSEGTNEEYEG-ATVIEPSRGYYDVPITTLDFSSL 564
Query: 1291 YPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKV 1350
YPS+M+A+NLC+ T L K T G++ +D+ ++ PNG +V
Sbjct: 565 YPSIMMAHNLCYTTLLNK---QTIKTFGLN------------EDDYILTPNGDYFVKDNK 609
Query: 1351 RKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFS 1410
R+G+LP +L E+L+ R K +KK + + N RQLALK+ AN YG+T A
Sbjct: 610 RQGILPTILNELLTARKKAKADLKK--ETDPFRKSVLNGRQLALKISANSVYGFTGATI- 666
Query: 1411 GRMPCAELADSIVQCGRSTLEKAISFVNE------NEKWKAKVIYGDTD 1453
G++PC ++ S GR +EK + V E + AKV+YGDTD
Sbjct: 667 GKLPCLAISSSTTAFGRVMIEKTKNEVEEFYSKKNGFDYDAKVVYGDTD 715
>gi|330443503|ref|NP_010181.2| Pol3p [Saccharomyces cerevisiae S288c]
gi|341940645|sp|P15436.4|DPOD_YEAST RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|4191|emb|CAA43922.1| DNA polymerase III catalytic subunit [Saccharomyces cerevisiae]
gi|329138870|tpg|DAA11758.2| TPA: Pol3p [Saccharomyces cerevisiae S288c]
Length = 1097
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 238/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV++A ++ L C
Sbjct: 315 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP-FIRNVFTLNTCSP------ 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + S++ + DPD+++G++ + +L RA L + N
Sbjct: 368 ---ITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKV---N 421
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D P ++ EI E S+ + A +G +++ G
Sbjct: 422 DF---PYFGRLKTVKQEIKE---------------SVFSSKA-----YGTRETKNVNIDG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 459 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 518 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 575
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 576 PNMQSQASDDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVE 634
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ N + ++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 635 RLNL--------------KIDEDYVITPNGDYFVTTKRRRGILPIILDELISAR---KRA 677
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 678 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 736
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 737 KTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMV 768
>gi|259145143|emb|CAY78407.1| Pol3p [Saccharomyces cerevisiae EC1118]
Length = 1097
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 238/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV++A ++ L C
Sbjct: 315 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP-FIRNVFTLNTCSP------ 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + S++ + DPD+++G++ + +L RA L + N
Sbjct: 368 ---ITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKV---N 421
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D P ++ EI E S+ + A +G +++ G
Sbjct: 422 DF---PYFGRLKTVKQEIKE---------------SVFSSKA-----YGTRETKNVNIDG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 459 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 518 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 575
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 576 PNMQSQASDDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVE 634
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ N + ++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 635 RLNL--------------KIDEDYVITPNGDYFVTTKRRRGILPIILDELISAR---KRA 677
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 678 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 736
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 737 KTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMV 768
>gi|195019160|ref|XP_001984922.1| GH16758 [Drosophila grimshawi]
gi|193898404|gb|EDV97270.1| GH16758 [Drosophila grimshawi]
Length = 1095
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 242/516 (46%), Gaps = 78/516 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ + D + +A V+ +SE R++ +
Sbjct: 301 LRILSFDIECAGRRGIFPEAKMDPVIQIANM------------VIRQGESEPFIRNVFTL 348
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C +V +E L + + DPDIL G++I + +L RAAHL +
Sbjct: 349 KQCAPIIGSQVLCYDQETQLLDKWAAFVREVDPDILTGYNINNFDIPYLLNRAAHLKVNN 408
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R R I S++ + + + GR ++
Sbjct: 409 FEYLGRI---------------RNI-----------RSVIKEQVLQSKQMGRRENHYVNF 442
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ +++ ++ + KL Y++ AV+ L+ + + ++T +G + R R
Sbjct: 443 EGRVPFDLYLVLLRDYKLRSYSLNAVSYHFLQEQKEDVHHSIITD-LQNGDEQTRRRLAM 501
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++ +L I E+ARV G+ S+L+RG Q +V S LLR A T+ +
Sbjct: 502 YCLKDAYLPLRLLGKLMAIVNYMEMARVTGVPLESLLTRGQQIKVLSQLLRKAKTKGF-- 559
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+ T L L
Sbjct: 560 IMPSYTSSGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLL---L 615
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
P ++ +G LRD D++ P +V ++R+G+LP +LE +L+ R K
Sbjct: 616 PGAKDKMG----------LRD--DQVEQTPANNRFVKAELRRGLLPEILESLLAARKRAK 663
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 664 NDLK--VETDSFKRQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRVMI 720
Query: 1431 EKAISFVN---------ENEKWKAKVIYGDTDRYTV 1457
E + V EN+ A VIYGDTD V
Sbjct: 721 ELTKNEVESHYTRANGYEND---AVVIYGDTDSVMV 753
Score = 44.3 bits (103), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 39/192 (20%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P S+ + + +++Y P+PG + G ++ VPV+R++G T G C H+H
Sbjct: 77 PLSDNLIFQQLDVENYTGQPLPG-------MPGAQLGPVPVVRMFGVTMEGNSVCCHVHG 129
Query: 66 ALPYLYVP---------CA--------DIPVQLRQEDDGYMHAISLALE--KALKVKGSA 106
Y Y+ CA + +R + + LA+E + L + G
Sbjct: 130 YCSYFYISAPKNFEQRHCAALHEALDRKVIADIRGGNKDKVQEAVLAVELVQRLNIHGYQ 189
Query: 107 GSKRQHVHECSLVRAKKGGA------------VFD-KSLQPHESHIPFLLQFLVDYNLYG 153
G +Q + ++ + A FD + + E++I F ++F+V+ ++ G
Sbjct: 190 GDAKQSYIKITVTLPRFVAAASRLLKNEVIMGAFDFQDCRAFENNIDFDIRFMVETSVVG 249
Query: 154 MGHLHLSKLKFR 165
+ L +R
Sbjct: 250 CNWIELPAGAWR 261
>gi|1199547|emb|CAA64911.1| CDC2 [Saccharomyces cerevisiae]
gi|1431142|emb|CAA98669.1| CDC2 [Saccharomyces cerevisiae]
Length = 1097
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 238/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV++A ++ L C
Sbjct: 315 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP-FIRNVFTLNTCSP------ 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + S++ + DPD+++G++ + +L RA L + N
Sbjct: 368 ---ITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKV---N 421
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D P ++ EI E S+ + A +G +++ G
Sbjct: 422 DF---PYFGRLKTVKQEIKE---------------SVFSSKA-----YGTRETKNVNIDG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 459 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 518 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 575
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 576 PNMQSQASDDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVE 634
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ N + ++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 635 RLNL--------------KIDEDYVITPNGDYFVTTKRRRGILPIILDELISAR---KRA 677
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 678 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 736
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 737 KTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMV 768
>gi|323355835|gb|EGA87648.1| Pol3p [Saccharomyces cerevisiae VL3]
Length = 1097
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 238/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV++A ++ L C
Sbjct: 315 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP-FIRNVFTLNTCSP------ 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + S++ + DPD+++G++ + +L RA L + N
Sbjct: 368 ---ITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKV---N 421
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D P ++ EI E S+ + A +G +++ G
Sbjct: 422 DF---PYFGRLKTVKQEIKE---------------SVFSSKA-----YGTRETKNVNIDG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 459 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 518 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 575
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 576 PNMQSQASDDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVE 634
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ N + ++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 635 RLNL--------------KIDEDYVITPNGDYFVTTKRRRGILPIILDELISAR---KRA 677
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 678 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 736
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 737 KTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMV 768
>gi|256274101|gb|EEU09012.1| Pol3p [Saccharomyces cerevisiae JAY291]
Length = 1097
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 238/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV++A ++ L C
Sbjct: 315 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP-FIRNVFTLNTCSP------ 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + S++ + DPD+++G++ + +L RA L + N
Sbjct: 368 ---ITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKV---N 421
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D P ++ EI E S+ + A +G +++ G
Sbjct: 422 DF---PYFGRLKTVKQEIKE---------------SVFSSKA-----YGTRETKNVNIDG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 459 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 518 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 575
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 576 PNMQSQASDDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVE 634
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ N + ++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 635 RLNL--------------KIDEDYVITPNGDYFVTTKRRRGILPIILDELISAR---KRA 677
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 678 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 736
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 737 KTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMV 768
>gi|151941901|gb|EDN60257.1| DNA polymerase III catalytic (delta) subunit [Saccharomyces
cerevisiae YJM789]
Length = 1097
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 238/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV++A ++ L C
Sbjct: 315 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP-FIRNVFTLNTCSP------ 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + S++ + DPD+++G++ + +L RA L + N
Sbjct: 368 ---ITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKV---N 421
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D P ++ EI E S+ + A +G +++ G
Sbjct: 422 DF---PYFGRLKTVKQEIKE---------------SVFSSKA-----YGTRETKNVNIDG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 459 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 518 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 575
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 576 PNMQSQASDDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVE 634
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ N + ++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 635 RLNL--------------KIDEDYVITPNGDYFVTTKRRRGILPIILDELISAR---KRA 677
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 678 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 736
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 737 KTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMV 768
>gi|324120690|dbj|BAJ78736.1| DNA polymerase delta catalytic subunit [Nipponatelura sp. 66-1]
Length = 1006
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 236/508 (46%), Gaps = 66/508 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSLVG 1015
+LS +++ R + P+P++D I + + + S ++ L C
Sbjct: 211 ILSFDIECAGRKGIFPEPQHDPVIQIANMVIKQGSPEPFVRNVFTLDTCAP--------- 261
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I C+V SKE L + + DPDI G++I L +L RA HL + + +
Sbjct: 262 IIGCQVHSFSKESELLEKWADFVREVDPDIFTGYNINNFDLPYLLNRAKHLNVNYFHYLG 321
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R N+ + VV E +L + GR ++ GR+
Sbjct: 322 R-------------------IKNI--KSVVKEQVLQ-----SKQLGRRENKNINTEGRVP 355
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ ++ + KL YT+ AV+ L + + V+T +G + R R Y +
Sbjct: 356 FDLLLVLVRDYKLRSYTLNAVSYHFLLEQKEDVHHSVITD-LQNGNPQTRRRLAVYCLKD 414
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L ++ +L I E+ARV G+ +L+RG Q +V S LLR A ++++ +
Sbjct: 415 AYLPLRLLEKLMCIINYMEMARVTGVPLSCLLTRGQQIKVVSQLLRKAREKDFVIPT--- 471
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ V Q V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+ + L S ++
Sbjct: 472 YSVGVQEEQYEGATVIEPKRGYYADPIATLDFSSLYPSIMMAHNLCYTSLLQG---SVKD 528
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
LG++ D+ P G +V VRKG+LP +LE +L+ R K +K
Sbjct: 529 KLGLTP------------DQYTKTPAGNFFVKTSVRKGLLPEILENLLAARKKAKADLKD 576
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 577 --ETDPLRRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIEQTKQ 633
Query: 1436 FVNENE------KWKAKVIYGDTDRYTV 1457
V A VIYGDTD V
Sbjct: 634 EVERKYCIANGFYHDAVVIYGDTDSVMV 661
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 35/164 (21%)
Query: 36 LQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADI-------PVQ-------- 80
+ G +V VP++R+YG T G C H+H PYL+V D P +
Sbjct: 8 MPGHQVGPVPIMRMYGITMEGHSVCCHVHGFTPYLFVTVPDTFQEKHCEPFKKALNKALL 67
Query: 81 --LRQEDDGYMHAISLALEKALK--VKGSAGSKR---------QHVHECSLVRAKKGGAV 127
+R D A +LA+E LK + G G K+ H + R + +
Sbjct: 68 DDMRYGKDKPSEA-ALAVELQLKENIYGYRGGKKVPFLKITVALHRFVAASKRLLEREVI 126
Query: 128 FDK----SLQPHESHIPFLLQFLVDYNLYGMGHLHL--SKLKFR 165
F + + Q ES+I F ++F+VD + G + L K K R
Sbjct: 127 FPELGAYNYQAFESNIDFDIRFMVDTGVVGCSWVELLPGKWKIR 170
>gi|324120720|dbj|BAJ78751.1| DNA polymerase delta catalytic subunit [Euborellia plebeja]
Length = 1078
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 238/508 (46%), Gaps = 64/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+P +D + +A + A I +L + I
Sbjct: 289 FRILSFDIECAGRKGIFPEPEHDPVIQIASVVQEQGQRAPFIKNVLTLNT------CAPI 342
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
D +VF E L + K + DPDI+ G++I + +L RA HL + + +SR
Sbjct: 343 LDAQVFSFKSESELLDQWAKFVRQVDPDIITGYNINNFDMPYLLNRAKHLKVKNFSYLSR 402
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
N+ + VV +L + G+ +++ GR+
Sbjct: 403 I-------------------KNICS--VVKSKMLQ-----SKQMGQRENKFVNLEGRVAF 436
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
+++ ++ E KL YT+ AV+ L+ + + ++++ +G + R R Y + A
Sbjct: 437 DMYLVLIREHKLRSYTLNAVSFHFLQEQKEDVHHSIISE-LQNGNEQTRRRLAIYCLKDA 495
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L + ++++L E++RV G+ S+L+RG Q +V S LLR A + +L S H
Sbjct: 496 ILPMRLLDKLMAFINYMEMSRVTGVSLASLLTRGQQVKVVSQLLRHAKPRGFLMPS---H 552
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP-SKEN 1315
A Q V+EP G+YA P+ LDF SLYPS+M+A+NLC+ T ++P +K N
Sbjct: 553 TSAGQDEQFEGATVIEPRRGYYAKPIATLDFSSLYPSIMMAHNLCYTT----LVPVAKRN 608
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ +P D++ P +V VRKG+LP +LE +L+ R K +KK
Sbjct: 609 IV-----QP---------DQITQTPANNFFVKSTVRKGLLPEILESLLAARKQAKADLKK 654
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ ++ + RQLALK+ AN YG+T A GR+PC E++ S+ GR +E+
Sbjct: 655 --ETDPFRKQVLDGRQLALKISANSVYGFTGAQV-GRLPCLEISSSVTAYGRQMIERTKQ 711
Query: 1436 FVNENEKWK------AKVIYGDTDRYTV 1457
V + VIYGDTD V
Sbjct: 712 EVEAKYNIANGYPHDSMVIYGDTDSVMV 739
Score = 46.2 bits (108), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
+++ D IF V + IDHY+ +++ G + VPV+R+YG T G C H
Sbjct: 71 NNKTDEIIFQV--IDIDHYIGS-------AQANMPGAQSGPVPVMRIYGVTQNGNSICCH 121
Query: 63 IHRALPYLYV 72
H PY YV
Sbjct: 122 THGYSPYFYV 131
>gi|357613119|gb|EHJ68324.1| DNA polymerase delta catalytic subunit [Danaus plexippus]
Length = 974
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 244/513 (47%), Gaps = 76/513 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R + P+P++D + +A V+ +SE + R++ +
Sbjct: 183 ILSFDIECAGRKGVFPEPKHDPVIQIASM------------VIRQGESEPYLRNVFTLNT 230
Query: 1019 C------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
C +VF E + S + D DI+ G++I +L RA HL + +
Sbjct: 231 CAPIVGSQVFSFQSEAEMLSKWSDFFRELDADIITGYNICNFDWPYLINRAKHLKVDCFD 290
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLHVG 1131
+ R N+ + + KD I++ + GR ++
Sbjct: 291 FLGRI-------------------KNIRS--------VIKDTILQSKQMGRRENKSINFE 323
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ ++ ++ + KL YT+ AV+ L+ + + +++ + + R R Y
Sbjct: 324 GRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIISD-LQNENEQTRRRLAMY 382
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L L+++N+L I E+ARV G+ +L+RG Q +V S LLR + YL
Sbjct: 383 CLKDAYLPLKLLNKLMCIINYIEMARVTGVPLLCLLTRGQQIKVVSQLLRKSKGAGYLM- 441
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P H S+ E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+ T + P
Sbjct: 442 -PAYHSQGSEDQFEG-ATVIEPKKGYYADPISTLDFASLYPSIMMAHNLCYTTL---VPP 496
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ + + ++S D++ + P+ M+V RKG+LP +LE +L+ R K+
Sbjct: 497 NIQKEINLNS------------DDVTVTPSNNMFVKAHKRKGLLPEILESLLAAR---KK 541
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A L + L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +
Sbjct: 542 AKADLKEEKDPLKRSVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMI 600
Query: 1431 EKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
E + V + K A VIYGDTD V
Sbjct: 601 EFTRAEVEKKYTKSNGYKEDAVVIYGDTDSVMV 633
>gi|332687549|emb|CBZ41215.1| catalytic subunit of DNA polymerase delta [Saccharomyces uvarum]
gi|332687551|emb|CBZ41216.1| catalytic subunit of DNA polymerase delta [Saccharomyces uvarum]
gi|332687553|emb|CBZ41217.1| catalytic subunit of DNA polymerase delta [Saccharomyces bayanus]
Length = 1097
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 241/512 (47%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV++A ++ L C
Sbjct: 315 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP-FIRNVFTLNTCSP------ 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + SH+ + DPD+++G++ + +L RA L +
Sbjct: 368 ---ITGSMIFSHATEEEMLSHWRDFIIKADPDVIIGYNTSNFDIPYLLNRAKALKV---- 420
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
++ G N+ E + ES+ + A +G +++ G
Sbjct: 421 ---------------TDFPYFGRLKNVKQE--IKESVFSSKA-----YGTRETKNVNIDG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 459 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++ +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 518 LKDAYLPLRLLEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 575
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 576 PNMQSQASDDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNK---- 630
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
T+ +F+ L ++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 631 --GTVERLNFK--------LDEDYVITPNGDYFVTTKRRRGILPIILDELISAR---KRA 677
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 678 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 736
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 737 KTKNAVQEKYCIKNGYKHDAVVVYGDTDSVMV 768
>gi|324120762|dbj|BAJ78772.1| DNA polymerase delta catalytic subunit [Papilio polytes]
Length = 1082
Score = 188 bits (477), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 243/516 (47%), Gaps = 80/516 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+P +D + +A V+ ++E + R++ +
Sbjct: 291 FRILSFDIECAGRKGIFPEPNHDPVIQIASM------------VVRQGETEPYLRNVFTL 338
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C V S+ E + + + DPDI+ G++I +L RA HL +
Sbjct: 339 NTCAPIVGSQVLSFQSESEMLARWADFFRELDPDIITGYNISNFDWPYLINRAKHLKVDK 398
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLH 1129
+ + R R I + KD++++ + GR ++
Sbjct: 399 FDFLGRI---------------RNIRS------------VIKDSVLQSKQMGRRENKSIN 431
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
GR+ ++ ++ + KL YT+ AV+ L+ + + +++ + + R R
Sbjct: 432 FEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIISD-LQNENEQTRRRLA 490
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L L+++N+L I + E+ARV G+ + +RG Q +V S LLR A YL
Sbjct: 491 MYCLKDAYLPLKLLNKLMCIINSMEMARVTGVPLVCLQTRGQQIKVVSQLLRKAKEAGYL 550
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
P H S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+ T +
Sbjct: 551 I--PAYHGQGSDDQFEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTT----L 603
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
+P P++ +DL D++ I P M+V +RKG+LP +LE +L+ R
Sbjct: 604 VP------------PNMQ--KDLNSDDITITPTKNMFVKSNIRKGLLPEILESLLAAR-- 647
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A L + R + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 648 -KKAKADLKDEKDPFKRSVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGR 705
Query: 1428 STLEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+ +E S V + K A VIYGDTD V
Sbjct: 706 TMIEFTKSEVEKKYTKSNGYKEDAVVIYGDTDSVMV 741
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 40/185 (21%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P+ +I + + IDHY P+ G + G ++ VP++R+YG T G C H+H
Sbjct: 70 PNKDIIVFQQLEIDHYNGQPLAG-------MPGSQLGPVPIMRMYGVTMEGNSVCCHVHG 122
Query: 66 ALPYLYVP---------CADIPVQLRQ---------EDDGYMHAISLALEKALKVKGSAG 107
PY YV C D+ + L + +D+ + + L +A + G
Sbjct: 123 FTPYFYVTVPSNFTDSMCNDMKINLNKVILEDLRSNKDNIRETVLEVRLMQARSIMYYKG 182
Query: 108 S-----KRQHVHECSLVRAKKGGAVFDKS------LQP--HESHIPFLLQFLVDYNLYGM 154
R V L+ A K + DK L P +E++I F ++F+VD N+ G
Sbjct: 183 DVDIRFARVSVALPRLIAAAK--RLIDKQPPSFGLLDPSFYETNIDFDIRFMVDTNVVGC 240
Query: 155 GHLHL 159
+ L
Sbjct: 241 SWIEL 245
>gi|207347015|gb|EDZ73334.1| YDL102Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1097
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 238/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV++A ++ L C
Sbjct: 315 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP-FIRNVFTLNTCSP------ 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + S++ + DPD+++G++ + +L RA L + N
Sbjct: 368 ---ITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKV---N 421
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D P ++ EI E S+ + A +G +++ G
Sbjct: 422 DF---PYFGRLKTVKQEIKE---------------SVFSSKA-----YGTRETKNVNIDG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 459 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 518 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 575
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 576 PNMQSQASGDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVE 634
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ N + ++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 635 RLNL--------------KIDEDYVITPNGDYFVTTKRRRGILPIILDELISAR---KRA 677
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 678 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 736
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 737 KTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMV 768
>gi|324120700|dbj|BAJ78741.1| DNA polymerase delta catalytic subunit [Ephemera japonica]
Length = 1006
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 237/505 (46%), Gaps = 69/505 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSLVG 1015
+LS +++ R + P+P++D I + + S + ++ LL C +VG
Sbjct: 211 ILSFDIECAGRKGIFPEPQHDPVIQIANVVINQGSTEPIIKNVFTLLDCAP------IVG 264
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
+V E L ++ + DPDI+ G++I L ++ RA H+ + +
Sbjct: 265 T---QVLSNQTESALLENWANFVREVDPDIITGYNINNFDLYYMLSRAKHINARNFDFLG 321
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R K A DS I + + GR ++ GR++
Sbjct: 322 RIK-NIKTVAKDSMIQSK-------------------------QMGRRENKKFNMEGRVI 355
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ ++ + KL YT+ AV+ L + + ++T +G + R R Y V
Sbjct: 356 FDLLLVLLRDYKLRSYTLNAVSFHFLGEQKEDVHHSIITD-LQNGDDQTRRRLAVYCVKD 414
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L+++ +L I E+ARV G+ +L+RG Q +V S LLR A +++ + P
Sbjct: 415 AYLPLKLLEKLMCIINYMEMARVTGVSLLCLLTRGQQIKVISQLLRKAKEKDF--VIPTY 472
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
S V+EP+ G+Y P+V LDF SLYPS+M+A+NLC+ T L ++
Sbjct: 473 SVKGSNDEQYEGATVIEPKKGYYKQPIVTLDFSSLYPSIMMAHNLCYTT-----LVQNKD 527
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
L +SS ++ I PNG +V +RKG+LP +LE +LS R K+ +KK
Sbjct: 528 RLKLSS------------EQYTITPNGDCFVKTSIRKGLLPEILESLLSARKKAKEDLKK 575
Query: 1376 -LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
+ P +Q ++ + RQLALK+ AN YG+T A G++PC ++ S GR+ +E
Sbjct: 576 EMDPLRQ---KVLDGRQLALKISANSVYGFTGAQV-GKLPCLAISGSTTAYGRTMIEHTK 631
Query: 1435 SFVNENEKWK------AKVIYGDTD 1453
+ V + + VIYGDTD
Sbjct: 632 TEVEQKFNMANGYAHDSVVIYGDTD 656
>gi|47219672|emb|CAG02717.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1008
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 239/510 (46%), Gaps = 67/510 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + + I + +S + S+VG
Sbjct: 217 LRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFTLQSCA---SIVG- 272
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ ++E L + + L + DPDI+ G++IQ +L RAA L + L
Sbjct: 273 --SQILCFTQENKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVQLF----- 325
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P ++ + S + + + GR +++ GR+
Sbjct: 326 -PYLGRVRSSKSVLRDLNFQSKQM--------------------GRRENKTINMEGRVQF 364
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y + A
Sbjct: 365 DLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLKDA 423
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AISP 1253
L L ++ +L + E+ARV G+ +LSRG Q +V S LLR A Q+ + +
Sbjct: 424 YLPLRLLQKLMCVINYMEMARVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTE 483
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
G V+EPE G+Y+ P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 484 GGEDYTG-------ATVIEPEKGYYSIPIATLDFSSLYPSIMMAHNLCYTTLLQK---GA 533
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
++ +S +++ + P G ++V VRKG+LP +LE +LS R K +
Sbjct: 534 QDKYSLS------------REDFIKTPTGDLFVKSSVRKGLLPEILENLLSARKRAKAEL 581
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E+
Sbjct: 582 KK--ETDPFKRQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIEQT 638
Query: 1434 ISFV------NENEKWKAKVIYGDTDRYTV 1457
V + + AKVIYGDTD V
Sbjct: 639 KQLVESKYTISNGYQADAKVIYGDTDSVMV 668
>gi|259090299|pdb|3IAY|A Chain A, Ternary Complex Of Dna Polymerase Delta
Length = 919
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 238/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV++A ++ L C
Sbjct: 249 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP-FIRNVFTLNTCSP------ 301
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + S++ + DPD+++G++ + +L RA L + N
Sbjct: 302 ---ITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKV---N 355
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D P ++ EI E S+ + A +G +++ G
Sbjct: 356 DF---PYFGRLKTVKQEIKE---------------SVFSSKA-----YGTRETKNVNIDG 392
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 393 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 451
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 452 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 509
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 510 PNMQSQASDDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVE 568
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ N + ++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 569 RLNL--------------KIDEDYVITPNGDYFVTTKRRRGILPIILDELISAR---KRA 611
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 612 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 670
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 671 KTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMV 702
>gi|3480|emb|CAA33504.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 1093
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 148/512 (28%), Positives = 240/512 (46%), Gaps = 72/512 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV LA N S +V+ Y + S
Sbjct: 315 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVYLALRNHS------FVMCYSDTCS---- 364
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + S++ + DPD+++G++ + +L RA L + N
Sbjct: 365 --PITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKV---N 419
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D P ++ EI E S+ + A +G +++ G
Sbjct: 420 DF---PYFGRLKTVKQEIKE---------------SVFSSKA-----YGTRETKNVNIDG 456
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 457 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 515
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 516 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 573
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 574 PNMQSQASDDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNK---- 628
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ R +L + DE + G +V K R+G+LP +L+E++S R K+A
Sbjct: 629 ------ATVERLNLKI-----DEDYVIHYGDYFVTTKRRRGILPIILDELISAR---KRA 674
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 675 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 733
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 734 KTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMV 765
>gi|256087234|ref|XP_002579779.1| DNA polymerase delta catalytic subunit [Schistosoma mansoni]
Length = 1182
Score = 187 bits (475), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 238/515 (46%), Gaps = 72/515 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI--YVLLYCKSESHQRSLV 1014
L +LS +++ SR + P P D D ++I V+ Y ++ R++
Sbjct: 367 LRILSFDIECASRKGVFPVP--------------DKDPVIQIANMVINYGETTPFIRNVF 412
Query: 1015 GIPDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI 1068
+ C V S+ E L + + + DPDI+ G++IQ L +L RA L +
Sbjct: 413 TLNTCAPIVGSQVISHQTEKELLAKWSAFVREVDPDIITGYNIQNFDLPYLINRANTLKV 472
Query: 1069 GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGL 1128
+ R RG A S + + + GR +
Sbjct: 473 DGFEFLGRI---------------RG-----------ARSTIREAMTQSKQMGRRENKFV 506
Query: 1129 HVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRC 1188
++ GR+ ++ +++ + KL YT+ AV+ L + + V+T +G + R R
Sbjct: 507 NIDGRVQFDLLQILFRDYKLRSYTLNAVSYHFLEEQKEDVHHNVITD-LQNGDAQTRRRL 565
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
Y + A L L ++++L I E+ARV G+ +L+RG Q +V S LLR AH Y
Sbjct: 566 AVYCLKDAYLPLRLLDKLMCIVNNIEMARVTGVPLTYLLTRGQQVKVVSQLLRKAHEHGY 625
Query: 1249 LAISPGNHQVASQPAMECL-PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
L + SQ E + V+EP GFY +P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 626 LLPT-----YQSQQGDEFVGATVLEPRKGFYNEPIATLDFASLYPSIMMAHNLCYTTLLQ 680
Query: 1308 -KILPSKENTLGVSSFRPDLHVLR-DLKDELLIP-PNGVMYVPPKVRKGVLPRLLEEILS 1364
P G+ + V R +L DE I P G +V + G+LP +L+++LS
Sbjct: 681 VNTTPHGSTGGGIQAL-----VQRYNLTDEDYIKTPTGAYFVKSHICHGILPEILQQLLS 735
Query: 1365 TRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
R K + K + + R+ + RQLALK+ AN YG+T A G++PC E++ S+
Sbjct: 736 ARKKAKAELAK--ETDPLRKRVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISASVTS 792
Query: 1425 CGRSTLEKAISFVNEN------EKWKAKVIYGDTD 1453
GR +E+ V + K A VIYGDTD
Sbjct: 793 FGRLMIEQTKLHVEKKFTIANGYKHDAVVIYGDTD 827
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P+ + + + + HY +PG + G + VP+IR++G T G C H+H
Sbjct: 108 PNKDGITFQQFDVSHYKGEHLPG-------MPGATQSPVPIIRLFGITEKGHSVCAHVHG 160
Query: 66 ALPYLYVP 73
LPY YVP
Sbjct: 161 FLPYFYVP 168
>gi|350645608|emb|CCD59733.1| DNA polymerase delta catalytic subunit,putative [Schistosoma mansoni]
Length = 1177
Score = 187 bits (475), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 238/515 (46%), Gaps = 72/515 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEI--YVLLYCKSESHQRSLV 1014
L +LS +++ SR + P P D D ++I V+ Y ++ R++
Sbjct: 367 LRILSFDIECASRKGVFPVP--------------DKDPVIQIANMVINYGETTPFIRNVF 412
Query: 1015 GIPDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI 1068
+ C V S+ E L + + + DPDI+ G++IQ L +L RA L +
Sbjct: 413 TLNTCAPIVGSQVISHQTEKELLAKWSAFVREVDPDIITGYNIQNFDLPYLINRANTLKV 472
Query: 1069 GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGL 1128
+ R RG A S + + + GR +
Sbjct: 473 DGFEFLGRI---------------RG-----------ARSTIREAMTQSKQMGRRENKFV 506
Query: 1129 HVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRC 1188
++ GR+ ++ +++ + KL YT+ AV+ L + + V+T +G + R R
Sbjct: 507 NIDGRVQFDLLQILFRDYKLRSYTLNAVSYHFLEEQKEDVHHNVITD-LQNGDAQTRRRL 565
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
Y + A L L ++++L I E+ARV G+ +L+RG Q +V S LLR AH Y
Sbjct: 566 AVYCLKDAYLPLRLLDKLMCIVNNIEMARVTGVPLTYLLTRGQQVKVVSQLLRKAHEHGY 625
Query: 1249 LAISPGNHQVASQPAMECL-PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
L + SQ E + V+EP GFY +P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 626 LLPT-----YQSQQGDEFVGATVLEPRKGFYNEPIATLDFASLYPSIMMAHNLCYTTLLQ 680
Query: 1308 -KILPSKENTLGVSSFRPDLHVLR-DLKDELLIP-PNGVMYVPPKVRKGVLPRLLEEILS 1364
P G+ + V R +L DE I P G +V + G+LP +L+++LS
Sbjct: 681 VNTTPHGSTGGGIQAL-----VQRYNLTDEDYIKTPTGAYFVKSHICHGILPEILQQLLS 735
Query: 1365 TRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
R K + K + + R+ + RQLALK+ AN YG+T A G++PC E++ S+
Sbjct: 736 ARKKAKAELAK--ETDPLRKRVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISASVTS 792
Query: 1425 CGRSTLEKAISFVNEN------EKWKAKVIYGDTD 1453
GR +E+ V + K A VIYGDTD
Sbjct: 793 FGRLMIEQTKLHVEKKFTIANGYKHDAVVIYGDTD 827
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P+ + + + + HY +PG + G + VP+IR++G T G C H+H
Sbjct: 108 PNKDGITFQQFDVSHYKGEHLPG-------MPGATQSPVPIIRLFGITEKGHSVCAHVHG 160
Query: 66 ALPYLYVP 73
LPY YVP
Sbjct: 161 FLPYFYVP 168
>gi|324120698|dbj|BAJ78740.1| DNA polymerase delta catalytic subunit [Mnais pruinosa pruinosa]
Length = 1095
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 234/512 (45%), Gaps = 70/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
+LS +++ R + P+P D + +A + + +D + ++ L C
Sbjct: 300 FRILSYDIECAGRKGIFPEPNQDPVIQIANMVVRQGQTDAFIRNVFTLNTCAP------- 352
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I C+V E + + + DPDI G++I L +L RA HL N
Sbjct: 353 --IIGCQVLSYKDEREMLEKWADFVREVDPDIFTGYNINNFDLPYLLNRAKHLNAKNFNF 410
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R I D +S++ + + + GR ++ GR
Sbjct: 411 LGR------------------IKD--------IKSIIKEQIMQNKQMGRRENKSVNTEGR 444
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 445 VPFDLLMVLLREYKLRSYTLNAVSYHFLGEQKEDVQHSIITD-LQNGNSQTRRRLAVYCL 503
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--AI 1251
A L L ++ +L I E+ARV G+ +L+RG Q +V S LLR A ++++
Sbjct: 504 KDAYLPLRLLEKLMCIINYMEMARVTGVPLSCLLTRGQQIKVVSQLLRKAKEKDFVIPTY 563
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
S G + A V+EP G+Y+DP+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 564 SGGGQDEQFEGAT-----VIEPLRGYYSDPIATLDFSSLYPSIMMAHNLCYTTLLQ---P 615
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ LG+S ++ + P G +V VRKG+LP +LE +LS R K
Sbjct: 616 GSKEKLGLSP------------EDYVQTPAGNYFVRQSVRKGLLPEILENLLSARKKAKD 663
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K+ + + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E
Sbjct: 664 DLKE--ETDPLRRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAFGRTMIE 720
Query: 1432 KAISFVN------ENEKWKAKVIYGDTDRYTV 1457
+ V A VIYGDTD V
Sbjct: 721 QTKQEVETKYCVARGYSHDAVVIYGDTDSVMV 752
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 40/191 (20%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + IDHY P G + G ++ VP++R+YG T G C H+H
Sbjct: 77 PREDALIFQQIDIDHYSGQPFKG-------MPGAQIGPVPIMRMYGVTMEGHSVCCHVHG 129
Query: 66 ALPYLYVPCAD-----------------IPVQLRQEDDGYMHAISLALEKALK--VKGSA 106
PY +V D I +R D A+ LA+E +K + G
Sbjct: 130 FSPYFFVLLPDSFNEDHCGPFKEALNKAIIADMRGNRDNVTEAV-LAVEIQMKENIFGYR 188
Query: 107 GSKRQHVHECSLV------RAKK-------GGAVFDKSLQPHESHIPFLLQFLVDYNLYG 153
G+K+ H + +L AK+ GA+ Q ES+I F ++F+VD L G
Sbjct: 189 GAKKVHFLKVTLALPKLIPAAKRLLEKEVIYGALGVHPYQAFESNIDFDIRFMVDTGLVG 248
Query: 154 MGHLHLSKLKF 164
+ L K+
Sbjct: 249 CSWVELPADKW 259
>gi|401401420|ref|XP_003881007.1| DNA polymerase, related [Neospora caninum Liverpool]
gi|325115419|emb|CBZ50974.1| DNA polymerase, related [Neospora caninum Liverpool]
Length = 3935
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 175/330 (53%), Gaps = 59/330 (17%)
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
++Y++GR ++ L +++ +++ RT+ELAR++G DFFS L+RGSQ++VES++++ +Y
Sbjct: 2917 LKYLLGRVRITLALIDSTELLPRTAELARLYGCDFFSALTRGSQFKVESVMIQATKRLDY 2976
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG- 1307
L +SP QV QPA C+PLV+EP+SGFY PV+VLDF+SLYPS++IA N+C+ T +G
Sbjct: 2977 LFVSPSQSQVTEQPAPLCIPLVLEPKSGFYWSPVLVLDFRSLYPSIVIANNICYSTAMGS 3036
Query: 1308 -KILPSKE--NTLGVSSFRPDLHVLRDLKD--------EL--LIPPNGVMYVPPKVRKGV 1354
++ P+ + TLGV F + + + EL P G + + G
Sbjct: 3037 VEVDPTVQPVKTLGVMDFHAPPALFQQISGAYYEAASAELRKAAPLRGCQEGDNERQAGR 3096
Query: 1355 LPRLLEEILSTRIMVKQAIK------KLAPS--------------QQILHRIFNARQLA- 1393
+ S+ + QA +L PS Q+L I R +
Sbjct: 3097 VGERGHSQASSDVCTSQAWDADSGGIRLLPSGAMFVSRRVRKGIFPQVLSEILQTRIMVQ 3156
Query: 1394 --------------LKLIANVTYG----------YTAAGFSGRMPCAELADSIVQCGRST 1429
L+L+ YG YTAA F+G MPCA++AD+IVQ R+T
Sbjct: 3157 KAIKKYKGKVDEGLLRLLNYRQYGLKMIANVSYGYTAASFTGHMPCADIADAIVQTARTT 3216
Query: 1430 LEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
L +AI V+ +W +V+YGDTD V +
Sbjct: 3217 LMRAIELVHSTPRWGGRVLYGDTDSLFVLV 3246
Score = 43.5 bits (101), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
G + GR++L WRL++ EVKL ++E V VL + S+P +L + G G R
Sbjct: 2705 GGALSGRLLLECWRLLQSEVKLQQSSLEGVTTEVLGKTFASVPPAILANLWKQGQGALR 2763
>gi|225431691|ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
gi|296088521|emb|CBI37512.3| unnamed protein product [Vitis vinifera]
Length = 1089
Score = 186 bits (473), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 150/511 (29%), Positives = 243/511 (47%), Gaps = 71/511 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R P+P +D + N+V L E D + L C +V
Sbjct: 300 ILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGE-DQPFVRNVMTLKSCSP------IV 352
Query: 1015 GIPDCKVFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
G+ D F +E+ L + FI+ DPDI++G++I L +L ERA+ LGI
Sbjct: 353 GV-DVMSFETEREVLLAWRDFIR---EVDPDIIIGYNICKFDLPYLIERASVLGIAEFPI 408
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R S++ D+ S R ++G + + V GR
Sbjct: 409 LGRIR-NSRVRVKDTTFSSR-------------------------QYGTRESKEVTVEGR 442
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++M+ + KL+ Y++ +V+ L + + +++ +G R R Y +
Sbjct: 443 VQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIISD-LQNGNAETRRRLAVYCL 501
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L ++++L I E+ARV G+ +LSRG +V S LLR A +N + P
Sbjct: 502 KDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VLP 559
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
Q S+ V+E +GFY P+ LDF SLYPS+M+AYNLC+CT + P
Sbjct: 560 NVKQAGSEQGTYEGATVLEANAGFYEKPIATLDFASLYPSIMMAYNLCYCTL---VTPED 616
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
L + P V + P+G ++V ++KG+LP +LEE+L+ R K+A
Sbjct: 617 VRKLNL----PPECVNKT--------PSGEIFVKSSLQKGILPEILEELLAAR---KRAK 661
Query: 1374 KKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
L ++ L + + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 662 ADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEH 720
Query: 1433 AISFVNEN------EKWKAKVIYGDTDRYTV 1457
V E + A+VIYGDTD V
Sbjct: 721 TKKLVEEKFTTLGGYEHNAEVIYGDTDSVMV 751
>gi|195997435|ref|XP_002108586.1| hypothetical protein TRIADDRAFT_18979 [Trichoplax adhaerens]
gi|190589362|gb|EDV29384.1| hypothetical protein TRIADDRAFT_18979 [Trichoplax adhaerens]
Length = 1050
Score = 186 bits (473), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 237/509 (46%), Gaps = 68/509 (13%)
Query: 957 LTLLSIEVQ-AESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVG 1015
L LLS ++ + SRG PDP DS+ +A D+ I + +S ++ +VG
Sbjct: 260 LRLLSFDIMCSTSRGT--PDPDKDSVIQIAAVVIRQGDYEPFIKNIFTTQSSAN---IVG 314
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
C++ SKE + + + DPDI+ G+++ SL +L R+ LGI + +
Sbjct: 315 ---CQLHTFSKEKEMLKAWHEFFLEVDPDIITGYNVVNSSLPYLLNRSKALGIEKFSHLG 371
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R E ++ ++ + +G+ +++ GR+
Sbjct: 372 RITNE--------------------------KTQISSNTFQSRAYGKRENKVMNISGRVQ 405
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ + + KL Y++ AV L+ + + V+ G R+R R Y +
Sbjct: 406 FDLLHALLRDYKLRSYSLNAVTFHFLKEQKELLQPSVIADLL-RGNDRSRRRLAIYCLKN 464
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L ++++++L I E+ARV G+ +L+RG Q +V S LLR A + L P +
Sbjct: 465 ASLPIKLLDKLMCIINYMEMARVTGVPLGCLLTRGQQIKVVSQLLRYAKEEKMLM--PAH 522
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
A + V+EP G+Y P+ LDF SLYPS+M A+NLC+ T L
Sbjct: 523 KAEAGDDYTGAI--VIEPVRGYYDCPIATLDFSSLYPSIMQAHNLCYTTLLQH------- 573
Query: 1316 TLGVSSFRPDLHVLRDLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
H L +L D+ + P+G +V +R G+LP++L+ +LS R K +K
Sbjct: 574 -----------HHLSNLSPDDYIKTPSGNYFVKKNLRAGILPKILQNLLSARKKAKFDLK 622
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +EK+
Sbjct: 623 N--EKDPFKRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEVSQSVTAFGRQMIEKSR 679
Query: 1435 SFVNEN------EKWKAKVIYGDTDRYTV 1457
V E K+ A+VIYGDTD V
Sbjct: 680 QLVEERYTIKNGYKFDAQVIYGDTDSVMV 708
Score = 46.6 bits (109), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
D D+ IF + + +D+Y+ P+PG + G VP+IR++G T H
Sbjct: 24 DVNKDAIIF--QQLDMDYYLGSPVPG-------MPGAATGPVPIIRMFGVTKEQHTVICH 74
Query: 63 IHRALPYLYVPCADIPVQLRQED 85
IH PY YV ++P RQ +
Sbjct: 75 IHGFAPYFYV---EVPPTCRQSE 94
>gi|448099944|ref|XP_004199250.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
gi|359380672|emb|CCE82913.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
Length = 1079
Score = 186 bits (473), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 233/511 (45%), Gaps = 68/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+ DS+ NVV+ E+ ++ + C S
Sbjct: 287 LRVLSFDIECSGRKGIFPEADQDSVIQIANVVSKTGESKP-FVRNVFTVNTCAS------ 339
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I ++F E + H+ + DPDI++G++I L +L +RA LG+
Sbjct: 340 ---IIGSQIFEHETEEEMLMHWRNFIVDVDPDIIIGYNIANFDLPYLIDRAKALGLSDFP 396
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
R P K D+ S R +G +++ G
Sbjct: 397 FFGRLP-SVKQEVKDTVFSSRA-------------------------YGTRENKVVNIDG 430
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ +V+ L + + ++T +G R R Y
Sbjct: 431 RMQLDLLQFIQREYKLRSYTLNSVSAYFLGEQKEDVQHSIITD-LQNGNRETRRRLAVYC 489
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L +M +L + +E+ARV G+ F +L+RG Q +V S L R N +
Sbjct: 490 LKDAYLPSRLMEKLMCLVNYTEMARVTGVPFSYLLARGQQIKVISQLFRKCLEDN--IVI 547
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P + E +V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 548 PNMKSEGTNEDYEG-AIVIEPVRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNK---- 602
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
++ L +D+ + PNG ++ RKG+LP +L+E+L+ R +
Sbjct: 603 -----------QTINALNLKEDDYTLTPNGDYFIRDHKRKGILPTILKELLTARKKARAD 651
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+KK + + N RQLALK+ AN YG+T A G++PC ++ S+ GR +EK
Sbjct: 652 LKK--ETDPFKKDVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGREMIEK 708
Query: 1433 AISFVNENEKWK------AKVIYGDTDRYTV 1457
+ V E+ K ++VIYGDTD V
Sbjct: 709 TKNEVQEHYSIKNGFPFDSQVIYGDTDSVMV 739
>gi|224083478|ref|XP_002307042.1| predicted protein [Populus trichocarpa]
gi|222856491|gb|EEE94038.1| predicted protein [Populus trichocarpa]
Length = 1081
Score = 186 bits (473), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 147/511 (28%), Positives = 244/511 (47%), Gaps = 71/511 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R P+P +D + N+V L E D I L C +V
Sbjct: 292 ILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGE-DQPFVRNIMTLNSCSP------IV 344
Query: 1015 GIPDCKVFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
G+ D F +E+ + + FI+ DPDI++G++I L +L ERAA LGI
Sbjct: 345 GV-DVMSFDTEREVLIAWKEFIR---EVDPDIIIGYNICKFDLPYLIERAATLGISEFPV 400
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R S++ D+ S R ++G + + V GR
Sbjct: 401 LGRIR-NSRVRIKDATFSSR-------------------------QYGTRESKEVTVEGR 434
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++M+ + KL+ Y++ +V+ L + + +++ +G R R Y +
Sbjct: 435 VQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIISD-LQNGNAETRRRLAVYCL 493
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L ++++L +I E+ARV G+ +L+RG +V S LLR A +N + P
Sbjct: 494 KDAYLPQRLLDKLMLIYNYVEMARVTGVPLSFLLARGQSIKVLSQLLRKAKEKNL--VIP 551
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
Q S+ V+EP++GFY P+ LDF SLYPS+M+AYNLC+CT + P
Sbjct: 552 NVKQAGSEQGKYEGATVLEPKAGFYEKPIATLDFASLYPSIMMAYNLCYCTL---VTPE- 607
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
D+ L + + P+G +V ++KG+LP +LEE+L+ R K +
Sbjct: 608 -----------DVRKLNLPPECINKTPSGETFVKSNLQKGILPEILEELLTARKRAKADL 656
Query: 1374 KKLA-PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
K+ P ++ + + RQLALK+ AN YG+T A + ++PC E++ S+ GR +E
Sbjct: 657 KEAKDPFEKA---VLDGRQLALKISANSVYGFTGATVA-QLPCLEISSSVTSYGRQMIEH 712
Query: 1433 AISFVNEN------EKWKAKVIYGDTDRYTV 1457
V + + A+VIYGDTD V
Sbjct: 713 TKKLVEDKFTILGGYEHNAEVIYGDTDSVMV 743
>gi|221505528|gb|EEE31173.1| DNA polymerase zeta catalytic subunit, putative [Toxoplasma gondii
VEG]
Length = 3940
Score = 186 bits (473), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 177/332 (53%), Gaps = 63/332 (18%)
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
++Y++GR ++ L +++ +++ RT+ELAR++G DFFS L+RGSQ++VES++++ +Y
Sbjct: 2873 LKYLLGRVRMTLALIDSTELLPRTAELARLYGCDFFSALTRGSQFKVESVMIQATKRLDY 2932
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG- 1307
L +SP QV QPA C+PLV+EP+SGFY PV+VLDF+SLYPS++IA N+C+ T LG
Sbjct: 2933 LFVSPSQTQVTEQPAPLCIPLVLEPKSGFYWSPVLVLDFRSLYPSIVIANNICYSTALGS 2992
Query: 1308 -KILPSKE--NTLGVSSFRPDLHVLRDLKDELLIPPN-----GVMYVPPKV-----RKG- 1353
+I P+ + TLGV F + R + + + G +P RKG
Sbjct: 2993 VEIDPTVQATKTLGVMDFHCPPALFRQISEAYYRAASVDLRKGAPALPDPAGGAGERKGG 3052
Query: 1354 ----------------------VLPRLLEEILSTRIMVKQAIKK-LAPSQQILHRIFNAR 1390
L + S + V + ++K + P Q+L I R
Sbjct: 3053 RDSGERRGHSQASSFCASQAWDADSGGLRLLPSGAMFVSRRVRKGIFP--QVLSEILQTR 3110
Query: 1391 QLA-------------LKLIANVTYG----------YTAAGFSGRMPCAELADSIVQCGR 1427
+ L+L+ YG YTAA F+G MPCA++AD+IVQ R
Sbjct: 3111 IMVQKAIKKYKVEEGLLRLLNYRQYGLKMIANVSYGYTAASFTGHMPCADIADAIVQTAR 3170
Query: 1428 STLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
+TL +AI V+ +W +V+YGDTD V +
Sbjct: 3171 TTLMRAIELVHSTPRWGGRVLYGDTDSMFVLV 3202
Score = 48.5 bits (114), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 78/224 (34%), Gaps = 43/224 (19%)
Query: 1003 YCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER 1062
+ KS Q D +V E L + I DP +++ WD LGFL R
Sbjct: 2530 FTKSAQQQLPAFLPSDTEVVAVESERALIHYVCLIFSVADPSMVLQWDSGCMGLGFLLRR 2589
Query: 1063 AAHLGIGL-----------------LNDISRTPLESKIAAGDSEI--------------- 1090
A LG G L IS P S +A S
Sbjct: 2590 ARVLGFGAELTTALGRRADPLLLSHLRSISYRP-RSHVATSVSPAPVSQQSFGSVSSSSP 2648
Query: 1091 ---SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA------SGLHVGGRIVLNVWRL 1141
+ + + P + A+ E GR+ G + GR++L WRL
Sbjct: 2649 ALPQAESTSASSWSRPSTTDHREARHPTPR-ESGRSSGVSDVLLQGGMLSGRLLLECWRL 2707
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
++ EVKL ++E VA VL S+P +L + G G R
Sbjct: 2708 LQSEVKLQQSSLEGVATEVLGVTFASVPPAILANLWKQGQGALR 2751
>gi|254567878|ref|XP_002491049.1| Catalytic subunit of DNA polymerase delta [Komagataella pastoris
GS115]
gi|238030846|emb|CAY68769.1| Catalytic subunit of DNA polymerase delta [Komagataella pastoris
GS115]
gi|328352425|emb|CCA38824.1| DNA polymerase delta subunit 1 [Komagataella pastoris CBS 7435]
Length = 1093
Score = 186 bits (473), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 234/512 (45%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P +D + NVV+ E+ + ++ + C
Sbjct: 294 LRILSFDIECAGRKGIFPEPEHDPVIQIANVVSRTGES-TPFVRNVFTVNSCAP------ 346
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG ++F KE L + + DPD+++G++I +L RAA L
Sbjct: 347 IVG---SQIFSFEKEEELLRKWRDFIIKVDPDVIIGYNIANFDFPYLINRAATL------ 397
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ P S++ EI + + +G +++ G
Sbjct: 398 KVQDFPFFSRVKTSKQEIKDSTFSSKA--------------------YGTRENKVVNIDG 437
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ +V+ L + + ++T +G R R Y
Sbjct: 438 RMQLDLLQFIQREYKLRSYTLNSVSSHFLGEQKEDVQHSIITD-LQNGDAETRRRLAVYC 496
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L + +L + +E+ARV G+ F +LSRG Q +V S L R L I
Sbjct: 497 LKDAYLPLRLAEKLMCLVNYTEMARVTGVPFSFLLSRGQQIKVISQLFRKCLE---LDIV 553
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
N + S V++P G+Y PV LDF SLYPS+M+A+NLC+ T L K
Sbjct: 554 IPNMKSDSVNEEYEGATVIDPVRGYYDVPVATLDFASLYPSIMMAHNLCYTTLLNK---- 609
Query: 1313 KENTLGVSSFRPDLHVLRDLKD-ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
P + L +KD + ++ PNG +V +RKG+LP +L+E+L+ R K
Sbjct: 610 -----------PTIDRLGLVKDKDYILTPNGDFFVKEDLRKGILPTILQELLAARKKAKY 658
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K + ++ N RQLALK+ AN YG+T A G++PC ++ S+ GR +E
Sbjct: 659 DLK--TETDPFKKQVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGREMIE 715
Query: 1432 KAISFVNENEKWK------AKVIYGDTDRYTV 1457
V E K A+VIYGDTD V
Sbjct: 716 ATKQAVQERYTIKNGYDHDAQVIYGDTDSVMV 747
>gi|324120706|dbj|BAJ78744.1| DNA polymerase delta catalytic subunit [Aposthonia japonica]
Length = 1088
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 230/510 (45%), Gaps = 72/510 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHA---VEIYVLLYCKSESHQRSLVG 1015
+LS +++ R + P+P D + +A DH ++ L C +VG
Sbjct: 301 ILSFDIECAGRKGIFPEPNQDPVIQIANMVVKQGDHEPFIRNVFTLDTCAP------IVG 354
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
C+V E + + + DPDI G++I +L +RA +L +
Sbjct: 355 ---CQVLSYQSETEMLEKWADFIRELDPDIFTGYNINNFDFPYLIQRAKYLNV------- 404
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
+ G N+ +S++ + + + GR ++ GR+
Sbjct: 405 ------------RNFTYLGRIKNI-------QSVIKEQVLQSKQMGRRENKHVNFEGRVP 445
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ ++ + KL YT+ AV+ L+ + + ++T +G + R R Y +
Sbjct: 446 FDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHNIITD-LQNGNSQTRRRLAVYCLKD 504
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--AISP 1253
A L L ++++L I E+ARV G+ +L+RG Q +V S LLR A + YL S
Sbjct: 505 AYLPLRLLDKLMCIINYMEMARVTGVSLSCLLTRGQQIKVVSQLLRKARDKGYLMPTYSG 564
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
G + + A V+EP G+YADP+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 565 GVQEEQYEGAT-----VIEPLKGYYADPITTLDFSSLYPSIMMAHNLCYTTLLQGGTKDK 619
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
P+ +V P+ +V VRKG+LP +LE +LS R K +
Sbjct: 620 --------LSPEDYVK---------TPSQNFFVKESVRKGLLPEILESLLSARKKAKNDL 662
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
K + + + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 663 KN--ETDPFKKNVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIEQT 719
Query: 1434 ISFVNEN------EKWKAKVIYGDTDRYTV 1457
V + K A VIYGDTD V
Sbjct: 720 KQVVEQKYNTENGYKHNAVVIYGDTDSVMV 749
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 72/186 (38%), Gaps = 40/186 (21%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + IDHY P+ G + G +V VP++R+YG T G C HIH
Sbjct: 79 PSVDTLIFQQIDIDHYTGRPMQG-------MPGAQVGPVPIMRMYGITMEGNSVCAHIHG 131
Query: 66 ALPYLYVPCAD-----------------IPVQLRQEDDGYMHAISLALEKALK-----VK 103
PY +V D I +R DG A+ LA+E K +
Sbjct: 132 FSPYFHVLAPDDFTNSHCQPFKDALNRSILADMRSNRDGVQEAV-LAVELVKKQNIFGYR 190
Query: 104 GSAGSKRQHVHECSLVRAKKGGAVFDK----------SLQPHESHIPFLLQFLVDYNLYG 153
G A S + G + +K + Q E++I F ++F+VD + G
Sbjct: 191 GDALSNFLKITVTLPTLIAPGKRLLEKEVMLPAFSSHTFQAFETNIDFDIRFMVDTQIVG 250
Query: 154 MGHLHL 159
+ L
Sbjct: 251 CSWVEL 256
>gi|324120696|dbj|BAJ78739.1| DNA polymerase delta catalytic subunit [Epiophlebia superstes]
Length = 1007
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 238/516 (46%), Gaps = 78/516 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D I + + S ++ L C +
Sbjct: 208 FRILSYDIECAGRKGIFPEPDHDPVIQIANMVIRQGSTEPFIRNVFTLDTCAP------I 261
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLG------ 1067
VG C+V E L + + DPD+ G++I L +L RA HL
Sbjct: 262 VG---CQVLSFKDERELLEKWADFVREVDPDLFTGYNINNFDLPYLINRAKHLNAKNFYF 318
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
+G + DI +S++ + + + GR
Sbjct: 319 LGRIKDI--------------------------------KSVIKEQIMQNKQMGRRENKS 346
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
++ GR+ ++ ++ E KL YT+ AV+ L+ + + +++ +G + R R
Sbjct: 347 INTEGRVPFDLLMVLLREYKLRSYTLNAVSYHFLQEQKEDVQHSIISD-LQNGNPQTRRR 405
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
Y + A L L ++++L I E+ARV G+ +L+RG Q +V S LLR ++
Sbjct: 406 LAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVPLSCLLTRGQQIKVVSQLLRKGKEKD 465
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
++ + + A Q V+EP G+YADP+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 466 FVIPT---YSGAVQDEQFEGATVIEPLRGYYADPITTLDFSSLYPSIMMAHNLCYTTLLQ 522
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
P + LG+S+ D+ P+G +V VRKG+LP +LE +LS R
Sbjct: 523 ---PGTKEKLGLST------------DQYAKTPSGNFFVRESVRKGLLPEILENLLSARK 567
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K +K+ + + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 568 KAKNELKE--ETDPLRRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGR 624
Query: 1428 STLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+ +E+ A +++ A VIYGDTD V
Sbjct: 625 AMIEQTKQEVEAKYCISKGYTHDAIVIYGDTDSVMV 660
Score = 47.8 bits (112), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 33/161 (20%)
Query: 36 LQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV---------PCADIPVQL----- 81
+ G ++ VP++R+YG T G C H+H PY +V CA V L
Sbjct: 8 MPGSQIGPVPIMRMYGVTMEGHSVCCHVHGFSPYFFVHIPEAFNNDHCAPFKVALNKALI 67
Query: 82 ---RQEDDGYMHAISLALEKALK--VKGSAGSKRQHVHECSLVRAK---KGGAVFDK--- 130
R D A+ LA+E +K + G G + +L K + +K
Sbjct: 68 ADMRGNRDNLSEAV-LAVEIQMKENIFGYRGGNKVPFLRVTLALPKLIPAAKRLLEKEMI 126
Query: 131 --SLQPH-----ESHIPFLLQFLVDYNLYGMGHLHLSKLKF 164
+L PH ES+I F ++F+VD NL G + L K+
Sbjct: 127 YTALGPHPYQAFESNIDFDIRFMVDTNLVGCSWVELPPQKW 167
>gi|444316824|ref|XP_004179069.1| hypothetical protein TBLA_0B07320 [Tetrapisispora blattae CBS 6284]
gi|387512109|emb|CCH59550.1| hypothetical protein TBLA_0B07320 [Tetrapisispora blattae CBS 6284]
Length = 1104
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 234/511 (45%), Gaps = 67/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P YDS+ N+V++ ++ L C
Sbjct: 322 LRILSFDIECAGRVGIFPEPEYDSVIQIANIVSVVGAKKP-FIRNVFTLDTC-------- 372
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I VF E + H+ + DPD+++G++IQ +L +RA L
Sbjct: 373 -APITGSHVFDHKTEAEMLQHWKDFIIEVDPDVMIGYNIQNFDFPYLIDRAKAL------ 425
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
I P S+I+ ++ VV E++ + A G + ++ G
Sbjct: 426 KIEDFPYFSRISN---------------SKQVVKEAVFSSKAT-----GTRESKNTNIDG 465
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++++ ++ E KL YT+ AV+ L + + ++T G R R Y
Sbjct: 466 RLQFDLFQFIQREYKLRSYTLNAVSANFLNEQKEDVHHSIITD-LQLGDSETRRRLAVYC 524
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++++L + +E+ARV G+ F +L+RG Q +V S L R + I
Sbjct: 525 LKDAYLPLRLLDKLMGLVNYTEMARVTGVPFSYLLTRGQQIKVISQLFRKCLEID--TII 582
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P S E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K +
Sbjct: 583 PNITSKGSDEQYEG-ATVIEPIRGYYDIPIATLDFNSLYPSIMMAHNLCYTTLCNKQIV- 640
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
N+L + L ++ +I PNG +V K R G+LP +L +++S R K
Sbjct: 641 --NSLNLK-----------LDEDYIITPNGDYFVTEKRRHGILPIILNDLISARKKAKND 687
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+KK + N RQLALK+ AN YG+T A G++PC ++ S+ GR + +
Sbjct: 688 LKK--EKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTSFGRKMILE 744
Query: 1433 AISFVNENEKWK------AKVIYGDTDRYTV 1457
+ V + K A V+YGDTD V
Sbjct: 745 TKNAVQDKYSVKNGYEHDAVVVYGDTDSVMV 775
>gi|212530840|ref|XP_002145577.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
marneffei ATCC 18224]
gi|210074975|gb|EEA29062.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
marneffei ATCC 18224]
Length = 1105
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 150/517 (29%), Positives = 244/517 (47%), Gaps = 80/517 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P D + NVV + ++VL C S
Sbjct: 308 LRILSFDIECAGRKGIFPEPNQDPVIQIANVVT-RYGESKPFVRNVFVLDTC-------S 359
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
L I + ++F E + + + + + DPD+++G++I +L +RA HL
Sbjct: 360 L--IVNTQIFEFKDEAKMLAAWQQFVQKVDPDVIIGYNIANFDFPYLLDRAKHLKCQSFP 417
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
++R P + K A ++ S + + G + G
Sbjct: 418 YLTRLP-QIKSEAKETNFSSK-------------------------QMGNRDTKSTNTNG 451
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
RI L++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y
Sbjct: 452 RIQLDLLQLVQRDHQLRSYTLNSVCAEFLGEQKEDVHHTIITELFNGTPD-SRRRLAVYC 510
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ-----N 1247
+ A L +M++L + +E+ARV G+ F +LSRG Q + S + R A T+ N
Sbjct: 511 LKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNYLLSRGQQVKFISQIFRKARTEQLVIPN 570
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
G+++ A+ V+EP G+Y PV LDF SLYPS++ A+NLC+ T L
Sbjct: 571 LSKQDDGDYEGAT---------VIEPIRGYYDVPVATLDFASLYPSIIQAHNLCYTTLL- 620
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
N V F ++ +D ++ ++ PNG M+ KVRKG+L ++LEE+L R
Sbjct: 621 -------NKHKVEHF----NLKKD--EDYIVTPNGDMFCTTKVRKGLLSQILEELLGAR- 666
Query: 1368 MVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
K+A K+LA + + + N RQLALK+ AN YG T A G++PC E+A S G
Sbjct: 667 --KRAKKELAVEKDPFKKAVLNGRQLALKVSANSVYGLTGATV-GKLPCLEIASSTTSYG 723
Query: 1427 RSTLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
R +EK A + A+VIYGDTD V
Sbjct: 724 RQMIEKTKAEVEAKYTIANGYSHDAQVIYGDTDSVMV 760
>gi|443899075|dbj|GAC76406.1| ribonucleotide reductase, alpha subunit [Pseudozyma antarctica T-34]
Length = 1160
Score = 186 bits (472), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 240/503 (47%), Gaps = 59/503 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A + + + + SH +VG
Sbjct: 369 LRILSFDIECAGRKGVFPEPSVDPVIQIANMVTRQGESTPFVKNVFTLNTCSH---IVG- 424
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V +KEI + + K + DPD+++G++I +L +RA L + R
Sbjct: 425 --SQVLSFNKEIDMLEAWTKFVQEVDPDVVIGYNIANFDFPYLLDRAKALKSTKFAYLGR 482
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
ERG+ E+ + A +G + + GR+ L
Sbjct: 483 ---------------ERGVRTE------AKETHFSSKA-----YGTRDSKNTELQGRLQL 516
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ + KL Y++ +V+ L + + ++T+ +GP +R R Y + A
Sbjct: 517 DMLQVMQRDYKLRSYSLNSVSFEFLGEQKEDVHHSLITELQNAGP-ESRRRLAVYCLKDA 575
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L E+ARV G+ F +LSRG Q +V S L R A+ NYL P
Sbjct: 576 YLPQRLMDKLMCFINYIEMARVTGVPFNYLLSRGQQIKVVSQLFRKANEDNYLV--PAYK 633
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
++ E V+EP++G+Y P+ LDF SLYPS+M+A+NLC+ T L K T
Sbjct: 634 GEGTEDQYEG-ATVLEPKAGYYDRPIATLDFASLYPSVMMAHNLCYTTLLDK------KT 686
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ + D ++ ++ PN + K+RKG+LP +LE +L+ R K +KK
Sbjct: 687 IDRLDLKQD--------EDYVVTPNNNCFATKKLRKGLLPTVLENLLAARKRAKADLKK- 737
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ + + RQLALK+ AN YG+T A G++PC E++ S GR +++ ++
Sbjct: 738 -ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLEISMSTTAYGRQMIDQTKAY 795
Query: 1437 VNEN------EKWKAKVIYGDTD 1453
V + + A+V+YGDTD
Sbjct: 796 VERHYTIANGYQHDAEVVYGDTD 818
Score = 40.8 bits (94), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 41 VNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
V + P IR+YG T G C H+H LPY Y+
Sbjct: 185 VGQPPAIRMYGVTAQGNSVCAHVHGFLPYFYI 216
>gi|270002921|gb|EEZ99368.1| DNA polymerase delta [Tribolium castaneum]
Length = 1050
Score = 186 bits (472), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 236/511 (46%), Gaps = 67/511 (13%)
Query: 956 QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAV---EIYVLLYCKSESHQRS 1012
+ + S +++ R + P+P D I +A + D V I+ L C H
Sbjct: 253 RFRIHSFDIECAGRKGIFPEPNVDPIIQIANVIKLHGDEDVVTRNIFTLNSCAPIGH--- 309
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+V E + + + + DPDI G++I +L ERA HL + +
Sbjct: 310 ------AEVRSFDTEAEMLEEWAEFVRETDPDIFTGYNINNFDFPYLIERANHLKLKRFD 363
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ R I D + S+ K+ + + + G+ ++ G
Sbjct: 364 YLGR------------------ILD-------IRSSI--KETVTQTKIGKRTFKSINFEG 396
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ +++ + KL YT+ +V++ +L + + + V+T +G + R R Y
Sbjct: 397 RVAYDMLMVIKRDFKLRSYTLNSVSQEILGEQKEDVHYSVITD-LQNGDEQTRRRLAVYC 455
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L + I++ + E+ARV G+ S+L++G Q +V + LL+ A Y +
Sbjct: 456 LKDADLPVRILSTVRSFTNDVEMARVTGVPITSLLTKGEQVKVVAQLLKHARAAGYFMPT 515
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
HQ A V+EP G+Y DP+ LDF SLYPS+MIA+NLC+ T I PS
Sbjct: 516 ---HQGAPSSEQYEGATVIEPRRGYYTDPIATLDFSSLYPSIMIAHNLCYTTL---IKPS 569
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ L +S +++ P M+V VR G+LP +L+ +L+ R K
Sbjct: 570 IKEKLCLSD------------EQVTTTPANCMFVKSSVRPGLLPHILQHLLAARKKTKAE 617
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K+ + ++ + + RQLA K+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 618 LKE--ATDPVVRAVLDGRQLAYKISANSVYGFTGAQV-GKLPCLEISSSVTAYGRTMIEQ 674
Query: 1433 AISFVNENEKWK------AKVIYGDTDRYTV 1457
V ++ + + A VIYGDTD V
Sbjct: 675 TKQEVEQHYRIENGYESDAMVIYGDTDSVMV 705
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
+ D P + + + +DHY++ P PG + G + VPVIR++G T G C
Sbjct: 27 VGDLNPTDDALIFQELELDHYISAPYPG-------MPGAQTGTVPVIRMFGITKVGNSVC 79
Query: 61 LHIHRALPYLYVPCADIPVQLRQED 85
HIH PY Y+ ++P Q D
Sbjct: 80 CHIHGFSPYFYI---NLPNDFTQAD 101
>gi|324120682|dbj|BAJ78732.1| DNA polymerase delta catalytic subunit [Metriocampa sp. 44]
Length = 1115
Score = 186 bits (472), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 235/513 (45%), Gaps = 74/513 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A V+I L E R++ +
Sbjct: 324 LRILSFDIECAGRKGIFPEAEHDPVIQIA--------SMVQIQGQL----EPMIRTVFTL 371
Query: 1017 PDCKVFVCS------KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C V + E+ L + + DPD+L G++I L +L RA HL
Sbjct: 372 DTCAPIVGALVKSFDSEVQLLESWASFVRQVDPDLLTGYNINNFDLPYLLNRARHLHCKH 431
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ + R I + M V ES+L + GR +++
Sbjct: 432 FHYLGR------------------INNTM---SCVRESMLQ-----SKQMGRRENKNINI 465
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ +V+ L + + +++ G + R R
Sbjct: 466 EGRVTFDLLLVLLRDYKLRSYTLNSVSFHFLSEQKEDVHHSIISD-LHYGNAQTRRRLAV 524
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++++L I E+ARV G+ +L+RG Q +V S +LR A Q
Sbjct: 525 YCLKDAYLPLRLLDKLMCIINYMEMARVTGVPLSFLLTRGQQVKVMSQILRKAREQKL-- 582
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
+ P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 583 VVPTYQSRASDEQFEG-ATVIEPNKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLA--- 638
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
P E TLG F + P+G ++V +RKG+LP +LE +L+ R K
Sbjct: 639 PGSEKTLGAEDF--------------VRTPSGNLFVKSTLRKGLLPEILENLLAARKKAK 684
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+ +K ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +
Sbjct: 685 EELKN--EKDPFRCKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISQSVTAFGRTMI 741
Query: 1431 E------KAISFVNENEKWKAKVIYGDTDRYTV 1457
E +A ++ + AKVIYGDTD V
Sbjct: 742 ELTKKEVEARYSTSQGAEQDAKVIYGDTDSVMV 774
Score = 53.9 bits (128), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 78/195 (40%), Gaps = 51/195 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
D PD + + + +D+Y+ P+ G + G +V V ++R++G T AG C H
Sbjct: 92 DLNPDEDFILFQQMDVDNYIGFPMKG-------MPGPQVGNVAIMRLFGVTKAGNSVCCH 144
Query: 63 IHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKAL---------------------- 100
+H PY YV D + G++H L KA+
Sbjct: 145 VHGFTPYFYVTVPD------DFNKGHIHEFKDTLNKAMLADMRSTRESIPEPILSLELMD 198
Query: 101 --KVKGSAGSKRQHVHECSLVRAK---KGGAVFDK-----------SLQPHESHIPFLLQ 144
+ G G++ + ++ + G + +K S +P+E++I F +
Sbjct: 199 RESIFGYHGNQTRKFLCVTVALPRLVASGKRLLEKGDGVPSQFRSHSFKPYEANIDFETR 258
Query: 145 FLVDYNLYGMGHLHL 159
F+VD +L G + L
Sbjct: 259 FMVDMSLVGCSWVRL 273
>gi|388852680|emb|CCF53598.1| probable DNA polymerase delta catalytic subunit [Ustilago hordei]
Length = 1057
Score = 186 bits (472), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 240/508 (47%), Gaps = 69/508 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + + + + + SH +VG
Sbjct: 266 LRILSFDIECAGRKGVFPEASMDPVIQIANMVTRQGESSPFVKNVFTLNTCSH---IVG- 321
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V +KEI + + K + DPD+++G++I +L +RA L + R
Sbjct: 322 --SQVLSFNKEIDMLEAWTKFVQEVDPDVIIGYNIANFDFPYLLDRAKALKSTKFAYLGR 379
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVGGRIV 1135
ERG+ AKD + +G + + GR+
Sbjct: 380 ---------------ERGVRTE------------AKDTHFSSKAYGTRDSKNTELQGRLQ 412
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ ++M+ + KL Y++ +V+ L + + ++T+ +GP +R R Y +
Sbjct: 413 LDMLQVMQRDYKLRSYSLNSVSFEFLGEQKEDVHHSLITELQNAGP-ESRRRLAVYCLKD 471
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L +M++L E+ARV G+ F +LSRG Q +V S L R A+ YL P
Sbjct: 472 AYLPQRLMDKLMCFVNYIEMARVTGVPFNYLLSRGQQIKVVSQLFRKANEDKYLV--PAY 529
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI----LP 1311
++ E V+EP++G+Y P+ LDF SLYPS+M+A+NLC+ T L K L
Sbjct: 530 KGEGTEDQYEG-ATVLEPKAGYYDRPIATLDFASLYPSVMMAHNLCYTTLLDKKTIDRLE 588
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
KEN D+ +I PN + K+RKG+LP +LE +L+ R K
Sbjct: 589 LKEN------------------DDFVITPNNNYFATKKLRKGLLPTVLENLLAARKRAKA 630
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+KK + + + RQLALK+ AN YG+T A G++PC E++ S GR +E
Sbjct: 631 DLKK--ETDPFRRAVLDGRQLALKISANSVYGFTGATI-GKLPCLEISMSTTAYGRQMIE 687
Query: 1432 KAISFVNEN------EKWKAKVIYGDTD 1453
+ ++V ++ + A+V+YGDTD
Sbjct: 688 QTKTYVEKHYTIANGYEHDAEVVYGDTD 715
>gi|189234183|ref|XP_967290.2| PREDICTED: similar to DNA polymerase delta catalytic subunit
[Tribolium castaneum]
Length = 1172
Score = 186 bits (472), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 236/511 (46%), Gaps = 67/511 (13%)
Query: 956 QLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAV---EIYVLLYCKSESHQRS 1012
+ + S +++ R + P+P D I +A + D V I+ L C H
Sbjct: 253 RFRIHSFDIECAGRKGIFPEPNVDPIIQIANVIKLHGDEDVVTRNIFTLNSCAPIGH--- 309
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+V E + + + + DPDI G++I +L ERA HL + +
Sbjct: 310 ------AEVRSFDTEAEMLEEWAEFVRETDPDIFTGYNINNFDFPYLIERANHLKLKRFD 363
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ R I D + S+ K+ + + + G+ ++ G
Sbjct: 364 YLGR------------------ILD-------IRSSI--KETVTQTKIGKRTFKSINFEG 396
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ +++ + KL YT+ +V++ +L + + + V+T +G + R R Y
Sbjct: 397 RVAYDMLMVIKRDFKLRSYTLNSVSQEILGEQKEDVHYSVITD-LQNGDEQTRRRLAVYC 455
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L + I++ + E+ARV G+ S+L++G Q +V + LL+ A Y +
Sbjct: 456 LKDADLPVRILSTVRSFTNDVEMARVTGVPITSLLTKGEQVKVVAQLLKHARAAGYFMPT 515
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
HQ A V+EP G+Y DP+ LDF SLYPS+MIA+NLC+ T I PS
Sbjct: 516 ---HQGAPSSEQYEGATVIEPRRGYYTDPIATLDFSSLYPSIMIAHNLCYTTL---IKPS 569
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ L +S +++ P M+V VR G+LP +L+ +L+ R K
Sbjct: 570 IKEKLCLSD------------EQVTTTPANCMFVKSSVRPGLLPHILQHLLAARKKTKAE 617
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K+ + ++ + + RQLA K+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 618 LKE--ATDPVVRAVLDGRQLAYKISANSVYGFTGAQV-GKLPCLEISSSVTAYGRTMIEQ 674
Query: 1433 AISFVNENEKWK------AKVIYGDTDRYTV 1457
V ++ + + A VIYGDTD V
Sbjct: 675 TKQEVEQHYRIENGYESDAMVIYGDTDSVMV 705
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
+ D P + + + +DHY++ P PG + G + VPVIR++G T G C
Sbjct: 27 VGDLNPTDDALIFQELELDHYISAPYPG-------MPGAQTGTVPVIRMFGITKVGNSVC 79
Query: 61 LHIHRALPYLYVPCADIPVQLRQED 85
HIH PY Y+ ++P Q D
Sbjct: 80 CHIHGFSPYFYI---NLPNDFTQAD 101
>gi|324120764|dbj|BAJ78773.1| DNA polymerase delta catalytic subunit [Stenopsyche marmorata]
Length = 1000
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 235/513 (45%), Gaps = 76/513 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R + P+P+ D + +A V+ +SE R++ +
Sbjct: 209 ILSFDIECAGRRGIFPEPQKDPVIQIANM------------VIRQGESEPFIRNVFTLNT 256
Query: 1019 CKVFVCSKEIHLFSHFIKILCSF-------DPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
C V S + F ++LC + DPDI+ G++I +L +RA HL +
Sbjct: 257 CAPIVGSHVLS-FQTEQEMLCKWSEFIREVDPDIITGYNINNFDFPYLIDRAHHLKVKDF 315
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+SR I D S++ + + GR +++
Sbjct: 316 EFLSR------------------IKD--------IRSVIRNKVLQSKQMGRRENKSMNIE 349
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ ++ ++ + KL YT+ AV+ L+ + + V+T + + R R Y
Sbjct: 350 GRVPFDLLLVLVRDYKLRSYTLNAVSYHFLKEQKEDVHHSVITD-MQNESDQTRRRLAMY 408
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L L ++N+L I E+ARV G+ +L+RG Q +V S LLR A T Y I
Sbjct: 409 CLKDAYLPLRLLNKLMCIINYMEMARVTGVPLACLLNRGQQIKVVSQLLRKAKTSKY--I 466
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P H S E V++P G+Y++P+ LDF SLYPS+M+A+NLC+ T L +
Sbjct: 467 MPAYHSQGSDDQYEG-ATVIDPLKGYYSNPIATLDFASLYPSIMMAHNLCYTTLLPNHMK 525
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
K N D++ P+ M+V VRKG+LP +LE +L R K
Sbjct: 526 EKLNITD---------------DQVTRTPSNNMFVKSTVRKGLLPEILESLLGARKKAKA 570
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K+ + + + RQLALK+ AN YG+T A G++PC E++ S+ GRS +E
Sbjct: 571 DLKE--ETDPFKRSVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISSSVTSYGRSMIE 627
Query: 1432 KAISFVNENEKWKAK-------VIYGDTDRYTV 1457
+ V E KA VIYGDTD V
Sbjct: 628 QTKQEV-EQRYTKANGYDEDAIVIYGDTDSVMV 659
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 48/176 (27%)
Query: 25 PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQLRQE 84
P+PG + G ++ VP++R++G T C H+H PY YV +P ++E
Sbjct: 4 PLPG-------MPGSQIAPVPIMRMFGITMERYSVCCHVHGFTPYFYV---SVPESFKEE 53
Query: 85 DDGYMHAISLALEKAL--KVKGSAGSKRQHVHECSLVRAKK------------------- 123
H + L KA+ ++ + S R+ V + +L +AK
Sbjct: 54 T---CHKLKSTLNKAILNDLRSNKESIREAVLQVTLFQAKSLMNYTGDKENTYARIAVAL 110
Query: 124 ------GGAVFDKS------LQP--HESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
+ +K+ + P +ES+I F ++F+VD + G + L K+R
Sbjct: 111 PRLIAAAKRLIEKTPLEFHLMDPSFYESNIDFDIRFMVDTTVVGCSWIELPAGKWR 166
>gi|324120752|dbj|BAJ78767.1| DNA polymerase delta catalytic subunit [Inocellia japonica]
Length = 1005
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 236/507 (46%), Gaps = 64/507 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
LS +++ + R P P D + +A + D A IY +S + I
Sbjct: 213 FLSFDIECQGRRGYFPTPDIDPVIQIANVVQRYGD-AEPIY-----RSVFTLNTCAPIAY 266
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
+V E L + + + + DPDI+ G++ L +L ERA L + + R
Sbjct: 267 AEVRSFKTESKLLNAWAEFMRDMDPDIVTGYNTNAFDLPYLVERATKLKLDRFKYLGR-- 324
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
+L P V + + ++ G+ + +H+ GR ++
Sbjct: 325 --------------------LLNVPSVVKDRTTQSKLM----GKRQSKYVHLEGRTEYDM 360
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
+ R KL YT+ ++ +L + + + ++ G + R+R Y + A L
Sbjct: 361 LVVARRTCKLRSYTLNNTSQEILGEQKEDVHYSQISG-LQEGNEQTRHRLAVYCLKDAVL 419
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
L ++N L+ ELARV G+ ++++RG Q +V + LL+ YL P +
Sbjct: 420 PLRLLNHLNSFTNDMELARVSGVTITTLMTRGEQIKVVTQLLKQGKQAGYLM--PVHRGA 477
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLG 1318
S E V+EP G+Y DP+ LDF SLYPS+M+A+NLC+ T L P + LG
Sbjct: 478 QSDEQYEG-ATVIEPIRGYYTDPIATLDFSSLYPSIMMAHNLCYTTLLN---PHNKEKLG 533
Query: 1319 VSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA- 1377
++ D++ P +V P +R+G+LP++LE +L+ R K+A K+LA
Sbjct: 534 LTD------------DQITKTPMNNYFVKPSIRRGLLPQILENLLAAR---KRAKKELAE 578
Query: 1378 PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL------- 1430
+ + ++ N RQLALK+ AN YG+T A G++PC E++ S+ GR+ +
Sbjct: 579 ETDPVRQKVLNGRQLALKVSANSVYGFTGAQV-GKLPCLEISGSVTGYGRTMIEYTRQEV 637
Query: 1431 EKAISFVNENEKWKAKVIYGDTDRYTV 1457
E+ + VN E A+VIYGDTD V
Sbjct: 638 EQRYTIVNGYEH-DAQVIYGDTDSVMV 663
>gi|297793989|ref|XP_002864879.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
lyrata subsp. lyrata]
gi|297310714|gb|EFH41138.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
lyrata subsp. lyrata]
Length = 1092
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/512 (29%), Positives = 244/512 (47%), Gaps = 73/512 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R P+ ++D + N+V L E D + L C +V
Sbjct: 305 VLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGE-DHPFVRNVMTLKSCAP------IV 357
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G+ D F +E+ L + ++ DPDI++G++I L +L ERAA LGI +
Sbjct: 358 GV-DVMSFETEREVLL--AWRDLIRDVDPDIIIGYNICKFDLPYLIERAATLGIEEFPLL 414
Query: 1075 SRTPLESKIAAGDSEISER--GITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
R S++ DS S R GI + +K+ IE G
Sbjct: 415 GRVK-NSRVRVRDSTFSSRQQGIRE-------------SKETTIE--------------G 446
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R ++ + + + KL+ Y++ +V+ L + + ++T +G R R Y
Sbjct: 447 RFQFDLIQAIHRDHKLSSYSLNSVSAHFLSEQKEDVHHSIITD-LQNGNAETRRRLAVYC 505
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L ++++L I E+ARV G+ +L+RG +V S LLR A +N +
Sbjct: 506 LKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLARGQSIKVLSQLLRKAKQKNL--VL 563
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P Q S+ V+E +GFY P+ LDF SLYPS+M+AYNLC+CT + P
Sbjct: 564 PNAKQSGSEQGTYEGATVLEARTGFYEKPIATLDFASLYPSIMMAYNLCYCTL---VTPE 620
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
L + P HV R P+G +V ++KG+LP +LEE+L+ R K+A
Sbjct: 621 DVRKLNL----PPEHVTRT--------PSGETFVKQSLQKGILPEILEELLTAR---KRA 665
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
L ++ L + + + RQLALK+ AN YG+T A +G++PC E++ S+ GR +E
Sbjct: 666 KADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGAT-NGQLPCLEISSSVTSYGRQMIE 724
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+ V + ++ A+VIYGDTD V
Sbjct: 725 QTKKLVEDKFTTLGGYEYNAEVIYGDTDSVMV 756
>gi|401626408|gb|EJS44355.1| cdc2p [Saccharomyces arboricola H-6]
Length = 1097
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 239/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++S +++ R + P+P YD + NVV++A ++ L C
Sbjct: 315 LRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP-FIRNVFTLNTCSP------ 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F + E + S + + DPD+++G++ + +L RA L + N
Sbjct: 368 ---ITGSMIFSHATEEEMLSKWRDFIIKADPDVIIGYNTTNFDIPYLLNRAKALKV---N 421
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D P ++ EI E S+ + A +G +++ G
Sbjct: 422 DF---PYFGRLKNVKQEIKE---------------SVFSSKA-----YGTRETKNVNIDG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + +++ +G R R Y
Sbjct: 459 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISD-LQNGDSETRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 518 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCLEID--TVI 575
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 576 PNMQSQASDDQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNK---- 630
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
T+ F+ D ++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 631 --GTVERLDFKLD--------EDYVITPNGDFFVTAKRRRGILPIILDELISAR---KRA 677
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 678 KKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRTMIL 736
Query: 1432 KAISFVNENEKWK------AKVIYGDTDRYTV 1457
K + V E K A V+YGDTD V
Sbjct: 737 KTKNAVQEKYCIKNGYTHDAVVVYGDTDSVMV 768
>gi|324120708|dbj|BAJ78745.1| DNA polymerase delta catalytic subunit [Galloisiana yuasai]
Length = 994
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 239/513 (46%), Gaps = 76/513 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R + P+ +D + +A D E R++ +
Sbjct: 205 ILSFDIECAGRKGIFPEANHDPVIQIANMVVRQGDR------------EPFIRNVFTLDT 252
Query: 1019 C------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
C +V +E + + + DPDI G++I +L +R+ HL +
Sbjct: 253 CAPIVGSQVLSYKRESAMLKDWANFVREVDPDIFTGYNINNFDFPYLIDRSNHLKV---- 308
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ G N+ S++ + + G+ +++ G
Sbjct: 309 ---------------QDFCFLGRVKNI-------RSVIKNQVLQSKQMGKRENKSVNIEG 346
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ +++ ++ + KL YT+ AV+ L+ + + ++T +G + R R Y
Sbjct: 347 RVPFDLFAVLIRDYKLRSYTLNAVSFHFLQEQKEDVQHNIITD-LQNGTPQTRRRLAVYC 405
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++++L I E+ARV G+ +L+RG Q +V S LLR A + YL +
Sbjct: 406 LKDAYLPLRLLDKLMCIINYMEMARVTGVSLSCLLTRGQQIKVVSQLLRKAKEKGYLIPT 465
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP- 1311
H Q V+EP+ G+Y DP+ LDF SLYPS+M+A+NLC+ T +LP
Sbjct: 466 ---HNGGVQEDQYEGATVIEPKRGYYGDPIATLDFSSLYPSIMMAHNLCYTT----LLPV 518
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
S ++ LG++ +D+ P+ ++V VRKG+LP +LE +LS R K
Sbjct: 519 SVKDKLGLT------------QDQFTKTPSNNLFVKSSVRKGLLPEILESLLSARKKAKN 566
Query: 1372 AIK-KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+K + P +Q ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +
Sbjct: 567 DLKNETNPFKQ---KVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMI 622
Query: 1431 EKAISFVNENE------KWKAKVIYGDTDRYTV 1457
E+ V + K+ A VIYGDTD V
Sbjct: 623 EQTKQEVEDRYKIANGFKYDAMVIYGDTDSVMV 655
Score = 47.8 bits (112), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 33/162 (20%)
Query: 36 LQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCAD-------IPVQ-------- 80
+ G +V VPV+R+YG T G C H+H PY +V + +P Q
Sbjct: 8 MPGAQVGPVPVMRMYGVTMEGNSVCCHVHGFSPYFFVSAPENFTDKHCLPFQKALNSSMI 67
Query: 81 --LRQEDDGYMHAISLALEKALK--VKGSAGSKRQHVHECSLVR------AKK------- 123
LR +G A+ LA+E ++ V G G + + ++ AK+
Sbjct: 68 ADLRSNREGIQDAV-LAVETVMRQSVFGYRGEDKTTFLKITVTLPRLIAPAKRLLEKTCV 126
Query: 124 GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
A+ + Q +ES+I F ++F+ D L G + L K++
Sbjct: 127 YSALGNHDYQAYESNIDFDIRFMTDTGLVGCSWVELPPGKWK 168
>gi|307167251|gb|EFN60939.1| DNA polymerase delta catalytic subunit [Camponotus floridanus]
Length = 1092
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 244/510 (47%), Gaps = 66/510 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
+LS +++ R + P+ ++D + +A + + +S+ ++ I+ L C +
Sbjct: 298 FRILSFDIECAGREGIFPEAKHDPVIQIANMVIKQGESEPFLKNIFTLNTCAP------I 351
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V KE + + + DPDI G++I +L RA HL + N
Sbjct: 352 VG---CQVLSFDKENLMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRAQHLNVKNFNF 408
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R I S I +R + L GR ++ GR
Sbjct: 409 LGR------IKNIKSVIKDRVLQSKQL--------------------GRRENKSINFEGR 442
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ + KL Y++ AV+ L+ + + ++ +T +G + R R Y +
Sbjct: 443 VPFDLLLVLVRDYKLRSYSLNAVSYHFLQEQKEDVHYKDITS-LQNGNSQTRRRLAVYCL 501
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR ++YL I
Sbjct: 502 KDAYLPLRLLDKLMCIIIYMEMARVTGVSISSLLTRGQQIKVVSQLLRKTREKDYL-IPV 560
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
QV + V+EP+ G+Y P+ LDF SLYPS+++A+NLC+ T L +K
Sbjct: 561 HQGQVVDEQFEGA--TVIEPKRGYYNSPIATLDFSSLYPSIIMAHNLCYTTLLTL---AK 615
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+ L + +D++ + P+ +++ VRKG+LP +LE +L+ R K +
Sbjct: 616 KRELNIQ------------EDQVTVTPSNSLFIKSTVRKGILPEILENLLAARKKAKAEL 663
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
K+ + + ++ + RQ ALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 664 KQ--ETDPLKQKVLDGRQYALKVSANSVYGFTGAQM-GKLPCLEISASVTAYGRTMIEQT 720
Query: 1434 IS-----FVNEN-EKWKAKVIYGDTDRYTV 1457
F EN K A VIYGDTD V
Sbjct: 721 KQEVENHFRIENGYKNDAVVIYGDTDSVMV 750
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 39/186 (20%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + + IDHY+ P+PG + G KV VP++R++G T G C H+H
Sbjct: 75 PQIDTLAFQQIEIDHYIGKPLPG-------MPGSKVGPVPIMRMFGVTERGNSICCHVHG 127
Query: 66 ALPYLYV------------PCADIPVQLRQED-----DGYMHAISLALEKALK--VKGSA 106
PYL+V P + Q ++D D AI LA+E K + G
Sbjct: 128 FCPYLFVSAPPNFTNNHCKPFKEALNQAVKKDMKSNPDNIQEAI-LAVELVYKQSIYGYG 186
Query: 107 GSKR-----------QHVHECS-LVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGM 154
G+ + + + C L+ +F+ + ES+I F ++F+VD ++ G
Sbjct: 187 GNDKLPFLKITVAVPKLIAPCKRLLEQDTVYTIFNYHYRAFESNIDFDIRFMVDTSVVGC 246
Query: 155 GHLHLS 160
+ LS
Sbjct: 247 SWIELS 252
>gi|124802365|ref|XP_001347450.1| DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
gi|232011|sp|P30315.1|DPOD1_PLAFK RecName: Full=DNA polymerase delta catalytic subunit
gi|23495030|gb|AAN35363.1|AE014831_39 DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
gi|9941|emb|CAA44289.1| DNA Polymerase delta [Plasmodium falciparum]
gi|160270|gb|AAA29589.1| DNA polymerase-delta [Plasmodium falciparum]
Length = 1094
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/469 (29%), Positives = 214/469 (45%), Gaps = 66/469 (14%)
Query: 998 IYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLG 1057
I+ LL C S IP V + E L + + + DPD L G++I L
Sbjct: 348 IFTLLECAS---------IPGSNVIWFNDEKTLLEAWNEFIIRIDPDFLTGYNIINFDLP 398
Query: 1058 FLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIE 1117
++ R L + L + R + DS S +
Sbjct: 399 YILNRGTALNLKKLKFLGRIKNVAS-TVKDSSFSSK------------------------ 433
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
++G +++ GRI +V+ L++ + KL YT+ V+ L+ + + + ++
Sbjct: 434 -QFGTHETKEINIFGRIQFDVYDLIKRDYKLKSYTLNYVSFEFLKEQKEDVHYSIMNDLQ 492
Query: 1178 ASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVES 1237
P +R R Y + L L ++++L I E+ARV G F +L+RG Q +V S
Sbjct: 493 NESP-ESRKRIATYCIKDGVLPLRLIDKLLFIYNYVEMARVTGTPFVYLLTRGQQIKVTS 551
Query: 1238 MLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIA 1297
L R NY + P + + V+EP G+Y +P+ LDF SLYPS+MIA
Sbjct: 552 QLYRKCKELNY--VIPSTYMKVNTNEKYEGATVLEPIKGYYIEPISTLDFASLYPSIMIA 609
Query: 1298 YNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIP---PNGVMYVPPKVRKGV 1354
+NLC+ T + K N H + DL+++ + N + +V V+KG+
Sbjct: 610 HNLCYSTLI------KSN-----------HEVSDLQNDDITTIQGKNNLKFVKKNVKKGI 652
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMP 1414
LP ++EE++ R VK IK I + N RQLALK+ AN YGYT A G++P
Sbjct: 653 LPLIVEELIEARKKVKLLIKN--EKNNITKMVLNGRQLALKISANSVYGYTGASSGGQLP 710
Query: 1415 CAELADSIVQCGRSTLEKAI----SFVNENEKWK--AKVIYGDTDRYTV 1457
C E+A SI GRS +EK SF ++ ++ + VIYGDTD V
Sbjct: 711 CLEVAVSITTLGRSMIEKTKERVESFYCKSNGYEHNSTVIYGDTDSVMV 759
>gi|242817379|ref|XP_002486944.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
stipitatus ATCC 10500]
gi|218713409|gb|EED12833.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1106
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 150/517 (29%), Positives = 239/517 (46%), Gaps = 80/517 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P D + NVV + ++VL C S
Sbjct: 309 LRILSFDIECAGRKGIFPEPNQDPVIQIANVVT-RYGESKPFVRNVFVLDTC-------S 360
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
L I + ++F E + + + L DPD+++G++I +L +RA HL
Sbjct: 361 L--IVNTQIFEFKDEAKMLMAWQQFLQKVDPDVIIGYNIANFDFPYLLDRAKHL------ 412
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
P +++ SE E + + G + G
Sbjct: 413 KCQSFPYFTRLIKNKSEAKETNFSSKQM--------------------GNRDTKSTNTNG 452
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
RI L++ +L++ + L YT+ +V L + + ++T+ F P +R R Y
Sbjct: 453 RIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTIITELFNGTPD-SRRRLAVYC 511
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ-----N 1247
+ A L +M++L + +E+ARV G+ F +LSRG Q + S + R A T+ N
Sbjct: 512 LKDAYLPQRLMDKLMCLINYAEMARVTGVPFNYLLSRGQQVKFISQIFRKARTEQLVIPN 571
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
G ++ A+ V+EP G+Y PV LDF SLYPS++ A+NLC+ T L
Sbjct: 572 LSKQDEGEYEGAT---------VIEPVRGYYDVPVATLDFASLYPSIIQAHNLCYTTLL- 621
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
N V F ++ +D ++ ++ PNG M+ KVRKG+L ++LEE+LS R
Sbjct: 622 -------NQKKVEHF----NLKKD--EDYIVTPNGDMFCTTKVRKGLLSQILEELLSAR- 667
Query: 1368 MVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
K+A ++LA + + + N RQLALK+ AN YG T A G++PC E+A S G
Sbjct: 668 --KRAKRELAVEKDPFKKAVLNGRQLALKVSANSVYGLTGATV-GKLPCLEIASSTTSYG 724
Query: 1427 RSTLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
R +EK A + A+VIYGDTD V
Sbjct: 725 RQMIEKTKAEVEAKYTIANGYSHDAQVIYGDTDSVMV 761
>gi|194749801|ref|XP_001957325.1| GF10365 [Drosophila ananassae]
gi|190624607|gb|EDV40131.1| GF10365 [Drosophila ananassae]
Length = 1092
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 237/514 (46%), Gaps = 70/514 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+ + D + +A V+ + E R++ +
Sbjct: 294 FRILSFDIECAGRKGIFPEAKMDPVIQIANM------------VIRQGEREPFIRNVFTL 341
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
+C +V KE L + + DPDIL G++I + +L RAAHL +
Sbjct: 342 DECAPIIGSQVLCHDKETQLLDRWSAFVREVDPDILTGYNINNFDIPYLLNRAAHLKVKN 401
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R N+ S++ + I + GR ++
Sbjct: 402 FEYLGRI-------------------KNI-------RSVIKEQVIQSKQMGRRENQYVNF 435
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R
Sbjct: 436 EGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGDEQTRRRLAM 494
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++ +L I E+ARV G+ S+L+RG Q +V S LLR A T+ +
Sbjct: 495 YCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLESLLTRGQQIKVMSQLLRKARTKGF-- 552
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+
Sbjct: 553 IMPSYTSQGSDEQFEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCY-------- 603
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELL-IPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
TL + R L +L+D+ + P +V +VR+G+LP +LE +L+ R
Sbjct: 604 ----TTLVLGGTREKLREQENLQDDQVERTPANNYFVKSEVRRGLLPEILESLLAARKRA 659
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+
Sbjct: 660 KNDLK--VETDPFKRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTM 716
Query: 1430 LEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+E + V + + A VIYGDTD V
Sbjct: 717 IEMTKNEVESHYTQANGYESNALVIYGDTDSVMV 750
Score = 55.5 bits (132), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 116/297 (39%), Gaps = 59/297 (19%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + +++Y P+PG + G ++ VPV+R++G T G C H+H
Sbjct: 71 PAKDSLEFQQLDVENYQGQPLPG-------MPGAQLGPVPVVRMFGVTMDGNSVCCHVHG 123
Query: 66 ALPYLYVPC-----------------ADIPVQLRQEDDGYMHAISLA-LEKALKVKGSAG 107
PY Y+ + +R D A+ + L + L + G G
Sbjct: 124 FCPYFYIEAPKKFEERHCEKLQQALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHGYNG 183
Query: 108 SKRQHVHECS------------LVRAKKGGAVFD-KSLQPHESHIPFLLQFLVDYNLYGM 154
K+Q + S L++ + A D + + E++I F ++F+VD ++ G
Sbjct: 184 DKKQRYIKISVTLPRFVAAASRLLKKEVIMAEIDFQDCRAFENNIDFDIRFMVDTSVVGC 243
Query: 155 GHLHLSKLKFR------HPVP--------DAFFPRKFNYSSKQASADFQVIGCGSYPMHL 200
+ L K ++R P+P D F + + S + ++ + P +
Sbjct: 244 NWIELPKGEWRLRSSHSKPLPESRCQIEVDVAFDK---FISHEPEGEWAKVA----PFRI 296
Query: 201 MGHQIKTLSGLNIKVFLSLKEMLQWMVCLIHCSATDIFASSIFLYDDCVGDIVNQRL 257
+ I+ I + ++Q +I + F ++F D+C I +Q L
Sbjct: 297 LSFDIECAGRKGIFPEAKMDPVIQIANMVIRQGEREPFIRNVFTLDECAPIIGSQVL 353
>gi|260826580|ref|XP_002608243.1| hypothetical protein BRAFLDRAFT_125058 [Branchiostoma floridae]
gi|229293594|gb|EEN64253.1| hypothetical protein BRAFLDRAFT_125058 [Branchiostoma floridae]
Length = 1286
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 228/481 (47%), Gaps = 61/481 (12%)
Query: 989 ENDSDHAVEIYVLLYCKSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSFD 1042
E DS + V+ + E R++ + C KV KE + + + + D
Sbjct: 512 EKDSVIQIANMVVRQGEREPFIRNVFTLNTCAPIVGSKVLSFKKEADMLAEWSSFIREVD 571
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
PD++ G++IQ L +L +RAA L +++ P ++ S I ++ I +
Sbjct: 572 PDLVTGYNIQNFDLPYLIKRAATL------KVTKFPFLGRMKDMRSVIKDQNIQSKQM-- 623
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
G+ +++ GR+ ++ +++ + KL YT+ AV+ L+
Sbjct: 624 ------------------GKRENKYVNMEGRVTFDLLQVLLRDYKLRSYTLNAVSYHFLQ 665
Query: 1163 RKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGID 1222
++ + ++T +G + R R Y + A L L ++++L + E+ARV G+
Sbjct: 666 QQKEDVHHSIITD-LQNGSEQTRRRLAVYCLKDALLPLRLLDKLMSVINYMEMARVTGVP 724
Query: 1223 FFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPV 1282
+L+RG Q +V S LLR A Q+ + P S E V+EP G+Y P+
Sbjct: 725 LTYLLTRGQQIKVMSQLLRKAREQDL--VIPAMQSSVSDEQYEG-ATVIEPAKGYYDTPI 781
Query: 1283 VVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNG 1342
LDF SLYPS+M+A+NLC+ T L PS +L D+ + P+G
Sbjct: 782 ATLDFSSLYPSIMMAHNLCYTTLLST--PSSRASLS--------------PDQFIKTPSG 825
Query: 1343 VMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTY 1402
+V +RKG+LP +LE +LS R K +KK + + + RQLALK+ AN Y
Sbjct: 826 NFFVKKTLRKGLLPEILENLLSARKKAKADLKK--ETDPFRKSVLDGRQLALKISANSVY 883
Query: 1403 GYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN------EKWKAKVIYGDTDRYT 1456
G+T A G++PC E++ S+ GR+ +E+ FV E K AKVIYGDTD
Sbjct: 884 GFTGAQV-GKLPCLEISQSVTSFGRTMIEQTRQFVEETYRIALGHKHDAKVIYGDTDSVM 942
Query: 1457 V 1457
V
Sbjct: 943 V 943
Score = 49.7 bits (117), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 40/190 (21%)
Query: 8 SNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
++ S + + +DHY+ P+ G + G V VP++R++G T G H+H
Sbjct: 180 TDSISFQQIDLDHYIGAPMDG-------MPGSSVGPVPIVRMFGVTMEGNSVVCHVHGFS 232
Query: 68 PYLYVP---------CAD--------IPVQLRQEDDGYMHAISLALEKALK--VKGSAGS 108
PY YVP CA + +R D A+ LA+E K + G G+
Sbjct: 233 PYFYVPAKPEFKVEHCAQFRDALNKVVLNDMRSNKDNVKQAV-LAVEMMEKENMYGFHGN 291
Query: 109 KRQHVHECSLVRAK----------KGGAVFDKSL---QPHESHIPFLLQFLVDYNLYGMG 155
+R ++ + +G + L Q ES++ F ++F+VD + G
Sbjct: 292 QRLPFLRITVALPRLIAPAKRLLEQGFSCPGYGLHGYQSFESNVDFEIRFMVDTGVIGCN 351
Query: 156 HLHLSKLKFR 165
+ L K+R
Sbjct: 352 WIELPVGKYR 361
>gi|50308039|ref|XP_454020.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643155|emb|CAG99107.1| KLLA0E01607p [Kluyveromyces lactis]
Length = 1101
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 152/567 (26%), Positives = 261/567 (46%), Gaps = 88/567 (15%)
Query: 920 DC-LQDISQISGPDGRSKPTPLSQ----------IGFQD-PASAGAGEQ-----LTLLSI 962
DC + +S I+ P + + P++Q I ++D A GE L ++S
Sbjct: 259 DCGIVGMSWITLPASKYQLVPVNQRISTCQFEVNINYKDLIAHPAEGEWSHNAPLRIMSF 318
Query: 963 EVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+++ R + P+P +DS+ NVV+++ A + ++ ++ S I
Sbjct: 319 DIECAGRPGVFPEPEHDSVIQIANVVSIS------GAAKPFI----RNVFTVNSCSPITG 368
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
++F KE + H+ + DPD+++G++ +L +RAA LG+ P
Sbjct: 369 SQIFEHDKESDMLEHWRDFIVEVDPDVVIGYNTTNFDFPYLIDRAAALGV------QSFP 422
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
+++ E V S + A +G + +++ GR+ L++
Sbjct: 423 YFGRLSNVKQE---------------VKSSTFSSKA-----YGTRESKNINIDGRLQLDL 462
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
+ ++ E KL YT+ AV+ L + + ++T +G R R Y + A L
Sbjct: 463 LQFVQREYKLRSYTLNAVSAHFLGEQKEDVHHSIITT-LQNGDSETRRRLAVYCLKDAYL 521
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
L +M +L + +E++RV G+ F +L+RG Q +V S L R L I +
Sbjct: 522 PLRLMEKLMALVNYTEMSRVTGVPFMYLLARGQQIKVISQLFRKC-----LQIQTVIPNM 576
Query: 1259 ASQPAMECL--PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+SQ + E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T + + N
Sbjct: 577 SSQGSDEQYEGATVIEPKRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLCDRATVQRLNL 636
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
L ++ ++ PN ++V KVR+GVLP +LEE++ R K +K
Sbjct: 637 --------------KLDEDYIVTPNNDIFVTSKVRRGVLPEILEELIGARKKAKFDLKN- 681
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +E +
Sbjct: 682 -ETDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTSFGRTMIETTKNA 739
Query: 1437 VNENEKWK------AKVIYGDTDRYTV 1457
V K A V+YGDTD V
Sbjct: 740 VENKYCIKNGASHDAVVVYGDTDSVMV 766
>gi|320581797|gb|EFW96016.1| Catalytic subunit of DNA polymerase delta [Ogataea parapolymorpha
DL-1]
Length = 1102
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 235/507 (46%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A D + + ++ +S I
Sbjct: 311 LRILSFDIECAGRKGIFPEAEHDPVIQIANVVAKAGDP------VPFVRNVFTVKSCAPI 364
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+ F E + + + + DPD+++G++I +L RA LG+ SR
Sbjct: 365 VGSETFSYESEEEMLLKWKEFIVKVDPDVIIGYNIANFDFPYLINRARALGVHDFPYFSR 424
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
SK D+ S R +G +++ GR+ L
Sbjct: 425 LK-NSKQEIKDTFFSSRA-------------------------YGSRENKVVNIEGRMQL 458
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ + ++ E KL YT+ AV+ L + + ++T +G R R Y + A
Sbjct: 459 DLLQFIQREYKLRSYTLNAVSAHFLNEQKEDVQHSIITD-LQNGNQETRRRLAVYCLKDA 517
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L L + +L + +E+ARV G+ F +LSRG Q +V S L R + + + +
Sbjct: 518 YLPLRLAEKLMCLVNYTEMARVTGVPFSFLLSRGQQIKVISQLFRKCLDLDIVIPNIKSE 577
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
V + V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L K T
Sbjct: 578 GVNEEYEGAT---VIEPVRGYYDVPIATLDFASLYPSIMMAHNLCYTTLLNK------QT 628
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ + D ++ ++ PNG M+V P +RKG+LP +L+E+L+ R KQ +KK
Sbjct: 629 VERLGLKQD--------EDYIVTPNGDMFVHPHLRKGILPTILQELLAARKKAKQDLKK- 679
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ ++ N RQLALK+ AN YG+T A G++PC ++ S+ GR +E+ +
Sbjct: 680 -ETDPFKKQVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGRVMIEQTKAE 737
Query: 1437 VNEN------EKWKAKVIYGDTDRYTV 1457
V + ++ A+VIYGDTD V
Sbjct: 738 VQRHYSIENGYEYDAQVIYGDTDSVMV 764
>gi|425777959|gb|EKV16108.1| DNA polymerase [Penicillium digitatum Pd1]
gi|425780068|gb|EKV18089.1| DNA polymerase [Penicillium digitatum PHI26]
Length = 1104
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 243/515 (47%), Gaps = 76/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A V Y +++ R++ +
Sbjct: 305 LRVLSFDIECAGRKGIFPEPNMDPVIQIANV------------VTRYGETKPFIRNVFVL 352
Query: 1017 PDCKVFVCS------KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V + KE + + + + DPD+++G++I +L +RA HL
Sbjct: 353 DTCSLIVNTQILEFEKEEKMLNAWRDFVEKVDPDVIIGYNIANFDFPYLLDRAKHL---- 408
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDA-IIEDEWGRTHASGLH 1129
+ P +++ +E AKDA + G +
Sbjct: 409 --KCTGFPYWTRLKGFKTE---------------------AKDANFSSKQMGNRDTKATN 445
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
GRI L++ +L++ + +L YT+ +V+ L+ + + ++T+ F P +R R
Sbjct: 446 TNGRIQLDLLQLVQRDHQLRSYTLNSVSYEFLKEQKEDVHHTMITELFNGTPD-SRRRLA 504
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q L
Sbjct: 505 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKAREQQ-L 563
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
I N + + E V+EP+ G+Y PV LDF SLYPS++ A+NLC+ T L K
Sbjct: 564 VIP--NSKPQDEQDYEG-ATVIEPKRGYYGVPVATLDFASLYPSIIQAHNLCYTTLLNKS 620
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K L++ +D D+ ++ PNG M+ KVRKG+L ++LEE+LS R
Sbjct: 621 SVEK------------LNLKKD--DDYIVTPNGDMFCTTKVRKGLLSQILEELLSAR--- 663
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A ++LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 664 KRAKRELATETDSFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLPIASSTTSYGRQ 722
Query: 1429 TLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + A+VIYGDTD V
Sbjct: 723 MIEKTKQEVEARYTIANGYSHDAEVIYGDTDSVMV 757
>gi|410084320|ref|XP_003959737.1| hypothetical protein KAFR_0K02460 [Kazachstania africana CBS 2517]
gi|372466329|emb|CCF60602.1| hypothetical protein KAFR_0K02460 [Kazachstania africana CBS 2517]
Length = 1132
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 237/513 (46%), Gaps = 71/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P +DS+ NV+++A ++ + C
Sbjct: 350 LRILSFDIECAGRIGVFPEPEHDSVIQIANVMSIAGAKKP-FVRNVFTVDTCAP------ 402
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +++ E + SH+ + DPD+++G++ + +L RA L
Sbjct: 403 ---ITGSRIYSHETEAEMLSHWRDFIVEADPDVIIGYNTGNFDIPYLINRARAL------ 453
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVG 1131
I P ++ EI KD + + +G + +++
Sbjct: 454 KIENFPYFGRLVNVKQEI---------------------KDTVFSSKAYGTRESKNVNID 492
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ L++ + ++ E KL YT+ AV+ L + + + ++T G R R Y
Sbjct: 493 GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIITD-LQHGDSETRRRLAVY 551
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L L ++ +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 552 CLKDAYLPLRLLEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCIQID--TV 609
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P S E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 610 IPNMQSQGSDEQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATV 668
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ L + +D + +I PNG +V K+R+G+LP +LEE++S R K+
Sbjct: 669 ER------------LKLKKD--KDYIITPNGDYFVSDKLRRGILPIILEELISAR---KR 711
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR +
Sbjct: 712 AKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGREMI 770
Query: 1431 EKAISFVNENEKWK------AKVIYGDTDRYTV 1457
+ + V E K A+V+YGDTD V
Sbjct: 771 MRTKTAVQEKYSVKNGYKHDAQVVYGDTDSVMV 803
>gi|358335780|dbj|GAA54399.1| DNA polymerase delta subunit 1 [Clonorchis sinensis]
Length = 1128
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 146/514 (28%), Positives = 237/514 (46%), Gaps = 71/514 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLL--YCKSESHQRSLV 1014
L +LS++++ R + P P D D ++I ++ Y +S R++
Sbjct: 319 LRILSVDIECAGRKGIFPVP--------------DQDPVIQIATMVCNYGESTPFIRNVF 364
Query: 1015 GIPDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI 1068
+ C V S+ E L H+ + DPDI+ G++ Q L +L RA HL +
Sbjct: 365 TLDTCAPIVGSQVVCHKTEKELLEHWAMFVRQVDPDIITGYNTQNFDLPYLINRANHLKV 424
Query: 1069 GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGL 1128
+ R RG A S + + GR
Sbjct: 425 DSFAFLGRV---------------RG-----------ARSTVRDVMTQSKQMGRRENKFT 458
Query: 1129 HVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRC 1188
++ GR+ L++ +++ + KL YT+ AV+ L + + V++ +G R R
Sbjct: 459 NIEGRVQLDLLQILFRDYKLRSYTLNAVSYHFLEEQKEDVEHNVISD-LQNGDAHTRRRL 517
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
Y + A L L ++++L + E+ARV G+ +++RG Q +V S LLR A ++
Sbjct: 518 AVYCLKDAYLPLRLLDKLMCVVNNIEMARVTGVPLTYLITRGQQVKVISQLLRKAREHDF 577
Query: 1249 LAISPGNHQVASQPAMECL-PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
+ + SQ E + V+EP GFY +P+ LDF SLYPS+M+AYNLC+ T
Sbjct: 578 VLPT-----YQSQQGDEYVGATVLEPIKGFYNEPIATLDFASLYPSIMMAYNLCYTT--- 629
Query: 1308 KILPSKENTLGVSSFRPDLHVLR-DLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
L NT G ++ + V R +L D+ + P G +V V +G+LP +LE++LS
Sbjct: 630 --LMQVSNTPGGAAAGLNAFVERYNLSPDDYICTPTGAYFVKSSVHRGLLPEILEQLLSA 687
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R K + K + + R+ + RQLALK+ AN YG+T A G++PC E++ S+
Sbjct: 688 RKKAKADLAK--ETDPLRKRVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISASVTSF 744
Query: 1426 GRSTLEKAISFVN------ENEKWKAKVIYGDTD 1453
GR +++ V A VIYGDTD
Sbjct: 745 GRRMIDQTKEHVEGKFTRANGYAHNAAVIYGDTD 778
Score = 45.4 bits (106), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 41/183 (22%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
D DS IF + + HY + G + G + VP++R++G T G C H
Sbjct: 76 DPGRDSIIF--QQFDVSHYKGDRLAG-------MPGASESPVPIVRLFGITQKGNSVCAH 126
Query: 63 IHRALPYLYVPC-ADIPVQ-----------------LRQEDDGYMHAISLA-LEKALKVK 103
+H +PY YVP D V +E DG H + + E+ +
Sbjct: 127 VHGFVPYFYVPAPKDFSVSHLGTFREALNAALLKDARTKEFDGLKHLVLMVDCEQKQNIY 186
Query: 104 GSAGSKRQHVHECS-----LVRAKK-----GGAVFDKSLQPH---ESHIPFLLQFLVDYN 150
G G ++ + + ++ A K G A + S Q + E++I F ++F+VD
Sbjct: 187 GYHGKRKLPFLKVTVALPRIISAAKRILENGFAFGEYSFQSYPAFEANIDFEIRFMVDTE 246
Query: 151 LYG 153
+ G
Sbjct: 247 ITG 249
>gi|324120766|dbj|BAJ78774.1| DNA polymerase delta catalytic subunit [Panorpa takenouchii]
Length = 1093
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 238/512 (46%), Gaps = 70/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+LS +++ R + P+ ++D + N+V EN+ ++ L C
Sbjct: 298 FRILSFDIECAGRKGIFPEAQHDPVIQIANMVIRQGENEP-FLRNVFTLNTCAP------ 350
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG +VF KE + + + DPDI G++I +L RA HL +
Sbjct: 351 IVG---SQVFSYEKENKMLEKWADFVRQLDPDIFTGYNINNFDFPYLLNRANHLKVKNFE 407
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ R I D +S++ + I + GR ++ G
Sbjct: 408 YLGR------------------IKD--------IKSVVKELVIQSKQMGRRENKSVNFEG 441
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ ++ + KL YT+ AV+ L+ + + ++T + + R R Y
Sbjct: 442 RVPFDLLLVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNESDQTRRRLAVYC 500
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++N+L I E+ARV G+ +L+RG Q +V S LLR + YL
Sbjct: 501 LKDAYLPLRLLNKLMCIVNYMEMARVTGVPLSCLLTRGQQIKVVSQLLRKSKEAGYLM-- 558
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P + S E V+EP+ G+YADP+ LDF SLYPS+M+A+N+C+ T L PS
Sbjct: 559 PVHTGQGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNICYTTLLA---PS 614
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ LG++ D++ P+ +V VR+G+LP +LE +L+ R K+A
Sbjct: 615 NRDKLGLTD------------DQITKTPSNNFFVKGSVRRGLLPEILESLLTAR---KRA 659
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+L + R + + RQLALK+ AN YG+T A G++PC E++ S+ GRS +E
Sbjct: 660 KNELKVEKDPFKRSVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRSMIE 718
Query: 1432 KAISFVNENEKWK------AKVIYGDTDRYTV 1457
V + + A VIYGDTD V
Sbjct: 719 HTKQEVEQRYTKQNGYESDAVVIYGDTDSVMV 750
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + S + + IDHY P+PG + G + +VPV+++YG T AG C H+H
Sbjct: 75 PKVDSISFQQLDIDHYNEKPLPG-------MPGAQSGQVPVMKMYGVTMAGNSVCCHVHG 127
Query: 66 ALPYLYV 72
PYLYV
Sbjct: 128 FSPYLYV 134
>gi|324120716|dbj|BAJ78749.1| DNA polymerase delta catalytic subunit [Teleogryllus emma]
Length = 1089
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 239/512 (46%), Gaps = 70/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHA---VEIYVLLYCKSESHQRSL 1013
+LS +++ R + P+ + D + +A N DH ++ L C +
Sbjct: 298 FRILSFDIECAGRKGIFPEAQQDPVIQIANMVINQGDHEPFLRNVFTLDTCAP------I 351
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V +E + + + DPD+ G++I +L +R+ HL +
Sbjct: 352 VG---CQVLSFKEERDMLEKWADFVREVDPDLFTGYNINNFDFPYLLDRSKHLNAKNFHF 408
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R I D + VV E +L + GR +++ GR
Sbjct: 409 LGR------------------IKD---IKSVVKEQILQ-----SKQMGRRENKSVNMEGR 442
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
++ ++ ++ + KL YT+ AV+ L+ + + +++ G + R R Y +
Sbjct: 443 VLFDLLLVLVRDYKLRSYTLNAVSFHFLQEQKEDVHHNIISD-LQHGDPQTRRRLAVYCL 501
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--AI 1251
A L L ++++L I E+ARV G+ +L+RG Q +V S LLR A + YL A
Sbjct: 502 KDAYLPLRLLDKLMCIINYMEMARVTGVPLSCLLTRGQQIKVVSQLLRTAKPKGYLMPAY 561
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
S G + + A V+EP+ G+Y+DP+ LDF SLYPS+M+A+NLC+ T L +
Sbjct: 562 SSGVQEEQYEGAT-----VIEPKKGYYSDPITTLDFSSLYPSIMMAHNLCYTTLLPSGMK 616
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
K L +D+ P G +V VRKG+LP +LE +L R K
Sbjct: 617 EK---------------LSLTQDQFTKTPAGNFFVKAPVRKGLLPEILENLLGARKRAKA 661
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E
Sbjct: 662 DLKK--ETDPFKQKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIE 718
Query: 1432 KAI----SFVNENEKWK--AKVIYGDTDRYTV 1457
+ S N + ++ A VIYGDTD V
Sbjct: 719 QTKQEVESHFNVSNGYQNDAVVIYGDTDSVMV 750
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 74/198 (37%), Gaps = 50/198 (25%)
Query: 5 QPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
+P ++ + + IDHY P+ G + G + VPV+R+YG T G C H+H
Sbjct: 77 EPQKDVLVFQQIDIDHYTGVPMVG-------MPGAQQGPVPVMRMYGVTMEGNSVCCHVH 129
Query: 65 RALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKKG 124
PY +V D D + H AL A+ + V ++ KK
Sbjct: 130 GFSPYFFVSAPD------GFSDKHCHEFKEALNSAMLADNYIARDKVPVAVLAVEIVKKQ 183
Query: 125 G---------AVFDK-----------------------SLQPH-----ESHIPFLLQFLV 147
+VF K SL PH ES+I F ++F+V
Sbjct: 184 NMVGYRGEDLSVFIKVTVTLPRHIAGAKRLLERGISFSSLPPHSYQFFESNIDFDIRFMV 243
Query: 148 DYNLYGMGHLHLSKLKFR 165
D + G + L ++R
Sbjct: 244 DAEVVGCSWVELPAGEWR 261
>gi|121716875|ref|XP_001275938.1| DNA polymerase delta large chain [Aspergillus clavatus NRRL 1]
gi|119404095|gb|EAW14512.1| DNA polymerase delta large chain [Aspergillus clavatus NRRL 1]
Length = 1105
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 238/514 (46%), Gaps = 74/514 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P +D + +A V Y +S+ R++ +
Sbjct: 308 LRILSFDIECAGRKGIFPEPNHDPVIQIANV------------VTRYGESKPFIRNVFVL 355
Query: 1017 PDCKVFVCS------KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V + KE + + L DPD+++G++I +L +RA HL G
Sbjct: 356 DTCSLIVNTQVLEFDKEEKMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDRAKHLKCGG 415
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
P +++ S+ + + + G +
Sbjct: 416 F------PYWTRMKGILSQATSTNFSSKQM--------------------GNRDTKATNT 449
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GRI L++ +L++ + L YT+ +V+ L+ + + ++T+ + P +R R
Sbjct: 450 NGRIQLDLLQLVQRDYHLRSYTLNSVSYEFLKEQKEDVHHTMITELYNGTPD-SRRRLAV 508
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q L
Sbjct: 509 YCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFLSQLFRKALEQQ-LV 567
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I N + + E V+EP G+Y P+ LDF SLYPS++ A+NLC+ T L K
Sbjct: 568 IP--NMKSTDEQDYEG-ATVIEPIRGYYGVPIATLDFASLYPSIIQAHNLCYTTLLNK-- 622
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
N++ + D D+ ++ PNG M+ KVRKG+L ++LEE+LS R K
Sbjct: 623 ----NSVEKLKLKKD--------DDYIVTPNGDMFCTAKVRKGLLSQILEELLSAR---K 667
Query: 1371 QAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 668 RAKKELAIETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLPIASSTTSYGRQM 726
Query: 1430 LEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + AKVIYGDTD V
Sbjct: 727 IEKTKQEVEAKYTIANGYSHDAKVIYGDTDSVMV 760
>gi|407927598|gb|EKG20487.1| DNA-directed DNA polymerase family B pol2 [Macrophomina phaseolina
MS6]
Length = 1097
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 239/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P D + NVV++A + ++ L C S
Sbjct: 299 LRILSFDIECAGRKGIFPEPNIDPVIQIANVVSIA-GVEKPFIRNVFCLDTC-------S 350
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
L I + +V E + + L DPD+++G++I +L +RA HL G
Sbjct: 351 L--ITNAQVLEFDTEEKMLMKWRDFLEEADPDVIIGYNIANFDFPYLLDRAKHLKCG--- 405
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
R P S++ S+ E + + G + G
Sbjct: 406 ---RFPYWSRLRNTMSQAKETNFSSKQM--------------------GNRDTKATNTNG 442
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
RI L++ +L++ + L YT+ +V L + + ++T+ F +G +R R Y
Sbjct: 443 RIQLDLLQLVQRDYHLRSYTLNSVCAHFLGEQKEDVHHTMITELF-NGDSNSRRRLAVYC 501
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L + ++++L + +E+ARV G+ F +LSRG Q + S L R A Q +
Sbjct: 502 LKDAYLPMRLLDKLMCLVNYTEMARVTGVPFSFLLSRGQQVKFLSQLYRKALEQQL--VI 559
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P +S+ E V+EP G+Y P+ LDF SLYPS++ A+NLC+ T L K
Sbjct: 560 PNLRSESSEDQYEG-ATVIEPTRGYYDVPIATLDFASLYPSVIQAHNLCYTTLLNK---- 614
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
N++ + D ++ ++ PNG ++ KVRKG+L ++ EE+L R KQA
Sbjct: 615 --NSVEKLGLKKD--------EDYIVTPNGDLFCTTKVRKGLLTQIFEELLGAR---KQA 661
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K++ Q + + N RQLALK+ AN YG T A +G++PC +A S GR +E
Sbjct: 662 KKEMGLEQDPFKKAVLNGRQLALKISANSVYGLTGAT-NGKLPCLAIASSTTSYGRQMIE 720
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K V ++ A+VIYGDTD V
Sbjct: 721 KTKEVVEKHYTIANGYSHDAQVIYGDTDSVMV 752
>gi|213406475|ref|XP_002174009.1| DNA polymerase delta catalytic subunit [Schizosaccharomyces japonicus
yFS275]
gi|212002056|gb|EEB07716.1| DNA polymerase delta catalytic subunit [Schizosaccharomyces japonicus
yFS275]
Length = 1067
Score = 184 bits (468), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 150/562 (26%), Positives = 253/562 (45%), Gaps = 89/562 (15%)
Query: 912 IAEPNACADC-------LQDISQISGPDGRSKPTPLSQIGFQDPASAGAGEQLTLLSIEV 964
+ + N +DC +D+ +S D SK PL +LS ++
Sbjct: 240 LRQQNKISDCQIEVWIDYRDLESLSADDKWSKMAPLR-----------------ILSFDI 282
Query: 965 QAESRGDLRPDPRYD---SINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKV 1021
+ R + P+ D I + + ++S ++ + C +VG +V
Sbjct: 283 ECAGRKGVFPEASIDPVIQIASIVTQYGDNSPFVRNVFCIGTCSQ------IVG---TQV 333
Query: 1022 FVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLES 1081
F + + + + K + DPD+++G++I +L ERA L + N + R
Sbjct: 334 FEFEDQREMLAAWAKFIREVDPDVMIGYNICNFDFPYLIERAKVLNVPSFNYLGR----- 388
Query: 1082 KIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRL 1141
+ SE+ E + +G + + GR+ L++ ++
Sbjct: 389 -LTNFRSEVKETSFSSK--------------------AYGTRDSKVTVIPGRLQLDMLQV 427
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
M+ + KL Y++ AV+ L+ + + + ++T +G +R R Y + A L
Sbjct: 428 MQRDYKLRSYSLNAVSAQFLKEQKEDVHYSIITD-LQNGTPDSRRRLAIYCLKDAFLPQR 486
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQ 1261
+M++L +E+ARV G+ F +LSRG Q +V S L R A + + L I N +V
Sbjct: 487 LMDKLMCFVNYTEMARVTGVPFNFLLSRGQQVKVVSQLYRKALSHD-LVIP--NIRVNGT 543
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSS 1321
V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T + T+ +
Sbjct: 544 DEQYEGATVIEPVKGYYDTPIATLDFSSLYPSIMMAHNLCYTTL------TDPETMSRLN 597
Query: 1322 FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
+ D ++ +I PNG +V +RKG+LP + E++L R K +KK +
Sbjct: 598 MKQD--------EDYIITPNGDYFVRSNIRKGLLPLIFEDLLGARKRAKADLKK--ETDP 647
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE 1441
+ + RQLALK+ AN YG+T A +GR+PC ++ S+ GR +EK S V +
Sbjct: 648 FKKAVLDGRQLALKVSANSVYGFTGAT-NGRLPCLAISSSVTSYGRQMIEKTKSVVEQTY 706
Query: 1442 KWK------AKVIYGDTDRYTV 1457
K AKVIYGDTD V
Sbjct: 707 TIKNGYSHDAKVIYGDTDSVMV 728
>gi|324120718|dbj|BAJ78750.1| DNA polymerase delta catalytic subunit [Oyamia lugubris]
Length = 1111
Score = 184 bits (468), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 228/483 (47%), Gaps = 61/483 (12%)
Query: 989 ENDSDHAVEIYVLLYCK--SESHQRSLVG------IPDCKVFVCSKEIHLFSHFIKILCS 1040
E D D ++I ++ C+ +E R++ I C+V E + + + +
Sbjct: 336 EADHDPVIQIANMVVCQGTAEPMIRNVFTLNTCAPIVGCQVLSYDNEREMLLKWSEFVRE 395
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
DPDI+ G++I L +L RA HL + R IT+
Sbjct: 396 VDPDIITGYNINNFDLPYLINRAKHLKAAHFPYLGR------------------ITN--- 434
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+S++ + + + GR +++ GR+ ++ ++ + KL YT+ AV+
Sbjct: 435 -----IQSVIKEQVMQSKQTGRRENKLINIEGRVPFDLLMVLVRDYKLRSYTLNAVSYHF 489
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L+ + + +++ +G + R R Y + A L L ++++L + E+ARV G
Sbjct: 490 LQEQKEDVHHNIISD-LQNGNPQTRRRLAIYCLKDAYLPLRLLDKLMCVINYMEMARVTG 548
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
+ S+L+RG Q +V S LLR A + YL + H E V+EP G+Y+D
Sbjct: 549 VSLGSLLTRGQQIKVVSQLLRKAKEKGYL-MPTYQHSGGGDEQFEG-ATVIEPRKGYYSD 606
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
P+ LDF SLYPS+M+A+NLC+ T L + K L D+ + P
Sbjct: 607 PIATLDFSSLYPSIMMAHNLCYTTLLQGGIKEK---------------LELTPDQYVKTP 651
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
G +V VRKG+LP +LE +L+ R K+ +K+ + ++ + RQLALK+ AN
Sbjct: 652 AGNFFVTAAVRKGLLPEVLESLLAARKHAKEELKQ--ETDPFRQKVLDGRQLALKISANS 709
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN------EKWKAKVIYGDTDR 1454
YG+T A G++PC E++ S+ GR+ +E+ V + + A VIYGDTD
Sbjct: 710 VYGFTGAQV-GKLPCLEISSSVTAYGRTMIEQTKQEVEQKYSVTNGYEHDAMVIYGDTDS 768
Query: 1455 YTV 1457
V
Sbjct: 769 VMV 771
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + + ID+Y PP+ G + G + VP+ R+YG T G C H+H
Sbjct: 100 PAKDSITFQQIDIDNYSGPPVAG-------MPGSSIGPVPIFRMYGVTSEGNSVCCHVHG 152
Query: 66 ALPYLYVPCAD 76
PY +V D
Sbjct: 153 FSPYFFVSAPD 163
>gi|302911020|ref|XP_003050401.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731338|gb|EEU44688.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1104
Score = 184 bits (468), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 146/506 (28%), Positives = 236/506 (46%), Gaps = 65/506 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ ++D + +A + + + +C E+ I
Sbjct: 305 LRILSFDIECAGRKGIFPEAQHDPVIQIANIVTKYGEKKPFVRNV-FCLQETS-----SI 358
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ KE + S + K L + DPDI+ G++I +L +RA HL + +R
Sbjct: 359 VATQILEFEKEEKMLSEWQKFLITTDPDIITGYNISNFDFPYLLDRARHLKVSGFEYWTR 418
Query: 1077 TP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
P + SK A ++ S + + G + GR+
Sbjct: 419 IPSVASK--AKETNFSSK-------------------------QMGNRDTKATNTNGRLQ 451
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ +L++ + L YT+ +V L + + ++T+ F P +R R Y +
Sbjct: 452 LDMLQLIQRDHHLRSYTLNSVCANFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKD 510
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + P
Sbjct: 511 AYLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFISQLFRKALEQKL--VIPNL 568
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
S E V+EP G+Y P+ LDF SLYPS+M A+NLC+ T + K
Sbjct: 569 KSEVSDEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLVSK------K 621
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ + D ++ ++ PNG +V K RKG+L ++LEE+L+ R KQA ++
Sbjct: 622 AIEAFGLQKD--------EDYIVTPNGDTFVTVKQRKGLLAQILEELLAAR---KQAKRE 670
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + + N RQLALK+ AN YG T A +G++PC E+A S GR +EK
Sbjct: 671 LAVEKDPFKKAVLNGRQLALKISANSVYGLTGAT-TGKLPCLEIASSTTSFGRKMIEKTK 729
Query: 1435 SFVNENE-------KWKAKVIYGDTD 1453
V EN A+VIYGDTD
Sbjct: 730 EEV-ENRYNIANGYSHDAQVIYGDTD 754
>gi|321470374|gb|EFX81350.1| hypothetical protein DAPPUDRAFT_317527 [Daphnia pulex]
Length = 1139
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 230/484 (47%), Gaps = 67/484 (13%)
Query: 989 ENDSDHAVEI--YVLLYCKSESHQRSLVGIPDCKVFVCSK------EIHLFSHFIKILCS 1040
E D D ++I V LY ++E R+++ + C + S+ E L + +
Sbjct: 369 EADKDRVIQIANMVSLYGETEPFIRNIMTLDTCAPIIGSQVMSYKLEDELLDKWADFVRE 428
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
DPDI+ G++I L +L RA HL G + + R I D
Sbjct: 429 VDPDIITGYNICNFDLPYLLNRAKHLKRGKFDFLGR------------------IKDK-- 468
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+S + + I + GR +++ GR+ ++ ++ + KL YT+ +V+
Sbjct: 469 ------KSAIKETMIQSKQMGRRENKSINIEGRVQFDLLLVLLRDYKLRSYTLNSVSYHF 522
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L + + ++T+ P + R R Y + A L L ++++L + E+ARV G
Sbjct: 523 LCEQKEDVHHSIITELQEGNP-QTRRRLAVYCLKDAHLPLRLLDKLMCLTNYMEMARVTG 581
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
+ +L+RG Q +V S LLR A Q L H+ + E V+EP G+Y+
Sbjct: 582 VPLSYLLTRGQQIKVVSQLLRKAKEQGLLM---PVHKAEAGEEFEG-ATVIEPIRGYYSQ 637
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
P+ LDF SLYPS+M+A+NLC+ + L P ++ L +D+ + P
Sbjct: 638 PIATLDFSSLYPSIMMAHNLCYTSLLN---PRDKDKLK--------------EDQYIKTP 680
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILH-RIFNARQLALKLIAN 1399
G +V VRKG+LP +LE +L+ R K+A K LA L ++ + RQLALK+ AN
Sbjct: 681 AGNYFVKASVRKGLLPEILEALLAAR---KKAKKDLAVETDPLRKKVLDGRQLALKISAN 737
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK------AKVIYGDTD 1453
YG+T A G++PC E++ S+ GR +EK + V + + AKVIYGDTD
Sbjct: 738 SVYGFTGAQV-GKLPCLEISQSVTAFGRMMIEKTSTEVEAKFRVENGYAHDAKVIYGDTD 796
Query: 1454 RYTV 1457
V
Sbjct: 797 SVMV 800
>gi|255956273|ref|XP_002568889.1| Pc21g18980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590600|emb|CAP96795.1| Pc21g18980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1112
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 242/513 (47%), Gaps = 72/513 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P D + NVV E ++VL C S
Sbjct: 305 LRVLSFDIECAGRKGIFPEPNMDPVIQIANVVTRYGETKP-FIRNVFVLDTC-------S 356
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
L I + ++ KE + + + DPD+++G++I +L +RA HL
Sbjct: 357 L--IVNTQILEFEKEEKMLDAWRDFVEKVDPDVIIGYNIANFDFPYLLDRAKHL------ 408
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDA-IIEDEWGRTHASGLHVG 1131
+ P +++ +E AKDA + G +
Sbjct: 409 KCTGFPYWTRLKGFKTE---------------------AKDANFSSKQMGNRDTKATNTN 447
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GRI L++ +L++ + +L YT+ +V+ L+ + + ++T+ F P +R R Y
Sbjct: 448 GRIQLDLLQLVQRDHQLRSYTLNSVSYEFLKEQKEDVHHTMITELFNGTPD-SRRRLAVY 506
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q L I
Sbjct: 507 CLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKAREQQ-LVI 565
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
N + + E V+EP+ G+Y PV LDF SLYPS++ A+NLC+ T L K
Sbjct: 566 P--NSKPQDEQDYEG-ATVIEPKRGYYGVPVATLDFASLYPSIIQAHNLCYTTLLNKSSV 622
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
K L++ +D ++ ++ PNG M+ KVRKG+L ++LEE+LS R K+
Sbjct: 623 EK------------LNLKKD--EDYIVTPNGDMFCTTKVRKGLLSQILEELLSAR---KR 665
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR +
Sbjct: 666 AKKELATETDSFKKAVLNGRQLALKVSANSVYGLTGATV-GKLPCLPIASSTTSYGRQMI 724
Query: 1431 EK------AISFVNENEKWKAKVIYGDTDRYTV 1457
EK A + A+VIYGDTD V
Sbjct: 725 EKTKQEVEARYTIANGYSHDAEVIYGDTDSVMV 757
Score = 45.8 bits (107), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 40/179 (22%)
Query: 24 PPIPGYD-----ICYSSLQGGKVNEV--PVIRVYGSTPAGQKTCLHIHRALPYLYVPCAD 76
PP+ +D IC+ + + + P IR++G T AGQ CLH+ YLY+
Sbjct: 93 PPLGDFDPAKENICFQQIDAEEATLMGKPAIRLFGVTEAGQSACLHVTGFEHYLYIAA-- 150
Query: 77 IPVQLRQED-DGYMHAISLALEKAL------------KVKGSAGSKRQHVHECSLVRAKK 123
PV + D D Y H + L ++ + G G+++ + + ++ K
Sbjct: 151 -PVSFTKADCDPYKHFLEQKLGQSFTAISSVQLTMRENIYGFQGNQKSYYIKITVTEPKM 209
Query: 124 G-----------GAVFDKSLQPHE------SHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
G++ K + +I +LL+F++D L GM + K+R
Sbjct: 210 AARLRSALETGSGSMNYKGMWSGADGILTFDNIQYLLRFMIDTGLAGMAWVEAIAGKYR 268
>gi|363753924|ref|XP_003647178.1| hypothetical protein Ecym_5625 [Eremothecium cymbalariae DBVPG#7215]
gi|356890814|gb|AET40361.1| hypothetical protein Ecym_5625 [Eremothecium cymbalariae DBVPG#7215]
Length = 1092
Score = 184 bits (466), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 236/511 (46%), Gaps = 67/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P D + NVV++A + + ++ RS
Sbjct: 310 LRILSFDIECAGRVGVFPEPDTDPVIQIANVVSIAGHSKP----------FIRNVFTVRS 359
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I ++F +E + H+ + DPD+++G++ +L RAA L +
Sbjct: 360 CAPITGSQIFEHEREEDMLKHWRDFVVQVDPDVIIGYNTTNFDFPYLINRAAALHVDSFP 419
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
R P + V+ E++ + A +G + +++ G
Sbjct: 420 YFGRLPN---------------------VKQVIKETVFSSKA-----YGTRESKTINIDG 453
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + +R E +L YT+ +V+ L + + +++ + +G R R Y
Sbjct: 454 RLQLDLLQFVRREYQLRSYTLNSVSAHFLGEQKEDVHHTIISSLY-NGDSETRRRLAVYC 512
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++ +L + +E++RV G+ F +++RG Q +V S L R + +
Sbjct: 513 LKDAYLPLRLLEKLMALVNYAEMSRVTGVPFSYLITRGQQIKVISQLFRKCFQID--IVI 570
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P H S + V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K +
Sbjct: 571 PNMHTSPSDEQYQG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKSTVA 629
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ N L++ +D +I PNG +V K R+G+LP +L E++S R K
Sbjct: 630 RLN-------------LKENED-YIITPNGDYFVTEKRRRGILPTILHELISARKRAKTD 675
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K + + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +E
Sbjct: 676 LKN--ETDPFRKDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTSFGRTMIEA 732
Query: 1433 AISFVNENEKWK------AKVIYGDTDRYTV 1457
V E K A VIYGDTD V
Sbjct: 733 TKRAVEEKYTVKNGFSHDAVVIYGDTDSVMV 763
>gi|428182790|gb|EKX51650.1| DNA polymerase delta catalytic subunit [Guillardia theta CCMP2712]
Length = 985
Score = 184 bits (466), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 240/507 (47%), Gaps = 66/507 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFEN-DSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R P+P D + +A + + D+ I+ L C
Sbjct: 186 LRILSFDIECAGRKGCFPEPDKDPVIQIANWVTIQGMDTPIVKNIFTLKSC--------- 236
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I +V E + + + + DPDIL G++I G + +L +RA L +
Sbjct: 237 AAISGAEVHSFEDESEMLQGWRDFVIACDPDILTGYNIVGFDIPYLMDRAKALKVASF-- 294
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
P+ ++ ++I + + + G + + + GR
Sbjct: 295 ----PVLGRMKNSKTKIKKTTFSSAQM--------------------GTRETNEISIDGR 330
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
++ +V + ++ E KL+ YT+ +V L + + +++ +G +R R Y +
Sbjct: 331 VIFDVLQAIQREYKLHSYTLNSVCAKFLGEQKEDVHHSIISD-LQNGDAESRRRLAVYCL 389
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L ++++L I E+ARV G+ +L RG +V S LLR A ++ L
Sbjct: 390 KDAYLPQRLLDKLMFIYNYVEMARVTGVPIGWLLVRGQMLKVMSQLLRKARSKGLLL--- 446
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
N +V S +V+EP+ GFY+DP+ LDF SLYPS+M+A+NLC+ T L SK
Sbjct: 447 PNLKVESTDEKFEGAIVIEPKKGFYSDPIATLDFASLYPSIMMAHNLCYST-----LVSK 501
Query: 1314 EN-TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
E+ +F P +++ + P+G +V P V+KG+LP +L+E+L+ R K
Sbjct: 502 EDLRTNKFNFTP---------EQITVTPHGDTFVKPSVKKGILPEILDELLAARKRAKAD 552
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE- 1431
+KK + I+ + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 553 LKK--ATDPIMKAVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISSSVTAFGREMIEL 609
Query: 1432 -----KAISFVNENEKWKAKVIYGDTD 1453
+A V K + V+YGDTD
Sbjct: 610 TKAKVEAHYTVANGYKHDSVVVYGDTD 636
>gi|406607376|emb|CCH41280.1| DNA polymerase delta catalytic subunit [Wickerhamomyces ciferrii]
Length = 1108
Score = 184 bits (466), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 234/513 (45%), Gaps = 70/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+ +DSI NVV+ + E+ ++ + C
Sbjct: 314 LRILSFDIECAGRKGIFPEAEHDSIIQIANVVSRSGES-RPFVRNVFTVNSCSP------ 366
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I ++F E + + + DPD+++G++ L +L +RA LG+
Sbjct: 367 ---ITGSEIFAHEDERDMLLEWKDFVNKVDPDVIIGYNTTNFDLPYLLDRAKALGLRDFP 423
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
R + K A DS S + +G + +++ G
Sbjct: 424 YFGRL-INIKQEAKDSVFSSKA-------------------------YGTRESKSINIDG 457
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ +V+ L + + ++T +G R R Y
Sbjct: 458 RMQLDLLQFIQREYKLRSYTLNSVSAHFLNEQKEEVQHSIITD-LQNGNSETRRRLAVYC 516
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L + ++ +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 517 LKDAYLPMRLLEKLMCLVNYTEMARVTGVPFSFLLTRGQQIKVISQLFRKCLEIDL--VV 574
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P Q S V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 575 PNLQQGGSSDVQYEGATVIEPHRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNK---- 630
Query: 1313 KENTLGVSSFRPDLHVLRDLKD-ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
P + L+ KD + + P+G +V RKG+LP +LEE+LS R K+
Sbjct: 631 -----------PTIERLKLEKDKDYTVSPSGDFFVKTSQRKGILPIILEELLSAR---KK 676
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A K + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR +
Sbjct: 677 AKKDMKTETDPFKRDVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGRGMI 735
Query: 1431 EKAISFVNENEK------WKAKVIYGDTDRYTV 1457
EK V + + ++VIYGDTD V
Sbjct: 736 EKTKQEVQDKYTIANGYDYDSEVIYGDTDSVMV 768
>gi|365983526|ref|XP_003668596.1| hypothetical protein NDAI_0B03180 [Naumovozyma dairenensis CBS 421]
gi|343767363|emb|CCD23353.1| hypothetical protein NDAI_0B03180 [Naumovozyma dairenensis CBS 421]
Length = 1107
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 236/513 (46%), Gaps = 71/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P D + NVV++ ++ L C
Sbjct: 325 LRILSFDIECAGRVGVFPEPEVDPVIQIANVVSVTGAKKP-FIRNVFTLNSCSP------ 377
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +VF E + SH+ + + DPD+++G++ L +L RA L
Sbjct: 378 ---ITGSQVFSHDTEEEMLSHWRQFILEADPDLIIGYNTTNFDLPYLINRAKAL------ 428
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVG 1131
+ P ++ EI KDAI + +G + +++
Sbjct: 429 KVQDFPYFGRLKNVKQEI---------------------KDAIFSSKAYGTRESKNINID 467
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ L++ + + E KL YT+ AV+ L + + + ++T +G R R Y
Sbjct: 468 GRLQLDLLQFAQREYKLRSYTLNAVSAHFLGEQKEDVHYSIITD-LQNGDSETRRRLAVY 526
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L L ++ +L + +E+ARV G+ F +L+RG Q +V S L R + +
Sbjct: 527 CLKDAYLPLRLLEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKCIQID--TV 584
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 585 IPNMSSQASDEQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATV 643
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ L + +D +E +I PNG +V KVR+G+LP +L+E++ R K+
Sbjct: 644 ER------------LKLKKD--EEYIISPNGDYFVTDKVRRGILPIILDELIQAR---KR 686
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A K L R + N RQLALK+ AN YG+T A G++PC ++ S+ GR +
Sbjct: 687 AKKDLKNETDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGRDMI 745
Query: 1431 EKAISFVNE----NEKWK--AKVIYGDTDRYTV 1457
+ V E N+ + A V+YGDTD V
Sbjct: 746 MTTKNAVEEKYTKNKGYADDAIVVYGDTDSVMV 778
>gi|324120704|dbj|BAJ78743.1| DNA polymerase delta catalytic subunit [Phraortes illepidus]
Length = 1093
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 237/515 (46%), Gaps = 81/515 (15%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKS--ESHQRSLVGI 1016
+LS +++ R + P+P +D + ++I ++ C+ E R++ +
Sbjct: 305 ILSFDIECAGRKGVFPEPEHDPV--------------IQIASMMLCQGNHEPSIRTVFTL 350
Query: 1017 PDCKVFVCSKEIHLFSH--FIKILCSF----DPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C V S+ I S +K F DPDI+ G++I + +L RA HL +
Sbjct: 351 NSCAPIVGSQVISFNSENEMLKTWADFVREVDPDIITGYNINNFDIPYLINRAKHLKVKN 410
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R N+ +S++ + + GR ++
Sbjct: 411 FTYLGRI-------------------KNI-------QSVIKDQVLQSKQMGRRENKHVNF 444
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ +++ ++ + KL YT+ AV+ L+ + + ++T +G + R R
Sbjct: 445 EGRVPFDLYLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGNSQTRRRLAV 503
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL- 1249
Y + A L L ++++L I E++RV G+ +L+RG Q +V S LLR A + YL
Sbjct: 504 YCLKDAYLPLRLLDKLMCIINYMEMSRVTGVSLACLLTRGQQIKVVSQLLRKAREKGYLM 563
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
+ G + + A V+EP G+Y+DP+ LDF SLYPS+M+A+NLC+ T +
Sbjct: 564 PVYASGVQEEQFEGAT-----VIEPRKGYYSDPITTLDFSSLYPSIMMAHNLCYTTLVNG 618
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P K S PD ++ P +V VRKG+LP +LE +LS R
Sbjct: 619 P-PDK------LSLTPDQYIK---------TPASCTFVKSSVRKGLLPEILESLLSARKK 662
Query: 1369 VKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K +K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+
Sbjct: 663 AKVDLKN--ETDPFKRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRT 719
Query: 1429 TLEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+E+ V + K A VIYGDTD V
Sbjct: 720 MIEQTKQEVEQRYCIANGYKHDASVIYGDTDSVMV 754
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
+ D + DS +F + + +DHY P PG + G + VP++R+YG T +G C
Sbjct: 78 ILDPRKDSLVF--QQIDLDHYTGSPRPG-------MPGAQRGTVPIMRMYGITMSGNSVC 128
Query: 61 LHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKAL 100
H+H PY +V D + + AL+KAL
Sbjct: 129 CHVHGFSPYFFVHAPD------NFTNNHCEGFRRALDKAL 162
>gi|366990559|ref|XP_003675047.1| hypothetical protein NCAS_0B05920 [Naumovozyma castellii CBS 4309]
gi|342300911|emb|CCC68676.1| hypothetical protein NCAS_0B05920 [Naumovozyma castellii CBS 4309]
Length = 1099
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 146/515 (28%), Positives = 236/515 (45%), Gaps = 75/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P D + NVV++A + ++ S
Sbjct: 317 LRILSFDIECAGRIGVFPEPEEDPVIQIANVVSVAGAKKP----------FIRNVFTVNS 366
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +VF KE + H+ + + DPD+++G++ L +L RA L
Sbjct: 367 CSPITGSQVFAHDKEEDMLRHWRQFILEADPDVIIGYNTTNFDLPYLINRARAL------ 420
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVG 1131
+ P ++ EI KD I + +G + +++
Sbjct: 421 KVEEFPFFGRLKTVKQEI---------------------KDTIFSSKAYGTRESKNINID 459
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ L++ + + E KL YT+ AV+ L + + + ++T +G R R Y
Sbjct: 460 GRLQLDLLQFAQREYKLRSYTLNAVSAHFLGEQKEDVHYSIITD-LQNGDSETRRRLAVY 518
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L L ++ +L + +E+ARV G+ F +LSRG Q +V S L R + +
Sbjct: 519 CLKDAYLPLRLLEKLMGLVNYTEMARVTGVPFSYLLSRGQQIKVVSQLFRKCIQID--TV 576
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 577 IPNMSSQASDEQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATV 635
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
+ L+ KDE +I PNG +V K+R+G+LP +L+E+++ R K
Sbjct: 636 ER---------------LKLTKDEDYVITPNGDYFVTSKIRRGILPIILDELINAR---K 677
Query: 1371 QAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR-- 1427
+A K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR
Sbjct: 678 RAKKDLKNEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTSFGREM 736
Query: 1428 -----STLEKAISFVNENEKWKAKVIYGDTDRYTV 1457
+ ++ S N E A V+YGDTD V
Sbjct: 737 IMLTKNAVQDKYSKANGYEN-DAIVVYGDTDSVMV 770
>gi|340522830|gb|EGR53063.1| DNA polymerase delta, catalytic subunit [Trichoderma reesei QM6a]
Length = 1105
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 231/512 (45%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + + S I
Sbjct: 306 LRILSFDIECAGRKGIFPEANVDPVIQIANVVTKYGEKKPFIRNVFCLDTTSP------I 359
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ KE + + + L DPDI++G++I +L +RA HL + SR
Sbjct: 360 VATQILDFEKEEQMLHEWQQFLIRVDPDIIIGYNISNFDFPYLLDRAKHLKVQGFEYWSR 419
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P + S + E + + G + GR+ L
Sbjct: 420 IP------SKPSRVKETNFSSKQI--------------------GNRDTKATNTNGRLQL 453
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + L YT+ +V L + + ++T+ F P +R R Y + A
Sbjct: 454 DMLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKDA 512
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA--ISPG 1254
L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + I+P
Sbjct: 513 YLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFVSQLFRKALEQKLVIPNIAPQ 572
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ + A V+EP G+Y P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 573 GSEDQYEGAT-----VIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTTLL-------- 619
Query: 1315 NTLGVSSFRP-DLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
RP D+ + KDE ++ PNG M+V RKG+L ++LEE+LS R KQA
Sbjct: 620 --------RPGDVERFKLKKDEDYIVTPNGDMFVTATKRKGLLAQILEELLSAR---KQA 668
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
++LA + + N RQLALK+ AN YG T A +G++PC +A S GR +E
Sbjct: 669 KRELAQETDPFKKAVLNGRQLALKVSANSVYGLTGAT-TGKLPCLAIASSTTSFGRQMIE 727
Query: 1432 KAISFVNENEKWK------AKVIYGDTDRYTV 1457
K V E A+VIYGDTD V
Sbjct: 728 KTKREVEEKYTIANGYTHDAQVIYGDTDSVMV 759
>gi|224123188|ref|XP_002319016.1| predicted protein [Populus trichocarpa]
gi|222857392|gb|EEE94939.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 183 bits (465), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 99/124 (79%), Gaps = 2/124 (1%)
Query: 2 ADSQP--DSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKT 59
ADSQP S IFS+RIVSIDHYM+PPIPG DICYSS QGGKVNEVPVIRVYGSTPAGQKT
Sbjct: 1 ADSQPADSSKIFSLRIVSIDHYMSPPIPGVDICYSSFQGGKVNEVPVIRVYGSTPAGQKT 60
Query: 60 CLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLV 119
CLH+HRA PYLYVPC DIP+ +E Y I +L + +KG+ GSKRQHVH CSLV
Sbjct: 61 CLHVHRAFPYLYVPCLDIPINGNREGMIYDRNIFSSLCITINLKGNVGSKRQHVHGCSLV 120
Query: 120 RAKK 123
RAKK
Sbjct: 121 RAKK 124
>gi|327276010|ref|XP_003222764.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Anolis
carolinensis]
Length = 1100
Score = 183 bits (465), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 232/510 (45%), Gaps = 75/510 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P D + N+V E D ++ L C
Sbjct: 306 LRVLSFDIECAGRKGIFPEPEKDPVIQIANMVQRQGEKDP-FVRNVFTLQSCAP------ 358
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG +V KE L + + + + DPDI+ G++IQ L +L RA L +
Sbjct: 359 IVG---SQVLCFQKEGELLKAWAEFIRTVDPDIITGYNIQNFDLPYLINRAQTLKVSTFP 415
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ R P +S++ + + GR ++ G
Sbjct: 416 FLGRIP--------------------------ARKSVIRDSSFQSKQMGRRENKVINTEG 449
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R ++ +++ + KL YT+ AV+ L+ + + ++T +G ++R R Y
Sbjct: 450 RAQFDLLQVLLRDYKLRSYTLNAVSYHFLQEQKEDVQHSIITD-LQNGTEQSRRRLAVYC 508
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--- 1249
+ A L L ++ +L + E+ARV G+ +L+RG Q +V S LLR A QN +
Sbjct: 509 LKDAYLPLRLLEKLMCVINYMEMARVTGVPLSYLLARGQQIKVVSQLLRQAVKQNLVMPV 568
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
S G A V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L +
Sbjct: 569 VKSEGGEDYAG-------ATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLQQG 621
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
+ G+S+ D+ + P G +V VRKG+LP +LE +L+ R
Sbjct: 622 AVERH---GLSA------------DKFIRTPTGDHFVKASVRKGLLPEILENLLAARKRA 666
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K+ + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 667 KTELKQ--ETDPFKRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQM 723
Query: 1430 LEKAISFVNENEKWK------AKVIYGDTD 1453
+EK V AKV+YGDTD
Sbjct: 724 IEKTKQLVESKYTIANGYSADAKVVYGDTD 753
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + V +D+Y+ IPG+ S QG VPV+R++G T AG C HIH
Sbjct: 76 PKEDALCFQQVELDYYVGTHIPGFP---GSTQG----PVPVLRMFGVTEAGNSLCCHIHG 128
Query: 66 ALPYLYVPC-----ADIPVQLRQE-----------DDGYMHAISLALEKALK--VKGSAG 107
PY YVP AD + ++E + + + LA+E K + G G
Sbjct: 129 FAPYFYVPAQTGFKADHLAEFQRELNAAVLRDMRSNKDNLSQVVLAVEICNKQNMYGYHG 188
Query: 108 SKRQHVHECSLVRAK-------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGM 154
+ ++ + + G + + Q E++I F ++F+VD ++ G
Sbjct: 189 ENFIPFLKITMAMPRLIAPAKRLLEQGLRCGTLGVHNYQAFEANIDFEIRFMVDRDVVGC 248
Query: 155 GHLHLSKLKFR 165
+ L K+R
Sbjct: 249 NWIELPAGKYR 259
>gi|389582644|dbj|GAB65381.1| DNA polymerase delta catalytic subunit [Plasmodium cynomolgi strain
B]
Length = 1159
Score = 183 bits (464), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 209/453 (46%), Gaps = 59/453 (13%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
IP V S E L + + + DPD L G++I L ++ R L + L +
Sbjct: 421 SIPGSNVIWFSDEKTLLDAWSEFITRLDPDFLTGYNIINFDLPYILNRGTALNLKKLKML 480
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R + I+ VV ES + ++G +++ GRI
Sbjct: 481 GRI---------------KNISS------VVKESSFS-----SKQFGTHETKEININGRI 514
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+V+ L++ + KL YT+ V+ L+ + + + ++ P +R R Y +
Sbjct: 515 QFDVYDLIKRDYKLKSYTLNYVSFEFLKEQKEDVHYSIMNDLQNESP-ESRKRIATYCIK 573
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
L L ++++L I E+ARV G F +L+RG Q +V S L R NY + P
Sbjct: 574 DGILPLRLIDKLLFIYNYVEMARVTGTPFVYLLTRGQQIKVTSQLYRKCKELNY--VIPS 631
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ + V+EP G+Y +P+ LDF SLYPS+MIA+NLC+ T + K
Sbjct: 632 TYIKSGSNEKYEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLV------KN 685
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNG---VMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
N+ + LK E + G + +V V+KG+LP ++EE++ R VK
Sbjct: 686 NS-----------EIEGLKQEEVTSIQGKGNIKFVKRSVKKGILPLIVEELIDARKKVKL 734
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS--- 1428
IK +I + N RQLALK+ AN YGYT A G++PC E+A SI GRS
Sbjct: 735 LIKN--EQNKITKMVLNGRQLALKISANSVYGYTGAASGGQLPCLEVAVSITTLGRSMID 792
Query: 1429 ----TLEKAISFVNENEKWKAKVIYGDTDRYTV 1457
T+EK S N E + + V+YGDTD V
Sbjct: 793 KTKETVEKYYSRSNGFE-YNSTVVYGDTDSVMV 824
>gi|157103868|ref|XP_001648163.1| DNA polymerase delta catalytic subunit [Aedes aegypti]
gi|108869323|gb|EAT33548.1| AAEL014178-PA [Aedes aegypti]
Length = 984
Score = 183 bits (464), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 234/513 (45%), Gaps = 72/513 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+P++D + +A D E R++ +
Sbjct: 190 FRILSFDIECAGRKGIFPEPQHDPVIQIANMVIRQGDQ------------EPFLRNVFTL 237
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C V S+ E L + + DPDIL G++I + +L RA+HL +
Sbjct: 238 NTCAPIVGSQVLSYKTEQELLDKWASFVRELDPDILTGYNINNFDIPYLLNRASHLKVKN 297
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R +T+ S++ + I + G+ ++
Sbjct: 298 FEYLGR------------------VTN--------IRSVIKETVIQSKQMGKRENKYVNF 331
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ AV+ L+ + + ++T + + R R
Sbjct: 332 EGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNENEQTRRRLAM 390
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++N+L + E+ARV G+ +L+RG Q +V S LLR + YL
Sbjct: 391 YCLKDAYLPLRLLNKLMCVVNYMEMARVTGVPLSCLLTRGQQIKVMSQLLRKSKVCGYLI 450
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
P H S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 451 --PSYHGSGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLLQ--- 504
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
P+ + L ++ D++ P ++V VRKG+LP +LE +L+ R K
Sbjct: 505 PANKEKLHLTD------------DQITRTPTNNVFVKSSVRKGILPEILESLLAARKRAK 552
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+K + + + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +
Sbjct: 553 ADLK--VETDPFKRSVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMI 609
Query: 1431 EKAISFVNENEKWK------AKVIYGDTDRYTV 1457
E+ V + + A VIYGDTD V
Sbjct: 610 EQTKQEVEQRYTVENGYENDAVVIYGDTDSVMV 642
>gi|324120744|dbj|BAJ78763.1| DNA polymerase delta catalytic subunit [Metylophorus sp. E-43]
Length = 1036
Score = 183 bits (464), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 233/514 (45%), Gaps = 74/514 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAVEIYVLLYCKSESHQRSLVG 1015
+LS +++ R + P+P +D I + + + S +E R++
Sbjct: 242 FRILSFDIECAGRKGVFPEPNHDPVIQIANMVIKQGS-------------AEPFIRNIFT 288
Query: 1016 IPDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIG 1069
+ C +V KE L + + DPDI G++I +L RA HL +
Sbjct: 289 LDTCAPIIGSQVLCFDKETELLKKWAAFVREVDPDIFTGYNINNFDFPYLINRAKHLNVQ 348
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
+ R I D + V+ +S L + GR ++
Sbjct: 349 DFVYLGR------------------IKD---IKSVIKDSFLQ-----SKQMGRRENKSIN 382
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
GR+ ++ ++ + KL Y++ AV+ L+ + + ++++ GP R R
Sbjct: 383 FEGRVPFDLLLVLTRDYKLRSYSLNAVSYHFLQEQKEDVHHSIISELQQGGP-HTRRRLA 441
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR + +L
Sbjct: 442 VYCLKDAYLPLRLLDKLMCIINYMEMARVTGVALPSLLTRGQQIKVLSQLLRKTREKGFL 501
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
P H E V+EP G+YADP+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 502 M--PAYHGTGGDDQYEG-ATVIEPRKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLQGG 558
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
+ K L +S+ D+ P +V VRKG+LP +LE +L R
Sbjct: 559 VKEK---LDLST------------DQYTKTPAQNYFVHKSVRKGLLPEILENLLDARKKA 603
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + ++ ++ + RQLALK+ AN YG+T A G++PC E++ S+ GRS
Sbjct: 604 KADLKN--ETDELRKKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRSM 660
Query: 1430 LEKAI-----SFVNEN-EKWKAKVIYGDTDRYTV 1457
+E+ F EN K + VIYGDTD V
Sbjct: 661 IEQTRLEVEQKFNIENGYKHDSVVIYGDTDSVMV 694
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 40/187 (21%)
Query: 16 VSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV--- 72
+ IDHY+ + G + G + V ++R+YG T G C H+H +PY +V
Sbjct: 27 IEIDHYVGRAMAG-------MPGVQTGPVSIMRMYGVTMEGNSVCCHVHGFVPYFFVSAP 79
Query: 73 ---------PCAD-----IPVQLRQEDDGYMHAISLALEKALK--VKGSAGSKRQHVHEC 116
P D + LR +G A+ +A+E + V G G +
Sbjct: 80 SGFDEKHCRPFKDALNKVVMADLRSNREGMQEAV-VAVEMVWRQNVYGYRGEDKDLFLRI 138
Query: 117 SLVRAKKGGA--------VFDKSLQPH-----ESHIPFLLQFLVDYNLYGMGHLHLSKLK 163
++ + A + L PH ES+I ++F+VD N+ G + L K
Sbjct: 139 TVTLPRLIAACKRLLEKEIVYSQLGPHHYTSFESNIDVDIRFMVDTNVVGCSWVELPSGK 198
Query: 164 FRHPVPD 170
+R + D
Sbjct: 199 WRIRMKD 205
>gi|384486877|gb|EIE79057.1| hypothetical protein RO3G_03762 [Rhizopus delemar RA 99-880]
Length = 1059
Score = 183 bits (464), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 240/510 (47%), Gaps = 73/510 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A V ++ + + R++ +
Sbjct: 263 LRILSFDIECAGRKGIFPEPSVDPVIQIASV------------VQIHGQKKPFIRNVFTL 310
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C V S+ E L + + DPD+++G++ +L +RA HLG+
Sbjct: 311 DTCAPIVGSQVLCFDDESELLKKWSDFIREVDPDMIIGYNTTNFDFPYLLDRAQHLGV-- 368
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLH 1129
++ P +I+ +E AKD + + +G+ ++
Sbjct: 369 ----NKFPFLGRISGVKTE---------------------AKDTKFQSKAFGQRENKSIN 403
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GR+ L++ + ++ + KL YT+ +V+ L + + ++T+ P R R
Sbjct: 404 LEGRLQLDMLQAIQRDYKLRSYTLNSVSAEFLGEQKEDVHHSIITELQKGNP-ETRRRLA 462
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L L +M++L ++ +E+ARV GI F +L RG Q +V S L R A Q+ L
Sbjct: 463 VYCLKDAFLPLRLMDKLMLLFNYTEMARVTGIPFNYILVRGQQIKVVSQLYRRALEQD-L 521
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
I ++ +P V++PE G+Y P+ LDF SLYPS+M A+NLC+ T L
Sbjct: 522 VIPVIKSEIMDEPYEGAT--VIDPEKGYYDVPITTLDFTSLYPSIMQAHNLCYTTLLK-- 577
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
P LG +++ + E + PN ++V RKG+LP +L ++LS R
Sbjct: 578 -PEVAQRLG---------LVKGVDYE--VTPNNDLFVKATRRKGLLPEILSDLLSARKRA 625
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +KK + + RQLALK+ AN YG+T A G++PC +++ S+ GR
Sbjct: 626 KNDLKK--EKDPFKRAVLDGRQLALKISANSVYGFTGATV-GKLPCLQISSSVTAYGRGM 682
Query: 1430 LEKAISFVNEN------EKWKAKVIYGDTD 1453
+ K V ++ K AKVIYGDTD
Sbjct: 683 IIKTKETVEDHFSKKNGYKHDAKVIYGDTD 712
>gi|83282608|ref|XP_729844.1| DNA polymerase delta catalytic subunit [Plasmodium yoelii yoelii
17XNL]
gi|23488820|gb|EAA21409.1| DNA polymerase delta catalytic subunit [Plasmodium yoelii yoelii]
Length = 1097
Score = 183 bits (464), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 149/517 (28%), Positives = 239/517 (46%), Gaps = 73/517 (14%)
Query: 956 QLTLLSIEVQA---ESRG--DLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQ 1010
+L +LS +++ + +G + + DP +++ L + + A I+ LL C S
Sbjct: 304 KLRILSFDIECIKLDGKGFPEAKTDPIIQISSILYLQGDPIENCAKFIFTLLECAS---- 359
Query: 1011 RSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
IP V + E + + + + DPD L G++I + ++ R L +
Sbjct: 360 -----IPGSNVIWFNDEKTMLEAWNEFVIRIDPDFLTGYNIINFDIPYILNRGTALNLKK 414
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG-LH 1129
L I R + I L KDA + TH + ++
Sbjct: 415 LKYIGRI---------------KNIPS------------LVKDANFSSKQFGTHETKEIN 447
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GRI +V+ L++ + +L YT+ V+ L+ + + + ++ + +R R
Sbjct: 448 INGRIQFDVYDLIKRDYRLKSYTLNYVSFEFLKEQKEDVHYSIMND-LQNENSESRKRIA 506
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + L L ++++L I E+ARV G F +L+RG Q +V S L R NY
Sbjct: 507 TYCIKDGLLPLRLIDKLLFIYNYVEMARVTGTPFVYLLTRGQQIKVTSQLYRKCKELNY- 565
Query: 1250 AISPGNH-QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
I P + +V + E V+EP G+Y +P+ LDF SLYPS+MIA+NLC+ T +
Sbjct: 566 -IIPSTYIKVNNNDKFEG-ATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLI-- 621
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPP--NGVMYVPPKVRKGVLPRLLEEILSTR 1366
+N +S DL+ K+++ P N +V V++GVLP ++EE++ R
Sbjct: 622 -----KNNDEIS----DLN-----KNDITTVPGKNNFKFVKGNVKRGVLPLIVEELIRAR 667
Query: 1367 IMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
VK +K I + N RQLALK+ AN YGYT A G++PC E+A SI G
Sbjct: 668 KNVKAMMKN--EQNPITKMVLNGRQLALKISANSVYGYTGAAAGGQLPCLEIATSITTFG 725
Query: 1427 RSTLEKAISFV------NENEKWKAKVIYGDTDRYTV 1457
RS +EK V N + A V+YGDTD V
Sbjct: 726 RSMIEKTKETVEAYYCKNNGFEHNATVVYGDTDSVMV 762
>gi|320162791|gb|EFW39690.1| DNA polymerase delta1 catalytic subunit [Capsaspora owczarzaki ATCC
30864]
Length = 1295
Score = 183 bits (464), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 234/512 (45%), Gaps = 70/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+ +LS +++ R + P+P D + N+V++ +N ++ L C +
Sbjct: 482 IRILSFDIECAGRKGIFPEPEVDPVIQIANMVSINGDNSKPFVRNVFTLGTCAN------ 535
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG V C+ E L + D DI+ G+++ LG+L RAA L +
Sbjct: 536 IVG---SDVIACATEHELLRKWADFFRVVDADIVTGYNVINFDLGYLLNRAATLKVASF- 591
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
P +I RG+ + +++ +G + + G
Sbjct: 592 -----PFLGRI---------RGVKTTVRFATFSSKA-----------YGTRENKVITMEG 626
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R +V ++++ + KL YT+ AV+ L + + + +++ +G + R R Y
Sbjct: 627 RCPFDVLQILQRDYKLRSYTLNAVSALFLGEQKEDVHYSHISE-LQNGNEQTRRRLAVYC 685
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++ +L + E+ARV G+ F +LSRG Q +V S L R QN +
Sbjct: 686 LKDAYLPLRLLGKLMCVVNYMEMARVTGVPFSYLLSRGQQIKVVSQLFRKVREQNL--VI 743
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P S V+EP G+Y +P+ LDF SLYPS+M+A+NLC+ T + P
Sbjct: 744 PFVESGGSGDTQYEGATVIEPNRGYYENPIATLDFASLYPSIMMAHNLCYTTLVN---PG 800
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
N RP + + P G ++V P +R+GVLP +LE++L R K
Sbjct: 801 MSN-------RPS-------EADCTKTPTGHIFVKPNLRRGVLPEILEDLLEARKRAKND 846
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR----- 1427
+KK + + + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 847 LKK--ETDKFKRAVLDGRQLALKISANSVYGFTGATV-GKLPCLEISSSVTGFGRDMIKQ 903
Query: 1428 --STLEKAISFVNENEKWKAKVIYGDTDRYTV 1457
+EK + N + A+VIYGDTD V
Sbjct: 904 TQEAVEKQYTIAN-GYQHDARVIYGDTDSVMV 934
Score = 49.3 bits (116), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P ++ + + ID YM + G + G + VP++R+YG T AG H+H
Sbjct: 218 PATDALIFQQLEIDTYMGEHLAG-------MPGADASRVPILRMYGVTEAGNSVMCHVHG 270
Query: 66 ALPYLYVPCADI 77
LPY Y P A +
Sbjct: 271 FLPYFYAPAAGL 282
>gi|149056045|gb|EDM07476.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_c
[Rattus norvegicus]
gi|149056048|gb|EDM07479.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_c
[Rattus norvegicus]
Length = 1103
Score = 183 bits (464), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 306 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 357
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 358 PILGAKVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTL------KV 411
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 412 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVVSMVGRV 451
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 452 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 510
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A Q L
Sbjct: 511 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMRQGLLMPVVK 570
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 571 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR---P 620
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 621 GAAQKLGLKP------------DEFIKTPTGDEFVKASVRKGLLPQILENLLSAR---KR 665
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 666 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 724
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 725 EKTKQLVETKYTLENGYDANAKVVYGDTD 753
Score = 43.9 bits (102), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 76/199 (38%), Gaps = 54/199 (27%)
Query: 6 PDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQG--GKVNEVPVIRVYGSTPAGQKTCL 61
P + + + IDHY+ +PP+P +G N VP++R +G T G C
Sbjct: 85 PSTEPLIFQQLEIDHYVGTSPPLP---------EGPPASRNSVPILRAFGVTDEGFSVCC 135
Query: 62 HIHRALPYLYVPC---------------------------------ADIPVQL--RQEDD 86
HIH PY Y P A + ++L R+
Sbjct: 136 HIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSRESMF 195
Query: 87 GYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQF 145
GY H S L L + R+ + + +R G S P+E+++ F ++F
Sbjct: 196 GYHGHGPSPFLRITLALPRLMAPARRLLEQG--IRVPGLGT---PSFAPYEANVDFEIRF 250
Query: 146 LVDYNLYGMGHLHLSKLKF 164
+VD ++ G L L K+
Sbjct: 251 MVDADIVGCNWLELPAGKY 269
>gi|149235442|ref|XP_001523599.1| DNA polymerase delta catalytic subunit [Lodderomyces elongisporus
NRRL YB-4239]
gi|146452578|gb|EDK46834.1| DNA polymerase delta catalytic subunit [Lodderomyces elongisporus
NRRL YB-4239]
Length = 1087
Score = 183 bits (464), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 235/514 (45%), Gaps = 74/514 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A D ++ R++ +
Sbjct: 293 LRILSFDIECAGRKGIFPEAEQDPVIQIANVVSKLGD------------AKPFVRNVFTV 340
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C ++F KE + H+ + DPD+++G++I + +L +RA LG+
Sbjct: 341 NTCAPIIGSQIFEHQKEEDMLLHWKDFVNEVDPDVIIGYNIANFDIPYLLDRAKALGL-- 398
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLH 1129
+ P ++ E+ KDA+ +G +
Sbjct: 399 ----KKFPYFGRLQFVKQEV---------------------KDAVFSSRAYGTRENKVAN 433
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GR+ L++ + ++ E KL YT+ +V+ L + + ++T +G R R
Sbjct: 434 IDGRMQLDLLQFVQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGTKETRRRLA 492
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L L ++++L + +E+ARV G+ F +LSRG Q +V S L R +
Sbjct: 493 VYCLKDAYLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVISQLFRKCLQER-- 550
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ P S E V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T + K
Sbjct: 551 IVIPNMKSEGSNVEFEG-ATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLISK- 608
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
NT + S++ +++ PNG +V P ++G+LP +L E+L+ R
Sbjct: 609 -----NT--IESYKLT-------EEDYTKTPNGDYFVKPNKKQGILPTILNELLTARKKA 654
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + + N RQLALK+ AN YG+T A G++PC ++ S+ GR
Sbjct: 655 KTDLKN--ETDPFKKDVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGREM 711
Query: 1430 LEKAISFVNE------NEKWKAKVIYGDTDRYTV 1457
+EK + V E + AKVIYGDTD V
Sbjct: 712 IEKTKNEVQEYYSKKNGHPYDAKVIYGDTDSVMV 745
>gi|119482197|ref|XP_001261127.1| DNA polymerase delta large chain [Neosartorya fischeri NRRL 181]
gi|119409281|gb|EAW19230.1| DNA polymerase delta large chain [Neosartorya fischeri NRRL 181]
Length = 1105
Score = 182 bits (463), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 238/514 (46%), Gaps = 74/514 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P +D + +A V Y +S+ R++ +
Sbjct: 308 LRILSFDIECAGRKGIFPEPNHDPVIQIANV------------VTRYGESKPFIRNVFVL 355
Query: 1017 PDCKVFVCS------KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V + +E + + L DPD+++G++I +L +RA HL
Sbjct: 356 DTCSLIVNTQILEFDREEKMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDRAKHL---- 411
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ P +++ S+ + + + G +
Sbjct: 412 --KCTGFPYWTRLKGMASQATSTNFSSKQM--------------------GNRDTKATNT 449
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GRI L++ +L++ + L YT+ +V+ L+ + + ++T+ F P +R R
Sbjct: 450 NGRIQLDLLQLVQRDYHLRSYTLNSVSYEFLKEQKEDVHHTMITELFNGTPD-SRRRLAV 508
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q L
Sbjct: 509 YCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFLSQLFRKALEQQ-LV 567
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I N + + E V+EP G+Y P+ LDF SLYPS++ A+NLC+ T L K
Sbjct: 568 IP--NMKSTDEQDYEG-ATVIEPSRGYYGVPIATLDFASLYPSIIQAHNLCYTTLLNK-- 622
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
N++ + D ++ ++ PNG M+ KVRKG+L ++LEE+L+ R K
Sbjct: 623 ----NSVEKLKLKKD--------EDYIVTPNGDMFCTTKVRKGLLSQILEELLAAR---K 667
Query: 1371 QAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 668 RAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLPIASSTTSYGRQM 726
Query: 1430 LEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + AKVIYGDTD V
Sbjct: 727 IEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMV 760
>gi|324120736|dbj|BAJ78759.1| DNA polymerase delta catalytic subunit [Cryptotympana facialis]
Length = 1102
Score = 182 bits (463), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 236/508 (46%), Gaps = 66/508 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSLVG 1015
+LS +++ R + P+P +D + +A + + ++D + ++ L C +VG
Sbjct: 312 ILSFDIECAGRKGIFPEPEHDPVIQIANMVINQGNADPFIRNVFTLNTCAP------IVG 365
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
C+V E + + + DPDIL G++I +L RA HL +
Sbjct: 366 ---CQVISSDNEADMLEKWAAFIREVDPDILTGYNINNFDFPYLINRAKHLNCKNFTFLG 422
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R + I S++ + + + G+ ++ GR+
Sbjct: 423 RI---------------KNI-----------RSVIRQQVLQSKQMGKRENKHVNFEGRVP 456
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ ++ + KL YT+ +V+ L+ + + ++T +G + R R Y +
Sbjct: 457 FDLLLVLLRDYKLRSYTLNSVSYHFLQEQKEDVHHTIITD-LQNGDDQTRRRLAVYCLKD 515
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L ++++L I E++RV G+ S+L+RG Q +V S LLR A +NY+ + G
Sbjct: 516 AYLPLRLLDKLMCIINYMEMSRVTGVSLLSLLTRGQQIKVVSQLLRKAKEKNYVMPTYG- 574
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
V SQ V+EP G+Y P+ LDF SLYPS+MIA+NLC+ T L + N
Sbjct: 575 --VGSQEDQYEGATVIEPIKGYYKVPIATLDFSSLYPSIMIAHNLCYTTLL------QGN 626
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ P D+ P +V +RKG+LP +LE++L+ R K +K
Sbjct: 627 ARERLALTP---------DQFSRTPANYFFVKSSLRKGLLPEILEDLLNARKRAKLDLKN 677
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+
Sbjct: 678 --ETDPFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISSSVTSYGRTMIEQTKQ 734
Query: 1436 FVNEN------EKWKAKVIYGDTDRYTV 1457
V ++ + A V+YGDTD V
Sbjct: 735 EVEQHYCIANGYQHDAVVVYGDTDSVMV 762
Score = 48.5 bits (114), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 5 QPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
+P + + + IDHY P+ G + G ++ VP++R+YG T G C H+H
Sbjct: 80 EPSKDKLVFQQIDIDHYTGSPLAG-------MPGSQIPPVPIMRMYGITMEGNSVCCHVH 132
Query: 65 RALPYLYV 72
PY +V
Sbjct: 133 GFSPYFFV 140
>gi|242070347|ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
gi|241936293|gb|EES09438.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
Length = 1099
Score = 182 bits (463), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/507 (28%), Positives = 246/507 (48%), Gaps = 63/507 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R P+P +D + +A + + + ++ KS S +VG+ D
Sbjct: 310 ILSFDIECAGRKGHFPEPTHDPVIQIANLVTHQGEGQPFVQNVMTLKSCS---PIVGV-D 365
Query: 1019 CKVFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRT 1077
+ F ++I L + FI+ DPDI++G++I + +L ERA L I + R
Sbjct: 366 VRSFDTERDILLAWRDFIR---EVDPDIIIGYNICKFDMPYLIERAEVLKIAEFPILGRI 422
Query: 1078 PLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLN 1137
S++ D+ S R ++G + + + GR+ +
Sbjct: 423 R-NSRVRVRDTTFSSR-------------------------QYGVRESKDVTIEGRVQFD 456
Query: 1138 VWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAK 1197
+ + M+ + KL+ Y++ +V+ L + + +++ +G R R Y + A
Sbjct: 457 LLQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISD-LQNGNSETRRRLAVYCLKDAY 515
Query: 1198 LNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQ 1257
L ++++L I E+ARV G+ +LSRG +V S LLR A +N L I Q
Sbjct: 516 LPQRLLDKLMYIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN-LVIPNIKGQ 574
Query: 1258 VASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTL 1317
+ Q E V+E +GFY P+ LDF SLYPS+M+AYNLC+CT ++P +
Sbjct: 575 GSGQDTFEG-ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCT----LVPPE---- 625
Query: 1318 GVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA 1377
D L + + P+G ++V P+++KG+LP +LEE+L+ R K+A L
Sbjct: 626 -------DARKLNLPPESINKTPSGEIFVKPELQKGILPEILEELLAAR---KRAKADLK 675
Query: 1378 PSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
++ L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 676 EAKDPLERAVLDGRQLALKISANSVYGFTGATV-GQLPCLEISSSVTSYGRQMIEHTKKL 734
Query: 1437 VNEN------EKWKAKVIYGDTDRYTV 1457
V + + A+VIYGDTD V
Sbjct: 735 VEDKFTTVGGYEHNAEVIYGDTDSVMV 761
>gi|186532719|ref|NP_201201.2| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
gi|322510022|sp|Q9LVN7.2|DPOD1_ARATH RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=Protein EMBRYO DEFECTIVE 2780
gi|76262800|gb|ABA41487.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
thaliana]
gi|332010438|gb|AED97821.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
Length = 1095
Score = 182 bits (463), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 242/512 (47%), Gaps = 73/512 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R P+ ++D + N+V L E D + L C +V
Sbjct: 308 VLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGE-DHPFVRNVMTLKSCAP------IV 360
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G+ D F +E+ L + ++ DPDI++G++I L +L ERAA LGI +
Sbjct: 361 GV-DVMSFETEREVLL--AWRDLIRDVDPDIIIGYNICKFDLPYLIERAATLGIEEFPLL 417
Query: 1075 SRTPLESKIAAGDSEISER--GITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
R S++ DS S R GI + +K+ IE G
Sbjct: 418 GRVK-NSRVRVRDSTFSSRQQGIRE-------------SKETTIE--------------G 449
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R ++ + + + KL+ Y++ +V+ L + + ++T +G R R Y
Sbjct: 450 RFQFDLIQAIHRDHKLSSYSLNSVSAHFLSEQKEDVHHSIITD-LQNGNAETRRRLAVYC 508
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L ++++L I E+ARV G+ +L+RG +V S LLR +N +
Sbjct: 509 LKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLARGQSIKVLSQLLRKGKQKNL--VL 566
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P Q S+ V+E +GFY P+ LDF SLYPS+M+AYNLC+CT + P
Sbjct: 567 PNAKQSGSEQGTYEGATVLEARTGFYEKPIATLDFASLYPSIMMAYNLCYCTL---VTPE 623
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
L + P HV + P+G +V ++KG+LP +LEE+L+ R K+A
Sbjct: 624 DVRKLNL----PPEHVTK--------TPSGETFVKQTLQKGILPEILEELLTAR---KRA 668
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
L ++ L + + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 669 KADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCLEISSSVTSYGRQMIE 727
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+ V + ++ A+VIYGDTD V
Sbjct: 728 QTKKLVEDKFTTLGGYQYNAEVIYGDTDSVMV 759
>gi|71002632|ref|XP_755997.1| DNA polymerase delta catalytic subunit Cdc2 [Aspergillus fumigatus
Af293]
gi|66853635|gb|EAL93959.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
fumigatus Af293]
gi|159130051|gb|EDP55165.1| DNA polymerase delta large chain [Aspergillus fumigatus A1163]
Length = 1105
Score = 182 bits (463), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 149/520 (28%), Positives = 241/520 (46%), Gaps = 86/520 (16%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P +D + +A V Y +S+ R++ +
Sbjct: 308 LRILSFDIECAGRKGIFPEPNHDPVIQIANV------------VTRYGESKPFIRNVFVL 355
Query: 1017 PDCKVFVCS------KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V + KE + + L DPD+++G++I +L +RA HL
Sbjct: 356 DTCSLIVNTQILEFDKEEKMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDRAKHL---- 411
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ P +++ +A + S +K + G +
Sbjct: 412 --KCTGFPYWTRLKG--------------MASQATSTSFSSK------QMGNRDTKATNT 449
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GRI L++ +L++ + L YT+ +V+ L+ + + ++T+ F P +R R
Sbjct: 450 NGRIQLDLLQLVQRDYHLRSYTLNSVSYEFLKEQKEDVHHTMITELFNGTPD-SRRRLAV 508
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ---- 1246
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q
Sbjct: 509 YCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFLSQLFRKALEQQLVI 568
Query: 1247 -NYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
N + +++ A+ V+EP G+Y P+ LDF SLYPS++ A+NLC+ T
Sbjct: 569 PNIKSTDEQDYEGAT---------VIEPIRGYYGVPIATLDFASLYPSIIQAHNLCYTTL 619
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILS 1364
L K + K L+ KDE ++ PNG M+ KVRKG+L ++LEE+L+
Sbjct: 620 LNKNIVEK---------------LKLKKDEDYIVTPNGDMFCTTKVRKGLLSQILEELLA 664
Query: 1365 TRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIV 1423
R K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S
Sbjct: 665 AR---KRAKKELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATV-GKLPCLPIASSTT 720
Query: 1424 QCGRSTLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
GR +EK A + AKVIYGDTD V
Sbjct: 721 SYGRQMIEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMV 760
>gi|312376112|gb|EFR23299.1| hypothetical protein AND_13138 [Anopheles darlingi]
Length = 1092
Score = 182 bits (463), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 143/515 (27%), Positives = 237/515 (46%), Gaps = 76/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P++D + +A V+ + E R++ +
Sbjct: 298 LRILSFDIECAGRKGIFPEPQHDPVIQIANM------------VIRQGEQEPFLRNVFTL 345
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C +V + E L + + DPDIL G++I + +L RA+HL +
Sbjct: 346 NTCAPIVGAQVLSYNTEQELLDQWANFVRELDPDILTGYNINNFDIPYLLNRASHLKVSR 405
Query: 1071 LNDISR-TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGL 1128
+ R T + S I KD +I+ + GR +
Sbjct: 406 FEYLGRITNIRSVI----------------------------KDTVIQSKQMGRRENKYV 437
Query: 1129 HVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRC 1188
+ GR+ ++ ++ + KL YT+ AV+ L+ + + ++T + + R R
Sbjct: 438 NFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNESEQTRRRL 496
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
Y + A L L ++N+L I E+ARV G+ +L+RG Q +V S LLR + Y
Sbjct: 497 AMYCLKDAYLPLRLLNKLMCIVNYMEMARVTGVPLSCLLTRGQQIKVMSQLLRKSKVAGY 556
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
L P S+ E V+EP+ G+YA P+ LDF SLYPS+M+A+NLC+ T
Sbjct: 557 LI--PSYQSSGSEEQYEG-ATVIEPKRGYYAKPISTLDFASLYPSIMMAHNLCYTTL--- 610
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
+ P+ ++ L ++ D+L P ++V VRKG+LP +LE +L+ R
Sbjct: 611 VQPNMKDKLNLTP------------DQLTHTPANNVFVKASVRKGLLPEILESLLAARKR 658
Query: 1369 VKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K +K + + + RQLALK+ AN YG+T A G++PC E++ S+ GR+
Sbjct: 659 AKADLK--VETDPFKRSVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRT 715
Query: 1429 TLEKAISFVNENEKWK------AKVIYGDTDRYTV 1457
+E V + + A VIYGDTD V
Sbjct: 716 MIEYTKQEVEQRYTVENGYENDAVVIYGDTDSVMV 750
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
D D+ IF + + IDHY+ P+PG + G ++ VPV+R++G T G C H
Sbjct: 74 DQSTDALIF--QQIDIDHYIGRPMPG-------MPGAQIGPVPVMRMFGVTMEGNSVCAH 124
Query: 63 IHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSL 118
+H PYLY+ R ++ AL+K+ V S +++V E L
Sbjct: 125 VHGFSPYLYIAAP------RGFTKAHLSEFRTALDKS--VLNDMRSNKENVQEAVL 172
>gi|149056046|gb|EDM07477.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_d
[Rattus norvegicus]
gi|149056047|gb|EDM07478.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_d
[Rattus norvegicus]
Length = 964
Score = 182 bits (463), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 306 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 357
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 358 PILGAKVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTL------KV 411
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 412 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVVSMVGRV 451
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 452 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 510
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A Q L
Sbjct: 511 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMRQGLLMPVVK 570
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 571 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 620
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 621 GAAQKLGLKP------------DEFIKTPTGDEFVKASVRKGLLPQILENLLSAR---KR 665
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 666 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 724
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 725 EKTKQLVETKYTLENGYDANAKVVYGDTD 753
Score = 44.3 bits (103), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 76/199 (38%), Gaps = 54/199 (27%)
Query: 6 PDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQG--GKVNEVPVIRVYGSTPAGQKTCL 61
P + + + IDHY+ +PP+P +G N VP++R +G T G C
Sbjct: 85 PSTEPLIFQQLEIDHYVGTSPPLP---------EGPPASRNSVPILRAFGVTDEGFSVCC 135
Query: 62 HIHRALPYLYVPC---------------------------------ADIPVQL--RQEDD 86
HIH PY Y P A + ++L R+
Sbjct: 136 HIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSRESMF 195
Query: 87 GYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQF 145
GY H S L L + R+ + + +R G S P+E+++ F ++F
Sbjct: 196 GYHGHGPSPFLRITLALPRLMAPARRLLEQG--IRVPGLGT---PSFAPYEANVDFEIRF 250
Query: 146 LVDYNLYGMGHLHLSKLKF 164
+VD ++ G L L K+
Sbjct: 251 MVDADIVGCNWLELPAGKY 269
>gi|115387887|ref|XP_001211449.1| DNA polymerase delta catalytic subunit [Aspergillus terreus NIH2624]
gi|114195533|gb|EAU37233.1| DNA polymerase delta catalytic subunit [Aspergillus terreus NIH2624]
Length = 1104
Score = 182 bits (463), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 237/514 (46%), Gaps = 74/514 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A V Y +S+ R++ +
Sbjct: 307 LRILSFDIECAGRKGIFPEPNQDPVIQIANV------------VTRYGESKPFIRNVFVM 354
Query: 1017 PDCKVFVCS------KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V + KE + + L DPD+++G++I +L +RA HL G
Sbjct: 355 DTCSLIVNTQVLEFDKEEKMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDRAKHLKCG- 413
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
R P +++ + S+ E + + G +
Sbjct: 414 -----RFPFWTRLKSIPSQAKETSFSSKQM--------------------GNRDTKATNT 448
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GRI L++ +L++ + L YT+ +V+ L + + ++T+ P +R R
Sbjct: 449 NGRIQLDLLQLVQRDYHLRSYTLNSVSYEFLGEQKEDVHHTMITELHNGTPD-SRRRLAV 507
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q L
Sbjct: 508 YCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQQ-LV 566
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I N + + E V+EP G+Y P+ LDF SLYPS++ A+NLC+ T L K
Sbjct: 567 IP--NQKSNDEQDYEG-ATVIEPVRGYYGVPIATLDFASLYPSIIQAHNLCYTTLLNK-- 621
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
N++ + + D ++ ++ PNG M+ KVRKG+L ++LEE+L+ R K
Sbjct: 622 ----NSVEKLNLKKD--------EDYIVTPNGHMFCTTKVRKGLLSQILEELLTAR---K 666
Query: 1371 QAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
+A K LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 667 KAKKDLAIETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLPIASSTTSYGRQM 725
Query: 1430 LEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + AKVIYGDTD V
Sbjct: 726 IEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMV 759
>gi|125977976|ref|XP_001353021.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
gi|54641772|gb|EAL30522.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
Length = 1092
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 236/514 (45%), Gaps = 70/514 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+ + D + +A V+ + E R++ +
Sbjct: 294 FRILSFDIECAGRKGIFPEAKMDPVIQIANM------------VIRQGEPEPFIRNVFTL 341
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C +V KE + + + DPDIL G++I + +L RAAHL +
Sbjct: 342 NVCAPIIGSQVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDIPYLINRAAHLKVKN 401
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R N+ S++ + + + GR ++
Sbjct: 402 FEYLGRI-------------------KNI-------RSVIKEQVLQSKQMGRRENQYVNF 435
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ E KL YT+ AV+ L+ + + ++T +G + R R
Sbjct: 436 EGRVPFDLLFVLLREYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGDEQTRRRLAM 494
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++ +L I E+ARV G+ +L+RG Q +V S LLR A T+ Y
Sbjct: 495 YCLKDAYLPLRLLEKLMAIVNYMEMARVTGVSLECLLTRGQQIKVLSQLLRKAKTKGY-- 552
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+
Sbjct: 553 IMPSYTPQGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCY-------- 603
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLI-PPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
TL + R L L+DE ++ P +V +VR+G+LP +LE +L+ R
Sbjct: 604 ----TTLVLGGSREKLREKDGLQDEQVVRTPANNYFVKSEVRRGLLPEILESLLAARKRA 659
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+
Sbjct: 660 KNDLK--VETDPFKRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTM 716
Query: 1430 LEKAIS-----FVNEN-EKWKAKVIYGDTDRYTV 1457
+E + + EN + A VIYGDTD V
Sbjct: 717 IELTKNEVESHYTRENGYENDAVVIYGDTDSVMV 750
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 44/203 (21%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P ++ + + +++YM P+PG + G ++ VPV+R++G T G C H+H
Sbjct: 71 PSTDNLEFQQLDVENYMGQPLPG-------MPGAQLGPVPVVRMFGVTMQGNSVCCHVHG 123
Query: 66 ALPYLYVP---------CADIPVQL--------RQEDDGYMHAISLA-LEKALKVKGSAG 107
PY Y+ C + L R D A+ + L + L + G G
Sbjct: 124 FCPYFYIEAPTKFEEYHCEKLQKSLDQKTIADIRNNKDNVQEAVLMVELVEKLSIHGYNG 183
Query: 108 SKRQHVHECS------------LVRAKKGGAVFD-KSLQPHESHIPFLLQFLVDYNLYGM 154
++Q + + L++ + A D + + E++I F ++F+VD + G
Sbjct: 184 DQKQRYIKITVTLPRFVAAASRLLKKEVIMAEIDFQDCRAFENNIDFDIRFMVDTGVVGC 243
Query: 155 GHLHLSKLKFR------HPVPDA 171
+ L + +R P+P++
Sbjct: 244 NWIELPQGHWRLRSGNSKPLPES 266
>gi|149056044|gb|EDM07475.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_b
[Rattus norvegicus]
Length = 1099
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 306 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 357
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 358 PILGAKVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTL------KV 411
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 412 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVVSMVGRV 451
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 452 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 510
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A Q L
Sbjct: 511 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMRQGLLMPVVK 570
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 571 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR---P 620
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 621 GAAQKLGLKP------------DEFIKTPTGDEFVKASVRKGLLPQILENLLSAR---KR 665
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 666 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 724
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 725 EKTKQLVETKYTLENGYDANAKVVYGDTD 753
Score = 44.3 bits (103), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 13/72 (18%)
Query: 6 PDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQG--GKVNEVPVIRVYGSTPAGQKTCL 61
P + + + IDHY+ +PP+P +G N VP++R +G T G C
Sbjct: 85 PSTEPLIFQQLEIDHYVGTSPPLP---------EGPPASRNSVPILRAFGVTDEGFSVCC 135
Query: 62 HIHRALPYLYVP 73
HIH PY Y P
Sbjct: 136 HIHGFAPYFYTP 147
>gi|149056043|gb|EDM07474.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_a
[Rattus norvegicus]
Length = 808
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 306 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 357
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 358 PILGAKVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTL------KV 411
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 412 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVVSMVGRV 451
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 452 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 510
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A Q L
Sbjct: 511 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMRQGLLMPVVK 570
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 571 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 620
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 621 GAAQKLGLKP------------DEFIKTPTGDEFVKASVRKGLLPQILENLLSAR---KR 665
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 666 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 724
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 725 EKTKQLVETKYTLENGYDANAKVVYGDTD 753
Score = 44.7 bits (104), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 76/199 (38%), Gaps = 54/199 (27%)
Query: 6 PDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQG--GKVNEVPVIRVYGSTPAGQKTCL 61
P + + + IDHY+ +PP+P +G N VP++R +G T G C
Sbjct: 85 PSTEPLIFQQLEIDHYVGTSPPLP---------EGPPASRNSVPILRAFGVTDEGFSVCC 135
Query: 62 HIHRALPYLYVPC---------------------------------ADIPVQL--RQEDD 86
HIH PY Y P A + ++L R+
Sbjct: 136 HIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSRESMF 195
Query: 87 GYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQF 145
GY H S L L + R+ + + +R G S P+E+++ F ++F
Sbjct: 196 GYHGHGPSPFLRITLALPRLMAPARRLLEQG--IRVPGLGT---PSFAPYEANVDFEIRF 250
Query: 146 LVDYNLYGMGHLHLSKLKF 164
+VD ++ G L L K+
Sbjct: 251 MVDADIVGCNWLELPAGKY 269
>gi|344299649|gb|EGW30002.1| DNA polymerase delta catalytic subunit [Spathaspora passalidarum NRRL
Y-27907]
Length = 1079
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 237/514 (46%), Gaps = 74/514 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ ++D + +A + S+ R++ +
Sbjct: 285 LRILSFDIECAGRKGIFPEAQHDPVIQIANVVSKSGE------------SKPFVRNVFTV 332
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C ++F +KE + H+ + + DPD+++G++ + +L +RA LG
Sbjct: 333 NTCSPIIGSQIFEHAKEEEMLMHWRQFITEVDPDVIIGYNTSNFDIPYLLDRAKALG--- 389
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLH 1129
L D P ++ E+ KDA+ +G ++
Sbjct: 390 LKDF---PFFGRLKRIKQEV---------------------KDAVFSSRAYGTRENKVVN 425
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GR+ L++ + ++ E KL YT+ +V+ L + + ++T +G R R
Sbjct: 426 IDGRMQLDLLQFVQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGTKETRRRLA 484
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L L ++++L + +E+ARV G+ F +LSRG Q +V S L R ++
Sbjct: 485 VYCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVISQLFRKCLEED-- 542
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
I P + E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 543 IIIPNMKSEGTNEEYEG-ATVIEPIRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLSK- 600
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
S G++ +++ PNG +V R+G+LP +L E+L+ R
Sbjct: 601 --SAIQAYGLT------------EEDYTRTPNGDFFVKSHKRQGILPTILNELLTARKKA 646
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +KK + + N RQLALK+ AN YG+T A G++PC ++ S+ GR
Sbjct: 647 KADLKK--ETDPFKKDVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGREM 703
Query: 1430 LEKAISFVNE------NEKWKAKVIYGDTDRYTV 1457
+EK + V E + A+VIYGDTD V
Sbjct: 704 IEKTKNEVQEYYSKKNGHPFDAQVIYGDTDSVMV 737
>gi|163916151|gb|AAI57513.1| Unknown (protein for MGC:180510) [Xenopus (Silurana) tropicalis]
Length = 911
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 230/510 (45%), Gaps = 75/510 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P D + N+V E D+ ++ L C S
Sbjct: 315 LRVLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQGEKDA-FIRNVFTLGTCSS------ 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG +V +E L + + + DPDI+ G++IQ + +L RA L
Sbjct: 368 IVG---SQVLCFDREDALLKAWADFVRTIDPDIITGYNIQNFDMPYLINRAQTL------ 418
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ P +I + S I + + GR ++ G
Sbjct: 419 KVPNFPFLGRIRSMKSVIRDSSFQSKQM--------------------GRRENKVINTEG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y
Sbjct: 459 RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITD-LQNGNEQTRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY---L 1249
+ A L L +M +L + E+ARV G+ +LSRG Q +V S LLR A Q+ +
Sbjct: 518 LKDAYLPLRLMEKLMCVINYMEMARVTGVPLSYLLSRGQQIKVVSQLLRQAMKQDLVMPV 577
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 578 VKSEGGEDYTG-------ATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL--- 627
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
+ ++ P ++ + P G +V +RKG+LP +LE +L R
Sbjct: 628 ---QSGSIDKYGLSP---------EDFIKTPTGDCFVKASIRKGLLPEILENLLCARKRA 675
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 676 KTELKK--ETDPFKQKVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQM 732
Query: 1430 LEKAISFV------NENEKWKAKVIYGDTD 1453
+EK V + K AKVIYGDTD
Sbjct: 733 IEKTKQLVESKYTLDNGYKADAKVIYGDTD 762
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 40/194 (20%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
+ P + V +DHY+ + G + G VP+IR++G T G C HI
Sbjct: 83 TDPKEQTLCFQQVELDHYVGSHVSG-------MLGATQGPVPIIRMFGITEEGNSVCCHI 135
Query: 64 HRALPYLYVPC---------ADIPVQL--------RQEDDGYMHAISLALEKALK--VKG 104
H PY YVPC +D +L R D A+ LA++ K + G
Sbjct: 136 HGFAPYFYVPCHTGFKQEDLSDFKKELNSAVIKDMRSNKDSISQAV-LAVDVCHKENMYG 194
Query: 105 SAGSKRQHVHECSLV---------RAKKGGAVFDK----SLQPHESHIPFLLQFLVDYNL 151
G K + ++ R + G F + Q +E++I F ++F+VD ++
Sbjct: 195 YHGKKIIPFMKITMALPRLIAPAKRLLEQGLRFGRHPTHCYQAYEANIDFEIRFMVDNDI 254
Query: 152 YGMGHLHLSKLKFR 165
G + L K+R
Sbjct: 255 VGCNWIELPAGKYR 268
>gi|367016721|ref|XP_003682859.1| hypothetical protein TDEL_0G02810 [Torulaspora delbrueckii]
gi|359750522|emb|CCE93648.1| hypothetical protein TDEL_0G02810 [Torulaspora delbrueckii]
Length = 1094
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 233/512 (45%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P++D + NV+++A + ++ S
Sbjct: 312 LRILSFDIECAGRVGVFPEPQHDPVIQIANVMSIAGAKKP----------FVRNVFTVGS 361
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +VF E + H+ + + DPD+++G++ +L +RA L I
Sbjct: 362 CAAITGSQVFPHDSEEDMLKHWRDFVVAADPDVIIGYNTSNFDFPYLIDRAKALKIETFP 421
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
R + V E++ + A +G + +++ G
Sbjct: 422 YFGRLKF---------------------VKQEVKEAIFSSKA-----YGTRESKNVNIDG 455
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + ++T +G R R Y
Sbjct: 456 RLQLDLLQFVQREYKLRSYTLNAVSAHFLGEQKEDVHYSIITS-LQNGDSETRRRLAVYC 514
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +LSRG Q +V S L R +
Sbjct: 515 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLSRGQQIKVVSQLFR--KCMEIETVI 572
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P S E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 573 PNMQSQGSDEQYEG-ATVIEPIRGYYDIPIATLDFNSLYPSIMMAHNLCYTTLCNKA--- 628
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
T+ + + ++ +I PNG +V K+R+G+LP +L+E++S R K+A
Sbjct: 629 ---TVDRMKLKQE--------EDYIITPNGDYFVTSKLRRGILPIILDELISAR---KRA 674
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR +
Sbjct: 675 KKDLKNEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTSFGREMIM 733
Query: 1432 KAISFVNENE------KWKAKVIYGDTDRYTV 1457
V E K A V+YGDTD V
Sbjct: 734 LTKKSVEEKYCVKNGFKHDAVVVYGDTDSVMV 765
>gi|8777309|dbj|BAA96899.1| DNA polymerase III catalytic subunit [Arabidopsis thaliana]
Length = 1081
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 242/512 (47%), Gaps = 73/512 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R P+ ++D + N+V L E D + L C +V
Sbjct: 306 VLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGE-DHPFVRNVMTLKSCAP------IV 358
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G+ D F +E+ L + ++ DPDI++G++I L +L ERAA LGI +
Sbjct: 359 GV-DVMSFETEREVLL--AWRDLIRDVDPDIIIGYNICKFDLPYLIERAATLGIEEFPLL 415
Query: 1075 SRTPLESKIAAGDSEISER--GITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
R S++ DS S R GI + +K+ IE G
Sbjct: 416 GRVK-NSRVRVRDSTFSSRQQGIRE-------------SKETTIE--------------G 447
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R ++ + + + KL+ Y++ +V+ L + + ++T +G R R Y
Sbjct: 448 RFQFDLIQAIHRDHKLSSYSLNSVSAHFLSEQKEDVHHSIITD-LQNGNAETRRRLAVYC 506
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L ++++L I E+ARV G+ +L+RG +V S LLR +N +
Sbjct: 507 LKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLARGQSIKVLSQLLRKGKQKNL--VL 564
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P Q S+ V+E +GFY P+ LDF SLYPS+M+AYNLC+CT + P
Sbjct: 565 PNAKQSGSEQGTYEGATVLEARTGFYEKPIATLDFASLYPSIMMAYNLCYCTL---VTPE 621
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
L + P HV + P+G +V ++KG+LP +LEE+L+ R K+A
Sbjct: 622 DVRKLNL----PPEHVTKT--------PSGETFVKQTLQKGILPEILEELLTAR---KRA 666
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
L ++ L + + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 667 KADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCLEISSSVTSYGRQMIE 725
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+ V + ++ A+VIYGDTD V
Sbjct: 726 QTKKLVEDKFTTLGGYQYNAEVIYGDTDSVMV 757
>gi|24664937|ref|NP_524099.2| DNA-polymerase-delta [Drosophila melanogaster]
gi|13124718|sp|P54358.2|DPOD1_DROME RecName: Full=DNA polymerase delta catalytic subunit
gi|7294203|gb|AAF49555.1| DNA-polymerase-delta [Drosophila melanogaster]
gi|21064603|gb|AAM29531.1| RE60511p [Drosophila melanogaster]
Length = 1092
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 236/514 (45%), Gaps = 70/514 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+ + D + +A V+ + E R++ +
Sbjct: 294 FRILSFDIECAGRKGIFPEAKIDPVIQIANM------------VIRQGEREPFIRNVFTL 341
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
+C +V KE + + + DPDIL G++I +L RAAHL +
Sbjct: 342 NECAPIIGSQVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNRAAHLKVRN 401
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R N+ + V+ E +L + GR ++
Sbjct: 402 FEYLGRI-------------------KNIRS--VIKEQMLQSK-----QMGRRENQYVNF 435
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R
Sbjct: 436 EGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGDEQTRRRLAM 494
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++ +L I E+ARV G+ S+L+RG Q +V S LLR A T+ +
Sbjct: 495 YCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLESLLTRGQQIKVLSQLLRKAKTKGF-- 552
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+
Sbjct: 553 IMPSYTSQGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCY-------- 603
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELL-IPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
TL + R L +L+D+ + P +V +VR+G+LP +LE +L+ R
Sbjct: 604 ----TTLVLGGTREKLRQQENLQDDQVERTPANNYFVKSEVRRGLLPEILESLLAARKRA 659
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+
Sbjct: 660 KNDLK--VETDPFKRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTM 716
Query: 1430 LEKAISFVNENEKW------KAKVIYGDTDRYTV 1457
+E + V + A VIYGDTD V
Sbjct: 717 IEMTKNEVESHYTQANGYENNAVVIYGDTDSVMV 750
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 113/298 (37%), Gaps = 61/298 (20%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + +++Y+ P+PG + G ++ VPV+R++G T G C H+H
Sbjct: 71 PSKHNLEFQQLDVENYLGQPLPG-------MPGAQIGPVPVVRMFGVTMEGNSVCCHVHG 123
Query: 66 ALPYLYVPC-----------------ADIPVQLRQEDDGYMHAISLA-LEKALKVKGSAG 107
PY Y+ + +R D A+ + L + L + G G
Sbjct: 124 FCPYFYIEAPSQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHGYNG 183
Query: 108 SKRQHVHECSLV---------RAKKGGAVFD----KSLQPHESHIPFLLQFLVDYNLYG- 153
K+Q + S+ R K + + + E++I F ++F+VD ++ G
Sbjct: 184 DKKQRYIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVVGC 243
Query: 154 ------MGHLHLSKLKFRHPVP--------DAFFPRKFNYSSKQASADFQVIGCGSYPMH 199
MGH + P+P D F R + S + ++ + P
Sbjct: 244 NWIELPMGHWRIRN-SHSKPLPESRCQIEVDVAFDR---FISHEPEGEWSKVA----PFR 295
Query: 200 LMGHQIKTLSGLNIKVFLSLKEMLQWMVCLIHCSATDIFASSIFLYDDCVGDIVNQRL 257
++ I+ I + ++Q +I + F ++F ++C I +Q L
Sbjct: 296 ILSFDIECAGRKGIFPEAKIDPVIQIANMVIRQGEREPFIRNVFTLNECAPIIGSQVL 353
>gi|430812887|emb|CCJ29720.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1088
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 239/512 (46%), Gaps = 77/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A V LY + R++ I
Sbjct: 296 LRILSFDIECAGRKGIFPEPEIDPVIQIANT------------VTLYGEKIPFIRNVFTI 343
Query: 1017 PDCK--------VFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLG 1067
C +V KE+ L +S F++ DPD+++G++I + +L +RA HL
Sbjct: 344 DTCAQISGTQILSYVDQKELLLSWSKFVQ---KADPDVIIGYNIANFDIPYLIDRAKHL- 399
Query: 1068 IGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASG 1127
I+ P +I E+S + +G +
Sbjct: 400 -----KINNFPYFGRIIRQKCEVSNASFSSKA--------------------YGTRESKS 434
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYR 1187
+ GR+ L++ ++M+ + +L YT+ AV+ L + + ++T +G +R R
Sbjct: 435 TDISGRLQLDMLQIMQRDYRLRSYTLNAVSAQFLNEQKEDVHHSIITD-LQNGTSESRRR 493
Query: 1188 CVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN 1247
Y + A L +M++L + E++RV G+ F +LSRG Q ++ S L R A +
Sbjct: 494 LAVYCLKDAHLPQRLMDKLMSLVNYIEMSRVTGVPFSYLLSRGQQIKIISQLSRKAREEG 553
Query: 1248 YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
+ I P S E V+EP+ G+Y P+V LDF SLYPS+M A+NLC+ T L
Sbjct: 554 F--IIPNIRSDGSDEQYEG-ATVIEPKKGYYNVPIVTLDFSSLYPSIMQAHNLCYTTLLN 610
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
+ TLG F D KD + P N +V +RKG+LP++ E +L+ R
Sbjct: 611 Y---KQIETLG---FEKD-------KDYCVTPEN-YCFVKSHIRKGLLPQIFENLLAARQ 656
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
VK +K + + + RQLALK+ AN YG+T A +G++PC ++ S+ GR
Sbjct: 657 KVKIDLKN--ETDPFKKAVLDGRQLALKISANSVYGFTGAT-NGKLPCLPISSSVTSYGR 713
Query: 1428 STLEKA-----ISFVNEN-EKWKAKVIYGDTD 1453
+E+A + + EN KA VIYGDTD
Sbjct: 714 QMIERAKEEIELKYTIENGYSHKAYVIYGDTD 745
>gi|1027513|emb|CAA61369.1| DNA polymerase delta [Drosophila melanogaster]
Length = 1092
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 236/514 (45%), Gaps = 70/514 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+ + D + +A V+ + E R++ +
Sbjct: 294 FRILSFDIECAGRKGIFPEAKIDPVIQIANM------------VIRQGEREPFIRNVFTL 341
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
+C +V KE + + + DPDIL G++I +L RAAHL +
Sbjct: 342 NECAPIIGSQVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNRAAHLKVRN 401
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R N+ + V+ E +L + GR ++
Sbjct: 402 FEYLGRI-------------------KNIRS--VIKEQMLQSK-----QMGRRENQYVNF 435
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R
Sbjct: 436 EGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGDEQTRRRSAM 494
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++ +L I E+ARV G+ S+L+RG Q +V S LLR A T+ +
Sbjct: 495 YCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLESLLTRGQQIKVLSQLLRKAKTKGF-- 552
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+
Sbjct: 553 IMPSYTSQGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCY-------- 603
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELL-IPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
TL + R L +L+D+ + P +V +VR+G+LP +LE +L+ R
Sbjct: 604 ----TTLVLGGTREKLRQQENLQDDQVERTPANNYFVKSEVRRGLLPEILESLLAARKRA 659
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+
Sbjct: 660 KNDLK--VETDPFKRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTM 716
Query: 1430 LEKAISFVNENEKW------KAKVIYGDTDRYTV 1457
+E + V + A VIYGDTD V
Sbjct: 717 IEMTKNEVESHYTQANGYENNAVVIYGDTDSVMV 750
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 113/298 (37%), Gaps = 61/298 (20%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + +++Y+ P+PG + G ++ VPV+R++G T G C H+H
Sbjct: 71 PSKHNLEFQQLDVENYLGQPLPG-------MPGAQIGPVPVVRMFGVTMEGNSVCCHVHG 123
Query: 66 ALPYLYVPC-----------------ADIPVQLRQEDDGYMHAISLA-LEKALKVKGSAG 107
PY Y+ + +R D A+ + L + L + G G
Sbjct: 124 FCPYFYIEAPSQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHGYNG 183
Query: 108 SKRQHVHECSLV---------RAKKGGAVFD----KSLQPHESHIPFLLQFLVDYNLYG- 153
K+Q + S+ R K + + + E++I F ++F+VD ++ G
Sbjct: 184 DKKQRYIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVVGC 243
Query: 154 ------MGHLHLSKLKFRHPVP--------DAFFPRKFNYSSKQASADFQVIGCGSYPMH 199
MGH + P+P D F R + S + ++ + P
Sbjct: 244 NWIELPMGHWRIRN-SHSKPLPESRCQIEVDVAFDR---FISHEPEGEWSKVA----PFR 295
Query: 200 LMGHQIKTLSGLNIKVFLSLKEMLQWMVCLIHCSATDIFASSIFLYDDCVGDIVNQRL 257
++ I+ I + ++Q +I + F ++F ++C I +Q L
Sbjct: 296 ILSFDIECAGRKGIFPEAKIDPVIQIANMVIRQGEREPFIRNVFTLNECAPIIGSQVL 353
>gi|448536009|ref|XP_003871049.1| Pol3 large subunit of DNA polymerase III [Candida orthopsilosis Co
90-125]
gi|380355405|emb|CCG24924.1| Pol3 large subunit of DNA polymerase III [Candida orthopsilosis]
Length = 1147
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 232/511 (45%), Gaps = 68/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSD---HAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R + P+ +D + +A D ++ + C S
Sbjct: 353 LRILSFDIECAGRKGIFPEAEHDPVIQIANVVSKLGDSKPFVRNVFTVNTCAS------- 405
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I +++ KE + H+ + + DPD+++G++ + +L +RA L
Sbjct: 406 --IIGSQIYEHEKEEDMLFHWKEFVNEVDPDVIIGYNTANFDIPYLLDRARAL------K 457
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVGG 1132
+ + P ++ EI KDA+ +G +++ G
Sbjct: 458 VHKFPYFGRLKGVKQEI---------------------KDAVFSSRAYGTRENKVVNIDG 496
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ +V+ L + + ++T +G R R Y
Sbjct: 497 RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGNKETRRRLAVYC 555
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++++L + +E+ARV G+ F +LSRG Q +V S L R ++ +
Sbjct: 556 LKDAYLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVVSQLFRKCLQED--IVI 613
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P S E V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 614 PNMKSEGSSEEYEG-ATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNK---N 669
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
G++ + + PNG +V P +KG+LP +L E+L+ R K
Sbjct: 670 SIRAFGLT------------EADYTKTPNGDYFVHPDKKKGILPTILNELLTARKKAKTD 717
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K + N RQLALK+ AN YG+T A G++PC ++ S+ GR +EK
Sbjct: 718 LKN--EKDPFKKDVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGREMIEK 774
Query: 1433 AISFVNE------NEKWKAKVIYGDTDRYTV 1457
+ V E + AKVIYGDTD V
Sbjct: 775 TKNEVQEYYSKKNGHPYDAKVIYGDTDSVMV 805
>gi|195442888|ref|XP_002069178.1| GK23632 [Drosophila willistoni]
gi|194165263|gb|EDW80164.1| GK23632 [Drosophila willistoni]
Length = 1093
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 236/516 (45%), Gaps = 74/516 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+ + D + +A N + SE R++ +
Sbjct: 295 FRILSFDIECAGRKGIFPEAKMDPVIQIANMVINQGE------------SEPFIRNIFTL 342
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
+C +V +E L + + DPDIL G++I + +L RA+HL +
Sbjct: 343 KECAPIIGSQVLCHDQETQLLDKWSSFVREVDPDILTGYNINNFDIPYLINRASHLKVKN 402
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R N+ S++ + + + GR ++
Sbjct: 403 FEFLGRI-------------------KNI-------RSVIKEQVLQSKQMGRRENQYVNF 436
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R
Sbjct: 437 EGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGDEQTRRRLAM 495
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++ +L I E+ARV G+ S+L+RG Q +V S LLR A T+ +
Sbjct: 496 YCLKDAYLPLRLLGKLMAIVNYMEMARVTGVPLESLLTRGQQIKVLSQLLRKAKTKGF-- 553
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+ T IL
Sbjct: 554 IMPSYTSQGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTL---IL 609
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
++ L D D++ P +V ++R+G+LP +LE +L+ R K
Sbjct: 610 GGSKDKLKNKGLIQD--------DQVECTPANNYFVKAELRRGLLPEILESLLAARKRAK 661
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+K ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +
Sbjct: 662 ADLK--VEKDPFKRQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMI 718
Query: 1431 EKAISFVN---------ENEKWKAKVIYGDTDRYTV 1457
E + V EN+ A VIYGDTD V
Sbjct: 719 EMTKTEVETHYTRSNGYEND---AVVIYGDTDSVMV 751
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 44/203 (21%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + +++Y+ P+PG + G ++ VPV+R++G T AG C H+H
Sbjct: 72 PSRDNIEFQQLDVENYLGQPLPG-------MPGAQLGPVPVVRMFGVTMAGNSVCCHVHG 124
Query: 66 ALPYLYVPC-----------------ADIPVQLRQEDDGYMHAISLA-LEKALKVKGSAG 107
PY Y+ + +R D A+ L L + L + G G
Sbjct: 125 FCPYFYIAAPSSFEDRHCESFQKSLDQKVIADMRSNKDNVQEAVLLVELVERLNIHGYQG 184
Query: 108 SKRQHVHECSLVRAKKGGA---VFDKSL----------QPHESHIPFLLQFLVDYNLYGM 154
++Q + ++ + A + K + + E++I F ++F+VD + G
Sbjct: 185 DEKQRYIKITVTLPRFVAAASRLLKKEIIMSEIDFQDCRAFENNIDFDIRFMVDTGVVGC 244
Query: 155 GHLHLSKLKFR------HPVPDA 171
+ L K ++R P+P++
Sbjct: 245 NWIELPKGEWRLRSASSKPLPES 267
>gi|194873189|ref|XP_001973157.1| GG13508 [Drosophila erecta]
gi|190654940|gb|EDV52183.1| GG13508 [Drosophila erecta]
Length = 1092
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 236/514 (45%), Gaps = 70/514 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+ + D + +A V+ + E R++ +
Sbjct: 294 FRILSFDIECAGRKGIFPEAKMDPVIQIANM------------VIRQGEREPFIRNVFTL 341
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
+C +V KE + + + DPDIL G++I +L RAAHL +
Sbjct: 342 NECAPIIGSQVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLINRAAHLKVKN 401
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R N+ + V+ E +L + GR ++
Sbjct: 402 FEYLGRI-------------------KNIRS--VIKEQMLQSK-----QMGRRENQYVNF 435
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R
Sbjct: 436 EGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGDEQTRRRLAM 494
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++ +L I E+ARV G+ S+L+RG Q +V S LLR A T+ +
Sbjct: 495 YCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLESLLTRGQQIKVLSQLLRKAKTKGF-- 552
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+
Sbjct: 553 IMPSYTSQGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCY-------- 603
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELL-IPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
TL + R L +L+D+ + P +V +VR+G+LP +LE +L+ R
Sbjct: 604 ----TTLVLGGTREKLREQENLQDDQVERTPANNYFVKSEVRRGLLPEILESLLAARKRA 659
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+
Sbjct: 660 KNDLK--VETDPFKRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTM 716
Query: 1430 LEKAISFVNENEKW------KAKVIYGDTDRYTV 1457
+E + V + A VIYGDTD V
Sbjct: 717 IEMTKNEVESHYSQANGYENNAVVIYGDTDSVMV 750
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/297 (18%), Positives = 112/297 (37%), Gaps = 59/297 (19%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + +++Y+ P+ G + G ++ VPV+R++G T G C H+H
Sbjct: 71 PSKHNLEFQQLDVENYLGQPLLG-------MPGAQIGPVPVVRMFGVTMEGNSVCCHVHG 123
Query: 66 ALPYLYVPC-----------------ADIPVQLRQEDDGYMHAISLA-LEKALKVKGSAG 107
PY Y+ + +R D A+ + L + L + G G
Sbjct: 124 FCPYFYIEAPRQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHGYNG 183
Query: 108 SKRQHVHECSLV---------RAKKGGAVFD----KSLQPHESHIPFLLQFLVDYNLYGM 154
++Q + S+ R K + + + E++I F ++F+VD ++ G
Sbjct: 184 DQKQRYIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVVGC 243
Query: 155 GHLHLSKLKFRH------PVP--------DAFFPRKFNYSSKQASADFQVIGCGSYPMHL 200
+ L +R P+P D F R + S + ++ + P +
Sbjct: 244 NWIELPMGHWRRRNTHSKPLPESRCQIEVDVAFDR---FISHEPEGEWSKVA----PFRI 296
Query: 201 MGHQIKTLSGLNIKVFLSLKEMLQWMVCLIHCSATDIFASSIFLYDDCVGDIVNQRL 257
+ I+ I + ++Q +I + F ++F ++C I +Q L
Sbjct: 297 LSFDIECAGRKGIFPEAKMDPVIQIANMVIRQGEREPFIRNVFTLNECAPIIGSQVL 353
>gi|358375619|dbj|GAA92199.1| DNA polymerase delta large chain [Aspergillus kawachii IFO 4308]
Length = 1105
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 240/517 (46%), Gaps = 80/517 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P +D + +A V Y +S+ R++ +
Sbjct: 308 LRILSFDIECAGRKGIFPEPNHDPVIQIANV------------VTRYGESKPFIRNVFVL 355
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSF-------DPDILMGWDIQGGSLGFLAERAAHLGIG 1069
C + V + +I F K+L ++ DPD+++G++I +L +RA HL
Sbjct: 356 DTCSLIV-NTQILEFKDEAKMLMAWRDFVQKVDPDVIIGYNIANFDFPYLLDRAKHL--- 411
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
+ P +++ S+ E + + G +
Sbjct: 412 ---KCTGFPYWTRLNGVQSQSKETNFSSKQM--------------------GNRDTKSTN 448
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
GRI L++ +L++ + L YT+ +V+ L + + ++T+ + P +R R
Sbjct: 449 TNGRIQLDMLQLVQRDYHLRSYTLNSVSYEFLGEQKEDVHHTMITELYNGTPD-SRRRLA 507
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY- 1248
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q
Sbjct: 508 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQQLV 567
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
+ + N + + A V+EP G+Y P+ LDF SLYPS++ A+NLC+ T L K
Sbjct: 568 IPNTKSNDEQDYEGAT-----VIEPVRGYYGVPIATLDFASLYPSIIQAHNLCYTTLLNK 622
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
+ L+ +KDE ++ PNG M+ KVRKG+L ++LEE+LS R
Sbjct: 623 ---------------NSVERLKLVKDEDYIVTPNGDMFCTAKVRKGLLSQILEELLSAR- 666
Query: 1368 MVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S G
Sbjct: 667 --KRAKKELATETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLPIASSTTSYG 723
Query: 1427 RSTLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
R +EK A + AKVIYGDTD V
Sbjct: 724 RQMIEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMV 760
>gi|302308438|ref|NP_985361.2| AFL189Wp [Ashbya gossypii ATCC 10895]
gi|299790630|gb|AAS53185.2| AFL189Wp [Ashbya gossypii ATCC 10895]
gi|374108589|gb|AEY97495.1| FAFL189Wp [Ashbya gossypii FDAG1]
Length = 1092
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 237/517 (45%), Gaps = 87/517 (16%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P D + NVV++A E S+ R+
Sbjct: 310 LRILSFDIECAGRVGVFPEPEVDPVIQIANVVSIAGE----------------SKPFIRN 353
Query: 1013 LVGIPDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
+ + C ++F E + H+ L DPD+++G++ L +L RAA L
Sbjct: 354 VFTVDTCAPITGSQIFEHETEEAMLKHWRDFLVEVDPDVIIGYNTTNFDLPYLINRAAAL 413
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
++S P ++ ++ V+ E++ + A G +
Sbjct: 414 ------NVSSFPYFGRLVN---------------SKQVIKETVFSSKA-----HGTRESK 447
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+++ GR+ L++++ +R E +L YT+ +V+ L + + ++ G R
Sbjct: 448 SINIEGRLQLDIFQFVRREYQLRSYTLNSVSAHFLGEQKEDVHHSIIAS-LHRGDSETRR 506
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y + A L L ++ +L + +E+ARV G+ F +++RG Q +V S L R
Sbjct: 507 RLAVYCLKDAYLPLRLLEKLMALVNYTEMARVTGVPFPYLITRGQQIKVISQLYRKCLQI 566
Query: 1247 NYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
+ I P H S + V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T
Sbjct: 567 D--TIIPNMHGNHSDDQYQG-ATVIEPIRGYYDIPIATLDFNSLYPSIMMAHNLCYTTLC 623
Query: 1307 GKI----LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEI 1362
K L KEN ++ +I PNG +V K R+G+LP +LEE+
Sbjct: 624 NKATVQRLQLKEN------------------EDYIITPNGDYFVTSKKRRGILPIILEEL 665
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
++ R K +KK + + N RQLALK+ AN YG+T A G++PC ++ S+
Sbjct: 666 IAARQRAKGELKK--ETDPFKKDVLNGRQLALKISANSVYGFTGATV-GKLPCLSISSSV 722
Query: 1423 VQCGRSTLEKAISFVNENEKWK------AKVIYGDTD 1453
GR+ +E V E K A V+YGDTD
Sbjct: 723 TAYGRTMIETTKRAVEEKYTIKNGYKHDAIVVYGDTD 759
>gi|50543418|ref|XP_499875.1| YALI0A08426p [Yarrowia lipolytica]
gi|49645740|emb|CAG83802.1| YALI0A08426p [Yarrowia lipolytica CLIB122]
Length = 1072
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 147/511 (28%), Positives = 233/511 (45%), Gaps = 66/511 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSD---HAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R + PDP+ D I +A D ++ L C
Sbjct: 276 LRVLSFDIECAGRKGVFPDPKIDPIIQIANVVSRQGDTRPFVRNVFTLNTCSP------- 328
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I +V E + + + + DPD+++G++ +L +RA L
Sbjct: 329 --IAGAQVLEHESEGDMLMRWKQFVNEVDPDVIIGYNTTNFDFPYLIDRAKTL------K 380
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
++ P ++ + V+ +S + A +G + L++ GR
Sbjct: 381 LTDFPYFGRLTH---------------IQNVLRDSTFSSKA-----YGTRESKVLNIDGR 420
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
L++ + ++ E KL YT+ AV+ L+ + + ++T +G R R Y +
Sbjct: 421 TQLDLLQFIQREYKLRTYTLNAVSAHFLKEQKEDVHHSIITD-LQNGNADTRRRLAVYCL 479
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L +M++L + +E+ARV G+ F +LSRG Q +V S L R A + P
Sbjct: 480 KDAYLPQRLMDKLMCLINYTEMARVTGVPFSFLLSRGQQIKVISQLFRKALEVG--MVIP 537
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
Q S V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 538 NLKQDGSSEEQYEGATVIEPERGYYDIPIATLDFSSLYPSIMMAHNLCYTTLLDK----- 592
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+ R DL L ++ PNG ++V K RKG+LP +LEE+LS R K +
Sbjct: 593 -----ATVERLDLK----LDEDYHRTPNGDLFVNQKTRKGILPIVLEELLSARKKAKADL 643
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + + + RQLALK+ AN YG+T A G++PC ++ S+ GR ++
Sbjct: 644 KK--ETDPFKKAVLDGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRDMIQFT 700
Query: 1434 ISFVNENEKWK-------AKVIYGDTDRYTV 1457
V EN+ K AKVIYGDTD V
Sbjct: 701 KEQV-ENKYTKANGYPENAKVIYGDTDSVMV 730
>gi|113931510|ref|NP_001039204.1| DNA-directed DNA polymerase delta 1 [Xenopus (Silurana) tropicalis]
gi|89268922|emb|CAJ83173.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Xenopus
(Silurana) tropicalis]
Length = 1109
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 230/510 (45%), Gaps = 75/510 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P D + N+V E D+ ++ L C S
Sbjct: 315 LRVLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQGEKDA-FIRNVFTLGTCSS------ 367
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG +V +E L + + + DPDI+ G++IQ + +L RA L
Sbjct: 368 IVG---SQVLCFDREDALLKAWADFVRTIDPDIITGYNIQNFDMPYLINRAQTL------ 418
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ P +I + S I + + GR ++ G
Sbjct: 419 KVPNFPFLGRIRSMKSVIRDSSFQSKQM--------------------GRRENKVINTEG 458
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y
Sbjct: 459 RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITD-LQNGNEQTRRRLAVYC 517
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY---L 1249
+ A L L +M +L + E+ARV G+ +LSRG Q +V S LLR A Q+ +
Sbjct: 518 LKDAYLPLRLMEKLMCVINYMEMARVTGVPLSYLLSRGQQIKVVSQLLRQAMKQDLVMPV 577
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 578 VKSEGGEDYTG-------ATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL--- 627
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
+ ++ P ++ + P G +V +RKG+LP +LE +L R
Sbjct: 628 ---QSGSIDKYGLSP---------EDFIKTPTGDCFVKASIRKGLLPEILENLLCARKRA 675
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 676 KAELKK--ETDPFKQKVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQM 732
Query: 1430 LEKAISFV------NENEKWKAKVIYGDTD 1453
+EK V + K AKVIYGDTD
Sbjct: 733 IEKTKQLVESKYTLDNGYKADAKVIYGDTD 762
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 40/194 (20%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
+ P + V +DHY+ + G + G VP+IR++G T G C HI
Sbjct: 83 TDPKEQTLCFQQVELDHYVGSHVSG-------MLGATQGPVPIIRMFGITEEGNSVCCHI 135
Query: 64 HRALPYLYVPC---------ADIPVQL--------RQEDDGYMHAISLALEKALK--VKG 104
H PY YVPC +D +L R D A+ LA++ K + G
Sbjct: 136 HGFAPYFYVPCHTGFKQEDLSDFKKELNSAVIKDMRSNKDSISQAV-LAVDVCHKENMYG 194
Query: 105 SAGSKRQHVHECSLV---------RAKKGGAVFDK----SLQPHESHIPFLLQFLVDYNL 151
G K + ++ R + G F + Q +E++I F ++F+VD ++
Sbjct: 195 YHGKKIIPFMKITMALPRLIAPAKRLLEQGLRFGRHPTHCYQAYEANIDFEIRFMVDNDI 254
Query: 152 YGMGHLHLSKLKFR 165
G + L K+R
Sbjct: 255 VGCNWIELPAGKYR 268
>gi|322801992|gb|EFZ22529.1| hypothetical protein SINV_03834 [Solenopsis invicta]
Length = 1072
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 236/513 (46%), Gaps = 72/513 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+ ++D + +A V+ + E R++ +
Sbjct: 278 FRILSFDIECAGREGIFPEAKHDPVIQIANM------------VIRQGEPEPFLRNIFTL 325
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C V S+ E + + + DPDI G++I +L RA HL +
Sbjct: 326 DTCAPIVGSQVLSFNTESLMLEKWADFVRQSDPDIFTGYNINNFDFPYLINRAQHLNVKN 385
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
N + R N+ +S++ + + GR ++
Sbjct: 386 FNFLGRI-------------------KNI-------KSVIKDHVLQSKQMGRRENKSINF 419
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ AV+ L+ + + + +T +G + R R
Sbjct: 420 EGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVQHKDITG-LQNGNAQTRRRLAV 478
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR ++YL
Sbjct: 479 YCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSISSLLTRGQQIKVVSQLLRKTKEKDYLM 538
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
H Q V+EP+ G+Y DP+ LDF SLYPS+++A+NLC+ T L
Sbjct: 539 PVHQGHGTDEQFEGAT---VIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLLT--- 592
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
+K+ L + +D++ P+ +++ +RKG+LP +LE +LS R K
Sbjct: 593 VAKKKELNIQ------------EDQITTTPSNSLFIKSTIRKGILPEILENLLSARKKAK 640
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+K+ + + ++ + RQ ALK+ AN YG+T A G++PC E++ S+ GR+ +
Sbjct: 641 AELKQ--ETDPLKQKVLDGRQYALKVSANSVYGFTGAQM-GKLPCLEISASVTAYGRTMI 697
Query: 1431 EKAIS-----FVNEN-EKWKAKVIYGDTDRYTV 1457
E+ F EN K A VIYGDTD V
Sbjct: 698 ERTKQEVENHFRIENGYKNDAMVIYGDTDSVMV 730
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 39/191 (20%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + + IDHY+ P+PG + G K+ VP++R+YG T G C H+H
Sbjct: 55 PQVDTLAFQQIEIDHYIGKPLPG-------MPGSKIGPVPIMRMYGVTEQGNSVCCHVHG 107
Query: 66 ALPYLYVPCAD-----------------IPVQLRQEDDGYMHAISLALEKALK--VKGSA 106
PYL+V + +R D AI LA+E K + G
Sbjct: 108 FCPYLFVSAPSNFTNNHCKPFKEALNQVVKKDMRSNPDNIQDAI-LAVELVYKQSMYGYG 166
Query: 107 GSKR-----------QHVHECS-LVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGM 154
G+ + + + C L+ VF+ + ES+I F ++F+VD ++ G
Sbjct: 167 GNDKLPFLKITVAVPKLIAPCKRLLEQNDVYTVFNHHYRAFESNIDFDIRFMVDTSVVGC 226
Query: 155 GHLHLSKLKFR 165
+ L K++
Sbjct: 227 SWIELPPGKWK 237
>gi|254587977|ref|NP_035261.3| DNA polymerase delta catalytic subunit [Mus musculus]
gi|341940458|sp|P52431.2|DPOD1_MOUSE RecName: Full=DNA polymerase delta catalytic subunit
gi|74139374|dbj|BAE40829.1| unnamed protein product [Mus musculus]
gi|74195649|dbj|BAE39632.1| unnamed protein product [Mus musculus]
gi|74223279|dbj|BAE40772.1| unnamed protein product [Mus musculus]
Length = 1105
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 147/506 (29%), Positives = 232/506 (45%), Gaps = 67/506 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 308 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 359
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 360 PILGAKVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQAL------KV 413
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 414 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVISMVGRV 453
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 454 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 512
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A Q L P
Sbjct: 513 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMRQGLLM--PV 570
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
S+ V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 571 VKTEGSEDYTGAT--VIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR---PGAA 625
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
LG+ DE + P G +V VRKG+LP++LE +LS R K+A
Sbjct: 626 QKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KRAKA 670
Query: 1375 KLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
+LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +EK
Sbjct: 671 ELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIEKT 729
Query: 1434 ISFVNENEKWK------AKVIYGDTD 1453
V + AKV+YGDTD
Sbjct: 730 KQLVESKYTVENGYDANAKVVYGDTD 755
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 50/197 (25%)
Query: 6 PDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
P + + + IDHY+ APP+P + N VP++R +G T G C HI
Sbjct: 87 PSTEPLIFQQLEIDHYVGSAPPLPEGPL-------PSRNSVPILRAFGVTDEGFSVCCHI 139
Query: 64 HRALPYLYVPC-----ADIPVQLRQEDD------------------------------GY 88
PY Y P A+ +L+QE + GY
Sbjct: 140 QGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRESMFGY 199
Query: 89 M-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLV 147
H S L L + R+ + + VR G S P+E+++ F ++F+V
Sbjct: 200 HGHGPSPFLRITLALPRLMAPARRLLEQG--VRVPGLGT---PSFAPYEANVDFEIRFMV 254
Query: 148 DYNLYGMGHLHLSKLKF 164
D ++ G L L K+
Sbjct: 255 DADIVGCNWLELPAGKY 271
>gi|395858290|ref|XP_003801504.1| PREDICTED: DNA polymerase delta catalytic subunit [Otolemur
garnettii]
Length = 1108
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 233/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 311 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTL--------RPCA 362
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV KE L + + + DPD++ G++IQ L +L RA L +
Sbjct: 363 PILGAKVQSYEKEEDLLQAWSNFIRNMDPDVITGYNIQNFDLPYLISRAQTL------KV 416
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
P ++A S I + + GR + + + GR+
Sbjct: 417 QTFPFLGRVAGLRSNIRDSSFQSKQM--------------------GRRESKVVSMVGRV 456
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 457 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVYCLK 515
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + +
Sbjct: 516 DAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMREGLVMPVVK 575
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 576 SEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 625
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG++ +D+ + P G +V VRKG+LP++LE +LS R K+
Sbjct: 626 GAAQKLGLT------------EDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR---KR 670
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 671 AKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 729
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 730 EKTKQLVESKYTVENGYSTSAKVVYGDTD 758
Score = 49.7 bits (117), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG + VPV+R +G T G C
Sbjct: 88 DPQAEPLIF--QQLEIDHYVGPACPLPGRPL-------PSTGSVPVLRAFGVTDEGISVC 138
Query: 61 LHIHRALPYLYVPC---------------------------------ADIPVQL--RQED 85
HIH PY Y P A + V+L R+
Sbjct: 139 CHIHGFAPYFYTPAPLGFGPEHLSDLQRELNGAISRDQRGGKELAGPAVVAVELCSRESM 198
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L L + R+ + + +R G S P+E+++ F ++
Sbjct: 199 FGYHGHGPSPFLRITLALPRLVAPARRLLEQG--IRVPGLGT---PSFAPYETNVDFEIR 253
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 254 FMVDTDIVGCNWLELPAAKY 273
>gi|353237606|emb|CCA69575.1| probable DNA polymerase delta catalytic subunit [Piriformospora
indica DSM 11827]
Length = 1069
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 234/507 (46%), Gaps = 63/507 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R PD + D + +A + I + + +H +VG
Sbjct: 283 ILSFDIECAGRKGTFPDAKIDPVIQIANMVTRQGESKPFIRNVFTLNTCAH---IVG--- 336
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
+V E ++ + + DPDI++G++I +L +RA L + + R
Sbjct: 337 SQVISHQHEGNMLQAWSDFVKRVDPDIIIGYNIANFDFPYLMDRAEALKVKEFPYLGRLT 396
Query: 1079 LESKIAAGDSEISER--GITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
SK + S + G D +K+ ++E GR+ L
Sbjct: 397 -HSKTYVRTTHFSSKAYGTRD-------------SKETVLE--------------GRLQL 428
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ + KL Y++ +V L + + V+T +G +R R Y + A
Sbjct: 429 DIIQVMQRDYKLRSYSLNSVCAHFLGEQKEDVHHSVITD-LQNGTPESRRRLAVYCLKDA 487
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV GI F +LSRG +V S L R A+++ YL P
Sbjct: 488 YLPQRLMDKLMCFINYTEMARVTGIPFNYLLSRGQSIKVVSQLYRRANSEGYLI--PATK 545
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+ E V+EP GFY P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 546 SEGGEDQYEG-ATVIEPSRGFYKKPIATLDFSSLYPSIMMAHNLCYTTLLNKDTIDR--- 601
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
L ++RD+ + + PN + K RKG+LP +LE++++ R K +KK
Sbjct: 602 ---------LGLIRDV--DYIQTPNKDFFATTKRRKGLLPTVLEDLIAARKRAKADLKK- 649
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E+ +
Sbjct: 650 -ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLEISSSVTAYGRQMIERTKTV 707
Query: 1437 VNEN------EKWKAKVIYGDTDRYTV 1457
V KW A+VIYGDTD V
Sbjct: 708 VESQFSIANGRKWDARVIYGDTDSVMV 734
>gi|115530809|emb|CAL49423.1| REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like
[Xenopus (Silurana) tropicalis]
Length = 517
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/165 (56%), Positives = 118/165 (71%), Gaps = 4/165 (2%)
Query: 1292 PSMMIAYNLCFCTCLGKI--LPSKEN-TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPP 1348
PS++IAYN C+ TCLG I L E+ G SS + +L L+ ++ + PNGV +V
Sbjct: 7 PSIVIAYNYCYSTCLGNIENLGKYEDFKFGCSSLQVPPDLLYQLRHDITVSPNGVAFVKA 66
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAG 1408
VRKGVLPR+LEEIL TRIMVKQ++KK + L R+ +ARQL LKLIANVT+GYTAA
Sbjct: 67 CVRKGVLPRMLEEILKTRIMVKQSMKKYKHDKG-LTRLLDARQLGLKLIANVTFGYTAAN 125
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
+SGRMPC E+ DSIV R TLE+AI VN+ +KW AKV+YGDTD
Sbjct: 126 YSGRMPCVEIGDSIVHKARETLERAIKLVNDTKKWGAKVVYGDTD 170
>gi|66475912|ref|XP_627772.1| DNA polymerase delta catalytic subunit. DNAQ-like 3'-5' exonuclease;
RNAseH fold [Cryptosporidium parvum Iowa II]
gi|32399018|emb|CAD98258.1| DNA polymerase family B subunit, probable [Cryptosporidium parvum]
gi|46229188|gb|EAK90037.1| DNA polymerase delta catalytic subunit. DNAQ-like 3'-5' exonuclease;
RNAseH fold [Cryptosporidium parvum Iowa II]
Length = 1084
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 224/494 (45%), Gaps = 76/494 (15%)
Query: 974 PDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHL 1030
P+P DS I + ++ DS ++ I+ L C S + + VF E +
Sbjct: 312 PEPHKDSVIQISSVVTLLDSPESICNVIFTLKECAS---------VAEAFVFWFESEKDM 362
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEI 1090
+ L + DPD++ G++ + +L ERA + +R ++KI + D+
Sbjct: 363 LLAWKDFLLALDPDVITGYNCINFDMNYLLERAKLFQLNDFFFFTRLA-KTKITSKDTRF 421
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
S R +G + +++ GRI+ ++ +R E KL
Sbjct: 422 SSRA-------------------------FGTHESKLINIEGRILWDILETIRREHKLKS 456
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
Y++ V+ L+ + + + ++ + G R R Y + + L L +M L +
Sbjct: 457 YSLNYVSTNFLKEQKEDVHYSMI-RGLQDGNPETRKRIAIYCLKDSILPLRLMKHLKLFP 515
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLV 1270
E+ARV G +LSRG Q +V S +LR + N+L + N V
Sbjct: 516 NIIEMARVTGTTIDILLSRGQQIKVTSQILRKCKSTNFLMPTVKNQSDGDNQYEGA--TV 573
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLR 1330
+EP GFY DP+ LDF SLYPS+MIA+N+C+ T + P L++
Sbjct: 574 LEPLKGFYKDPISTLDFASLYPSIMIAHNICYSTLI-----------------PPLNLKN 616
Query: 1331 DLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNAR 1390
+D P G +V VRKG+LP ++EE+++ R K+ +++ + L I N R
Sbjct: 617 VPEDLRKTSPTGHSFVLSSVRKGILPLIVEELIAARKKAKKEMEE--ATDPTLISILNGR 674
Query: 1391 QLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK------ 1444
QLALK AN YGYT A G++PC EL+ SI GR+ ++ + +NE K
Sbjct: 675 QLALKTSANSVYGYTGAVAGGQLPCLELSTSITSYGRAMID-----ITKNEVEKIYRKEN 729
Query: 1445 -----AKVIYGDTD 1453
AKV+YGDTD
Sbjct: 730 GYSADAKVVYGDTD 743
Score = 44.7 bits (104), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 21/130 (16%)
Query: 43 EVPVIRVYGSTPAGQKTCLHIHRALPYLY--VPCA------DIPVQLRQ-----EDDGYM 89
E P+I+++GST G ++IH PYLY VP + I Q+ E +
Sbjct: 98 ETPIIQLFGSTSTGITVLINIHCFFPYLYCEVPKSTPPNPEKIKTQIESGLGATEGKNVL 157
Query: 90 HAISLALEKALKVKGSAGSKRQHVHECSL--------VRAKKGGAVFDKSLQPHESHIPF 141
+ L E + KG + + ++ +L R+ D Q +E++IPF
Sbjct: 158 NVQVLKKESIMHYKGDSEIEDSQFYKITLQLPNLVPTCRSMIENGNLDCIPQAYEANIPF 217
Query: 142 LLQFLVDYNL 151
+L++L+D +L
Sbjct: 218 ILRYLIDRDL 227
>gi|340380252|ref|XP_003388637.1| PREDICTED: DNA polymerase delta catalytic subunit-like, partial
[Amphimedon queenslandica]
Length = 777
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 244/543 (44%), Gaps = 78/543 (14%)
Query: 930 GPDGRSKPTPLSQI-------GFQDPASAGAGEQ---LTLLSIEVQAESRGDLRPDPRYD 979
GP G + PT QI F G ++ L +LS +++ R + P+ D
Sbjct: 255 GPPGVTTPTTRCQIELDVSCDDFISHTPEGEWQKIAPLRILSFDIECAGRKGVFPEADVD 314
Query: 980 SINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILC 1039
+ +A + D A I + S S GI V + E L + + L
Sbjct: 315 PVIQIANMIQVQGDPAPFIRNVFTLGSCS------GIVGSDVRSFANEKDLLQSWCEFLQ 368
Query: 1040 SFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNM 1099
DPDIL G++I L +L RA L + + RT
Sbjct: 369 ETDPDILTGYNIVNFDLPYLINRAKALKLQQFPYLGRT---------------------- 406
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
A +++ +G+ +++ GR+ ++ +++ + KL Y++ +V+
Sbjct: 407 ----TSAMTVIKTSTFESKAYGKRENKLINISGRVQFDLLQVLFRDTKLRSYSLNSVSYH 462
Query: 1160 VLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVF 1219
L+ + +P ++T +G +R R Y + A L L ++ +L + E+ARV
Sbjct: 463 FLKEQKEDVPHNIITD-LQNGNEDSRRRLAVYCMKDAILPLRLLEKLMSLINYIEMARVT 521
Query: 1220 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP-LVMEPESGFY 1278
G+ +L+RG Q +V S LLR A + L + S+ E L V+EP+ G+Y
Sbjct: 522 GVPLNYLLTRGQQIKVVSQLLRKAKKHDLLM-----PVIKSESQEEYLGGHVIEPQRGYY 576
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKD--EL 1336
+ P+ VLDF SLYPS+M A+NLC+ T + + +V RD D +
Sbjct: 577 SSPISVLDFSSLYPSIMQAHNLCYTTLILR------------------NVDRDKLDPEDY 618
Query: 1337 LIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKL 1396
+ P+G +V VR+G+LP +LE++LS R KQ +K + ++ + RQLALK+
Sbjct: 619 IKTPSGNYFVKESVRRGILPEILEDLLSARKKAKQELKN--ETDPFRKKVLDGRQLALKV 676
Query: 1397 IANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENE------KWKAKVIYG 1450
AN YG+T A G++PC E++ S+ GR +E + + + KVIYG
Sbjct: 677 SANSVYGFTGATV-GKLPCIEISQSVTSFGRQMIETSQKLIESKYCVANGFPYDTKVIYG 735
Query: 1451 DTD 1453
DTD
Sbjct: 736 DTD 738
Score = 44.3 bits (103), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
D DS +F + + I+ Y++ PI G Y L VPV+++YG T G C H
Sbjct: 64 DPSTDSVVF--QHIDIESYVSSPIRGVS-AYRHLPS-----VPVLKMYGVTQEGFSVCAH 115
Query: 63 IHRALPYLYV 72
+H +PYLYV
Sbjct: 116 VHSFMPYLYV 125
>gi|148690782|gb|EDL22729.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_a
[Mus musculus]
Length = 1127
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 330 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 381
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 382 PILGAKVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQAL------KV 435
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 436 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVISMVGRV 475
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 476 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 534
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A Q L
Sbjct: 535 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMRQGLLMPVVK 594
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 595 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 644
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 645 GAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 689
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 690 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 748
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 749 EKTKQLVESKYTVENGYDANAKVVYGDTD 777
Score = 43.1 bits (100), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 50/197 (25%)
Query: 6 PDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
P + + + IDHY+ APP+P + N VP++R +G T G C HI
Sbjct: 109 PSTEPLIFQQLEIDHYVGSAPPLPEGPL-------PSRNSVPILRAFGVTDEGFSVCCHI 161
Query: 64 HRALPYLYVPC-----ADIPVQLRQEDD------------------------------GY 88
PY Y P A+ +L+QE + GY
Sbjct: 162 QGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRESMFGY 221
Query: 89 M-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLV 147
H S L L + R+ + + VR G S P+E+++ F ++F+V
Sbjct: 222 HGHGPSPFLRITLALPRLMAPARRLLEQG--VRVPGLGT---PSFAPYEANVDFEIRFMV 276
Query: 148 DYNLYGMGHLHLSKLKF 164
D ++ G L L K+
Sbjct: 277 DADIVGCNWLELPAGKY 293
>gi|195477860|ref|XP_002086418.1| GE23127 [Drosophila yakuba]
gi|194186208|gb|EDW99819.1| GE23127 [Drosophila yakuba]
Length = 1092
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 235/514 (45%), Gaps = 70/514 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+ + D + +A V+ + E R++ +
Sbjct: 294 FRILSFDIECAGRKGIFPEAKMDPVIQIANM------------VIRQGEREPFIRNVFTL 341
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C +V KE + + + DPDIL G++I +L RAAHL +
Sbjct: 342 NQCAPIIGSQVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLINRAAHLKVKN 401
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R N+ + V+ E +L + GR ++
Sbjct: 402 FEYLGRI-------------------KNIRS--VIKEQMLQSK-----QMGRRENQYVNF 435
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R
Sbjct: 436 EGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGDEQTRRRLAM 494
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++ +L I E+ARV G+ S+L+RG Q +V S LLR A T+ +
Sbjct: 495 YCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLESLLTRGQQIKVLSQLLRKAKTKGF-- 552
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+
Sbjct: 553 IMPSYTSQGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCY-------- 603
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELL-IPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
TL + R L +L+D+ + P +V +VR+G+LP +LE +L+ R
Sbjct: 604 ----TTLVLGGTREKLREQENLQDDQVERTPANNYFVKSEVRRGLLPEILESLLAARKRA 659
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+
Sbjct: 660 KNDLK--VETDPFKRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTM 716
Query: 1430 LEKAISFVNENEKW------KAKVIYGDTDRYTV 1457
+E + V + A VIYGDTD V
Sbjct: 717 IEMTKNEVESHYTQANGYENNAVVIYGDTDSVMV 750
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 82/204 (40%), Gaps = 46/204 (22%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + +++Y+ P+PG + G ++ VPV+R++G T G C H+H
Sbjct: 71 PSKHNLEFQQLDVENYLGQPLPG-------MPGAQIGPVPVVRMFGVTMEGNSVCCHVHG 123
Query: 66 ALPYLYVPC-----------------ADIPVQLRQEDDGYMHAISLA-LEKALKVKGSAG 107
PY Y+ + +R D A+ + L + L + G G
Sbjct: 124 FCPYFYIEAPRQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHGYNG 183
Query: 108 SKRQHVHECSLV---------RAKKGGAVFD----KSLQPHESHIPFLLQFLVDYNLYG- 153
K+Q + S+ R K + + + E++I F ++F+VD ++ G
Sbjct: 184 DKKQRYIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVVGC 243
Query: 154 ------MGHLHLSKLKFRHPVPDA 171
MGH + P+P++
Sbjct: 244 NWIELPMGHWRIRN-SHSKPLPES 266
>gi|148690786|gb|EDL22733.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_e
[Mus musculus]
Length = 1105
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 308 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 359
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 360 PILGAKVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQAL------KV 413
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 414 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVISMVGRV 453
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 454 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 512
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A Q L
Sbjct: 513 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMRQGLLMPVVK 572
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 573 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 622
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 623 GAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 667
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 668 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 726
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 727 EKTKQLVESKYTVENGYDANAKVVYGDTD 755
Score = 43.1 bits (100), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 50/197 (25%)
Query: 6 PDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
P + + + IDHY+ APP+P + N VP++R +G T G C HI
Sbjct: 87 PSTEPLIFQQLEIDHYVGSAPPLPEGPL-------PSRNSVPILRAFGVTDEGFSVCCHI 139
Query: 64 HRALPYLYVPC-----ADIPVQLRQEDD------------------------------GY 88
PY Y P A+ +L+QE + GY
Sbjct: 140 QGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRESMFGY 199
Query: 89 M-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLV 147
H S L L + R+ + + VR G S P+E+++ F ++F+V
Sbjct: 200 HGHGPSPFLRITLALPRLMAPARRLLEQG--VRVPGLGT---PSFAPYEANVDFEIRFMV 254
Query: 148 DYNLYGMGHLHLSKLKF 164
D ++ G L L K+
Sbjct: 255 DADIVGCNWLELPAGKY 271
>gi|195590609|ref|XP_002085037.1| GD12524 [Drosophila simulans]
gi|194197046|gb|EDX10622.1| GD12524 [Drosophila simulans]
Length = 1096
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 236/514 (45%), Gaps = 70/514 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+ + D + +A V+ + E R++ +
Sbjct: 294 FRILSFDIECAGRKGIFPEAKMDPVIQIANM------------VIRQGEREPFIRNVFTL 341
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
+C +V KE + + + DPDIL G++I +L RAAHL +
Sbjct: 342 NECAPIIGSQVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLINRAAHLKVRN 401
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R N+ + V+ E +L + GR ++
Sbjct: 402 FEYLGRI-------------------KNIRS--VIKEQMLQSK-----QMGRRENQYVNF 435
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R
Sbjct: 436 EGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGDEQTRRRLAM 494
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++ +L I E+ARV G+ S+L+RG Q +V S LLR A T+ +
Sbjct: 495 YCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLESLLTRGQQIKVLSQLLRKAKTKGF-- 552
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+
Sbjct: 553 IMPSYTSQGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCY-------- 603
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELL-IPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
TL + R L +L+D+ + P +V +VR+G+LP +LE +L+ R
Sbjct: 604 ----TTLVLGGTREKLRQQENLQDDQVERTPANNYFVKSEVRRGLLPEILESLLAARKRA 659
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+
Sbjct: 660 KNDLK--VETDPFKRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTM 716
Query: 1430 LEKAISFVNENEKW------KAKVIYGDTDRYTV 1457
+E + V + A VIYGDTD V
Sbjct: 717 IELTKNEVESHYTQANGYENNAVVIYGDTDSVMV 750
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 114/298 (38%), Gaps = 61/298 (20%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + +++Y+ P+PG + G ++ VPV+R++G T G C H+H
Sbjct: 71 PSKHNLEFQQLDVENYLGQPLPG-------MPGAQIGPVPVVRMFGVTMEGNSVCCHVHG 123
Query: 66 ALPYLYVPCAD-----------------IPVQLRQEDDGYMHAISLA-LEKALKVKGSAG 107
PY Y+ + + +R D A+ + L + L + G G
Sbjct: 124 FCPYFYIEAPNQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHGYNG 183
Query: 108 SKRQHVHECSLV---------RAKKGGAVFD----KSLQPHESHIPFLLQFLVDYNLYG- 153
K+Q + S+ R K + + + E++I F ++F+VD ++ G
Sbjct: 184 DKKQRYIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVVGC 243
Query: 154 ------MGHLHLSKLKFRHPVP--------DAFFPRKFNYSSKQASADFQVIGCGSYPMH 199
MGH + P+P D F R + S + ++ + P
Sbjct: 244 NWIELPMGHWRIRN-SHSKPLPESRCQIEVDVAFDR---FISHEPEGEWSKVA----PFR 295
Query: 200 LMGHQIKTLSGLNIKVFLSLKEMLQWMVCLIHCSATDIFASSIFLYDDCVGDIVNQRL 257
++ I+ I + ++Q +I + F ++F ++C I +Q L
Sbjct: 296 ILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQGEREPFIRNVFTLNECAPIIGSQVL 353
>gi|148690785|gb|EDL22732.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_d
[Mus musculus]
Length = 1101
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 308 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 359
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 360 PILGAKVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQAL------KV 413
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 414 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVISMVGRV 453
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 454 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 512
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A Q L
Sbjct: 513 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMRQGLLMPVVK 572
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 573 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 622
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 623 GAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 667
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 668 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 726
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 727 EKTKQLVESKYTVENGYDANAKVVYGDTD 755
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 50/197 (25%)
Query: 6 PDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
P + + + IDHY+ APP+P + N VP++R +G T G C HI
Sbjct: 87 PSTEPLIFQQLEIDHYVGSAPPLPEGPL-------PSRNSVPILRAFGVTDEGFSVCCHI 139
Query: 64 HRALPYLYVPC-----ADIPVQLRQEDD------------------------------GY 88
PY Y P A+ +L+QE + GY
Sbjct: 140 QGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRESMFGY 199
Query: 89 M-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLV 147
H S L L + R+ + + VR G S P+E+++ F ++F+V
Sbjct: 200 HGHGPSPFLRITLALPRLMAPARRLLEQG--VRVPGLGT---PSFAPYEANVDFEIRFMV 254
Query: 148 DYNLYGMGHLHLSKLKF 164
D ++ G L L K+
Sbjct: 255 DADIVGCNWLELPAGKY 271
>gi|438134|emb|CAA79895.1| DNA-directed DNA polymerase [Mus musculus]
Length = 1105
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 308 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 359
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 360 PILGAKVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQAL------KV 413
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 414 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVISMVGRV 453
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 454 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 512
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A Q L
Sbjct: 513 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMRQGLLMPVVK 572
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 573 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR---P 622
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 623 GAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 667
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 668 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 726
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 727 EKTKQLVESKYTVENGYDANAKVVYGDTD 755
Score = 43.5 bits (101), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 50/197 (25%)
Query: 6 PDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
P + + + IDHY+ APP+P + N VP++R +G T G C HI
Sbjct: 87 PSTEPLIFQQLEIDHYVGSAPPLPERPL-------PSRNSVPILRAFGVTDEGFSVCCHI 139
Query: 64 HRALPYLYVPC-----ADIPVQLRQEDD------------------------------GY 88
PY Y P A+ +L+QE + GY
Sbjct: 140 QGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRESMFGY 199
Query: 89 M-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLV 147
H S L L + R+ + + VR G S P+E+++ F ++F+V
Sbjct: 200 HGHGPSPFLRITLALPRLMAPARRLLEQG--VRVPGLGT---PSFAPYEANVDFEIRFMV 254
Query: 148 DYNLYGMGHLHLSKLKF 164
D ++ G L L K+
Sbjct: 255 DADIVGCNWLELPAGKY 271
>gi|109125666|ref|XP_001116065.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 2 [Macaca
mulatta]
Length = 1327
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 236/512 (46%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+++ DPD++ G++IQ L +L RA L +
Sbjct: 362 PILGAKVQSYEKEEDLLQAWSTFIRVM---DPDVITGYNIQNFDLPYLISRAQTLKVQTF 418
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
P ++A S I + + GR + +
Sbjct: 419 ------PFLGRVAGLRSNIRDSSFQSK--------------------QTGRRDTKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 512 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMP 571
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 572 VVRSEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL-- 622
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 623 -RPGAAQKLGLT------------EDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR-- 667
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 668 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGR 725
Query: 1428 STLEKAISFVNENEKWK------AKVIYGDTD 1453
+EK V + AKV+YGDTD
Sbjct: 726 QMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 757
Score = 47.0 bits (110), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 77/200 (38%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG L G V PV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPAQPVPGG----PPLSRGSV---PVLRAFGVTDEGVSVC 138
Query: 61 LHIHRALPYLYVPC---------------------------------ADIPVQL--RQED 85
HIH PY Y P A + V+L R+
Sbjct: 139 CHIHGFAPYFYTPAPPGFEPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRESM 198
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L L + R+ + + V + S P+E+++ F ++
Sbjct: 199 FGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRV-----AGLGTPSFAPYEANVDFEIR 253
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 254 FMVDTDIVGCNWLELPAGKY 273
>gi|170067371|ref|XP_001868453.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
gi|167863529|gb|EDS26912.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
Length = 1100
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 228/513 (44%), Gaps = 71/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+P++D + +A D E R++ +
Sbjct: 305 FRILSFDIECAGRKGIFPEPQHDPVIQIANMVIRQGDQ------------EPFLRNVFTL 352
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C V S+ E L + + DPDIL G++I + +L RA HL +
Sbjct: 353 KSCAPIVGSQVLSYESEQELLDKWASFVRELDPDILTGYNINNFDIPYLLNRANHLKVKN 412
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R +T+ S++ + I + GR ++
Sbjct: 413 FEYLGR------------------VTN--------IRSVIKETVIQSKQMGRRENKSVNF 446
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ AV+ L+ + + ++T + + R R
Sbjct: 447 EGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNENEQTRRRLAM 505
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++N+L I E+ARV G+ +L+RG Q +V S LLR YL
Sbjct: 506 YCLKDAYLPLRLLNKLMCIVNYMEMARVTGVPLQCLLTRGQQIKVMSQLLRKTRKCGYLI 565
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
P S E V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 566 --PSYQSSGSDEQYEG-ATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLLQPGF 622
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
+ LG++ D++ P +V VRKG+LP +LE +L R K
Sbjct: 623 --NKEKLGLTD------------DQITRTPANNTFVKASVRKGILPEILESLLGARKRAK 668
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+K + + + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +
Sbjct: 669 ADLK--VETDPFKRSVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMI 725
Query: 1431 EKAISFVNENEKWK------AKVIYGDTDRYTV 1457
E+ V + + A VIYGDTD V
Sbjct: 726 EQTKQEVEQRYTAENGYENDAVVIYGDTDSVMV 758
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 38/191 (19%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P++ + + IDHY+ P+PG + G ++ VPV+R++G T G C H+H
Sbjct: 82 PEAEGLVFQQIDIDHYIGQPVPG-------MPGAQIGPVPVMRMFGITQEGNSVCAHVHG 134
Query: 66 ALPYLYVPC-----------------ADIPVQLRQEDDGYMHAI-SLALEKALKVKGSAG 107
PYLYV + +R + A+ + L + + G G
Sbjct: 135 FTPYLYVAAPRGFGKSHLAEFRTALDKSVLNDMRSNKENVQEAVLDVELVERQSIMGYNG 194
Query: 108 SKRQHVHECSLVRAKKGGAVF----DKSLQP---------HESHIPFLLQFLVDYNLYGM 154
++ S+ + AV + + P +ES+I F ++F+VD N+ G
Sbjct: 195 EEKFSFIRVSVALPRLLAAVKRLLEKEQMMPSMDFQDCRVYESNIDFDIRFMVDTNVVGC 254
Query: 155 GHLHLSKLKFR 165
+ + + K+R
Sbjct: 255 SWIEIPQGKWR 265
>gi|3122029|sp|P97283.1|DPOD1_MESAU RecName: Full=DNA polymerase delta catalytic subunit
gi|1840089|gb|AAB47254.1| DNA polymerase delta catalytic subunit [Mesocricetus auratus]
Length = 1103
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 306 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 357
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 358 PILGAKVQSYEREEDLLQAWPNFILAMDPDVITGYNIQNFDLPYLISRAQTL------KV 411
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 412 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVVSMVGRV 451
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 452 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLR 510
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A Q L
Sbjct: 511 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMRQGLLMPVVK 570
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 571 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 620
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 621 GAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 665
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 666 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAEV-GKLPCLEISQSVTGFGRQMI 724
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 725 EKTKQLVESKYTLENGYNANAKVVYGDTD 753
Score = 47.0 bits (110), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 75/198 (37%), Gaps = 52/198 (26%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGG---KVNEVPVIRVYGSTPAGQKTCLH 62
P++ + + IDHY+ +P L GG N VP++R +G T G C H
Sbjct: 85 PNTEPLIFQQLEIDHYVGSAVP--------LPGGPPTSCNSVPILRAFGVTDEGFSVCCH 136
Query: 63 IHRALPYLYVPC---------------------------------ADIPVQL--RQEDDG 87
IH PY Y P A + ++L R+ G
Sbjct: 137 IHGFAPYFYTPAPPGFGAEHLSDLQRELSTAISRDQRGGKELSGPAVLAIELCSRESMFG 196
Query: 88 YM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFL 146
Y H S L L + R+ + + +R G S P+E+++ F ++F+
Sbjct: 197 YHGHGPSPFLRITLALPRLVAPARRLLEQG--IRVPGLGT---PSFAPYEANVDFEIRFM 251
Query: 147 VDYNLYGMGHLHLSKLKF 164
VD ++ G L L K+
Sbjct: 252 VDADIVGCNWLELPAGKY 269
>gi|19112916|ref|NP_596124.1| DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces
pombe 972h-]
gi|12644199|sp|P30316.2|DPOD_SCHPO RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|6048293|emb|CAB58156.1| DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces
pombe]
Length = 1086
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 145/507 (28%), Positives = 238/507 (46%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L ++S +++ R + PDP D + +A D + ++C Q +VG
Sbjct: 294 LRIMSFDIECAGRKGVFPDPSIDPVIQIASIVTQYGD-STPFVRNVFCVDTCSQ--IVG- 349
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V+ + + S + K + DPD+L+G++I + +L +RA L I
Sbjct: 350 --TQVYEFQNQAEMLSSWSKFVRDVDPDVLIGYNICNFDIPYLLDRAKSL------RIHN 401
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
PL +I N + V E+ + A +G + + GR+ L
Sbjct: 402 FPLLGRI-------------HNFFS--VAKETTFSSKA-----YGTRESKTTSIPGRLQL 441
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ + KL Y++ AV L + + + ++T +G +R R Y + A
Sbjct: 442 DMLQVMQRDFKLRSYSLNAVCSQFLGEQKEDVHYSIITD-LQNGTADSRRRLAIYCLKDA 500
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +L+RG Q +V S L R A Q+ L + N
Sbjct: 501 YLPQRLMDKLMCFVNYTEMARVTGVPFNFLLARGQQIKVISQLFRKA-LQHDLVVP--NI 557
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+V V+EP G+Y P+ LDF SLYPS+M A+NLC+ T L NT
Sbjct: 558 RVNGTDEQYEGATVIEPIKGYYDTPIATLDFSSLYPSIMQAHNLCYTTLL------DSNT 611
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ + D+ + + PNG +V P VRKG+LP +L ++L+ R K +KK
Sbjct: 612 AELLKLKQDV--------DYSVTPNGDYFVKPHVRKGLLPIILADLLNARKKAKADLKK- 662
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ + + RQLALK+ AN YG+T A +GR+PC ++ S+ GR +EK
Sbjct: 663 -ETDPFKKAVLDGRQLALKVSANSVYGFTGAT-NGRLPCLAISSSVTSYGRQMIEKTKDV 720
Query: 1437 VNENEKWK------AKVIYGDTDRYTV 1457
V + + + A VIYGDTD V
Sbjct: 721 VEKRYRIENGYSHDAVVIYGDTDSVMV 747
>gi|296234423|ref|XP_002762441.1| PREDICTED: DNA polymerase delta catalytic subunit [Callithrix
jacchus]
Length = 1107
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV KE L + + DPD++ G++IQ L FL RA L +
Sbjct: 362 PILGAKVQSYEKEEDLLQAWATFVRIMDPDVITGYNIQNFDLPFLISRAQTLKVHTF--- 418
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
P ++A S I + + GR + + GR+
Sbjct: 419 ---PFLGRVAGLRSNIRDSSFQSK--------------------QTGRRDTKVVSMVGRV 455
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 456 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVYCLK 514
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 515 DAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAKQEGLLMPVVR 574
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 575 SEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 624
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG++ +D+ + P G +V VRKG+LP++LE +LS R K+
Sbjct: 625 GAAQKLGLT------------EDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR---KR 669
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 670 AKAELARETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 728
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 729 EKTKQLVESKYTVENGYSTSAKVVYGDTD 757
Score = 44.3 bits (103), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 75/201 (37%), Gaps = 54/201 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGG---KVNEVPVIRVYGSTPAGQKT 59
D Q + IF + + IDHY+ P S+ GG VPV+R +G T G
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPA--------QSVPGGPPLSRGSVPVLRAFGVTDEGVSV 137
Query: 60 CLHIHRALPYLYVPC---------------------------------ADIPVQL--RQE 84
C H+H PY Y P A + V+L R+
Sbjct: 138 CCHVHGFAPYFYTPAPPGFGPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRES 197
Query: 85 DDGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLL 143
GY H S L L + R+ + + V + S P+E+++ F +
Sbjct: 198 IFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRV-----AGLGTPSFAPYEANVDFEI 252
Query: 144 QFLVDYNLYGMGHLHLSKLKF 164
+F+VD ++ G L L K+
Sbjct: 253 RFMVDTDIVGCNWLELPAGKY 273
>gi|26353290|dbj|BAC40275.1| unnamed protein product [Mus musculus]
Length = 1105
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 308 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 359
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 360 PILGAKVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQAL------KV 413
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 414 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVISMVGRV 453
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 454 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 512
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A Q L
Sbjct: 513 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMRQGLLMPVVK 572
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 573 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 622
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 623 GAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 667
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 668 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 726
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 727 EKTKQLVESKYTVENGYDANAKVVYGDTD 755
>gi|27806073|ref|NP_776852.1| DNA polymerase delta catalytic subunit [Bos taurus]
gi|118838|sp|P28339.1|DPOD1_BOVIN RecName: Full=DNA polymerase delta catalytic subunit
gi|162974|gb|AAA30493.1| DNA polymerase-delta catalytic-subunit [Bos taurus]
Length = 1106
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 238/512 (46%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 309 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 360
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV +E + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 361 PILGAKVQSYEREEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 412
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ PL ++ S I E + GR + + +
Sbjct: 413 -KVPGFPLLGRVIGLRSNIRESSFQSR--------------------QTGRRDSKVVSMV 451
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 452 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 510
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A Q L
Sbjct: 511 CLKDAFLPLRLLERLMVLVNAMEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMRQGLLMP 570
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 571 VVKTEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL-- 621
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 622 -RPGAAQKLGLT------------EDQFIKTPTGDEFVKASVRKGLLPQILENLLSAR-- 666
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A GR+PC E++ S+ GR
Sbjct: 667 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GRLPCLEISQSVTGFGR 724
Query: 1428 STLEKAISFVN-----EN-EKWKAKVIYGDTD 1453
+EK V EN AKV+YGDTD
Sbjct: 725 QMIEKTKQLVETKYTVENGYSTSAKVVYGDTD 756
Score = 45.8 bits (107), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 76/200 (38%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + IDHY+AP P+PG + VP++R +G T G C
Sbjct: 87 DPQMEPLIFQQ--LEIDHYVAPARPLPGAP-------PPSQDSVPILRAFGVTNEGVSVC 137
Query: 61 LHIHRALPYLYVPC---------------------------------ADIPVQL--RQED 85
HIH PY Y P A + V+L R+
Sbjct: 138 CHIHGFAPYFYTPAPPGFGPEHLSELQRELSAAISRDQRGGKELTGPAVLAVELCSRESM 197
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L L + R+ + + + + S P+E+++ F ++
Sbjct: 198 FGYHGHGPSPFLRITLALPRLMAPARRLLEQ-----GIRLAGLGTPSFAPYEANVDFEIR 252
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 253 FMVDTDIVGCNWLELPAGKY 272
>gi|221053875|ref|XP_002261685.1| dna polymerase delta catalytic subunit [Plasmodium knowlesi strain H]
gi|193808145|emb|CAQ38848.1| dna polymerase delta catalytic subunit,putative [Plasmodium knowlesi
strain H]
Length = 1096
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 204/448 (45%), Gaps = 57/448 (12%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
IP V E L + + + DPD L G++I L ++ R L + L +
Sbjct: 358 SIPGSNVIWFHDEKTLLDAWNEFITRLDPDFLTGYNIINFDLPYILNRGTALNLKKLKML 417
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R S + DS S + ++G +++ GRI
Sbjct: 418 GRIKNISSVVK-DSNFSSK-------------------------QFGNHETKEININGRI 451
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+V+ L+R + KL YT+ V+ L+ + + + ++ P +R R Y +
Sbjct: 452 QFDVYDLIRRDYKLKSYTLNYVSFEFLKEQKEDVHYSIMNDLQNESP-ESRKRIATYCIK 510
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
L L ++++L I E+ARV G F +L+RG Q +V S L R NY + P
Sbjct: 511 DGILPLRLIDKLLFIYNYVEMARVTGTPFVYLLTRGQQIKVTSQLYRKCKELNY--VIPS 568
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ + V+EP G+Y +P+ LDF SLYPS+MIA+NLC+ T + K
Sbjct: 569 TYIKSGSNEKYEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLV------KN 622
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
N+ + D+ ++ + + +V V+KG+LP ++EE++ R VK IK
Sbjct: 623 NSEIEGLEQEDITSIQG--------KSNIKFVKKSVKKGILPMIVEELIDARKKVKLLIK 674
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
+I + N RQLALK+ AN YGYT A G++PC E+A SI GRS ++K
Sbjct: 675 N--EKNKITKMVLNGRQLALKISANSVYGYTGAASGGQLPCLEVAVSITTLGRSMIDKTK 732
Query: 1435 SFVNENEKWKAK---------VIYGDTD 1453
V EK+ K V+YGDTD
Sbjct: 733 ESV---EKYYNKSNGFEHNCTVVYGDTD 757
>gi|296477407|tpg|DAA19522.1| TPA: DNA polymerase delta catalytic subunit [Bos taurus]
Length = 987
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 238/512 (46%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 309 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 360
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV +E + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 361 PILGAKVQSYEREEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 412
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ PL ++ S I E + GR + + +
Sbjct: 413 -KVPGFPLLGRVIGLRSNIRESSFQSR--------------------QTGRRDSKVVSMV 451
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 452 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 510
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A Q L
Sbjct: 511 CLKDAFLPLRLLERLMVLVNAMEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMRQGLLMP 570
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 571 VVKTEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR- 622
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 623 --PGAAQKLGLT------------EDQFIKTPTGDEFVKASVRKGLLPQILENLLSAR-- 666
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A GR+PC E++ S+ GR
Sbjct: 667 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GRLPCLEISQSVTGFGR 724
Query: 1428 STLEKAISFVN-----EN-EKWKAKVIYGDTD 1453
+EK V EN AKV+YGDTD
Sbjct: 725 QMIEKTKQLVETKYTVENGYSTSAKVVYGDTD 756
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+AP P+PG + VP++R +G T G C
Sbjct: 87 DPQMEPLIF--QQLEIDHYVAPARPLPGAPPPSQ-------DSVPILRAFGVTNEGVSVC 137
Query: 61 LHIHRALPYLYVPC---------------------------------ADIPVQL--RQED 85
HIH PY Y P A + V+L R+
Sbjct: 138 CHIHGFAPYFYTPAPPGFGPEHLSELQRELSAAISRDQRGGKELTGPAVLAVELCSRESM 197
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L L + R+ + + +R G S P+E+++ F ++
Sbjct: 198 FGYHGHGPSPFLRITLALPRLMAPARRLLEQG--IRLAGLGT---PSFAPYEANVDFEIR 252
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 253 FMVDTDIVGCNWLELPAGKY 272
>gi|410258776|gb|JAA17355.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Pan
troglodytes]
gi|410333287|gb|JAA35590.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Pan
troglodytes]
Length = 1107
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 236/512 (46%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+I+ DPD++ G++IQ L +L RA L +
Sbjct: 362 PILGAKVQSYEKEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTLKVQTF 418
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
P ++A S I + + GR + +
Sbjct: 419 ------PFLGRVAGLRSNIRDSSFQSK--------------------QTGRRDTKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 512 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMP 571
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 572 VVKSEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL-- 622
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 623 -RPGTAQKLGLT------------EDQFIRTPTGDEFVKTSVRKGLLPQILENLLSAR-- 667
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 668 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGR 725
Query: 1428 STLEKAISFVNENEKWK------AKVIYGDTD 1453
+EK V + AKV+YGDTD
Sbjct: 726 QMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 757
Score = 44.3 bits (103), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG VPV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPAQPVPGGP-------PPSRGSVPVLRAFGVTDEGFSVC 138
Query: 61 LHIHRALPYLYVP 73
HIH PY Y P
Sbjct: 139 CHIHGFAPYFYTP 151
>gi|254577417|ref|XP_002494695.1| ZYRO0A07524p [Zygosaccharomyces rouxii]
gi|238937584|emb|CAR25762.1| ZYRO0A07524p [Zygosaccharomyces rouxii]
Length = 1090
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 231/511 (45%), Gaps = 67/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P D + NV+++A ++ + C
Sbjct: 308 LRILSFDIECSGRPGIFPEPETDPVIQIANVMSVAGAKKP-FIRNVFTVDTCSP------ 360
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +++ + E + H+ + + DPDI++G++ +L RA L
Sbjct: 361 ---ITGSQIYSHATEEEMLKHWRDFVVAADPDIIIGYNTSNFDFPYLINRAKAL------ 411
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ P ++ EI+ S+ + A +G + +++ G
Sbjct: 412 KVESFPYFGRLFNVKQEITS---------------SVFSSKA-----YGTKESKNINIDG 451
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + ++T G R R Y
Sbjct: 452 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHHSIITS-LQKGDSETRRRLAVYC 510
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E+ARV G+ F +LSRG Q +V S L R + +
Sbjct: 511 LKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLSRGQQIKVISQLFRKCLQID--TVI 568
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P AS E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 569 PNMQSQASDEQYEG-ATVIEPIRGYYDIPIATLDFSSLYPSIMMAHNLCYTTLTSKSTVE 627
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
K N L ++ ++ PNG +V KVR+G+LP +LEE++ R K+
Sbjct: 628 KFNM--------------KLDEDYIMTPNGDYFVTSKVRRGILPTILEELIGARKRAKKD 673
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K ++ + N RQLALK+ AN YG+T A G++PC ++ S+ GR+ +
Sbjct: 674 LKN--ETEPFRKDVLNGRQLALKVSANSVYGFTGATV-GKLPCLAISSSVTSFGRNMIML 730
Query: 1433 AISFVNENEKWK------AKVIYGDTDRYTV 1457
V E K + V+YGDTD V
Sbjct: 731 TKQAVEEKYSIKNGFKHDSLVVYGDTDSVMV 761
>gi|14318657|gb|AAH09128.1| Polymerase (DNA directed), delta 1, catalytic subunit [Mus musculus]
gi|30962877|gb|AAH52670.1| Polymerase (DNA directed), delta 1, catalytic subunit [Mus musculus]
Length = 1105
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 308 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 359
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 360 PILGAKVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQAL------KV 413
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 414 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVISMVGRV 453
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 454 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 512
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A Q L
Sbjct: 513 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMRQGLLMPVVK 572
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 573 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 622
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 623 GAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 667
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 668 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 726
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 727 EKTKQLVESKYTVENGYDANAKVVYGDTD 755
>gi|397485032|ref|XP_003813667.1| PREDICTED: DNA polymerase delta catalytic subunit [Pan paniscus]
Length = 1107
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 236/512 (46%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 362 PILGAKVQSYEKEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 413
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P ++A S I + + GR + +
Sbjct: 414 -KVQTFPFLGRVAGLRSNIRDSSFQSK--------------------QTGRRDTKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 512 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMP 571
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 572 VVKSEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL-- 622
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 623 -RPGTAQKLGLT------------EDQFIRTPTGDEFVKTSVRKGLLPQILENLLSAR-- 667
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 668 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGR 725
Query: 1428 STLEKAISFVNENEKWK------AKVIYGDTD 1453
+EK V + AKV+YGDTD
Sbjct: 726 QMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 757
Score = 44.3 bits (103), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG VPV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPAQPVPGGP-------PPSRGSVPVLRAFGVTDEGFSVC 138
Query: 61 LHIHRALPYLYVP 73
HIH PY Y P
Sbjct: 139 CHIHGFAPYFYTP 151
>gi|2827903|gb|AAB99910.1| DNA polymerase delta catalytic subunit [Mus musculus]
Length = 1105
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 308 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 359
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 360 PILGAKVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQAL------KV 413
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 414 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVISMVGRV 453
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 454 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 512
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A Q L
Sbjct: 513 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMRQGLLMPVVK 572
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 573 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 622
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 623 GAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 667
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 668 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 726
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 727 EKTKQLVESKYTVENGYDANAKVVYGDTD 755
>gi|242060584|ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
gi|241931412|gb|EES04557.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
Length = 1101
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 146/507 (28%), Positives = 246/507 (48%), Gaps = 63/507 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R P+P +D + +A + + + ++ KS S +VG+ D
Sbjct: 312 ILSFDIECAGRKGHFPEPTHDPVIQIANLVTHQGEGQPFVQNVMTLKSCS---PIVGV-D 367
Query: 1019 CKVFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRT 1077
F ++I L + +FI+ DPDI++G++I + +L ERA L I + R
Sbjct: 368 VMSFDAERDILLAWRNFIR---EVDPDIIIGYNICKFDMPYLIERAEVLKIAEFPILGRI 424
Query: 1078 PLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLN 1137
S++ D+ S R ++G + + + GR+ +
Sbjct: 425 R-NSRVRVRDTTFSSR-------------------------QYGVRESKDVTIEGRVQFD 458
Query: 1138 VWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAK 1197
+ + M+ + KL+ Y++ +V+ L + + +++ +G R R Y + A
Sbjct: 459 LLQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISD-LQNGNPETRRRLAVYCLKDAY 517
Query: 1198 LNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQ 1257
L ++++L I E+ARV G+ +LSRG +V S LLR A +N L I Q
Sbjct: 518 LPQRLLDKLLYIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN-LVIPNIKGQ 576
Query: 1258 VASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTL 1317
+ Q E V+E +GFY P+ LDF SLYPS+M+AYNLC+CT ++P +
Sbjct: 577 GSGQDTFEG-ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCT----LVPPE---- 627
Query: 1318 GVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA 1377
D L + + P+G ++V P+++KG+LP +LEE+L+ R K+A L
Sbjct: 628 -------DARKLNLPPESINKTPSGEIFVKPELQKGILPEILEELLAAR---KRAKADLK 677
Query: 1378 PSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
++ L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 678 EAKDPLERAVLDGRQLALKISANSVYGFTGATV-GQLPCLEISSSVTSYGRQMIEHTKKL 736
Query: 1437 VNEN------EKWKAKVIYGDTDRYTV 1457
V + + A+VIYGDTD V
Sbjct: 737 VEDKFTTVGGYEHNAEVIYGDTDSVMV 763
>gi|50293371|ref|XP_449097.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528410|emb|CAG62067.1| unnamed protein product [Candida glabrata]
Length = 1096
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 228/512 (44%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P +D + NVV E ++ L C
Sbjct: 314 LRILSFDIECAGRPGIFPEPEHDRVIQIANVVNTVGEKKP-FIRNVFTLDTCAP------ 366
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +VF E L + + DPD+++G++ + +L RA L
Sbjct: 367 ---ITGSQVFDNETEEDLLRKWRDFIIQVDPDVIIGYNTTNFDIPYLLNRAKAL------ 417
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
I P ++ EI E S+ + A +G +++ G
Sbjct: 418 KIENFPYFGRLKNVKQEIKE---------------SIFSSKA-----YGTRETKNVNIDG 457
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + ++T +G R R Y
Sbjct: 458 RLQLDLLQFVQREYKLRSYTLNAVSANFLGEQKEDVHHSIITD-LQNGDRETRRRLAVYC 516
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++ +L + +E+ARV GI F +L+RG Q +V S L R + +
Sbjct: 517 LKDAYLPLRLLEKLMALVNYTEMARVTGIPFSYLLARGQQIKVVSQLFRKCLEID--TVI 574
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P H S E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 575 PNMHSHGSDEQYEG-ATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVD 633
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ N +++ +I PNG +V K R+G+LP +L+E++S R K+A
Sbjct: 634 RLNL--------------KKEEDYIITPNGDYFVTTKKRRGILPIILDELISAR---KRA 676
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K L R + N RQLALK+ AN YG+T A G++PC ++ S+ GR +
Sbjct: 677 KKDLRDETDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTSFGRVMIM 735
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+ V E K A VIYGDTD V
Sbjct: 736 ETKKAVEEKYSIKNGAKHDAVVIYGDTDSVMV 767
>gi|402906428|ref|XP_003916004.1| PREDICTED: DNA polymerase delta catalytic subunit [Papio anubis]
Length = 1107
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 236/512 (46%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+++ DPD++ G++IQ L +L RA L
Sbjct: 362 PILGAKVQSYEKEEDLLQAWSTFIRVM---DPDVITGYNIQNFDLPYLISRAQTL----- 413
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P ++A S I + + GR + +
Sbjct: 414 -KVETFPFLGRVAGLRSNIRDSSFQSK--------------------QTGRRDTKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 512 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMP 571
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 572 VVRSEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR- 623
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 624 --PGAAQKLGLT------------EDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR-- 667
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 668 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGR 725
Query: 1428 STLEKAISFVNENEKWK------AKVIYGDTD 1453
+EK V + AKV+YGDTD
Sbjct: 726 QMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 757
Score = 47.0 bits (110), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 77/200 (38%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG L G V PV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPAQPVPGG----PPLSRGSV---PVLRAFGVTDEGVSVC 138
Query: 61 LHIHRALPYLYVPC---------------------------------ADIPVQL--RQED 85
HIH PY Y P A + V+L R+
Sbjct: 139 CHIHGFAPYFYTPAPPGFKPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRESM 198
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L L + R+ + + V + S P+E+++ F ++
Sbjct: 199 FGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRV-----AGLGTPSFAPYEANVDFEIR 253
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 254 FMVDTDIVGCNWLELPAGKY 273
>gi|148690787|gb|EDL22734.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_f
[Mus musculus]
Length = 964
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 308 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 359
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 360 PILGAKVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQAL------KV 413
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 414 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVISMVGRV 453
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 454 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 512
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A Q L
Sbjct: 513 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMRQGLLMPVVK 572
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 573 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 622
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 623 GAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 667
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 668 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 726
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 727 EKTKQLVESKYTVENGYDANAKVVYGDTD 755
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 50/197 (25%)
Query: 6 PDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
P + + + IDHY+ APP+P + N VP++R +G T G C HI
Sbjct: 87 PSTEPLIFQQLEIDHYVGSAPPLPEGPLPSR-------NSVPILRAFGVTDEGFSVCCHI 139
Query: 64 HRALPYLYVPC-----ADIPVQLRQEDD------------------------------GY 88
PY Y P A+ +L+QE + GY
Sbjct: 140 QGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRESMFGY 199
Query: 89 M-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLV 147
H S L L + R+ + + VR G S P+E+++ F ++F+V
Sbjct: 200 HGHGPSPFLRITLALPRLMAPARRLLEQG--VRVPGLGT---PSFAPYEANVDFEIRFMV 254
Query: 148 DYNLYGMGHLHLSKLKF 164
D ++ G L L K+
Sbjct: 255 DADIVGCNWLELPAGKY 271
>gi|209882407|ref|XP_002142640.1| DNA polymerase family B [Cryptosporidium muris RN66]
gi|209558246|gb|EEA08291.1| DNA polymerase family B, putative [Cryptosporidium muris RN66]
Length = 1123
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 240/522 (45%), Gaps = 71/522 (13%)
Query: 951 AGAGEQLT-----LLSIEVQ-AESRGDLRPDPRYD-SINVVALAFENDSDHAVEIYVLLY 1003
+ +GE LT +LS +++ ++ G P+P D I + ++ DS+ +
Sbjct: 321 SSSGEWLTPPPVRILSFDIECVKNIGTGFPEPEKDPVIQISSVVTYLDSEEPI------- 373
Query: 1004 CKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA 1063
C + + V E L + + + S DPDIL G++ + +L ERA
Sbjct: 374 CNIIFTLKECAAVAGAFVLWFDNEQDLLLAWREFIISIDPDILTGYNCINFDMFYLFERA 433
Query: 1064 AHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRT 1123
G+ +SR IT + V+ + + A +G
Sbjct: 434 KIFGLKNFFYLSR------------------ITS---TKSVIKSTRFSSKA-----FGIH 467
Query: 1124 HASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGR 1183
+ ++ GRI ++ +R E KL YT+ V+ T L+ + + + ++ G
Sbjct: 468 DSKSFNIEGRIFWDLLESIRREYKLKSYTLNYVSTTFLKEQKEDVHYSMIHS-LQEGTPE 526
Query: 1184 ARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLA 1243
R R Y + + L L +M L + E+ARV G +LSRG Q +V S +LR
Sbjct: 527 TRKRIAVYCLKDSLLPLRLMKHLKLFPNIIEMARVTGTTLDILLSRGQQIKVTSQILRKC 586
Query: 1244 HTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFC 1303
+ N++ + + + E V+EP GFY DP+ LDF SLYPS+MIA+N+C+
Sbjct: 587 KSLNFIMPTLKRSGESVEDQYEG-ATVLEPVKGFYKDPISTLDFASLYPSIMIAHNICYS 645
Query: 1304 TCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEIL 1363
T ++PS + H+ D K + P G +V VRKG+LP ++EE++
Sbjct: 646 T----LVPSNDAD----------HLSDDFKRK---SPAGHTFVLSSVRKGILPLIVEELI 688
Query: 1364 STRIMVKQAIKKLAPSQQ-ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
R K+A K+++ ++ +L I + RQLALK+ AN YGYT A G+ PC E++ SI
Sbjct: 689 LAR---KKARKEMSVTKDPVLLSILDGRQLALKISANSVYGYTGATTGGQFPCLEISTSI 745
Query: 1423 VQCGRSTL-------EKAISFVNENEKWKAKVIYGDTDRYTV 1457
GRS + EK + N K A VIYGDTD V
Sbjct: 746 TSYGRSMIDFTKMEVEKRYNIAN-GYKHNATVIYGDTDSVMV 786
>gi|393240523|gb|EJD48049.1| hypothetical protein AURDEDRAFT_102277 [Auricularia delicata
TFB-10046 SS5]
Length = 1067
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 235/507 (46%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + S +H +VG
Sbjct: 273 LRILSFDIECAGRKGIFPEANVDPVIQIASMVTRQGEDRPFIRNIFTLNSCAH---IVG- 328
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
D + F E L S + K + + DPD++ G++I L +L +RA L + N + R
Sbjct: 329 SDVRSF--DNEADLLSAWQKFVVTVDPDVITGYNIANFDLPYLLDRAKALKVDGFNKLGR 386
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+ IA I D A +G+ + ++ GR+ L
Sbjct: 387 M---TNIATA--------IKDTHFASKA---------------FGQRDSKECNIDGRLQL 420
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++++ M+ E KL Y++ AV+ L + + +T+ +G +R R Y + A
Sbjct: 421 DMFQYMQREHKLRSYSLNAVSAQFLGEQKEEVHHSAITE-LQNGTAESRRRLAIYCLKDA 479
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +L+RG Q +V S L+R A YL P
Sbjct: 480 YLPQRLMDKLMCFVNYTEMARVTGVPFNFLLARGQQIKVISQLMRKAKEDGYLI--PAMK 537
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V++P++G+Y +P+ LDF S+YPS+M+ +N+C+ T K +
Sbjct: 538 GEGSDDQYEG-ATVIDPKTGYYKEPIATLDFSSMYPSIMMGHNICYTTMTDKQTIDR--- 593
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
L +++D+ + P +V P RKG+LP +LE +LS R K +K
Sbjct: 594 ---------LGLVKDV--DYTQTPQNTFFVKPGRRKGLLPTILENLLSARKRAKADLKN- 641
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ + + RQLALK+ AN YG+ A +G +PC +++ + GR +EK S
Sbjct: 642 -ETDPFKRAVLDGRQLALKISANSVYGFPGAS-TGHLPCTDISSTTTAYGRQMIEKTKSV 699
Query: 1437 VNENEK------WKAKVIYGDTDRYTV 1457
V ++ + A+V+YGDTD V
Sbjct: 700 VEDHYRIVNGFEHDAQVVYGDTDSVMV 726
>gi|148690783|gb|EDL22730.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_b
[Mus musculus]
Length = 817
Score = 180 bits (456), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 231/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 308 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 359
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 360 PILGAKVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQAL------KV 413
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 414 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVISMVGRV 453
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 454 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 512
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A Q L
Sbjct: 513 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMRQGLLMPVVK 572
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 573 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 622
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 623 GAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 667
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 668 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 726
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 727 EKTKQLVESKYTVENGYDANAKVVYGDTD 755
Score = 43.5 bits (101), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 50/197 (25%)
Query: 6 PDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
P + + + IDHY+ APP+P + N VP++R +G T G C HI
Sbjct: 87 PSTEPLIFQQLEIDHYVGSAPPLPEGPLPSR-------NSVPILRAFGVTDEGFSVCCHI 139
Query: 64 HRALPYLYVPC-----ADIPVQLRQEDD------------------------------GY 88
PY Y P A+ +L+QE + GY
Sbjct: 140 QGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRESMFGY 199
Query: 89 M-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLV 147
H S L L + R+ + + VR G S P+E+++ F ++F+V
Sbjct: 200 HGHGPSPFLRITLALPRLMAPARRLLEQG--VRVPGLGT---PSFAPYEANVDFEIRFMV 254
Query: 148 DYNLYGMGHLHLSKLKF 164
D ++ G L L K+
Sbjct: 255 DADIVGCNWLELPAGKY 271
>gi|340959854|gb|EGS21035.1| DNA polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1108
Score = 180 bits (456), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 147/513 (28%), Positives = 238/513 (46%), Gaps = 71/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P++D++ N+V EN ++C +
Sbjct: 309 LRILSFDIECAGRKGIFPEPQHDAVIQIANIVTTYGENKP-----FVRNVFCLDTTSP-- 361
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I ++ KE + + + L DPD++ G++I +L +RA HL +
Sbjct: 362 ---IVATQILSFDKEEQMLAAWQNFLVRVDPDVITGYNIANFDFPYLLDRAEHLNVPKFR 418
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ SR K A D+ S + + G ++ G
Sbjct: 419 EWSRLK-GVKSVARDTNFSSK-------------------------QMGNRDTKATNISG 452
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ +L++ + L YT+ +V + L + + ++T+ F P +R R Y
Sbjct: 453 RLQLDLLQLIQRDHHLRSYTLNSVCQHFLGEQKEDVHHSMITELFEGTP-ESRRRLALYC 511
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q +
Sbjct: 512 LKDAYLPQRLMDKLSCLENYTEMARVTGVPFNFLLARGQQVKFLSQLFRKALEQKL--VI 569
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P +S+ E V+EP G+Y P+ LDF SLYPS+++A+NLC+ T + K
Sbjct: 570 PNLRSESSEEQYEG-ATVIEPVRGYYDVPIATLDFASLYPSIIMAHNLCYTTLIKK---- 624
Query: 1313 KENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
D+ KDE ++ PNG M+V K RKG+L ++LEE+L+ R KQ
Sbjct: 625 -----------KDVEKWNLKKDEDYIVTPNGDMFVTTKQRKGLLAQILEELLAAR---KQ 670
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A K+LA + + N RQLALK+ AN YG T A +G++PC E+A S GR +
Sbjct: 671 AKKELAAETDPFKKAVLNGRQLALKISANSVYGLTGAT-NGKLPCLEIASSTTAFGRQMI 729
Query: 1431 EKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
K V + A+VIYGDTD V
Sbjct: 730 MKTKEEVEKRYCIANGYSHDAQVIYGDTDSVMV 762
>gi|326428620|gb|EGD74190.1| polymerase [Salpingoeca sp. ATCC 50818]
Length = 1139
Score = 180 bits (456), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 152/510 (29%), Positives = 236/510 (46%), Gaps = 68/510 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
L +LS +++ R + P+P D + +A + E +S V ++ L C +
Sbjct: 341 LRILSFDIECAGRKGVFPEPDKDPVIQIANMVQVEGESKPFVRNVFTLGTCAP------I 394
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG KV C EI L + + DPDI+ G++I L FL RA HLG
Sbjct: 395 VG---SKVIACKTEIELLESWSAFVRECDPDIVTGYNITNFDLPFLMNRAKHLGA----- 446
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ P ++ S++SE + +G + + GR
Sbjct: 447 -RKFPYLGRLRNVQSKLSETKFSSKA--------------------YGTRESKVTSMEGR 485
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ L+V ++++ + KL YT+ +V+ L + + ++T +G R R Y +
Sbjct: 486 VPLDVLQILQRDYKLRSYTLNSVSAHFLSEQKEDVHHSIITD-LQNGNDETRRRLAVYCM 544
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L + E+ARV G+ +LSRG Q +V S L+R H + + P
Sbjct: 545 KDAYLPLRLLSKLMCVVNYMEMARVTGVPLSYLLSRGQQIKVISQLMR--HAGQHDLVIP 602
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
+ + S E V++P+ G+Y P+ LDF SLYPS+M+A+NLC+ T L P +
Sbjct: 603 VHERQGSDEQYEG-ATVIQPKRGYYDTPIATLDFSSLYPSIMMAHNLCYTTLLS---PQE 658
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
R LH D+ + PNG +V KVRKG+LP +LE +LS R K +
Sbjct: 659 ---------RSHLH-----PDDYIKTPNGDYFVKNKVRKGLLPLILESLLSARKRAKADL 704
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + + N RQLALK+ AN YG+T A G++PC ++ S+ GR +E
Sbjct: 705 KK--ETDPFRKSVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGREMIEAT 761
Query: 1434 ISFVNENEKWK------AKVIYGDTDRYTV 1457
V K A VIYGDTD V
Sbjct: 762 KQHVESRYNVKNGYKHDAVVIYGDTDSVMV 791
Score = 40.8 bits (94), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
DS ++ +F + + +D Y+ P+PG + G + V + R++G T G +H
Sbjct: 117 DSSKEAFVF--QQLDLDSYLDVPLPG-------MPGPQRGNVQIFRLFGVTKGGNSVLMH 167
Query: 63 IHRALPYLYVPC 74
+H P++Y P
Sbjct: 168 VHGFCPFIYTPA 179
>gi|351727343|ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA polymerase delta catalytic subunit
gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine max]
Length = 1088
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 149/511 (29%), Positives = 242/511 (47%), Gaps = 71/511 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R P+P +D + N+V L E D + L C +V
Sbjct: 273 ILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQGE-DQPFIRNVMTLKSCSP------IV 325
Query: 1015 GIPDCKVFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
G+ D F +E+ L + FI+ DPDI++G++I L +L ERA +L I
Sbjct: 326 GV-DVMPFETEREVLLAWRDFIR---EVDPDIIIGYNICKFDLPYLIERALNLKIAEFPI 381
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R S++ D+ S R ++G + + V GR
Sbjct: 382 LGRIR-NSRVRVKDTTFSSR-------------------------QYGTRESKEVAVEGR 415
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++M+ + KL+ Y++ +V+ L + + +++ +G R R Y +
Sbjct: 416 VTFDLLQVMQRDYKLSSYSLNSVSSHFLSEQKEDVHHSIISD-LQNGNAETRRRLAVYCL 474
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L ++++L I E+ARV G+ +LSRG +V S LLR A +N + P
Sbjct: 475 KDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRRARQKNL--VIP 532
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
Q S+ V+E +GFY P+ LDF SLYPS+M+AYNLC+CT ++P
Sbjct: 533 NAKQAGSEQGTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTL---VIPED 589
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
L + P V R P+G +V ++KG+LP +LEE+L+ R K+A
Sbjct: 590 ARKLNI----PPESVNRT--------PSGETFVKSNLQKGILPEILEELLTAR---KRAK 634
Query: 1374 KKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
L ++ L + + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 635 ADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATI-GQLPCLEISSSVTSYGRQMIEH 693
Query: 1433 AISFVNEN------EKWKAKVIYGDTDRYTV 1457
V + + A+VIYGDTD V
Sbjct: 694 TKKLVEDKFTTLNGYEHNAEVIYGDTDSVMV 724
>gi|354548476|emb|CCE45212.1| hypothetical protein CPAR2_702240 [Candida parapsilosis]
Length = 1080
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 234/511 (45%), Gaps = 68/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSD---HAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R + P+ +D + +A D ++ + C S
Sbjct: 286 LRILSFDIECAGRKGIFPEAEHDPVIQIANVVSKLGDSKPFVRNVFTVNTCAS------- 338
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I +++ KE + H+ + + DPD+++G++ + +L +RA L
Sbjct: 339 --IIGSQIYEHEKEEEMLLHWKEFVNEVDPDVIIGYNTANFDIPYLLDRARAL------K 390
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ + P ++ + EI E ++ + A +G +++ GR
Sbjct: 391 VHQFPYFGRLKSVKQEIKE---------------AIFSSRA-----YGTRENKVVNIDGR 430
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ L++ + ++ E KL YT+ +V+ L + + ++T +G R R Y +
Sbjct: 431 MQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGNKETRRRLAVYCL 489
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L + +E+ARV G+ F +LSRG Q +V S L R ++ + P
Sbjct: 490 KDAYLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVVSQLFRKCLQED--IVIP 547
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
S E V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 548 NMKSEGSSEEFEG-ATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL------- 599
Query: 1314 ENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
N + +F DLK+E PNG +V +KG+LP +L E+L+ R K
Sbjct: 600 -NRNSIKAF--------DLKEEDYTKTPNGDYFVHADKKKGILPTILNELLTARKKAKTD 650
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K + N RQLALK+ AN YG+T A G++PC ++ S+ GR +EK
Sbjct: 651 LKN--EKDPFKKDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGREMIEK 707
Query: 1433 AISFVNENEKWK------AKVIYGDTDRYTV 1457
+ V E K A VIYGDTD V
Sbjct: 708 TKNEVQERYSKKNGYPYDAHVIYGDTDSVMV 738
>gi|11067381|ref|NP_067694.1| DNA polymerase delta catalytic subunit [Rattus norvegicus]
gi|3913500|sp|O54747.1|DPOD1_RAT RecName: Full=DNA polymerase delta catalytic subunit
gi|2687728|emb|CAA10946.1| DNA polymerase delta, catalytic subunit [Rattus norvegicus]
Length = 1103
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 230/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 306 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 357
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 358 PILGAKVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTL------KV 411
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 412 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVVSMVGRV 451
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 452 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 510
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 511 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMREGLLMPVVK 570
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 571 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR---P 620
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 621 GAAQKLGLKP------------DEFIKTPTGDEFVKASVRKGLLPQILENLLSAR---KR 665
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ N YG+T A G++PC E++ S+ GR +
Sbjct: 666 AKAELAQETDPLRRQVLDGRQLALKVSPNSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 724
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 725 EKTKQLVETKYTLENGYDANAKVVYGDTD 753
Score = 44.3 bits (103), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 76/199 (38%), Gaps = 54/199 (27%)
Query: 6 PDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQG--GKVNEVPVIRVYGSTPAGQKTCL 61
P + + + IDHY+ +PP+P +G N VP++R +G T G C
Sbjct: 85 PSTEPLIFQQLEIDHYVGTSPPLP---------EGPPASRNSVPILRAFGVTDEGFSVCC 135
Query: 62 HIHRALPYLYVPC---------------------------------ADIPVQL--RQEDD 86
HIH PY Y P A + ++L R+
Sbjct: 136 HIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSRESMF 195
Query: 87 GYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQF 145
GY H S L L + R+ + + +R G S P+E+++ F ++F
Sbjct: 196 GYHGHGPSPFLRITLALPRLMAPARRLLEQG--IRVPGLGT---PSFAPYEANVDFEIRF 250
Query: 146 LVDYNLYGMGHLHLSKLKF 164
+VD ++ G L L K+
Sbjct: 251 MVDADIVGCNWLELPAGKY 269
>gi|403299517|ref|XP_003940530.1| PREDICTED: DNA polymerase delta catalytic subunit [Saimiri
boliviensis boliviensis]
Length = 1046
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 235/512 (45%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 362 PILGAKVQSYEKEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 413
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P ++A S I + + GR + +
Sbjct: 414 -KVQTFPFLGRVAGLRSNIRDSSFQSK--------------------QTGRRDTKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 512 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAKQEGLLMP 571
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 572 VVRSEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL-- 622
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG+ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 623 -RPGAAQKLGLK------------EDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR-- 667
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 668 -KRAKAELARETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGR 725
Query: 1428 STLEKAISFVNENEKWK------AKVIYGDTD 1453
+EK V + AKV+YGDTD
Sbjct: 726 QMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 757
Score = 48.1 bits (113), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 54/201 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGG---KVNEVPVIRVYGSTPAGQKT 59
D Q + IF + + IDHY+ P P + GG VPV+R +G T G
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPAQP--------VSGGPPLSRGSVPVLRAFGVTDEGVSV 137
Query: 60 CLHIHRALPYLYVPC---------------------------------ADIPVQL--RQE 84
C HIH PY Y P A + V+L R+
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHLGELQRELNLAISRDNRGGKELTGPAVLAVELCSRES 197
Query: 85 DDGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLL 143
GY H SL L L + R+ + + V + S P+E+++ F +
Sbjct: 198 MFGYHGHGPSLFLRITLALPRLVAPARRLLEQGIRV-----AGLGTPSFAPYEANVDFEI 252
Query: 144 QFLVDYNLYGMGHLHLSKLKF 164
+F+VD ++ G L L K+
Sbjct: 253 RFMVDTDIVGCNWLELPAGKY 273
>gi|181622|gb|AAA35768.1| DNA polymerase delta [Homo sapiens]
Length = 1107
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 236/512 (46%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 362 PILGAKVQSYEKEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 413
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P ++A S I + + GR + +
Sbjct: 414 -KVQTFPFLGRVAGLCSNIRDSSFQSK--------------------QTGRRDTKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 512 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMP 571
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 572 VVKSEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL-- 622
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 623 -RPGTAQKLGLT------------EDQFIRTPTGDEFVKTSVRKGLLPQILENLLSAR-- 667
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 668 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGR 725
Query: 1428 STLEKAISFVNENEKWK------AKVIYGDTD 1453
+EK V + AKV+YGDTD
Sbjct: 726 QMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 757
Score = 43.9 bits (102), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG VPV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPAQPVPGGP-------PPSHGSVPVLRAFGVTDEGFSVC 138
Query: 61 LHIHRALPYLYVP 73
HIH PY Y P
Sbjct: 139 CHIHGFAPYFYTP 151
>gi|294660060|ref|XP_002770696.1| DEHA2G22308p [Debaryomyces hansenii CBS767]
gi|199434442|emb|CAR66020.1| DEHA2G22308p [Debaryomyces hansenii CBS767]
Length = 1080
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 234/512 (45%), Gaps = 70/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+ +D + NVV+ A E+ ++ + C S
Sbjct: 288 LRILSFDIECAGRKGVFPEAEHDPVIQIANVVSKAGES-RPFVRNVFTVNTCSS------ 340
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I ++F + E + H+ + + D D+++G++ + +L +RA LG+
Sbjct: 341 ---IIGSQIFEHTTEEEMLMHWKEFIVKVDADVIIGYNTANFDIPYLLDRARALGLKSF- 396
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVG 1131
P S++ E+ KDA+ +G +++
Sbjct: 397 -----PYFSRLNNVKQEV---------------------KDAVFSSRAYGTRENKVVNID 430
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ L++ + ++ E KL YT+ +V+ L + + +++ +G R R Y
Sbjct: 431 GRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVHHSIISD-LQNGTKETRRRLAVY 489
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ + L L ++++L + +E+ARV G+ F +LSRG Q +V S L R N +
Sbjct: 490 CLKDSYLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVISQLFRKCLEDN--IV 547
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P S E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 548 IPNMKSEGSNEEYEG-ATVIEPIRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKQTI 606
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
N +D+ + PNG +V +KG+LP +L+E+L+ R K
Sbjct: 607 KNFNL---------------TEDDYTLTPNGDYFVKDHKKKGILPTILDELLTARKKAKS 651
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K + + N RQLALK+ AN YG+T A G++PC ++ S+ GR +E
Sbjct: 652 DLK--METDPFKRDVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGREMIE 708
Query: 1432 KAISFVNE------NEKWKAKVIYGDTDRYTV 1457
K + V E + A+VIYGDTD V
Sbjct: 709 KTKNEVEEFYSIKNGHPFDAQVIYGDTDSVMV 740
>gi|225555953|gb|EEH04243.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
G186AR]
Length = 1111
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 240/515 (46%), Gaps = 75/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y +S+ R++ +
Sbjct: 313 LRILSFDIECAGRKGVFPEANQDPVIQIANV------------VTRYGESKPFIRNVFVL 360
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V ++ E + + L DPD+++G++I +L +RA HL
Sbjct: 361 DTCSLIVNTQLLEFDTEEKMLMAWKNFLVEVDPDVIIGYNIANFDFPYLLKRAEHLKCSG 420
Query: 1071 LNDISRTP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
+ SR + S++ GD+ S + I G + +
Sbjct: 421 FHFWSRLKHIPSRV--GDARFSSKQI-------------------------GNRESKSTN 453
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GRI L++ +L++ + +L YT+ +V L + + ++T+ F P +R R
Sbjct: 454 ISGRIQLDLLQLVQRDYQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGSPD-SRRRLA 512
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q +
Sbjct: 513 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQQLV 572
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ N + Q V+EP FY P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 573 IPNLRNESTSEQYEGAT---VIEPIRDFYDVPIATLDFASLYPSIIQAHNLCYTTLL--- 626
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K++T+ D H +++ +D ++ PNG + KVRKG+L ++LEE+L R
Sbjct: 627 ---KKSTI-------DAHQMKEGED-YIVTPNGDRFCTSKVRKGLLTQILEELLGAR--- 672
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 673 KRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLPIASSTTSYGRQ 731
Query: 1429 TLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + AKV+YGDTD V
Sbjct: 732 MIEKTKEEVEAKYTIANGYSHDAKVVYGDTDSVMV 766
>gi|296816038|ref|XP_002848356.1| DNA polymerase delta catalytic subunit [Arthroderma otae CBS 113480]
gi|238841381|gb|EEQ31043.1| DNA polymerase delta catalytic subunit [Arthroderma otae CBS 113480]
Length = 1113
Score = 179 bits (455), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 240/511 (46%), Gaps = 66/511 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R + P+P D + +A + ++V+ C S
Sbjct: 314 LRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKPFVRNVFVMDTCSS------- 366
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I + +V KE + + + DPD+++G++I +L +RA HLG
Sbjct: 367 --IVNTQVLEFDKEEKMLIAWRDFVEKVDPDVIIGYNIANFDFPYLLDRAEHLGC----- 419
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
++ P S++ +G+ +S K + + G+ + + GR
Sbjct: 420 -TKFPYWSRL---------KGV-----------QSHAIKASFSSKQMGKRDSKATNTNGR 458
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I L++ +L++ + L YT+ +V L + + ++T+ + P +R R Y +
Sbjct: 459 IQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITELYNGTPD-SRRRLAVYCL 517
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q +
Sbjct: 518 KDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLARGQQIKFISQLFRKALEQKLVIPDL 577
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
N + ++Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L K K
Sbjct: 578 KNDENSNQQYEGAT--VIEPVRDYYPVPIATLDFASLYPSIIQAHNLCYTTLLNKRTVEK 635
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
LG+ ++ ++ PN M+ KVRKG+L ++LEE+LS R K+A
Sbjct: 636 ---LGLKK-----------GEDYIVTPNDDMFCTAKVRKGLLSQILEELLSAR---KRAK 678
Query: 1374 KKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
++LA + + + N RQLALK+ AN YG T A +G++PC +A S GR +EK
Sbjct: 679 RELAVEKDPFKKAVLNGRQLALKISANSVYGITGAT-NGKLPCLPIASSTTSYGRQMIEK 737
Query: 1433 ------AISFVNENEKWKAKVIYGDTDRYTV 1457
A ++ AKVIYGDTD V
Sbjct: 738 TKDEVEARYTISNGYTHDAKVIYGDTDSVMV 768
>gi|14250670|gb|AAH08800.1| Polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Homo
sapiens]
gi|123998555|gb|ABM86879.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[synthetic construct]
gi|157929094|gb|ABW03832.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[synthetic construct]
Length = 1107
Score = 179 bits (455), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 236/512 (46%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 362 PILGAKVQSYEKEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 413
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P ++A S I + + GR + +
Sbjct: 414 -KVQTFPFLGRVAGLCSNIRDSSFQSK--------------------QTGRRDTKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 512 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMP 571
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 572 VVKSEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL-- 622
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 623 -RPGTAQKLGLT------------EDQFIRTPTGDEFVKTSVRKGLLPQILENLLSAR-- 667
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 668 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGR 725
Query: 1428 STLEKAISFVNENEKWK------AKVIYGDTD 1453
+EK V + AKV+YGDTD
Sbjct: 726 QMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 757
Score = 43.9 bits (102), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG VPV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPAQPVPGGP-------PPSHGSVPVLRAFGVTDEGFSVC 138
Query: 61 LHIHRALPYLYVP 73
HIH PY Y P
Sbjct: 139 CHIHGFAPYFYTP 151
>gi|325090528|gb|EGC43838.1| DNA polymerase subunit delta large [Ajellomyces capsulatus H88]
Length = 1111
Score = 179 bits (455), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 240/515 (46%), Gaps = 75/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y +S+ R++ +
Sbjct: 313 LRILSFDIECAGRKGVFPEANQDPVIQIANV------------VTRYGESKPFIRNVFVL 360
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V ++ E + + L DPD+++G++I +L +RA HL
Sbjct: 361 GTCSLIVNTQLLEFDTEEKMLMAWKNFLVEVDPDVIIGYNIANFDFPYLLKRAEHLKCSG 420
Query: 1071 LNDISRTP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
+ SR + S++ GD+ S + I G + +
Sbjct: 421 FHFWSRLKHIPSRV--GDARFSSKQI-------------------------GNRESKSTN 453
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GRI L++ +L++ + +L YT+ +V L + + ++T+ F P +R R
Sbjct: 454 ISGRIQLDLLQLVQRDYQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTPD-SRRRLA 512
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q +
Sbjct: 513 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQQLV 572
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ N + Q V+EP FY P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 573 IPNLRNESTSEQYEGAT---VIEPIRDFYDVPIATLDFASLYPSIIQAHNLCYTTLL--- 626
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K++T+ D H +++ +D ++ PNG + KVRKG+L ++LEE+L R
Sbjct: 627 ---KKSTI-------DAHQMKEGED-YIVTPNGDRFCTSKVRKGLLTQILEELLGAR--- 672
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 673 KRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLPIASSTTSYGRQ 731
Query: 1429 TLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + AKV+YGDTD V
Sbjct: 732 MIEKTKEEVEAKYTIANGYSHDAKVVYGDTDSVMV 766
>gi|400602303|gb|EJP69905.1| DNA polymerase family B [Beauveria bassiana ARSEF 2860]
Length = 1106
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 239/509 (46%), Gaps = 62/509 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P +D + +A + + + + S I
Sbjct: 306 LRILSFDIECAGRKGIFPEPEHDPVIQIANVVTRYGEKKPFVRNVFCLDTTS------SI 359
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V KE + S + + L + DPDI++G++I +L RA HL + +R
Sbjct: 360 VATQVLEYEKEAKMLSEWQQFLITVDPDIIIGYNIANFDFPYLINRAKHLKVNGFEYWTR 419
Query: 1077 TP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
P + S++ D+ S + I G + GR+
Sbjct: 420 LPSIPSRVK--DTSFSSKQI-------------------------GNRDTKSTNTNGRLQ 452
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ +L++ + L YT+ +V L + + ++T+ F P +R R Y +
Sbjct: 453 LDLLQLIQRDHHLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTP-ESRRRLAIYCLKD 511
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + P
Sbjct: 512 AYLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFVSQLFRKALEQKL--VIPNM 569
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
S E V+EP G+Y P+ LDF SLYPS+M A+NLC+ T L ++++
Sbjct: 570 KGDPSDDQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTT-----LITRKD 623
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ ++++D ++ ++ PNG M+V K RKG+L ++LEE+LS R KQA ++
Sbjct: 624 RIA------QFNLVKD--EDYIVTPNGDMFVTTKQRKGLLAQILEELLSAR---KQAKRE 672
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + N RQLALK+ AN YG T A +G++PC +A S GR +EK
Sbjct: 673 LAVETDPFKKAVLNGRQLALKISANSVYGLTGAT-TGKLPCLAIASSTTSFGRQMIEKTK 731
Query: 1435 SFVNEN------EKWKAKVIYGDTDRYTV 1457
V + A+VIYGDTD V
Sbjct: 732 DEVEKKYCIANGYSHDAQVIYGDTDSVMV 760
>gi|156616275|ref|NP_002682.2| DNA polymerase delta catalytic subunit [Homo sapiens]
gi|379030588|ref|NP_001243778.1| DNA polymerase delta catalytic subunit [Homo sapiens]
gi|50403732|sp|P28340.2|DPOD1_HUMAN RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase subunit delta p125
gi|21885469|gb|AAM76971.1| polymerase (DNA directed), delta 1, catalytic subunit [Homo sapiens]
gi|119592262|gb|EAW71856.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa, isoform
CRA_a [Homo sapiens]
gi|119592263|gb|EAW71857.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa, isoform
CRA_a [Homo sapiens]
Length = 1107
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 236/512 (46%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 362 PILGAKVQSYEKEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 413
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P ++A S I + + GR + +
Sbjct: 414 -KVQTFPFLGRVAGLCSNIRDSSFQSK--------------------QTGRRDTKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 512 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMP 571
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 572 VVKSEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL-- 622
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 623 -RPGTAQKLGLT------------EDQFIRTPTGDEFVKTSVRKGLLPQILENLLSAR-- 667
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 668 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGR 725
Query: 1428 STLEKAISFVNENEKWK------AKVIYGDTD 1453
+EK V + AKV+YGDTD
Sbjct: 726 QMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 757
Score = 44.3 bits (103), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG VPV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPAQPVPGGP-------PPSRGSVPVLRAFGVTDEGFSVC 138
Query: 61 LHIHRALPYLYVP 73
HIH PY Y P
Sbjct: 139 CHIHGFAPYFYTP 151
>gi|68478001|ref|XP_717004.1| hypothetical protein CaO19.5182 [Candida albicans SC5314]
gi|68478136|ref|XP_716937.1| hypothetical protein CaO19.12649 [Candida albicans SC5314]
gi|46438626|gb|EAK97954.1| hypothetical protein CaO19.12649 [Candida albicans SC5314]
gi|46438697|gb|EAK98024.1| hypothetical protein CaO19.5182 [Candida albicans SC5314]
Length = 678
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 229/484 (47%), Gaps = 56/484 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A + + + + + S S++G
Sbjct: 244 LRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKPFVRNVFTVNTCS---SIIG- 299
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++F +E + H+ + + DPD+++G++ + ++ RA LG LND
Sbjct: 300 --SQIFEHQREEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALG---LNDF-- 352
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVGGRIV 1135
P ++ EI KDA+ +G +++ GR+
Sbjct: 353 -PFFGRLKRVKQEI---------------------KDAVFSSRAYGTRENKVVNIDGRMQ 390
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ + ++ E KL YT+ +V+ L + + ++T +G R R Y +
Sbjct: 391 LDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGTKETRRRLAVYCLKD 449
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L ++++L + +E+ARV G+ F +LSRG Q +V S L R ++ + P
Sbjct: 450 AFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVISQLFRKCLQED--IVIPNL 507
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
S E V+EPE G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 508 KSEGSNEEYEG-ATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNK---NSIK 563
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
G++ +D+ PNG +V +RKG+LP +L+E+L+ R K +KK
Sbjct: 564 AFGLT------------EDDYTKTPNGDYFVHSNLRKGILPTILDELLTARKKAKADLKK 611
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + N RQLALK+ AN YG+T A G++PC ++ S+ GR +EK +
Sbjct: 612 --ETDPFKKDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGREMIEKTKN 668
Query: 1436 FVNE 1439
V E
Sbjct: 669 EVQE 672
>gi|73946992|ref|XP_851285.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 1 [Canis
lupus familiaris]
Length = 1107
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 233/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 362 PILGAKVQSYEREEELLQAWSTFIRTMDPDVITGYNIQNFDLPYLISRAQTLKVHTF--- 418
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
P +++ S I + + GR + + + GR+
Sbjct: 419 ---PFLGRVSGLRSNIRDSSFQSK--------------------QTGRRDSKVVSMVGRV 455
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 456 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVYCLK 514
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 515 DAFLPLRLLERLMVLVNAMEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMREGLLMPVVK 574
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 575 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 624
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG++ KD+ + P G +V VRKG+LP++LE +LS R K+
Sbjct: 625 GAAQKLGLT------------KDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR---KR 669
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 670 AKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 728
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 729 EKTKQLVESKYTVENGYSANAKVVYGDTD 757
Score = 46.2 bits (108), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 76/200 (38%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG + VP++R +G T G C
Sbjct: 88 DPQKEPLIF--QQLEIDHYVGPAQPLPGAPT-------PSRDSVPILRAFGVTDEGVSVC 138
Query: 61 LHIHRALPYLYVPC---------------------------------ADIPVQL--RQED 85
HIH PY Y P A + V+L R+
Sbjct: 139 CHIHGFAPYFYTPAPSGFGSEHLGDLQRELNAAISRDQRGGKELTGPAVLSVELCSRESM 198
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L L + R+ + + V + S P+E+++ F ++
Sbjct: 199 FGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRV-----AGLGTPSFAPYEANVDFEIR 253
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 254 FMVDTDIVGCNWLELPAEKY 273
>gi|334188613|ref|NP_001190611.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
gi|332010439|gb|AED97822.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
Length = 1112
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 153/527 (29%), Positives = 244/527 (46%), Gaps = 86/527 (16%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R P+ ++D + N+V L E D + L C +V
Sbjct: 308 VLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGE-DHPFVRNVMTLKSCAP------IV 360
Query: 1015 GIPDCKVFVCSKEIHL--------FSHFIKILCS-------FDPDILMGWDIQGGSLGFL 1059
G+ D F +E+ L ++I I S DPDI++G++I L +L
Sbjct: 361 GV-DVMSFETEREVLLAWRVLFLPLHYYICITSSSSDLIRDVDPDIIIGYNICKFDLPYL 419
Query: 1060 AERAAHLGIGLLNDISRTPLESKIAAGDSEISER--GITDNMLAEPVVAESLLAKDAIIE 1117
ERAA LGI + R S++ DS S R GI + +K+ IE
Sbjct: 420 IERAATLGIEEFPLLGRVK-NSRVRVRDSTFSSRQQGIRE-------------SKETTIE 465
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
GR ++ + + + KL+ Y++ +V+ L + + ++T
Sbjct: 466 --------------GRFQFDLIQAIHRDHKLSSYSLNSVSAHFLSEQKEDVHHSIITD-L 510
Query: 1178 ASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVES 1237
+G R R Y + A L ++++L I E+ARV G+ +L+RG +V S
Sbjct: 511 QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLARGQSIKVLS 570
Query: 1238 MLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIA 1297
LLR +N + P Q S+ V+E +GFY P+ LDF SLYPS+M+A
Sbjct: 571 QLLRKGKQKNL--VLPNAKQSGSEQGTYEGATVLEARTGFYEKPIATLDFASLYPSIMMA 628
Query: 1298 YNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPR 1357
YNLC+CT + P L + P HV + P+G +V ++KG+LP
Sbjct: 629 YNLCYCTL---VTPEDVRKLNL----PPEHVTKT--------PSGETFVKQTLQKGILPE 673
Query: 1358 LLEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCA 1416
+LEE+L+ R K+A L ++ L + + + RQLALK+ AN YG+T A G++PC
Sbjct: 674 ILEELLTAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCL 729
Query: 1417 ELADSIVQCGRSTLEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
E++ S+ GR +E+ V + ++ A+VIYGDTD V
Sbjct: 730 EISSSVTSYGRQMIEQTKKLVEDKFTTLGGYQYNAEVIYGDTDSVMV 776
>gi|218185393|gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indica Group]
Length = 1087
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/511 (29%), Positives = 240/511 (46%), Gaps = 71/511 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R P+P +D + N+V L E + L C +V
Sbjct: 298 ILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQGEGQP-FVRNVMTLKSCSP------IV 350
Query: 1015 GIPDCKVFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
G+ D F +++ L + FI+ DPDI++G++I L +L ERA L I
Sbjct: 351 GV-DVMSFDTERDVLLAWRDFIR---EVDPDIIIGYNICKFDLPYLIERAEVLKIVEFPI 406
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R S++ D+ S R ++G + + V GR
Sbjct: 407 LGRIR-NSRVRVRDTTFSSR-------------------------QYGMRESKDVAVEGR 440
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ + M+ + KL+ Y++ +V+ L + + +++ +G R R Y +
Sbjct: 441 VQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISD-LQNGNSETRRRLAVYCL 499
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L ++++L I E+ARV G+ +LSRG +V S LLR A +N L I
Sbjct: 500 KDAYLPQRLLDKLMYIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN-LVIPN 558
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
Q + Q E V+E +GFY P+ LDF SLYPS+M+AYNLC+CT ++P +
Sbjct: 559 IKGQASGQDTFEG-ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCT----LVPPE 613
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
D L + + P+G +V P V+KG+LP +LEE+L+ R K+A
Sbjct: 614 -----------DARKLNLPPESVNKTPSGETFVKPDVQKGILPEILEELLAAR---KRAK 659
Query: 1374 KKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
L ++ R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 660 ADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATV-GQLPCLEISSSVTSYGRQMIEH 718
Query: 1433 AISFVNEN------EKWKAKVIYGDTDRYTV 1457
V + + A+VIYGDTD V
Sbjct: 719 TKKLVEDKFTTLGGYEHNAEVIYGDTDSVMV 749
>gi|62088700|dbj|BAD92797.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa variant
[Homo sapiens]
Length = 1011
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 236/512 (46%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 312 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 363
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+I+ DPD++ G++IQ L +L RA L +
Sbjct: 364 PILGAKVQSYEKEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTLKVQTF 420
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
P ++A S I + + GR + +
Sbjct: 421 ------PFLGRVAGLCSNIRDSSFQSK--------------------QTGRRDTKVVSMV 454
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 455 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 513
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 514 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMP 573
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 574 VVKSEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL-- 624
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 625 -RPGTAQKLGLT------------EDQFIRTPTGDEFVKTSVRKGLLPQILENLLSAR-- 669
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 670 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGR 727
Query: 1428 STLEKAISFVNENEKWK------AKVIYGDTD 1453
+EK V + AKV+YGDTD
Sbjct: 728 QMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 759
Score = 44.7 bits (104), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 76/200 (38%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG VPV+R +G T G C
Sbjct: 90 DPQTEPLIF--QQLEIDHYVGPAQPVPGGP-------PPSRGSVPVLRAFGVTDEGFSVC 140
Query: 61 LHIHRALPYLYVPC---------------------------------ADIPVQL--RQED 85
HIH PY Y P A + V+L R+
Sbjct: 141 CHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDSRGGRELTGPAVLAVELCSRESM 200
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L + + R+ + + +R G S P+E+++ F ++
Sbjct: 201 FGYHGHGPSPFLRITVALPRLVAPARRLLEQG--IRVAGLGT---PSFAPYEANVDFEIR 255
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 256 FMVDTDIVGCNWLELPAGKY 275
>gi|145251457|ref|XP_001397242.1| DNA polymerase delta catalytic subunit [Aspergillus niger CBS 513.88]
gi|134082776|emb|CAK48550.1| unnamed protein product [Aspergillus niger]
gi|350636552|gb|EHA24912.1| hypothetical protein ASPNIDRAFT_210383 [Aspergillus niger ATCC 1015]
Length = 1105
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 239/517 (46%), Gaps = 80/517 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A V Y +S+ R++ +
Sbjct: 308 LRILSFDIECAGRKGIFPEPNQDPVIQIANV------------VTRYGESKPFIRNVFVL 355
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSF-------DPDILMGWDIQGGSLGFLAERAAHLGIG 1069
C + V + +I F K+L ++ DPD+++G++I +L +RA HL
Sbjct: 356 DTCSLIV-NTQILEFKDEGKMLMAWRDFVQKVDPDVIIGYNIANFDFPYLLDRAKHL--- 411
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
+ P +++ S+ E + + G +
Sbjct: 412 ---KCTGFPYWTRLNGVQSQSKETNFSSKQM--------------------GNRDTKSTN 448
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
GRI L++ +L++ + L YT+ +V+ L + + ++T+ + P +R R
Sbjct: 449 TNGRIQLDMLQLVQRDYHLRSYTLNSVSYEFLGEQKEDVHHTMITELYNGTPD-SRRRLA 507
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY- 1248
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q
Sbjct: 508 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQQLV 567
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
+ + N + + A V+EP G+Y P+ LDF SLYPS++ A+NLC+ T L K
Sbjct: 568 IPNTKSNDEQDYEGAT-----VIEPVRGYYGVPIATLDFASLYPSIIQAHNLCYTTLLNK 622
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
+ L+ +KDE ++ PNG M+ KVRKG+L ++LEE+LS R
Sbjct: 623 ---------------SSVERLKLVKDEDYIVTPNGDMFCTAKVRKGLLSQILEELLSAR- 666
Query: 1368 MVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S G
Sbjct: 667 --KRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLPIASSTTSYG 723
Query: 1427 RSTLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
R +EK A + AKVIYGDTD V
Sbjct: 724 RQMIEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMV 760
>gi|342874671|gb|EGU76649.1| hypothetical protein FOXB_12838 [Fusarium oxysporum Fo5176]
Length = 1054
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 237/506 (46%), Gaps = 65/506 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A + I + +C E+ I
Sbjct: 255 LRILSFDIECAGRKGIFPEANHDPVIQIANIVTQYGEKKPFIRNV-FCLQETS-----SI 308
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ KE + S + K L DPDI+ G++I +L +RA HL + +R
Sbjct: 309 VATQILEYEKEEKMLSDWQKFLIRADPDIITGYNISNFDFPYLLDRAKHLKVSGFEYWTR 368
Query: 1077 TP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
P ++SK A ++ S + + G + GR+
Sbjct: 369 IPSMQSK--AKETNFSSK-------------------------QMGNRDTKATNTNGRLQ 401
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ +L++ + L YT+ +V+ L + + ++T+ F P +R R Y +
Sbjct: 402 LDLLQLIQRDHHLRSYTLNSVSANFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKD 460
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + P
Sbjct: 461 AYLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQKL--VIPNL 518
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
AS E V+EP G+Y P+ LDF SLYPS+M A+NLC+ T + K
Sbjct: 519 KSEASDEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLVSK------K 571
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ + + D ++ ++ PNG +V K RKG+L ++LEE+L+ R KQA ++
Sbjct: 572 AIEAFNLKKD--------EDYIVTPNGDTFVTIKQRKGLLAQILEELLAAR---KQAKRE 620
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + N RQLALK+ AN YG T A +G++PC E+A S GR +EK
Sbjct: 621 LAVETDPFKKAVLNGRQLALKISANSVYGLTGAT-TGKLPCLEIASSTTSFGRKMIEKTK 679
Query: 1435 SFVNENE-------KWKAKVIYGDTD 1453
V EN A+VIYGDTD
Sbjct: 680 EEV-ENRYNIANGYSHDAQVIYGDTD 704
>gi|115484523|ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group]
gi|13124219|sp|Q9LRE6.1|DPOD1_ORYSJ RecName: Full=DNA polymerase delta catalytic subunit
gi|9188570|dbj|BAA99573.1| OsPol delta large subunit [Oryza sativa Japonica Group]
gi|62734232|gb|AAX96341.1| dna polymerase delta catalytic subunit (ec 2.7.7.7) [Oryza sativa
Japonica Group]
gi|77549018|gb|ABA91815.1| DNA polymerase delta catalytic subunit, putative, expressed [Oryza
sativa Japonica Group]
gi|113644627|dbj|BAF27768.1| Os11g0186400 [Oryza sativa Japonica Group]
Length = 1105
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/511 (29%), Positives = 240/511 (46%), Gaps = 71/511 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R P+P +D + N+V L E + L C +V
Sbjct: 316 ILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQGEGQP-FVRNVMTLKSCSP------IV 368
Query: 1015 GIPDCKVFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
G+ D F +++ L + FI+ DPDI++G++I L +L ERA L I
Sbjct: 369 GV-DVMSFDTERDVLLAWRDFIR---EVDPDIIIGYNICKFDLPYLIERAEVLKIVEFPI 424
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R S++ D+ S R ++G + + V GR
Sbjct: 425 LGRIR-NSRVRVRDTTFSSR-------------------------QYGMRESKDVAVEGR 458
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ + M+ + KL+ Y++ +V+ L + + +++ +G R R Y +
Sbjct: 459 VQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISD-LQNGNSETRRRLAVYCL 517
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L ++++L I E+ARV G+ +LSRG +V S LLR A +N L I
Sbjct: 518 KDAYLPQRLLDKLMYIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN-LVIPN 576
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
Q + Q E V+E +GFY P+ LDF SLYPS+M+AYNLC+CT ++P +
Sbjct: 577 IKGQASGQDTFEG-ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCT----LVPPE 631
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
D L + + P+G +V P V+KG+LP +LEE+L+ R K+A
Sbjct: 632 -----------DARKLNLPPESVNKTPSGETFVKPDVQKGILPEILEELLAAR---KRAK 677
Query: 1374 KKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
L ++ R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 678 ADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATV-GQLPCLEISSSVTSYGRQMIEH 736
Query: 1433 AISFVNEN------EKWKAKVIYGDTDRYTV 1457
V + + A+VIYGDTD V
Sbjct: 737 TKKLVEDKFTTLGGYEHNAEVIYGDTDSVMV 767
>gi|332241130|ref|XP_003269738.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit, partial [Nomascus leucogenys]
Length = 1071
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 235/517 (45%), Gaps = 89/517 (17%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAVEIYVLLYCKSESHQRSLVG 1015
L +LS +++ R + P+P D I + +L L + + E R +
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLG-------------LRWGEPEPFLRLALT 356
Query: 1016 IPDCKVFVCSKE---------IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
+ C + +K + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 357 LRPCAPILGAKVQSYENEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL 413
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
+ P ++A S I + + GR
Sbjct: 414 ------KVQTFPFLGRVAGLRSNIRDSSFQSK--------------------QTGRRDTK 447
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ + GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R
Sbjct: 448 VVSMLGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRR 506
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y + A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A +
Sbjct: 507 RLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHE 566
Query: 1247 NYL---AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFC 1303
L S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+
Sbjct: 567 GLLMPVVKSEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYT 619
Query: 1304 TCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEIL 1363
T L P LG++ +D+ + P G +V VRKG+LP++LE +L
Sbjct: 620 TLL---RPGAAQKLGLT------------EDQFIRTPTGDEFVKTSVRKGLLPQILENLL 664
Query: 1364 STRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
S R K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+
Sbjct: 665 SAR---KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSV 720
Query: 1423 VQCGRSTLEKAISFVNENEKWK------AKVIYGDTD 1453
GR +EK V + AKV+YGDTD
Sbjct: 721 TGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 757
Score = 47.4 bits (111), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 77/200 (38%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q +S IF + + IDHY+ P P+PG VPV+R +G T G C
Sbjct: 88 DPQTESLIF--QQLEIDHYVGPAQPVPGGP-------PPSRGSVPVLRAFGVTDEGFSVC 138
Query: 61 LHIHRALPYLYVPC---------------------------------ADIPVQL--RQED 85
HIH PY Y P A + V+L R+
Sbjct: 139 CHIHGFAPYFYTPAPPGFGPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRESM 198
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L L + R+ + + +R G S P+E+++ F ++
Sbjct: 199 FGYHGHGPSPFLRITLALPRLVAPARRLLEQG--IRVAGLGT---PSFAPYEANVDFEIR 253
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 254 FMVDADIVGCNWLELPAGKY 273
>gi|307203676|gb|EFN82660.1| DNA polymerase delta catalytic subunit [Harpegnathos saltator]
Length = 1054
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 237/510 (46%), Gaps = 66/510 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
+LS +++ R + P+ ++D + +A + + +S+ + I+ C +
Sbjct: 260 FRILSFDIECAGREGIFPEAKHDPVIQIANMVIKQGESEPFLRNIFTFGTCAP------I 313
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG C+V KE + + + DPDI G++I +L RA HL +
Sbjct: 314 VG---CQVLSFEKESLMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRAQHLNV----- 365
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
S G N+ S++ + + GR ++ GR
Sbjct: 366 --------------QNFSFLGRIKNI-------RSVIKDHVLQSKQLGRRENKSINFEGR 404
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ + KL Y++ AV+ L+ + + + +T +G + R R Y +
Sbjct: 405 VPFDLLLVLVRDYKLRSYSLNAVSYHFLQEQKEDVQHKDITG-LQNGNAQTRRRLAVYCL 463
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L I E+ARV G+ S+L+RG Q +V S LLR ++YL
Sbjct: 464 KDAYLPLRLLDKLMCIIIYMEMARVTGVSISSLLTRGQQIKVVSQLLRKTREKDYLMPVH 523
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
H Q V+EP+ G+Y DP+ LDF SLYPS+++A+NLC+ T L +K
Sbjct: 524 QGHGTDEQFEGGT---VIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLLT---IAK 577
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+ L + +D++ P+ ++V VRKG+LP +LE +L+ R K +
Sbjct: 578 KKELNIP------------EDDVNTTPSNSLFVKSSVRKGILPEILENLLAARKKAKVEL 625
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
K+ + + ++ + RQ ALK+ AN YG+T A G++PC E++ + GR+ +E+
Sbjct: 626 KQ--ETDPLKQKVLDGRQYALKVSANSVYGFTGAQM-GKLPCLEISAGVTAYGRTMIERT 682
Query: 1434 ISFVNEN------EKWKAKVIYGDTDRYTV 1457
V E+ K A VIYGDTD V
Sbjct: 683 KQEVEEHFRIENGYKNDAIVIYGDTDSVMV 712
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 43/196 (21%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + + + + IDHY+ P+PG + G K+ VP++R++G T G C H+H
Sbjct: 37 PQIDTLAFQQIEIDHYIGKPLPG-------MPGSKLGPVPIMRMFGITEQGNSVCCHVHG 89
Query: 66 ALPYLYV------------PCADIPVQLRQED-----DGYMHAISLALEKALK--VKGSA 106
PYL+V P + Q ++D + AI LA+E K + G
Sbjct: 90 FCPYLFVLAPSKFTNYHCKPFKEALNQAVKKDMKSNPNNIQEAI-LAVELVYKQSMYGYT 148
Query: 107 GSKR-----------QHVHECS-LVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGM 154
G ++ + + C L+ VF+ + ES+I F ++F+VD ++ G
Sbjct: 149 GEEKLPFLKITVAVPRLIAPCKRLLEQDTVYTVFNHHYKAFESNIDFDIRFMVDTSVVGC 208
Query: 155 GHLHLS----KLKFRH 166
+ L KL+ +H
Sbjct: 209 CWIELKPKTWKLRGQH 224
>gi|327352438|gb|EGE81295.1| DNA polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 1106
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 150/513 (29%), Positives = 240/513 (46%), Gaps = 71/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+ D + NVV + ++VL C S
Sbjct: 308 LRILSFDIECAGRKGVFPEANQDPVIQIANVVT-RYGESKPFVRNVFVLDTC-------S 359
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
L I + ++F E + + L DPD+++G++I +L +RA HL +
Sbjct: 360 L--IVNTQLFEFDAEEKMLMAWRDFLEEVDPDVIIGYNIANFDFPYLLKRAEHLKCSGFH 417
Query: 1073 DISRTP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
SR + S++ GD+ S + I G + ++
Sbjct: 418 FWSRLKHIASRV--GDARFSSKQI-------------------------GNRESKSTNIS 450
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GRI L++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y
Sbjct: 451 GRIQLDLLQLIQRDYQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTPD-SRRRLAVY 509
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q +
Sbjct: 510 CLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFLSQLFRKALEQQLVIP 569
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ N + Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 570 NLRNESTSEQYEGAT---VIEPIRDYYDVPIATLDFASLYPSIIQAHNLCYTTLL----- 621
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
K++T+ D H +++ +D ++ PNG + KVRKG+L ++LEE+L R K+
Sbjct: 622 -KKSTI-------DTHQMKEGED-YIVTPNGDRFCTSKVRKGLLTQILEELLGAR---KR 669
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A K+LA + + N RQLALK+ AN YG T A GR+PC +A S GR +
Sbjct: 670 AKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GRLPCLPIASSTTSYGRQMI 728
Query: 1431 EK------AISFVNENEKWKAKVIYGDTDRYTV 1457
EK A + AKV+YGDTD V
Sbjct: 729 EKTKEEVEAKFTIANGYSHDAKVVYGDTDSVMV 761
>gi|261200399|ref|XP_002626600.1| DNA polymerase delta subunit [Ajellomyces dermatitidis SLH14081]
gi|239593672|gb|EEQ76253.1| DNA polymerase delta subunit [Ajellomyces dermatitidis SLH14081]
Length = 1106
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 150/513 (29%), Positives = 240/513 (46%), Gaps = 71/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+ D + NVV + ++VL C S
Sbjct: 308 LRILSFDIECAGRKGVFPEANQDPVIQIANVVT-RYGESKPFVRNVFVLDTC-------S 359
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
L I + ++F E + + L DPD+++G++I +L +RA HL +
Sbjct: 360 L--IVNTQLFEFDAEEKMLMAWRDFLEEVDPDVIIGYNIANFDFPYLLKRAEHLKCSGFH 417
Query: 1073 DISRTP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
SR + S++ GD+ S + I G + ++
Sbjct: 418 FWSRLKHIASRV--GDARFSSKQI-------------------------GNRESKSTNIS 450
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GRI L++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y
Sbjct: 451 GRIQLDLLQLIQRDYQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTPD-SRRRLAVY 509
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q +
Sbjct: 510 CLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFLSQLFRKALEQQLVIP 569
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ N + Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 570 NLRNESTSEQYEGAT---VIEPIRDYYDVPIATLDFASLYPSIIQAHNLCYTTLL----- 621
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
K++T+ D H +++ +D ++ PNG + KVRKG+L ++LEE+L R K+
Sbjct: 622 -KKSTI-------DTHQMKEGED-YIVTPNGDRFCTSKVRKGLLTQILEELLGAR---KR 669
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A K+LA + + N RQLALK+ AN YG T A GR+PC +A S GR +
Sbjct: 670 AKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GRLPCLPIASSTTSYGRQMI 728
Query: 1431 EK------AISFVNENEKWKAKVIYGDTDRYTV 1457
EK A + AKV+YGDTD V
Sbjct: 729 EKTKEEVEAKFTIANGYSHDAKVVYGDTDSVMV 761
>gi|392589878|gb|EIW79208.1| hypothetical protein CONPUDRAFT_138364 [Coniophora puteana RWD-64-598
SS2]
Length = 1096
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 237/510 (46%), Gaps = 65/510 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
L +LS +++ R + P+ + D + +A + + +S + I+ L C SH +
Sbjct: 300 LRVLSFDIECAGRKGIFPEAQVDPVIQIANMVTIQGESQPFIRNIFTLNTC---SH---I 353
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG +V + E + + + + + DPD+++G++I +L +RA HLG
Sbjct: 354 VG---SQVMSFNDEAEMLNAWSQFIAEVDPDVIIGYNISNFDFPYLFDRAKHLGAKQFPQ 410
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
R + A D+ S + +G+ + + GR
Sbjct: 411 FGRMKGWAA-AIKDTHFSSKA-------------------------FGQRDSKEALIHGR 444
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ L+V + M+ E KL YT+ +V L + + V+T+ GP +R R Y +
Sbjct: 445 LQLDVLQFMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITELQNGGP-ESRRRLAVYCL 503
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L +M++L E+ARV G+ F +LSRG +V S L R A+ + Y AI P
Sbjct: 504 KDAYLPQRLMDKLMCFVNYIEMARVTGVPFNYLLSRGQSIKVLSQLYRRANEEGY-AI-P 561
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
S E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 562 AFKGEGSDEQYEG-ATVIEPKKGYYDAPIATLDFSSLYPSIMMAHNLCYTTLLDKKTIDR 620
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
L +++D+ + + PN + K+RKG+LP +LE+++ R K +
Sbjct: 621 ------------LELVKDV--DYIQTPNNDFFATAKMRKGLLPSILEDLIGARKRAKADL 666
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK- 1432
KK + + + RQLALK+ AN YG+T A G++PC ++ S GR +EK
Sbjct: 667 KK--ETDTFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLPISSSTTSYGRQMIEKT 723
Query: 1433 -----AISFVNENEKWKAKVIYGDTDRYTV 1457
A + A+VIYGDTD V
Sbjct: 724 KQEVEAEFCIANGHAHNAEVIYGDTDSVMV 753
>gi|150866455|ref|XP_001386065.2| DNA polymerase delta catalytic subunit (DNA polymerase III)
[Scheffersomyces stipitis CBS 6054]
gi|149387711|gb|ABN68036.2| DNA polymerase delta catalytic subunit (DNA polymerase III)
[Scheffersomyces stipitis CBS 6054]
Length = 1070
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 233/513 (45%), Gaps = 72/513 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A S H +S R++ +
Sbjct: 275 LRILSFDIECAGRKGIFPEAEHDPVIQIANVV---SKHG---------ESRPFVRNVFTV 322
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C ++F KE + ++ + S D D+++G++ + +L +RA LG+
Sbjct: 323 NTCSPIIGSQIFEHEKEEDMLMNWKDFVVSVDADVIIGYNTANFDIPYLLDRAKALGLRN 382
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
SR SK A DS S R +G +++
Sbjct: 383 FPFFSRLK-NSKQEAKDSVFSSRA-------------------------YGTRENKVVNI 416
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ L++ + ++ E KL YT+ +V+ L + + ++T +G R R
Sbjct: 417 DGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITD-LQNGTSETRRRLAV 475
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++++L + +E+ARV G+ F +L+RG Q +V S L R ++
Sbjct: 476 YCLKDAYLPLRLLDKLMCLVNYTEMARVTGVPFSYLLARGQQIKVISQLFRKCLEED--I 533
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
+ P + E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 534 VIPNMKSEGTNEEYEG-ATVIEPSRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---- 588
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
N + +F +D+ PNG +V ++G+LP +L E+L+ R K
Sbjct: 589 ----NIQTIKAFNL-------TEDDYTRTPNGDYFVKDHKKQGILPTILNELLTARKKAK 637
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+KK + + N RQLALK+ AN YG+T A G++PC ++ S+ GR +
Sbjct: 638 ADLKK--ETDPFKRDVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGREMI 694
Query: 1431 EKAISFVNE------NEKWKAKVIYGDTDRYTV 1457
EK + V E + A+VIYGDTD V
Sbjct: 695 EKTKNEVQEFYSKKNGYPYDAQVIYGDTDSVMV 727
>gi|262176855|gb|ACY27482.1| DNA polymerase delta [Xenopus laevis]
Length = 1108
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 229/508 (45%), Gaps = 75/508 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R + P+P D + N+V E D ++ L C S +V
Sbjct: 316 VLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQGEKDP-FIRNVFTLGTCAS------IV 368
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G +V +E L + + + DPDI+ G++IQ + +L RA L +
Sbjct: 369 G---SQVLCFEREDALLKAWAEFVRIIDPDIITGYNIQNFDMPYLINRAQTL------KV 419
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
S P +I + S I + + GR ++ GR+
Sbjct: 420 STFPFLGRIRSLKSVIRDSSFQSKQM--------------------GRRENKVINTEGRV 459
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y +
Sbjct: 460 QFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 518
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L + E+ARV G+ +LSRG Q +V S LLR A Q+ +
Sbjct: 519 DAYLPLRLLEKLMCVINYMEMARVTGVPLSYLLSRGQQIKVVSQLLRQAMKQDLVMPVVR 578
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 579 SEGGEDYTG-------ATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL----- 626
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ ++ P ++ + P G +V VRKG+LP +LE +L R K
Sbjct: 627 -QSGSVEKYGLNP---------EDFIKTPTGDCFVKASVRKGLLPEILENLLCARKRAKT 676
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 677 ELKK--ETDPFKQKVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIE 733
Query: 1432 KAISFV------NENEKWKAKVIYGDTD 1453
K V + K AKVIYGDTD
Sbjct: 734 KTKQLVESKYTLDNGYKADAKVIYGDTD 761
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
+ P + V +DHY+ + G + G VP+IR++G T G C HI
Sbjct: 83 TDPKEQHLCFQQVELDHYVGSHVSG-------MLGATKGPVPIIRMFGITEEGNSVCCHI 135
Query: 64 HRALPYLYVPC---------ADIPVQL--------RQEDDGYMHAISLALEKALK--VKG 104
H PY YVPC +D +L R DG A+ LA++ K + G
Sbjct: 136 HGFAPYFYVPCHTGFKQEDLSDFKKELNTAVIKDMRSNKDGISQAV-LAVDVCHKENMYG 194
Query: 105 SAGSKRQHVHECSLV---------RAKKGGAVFDKS---LQPHESHIPFLLQFLVDYNLY 152
G + + ++ R + G F + Q +E++I F ++F+VD ++
Sbjct: 195 YHGKRIMPFMKITMALPRLIAPAKRLLEQGLRFGRQPTHYQAYEANIDFEIRFMVDNDIV 254
Query: 153 GMGHLHLSKLKFR 165
G + L K+R
Sbjct: 255 GCNWIELPAGKYR 267
>gi|118400060|ref|XP_001032353.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
gi|89286694|gb|EAR84690.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 1124
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 204/455 (44%), Gaps = 66/455 (14%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI-----G 1069
IP C V E L + K L + DPDI +G++I ++ ER L I G
Sbjct: 353 NIPGCIVKSFKTETELLLEWEKFLQNVDPDIFLGYNITNFDFPYILERGKQLKINNGKYG 412
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
+ I T ++I G G+ D ++
Sbjct: 413 FMGRIKNTI--TRIKDGKYLSKAMGMRD---------------------------TKEMN 443
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
GRI L++ M E KL+ Y++ +V+ L + + ++ G R R
Sbjct: 444 FEGRIQLDMMMHMHRETKLSSYSLNSVSYHFLNEQKEDVHHTQIS-GLQKGDAETRKRLA 502
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A+L L++M +L I +E+ARV G+ + +RG Q +V S L R N
Sbjct: 503 VYCLKDAQLPLKLMQKLMCIYNYTEMARVTGVPINFLFTRGQQIKVASQLYRRTKLLNLY 562
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
P E V++P+ GFY P+ LDF SLYPS+M+A+NLC+ T + K
Sbjct: 563 I--PTERSQGQGDKFEG-AFVLQPKKGFYDKPIATLDFASLYPSIMMAHNLCYSTLISKN 619
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
+ N KD+ + P+G + P VR+G+LP +L+++L+ R
Sbjct: 620 VAMSMN-----------------KDDYTLTPHGDYFAKPHVRQGILPDILKDLLAAR--- 659
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A +LA L + + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 660 KKAKNELAKETDPLRKAVLDGRQLALKISANSVYGFTGAQV-GQLPCLEISSSVTSFGRQ 718
Query: 1429 TLEKAISFV-NENEK-----WKAKVIYGDTDRYTV 1457
+E FV N K + + VIYGDTD V
Sbjct: 719 MIEATRDFVLNHYNKANGYNYDSDVIYGDTDSVMV 753
>gi|239607450|gb|EEQ84437.1| DNA polymerase delta subunit [Ajellomyces dermatitidis ER-3]
Length = 1106
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 150/513 (29%), Positives = 240/513 (46%), Gaps = 71/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+ D + NVV + ++VL C S
Sbjct: 308 LRILSFDIECAGRKGVFPEANQDPVIQIANVVT-RYGESKPFVRNVFVLDTC-------S 359
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
L I + ++F E + + L DPD+++G++I +L +RA HL +
Sbjct: 360 L--IVNTQLFEFDAEEKMLMAWRDFLEEVDPDVIIGYNIANFDFPYLLKRAEHLKCSGFH 417
Query: 1073 DISRTP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
SR + S++ GD+ S + I G + ++
Sbjct: 418 FWSRLKHIASRV--GDARFSSKQI-------------------------GNRESKSTNIS 450
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GRI L++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y
Sbjct: 451 GRIQLDLLQLIQRDYQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTPD-SRRRLAVY 509
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q +
Sbjct: 510 CLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFLSQLFRKALEQQLVIP 569
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ N + Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 570 NLRNESTSEQYEGAT---VIEPIRDYYDVPIATLDFASLYPSIIQAHNLCYTTLL----- 621
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
K++T+ D H +++ +D ++ PNG + KVRKG+L ++LEE+L R K+
Sbjct: 622 -KKSTI-------DTHQMKEGED-YIVTPNGDRFCTSKVRKGLLTQILEELLGAR---KR 669
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A K+LA + + N RQLALK+ AN YG T A GR+PC +A S GR +
Sbjct: 670 AKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GRLPCLPIASSTTSYGRQMI 728
Query: 1431 EK------AISFVNENEKWKAKVIYGDTDRYTV 1457
EK A + AKV+YGDTD V
Sbjct: 729 EKTKEEVEAKFTIANGYSHDAKVVYGDTDSVMV 761
>gi|147899700|ref|NP_001087694.1| DNA-directed DNA polymerase delta 1 [Xenopus laevis]
gi|51895814|gb|AAH81093.1| Pold protein [Xenopus laevis]
Length = 1109
Score = 179 bits (453), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 229/508 (45%), Gaps = 75/508 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R + P+P D + N+V E D ++ L C S +V
Sbjct: 317 VLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQGEKDP-FIRNVFTLGTCAS------IV 369
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G +V +E L + + + DPDI+ G++IQ + +L RA L +
Sbjct: 370 G---SQVLCFEREDALLKAWAEFVRIIDPDIITGYNIQNFDMPYLINRAQTL------KV 420
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
S P +I + S I + + GR ++ GR+
Sbjct: 421 STFPFLGRIRSLKSVIRDSSFQSKQM--------------------GRRENKVINTEGRV 460
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
++ +++ + KL YT+ AV+ L+ + + ++T +G + R R Y +
Sbjct: 461 QFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 519
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L + E+ARV G+ +LSRG Q +V S LLR A Q+ +
Sbjct: 520 DAYLPLRLLEKLMCVINYMEMARVTGVPLSYLLSRGQQIKVVSQLLRQAMKQDLVMPVVR 579
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 580 SEGGEDYTG-------ATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL----- 627
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ ++ P ++ + P G +V VRKG+LP +LE +L R K
Sbjct: 628 -QSGSVEKYGLNP---------EDFIKTPTGDCFVKASVRKGLLPEILENLLCARKRAKT 677
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 678 ELKK--ETDPFKQKVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIE 734
Query: 1432 KAISFV------NENEKWKAKVIYGDTD 1453
K V + K AKVIYGDTD
Sbjct: 735 KTKQLVESKYTLDNGYKADAKVIYGDTD 762
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 40/194 (20%)
Query: 4 SQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
+ P + V +DHY+ + G + G VP+IR++G T G C HI
Sbjct: 83 TDPKEQHLCFQQVELDHYVGSHVSG-------MLGATKGPVPIIRMFGITEEGNSVCCHI 135
Query: 64 HRALPYLYVPC---------ADIPVQL--------RQEDDGYMHAISLALEKALK--VKG 104
H PY YVPC +D +L R DG A+ LA++ K + G
Sbjct: 136 HGFAPYFYVPCHTGFKQEDLSDFKKELNTAVIKDMRSNKDGISQAV-LAVDVCHKENMYG 194
Query: 105 SAGSKRQHVHECSLV---------RAKKGGAVFDK----SLQPHESHIPFLLQFLVDYNL 151
G + + ++ R + G F + Q +E++I F ++F+VD ++
Sbjct: 195 YHGKRIMPFMKITMALPRLIAPAKRLLEQGLRFGRHPIHCYQAYEANIDFEIRFMVDNDI 254
Query: 152 YGMGHLHLSKLKFR 165
G + L K+R
Sbjct: 255 VGCNWIELPAGKYR 268
>gi|408397517|gb|EKJ76659.1| hypothetical protein FPSE_03209 [Fusarium pseudograminearum CS3096]
Length = 1104
Score = 179 bits (453), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 238/505 (47%), Gaps = 63/505 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A + + + +C E+ I
Sbjct: 305 LRILSFDIECAGRKGIFPEANHDPVIQIANIVTKYGEKKPFVRNV-FCLQETS-----SI 358
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ KE + S + K L DPDI+ G++I +L +RA HL + +R
Sbjct: 359 VATQILAYEKEEKMLSDWQKFLIRTDPDIITGYNISNFDFPYLLDRAKHLKVAGFEYWTR 418
Query: 1077 TP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
P ++S+ A ++ S + + G + GR+
Sbjct: 419 IPSMQSR--AKETNFSSK-------------------------QMGNRDTKATNTNGRLQ 451
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y +
Sbjct: 452 LDLLQLIQRDHQLRSYTLNSVCANFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKD 510
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + P
Sbjct: 511 AYLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQKL--VIPNL 568
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
AS E V+EP G+Y P+ LDF SLYPS+M A+NLC+ T + K
Sbjct: 569 KSEASDEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLVSK------- 620
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ +F ++ +D ++ ++ PNG +V K RKG+L ++LEE+LS R KQA ++
Sbjct: 621 -KAIEAF----NLQKD--EDYIVTPNGDTFVTIKQRKGLLAQILEELLSAR---KQAKRE 670
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + N RQLALK+ AN YG T A +G++PC E+A S GR +EK
Sbjct: 671 LAVETDPFKKAVLNGRQLALKISANSVYGLTGAT-TGKLPCLEIASSTTSFGRKMIEKTK 729
Query: 1435 SFVN------ENEKWKAKVIYGDTD 1453
V A+VIYGDTD
Sbjct: 730 EEVEGRYNIANGYSHDAQVIYGDTD 754
>gi|324120710|dbj|BAJ78746.1| DNA polymerase delta catalytic subunit [Karoophasma biedouwense]
Length = 992
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 232/509 (45%), Gaps = 78/509 (15%)
Query: 959 LLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSLVG 1015
+LS +++ R + P+P D I + + + ++ L C +VG
Sbjct: 205 ILSFDIECAGRKGIFPEPNVDPVIQIANMVIQQGQQEPFIRNVFTLDSCAP------IVG 258
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
C+V KE + + + DPD+ G++I +L RA HL + +
Sbjct: 259 ---CQVLSHDKETGMLEKWADFVREVDPDVFTGYNINNFDFTYLINRAKHLNVKNFTYLG 315
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R IS V+ E +L + GR ++ GR+
Sbjct: 316 RI----------KNISS-----------VIKEQMLQ-----SKQMGRRENKHINFEGRVS 349
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ ++ + KL YT+ +V+ L+ + +P ++T G R R Y +
Sbjct: 350 FDLLLVLLRDYKLRSYTLNSVSFHFLQEQKEDVPHNIITD-LQHGTDVTRRRLAVYCLKD 408
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL----AI 1251
A L L ++++L E+ARV G+ +L+RG Q +V S LLR A + YL +
Sbjct: 409 AYLPLRLLDKLMCFINYMEMARVTGVPLSCLLTRGQQIKVVSQLLRKAKDRGYLIPAYSG 468
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+P + Q V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+ T L +
Sbjct: 469 APQDEQFEGAT-------VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLRQ--G 519
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+K+ S PD + P ++V VRKG+LP +LE +L+ R K
Sbjct: 520 AKD------SLTPDQYTK---------TPASNLFVKASVRKGLLPEILENLLAARKKAKA 564
Query: 1372 AIK-KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+K + P +Q ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 565 DLKLETDPFKQ---KVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRVMI 620
Query: 1431 EKAISFVNEN------EKWKAKVIYGDTD 1453
E+ V + + A VIYGDTD
Sbjct: 621 EQTKQEVEQQFNVANGYQHDAVVIYGDTD 649
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 33/158 (20%)
Query: 34 SSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCAD----------------- 76
S + G +V VPV+R+YG T G C H+H PY +V D
Sbjct: 6 SGMPGAQVGPVPVMRIYGVTMDGNSVCCHVHGFSPYFFVSAPDNFTEDHCYPFMAALNKA 65
Query: 77 IPVQLRQEDDGYMHAISLALEKALK--VKGSAGSKRQHVHECSLVRAKKGGA---VFDKS 131
+ LR + A+ LA+E + V G G + + ++ + A + ++
Sbjct: 66 VIADLRSNKEEIQEAV-LAVEIVSRQTVFGYWGEGKTNFLRITVALPRLIAAAKRLLERE 124
Query: 132 L----------QPHESHIPFLLQFLVDYNLYGMGHLHL 159
L QP ES+I F ++F+VD + G + L
Sbjct: 125 LVYPPLGTYDYQPFESNIDFDIRFMVDTQMVGCSWVEL 162
>gi|324120746|dbj|BAJ78764.1| DNA polymerase delta catalytic subunit [Neocolochelyna itoi]
Length = 1003
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 236/512 (46%), Gaps = 74/512 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R + P+ +D + +A V+ + +E R++ +
Sbjct: 211 ILSFDIECAGRKGIFPEASHDPVIQIANM------------VIRHGDTEPFLRNVFTLDT 258
Query: 1019 C------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
C +V KE + + + DPD+ G++I +L RA HL + +
Sbjct: 259 CAPIIGSQVLSFQKEAIMLEKWADFVRQCDPDVFTGYNINNFDFPYLINRAQHLKVKSFS 318
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ R I D +S++ + + GR ++ G
Sbjct: 319 YLGR------------------IKD--------IKSVIKDQVLQSKQMGRRENKHVNFEG 352
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ ++ + KL YT+ AV+ L+ + + ++T +G + R R Y
Sbjct: 353 RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITD-LQNGNPQTRRRLAVYC 411
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++++L I E+ARV G+ S+L++G +V S LLR A + YL +
Sbjct: 412 LKDAYLPLRLLDKLMCIINYMEMARVTGVSLCSLLTKGQGVKVVSQLLRKARERGYLMPT 471
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
HQ V+EP+ G+Y DP+ LD+ SLYPS+++A+N+C+ T LG P+
Sbjct: 472 ---HQGQGTDEQYEGATVIEPKRGYYNDPIATLDYSSLYPSIIMAHNICYTTLLG---PA 525
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ H L+ +D+ P M+V VRKG+LP +LE +L+ R K
Sbjct: 526 TQ------------HKLKLTEDKYTRTPTTAMFVKSSVRKGLLPEILENLLTARKAAKTE 573
Query: 1373 IK-KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K + P +Q ++ + RQLALK+ AN YG+T A +G++PC E++ S GR +E
Sbjct: 574 LKNEKDPFKQ---KVLDGRQLALKVSANSVYGFTGAQ-NGKLPCLEISSSTTAYGREMIE 629
Query: 1432 KAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+ V + K A VIYGDTD V
Sbjct: 630 QTKQEVEQRYCVANGYKHDAVVIYGDTDSVMV 661
Score = 43.9 bits (102), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 53/168 (31%)
Query: 34 SSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLY---------------------- 71
+ + G KV VP++R+YG T G C H+H PYL+
Sbjct: 6 AGMPGSKVGPVPIMRMYGVTMEGNSVCCHVHGFCPYLFVTAPENFNNSHCKPFREALNKA 65
Query: 72 -----------VPCADIPVQLRQEDDGYMHA---------ISLALEKALKVKGSAGSKRQ 111
VP A + V++ Q+ Y +A I++AL K + A KR
Sbjct: 66 VLADMRSNNDKVPEAILVVEIVQKQSMYGYAGEDLVPFLKITVALPKLI-----APCKR- 119
Query: 112 HVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHL 159
+ E V G ++ Q +ES+I F ++F+VD ++ G + L
Sbjct: 120 -LLEKETVFPTFGNHIY----QAYESNIDFDIRFMVDTSVVGCSWIKL 162
>gi|46125595|ref|XP_387351.1| hypothetical protein FG07175.1 [Gibberella zeae PH-1]
Length = 1104
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 238/505 (47%), Gaps = 63/505 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A + + + +C E+ I
Sbjct: 305 LRILSFDIECAGRKGIFPEANHDPVIQIANIVTKYGEKKPFVRNV-FCLQETS-----SI 358
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ KE + S + K L DPDI+ G++I +L +RA HL + +R
Sbjct: 359 VATQILAYEKEEKMLSDWQKFLIRTDPDIITGYNISNFDFPYLLDRAKHLKVAGFEYWTR 418
Query: 1077 TP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
P ++S+ A ++ S + + G + GR+
Sbjct: 419 IPSMQSR--AKETNFSSK-------------------------QMGNRDTKATNTNGRLQ 451
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y +
Sbjct: 452 LDLLQLVQRDHQLRSYTLNSVCANFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKD 510
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + P
Sbjct: 511 AYLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQKL--VIPNL 568
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
AS E V+EP G+Y P+ LDF SLYPS+M A+NLC+ T + K
Sbjct: 569 KSEASDEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLVSK------- 620
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ +F ++ +D ++ ++ PNG +V K RKG+L ++LEE+LS R KQA ++
Sbjct: 621 -KAIEAF----NLQKD--EDYIVTPNGDTFVTIKQRKGLLAQILEELLSAR---KQAKRE 670
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + N RQLALK+ AN YG T A +G++PC E+A S GR +EK
Sbjct: 671 LAVETDPFKKAVLNGRQLALKISANSVYGLTGAT-TGKLPCLEIASSTTSFGRKMIEKTK 729
Query: 1435 SFVN------ENEKWKAKVIYGDTD 1453
V A+VIYGDTD
Sbjct: 730 EEVEGRYNIANGYSHDAQVIYGDTD 754
>gi|240278554|gb|EER42060.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus H143]
Length = 1053
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 240/515 (46%), Gaps = 75/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y +S+ R++ +
Sbjct: 313 LRILSFDIECAGRKGVFPEANQDPVIQIANV------------VTRYGESKPFIRNVFVL 360
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V ++ E + + L DPD+++G++I +L +RA HL
Sbjct: 361 GTCSLIVNTQLLEFDTEEKMLMAWKNFLVEVDPDVIIGYNIANFDFPYLLKRAEHLKCSG 420
Query: 1071 LNDISRTP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
+ SR + S++ GD+ S + I G + +
Sbjct: 421 FHFWSRLKHIPSRV--GDARFSSKQI-------------------------GNRESKSTN 453
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GRI L++ +L++ + +L YT+ +V L + + ++T+ F P +R R
Sbjct: 454 ISGRIQLDLLQLVQRDYQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTPD-SRRRLA 512
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q +
Sbjct: 513 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQQLV 572
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ N + Q V+EP FY P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 573 IPNLRNESTSEQYEGAT---VIEPIRDFYDVPIATLDFASLYPSIIQAHNLCYTTLL--- 626
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K++T+ D H +++ +D ++ PNG + KVRKG+L ++LEE+L R
Sbjct: 627 ---KKSTI-------DAHQMKEGED-YIVTPNGDRFCTSKVRKGLLTQILEELLGAR--- 672
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 673 KRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLPIASSTTSYGRQ 731
Query: 1429 TLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + AKV+YGDTD V
Sbjct: 732 MIEKTKEEVEAKYTIANGYSHDAKVVYGDTDSVMV 766
>gi|324120726|dbj|BAJ78754.1| DNA polymerase delta catalytic subunit [Tenodera aridifolia]
Length = 1030
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 234/512 (45%), Gaps = 74/512 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSLVG 1015
+LS +++ R + P+P +D I + + S ++ L C
Sbjct: 240 ILSFDIECAGRKGVFPEPEHDPVIQIANMVIRQGSKEPFIRNVFTLDTCAP--------- 290
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I +V +KE + + + DPDIL G++I + +L RA HL +
Sbjct: 291 IIGSQVLSFAKESEMLEKWAAFVREVDPDILTGYNINNFDIPYLINRANHLKANNFTYLG 350
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLHVGGRI 1134
R + R + KD +++ + GR ++ GR+
Sbjct: 351 RIK------------NTRSVI---------------KDTVLQSKQMGRRENKSVNFEGRV 383
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
++ ++ + KL YT+ AV+ L + + ++ +G R R Y +
Sbjct: 384 PFDLLFVLLRDYKLRSYTLNAVSFHFLGEQKEDVHHSIIAD-LQNGNATTRRRLAVYCLK 442
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--AIS 1252
A L L+++ +L I E+ARV G+ S+L+RG Q +V S LLR A + Y+ A
Sbjct: 443 DAFLPLKLLEKLMCIINYMEMARVTGVSLPSLLTRGQQIKVVSQLLRKAREKGYVIPAYG 502
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
G + + A V+EP+ G+YADP+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 503 GGVQEEQYEGAT-----VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLQS---G 554
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
LG++ D+ + P +V VRKG+LP +LE +L+ R K
Sbjct: 555 PREKLGLTP------------DQYIKTPASNYFVTKSVRKGLLPEILENLLAARKKAKAD 602
Query: 1373 IK-KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K + P +Q ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E
Sbjct: 603 LKNEKDPFKQ---KVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIE 658
Query: 1432 KAISFVNENEKWK------AKVIYGDTDRYTV 1457
+ V ++ A+V+YGDTD V
Sbjct: 659 QTKQEVEQHYNRSNGYENDAEVVYGDTDSVMV 690
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P+ + + + IDHY P PG + G + VP++R+YG T G C H+H
Sbjct: 18 PNQDCLVFQQLEIDHYTGTPKPG-------MPGSQQGPVPIMRMYGVTSEGHSVCCHVHG 70
Query: 66 ALPYLYV 72
PYL+V
Sbjct: 71 FSPYLFV 77
>gi|171693865|ref|XP_001911857.1| hypothetical protein [Podospora anserina S mat+]
gi|170946881|emb|CAP73685.1| unnamed protein product [Podospora anserina S mat+]
Length = 1108
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 238/509 (46%), Gaps = 64/509 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ ++DS+ +A D + + + S I
Sbjct: 310 LRILSFDIECAGRKGIFPEAQHDSVIQIANIVTKYGDKKPFVRNVFCLDTTS------PI 363
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ E + + + L DPDI++G++I +L +RA HL + SR
Sbjct: 364 VATQILEFKDEGKMLAAWRDFLEKVDPDIIIGYNIANFDFPYLLDRAKHLKVHNFEYWSR 423
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
T ++S A ++ S + + G + GR+ L
Sbjct: 424 THVKS--VAKETNFSSK-------------------------QMGNRDTKATNTNGRLQL 456
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y + A
Sbjct: 457 DLLQLVQRDHQLRSYTLNSVCAHFLGEQKEDVHHSMITELFEGTP-ESRRRLALYCLKDA 515
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q + P
Sbjct: 516 YLPQRLMDKLSCLENYTEMARVTGVPFNFLLARGQQVKFLSQLFRKALEQKL--VIPNMR 573
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+S+ E V+EP G+Y P+ LDF SLYPS++ A+NLC+ T + K
Sbjct: 574 SESSEEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTTLIKK-------- 624
Query: 1317 LGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
D+ +KDE ++ PNG M+V K RKG+L ++LEE+LS R K+A ++
Sbjct: 625 -------KDIERWSLVKDEDYIVTPNGDMFVTTKKRKGLLAQILEELLSAR---KEAKRE 674
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + N RQLALK+ AN YG T A +G++PC E+A S GR +E+
Sbjct: 675 LAAETDPFKKAVLNGRQLALKISANSVYGLTGAT-NGKLPCLEIASSTTAFGRQMIERTK 733
Query: 1435 SFVNENEKWK------AKVIYGDTDRYTV 1457
V E K A+VIYGDTD V
Sbjct: 734 HEVEERYCIKNGYSHDAQVIYGDTDSVMV 762
>gi|156407049|ref|XP_001641357.1| predicted protein [Nematostella vectensis]
gi|156228495|gb|EDO49294.1| predicted protein [Nematostella vectensis]
Length = 1092
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 232/511 (45%), Gaps = 71/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+ +LS +++ R + P+ D + N+V E D ++ L C
Sbjct: 300 VRILSFDIECAGRKGIFPEAEKDPVIQIANMVIRQGEKDP-FIRNVFTLGGCAP------ 352
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG V KE LF + + + DPDI+ G++I L +L RA L + N
Sbjct: 353 IVG---SHVLSFDKEADLFKAWSEFVQECDPDIITGYNIVNFDLPYLLNRATALHV---N 406
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ S +L V +S + +G+ +++ G
Sbjct: 407 NFS-----------------------LLGRIVADKSTVTSTTFQSKAYGKRENKVINISG 443
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ ++ + KL YT+ AV+ L+ + + +++ +G + R R Y
Sbjct: 444 RVQFDLLHVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHNIISD-LQNGNDQTRRRLAIYC 502
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++ +L + E+ARV G+ +LSRG Q +V S LLR H Q L I
Sbjct: 503 MKDAILPLRLLEKLMCVINYMEMARVTGVPMGYLLSRGQQIKVMSQLLRKTH-QTDLVIP 561
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
+ + A V+EP G+Y P+ LDF SLYPS+M+A+NLC+ + L PS
Sbjct: 562 AHKAEAGEEYAGAT---VIEPNKGYYNIPIATLDFSSLYPSIMMAHNLCYTSLLH---PS 615
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ V PD ++ P+G +V VRKG+LP +LE +L+ R K
Sbjct: 616 Q-----VKETPPDQYIK---------TPSGNFFVKKSVRKGLLPEILEHLLTARKKAKAD 661
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR +E+
Sbjct: 662 LKK--ETDPFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISQSVTAFGRMMIER 718
Query: 1433 AISFVN------ENEKWKAKVIYGDTDRYTV 1457
V K AKVIYGDTD V
Sbjct: 719 TKELVEAKYTVANGYKTDAKVIYGDTDSVMV 749
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 40/218 (18%)
Query: 5 QPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIH 64
+P S+ + + +++Y+ P+ G + G KV VP+IR++G T G HIH
Sbjct: 69 EPASDNIQFQQLDVENYIGTPLLG-------MPGSKVGPVPIIRMFGVTMDGNSVLCHIH 121
Query: 65 RALPYLYVP---------CA------DIPV--QLRQEDDGYMHAISLALEKALK--VKGS 105
+PY +VP C+ D V +R DG A+ LA++ ++ + G
Sbjct: 122 GFVPYFFVPAPPGFQEIHCSLFRDTLDKAVLNDMRSNRDGVTQAV-LAVDYMMRESIYGY 180
Query: 106 AGSKRQHVHECSLVRAK-------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLY 152
+ + + ++ K + G ++ +ES+I + ++F+VD ++
Sbjct: 181 HKNTKIPFLKVTVALQKLIAPAKRILETGFRCGHYPERGYSTYESNIDYEVRFMVDSDIV 240
Query: 153 GMGHLHLSKLKFRHPVPDAFFPRKFNYSSKQASADFQV 190
G + L K+R P+ R + + ++ +V
Sbjct: 241 GCNWIELPAGKYRVRTPNGIASRYRSSAKPESRCQLEV 278
>gi|324120738|dbj|BAJ78760.1| DNA polymerase delta catalytic subunit [Anacanthocoris striicornis]
Length = 1091
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 230/506 (45%), Gaps = 62/506 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R + P+P D + +A +H I + KS I
Sbjct: 299 ILSFDIECAGRKGIFPEPNQDPVIQIANMVVCQGEHEPFIRNIFTLKS------CAPILG 352
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
+V E L + + + DPD+ G++I +L RA HL
Sbjct: 353 SQVISFEDERELLEKWAEFVREVDPDLFTGYNINNFDFPYLINRANHLKC---------- 402
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLHVGGRIVLN 1137
S G N+ + + KD II+ + GR ++ GR +
Sbjct: 403 ---------SHFVYLGRIKNIKS--------IVKDHIIQSKQMGRRENKLINFEGRTSFD 445
Query: 1138 VWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAK 1197
+ ++ + KL YT+ AV+ L+ + + +++ +G + R R Y + A
Sbjct: 446 LLLVLLRDYKLRSYTLNAVSFNFLQEQKEDVHHSIISD-LQNGNEQTRRRLAVYCLKDAY 504
Query: 1198 LNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQ 1257
L ++++++L + E+ARV G+ ++L+RG Q +V S LLR + YL + H+
Sbjct: 505 LPIKLLDKLMCVINYMEMARVTGVSLSALLTRGQQIKVMSQLLRKSMESGYLLPT---HR 561
Query: 1258 VASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTL 1317
V V+EP G+Y DP+ LDF SLYPS+MIA+NLC+ T I + N L
Sbjct: 562 VNDSSEQFEGATVIEPLKGYYKDPIATLDFSSLYPSIMIAHNLCYSTL---IHAQQRNAL 618
Query: 1318 GVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA 1377
G+S D+ P +V VRKG+LP++LE +L+ R K +K
Sbjct: 619 GLSP------------DQYSTTPCENYFVKTSVRKGLLPQILESLLTARKKAKFDLKN-- 664
Query: 1378 PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
+ ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +E+ V
Sbjct: 665 ETDPFKRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISGSVTAYGRTMIERTKQEV 723
Query: 1438 NEN------EKWKAKVIYGDTDRYTV 1457
+ K+ + V+YGDTD V
Sbjct: 724 EQRYCIKNGYKFDSIVVYGDTDSVMV 749
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
PD + S + + IDHY+ P P ++ G + VP++R+YG T G C H+H
Sbjct: 74 PDVDGISFQQLEIDHYIGYPAP-------NMPGSQWPPVPIMRMYGVTMEGNSVCCHVHG 126
Query: 66 ALPYLYV 72
PY YV
Sbjct: 127 FTPYFYV 133
>gi|315042333|ref|XP_003170543.1| DNA polymerase delta catalytic subunit [Arthroderma gypseum CBS
118893]
gi|311345577|gb|EFR04780.1| DNA polymerase delta catalytic subunit [Arthroderma gypseum CBS
118893]
Length = 1112
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 238/511 (46%), Gaps = 66/511 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R + PDP D + +A + ++V+ C S
Sbjct: 313 LRILSFDIECAGRKGIFPDPNIDPVIQIANIVTRYGESKPFVRNVFVMDTCSS------- 365
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I + +V +E + + + DPD+++G++I +L ERA HL +
Sbjct: 366 --IVNTQVLEFEQEEKMLMAWRDFVERVDPDVIIGYNIANFDFPYLLERAEHL------N 417
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ P +++ S+ + K + + G+ + + GR
Sbjct: 418 CLKFPYWTRLKGVPSQAT--------------------KTSFASKQMGKRDSKATNTNGR 457
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I L++ +L++ + L YT+ +V L + + ++T+ + P +R R Y +
Sbjct: 458 IQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITELYNGTPD-SRRRLAVYCL 516
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q +
Sbjct: 517 KDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLARGQQIKFISQLFRKALEQKLVIPDL 576
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
N + ++Q V+EP +YA P+ LDF SLYPS++ A+NLC+ T L K K
Sbjct: 577 KNDENSNQQYEGA--TVIEPVRDYYAVPIATLDFASLYPSIIQAHNLCYTTLLNKRTVEK 634
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
LG+ ++ ++ PN M+ K+RKG+L ++LEE+L+ R K+A
Sbjct: 635 ---LGLKK-----------GEDYIVTPNDDMFCTTKIRKGLLSQILEELLTAR---KRAK 677
Query: 1374 KKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
++LA + + + N RQLALK+ AN YG T A +G++PC +A S GR +EK
Sbjct: 678 RELAIEKDPFKKAVLNGRQLALKISANSVYGITGAT-NGKLPCLPIASSTTSYGRQMIEK 736
Query: 1433 ------AISFVNENEKWKAKVIYGDTDRYTV 1457
A ++ AKVIYGDTD V
Sbjct: 737 TKEEVEARYTISNGYAHDAKVIYGDTDSVMV 767
>gi|258566822|ref|XP_002584155.1| DNA polymerase delta catalytic subunit [Uncinocarpus reesii 1704]
gi|237905601|gb|EEP80002.1| DNA polymerase delta catalytic subunit [Uncinocarpus reesii 1704]
Length = 834
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 234/515 (45%), Gaps = 75/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y +S+ R++ +
Sbjct: 310 LRILSFDIECAGRKGVFPEAHQDPVIQIANI------------VTRYGESKPFVRNVFVL 357
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V ++ E + + L DPD+++G++I +L +RA HL
Sbjct: 358 DTCSLIVNTQILEFDDERKMLMAWKDFLQKVDPDVIIGYNIANFDFPYLLDRAKHL---- 413
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
D S P S++ + S+ + + + G +
Sbjct: 414 --DCSGFPYWSRLKSAISQSKDSNFSSKQM--------------------GNRDTKSTNT 451
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GRI L++ +L++ + +L YT+ +V L + + ++T+ F P +R R
Sbjct: 452 NGRIQLDLLQLVQRDHQLRSYTLNSVCSHFLGEQKEDVHHTMITELFNGTPD-SRRRLAV 510
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A QN
Sbjct: 511 YCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNYLLSRGQQVKFISQLFRKALEQNL-- 568
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
+ P + E V+EP +Y P+ LDF SLYPS++ A+NLC+ T L K
Sbjct: 569 VIPNLRNEGGEEQYEG-ATVIEPVRDYYDVPIATLDFASLYPSIIQAHNLCYTTLLNKTS 627
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K L+ KDE ++ PNG M+ VRKG+L ++LEE+LS R
Sbjct: 628 VEK---------------LKLKKDEDYIVTPNGDMFCTAHVRKGLLSQILEELLSAR--- 669
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A K+LA + + N RQLALK+ AN YG T A +G++PC +A S GR
Sbjct: 670 KRAKKELAVETDPFKKAVLNGRQLALKISANSVYGITGAS-NGKLPCLAIASSTTSYGRQ 728
Query: 1429 TLEKAISFVNENEKWK------AKVIYGDTDRYTV 1457
+E+ V + AKVIYGDTD V
Sbjct: 729 MIERTKDEVEKRYTIANGYAHDAKVIYGDTDSVMV 763
>gi|367037701|ref|XP_003649231.1| hypothetical protein THITE_2107682 [Thielavia terrestris NRRL 8126]
gi|346996492|gb|AEO62895.1| hypothetical protein THITE_2107682 [Thielavia terrestris NRRL 8126]
Length = 1103
Score = 178 bits (451), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 236/509 (46%), Gaps = 64/509 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ ++D++ +A D + + + S I
Sbjct: 305 LRILSFDIECAGRKGIFPEAKHDAVIQIANIVTKYGDKKPFVRNVFCLDTTSP------I 358
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ +E + + L DPDI+ G++I +L +RAAHL + SR
Sbjct: 359 VATQILSFDREEDMLLAWRDFLEKVDPDIITGYNIANFDFPYLLDRAAHLKVRGFEYWSR 418
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
T ++S A D+ S + + G + GR+ L
Sbjct: 419 THVKS--VAKDTSFSSK-------------------------QMGNRDTKATNTNGRLQL 451
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y + A
Sbjct: 452 DLLQLIQRDHQLRSYTLNSVCSHFLGEQKEDVHHSMITELFEGTP-ESRRRLALYCLKDA 510
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q + P
Sbjct: 511 YLPQRLMDKLSCLENYTEMARVTGVPFNFLLARGQQVKFLSQLFRKALEQKL--VIPNLR 568
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+S+ E V+EP G+Y P+ LDF SLYPS++ A+NLC+ T + K
Sbjct: 569 SESSEEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTTLIKK-------- 619
Query: 1317 LGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
D+ KDE ++ PNG M+V K RKG+L ++LEE+L+ R KQA K+
Sbjct: 620 -------KDIEKWGLKKDEDYIVTPNGDMFVTTKQRKGLLSQILEELLAAR---KQAKKE 669
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + N RQLALK+ AN YG T A +G++PC E+A S GR +EK
Sbjct: 670 LAAETDPFKKAVLNGRQLALKISANSVYGLTGAT-NGKLPCLEIASSTTSFGRQMIEKTK 728
Query: 1435 SFVNEN------EKWKAKVIYGDTDRYTV 1457
V + A+VIYGDTD V
Sbjct: 729 QEVEKRYCIANGYSHDAQVIYGDTDSVMV 757
>gi|156093327|ref|XP_001612703.1| DNA polymerase delta catalytic subunit [Plasmodium vivax Sal-1]
gi|148801577|gb|EDL42976.1| DNA polymerase delta catalytic subunit, putative [Plasmodium vivax]
Length = 1096
Score = 178 bits (451), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 203/455 (44%), Gaps = 63/455 (13%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
IP V E L + + + DPD L G++I L ++ R L + L
Sbjct: 358 SIPGSNVIWFHDEKTLLDAWSEFITRLDPDFLTGYNIINFDLPYILNRGTALNLKKLK-- 415
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
ML S++ + + ++G +++ GRI
Sbjct: 416 ------------------------MLGRIKSISSVVKESSFSSKQFGTHETKEININGRI 451
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+V+ L++ + KL YT+ V+ L+ + + + ++ P +R R Y +
Sbjct: 452 QFDVYDLIKRDYKLKSYTLNYVSFEFLKEQKEDVHYSIMNDLQNESP-ESRKRIATYCIK 510
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
L L ++++L I E+ARV G F +L+RG Q +V S L R NY + P
Sbjct: 511 DGILPLRLIDKLLFIYNYVEMARVTGTPFVYLLTRGQQIKVTSQLYRKCKELNY--VIPS 568
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ + V+EP G+Y +P+ LDF SLYPS+MIA+NLC+ T + K
Sbjct: 569 TYIKSGSNEKYEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLV------KN 622
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNG---VMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
N + LK E + G + +V V+KG+LP ++EE++ R VK
Sbjct: 623 NA-----------EIEGLKQEDVTSIQGKSNIKFVKRSVKKGILPLIVEELIDARKKVKL 671
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
IK +I + N RQLALK+ AN YGYT A G++PC E+A SI GR ++
Sbjct: 672 LIKN--EQNKITKMVLNGRQLALKISANSVYGYTGAASGGQLPCLEVAVSITTLGRCMID 729
Query: 1432 KAISFVNENEKWKAK---------VIYGDTDRYTV 1457
K V EK+ +K V+YGDTD V
Sbjct: 730 KTKETV---EKYYSKSNGFEHNSTVVYGDTDSVMV 761
>gi|358401350|gb|EHK50656.1| hypothetical protein TRIATDRAFT_53190 [Trichoderma atroviride IMI
206040]
Length = 1103
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 228/512 (44%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + + S I
Sbjct: 304 LRILSFDIECAGRKGIFPEADMDPVIQIANVVTKYGEKKPFIRNVFCLDTTS------SI 357
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ KE + + + L DPD++ G++I +L +RA HL + SR
Sbjct: 358 VATQILDYEKEEKMLHEWQQFLVRVDPDVITGYNISNFDFPYLLDRAKHLKVQGFEYWSR 417
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P + S + + T + G + GR+ L
Sbjct: 418 IP------SKPSRVKDTNFTSKQI--------------------GSRDTKTTNTNGRLQL 451
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + L YT+ +V L + + ++T+ F P +R R Y + A
Sbjct: 452 DMLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKDA 510
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA--ISPG 1254
L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + I+P
Sbjct: 511 YLPQRLMDKLSCMENYTEMARVTGVPFNFLLSRGQQIKFVSQLFRKALEQKLVIPNIAPQ 570
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ + A V+EP G+Y P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 571 GTEAQYEGAT-----VIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTTLL-------- 617
Query: 1315 NTLGVSSFRP-DLHVLRDLKD-ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
RP D + KD + +I PNG +V RKG+L ++LEE+LS R KQA
Sbjct: 618 --------RPGDAERFKLEKDVDYIITPNGDQFVTAAKRKGLLAQILEELLSAR---KQA 666
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
++LA + + N RQLALK+ AN YG T A +G++PC +A S GR +E
Sbjct: 667 KRELAQETDPFKKAVLNGRQLALKVSANSVYGLTGAT-TGKLPCLAIASSTTSFGRQMIE 725
Query: 1432 KAISFVNENEKWK------AKVIYGDTDRYTV 1457
K V E A+VIYGDTD V
Sbjct: 726 KTKREVEERYNIANGYAHDAQVIYGDTDSVMV 757
>gi|426354275|ref|XP_004044593.1| PREDICTED: DNA polymerase zeta catalytic subunit [Gorilla gorilla
gorilla]
Length = 2921
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 168/326 (51%), Gaps = 43/326 (13%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL PDP +D I
Sbjct: 2228 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2287
Query: 982 NVVALAFENDS-------DHAVEIYVL-----LYCKSESHQRSLV---GIPDCKVFVCSK 1026
+ +D+ + V+ ++ + +Q L+ GI +V +
Sbjct: 2288 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAAD 2347
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E LF I+ +DPDIL+G++IQ S G+L +RAA L I L ISR P
Sbjct: 2348 EKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP-------- 2399
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
D +I R AE DE+G S +++ GRI LN+WR+MR EV
Sbjct: 2400 DDKIENR----------FAAE---------RDEYGSYTMSEINIVGRITLNLWRIMRNEV 2440
Query: 1147 KLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQL 1206
L YT E V+ VL ++ P FRVL+ WF + R++ V++ V R + NL+++ QL
Sbjct: 2441 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2500
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQ 1232
D+I +TSE+AR+FGI F VL+RGSQ
Sbjct: 2501 DLIGKTSEMARLFGIQFLHVLTRGSQ 2526
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 73/142 (51%), Gaps = 35/142 (24%)
Query: 55 AGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHV 113
+ QKTCLH+H PYLYVP Q+ + Y+ ++ ++++AL V G+ S QHV
Sbjct: 14 SSQKTCLHLHGIFPYLYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHV 69
Query: 114 HECSLVRAK------------------------------KGGAVFDKSLQPHESHIPFLL 143
+ SLV + GA+ +K QPHE+HIP+LL
Sbjct: 70 FKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLL 129
Query: 144 QFLVDYNLYGMGHLHLSKLKFR 165
Q +DYNLYGM ++L+ +KFR
Sbjct: 130 QLFIDYNLYGMNLINLAAVKFR 151
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 1389 ARQLALKLIANVTYGYTAAG-FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKV 1447
AR ++ + +T G FS R+ + + DSIV R TLE+AI VN+ +KW A+V
Sbjct: 2510 ARLFGIQFLHVLTRGSQVGNQFSCRLESS-VGDSIVHKARETLERAIKLVNDTKKWGARV 2568
Query: 1448 IYGDTDRYTVCI 1459
+YGDTD V +
Sbjct: 2569 VYGDTDSMFVLL 2580
>gi|410982334|ref|XP_003997512.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 1 [Felis
catus]
Length = 1111
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 236/509 (46%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV +E + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 362 PILGAKVQSYEREEELLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 413
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P +++ S I + + GR + + +
Sbjct: 414 -KVESFPFLGRVSGLRSTIRDSSFQSK--------------------QTGRRDSKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A + L
Sbjct: 512 CLKDAFLPLRLLERLMVLVNAMEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMREGLLMP 571
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
V V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 572 VVKTEGVEDYTGAT----VIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 624
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG++ +D+ + P G +V VRKG+LP++LE +LS R K+
Sbjct: 625 GAAQKLGLT------------EDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR---KR 669
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 670 AKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 728
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 729 EKTKQLVESKYTVENGYGTSAKVVYGDTD 757
>gi|335290039|ref|XP_003127412.2| PREDICTED: DNA polymerase delta catalytic subunit [Sus scrofa]
Length = 1107
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 238/512 (46%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV +E + +S+FI+++ DPD++ G++IQ L +L RA L
Sbjct: 362 PILGAKVQSYEREEDLLQAWSNFIRVM---DPDVITGYNIQNFDLPYLISRAQTL----- 413
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P +++ S I + + GR + + +
Sbjct: 414 -KVQTFPFLGRVSGLRSNIRDSSFQSK--------------------QTGRRDSKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 512 CLKDAFLPLRLLERLMVLVNAMEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMREGLLMP 571
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 572 VVKTEGGEDYTGA-------TVIEPLKGYYDVPITTLDFSSLYPSIMMAHNLCYTTLL-- 622
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG+++ D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 623 -RPGAAQKLGLTA------------DQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR-- 667
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 668 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGR 725
Query: 1428 STLEKAISFVNENEKWK------AKVIYGDTD 1453
+EK V + AKV+YGDTD
Sbjct: 726 QMIEKTKQLVESKYTVENGYGTSAKVVYGDTD 757
Score = 45.8 bits (107), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 76/200 (38%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG S VPV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPARPLPGAPPPSQS-------SVPVLRAFGVTDDGVSVC 138
Query: 61 LHIHRALPYLYVPC---------------------------------ADIPVQL--RQED 85
HIH PY Y P A + V+L R+
Sbjct: 139 CHIHGFAPYFYTPAPPGFGPEHLSDLQRELNAAISRDQRGGKELTGPAVLAVELCSRESM 198
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L L + R+ + + V + S P+E+++ F ++
Sbjct: 199 FGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRV-----AGLGTPSFAPYEANVDFEIR 253
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 254 FMVDADVVGCNWLELPAGKY 273
>gi|396082048|gb|AFN83661.1| DNA polymerase catalytic subunit delta [Encephalitozoon romaleae
SJ-2008]
Length = 959
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 235/506 (46%), Gaps = 72/506 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LSI+++ S G+ P + D I + + +D + +I+ L +
Sbjct: 178 LKILSIDIECISAGNSFPSSKSDPIIQIGNTLMLLGSDKHVSQDIFCL---------KET 228
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
GIP V+ E L + K DPDI++G++I+G + ++ +R LGI +
Sbjct: 229 TGIPGANVYWYDSEKELLESWKKYFMEIDPDIIVGYNIKGFDIPYILDRGEVLGINNFSI 288
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R+ K D+ +S NM +G + + + GR
Sbjct: 289 LGRS--RKKAKTRDTTMS-----SNM--------------------FGSISTTEVEIDGR 321
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+++++ ++R + KL Y++ +V+ L+ + +P + + S R R Y +
Sbjct: 322 LIVDMMIVIRRDYKLRSYSLNSVSIHFLKEQKEDVPPSSIGE-LQSKDKDTRRRIASYCL 380
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
L L + + L+++ +EL+RV G+ +RG+ ++ +++ R A +++ I P
Sbjct: 381 RDTVLPLRLFSTLNVLINYTELSRVTGVPIEYFFTRGTAIKIFALIYRTAAKEDF--IVP 438
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
S + E V+EP+ GFY PV V+DF SLYPS+MI+ NLC+ T L K
Sbjct: 439 EIDPFESNKSFEG-GFVIEPKRGFYNKPVSVMDFSSLYPSIMISNNLCYTTLLTK----- 492
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
VL +K P + + +KG+LPR+L ++L +R +K+ +
Sbjct: 493 ----------EQYRVLGGIK-----TPTDNYFCSAETKKGLLPRILIDLLDSRKRIKEEL 537
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK L N RQLA+KL AN YG+T A GR+PC E++ S+ GR +
Sbjct: 538 KK--EKDPALKACLNGRQLAVKLCANSLYGFTGAS-KGRLPCFEISQSVTGFGREMINFT 594
Query: 1434 ISFVNENEKWK------AKVIYGDTD 1453
+ + EN K + VIYGDTD
Sbjct: 595 KNLIEENFSKKNGYTHDSVVIYGDTD 620
>gi|410982336|ref|XP_003997513.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 2 [Felis
catus]
Length = 1109
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 236/509 (46%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 308 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 359
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV +E + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 360 PILGAKVQSYEREEELLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 411
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P +++ S I + + GR + + +
Sbjct: 412 -KVESFPFLGRVSGLRSTIRDSSFQSK--------------------QTGRRDSKVVSMV 450
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 451 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 509
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A + L
Sbjct: 510 CLKDAFLPLRLLERLMVLVNAMEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMREGLLMP 569
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
V V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 570 VVKTEGVEDYTGAT----VIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 622
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG++ +D+ + P G +V VRKG+LP++LE +LS R K+
Sbjct: 623 GAAQKLGLT------------EDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR---KR 667
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 668 AKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 726
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 727 EKTKQLVESKYTVENGYGTSAKVVYGDTD 755
>gi|1840091|gb|AAB47255.1| DNA polymerase delta' [Mesocricetus auratus]
Length = 1102
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 230/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 305 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 356
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + D D++ G++IQ L +L RA L +
Sbjct: 357 PILGAKVQSYEREEDLLQAWPNFILAMDSDVITGYNIQNFDLPYLISRAQTL------KV 410
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR+
Sbjct: 411 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVVSMVGRV 450
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 451 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLR 509
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A Q L
Sbjct: 510 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMRQGLLMPVVK 569
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 570 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 619
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 620 GAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 664
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 665 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAEV-GKLPCLEISQSVTGFGRQMI 723
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 724 EKTKQLVESKYTLENGYNANAKVVYGDTD 752
Score = 46.6 bits (109), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 75/198 (37%), Gaps = 52/198 (26%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGG---KVNEVPVIRVYGSTPAGQKTCLH 62
P++ + + IDHY+ +P L GG N VP++R +G T G C H
Sbjct: 84 PNTEPLIFQQLEIDHYVGSAVP--------LPGGPPTSCNSVPILRAFGVTDEGFSVCCH 135
Query: 63 IHRALPYLYVPC---------------------------------ADIPVQL--RQEDDG 87
IH PY Y P A + ++L R+ G
Sbjct: 136 IHGFAPYFYTPAPPGFGAEHLSDLQRELSTAISRDQRGGKELSGPAVLAIELCSRESMFG 195
Query: 88 YM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFL 146
Y H S L L + R+ + + +R G S P+E+++ F ++F+
Sbjct: 196 YHGHGPSPFLRITLALPRLVAPARRLLEQG--IRVPGLGT---PSFAPYEANVDFEIRFM 250
Query: 147 VDYNLYGMGHLHLSKLKF 164
VD ++ G L L K+
Sbjct: 251 VDADIVGCNWLELPAGKY 268
>gi|378726376|gb|EHY52835.1| DNA polymerase delta subunit 1 [Exophiala dermatitidis NIH/UT8656]
Length = 1107
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 235/513 (45%), Gaps = 71/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+ D + NVV + + ++VL C S
Sbjct: 308 LRILSFDIECAGRKGIFPEANQDPVIQIANVVT-KYGDSKPFIRNVFVLDTC-------S 359
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
L I + +++ E + + L DPD+++G++I +L +RA HL
Sbjct: 360 L--IVNTQIYEHDSESKMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDRAKHL------ 411
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ + P S++ + S+ + + + G + G
Sbjct: 412 KLQKFPYWSRLKSVVSQAKDTNFSSKQM--------------------GNRDTKATNTNG 451
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
RI L++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y
Sbjct: 452 RIQLDLLQLVQRDHQLRSYTLNSVCAHFLGEQKEDVHHTMITELFNGTPD-SRRRLAVYC 510
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q +
Sbjct: 511 LKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNYLLSRGQQVKFISQLFRKALEQQL--VI 568
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P S E V+EP G+Y P+ LDF SLYPS++ A+NLC+ T L K +
Sbjct: 569 PNERSEKSDEQYEG-ATVIEPIRGYYDVPIATLDFASLYPSIIQAHNLCYTTLLTKQIIE 627
Query: 1313 KENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
K N KDE ++ PNG ++ KVRKG+L ++LEE+L R K+
Sbjct: 628 KHNM---------------KKDEDYILTPNGDLFATAKVRKGLLTQILEELLGAR---KR 669
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A ++LA + + + N RQLALK+ AN YG T A G++PC +A S GR +
Sbjct: 670 AKRELAVEKDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLPIASSTTAYGRQMI 728
Query: 1431 EKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
EK V + A+VIYGDTD V
Sbjct: 729 EKTKHEVEQKYTIANGYSHDAQVIYGDTDSVMV 761
>gi|181620|gb|AAA58439.1| DNA polymerase-delta catalytic-subunit [Homo sapiens]
Length = 1107
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 236/512 (46%), Gaps = 79/512 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 362 PILGAKVQSYEKEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 413
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P ++A S I + + GR + +
Sbjct: 414 -KVQTFPFLGRVAGLCSNIRDSSFQSK--------------------QTGRRDTKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL +T+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSHTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 512 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMP 571
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 572 VVKSEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL-- 622
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 623 -RPGTAQKLGLT------------EDQFIRTPTGDEFVKTSVRKGLLPQILENLLSAR-- 667
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 668 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGR 725
Query: 1428 STLEKAISFVNENEKWK------AKVIYGDTD 1453
+EK V + AKV+YGDTD
Sbjct: 726 QMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 757
Score = 44.3 bits (103), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG VPV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPAQPVPGGP-------PPSRGSVPVLRAFGVTDEGFSVC 138
Query: 61 LHIHRALPYLYVP 73
HIH PY Y P
Sbjct: 139 CHIHGFAPYFYTP 151
>gi|301764899|ref|XP_002917866.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit-like [Ailuropoda melanoleuca]
Length = 1106
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 233/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 362 PILGAKVQSYEREEELLQAWSTFIRTMDPDVITGYNIQNFDLPYLISRAQTLKVHTF--- 418
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
P +++ S I + + GR + + + GR+
Sbjct: 419 ---PFLGRVSGLRSNIRDSSFQSK--------------------QTGRRDSKVVSMVGRV 455
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 456 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVYCLK 514
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 515 DAFLPLRLLERLMVLVNAMEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMREGLLMPVVK 574
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 575 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 624
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG++ +D+ + P G +V VRKG+LP++LE +LS R K+
Sbjct: 625 GAAQKLGLT------------EDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR---KR 669
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 670 AKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 728
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 729 EKTKQLVESKYTVENGYGANAKVVYGDTD 757
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 73/197 (37%), Gaps = 50/197 (25%)
Query: 6 PDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHI 63
P + + + IDHY+ P P+PG S VPV+R +G T G C HI
Sbjct: 89 PQTEPLIFQQLEIDHYVGPAQPLPGAPPPSCS-------SVPVLRAFGVTDEGVSVCCHI 141
Query: 64 HRALPYLYVPC---------------------------------ADIPVQL--RQEDDGY 88
H PY Y P A + V+L R+ GY
Sbjct: 142 HGFAPYFYTPAPPGFGSEHLGDLQRELNAAISRDQRGGKELTGPAVLSVELCSRESMFGY 201
Query: 89 M-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFLV 147
H S L L + R+ + + V + S P+E+++ F ++F+V
Sbjct: 202 HGHGPSPFLRITLALPRLMAPARRLLEQGIRV-----AGLGTPSFAPYEANVDFEIRFMV 256
Query: 148 DYNLYGMGHLHLSKLKF 164
D ++ G L L K+
Sbjct: 257 DTDIVGCNWLELPAGKY 273
>gi|390339587|ref|XP_003725042.1| PREDICTED: DNA polymerase delta catalytic subunit-like
[Strongylocentrotus purpuratus]
Length = 1696
Score = 177 bits (449), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 232/513 (45%), Gaps = 79/513 (15%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R + P+ D + N+V E D I+ L C +V
Sbjct: 906 ILSFDIECAGRKGIFPEAEKDPVIQIANMVIRQGERDP-FIRNIFTLNTCAP------IV 958
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G +V E + + + DPDIL G++IQ + +L RAA L +
Sbjct: 959 G---SQVMSFKTEHEMLQAWADFVREIDPDILTGYNIQNFDIPYLINRAAAL------RL 1009
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
SR P ++ S I + L G+ +++ GR+
Sbjct: 1010 SRFPFLGRLKNTKSVIRDVSFQSKQL--------------------GKRENKSVNMEGRV 1049
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
++ +++ + KL Y + AV+ L+ + + ++T +G + R R Y +
Sbjct: 1050 QFDLLQVVVRDYKLRSYRLNAVSYHFLQEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 1108
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL----A 1250
A L L ++++L + E+ARV G+ +LSRG Q +V S LLR A Q+ +
Sbjct: 1109 DAMLPLRLLDKLMSVINYMEMARVTGVPLTYLLSRGQQIKVVSQLLRKAKEQDLVMPAHK 1168
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
+ G+ V V++P G+Y P+ LDF SLYPS+M A+NLC+ T L
Sbjct: 1169 VETGDDFVGG--------YVLDPIRGYYDCPIATLDFSSLYPSIMQAHNLCYTTLLS--- 1217
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
PS + L D+ + P G +V +R+G+LP +LE++L+ R K
Sbjct: 1218 PSMKENLA--------------PDQYIKTPTGNYFVKKSIRRGILPEILEDLLTARKRAK 1263
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+KK + + R+ + RQLALK+ AN YG+T A G++PC E++ S GR +
Sbjct: 1264 ADLKK--ETDPLRKRVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSTTAFGRMMI 1320
Query: 1431 EKAISFVN-----EN-EKWKAKVIYGDTDRYTV 1457
+K V EN K +KVIYGDTD V
Sbjct: 1321 DKTRQLVETRYTVENGYKTTSKVIYGDTDSVMV 1353
>gi|358389733|gb|EHK27325.1| hypothetical protein TRIVIDRAFT_33534 [Trichoderma virens Gv29-8]
Length = 1105
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 230/512 (44%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + + S I
Sbjct: 306 LRILSFDIECAGRKGIFPEANVDPVIQIANVVTKYGEKKPFIRNVFCLDTTS------SI 359
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ KE + + + L DPDI++G++I +L +RA HL + SR
Sbjct: 360 VATQILDYEKEEQMLHEWQQFLVRVDPDIIIGYNISNFDFPYLLDRAKHLKVQGFEYWSR 419
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P + S++ E + + G + GR+ L
Sbjct: 420 IP------SKPSKVKETNFSSKQI--------------------GNRDTKTTNTNGRLQL 453
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + L YT+ +V L + + ++T+ F P +R R Y + A
Sbjct: 454 DMLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKDA 512
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA--ISPG 1254
L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + I+P
Sbjct: 513 YLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFVSQLFRKALEQKLVIPNIAPQ 572
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ + A V+EP G+Y P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 573 GTEDQYEGAT-----VIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTTLL-------- 619
Query: 1315 NTLGVSSFRP-DLHVLRDLKD-ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
RP D+ + KD + ++ PNG +V RKG+L ++LEE+LS R KQA
Sbjct: 620 --------RPGDVERFKLEKDVDYIVTPNGDSFVTATKRKGLLAQILEELLSAR---KQA 668
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
++LA + + N RQLALK+ AN YG T A +G++PC +A S GR +E
Sbjct: 669 KRELAQETDPFKKAVLNGRQLALKISANSVYGLTGAT-TGKLPCLAIASSTTSFGRQMIE 727
Query: 1432 KAISFVN------ENEKWKAKVIYGDTDRYTV 1457
K V A+VIYGDTD V
Sbjct: 728 KTKREVEMKYNIANGYTHDAQVIYGDTDSVMV 759
>gi|302803951|ref|XP_002983728.1| hypothetical protein SELMODRAFT_180322 [Selaginella moellendorffii]
gi|300148565|gb|EFJ15224.1| hypothetical protein SELMODRAFT_180322 [Selaginella moellendorffii]
Length = 984
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 238/505 (47%), Gaps = 59/505 (11%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R P+P +D + +A + + ++ KS S ++VG+ D
Sbjct: 195 ILSFDIECAGRKGHFPEPEHDPVIQIANLVTVQGESRPMVRNVMTLKSCS---AIVGV-D 250
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
F KE+ L + ++ DPDI++G++I + +L ERA LGI + R
Sbjct: 251 VMSFDTEKEVLL--AWRDLIREVDPDIIIGYNICKFDMPYLIERAQKLGIVEFPVLGRIR 308
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
S++ D+ S R ++G + + + GR+ ++
Sbjct: 309 -NSRVRVRDATFSSR-------------------------QYGIRESKEVLIEGRVQFDL 342
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
+ M+ + KL+ Y++ +V+ L + + ++ +G R R Y + A L
Sbjct: 343 LQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIIAD-LQNGNSETRRRLAVYCLKDAYL 401
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
++ +L I E+ARV G+ +LSRG +V S +LR +N++ + Q
Sbjct: 402 PQRLLEKLMFIYNYIEMARVTGVPISFLLSRGQSIKVLSQILRKCRQRNFV-VPNIKGQG 460
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLG 1318
A Q E V+E +GFY P+ LDF SLYPS+M+AYNLC+CT +
Sbjct: 461 AGQETFEG-ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVRT---------- 509
Query: 1319 VSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP 1378
D L + + P+G M+V + KG+LP +LEE+L+ R + +K+
Sbjct: 510 -----EDQARLNIAPENVNKTPSGEMFVKTNMEKGILPEILEELLAARKRARADLKEATD 564
Query: 1379 SQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV- 1437
S + + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E + V
Sbjct: 565 SLE--KAVLDGRQLALKVSANSVYGFTGATV-GQLPCLEISSSVTSYGRQMIEHTKTLVE 621
Query: 1438 ---NENEKW--KAKVIYGDTDRYTV 1457
N + K+ A+VIYGDTD V
Sbjct: 622 GRFNTSNKYDNNAEVIYGDTDSVMV 646
>gi|173384|gb|AAA35303.1| DNA polymerase delta [Schizosaccharomyces pombe]
Length = 1086
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 144/507 (28%), Positives = 237/507 (46%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L ++S +++ R + PDP D + +A D + ++C Q +VG
Sbjct: 294 LRIMSFDIECAGRKGVFPDPSIDPVIQIASIVTQYGD-STPFVRNVFCVDTCSQ--IVG- 349
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V+ + + S + K + DPD+L+G++I + +L +RA L I
Sbjct: 350 --TQVYEFQNQAEMLSSWSKFVRDVDPDVLIGYNICNFDIPYLLDRAKSL------RIHN 401
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
PL +I N + V E+ + A +G + + GR+ L
Sbjct: 402 FPLLGRI-------------HNFFS--VAKETTFSSKA-----YGTRESKTTSIPGRLQL 441
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ + KL Y++ AV L + + + ++T +G +R R Y + A
Sbjct: 442 DMLQVMQRDFKLRSYSLNAVCSQFLGEQKEDVHYSIITD-LQNGTADSRRRLAIYCLKDA 500
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +L+RG Q +V S L A Q+ L + N
Sbjct: 501 YLPQRLMDKLMCFVNYTEMARVTGVPFNFLLARGQQIKVISQLFCKA-LQHDLVVP--NI 557
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+V V+EP G+Y P+ LDF SLYPS+M A+NLC+ T L NT
Sbjct: 558 RVNGTDEQYEGATVIEPIKGYYDTPIATLDFSSLYPSIMQAHNLCYTTLL------DSNT 611
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ + D+ + + PNG +V P VRKG+LP +L ++L+ R K +KK
Sbjct: 612 AELLKLKQDV--------DYSVTPNGDYFVKPHVRKGLLPIILADLLNARKKAKADLKK- 662
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ + + RQLALK+ AN YG+T A +GR+PC ++ S+ GR +EK
Sbjct: 663 -ETDPFKKAVLDGRQLALKVSANSVYGFTGAT-NGRLPCLAISSSVTSYGRQMIEKTKDV 720
Query: 1437 VNENEKWK------AKVIYGDTDRYTV 1457
V + + + A VIYGDTD V
Sbjct: 721 VEKRYRIENGYSHDAVVIYGDTDSVMV 747
>gi|85014201|ref|XP_955596.1| DNA polymerase delta catalytic subunit [Encephalitozoon cuniculi
GB-M1]
gi|19171290|emb|CAD27015.1| DNA POLYMERASE DELTA CATALYTIC (LARGE) CHAIN [Encephalitozoon
cuniculi GB-M1]
gi|449329935|gb|AGE96202.1| DNA polymerase delta catalytic large chain [Encephalitozoon cuniculi]
Length = 974
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 235/510 (46%), Gaps = 72/510 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LSI+++ S G+ P + D I + + F ++S + +I+ L +
Sbjct: 193 LKVLSIDIECVSAGNGFPSSKCDPIIQIGNTLMLFGDNSYASQDIFCL---------KET 243
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
GIP V E L + K DPD+++G++++G + ++ R LGI +
Sbjct: 244 TGIPGVNVHWYETEKELLESWKKYFMELDPDVIVGYNVKGFDIPYILSRGEILGIESFSV 303
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R+ K D+ +S NM +G + + + GR
Sbjct: 304 LGRS--RKKARTRDTTMS-----SNM--------------------FGSITTTEVEIDGR 336
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+++++ ++R + KL Y++ +V+ L+ + +P+ + + S R R Y +
Sbjct: 337 LIIDMMVVIRRDFKLRSYSLNSVSIHFLKEQKEDVPYSSIGE-LQSKNKDTRRRIASYCL 395
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
L L + N L+++ +EL+RV G +RG ++ +++ R A ++++ P
Sbjct: 396 RDTVLPLRLFNTLNVLINYTELSRVTGTPIEYFFTRGMAIKIFTLVYRAASKEDFMI--P 453
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
S E V+EP GFY PV V+DF SLYPS+MI++NLC+ T L K +
Sbjct: 454 DIDPFESNKTFEG-GFVIEPRKGFYNKPVSVMDFSSLYPSIMISHNLCYTTLLTK---EQ 509
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
LG + P G + + +KG+LPR+L ++L++R +K+ +
Sbjct: 510 YRILGGTK-----------------TPTGNYFCSAERKKGLLPRILTDLLTSRKRIKEEL 552
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
++ S L N RQLA KL AN YG+T A G++PC E++ S+ GR +
Sbjct: 553 EREKDSA--LRACLNGRQLAFKLCANSLYGFTGAS-RGKLPCFEISQSVTGFGREMIILT 609
Query: 1434 ISFVNENEKWK------AKVIYGDTDRYTV 1457
+ EN K + VIYGDTD V
Sbjct: 610 KKLIEENFSRKNGYTHDSVVIYGDTDSVMV 639
>gi|431920730|gb|ELK18503.1| DNA polymerase delta catalytic subunit [Pteropus alecto]
Length = 1109
Score = 177 bits (448), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 233/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L RS
Sbjct: 310 LRVLSFDIECAGRKGIFPEPEQDPVIQICSLGLRWGEQEPFLRLALTL--------RSCA 361
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I +V +E L + + + DPDI+ G++IQ L +L RA L +
Sbjct: 362 PILGAQVQSYEREEELLQAWSTFIRTMDPDIITGYNIQNFDLPYLLSRAQIL------KV 415
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
P ++A S I + + GR + + GR+
Sbjct: 416 QGFPFLGRVAGLRSTIRDSSFQSK--------------------QTGRRDTKVVSMVGRV 455
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 456 QMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVYCLK 514
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A + L
Sbjct: 515 DAYLPLRLLERLMVLVNAMEMARVTGVPLSYLLARGQQVKVVSQLLRQAMREGLLMPVVK 574
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 575 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 624
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG++ +D+ + P G +V VRKG+LP++LE +LS R K+
Sbjct: 625 GTAQKLGLT------------EDQFIRTPTGDEFVKTSVRKGLLPQILENLLSAR---KR 669
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 670 AKAELARETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 728
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 729 EKTKQLVESKYTIESGYSANAKVVYGDTD 757
Score = 40.8 bits (94), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHY--MAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY +A P+ G + + VPV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGLARPLAGAPPPSN-------HSVPVLRAFGVTDEGVSVC 138
Query: 61 LHIHRALPYLYVPC---------------------------------ADIPVQL--RQED 85
HIH PY Y P A + V+L R+
Sbjct: 139 CHIHGFAPYFYTPAPPGFGPEHLSGLQQELNTAISRDHRGGKELTGPAVLAVELCSRESM 198
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L L + R+ + + VR G S P+E+++ F ++
Sbjct: 199 FGYHGHGPSPFLRITLALPRLVAPARRLLEQG--VRVVGLGT---PSFAPYEANVDFEIR 253
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 254 FMVDADIVGCNWLELPAGKY 273
>gi|84043446|ref|XP_951513.1| DNA polymerase delta catalytic subunit [Trypanosoma brucei TREU927]
gi|33348312|gb|AAQ15638.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359086|gb|AAX79533.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma brucei]
gi|261326367|emb|CBH09326.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1026
Score = 176 bits (447), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 236/504 (46%), Gaps = 67/504 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSE-SHQRSLVG 1015
+LSI+++ E R L P+ D + +A +H V Y K E + R++
Sbjct: 231 FRILSIDIECEGRKGLFPEAERDPVIQIA-------NHCVN-----YGKEEDALTRTIFT 278
Query: 1016 IPDCKVF----VCSKEIH--LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIG 1069
+ C VCS E + + + + DPD L G++I +L R L +
Sbjct: 279 LKSCGAIAGANVCSFETEEEMLVQWARFVKRIDPDFLTGYNICNFDFPYLLSRGITLKV- 337
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
ND +++ER + + + + G + L
Sbjct: 338 --ND--------SFFYWGRQLNERTVH--------------REKKFLSRQLGNREYTELT 373
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GR+V++V +++ + KL Y++ AV++ L + + +++ G R R
Sbjct: 374 MEGRVVMDVMAVIQRDYKLRAYSLNAVSQHFLGEQKEDVHHSIISD-LQQGNDETRRRLA 432
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L ++++ +L ++ E+ARV G+ +L RG Q +V SMLLR A +N+
Sbjct: 433 VYCLKDAYLPVKLLERLMVVVNNVEMARVTGVPIGWLLERGQQIKVFSMLLRKARARNF- 491
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ P ++ V+EP+ G Y +P+V LDF SLYPS++IA+NLC+ T +
Sbjct: 492 -VVPTVETTGAEQRRYEGATVIEPKKGHYIEPIVTLDFASLYPSIIIAHNLCYST----L 546
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
LP E S + D P ++ +V GVLP +L ++L+ R
Sbjct: 547 LPGHEVNNYESGMKED-------------TPTEHKFIRKEVFPGVLPEVLRDLLAARRQA 593
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
+ +K ++ + +++ N RQLALK+ AN YG+T A GR+PC EL+ ++ GR
Sbjct: 594 RALMKDVS-QDSLEYKVLNGRQLALKVSANSVYGFTGAQV-GRLPCLELSATVTSYGRRM 651
Query: 1430 LEKAISFVNENEKWKAKVIYGDTD 1453
+E+ FV E + A+VIYGDTD
Sbjct: 652 IEETKQFV-EKKYVGAEVIYGDTD 674
>gi|149757884|ref|XP_001493912.1| PREDICTED: DNA polymerase delta catalytic subunit [Equus caballus]
Length = 1107
Score = 176 bits (447), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 234/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 362 PILGAKVQSYEREEELLQAWSAFIRTMDPDVITGYNIQNFDLPYLISRAQTL------KV 415
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
S P +++ S I + + GR + + GR+
Sbjct: 416 SSFPFLGRVSGLRSNIRDSSFQSK--------------------QTGRRDTKVVSMVGRV 455
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 456 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNEQTRRRLAVYCLK 514
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + +
Sbjct: 515 DAFLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMREGLVMPVVK 574
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 575 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 624
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG++ +D+ + P G +V VRKG+LP++LE +LS R K+
Sbjct: 625 GAAQKLGLT------------EDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR---KR 669
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 670 AKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 728
Query: 1431 EKAISFV-----NEN-EKWKAKVIYGDTD 1453
E+ V EN AKV+YGDTD
Sbjct: 729 ERTKQLVESKYTTENGYSASAKVVYGDTD 757
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 75/200 (37%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG VPV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPAQPLPGAPT-------PSPGSVPVLRAFGVTDEGVSVC 138
Query: 61 LHIHRALPYLYVPC---------------------------------ADIPVQL--RQED 85
HIH PY Y P A + V+L R+
Sbjct: 139 CHIHGFAPYFYTPAPPGFGPEHLSDLQRELNVAISRDQRGGKELAGPAVLAVELCSRESM 198
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L L + R+ + + V + S P+E+++ F ++
Sbjct: 199 FGYQGHGPSPFLRITLALPRLMAPARRLLEQGIRV-----AGLGTPSFAPYEANVDFEIR 253
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 254 FMVDTDIVGCNWLELPAGKY 273
>gi|395331770|gb|EJF64150.1| hypothetical protein DICSQDRAFT_81194 [Dichomitus squalens LYAD-421
SS1]
Length = 1083
Score = 176 bits (447), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 231/507 (45%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A + I + S +H +VG
Sbjct: 287 LRILSFDIECAGRKGIFPEPHIDPVIQIANMVTRQGESKPFIRNVFTLNSCAH---IVG- 342
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V + E L + + + DPD+++G++I +L +RA L S+
Sbjct: 343 --SQVLSFTDEAELLVRWREFIEEVDPDVIIGYNISNFDFPYLLDRARAL------KASK 394
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P +IA + + + + E++L GR+ +
Sbjct: 395 FPYLGRIANKQTVTKDTHFSSKAFGQRDSKETVL--------------------DGRLQI 434
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ + M+ E KL YT+ +V L + + V+T+ +G +R R Y + A
Sbjct: 435 DILQYMQREYKLRSYTLNSVCAHFLGEQKEDVHHSVITE-LQNGTPESRRRLAVYCLKDA 493
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +L+RG +V S L R A+ Y + P
Sbjct: 494 YLPQRLMDKLMCFINYTEMARVTGVPFNYLLARGQSIKVLSQLFRKANDDGY--VVPALK 551
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 552 GEGSDEQYEG-ATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLDKATVDR--- 607
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
L ++RD+ + + PN ++V RKG+LP +LE+++S R K +KK
Sbjct: 608 ---------LGLVRDV--DYVQTPNNDLFVKSSRRKGLLPTILEDLISARKRAKADLKK- 655
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK---- 1432
+ + + RQLALK+ AN YG+T A G++PC ++ S+ GR +EK
Sbjct: 656 -ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAYGRQMIEKTKQE 713
Query: 1433 --AISFVNENEKWKAKVIYGDTDRYTV 1457
A + A VIYGDTD V
Sbjct: 714 VEAEYCIANGHDHDATVIYGDTDSVMV 740
>gi|5011|emb|CAA41968.1| catalytic subunit DNA polymerase delta [Schizosaccharomyces pombe]
Length = 1084
Score = 176 bits (447), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 144/507 (28%), Positives = 237/507 (46%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L ++S +++ R + PDP D + +A D + ++C Q +VG
Sbjct: 294 LRIMSFDIECAGRKGVFPDPSIDPVIQIASIVTQYGD-STPFVRNVFCVDTCSQ--IVG- 349
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V+ + + S + K + DPD+L+G++I + +L +RA L I
Sbjct: 350 --TQVYEFQNQAEMLSSWSKFVRDVDPDVLIGYNICNFDIPYLLDRAKSL------RIHN 401
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
PL +I N + V E+ + A +G + + GR+ L
Sbjct: 402 FPLLGRI-------------HNFFS--VAKETSFSSKA-----YGTRESKTTSIPGRLQL 441
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ + KL Y++ AV L + + + ++T +G +R R Y + A
Sbjct: 442 DMLQVMQRDFKLRSYSLNAVCSQFLGEQKEDVHYSIITD-LQNGTADSRRRLAIYCLKDA 500
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +L+RG Q +V S L A Q+ L + N
Sbjct: 501 YLPQRLMDKLMCFVNYTEMARVTGVPFNFLLARGQQIKVISQLFCKA-LQHDLVVP--NI 557
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+V V+EP G+Y P+ LDF SLYPS+M A+NLC+ T L NT
Sbjct: 558 RVNGTDEQYEGATVIEPIKGYYDTPIATLDFSSLYPSIMQAHNLCYTTLL------DSNT 611
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ + D+ + + PNG +V P VRKG+LP +L ++L+ R K +KK
Sbjct: 612 AELLKLKQDV--------DYSVTPNGDYFVKPHVRKGLLPIILADLLNARKKAKADLKK- 662
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ + + RQLALK+ AN YG+T A +GR+PC ++ S+ GR +EK
Sbjct: 663 -ETDPFKKAVLDGRQLALKVSANSVYGFTGAT-NGRLPCLAISSSVTSYGRQMIEKTKDV 720
Query: 1437 VNENEKWK------AKVIYGDTDRYTV 1457
V + + + A VIYGDTD V
Sbjct: 721 VEKRYRIENGYSHDAVVIYGDTDSVMV 747
>gi|367000613|ref|XP_003685042.1| hypothetical protein TPHA_0C04580 [Tetrapisispora phaffii CBS 4417]
gi|357523339|emb|CCE62608.1| hypothetical protein TPHA_0C04580 [Tetrapisispora phaffii CBS 4417]
Length = 1096
Score = 176 bits (447), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 236/512 (46%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P +DS+ NVV++A ++ + C
Sbjct: 314 LRILSFDIECAGRIGVFPEPEHDSVIQIANVVSIAGAK-RPFIRNVFTVDTCSP------ 366
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F KE + + + + DPD+++G++ L +L +RA L
Sbjct: 367 ---ITGSHIFSHEKEEDMLRQWREFVVKADPDVIIGYNTSNFDLPYLIDRAKAL------ 417
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
++ P ++ + E V ES + A +G + +++ G
Sbjct: 418 KVNEFPYFGRLVNVNQE---------------VKESTFSSKA-----YGTRSSKNVNIDG 457
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + + ++T +G R R Y
Sbjct: 458 RLQLDLLQFVQREYKLRSYTLNAVSAHFLGEQKEDVHYSIITD-LQNGDSETRRRLAVYC 516
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++ L + +E++RV G+ F +LSRG Q +V S L R + L +
Sbjct: 517 LKDAYLPLRLLENLMALVNYTEMSRVTGVPFSYLLSRGQQIKVVSQLFRKCLEIDTLIPN 576
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
G+ Q V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L +
Sbjct: 577 MGSQGSDEQYEGAT---VIEPIRGYYDLPIATLDFNSLYPSIMMAHNLCYTT-----LCN 628
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+E R DL L ++ +I PN +V K R G+LP +L E++S R K+A
Sbjct: 629 RETVQ-----RLDLK----LNEDYIITPNNDYFVTTKKRHGILPIILNELISAR---KRA 676
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
L + R + N RQLALK+ AN YG+T A G++PC ++ S+ GR +
Sbjct: 677 KNDLKNEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGRDMIM 735
Query: 1432 KAISFVNENEKWK------AKVIYGDTDRYTV 1457
+ V E K A V+YGDTD V
Sbjct: 736 TTKNAVQEKYSIKNGYKNDAVVVYGDTDSVMV 767
>gi|146421489|ref|XP_001486690.1| hypothetical protein PGUG_00067 [Meyerozyma guilliermondii ATCC 6260]
Length = 1075
Score = 176 bits (447), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 236/514 (45%), Gaps = 74/514 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ ++D + +A VL Y + R++ +
Sbjct: 283 LRILSFDIECSGRKGIFPEAQHDPVIQIANV------------VLKYGEQRPFIRNVFTV 330
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + S+ E + H+ + + DPD+++G++ L +L +RA LG+
Sbjct: 331 NTCASIIGSQILEHKTEEQMLLHWRQFIEESDPDVIIGYNTTNFDLPYLLDRANALGL-- 388
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLH 1129
P ++ + E+ KD++ +G ++
Sbjct: 389 ----KEFPYFGRLKSVRQEV---------------------KDSVFSSRAYGTRENKVVN 423
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GR+ L++ + ++ E KL YT+ +V+ L + + +++ +G R R
Sbjct: 424 IDGRMQLDLLQFVQREYKLRSYTLNSVSAHFLGEQKEDVQHTIISD-LQNGTRETRRRLA 482
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L + ++ +L + +E+ARV G+ F +L+RG Q +V S L R ++
Sbjct: 483 VYCLKDAYLPMRLLEKLMCLVNYTEMARVTGVPFSYLLARGQQIKVISQLFRKCLQED-- 540
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ P + E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 541 VVIPNMKSEGTNEEYEG-ATVIEPVRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLSK- 598
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
N++ + KD+ + PNG +V RKG+LP +L E++S R
Sbjct: 599 -----NSIAAFNLS---------KDDYTLTPNGDYFVKEHKRKGILPTILHELISARKKA 644
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + + N RQLALK+ AN YG+T A G++PC ++ S+ GR
Sbjct: 645 KVDLKN--ETDPFRKDVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGRVM 701
Query: 1430 LEKAIS-----FVNEN-EKWKAKVIYGDTDRYTV 1457
+E+ + + EN + A+VIYGDTD V
Sbjct: 702 IEETKNEVQSRYTTENGYDYDAQVIYGDTDSVMV 735
>gi|342179963|emb|CCC89437.1| putative DNA polymerase delta catalytic subunit [Trypanosoma
congolense IL3000]
Length = 1026
Score = 176 bits (447), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 237/501 (47%), Gaps = 65/501 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LSI+++ E R L P+ D + +A +H + V + ++ R++ +
Sbjct: 233 ILSIDIECEGRKGLFPEAEKDPVIQIA-------NHCINYGV----EGDALTRTVFTLNT 281
Query: 1019 C------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
C V E + +++ + DPDIL G+++ +L +R + L +
Sbjct: 282 CGPIAGANVHSYETEEEMLLAWLRFVKEIDPDILTGYNVCKFDFPYLLDRGSTLKVS--- 338
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+I+ER + + + G + L + G
Sbjct: 339 --------EAFHYWGRQINERTVH--------------REKKFQSRQMGNREYTELTMEG 376
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R++++ +++ + KL Y++ AV++ L + + +++ G R R Y
Sbjct: 377 RVIMDAMSVIQRDYKLRAYSLNAVSQHFLGEQKEDVHHSIISD-LQQGNDETRRRLAVYC 435
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L ++++++L ++ E+ARV G+ +L RG Q +V SMLLR A +N + +
Sbjct: 436 LKDAYLPVKLLDRLMVVVNNVEMARVTGVPIAWLLERGQQIKVFSMLLRKARARNLVVPT 495
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
N + Q E V+EP GFY P+V LDF SLYPS++IA+NLC+ T + +
Sbjct: 496 TENSGI-DQRGYEG-ATVIEPRKGFYNCPIVTLDFASLYPSIIIAHNLCYSTLVRQSEAD 553
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
K + KD + P G ++V V G+LP +L+++L+ R +
Sbjct: 554 KYD-----------------KDMISRTPTGHVFVRDNVFPGILPEVLQDLLAARKNARTL 596
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K ++P + +++ N RQLALK+ AN YG+T A GR+PC EL+ S+ GR +++
Sbjct: 597 MKDVSPD-SLEYKVLNGRQLALKVSANSVYGFTGAQI-GRLPCLELSSSVTGYGRMMIDE 654
Query: 1433 AISFVNENEKWKAKVIYGDTD 1453
FV E + A V+YGDTD
Sbjct: 655 TKRFV-ETQYQGAMVVYGDTD 674
>gi|198429892|ref|XP_002125320.1| PREDICTED: similar to Polymerase (DNA directed), delta 1, catalytic
subunit [Ciona intestinalis]
Length = 1064
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 231/512 (45%), Gaps = 70/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHA----VEIYVLLYCKSESHQRS 1012
+ +LS +++ R + P P DS+ +A + H I+ L C +
Sbjct: 269 IRILSFDIECAGRKGIFPVPNIDSVIQIASMVKCQGSHEEPFIKTIFTLNSCST------ 322
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG +VF E L F + + DPD++ G++IQ L +L RAAHL
Sbjct: 323 IVG---ARVFSFKTEEGLLQAFSDFVRAVDPDVISGYNIQNFDLPYLINRAAHL------ 373
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
++ P +I ++I E + G +++ G
Sbjct: 374 KVANFPFLGRIKKSVTKIKETKFQSKQM--------------------GSREMKQINMEG 413
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ +V+ + E KL YT+ AV+ L + + ++T+ G ++R R Y
Sbjct: 414 RVQFDVFVALLREQKLRSYTLNAVSFHFLGEQKEDVHHSIITE-LQHGNAQSRRRLAVYC 472
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA-I 1251
+ A L + ++++L I E+ARV G+ +L+RG +V S LLR + L +
Sbjct: 473 LKDALLPIRLLDKLMFIINYMEMARVTGVPLSYLLTRGQSIKVISQLLRKTKEADLLMPV 532
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P ++ A V++P G+Y P+ LDF SLYPS+M A+NLC+ T L K
Sbjct: 533 IPTSNDDEFTGAT-----VIDPIKGYYNQPITTLDFSSLYPSIMQAHNLCYTTLLRK--N 585
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
SKE L P ++ + P+G +V VRKG+LP +LE +L+ R K
Sbjct: 586 SKEKDL----LGP---------EDFIKTPSGDYFVKASVRKGLLPGILESLLTARTNAKA 632
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K + + RQLALK+ N YG+T A G++PC E++ S+ GR +E
Sbjct: 633 LMK--VEKDPFKRSVLDGRQLALKISCNSVYGFTGAQI-GKLPCLEISGSVTAFGRMMIE 689
Query: 1432 KA-----ISFVNEN-EKWKAKVIYGDTDRYTV 1457
+ + EN AKVIYGDTD V
Sbjct: 690 QTKQHVETQYTVENGYSHDAKVIYGDTDSVMV 721
>gi|156041052|ref|XP_001587512.1| hypothetical protein SS1G_11504 [Sclerotinia sclerotiorum 1980]
gi|154695888|gb|EDN95626.1| hypothetical protein SS1G_11504 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1106
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 140/450 (31%), Positives = 217/450 (48%), Gaps = 57/450 (12%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I + ++F KE + S + L DPDI++G++I +L +RA HL I + +
Sbjct: 361 IVNTQIFEFDKEEKMLSKWRDFLEEVDPDIIIGYNIANFDFPYLLDRADHLKIKNFSQWT 420
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R L+S I + T N ++ + G + GR+
Sbjct: 421 R--LKS--------IQSQAKTSNFSSK----------------QMGNRDTKATNTNGRLQ 454
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y +
Sbjct: 455 LDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTP-ESRRRLAVYCLKD 513
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + P
Sbjct: 514 AYLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQKL--VIPNL 571
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+S+ E V+EP G+Y+ P+ LDF SLYPS++ A+NLC+ T L K +
Sbjct: 572 STASSEEQYEG-ATVIEPTRGYYSVPIATLDFASLYPSIIQAHNLCYTTLLKKDV----- 625
Query: 1316 TLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
+ L KDE ++ PNG M+V K RKG+L ++LEE+L+ R KQA +
Sbjct: 626 ----------VEALNLEKDEDYIVTPNGDMFVTTKQRKGLLTQILEELLTAR---KQAKR 672
Query: 1375 KLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK- 1432
+LA + + N RQLALK+ AN YG T A G++PC +A S GR +EK
Sbjct: 673 ELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKVPCLPIASSTTSYGRQMIEKT 731
Query: 1433 -----AISFVNENEKWKAKVIYGDTDRYTV 1457
A + A+VIYGDTD V
Sbjct: 732 KAEVEAKYTIANGYSHDAQVIYGDTDSVMV 761
>gi|345564490|gb|EGX47452.1| hypothetical protein AOL_s00083g388 [Arthrobotrys oligospora ATCC
24927]
Length = 1099
Score = 176 bits (446), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 229/514 (44%), Gaps = 69/514 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYD---SINVVALAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R + PDP+ D I V + + ++ L C
Sbjct: 297 LRVLSFDIECAGRKGIFPDPKIDPVIQIASVVTRYGDKQPFIRNVFCLNTCAL------- 349
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I C++ S+E + + K L DPD+++G++I +L ERA L
Sbjct: 350 --IAGCQLCEFSREDQMLRAWTKFLQEVDPDVIIGYNIANFDFPYLLERAETL------K 401
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ P +++ SE + + G + + GR
Sbjct: 402 VKDFPFWTRLNGTKSEARASTFSSKQM--------------------GNRESKTTNTNGR 441
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I L+V +L++ + +L YT+ +V+ L + + ++T+ F P +R R Y +
Sbjct: 442 IQLDVLQLVQRDYQLRSYTLNSVSAHFLNEQKEDVHHTMITELFNGTP-ESRRRLAVYCL 500
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q+ L +
Sbjct: 501 KDAYLPQRLMDKLMCLINYAEMARVTGVPFNFLLARGQQVKFLSQLFRKAGEQS-LVVPN 559
Query: 1254 GNHQVASQPAMECL--PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+V E V+EP GFY +PV LDF SLYPS+M+A+NLC+ T L
Sbjct: 560 REQKVGGGGDEEQYEGATVIEPTRGFYKEPVATLDFASLYPSIMMAHNLCYTT-----LT 614
Query: 1312 SKE--NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
+E + +G+ D HV P G ++V VRKG+L + E++L R
Sbjct: 615 KQEHMDKMGMKE-GEDYHV----------TPTGDVFVNTSVRKGLLVTIFEDLLGARKRA 663
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + + N RQLALK+ AN YG T A +G++PC +A S GR
Sbjct: 664 KNDLKN--ETDPFKKAVLNGRQLALKISANSVYGLTGAT-NGKLPCLAIASSCTSYGREM 720
Query: 1430 LEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+E + V + A+VIYGDTD V
Sbjct: 721 IEATKAEVEKRYTIANGYSHDAQVIYGDTDSVMV 754
>gi|312081845|ref|XP_003143198.1| DNA-directed DNA polymerase III [Loa loa]
gi|307761639|gb|EFO20873.1| DNA-directed DNA polymerase III [Loa loa]
Length = 1084
Score = 176 bits (446), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 241/515 (46%), Gaps = 73/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ +R + P+ D++ N+V + EN+ + C
Sbjct: 286 LRILSFDIECTNRQGIFPEAHTDAVIQIANMVKIEGENEP-------FIRNCFVIGETAP 338
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
++G ++ V E L + + + + DPD++ G++IQ ++ ERA L I
Sbjct: 339 VIG---SQIIVSKSEEELLNKWAEFVRIVDPDLITGYNIQNFDFPYIVERARALKIE--- 392
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
SR + +I + S++ E ++ + RT+ ++ G
Sbjct: 393 --SRATMLGRIPSSLSKVREMPLSSKQMG-------------------NRTNKVT-NIEG 430
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+V +V++++ + KL Y++ +V+ L + + + ++ +G R R Y
Sbjct: 431 RVVFDVFQVVLRDYKLRSYSLNSVSYHFLCEQKEDVDYAMIAD-LQNGNALTRRRLAIYC 489
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L+++ +L + E+ARV G+ +LSRG Q +V S +LR A + ++
Sbjct: 490 MKDAYLPLKLLQKLMSVINYIEMARVTGVPLDYLLSRGQQVKVMSQILRKAKSMHFFL-- 547
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P V E V++P GFY P+ LDF SLYPS+MIA+NLC+ T + + P
Sbjct: 548 PVIDVVQPDDTYEG-ATVIDPIRGFYNTPIATLDFASLYPSIMIAHNLCYTTLIRR--PI 604
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
L S F + P+ +V P +R G+LP++LE++L+ R KQA
Sbjct: 605 ASYNLSDSDFE--------------VTPSNNRFVKPNIRHGLLPQVLEDLLNAR---KQA 647
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
L Q R + N RQLALK+ AN YG+T A G++PC E++ S+ GR ++
Sbjct: 648 KNDLKNEQDPFRRMVLNGRQLALKISANSVYGFTGASV-GKLPCLEISQSVTAYGRQMID 706
Query: 1432 KAISFVNENEK---------WKAKVIYGDTDRYTV 1457
+ V E K A+VIYGDTD V
Sbjct: 707 LTKNAVEEIYKEGYLDGKCPCDAQVIYGDTDSVMV 741
>gi|255549385|ref|XP_002515746.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
gi|223545183|gb|EEF46693.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
Length = 1049
Score = 176 bits (446), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 219/453 (48%), Gaps = 60/453 (13%)
Query: 1013 LVGIPDCKVFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
+VG+ D F +++ L + FI+ DPDI++G++I L +L ERA LGI
Sbjct: 286 IVGV-DVMSFDTERKVLLAWRDFIR---EVDPDIIIGYNICKFDLPYLIERAETLGIAEF 341
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ R S++ D+ S R ++G + + +
Sbjct: 342 PVLGRVR-NSRVRVKDTTFSSR-------------------------QYGTRESKEVTLE 375
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ ++ + M+ + KL+ Y++ +V+ L + + +++ +G R R Y
Sbjct: 376 GRVQFDLLQAMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIISD-LQNGNAETRRRLAVY 434
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L ++++L I E+ARV G+ +LSRG +V S LLR A +N +
Sbjct: 435 CLKDAYLPQRLLDKLMYIYNYVEMARVTGVPMSFLLSRGQSIKVLSQLLRKAKQKN--LV 492
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P Q S+ V+E +GFY P+ LDF SLYPS+M+AYNLC+CT + P
Sbjct: 493 IPNVKQAGSEQGSYEGATVLEANAGFYEKPIATLDFASLYPSIMMAYNLCYCTL---VTP 549
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
L + P V + P+G +V P ++KG+LP +LEE+L+ R ++
Sbjct: 550 EDVRKLNL----PPECVNK--------TPSGETFVKPNLQKGILPEILEELLAAR---RR 594
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A L ++ L + + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 595 AKADLKEAKDPLEKAVLDGRQLALKVSANSVYGFTGATV-GQLPCLEISSSVTSYGRQMI 653
Query: 1431 EKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
E V + + A+VIYGDTD V
Sbjct: 654 EHTKKLVEDKFTIMGGYEHNAEVIYGDTDSVMV 686
>gi|169775879|ref|XP_001822406.1| DNA polymerase delta catalytic subunit [Aspergillus oryzae RIB40]
gi|238502533|ref|XP_002382500.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
flavus NRRL3357]
gi|83771141|dbj|BAE61273.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220691310|gb|EED47658.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
flavus NRRL3357]
gi|391871049|gb|EIT80215.1| DNA polymerase delta, catalytic subunit [Aspergillus oryzae 3.042]
Length = 1104
Score = 176 bits (446), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 233/514 (45%), Gaps = 74/514 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A V Y +S+ R++ +
Sbjct: 307 LRILSFDIECAGRKGIFPEPNQDPVIQIANV------------VTRYGESKPFIRNVFVL 354
Query: 1017 PDCKVFVCS------KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V + KE + + + DPD+++G++I +L +RA HL
Sbjct: 355 DTCSLIVNTQILEFEKEEKMLMAWRDFVQKVDPDVIIGYNIANFDFPYLLDRAKHL---- 410
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ P +++ S+ E + + G +
Sbjct: 411 --KCTGFPYWTRLNGVMSQAKETNFSSKQM--------------------GNRDTKATNT 448
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GRI L++ +L++ + L YT+ +V+ L + + ++T+ P +R R
Sbjct: 449 NGRIQLDLLQLVQRDYHLRSYTLNSVSYEFLGEQKEDVHHTMITELHNGTPD-SRRRLAV 507
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q
Sbjct: 508 YCLKDAYLPQRLMDKLMCLINYTEMARVTGVPFNFLLSRGQQVKFMSQLFRKALEQQL-- 565
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
+ P N + Q V+EP G+Y P+ LDF SLYPS++ A+NLC+ T L K
Sbjct: 566 VIPNNTPESEQEYEGAT--VIEPVRGYYNVPIATLDFASLYPSIIQAHNLCYTTLLNKKA 623
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
+ N + D ++ ++ PNG ++ KVRKG+L ++LEE+L+ R K
Sbjct: 624 VERYN------LKKD--------EDYIVTPNGDLFCTTKVRKGLLSQILEELLAAR---K 666
Query: 1371 QAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 667 RAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLPIASSTTSYGRQM 725
Query: 1430 LEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + AKVIYGDTD V
Sbjct: 726 IEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMV 759
>gi|324120684|dbj|BAJ78733.1| DNA polymerase delta catalytic subunit [Lepidocampa weberi]
Length = 1096
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 232/513 (45%), Gaps = 74/513 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ R + P+ D + +A + + + E R++ +
Sbjct: 305 FRILSFDIECAGRKGIFPEAEKDPVIQIASMLQ------------IQGQEEPMIRTVFTL 352
Query: 1017 PDCKVFVCS------KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C V S E L + + + DPD++ G++I L +L RA LG
Sbjct: 353 NSCAPIVGSVVRSFNDEKELLEKWAEFVRQVDPDLITGYNINNFDLPYLLNRAKCLGSKH 412
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ + R ++S+ D + + + GR +++
Sbjct: 413 FSFLGRV-IQSRSVVHDVTLQSK-------------------------QMGRRENKSINI 446
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ ++ ++ + KL YT+ +V+ L+ + + +++ G + R R
Sbjct: 447 EGRVPFDLLLVLLRDYKLRSYTLNSVSFHFLQEQKEDVHHSIISD-LHHGNAQTRRRLAI 505
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L L ++++L I E+ARV G+ S+L+RG Q +V S +LR A TQN
Sbjct: 506 YCLKDAYLPLRLLDKLMCIINYMEMARVTGVPLSSLLTRGQQVKVMSQILRKAKTQNL-- 563
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T +
Sbjct: 564 IVPTYQSKGSDEQFEG-ATVIEPVKGYYNVPIATLDFSSLYPSIMMAHNLCYTTL---VR 619
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
P + L + + + P+G ++V +RKG+LP +LE +LS R K
Sbjct: 620 PGLDKNLNPTDY--------------IRTPSGNLFVKSALRKGLLPDILENLLSARKKAK 665
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+KK + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR+ +
Sbjct: 666 DDLKK--ETDPFKRKVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISQSVTAFGRTMI 722
Query: 1431 EKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
E V E + A+VIYGDTD V
Sbjct: 723 EFTKKEVEERYNRSQGAEHDAQVIYGDTDSVMV 755
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 82/205 (40%), Gaps = 59/205 (28%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLH 62
D + D+ +F + ID Y P+ G + G KV VP++R+YG T G C H
Sbjct: 78 DPKEDNLLFQE--MDIDVYTGFPMRG-------MPGLKVGSVPIVRLYGVTKQGNSICCH 128
Query: 63 IHRALPYLYVPCAD------IP-----------VQLRQEDD---------------GYMH 90
+H PY YV D IP LR+ D M+
Sbjct: 129 VHGFTPYFYVLLPDNFDNTHIPDFKDCLNRAMLNDLRRGKDDIPEPIISMEICDKQSIMY 188
Query: 91 AISLALEKALKVKGS-----AGSKRQHVHECSLVRAKKGGAVFDKSLQ----PHESHIPF 141
++ K L++K + AG+KR +KG V + Q P E++I F
Sbjct: 189 YQGSSVAKFLRIKVALPRLIAGTKRL---------LEKGDGVPQQFRQHIFRPFEANIDF 239
Query: 142 LLQFLVDYNLYGMGHLHLSKLKFRH 166
+F+VD +L G + + K +R
Sbjct: 240 ETRFMVDKDLVGCAWVEIPKKAWRR 264
>gi|440635761|gb|ELR05680.1| DNA polymerase delta subunit 1 [Geomyces destructans 20631-21]
Length = 1102
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 159/545 (29%), Positives = 251/545 (46%), Gaps = 71/545 (13%)
Query: 928 ISGPDGRSKPTPLSQIGFQD-PASAGAGEQ-----LTLLSIEVQAESRGDLRPDPRYDSI 981
IS + +S ++IG++D A GE L +LS +++ R + P+ +D +
Sbjct: 269 ISANERQSNCQIEAEIGYRDLIAHKPEGEWSKMAPLRILSFDIECAGRKGVFPEANHDPV 328
Query: 982 NVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSF 1041
+A + + + + S I + ++F +E + + L
Sbjct: 329 IQIANVVTRYGEKKPFVRNVFCLDTTSL------IVNTQIFEFQREEKMLMAWRDFLEMV 382
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLES-KIAAGDSEISERGITDNML 1100
DPDI++G++I +L +RA HL IG + SR L S K A +S S +
Sbjct: 383 DPDIIIGYNISNFDFPYLLDRAKHLKIGGFDYWSR--LHSIKSVAKESNFSSK------- 433
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+ G + GR+ L++ +L++ + +L YT+ +V+
Sbjct: 434 ------------------QMGNRDTKATNTNGRLQLDLLQLVQRDHQLRSYTLNSVSAQF 475
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L + + ++T+ F P +R R Y + A L ++ +L + +E+ARV G
Sbjct: 476 LGEQKEDVHHTMITELFNGTP-ESRRRLAVYCLKDAYLPQRLLEKLSCLENYTEMARVTG 534
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
+ F +LSRG Q + S L R A Q + P AS E V+EP G+Y
Sbjct: 535 VPFNFLLSRGQQVKFVSQLFRKALEQKL--VIPNQRTEASGEQYEG-ATVIEPTRGYYDV 591
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDE-LLIP 1339
P+ LDF SLYPS++ A+NLC+ T L K K LG+ KDE ++
Sbjct: 592 PIATLDFASLYPSIIQAHNLCYTTLLNKASVDK---LGLK------------KDEDYIVT 636
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIA 1398
PNG M+ K RKG+L ++L+E+L+ R KQA ++LA + + N RQLALK+ A
Sbjct: 637 PNGDMFCTAKQRKGLLTQILDELLTAR---KQAKRELAVETDPFKKAVLNGRQLALKISA 693
Query: 1399 NVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK------AISFVNENEKWKAKVIYGDT 1452
N YG T A G++PC E+A S GR +EK A + A+VIYGDT
Sbjct: 694 NSVYGLTGATV-GKLPCLEIAGSTTSYGRQMIEKTKAEVEAKYTIANGYAHDAQVIYGDT 752
Query: 1453 DRYTV 1457
D V
Sbjct: 753 DSVMV 757
>gi|403343190|gb|EJY70918.1| DNA polymerase [Oxytricha trifallax]
Length = 1071
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 236/515 (45%), Gaps = 78/515 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ + P P+ D I +A V ++ + E R++ +
Sbjct: 265 LRILSFDIECSADKGRFPQPQLDPIIQIANI------------VKIHGEKEPFVRNVFTL 312
Query: 1017 PDCKVFVCS------KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
+C V S +E + + L DPDI+ G++I ++ RA L +
Sbjct: 313 KECAPIVGSQVSSYQREEEMLRAWKDFLVEVDPDIITGYNIVNFDFPYIINRAIALHMNK 372
Query: 1071 LNDISRT-PLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
R +ES+I A + S + + G ++
Sbjct: 373 FAHFGRILGVESRIKA--NTFSSKAL-------------------------GTRETKDIN 405
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GR+ ++ +++ E KL YT+ +V+ L + +P +++ +G R R
Sbjct: 406 IDGRVQFDMLQVILREHKLRSYTLNSVSAQFLGEQKEDVPHTIISD-LQNGTEYTRRRLA 464
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L L +M +L + +E++RV G+ + +RG Q +V S L R A + Y
Sbjct: 465 VYCLKDAYLPLRLMEKLMCLFNLTEMSRVTGVPISFLFTRGQQIKVASQLYRKA--KEYD 522
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
I P + A + E +V+EP GFY DPV LDF SLYPS+M+A+NLC+
Sbjct: 523 LIIPVDKTAAMEGKYEG-AVVIEPTRGFYTDPVATLDFASLYPSIMMAHNLCY------- 574
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
SS P + + + + PNG ++ V+KG+LP +LEE+L+ R
Sbjct: 575 ----------SSLIPAHEIGKHPLENYIKTPNGDYFMKQSVKKGLLPMILEELLAARKRA 624
Query: 1370 KQAIKKLA-PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
+Q + K P Q+ + + RQLALK+ AN YG+T A G++PC ++ S+ GR
Sbjct: 625 RQELAKTTDPFQKA---VLDGRQLALKISANSVYGFTGAQV-GQLPCLAISSSVTSYGRE 680
Query: 1429 TLEKAISFV-----NEN-EKWKAKVIYGDTDRYTV 1457
+E ++V EN ++ ++VIYGDTD V
Sbjct: 681 MIEATRAYVLQKYNKENGYEFDSQVIYGDTDSVMV 715
>gi|154305265|ref|XP_001553035.1| hypothetical protein BC1G_08927 [Botryotinia fuckeliana B05.10]
Length = 846
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/450 (31%), Positives = 219/450 (48%), Gaps = 57/450 (12%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I + ++FV +E + S + L DPDI++G++I +L +RA HL I + +
Sbjct: 361 IVNTQIFVYKEEETMLSKWRDFLEEVDPDIIIGYNIANFDFPYLLDRADHLKIKNFSQWT 420
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R L+S I + T N ++ + G + GR+
Sbjct: 421 R--LKS--------IHSQAKTSNFSSK----------------QMGNRDTKATNTNGRLQ 454
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y +
Sbjct: 455 LDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTP-ESRRRLAVYCLKD 513
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + P
Sbjct: 514 AFLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQK--LVIPNL 571
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+S+ E V+EP G+Y+ P+ LDF SLYPS++ A+NLC+ T L K +
Sbjct: 572 SSNSSEEQYEG-ATVIEPTRGYYSVPIATLDFASLYPSIIQAHNLCYTTLLKKDV----- 625
Query: 1316 TLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
+ L+ KDE ++ PNG M+V K RKG+L ++LEE+L+ R KQA +
Sbjct: 626 ----------VEALKLEKDEDYIVTPNGDMFVTTKQRKGLLTQILEELLTAR---KQAKR 672
Query: 1375 KLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK- 1432
+LA + + N RQLALK+ AN YG T A G++PC +A S GR +EK
Sbjct: 673 ELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKVPCLPIASSTTSYGRQMIEKT 731
Query: 1433 -----AISFVNENEKWKAKVIYGDTDRYTV 1457
A + A+VIYGDTD V
Sbjct: 732 KAEVEAKYTIANGYSHDAQVIYGDTDSVMV 761
>gi|449547887|gb|EMD38854.1| hypothetical protein CERSUDRAFT_112578 [Ceriporiopsis subvermispora
B]
Length = 1085
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 237/507 (46%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + + +H +VG
Sbjct: 289 LRILSFDIECAGRKGIFPEANIDPVIQIANMVTRQGESKPFIRNIFTLNTCAH---IVG- 344
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V S E + + + DPD++ G+++ + +L +RA L + R
Sbjct: 345 --SQVLSYSDESEMLLAWRAFVEQVDPDVITGYNMANFDIPYLLDRAKALKTDRFPMLGR 402
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+ K A ++ S + +G+ + + GR+ +
Sbjct: 403 M-INMKAATKETHFSSKA-------------------------FGQRDSKDTALDGRLQI 436
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ + M+ E KL YT+ +V L + + V+T+ +G +R R Y + A
Sbjct: 437 DMLQYMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITE-LQNGTPESRRRLAVYCLKDA 495
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +LSRG +V S L R A+ + YL P
Sbjct: 496 YLPQRLMDKLMCFINYTEMARVTGVPFNYLLSRGQSIKVLSQLFRRANEEGYLI--PSLK 553
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T L K NT
Sbjct: 554 GEGSDEQYEG-ATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLDK------NT 606
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ +++++D+ + + PN +V RKG+LP +LE+++STR K +KK
Sbjct: 607 ID------RMNLVKDI--DYIQTPNNDFFVKSTKRKGLLPTILEDLISTRKRAKADLKK- 657
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA--- 1433
+ + + RQLALK+ AN YG+T A G++PC ++ S+ GR +E+
Sbjct: 658 -ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTSYGRQMIEQTKRE 715
Query: 1434 --ISFVNEN-EKWKAKVIYGDTDRYTV 1457
F ++N K AKVIYGDTD V
Sbjct: 716 VEAEFSSDNGHKHNAKVIYGDTDSVMV 742
>gi|340502511|gb|EGR29193.1| hypothetical protein IMG5_161090 [Ichthyophthirius multifiliis]
Length = 1092
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 230/516 (44%), Gaps = 78/516 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYD---SINVVALAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L + S +++ +++ P+ + D I+ V + D ++ + C +
Sbjct: 278 LRIFSFDIECQAKDGGFPNAQKDPIIQISTVLKIHDQQDDLVKTVFTIGSCSN------- 330
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI----- 1068
IP C V KE L + + DPDI +G++I ++ +RA L +
Sbjct: 331 --IPGCIVKSYEKEEDLLKEWEIFMQFVDPDIYLGYNIINFDFPYIFDRAKKLNVNKGKF 388
Query: 1069 GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGL 1128
G + I T SKI G + G+ + +
Sbjct: 389 GYMGRIKTTI--SKIKDGKFQSKAMGLRE---------------------------TKEI 419
Query: 1129 HVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRC 1188
+ GRI L+++ M+ E KL+ Y++ V+ L + + ++ G R R
Sbjct: 420 NFEGRIQLDMFIHMQKEQKLSSYSLNTVSYHFLNEQKEDVHHTQIS-VLQEGNSETRKRL 478
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
Y + ++L L++M +L I +E+ARV G+ + RG Q +V S L R A
Sbjct: 479 AIYCLKDSQLPLKLMQKLMCIYNYTEMARVTGVPINYLFVRGQQIKVASQLYRKAKLCKM 538
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
P E V+EP+ GFY+ P+ LDF SLYPS+M+A+NLC+ T + +
Sbjct: 539 FI--PTERSKGQGDKFEG-AFVLEPKRGFYSKPIATLDFASLYPSIMMAHNLCYSTLITR 595
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
+ K N KD+ PNG +V P +RKG+LP +L+E+L+ R
Sbjct: 596 DITLKMN-----------------KDDYTATPNGDYFVKPHIRKGILPEILKELLNAR-- 636
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A L L + + + RQLALK+ AN YG+T A G++PC +++ S+ GR
Sbjct: 637 -KKAKNDLTQETDPLKKAVLDGRQLALKISANSVYGFTGAQL-GQLPCLQISSSVTSFGR 694
Query: 1428 STLEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+ +E FV E+ ++ + VIYGDTD V
Sbjct: 695 NMIEGTRDFVLEHFSKKNGYEYDSDVIYGDTDSVMV 730
>gi|326480238|gb|EGE04248.1| DNA polymerase delta catalytic subunit [Trichophyton equinum CBS
127.97]
Length = 1111
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 240/512 (46%), Gaps = 68/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R + P+P D + +A + ++V+ C S
Sbjct: 312 LRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKPFVRNVFVMDTCSS------- 364
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I + +V KE ++ + + DPD+++G++I +L +RA +L +
Sbjct: 365 --IVNTQVLEFDKEENMLMAWRDFVEKVDPDVIIGYNIANFDFPYLLDRARYL------N 416
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ P S++ +G+ +S K + + G+ + + GR
Sbjct: 417 CLKFPYWSRL---------KGV-----------QSHATKTSFASKQMGKRDSKATNTNGR 456
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I L++ +L++ + L YT+ +V L + + ++T+ + P +R R Y +
Sbjct: 457 IQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITELYNGTPD-SRRRLAVYCL 515
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q +
Sbjct: 516 KDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLARGQQIKFISQLFRKALEQKLVIPDL 575
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
N ++Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L K K
Sbjct: 576 KNDDNSNQQYEGA--TVIEPVRDYYPVPIATLDFASLYPSIIQAHNLCYTTLLNKRTVEK 633
Query: 1314 ENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
LG+ KDE ++ PN M+ KVRKG+L ++LEE+L+ R K+A
Sbjct: 634 ---LGLK------------KDEDYIVTPNDDMFCTAKVRKGLLSQILEELLTAR---KRA 675
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
++LA + + + N RQLALK+ AN YG T A +G++PC +A S GR +E
Sbjct: 676 KRELAVEKDPFKKAVLNGRQLALKISANSVYGITGAT-NGKLPCLAIASSTTSYGRQMIE 734
Query: 1432 K------AISFVNENEKWKAKVIYGDTDRYTV 1457
K A ++ AKVIYGDTD V
Sbjct: 735 KTKDEVEARYTISNGYSHDAKVIYGDTDSVMV 766
>gi|164655413|ref|XP_001728836.1| hypothetical protein MGL_4003 [Malassezia globosa CBS 7966]
gi|159102722|gb|EDP41622.1| hypothetical protein MGL_4003 [Malassezia globosa CBS 7966]
Length = 970
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 233/511 (45%), Gaps = 67/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L LS +++ R + PDP D + +A + + + + SH +VG
Sbjct: 177 LRTLSFDIECAGRKGVFPDPNVDPVIQIANMVTRHGESTPFVKNIFTLGTCSH---IVG- 232
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
C V E+ L + + DPD+++G++I +L +RA L + + R
Sbjct: 233 --CHVMSFENEVQLLEAWSDFVQRVDPDVVIGYNISNFDFPYLLDRAKALKVTTFPFLGR 290
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
++ A D+ S + +G + + GRI L
Sbjct: 291 EK-NARSEAKDTHFSSKA-------------------------YGTRDSKHTELQGRIQL 324
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ + KL Y++ +V+ L+ + + ++T+ SGP AR R Y + A
Sbjct: 325 DMLQVMQRDYKLRSYSLNSVSFEFLKEQKEDVHHSLITELQNSGP-EARRRLAVYCLKDA 383
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E+ARV G+ F +LSRG Q +V S L R A YL P
Sbjct: 384 YLPQRLMDKLMCLINYTEMARVTGVPFNYLLSRGQQIKVISQLFRKAREDGYLI--PAYK 441
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
E V++P+ G+Y PV LDF SLYPS+M+A+NLC+ T + K
Sbjct: 442 GEGGDEQYEG-ATVLDPKQGYYDKPVATLDFASLYPSIMMAHNLCYTTLVDK-------- 492
Query: 1317 LGVSSFRPDLHVLRDLK----DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
H + LK + ++ PN +V VRKG+LP +LE +L+ R K
Sbjct: 493 ----------HTIDRLKLVEDKDYVVTPNNNYFVCKTVRKGLLPDVLEALLAARKAAKSD 542
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K + + + + RQLALK+ AN YG+T A GR+PC E++ S+ GR +E+
Sbjct: 543 LKN--ETDPLRRAVLDGRQLALKVSANSVYGFTGATV-GRLPCLEISMSVTAYGRQMIEE 599
Query: 1433 AISFVNENEKWK------AKVIYGDTDRYTV 1457
V ++ K A VIYGDTD V
Sbjct: 600 TKRQVEKHYTVKNGYEHDAVVIYGDTDSVMV 630
>gi|324120722|dbj|BAJ78752.1| DNA polymerase delta catalytic subunit [Forficula hiromasai]
Length = 1120
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 236/511 (46%), Gaps = 70/511 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHA---VEIYVLLYCKSESHQRSL 1013
+LS +++ R + P+P +D + +A + ++ L C + H
Sbjct: 331 FRILSFDIECAGRKGIFPEPEHDPVIQIASMVQEQGQREPFIRNVFTLNTCATILHS--- 387
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
+VF KE L + + + DPDI+ G++I L ++ RA HL +
Sbjct: 388 ------QVFSFQKESELLNEWASFVRLVDPDIITGYNINNFDLPYILNRAKHLKVDKFAY 441
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+SR N+ + VV +L + G+ +++ GR
Sbjct: 442 LSRI-------------------KNICS--VVKSKMLQ-----SKQMGQRENKYVNLEGR 475
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ +++ ++ E KL YT+ AV+ L+ + + ++++ +G + R R Y +
Sbjct: 476 VPFDMYLVLIREYKLRQYTLNAVSYHFLQEQKEDVHHSIISE-LQNGNAQTRRRLAIYCL 534
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L E++RV G+ S+L+RG Q +V S LLR + + YL P
Sbjct: 535 KDALLPLRLLDKLMSFINYMEMSRVTGVSLSSLLTRGQQVKVVSQLLRHSRARGYLM--P 592
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
+ A E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T + P+K
Sbjct: 593 AHTXSAGDEQFEG-ATVIEPRRGYYPHPIATLDFSSLYPSIMMAHNLCYTTL---VPPNK 648
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
N + D+L P ++V VRKG+LP +LE++L+ R K +
Sbjct: 649 RNIVPA--------------DQLTHTPANNLFVKASVRKGLLPEILEDLLAARKQAKADL 694
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
K + ++ + RQLALK+ AN YG+T A GR+PC E++ S+ GR +E
Sbjct: 695 KN--ETDPFKKQVLDGRQLALKISANSVYGFTGAQV-GRLPCLEISSSVTAYGRQMIEST 751
Query: 1434 ISFVNENE-------KWKAKVIYGDTDRYTV 1457
V EN+ + VIYGDTD V
Sbjct: 752 KQEV-ENKYNVSNGYDHDSMVIYGDTDSVMV 781
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 16 VSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
+ IDHY+ +P + G + VPV+R+YG T G C H H PY YV
Sbjct: 124 IDIDHYIGTHLP-------DMPGAQTGPVPVMRLYGVTQEGNSICCHAHGFAPYFYV 173
>gi|326473539|gb|EGD97548.1| DNA polymerase family B [Trichophyton tonsurans CBS 112818]
Length = 1085
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 240/512 (46%), Gaps = 68/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R + P+P D + +A + ++V+ C S
Sbjct: 312 LRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKPFVRNVFVMDTCSS------- 364
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I + +V KE ++ + + DPD+++G++I +L +RA +L +
Sbjct: 365 --IVNTQVLEFDKEENMLMAWRDFVEKVDPDVIIGYNIANFDFPYLLDRARYL------N 416
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ P S++ +G+ +S K + + G+ + + GR
Sbjct: 417 CLKFPYWSRL---------KGV-----------QSHATKTSFASKQMGKRDSKATNTNGR 456
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I L++ +L++ + L YT+ +V L + + ++T+ + P +R R Y +
Sbjct: 457 IQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITELYNGTPD-SRRRLAVYCL 515
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q +
Sbjct: 516 KDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLARGQQIKFISQLFRKALEQKLVIPDL 575
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
N ++Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L K K
Sbjct: 576 KNDDNSNQQYEGA--TVIEPVRDYYPVPIATLDFASLYPSIIQAHNLCYTTLLNKRTVEK 633
Query: 1314 ENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
LG+ KDE ++ PN M+ KVRKG+L ++LEE+L+ R K+A
Sbjct: 634 ---LGLE------------KDEDYIVTPNDDMFCTAKVRKGLLSQILEELLTAR---KRA 675
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
++LA + + + N RQLALK+ AN YG T A +G++PC +A S GR +E
Sbjct: 676 KRELAVEKDPFKKAVLNGRQLALKISANSVYGITGAT-NGKLPCLAIASSTTSYGRQMIE 734
Query: 1432 K------AISFVNENEKWKAKVIYGDTDRYTV 1457
K A ++ AKVIYGDTD V
Sbjct: 735 KTKDEVEARYTISNGYSHDAKVIYGDTDSVMV 766
>gi|346327129|gb|EGX96725.1| DNA polymerase delta catalytic subunit [Cordyceps militaris CM01]
Length = 1108
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 237/509 (46%), Gaps = 62/509 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P +D + +A + + + + S I
Sbjct: 306 LRILSFDIECAGRKGIFPEPEHDPVIQIANVVTRYGEKKPFVRNVFCLDTTS------SI 359
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V KE + S + + L DPDI++G++I +L RA HL + +R
Sbjct: 360 VATQVLEYEKEAKMLSEWQQFLIKVDPDIIIGYNIANFDFPYLINRAKHLKVNGFEYWTR 419
Query: 1077 TP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
P + S++ D+ S + I G + GR+
Sbjct: 420 LPSIPSRVK--DTSFSSKQI-------------------------GNRDTKATNTNGRLQ 452
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ +L++ + +L YT+ +V L + + ++T+ F P R R Y +
Sbjct: 453 LDLLQLIQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTP-ENRRRLAIYCLKD 511
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + P
Sbjct: 512 AYLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFVSQLFRKALEQKL--VIPNM 569
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
S E V+EP G+Y P+ LDF SLYPS+M A+NLC+ T L ++++
Sbjct: 570 KGDPSDDQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTT-----LITRKD 623
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ ++++D ++ ++ PNG +V K RKG+L ++LEE+LS R KQA ++
Sbjct: 624 RIA------QFNLVKD--EDYIVTPNGDTFVTTKQRKGLLAQILEELLSAR---KQAKRE 672
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + N RQLALK+ AN YG T A +G++PC +A S GR +E+
Sbjct: 673 LAVETDPFKKAVLNGRQLALKISANSVYGLTGAT-TGKLPCLAIASSTTSFGRQMIERTK 731
Query: 1435 SFVNEN------EKWKAKVIYGDTDRYTV 1457
V + A+VIYGDTD V
Sbjct: 732 DEVEKKYCIANGYSHDAQVIYGDTDSVMV 760
>gi|66809121|ref|XP_638283.1| DNA polymerase delta catalytic subunit [Dictyostelium discoideum AX4]
gi|74853854|sp|Q54N97.1|DPOD1_DICDI RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|60466714|gb|EAL64765.1| DNA polymerase delta catalytic subunit [Dictyostelium discoideum AX4]
Length = 1104
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 238/513 (46%), Gaps = 78/513 (15%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R + P+P D + ++ +N+ D I + K S S+VG
Sbjct: 317 ILSFDIECAGRKGVFPEPEKDPVIQISNIVKNNGDAEPFIKNIFTLKGCS---SIVG--- 370
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI---GLLNDIS 1075
V +E L + K + DPD+++G++I + +L RA L I LL I
Sbjct: 371 AHVIPHKREEDLLREWRKFVIKVDPDVIIGYNIVNFDIPYLISRARQLKIPEFALLGRIK 430
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
T SKI S R + N+ G + + + GR
Sbjct: 431 TTI--SKIK------STRFSSSNL---------------------GTRESKEISMPGRTQ 461
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ + ++ + KL Y++ V+ L+ + + F +++ +G R R Y +
Sbjct: 462 FDLMQAIQRDHKLTSYSLNNVSAHFLKEQKEDVHFSIISD-LQNGTDDDRRRLAVYCIKD 520
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L + ++++L ++ +E+ARV G+ +L RG +V S L R A +N+L +
Sbjct: 521 AVLPMRLLDKLMILINYTEMARVTGVPLSYLLGRGEGIKVLSQLYRKAMVENFLIPT--- 577
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL----GKILP 1311
++V + +V+EP GFY P+ LDF SLYPS+M+A+NLC+ T L K LP
Sbjct: 578 YKVTGKGEKFQGAIVIEPTPGFYDTPIATLDFTSLYPSIMMAHNLCYSTLLSAEEAKKLP 637
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
P+++ P G ++ +KG+LPR+LEE+LS R K+
Sbjct: 638 ------------PEIYT---------TTPFGDHFIKSDTKKGLLPRILEELLSAR---KK 673
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +L + R + + RQLALK+ AN YG+T A G++PC E++ S+ GR L
Sbjct: 674 AKDELKNEKDPFKRAVLDGRQLALKISANSVYGFTGARV-GKLPCLEISRSVTSFGREML 732
Query: 1431 EKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+K V E K A +IYGDTD V
Sbjct: 733 DKTKKIVEERYTIANGYKHDAVIIYGDTDSVMV 765
>gi|169806198|ref|XP_001827844.1| DNA polymerase delta catalytic subunit [Enterocytozoon bieneusi H348]
gi|161779292|gb|EDQ31315.1| DNA polymerase delta catalytic subunit [Enterocytozoon bieneusi H348]
Length = 968
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 238/510 (46%), Gaps = 78/510 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ + P D VV + S EI +++C E + I
Sbjct: 191 LKILSFDIECCGDTNAFPSALLDP--VVQIGNIIQSTIGNEIKQVIFCLKE-----VADI 243
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
PD V KE L + K + +PDI++G++I+ +L ERA L + + R
Sbjct: 244 PDAVVHWFDKEEDLLMAWNKFIHDENPDIILGYNIKNFDFPYLLERANILKLKEFARLGR 303
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
T SK S+ G SL D IE GRI+
Sbjct: 304 TNKISKSIKKTQSSSQFG-------------SLEFNDITIE--------------GRIIF 336
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
+++ +++ + KL Y++ +V+ L+ + ++ + + +G R R Y + A
Sbjct: 337 DIFHILKRDFKLRSYSLNSVSMHFLKEQKEAVSYSSIHS-LQNGNKETRRRIATYCLKDA 395
Query: 1197 KLNLEIMNQLDMINRTSELARV--FGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA---- 1250
L L I +L++ + ELARV I+FF L+RG+ +V S++ + A+ NY+
Sbjct: 396 YLPLRIFKKLNIFTKYIELARVTYVPIEFF--LTRGTSIKVLSLIYKEANAYNYIIPDME 453
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I G+ + V+ P GFY DP+ VLDF SLYPS++I+ NLC+ T L +
Sbjct: 454 IKDGDTKYDG-------AFVINPLKGFYKDPIAVLDFCSLYPSIIISNNLCYTTLLNDKM 506
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
++ L +++ P G +V ++KG+LP +LE++LS R + K
Sbjct: 507 AARFKEL-----------------DIIKTPTGDCFVSSHIKKGLLPIILEKLLSNRKLTK 549
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+ +K+ + L +I + RQLALKL AN YG+T A G++PC ++ S GR +
Sbjct: 550 KLLKETEDPE--LQKILDGRQLALKLCANSIYGFTGAQV-GQLPCISISQSTTAFGRDMI 606
Query: 1431 EKAISFVNENEKWKAK-------VIYGDTD 1453
K + + E++ KA VIYGDTD
Sbjct: 607 SKTKNLI-ESKYSKASGFTHDVIVIYGDTD 635
Score = 47.0 bits (110), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 44/233 (18%)
Query: 31 ICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYM- 89
I Y + Q N +P I ++G T G + ++ LPY Y+ + PV + +D
Sbjct: 11 IDYITSQASMENNLPTIVIFGKTINGIPIQVKVNDFLPYFYIETSH-PVNPNELEDAIKS 69
Query: 90 -------HAISLALEKAL--KVKGSAGSKRQHVHECSLVRAKKGGAVFDKSL-------- 132
H + L+K + V+ ++ + + ++ R K A+FDK L
Sbjct: 70 TTIKNNCHGVDKVLKKNIYGYVEDTSIYYKVFFNTPTIFRQAK--AIFDKGLVISGQVVK 127
Query: 133 -QPHESHIPFLLQFLVDYNLYGMGHLHLSK-----------LKFRHPVPDAF-FPRKFNY 179
+ ES+ PF+L+F+ D NL G ++ + +K H + + F K+N
Sbjct: 128 FKTFESNFPFVLRFMHDINLAGCSYIKIKVWEPENTGNGLIIKTSHKLIEVLPFEGKYNS 187
Query: 180 SSKQASADFQVIGCG---SYPMHLM------GHQIKTLSGLNIK-VFLSLKEM 222
F + CG ++P L+ G+ I++ G IK V LKE+
Sbjct: 188 IIPLKILSFDIECCGDTNAFPSALLDPVVQIGNIIQSTIGNEIKQVIFCLKEV 240
>gi|295661753|ref|XP_002791431.1| DNA polymerase delta catalytic subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279988|gb|EEH35554.1| DNA polymerase delta catalytic subunit [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1110
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 145/515 (28%), Positives = 242/515 (46%), Gaps = 75/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y +S+ R++ +
Sbjct: 312 LRILSFDIECAGRKGVFPEANQDPVIQIANV------------VTRYGESKPFVRNVFVL 359
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V ++ E + + + L DPD+++G++I +L +RA HL
Sbjct: 360 DTCSLIVNTQILEFDTEERMLMAWKEFLVEVDPDVIIGYNIANFDFPYLIKRAEHLKCRE 419
Query: 1071 LNDISR-TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
SR T + S++ GD+ S + I G + +
Sbjct: 420 FPFWSRLTQVASRV--GDARFSSKQI-------------------------GNRESKSTN 452
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GRI L++ +L++ + +L YT+ +V L + + ++T+ F +G +R R
Sbjct: 453 ISGRIQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITELF-NGTADSRRRLA 511
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q +
Sbjct: 512 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQQLV 571
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ N + Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 572 IPNLRNEATSEQYEGAT---VIEPLRAYYDVPIATLDFASLYPSIIQAHNLCYTTLL--- 625
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K++T+ + H +++ +D ++ PNG + KVRKG+L ++LEE+L R
Sbjct: 626 ---KKSTI-------EAHGMKEGED-YIVTPNGDRFCTAKVRKGLLTQILEELLGAR--- 671
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 672 KRAKKELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATV-GKLPCLPIASSTTSYGRQ 730
Query: 1429 TLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + A+V+YGDTD V
Sbjct: 731 MIEKTKEEVEAKYTIANGYSNDAQVVYGDTDSVMV 765
>gi|298714506|emb|CBJ27528.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1097
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 213/435 (48%), Gaps = 57/435 (13%)
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEI 1090
+S F+K+ DPDIL G++IQ + +L RA L S+ + +
Sbjct: 382 WSQFVKVA---DPDILTGYNIQNFDVPYLLNRAKAL--------------SRKSKKLEKF 424
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVGGRIVLNVWRLMRGEVKLN 1149
E G +A KD + +G+ + GR++ ++ M KL+
Sbjct: 425 GEWGRLRGKMAT--------MKDTTFQSSAYGKRENVETSIDGRVMFDMLPYMFRNHKLS 476
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
Y++ +V+ +L ++ + + +++ +G R R Y + A L +++M +L ++
Sbjct: 477 SYSLNSVSAELLGQQKEDVHYSIISD-LQNGSDEDRRRLAVYCIKDALLPMKLMEKLSVM 535
Query: 1210 NRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPL 1269
E+ARV G+ +LSRG Q +V SMLLR + N L + H V Q E
Sbjct: 536 VNYIEMARVTGVPLNFLLSRGQQIKVFSMLLRKTRSVNLLIPNLPKHAV-DQETYEG-AT 593
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVL 1329
V+EP+ FY +P+ LDF SLYPS+M AYNLC+ T + +N L +P
Sbjct: 594 VIEPKKAFYEEPIATLDFASLYPSIMQAYNLCYSTLVAG---EDKNKL-----KP----- 640
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR-IFN 1388
D+ L P+G ++V +V KG+LP +L+E+L+ R KQA + +A + + + + N
Sbjct: 641 ----DQYLTSPSGDVFVKSEVTKGLLPAILDELLTAR---KQAKRDMAAATDPMEKAVQN 693
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEK------ 1442
RQLALK+ AN YG+T A G++PC +A S GR L + S+V E
Sbjct: 694 GRQLALKVSANSVYGFTGATV-GQLPCLPIASSTTSYGRDLLFRTRSYVEETYTVANGYD 752
Query: 1443 WKAKVIYGDTDRYTV 1457
A V+YGDTD V
Sbjct: 753 HDADVVYGDTDSVMV 767
Score = 46.6 bits (109), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 45/157 (28%)
Query: 44 VPVIRVYGSTPAGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKAL--K 101
VPVIR+YG T G H+H +PY Y+PC P +D + A+ A+ AL +
Sbjct: 120 VPVIRLYGVTEEGNSVFTHVHGFVPYFYIPC---PPNF---EDRHRGALQQAIITALRAR 173
Query: 102 VKGSAGSKRQHVHECSLVRAKKG--GAVFDK------------SLQP------------- 134
++G R + K+ G F SL P
Sbjct: 174 IRGDENRIRSLCLGVGFAKDKQSLLGYSFGNTRDFLQIYLAMPSLLPKVKTLLADGIHVD 233
Query: 135 ----------HESHIPFLLQFLVDYNLYGMGHLHLSK 161
+ES++PF+L+F+VD + G + L K
Sbjct: 234 GYGQLCASTSYESNVPFVLRFMVDKEIPGASWIELPK 270
>gi|328770280|gb|EGF80322.1| hypothetical protein BATDEDRAFT_16581 [Batrachochytrium dendrobatidis
JAM81]
Length = 1125
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 242/523 (46%), Gaps = 79/523 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
L +LS +++ R + P+ + D + +A +A + D+ V I+ L C S +
Sbjct: 322 LRILSFDIECAGRRGIFPEAQIDPVIQIANMVALQGDTKPFVRNIFTLNTCSS------I 375
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
+G S+ + +S FI+ DPDI++G++I G +L +RA LG+
Sbjct: 376 IGTHVMSFQSESEMLQGWSDFIQ---EVDPDIIIGYNINGFDFPYLLDRADTLGLDNFAF 432
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R SK A D+ S + +G +++ GR
Sbjct: 433 LGRVT-ASKAKAKDTRFSSKA-------------------------YGTRDTKSINLEGR 466
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ L++ ++M+ + KL Y++ +V+ L + + +++ +G R R Y +
Sbjct: 467 LQLDLLQIMQRDYKLRSYSLNSVSAHFLGEQKEDVHHSIISD-LQNGNDETRRRLAVYCL 525
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++N+L ++ E+ARV G+ F +L+RG Q +V S L R A ++ L P
Sbjct: 526 KDAYLPLRLLNKLMLVINYMEMARVTGVPFNYLLTRGQQIKVVSQLYRKAIMEDLLI--P 583
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
S E +V+EP GFY P+ LDF SLYPS+M+A+NLC+ T +
Sbjct: 584 ALEVEGSDEQYEG-AIVIEPLKGFYQVPIATLDFTSLYPSIMMAHNLCYSTYIAN----- 637
Query: 1314 ENTLGVSSFRPDLHVL--RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
S L+++ RD K PN ++ +RKG+LP +LE++LS R K
Sbjct: 638 ------SDLAAKLNLVEGRDYKRT----PNNDLFAVASLRKGLLPTILEDLLSARKRAKS 687
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K + + + RQLALK+ AN YG+T A G++P ++ S+ GR +E
Sbjct: 688 DLKN--ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPLLAISSSVTAYGRVMIE 744
Query: 1432 K-----------AISFVNEN------EKWKAKVIYGDTDRYTV 1457
+ AI V E K A+++YGDTD V
Sbjct: 745 QTKQASHFLIRYAILLVEEKFQVANGYKHDAQIVYGDTDSVMV 787
>gi|389745703|gb|EIM86884.1| hypothetical protein STEHIDRAFT_79581, partial [Stereum hirsutum
FP-91666 SS1]
Length = 1077
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 230/507 (45%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + + SH +VG
Sbjct: 281 LRVLSFDIECAGRKGIFPEANVDPVIQIANMVTRQGESKPFIRNIFTLNTCSH---IVG- 336
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E + + + DPD+++G++I L +L +RA L + +D
Sbjct: 337 --SQVLSFDDEREMLQAWCNFINEADPDVVIGYNISNFDLPYLLDRAKALKV---DDF-- 389
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P +I +++ + + +G+ + + GR+ L
Sbjct: 390 -PYFGRIKGNKTQVKDTHFSSKA--------------------FGQRDSKETTMDGRLQL 428
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ + M+ E KL YT+ +V L + + V+T+ +G +R R Y + A
Sbjct: 429 DLLQYMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITE-LQNGTSESRRRLAVYCLKDA 487
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +LSRG +V S L R A+ + Y + P
Sbjct: 488 YLPQRLMDKLMCFVNYTEMARVTGVPFNYLLSRGQSIKVLSQLFRKANDEGY--VVPSLK 545
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T L K NT
Sbjct: 546 GEGSDEQYEG-ATVIEPKKGYYDAPIATLDFSSLYPSIMMAHNLCYTTLLDK------NT 598
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ + + D+ ++ PN ++ RKG+LP +LE+++ R K +K
Sbjct: 599 IDRLNLQKDIDYIQ--------TPNNDFFIKSHKRKGLLPTVLEDLIGARKRAKADLKN- 649
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ + + RQLALK+ AN YG+T A G++PC ++ S+ GR +EK S
Sbjct: 650 -ETDPFKRAVLDGRQLALKVSANSVYGFTGATI-GKLPCLPISSSVTSYGRQMIEKTKSE 707
Query: 1437 VN------ENEKWKAKVIYGDTDRYTV 1457
V AKVIYGDTD V
Sbjct: 708 VEAEYCVANGHSHDAKVIYGDTDSVMV 734
>gi|346974556|gb|EGY18008.1| DNA polymerase delta catalytic subunit [Verticillium dahliae VdLs.17]
Length = 1104
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 234/510 (45%), Gaps = 65/510 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A + I + + S I
Sbjct: 305 LRILSFDIECAGRKGIFPEANHDPVIQIANVVTRYGEKKPFIRNVFCLDTTS------SI 358
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V KE + + K L S DPD+++G++I +L +RA HL + SR
Sbjct: 359 VATQVLEFDKEEKMLKEWQKFLQSVDPDLIIGYNIANFDFPYLLDRAKHLKVAGFEYWSR 418
Query: 1077 TP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
P + S+ A ++ S + I G + + GR+
Sbjct: 419 IPSMPSR--AKETSFSSKQI-------------------------GNRDSKSTNTNGRLQ 451
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ +L++ + L YT+ +V L + + ++T+ F P +R R Y +
Sbjct: 452 LDLLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKD 510
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L +M++L + +E+ARV G F +L+RG Q R S L R A Q + P
Sbjct: 511 AYLPQRLMDKLSCLENYTEMARVTGAPFNMLLARGQQVRFISQLFRKALEQKL--VIPNM 568
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
AS E V+EP G+Y P+ LDF SLYPS+M A+NLC+ T + K K
Sbjct: 569 KSEASDEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTIVDKKAIEK-- 625
Query: 1316 TLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
LG+ KDE ++ P G +V K RKG+L ++LEE+L+ R KQA +
Sbjct: 626 -LGLK------------KDEDYIVTPAGNTFVTAKQRKGLLAQILEELLAAR---KQAKR 669
Query: 1375 KLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK- 1432
+LA + + N RQLALK+ AN YG T A +G++PC E+A S GR +EK
Sbjct: 670 ELAVETDPFKKAVLNGRQLALKVSANSVYGLTGAT-TGKLPCLEIASSTTSFGRQMIEKT 728
Query: 1433 -----AISFVNENEKWKAKVIYGDTDRYTV 1457
A + A+VIYGDTD V
Sbjct: 729 KEEVEAKYTIANGYSHDAQVIYGDTDSVMV 758
>gi|409040940|gb|EKM50426.1| hypothetical protein PHACADRAFT_104509 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1068
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 231/510 (45%), Gaps = 65/510 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSL 1013
L +LS +++ R + P+P+ D I + ++ H ++ L C SH +
Sbjct: 269 LRILSFDIECAGRKGIFPEPQVDPVIQIASMVTRQGETHPFIRNVFTLSTC---SH---I 322
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG +V E+ + + + + DPD+++G++I L +L +RA +
Sbjct: 323 VG---SQVLSFDSEVDMLNAWRDFVNEIDPDVIIGYNIANFDLPYLIDRAIAVKAKDFPM 379
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R +E K ++ S + +G+ + + GR
Sbjct: 380 LGRM-IEVKAQTKETHFSSKA-------------------------FGQRDSKETALDGR 413
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ +++ + M+ E KL YT+ +V L + + V+T+ GP +R R Y +
Sbjct: 414 LQIDILQYMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITELQNGGP-ESRRRLAVYCL 472
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L +M++L E+ARV G+ F +LSRG +V S L R A+ + Y + P
Sbjct: 473 KDAYLPQRLMDKLMCFINYIEMARVTGVPFNYLLSRGQSIKVLSQLFRKANEEEY--VVP 530
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
+ E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 531 ALRGEGTDEQYEG-ATVIEPHKGYYKAPIATLDFASLYPSIMMAHNLCYTTLLDK----- 584
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
T+ D+ ++ PN + K RKG+LP +LE+++STR K +
Sbjct: 585 -GTIDRLGLEKDVDYIQ--------TPNNDFFATAKRRKGLLPIILEDLISTRKRAKADL 635
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK- 1432
KK + + + RQLALK+ AN YG+T A G++PC ++ S GR +EK
Sbjct: 636 KK--ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLPISSSTTAFGRQMIEKT 692
Query: 1433 -----AISFVNENEKWKAKVIYGDTDRYTV 1457
A + A+VIYGDTD V
Sbjct: 693 KQEVEAEYCIANGHAHDAEVIYGDTDSVMV 722
>gi|328865112|gb|EGG13498.1| DNA polymerase delta catalytic subunit [Dictyostelium fasciculatum]
Length = 1801
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 242/511 (47%), Gaps = 74/511 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R + P+P D + +A +N + I + K S+ +VG
Sbjct: 1014 ILSFDIECAGRKGVFPEPGEDPVIQIANLVKNQGESEPFIKNVFTLKGCSN---IVG--- 1067
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
V E L + K + DPDI++G++I L +L ER+ L IG D S
Sbjct: 1068 AHVLTHPDEKSLLREWRKFIIKVDPDIIIGYNIANFDLPYLIERSRALKIG---DFS--- 1121
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
L S+I S+I + + L G + + GR L++
Sbjct: 1122 LLSRIKTTHSKIKKATFSSQNL--------------------GTREGKEVSMPGRTQLDI 1161
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
+ ++ + KL+ Y++ V+ L+ + + + ++ +G R R Y + A+L
Sbjct: 1162 IQAIQRDHKLSSYSLNNVSAHFLKEQKEDVHYSIIAD-LQNGTDDDRRRLAVYCIKDAQL 1220
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP--GNH 1256
L+++++L ++ +E++RV G+ +L RG +V S L R A ++ L + +
Sbjct: 1221 PLKLLDKLMILINYAEMSRVTGVPLSYLLGRGEGIKVVSQLYRKAMEEDLLLPTKRVSDV 1280
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
V+ Q A V++P+ GFY +P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 1281 DVSFQGAY-----VIDPQVGFYDEPIATLDFTSLYPSIMMAHNLCYTTLLTAADKEKVD- 1334
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
++ + P+G ++ P RKG+LP++LEE+L R K+A L
Sbjct: 1335 ----------------PNDYTLTPSGSAFIKPSHRKGILPKILEELLGAR---KKAKDDL 1375
Query: 1377 APSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ R + + RQLALK+ AN YG+T A G++PC +++ S+ GR L+ +
Sbjct: 1376 KNEKDPFKRAVLDGRQLALKISANSVYGFTGARV-GKLPCLDISRSVTAFGRVMLDTTKN 1434
Query: 1436 FVN---------ENEKWKAKVIYGDTDRYTV 1457
+V EN+ AK+IYGDTD V
Sbjct: 1435 YVENTYTIANGYEND---AKIIYGDTDSVMV 1462
>gi|302421082|ref|XP_003008371.1| DNA polymerase delta catalytic subunit [Verticillium albo-atrum
VaMs.102]
gi|261351517|gb|EEY13945.1| DNA polymerase delta catalytic subunit [Verticillium albo-atrum
VaMs.102]
Length = 1055
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 235/510 (46%), Gaps = 65/510 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A + I + + S I
Sbjct: 256 LRILSFDIECAGRKGIFPEANHDPVIQIANVVTRYGEKKPFIRNVFCLDTTS------SI 309
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V KE + + K L S DPD+++G++I +L +RA HL + SR
Sbjct: 310 VATQVLEFDKEEKMLKEWQKFLQSVDPDLIIGYNIANFDFPYLLDRAKHLKVAGFEYWSR 369
Query: 1077 TP-LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
P + S+ A ++ S + I G + + GR+
Sbjct: 370 IPSMPSR--AKETSFSSKQI-------------------------GNRDSKSTNTNGRLQ 402
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ +L++ + L YT+ +V L + + ++T+ F P +R R Y +
Sbjct: 403 LDLLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKD 461
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L +M++L + +E+ARV G F +L+RG Q R S L R A Q + P
Sbjct: 462 AYLPQRLMDKLSCLENYTEMARVTGAPFNMLLARGQQVRFISQLFRKALEQKL--VIPNM 519
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
AS E V+EP G+Y P+ LDF SLYPS+M A+NLC+ T + K K
Sbjct: 520 KSEASDEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTIVDKKAIEK-- 576
Query: 1316 TLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
LG+ KDE ++ P G +V K RKG+L ++LEE+L+ R KQA +
Sbjct: 577 -LGLK------------KDEDYIVTPAGNTFVTAKQRKGLLAQILEELLAAR---KQAKR 620
Query: 1375 KLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK- 1432
+LA + + + N RQLALK+ AN YG T A +G++PC E+A S GR +EK
Sbjct: 621 ELAVATDPFKKAVLNGRQLALKVSANSVYGLTGAT-TGKLPCLEIASSTTSFGRQMIEKT 679
Query: 1433 -----AISFVNENEKWKAKVIYGDTDRYTV 1457
A + A+VIYGDTD V
Sbjct: 680 KEEVEAKYTIANGYSHDAQVIYGDTDSVMV 709
>gi|336380987|gb|EGO22139.1| hypothetical protein SERLADRAFT_451027 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1062
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 228/507 (44%), Gaps = 58/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P+ D + +A D I + S SH +VG
Sbjct: 265 LRILSFDIECAGRKGIFPEPQMDPVIQIANMVTRQGDSQPFIRNIFTLNSCSH---IVG- 320
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E + + + DPD+++G++I +L +RA HL + R
Sbjct: 321 --SQVLSFKDEGAMLQAWRDFIEEADPDVVIGYNISNFDFPYLLDRAKHLKAAKFPYLGR 378
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
SK D+ S + +G+ + + GR+ L
Sbjct: 379 IK-NSKTQVKDTHFSSKA-------------------------YGQRDSKETVLDGRLQL 412
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ + M+ E KL YT+ +V L + + V+T+ +G +R R Y + A
Sbjct: 413 DILQFMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITE-LQNGTPESRRRLAVYCLKDA 471
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L ++++L E++RV G+ F +LSRG +V S L R A+ + Y + P
Sbjct: 472 YLPQRLLDKLMCFVNYIEMSRVTGVPFNFLLSRGQSIKVLSQLFRKANEEGY--VVPALL 529
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+ V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 530 KGEGTDEQYEGATVIEPKKGYYDSPIATLDFSSLYPSIMMAHNLCYTTLLDKTTIDR--- 586
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
L +++D+ + + PN + RKG+LP +LE+++S R K +KK
Sbjct: 587 ---------LQLVKDV--DYIQTPNNDFFATTSRRKGLLPTVLEDLISARKRAKADLKK- 634
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK---- 1432
+ + + RQLALK+ AN YG+T A G++PC ++ S+ GR +EK
Sbjct: 635 -ETDPFKCAVLDGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTSYGRQMIEKTKQE 692
Query: 1433 --AISFVNENEKWKAKVIYGDTDRYTV 1457
A V A+VIYGDTD V
Sbjct: 693 VEAEYCVANGHDHNAEVIYGDTDSVMV 719
>gi|357157316|ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Brachypodium
distachyon]
Length = 1106
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 146/506 (28%), Positives = 244/506 (48%), Gaps = 61/506 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R P+P +D + +A + + ++ KS S +VG+ D
Sbjct: 317 ILSFDIECAGRKGHFPEPTHDPVIQIANLLTLQGEAQPFVRNVMTLKSCS---PIVGV-D 372
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
F ++I L + ++ DPDI++G++I L +L ERA L I P
Sbjct: 373 VMSFDTERDILL--AWRDLIREADPDIIIGYNICKFDLPYLIERAEVL------KIVEFP 424
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
L +I +S + R T N ++G + + V GR+ ++
Sbjct: 425 LLGRIR--NSRVRVRDTTFN------------------SRQYGVRESKDVTVEGRVQFDL 464
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
+ ++ + KL+ Y++ +V+ L + + +++ +G R R Y + A L
Sbjct: 465 LQAVQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISD-LQNGNSETRRRLAVYCLKDAYL 523
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
++++L I E+ARV G+ +LSRG +V S LLR A +N L I Q
Sbjct: 524 PQRLLDKLMYIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQRN-LVIPNIKGQG 582
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLG 1318
+ Q E V+E +GFY P+ LDF SLYPS+M+A+NLC+CT ++P +
Sbjct: 583 SGQDTFEG-ATVLEARAGFYEKPIATLDFASLYPSIMMAHNLCYCT----LVPPE----- 632
Query: 1319 VSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP 1378
D+ L + L P+G ++V P+++KG+LP +LEE+L+ R K+A L
Sbjct: 633 ------DVRKLNLPPESLYKTPSGEIFVKPELQKGILPEILEELLTAR---KRAKADLKE 683
Query: 1379 SQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
++ R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E V
Sbjct: 684 AKDPFERAVLDGRQLALKISANSVYGFTGATV-GQLPCLEISSSVTSYGRQMIEHTKKLV 742
Query: 1438 NEN------EKWKAKVIYGDTDRYTV 1457
+ + A+VIYGDTD V
Sbjct: 743 EDKFTTLGGYEHNAEVIYGDTDSVMV 768
>gi|310792587|gb|EFQ28114.1| DNA polymerase family B [Glomerella graminicola M1.001]
Length = 1103
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 206/439 (46%), Gaps = 55/439 (12%)
Query: 1026 KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAA 1085
KE + S + K L DPDIL+G++I +L +RA HL + SR P
Sbjct: 367 KEEKMLSEWQKFLIKVDPDILIGYNIANFDFPYLLDRAKHLKVPGFEYWSRIP------- 419
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
+ R N ++ + G + + GR+ L++ +L++ +
Sbjct: 420 ---SMPSRAKETNFSSK----------------QMGNRDSKATNTNGRLQLDLLQLVQRD 460
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
L YT+ +V L + + ++T+ F P +R R Y + A L +M++
Sbjct: 461 YHLRSYTLNSVCSQFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKDAYLPQRLMDK 519
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
L + +E+ARV GI F +LSRG Q + S L R A Q + P + E
Sbjct: 520 LSCLENYTEMARVTGIPFNFLLSRGQQVKFISQLFRKALEQKL--VIPNMRSEGTDEQYE 577
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPD 1325
V+EP G+Y P+ LDF SLYPS+M A+NLC+ T + K K
Sbjct: 578 G-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLVNKKAIEK------------ 624
Query: 1326 LHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR 1385
+ +D D+ ++ PNG +V K RKG+L ++LEE+L+ R KQA ++LA +
Sbjct: 625 FQLKKD--DDYIVTPNGDTFVTTKQRKGLLAQILEELLTAR---KQAKRELAMETDPFKK 679
Query: 1386 -IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN---- 1440
+ N RQLALK+ AN YG T A +G++PC E+A S GR + K V +
Sbjct: 680 AVLNGRQLALKISANSVYGLTGAT-TGKLPCLEIASSTTSFGRQMIMKTKEEVEKKYCIA 738
Query: 1441 --EKWKAKVIYGDTDRYTV 1457
A+VIYGDTD V
Sbjct: 739 NGYSHDAQVIYGDTDSVMV 757
>gi|403171115|ref|XP_003330341.2| DNA polymerase delta subunit 1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169039|gb|EFP85922.2| DNA polymerase delta subunit 1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1055
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 230/506 (45%), Gaps = 61/506 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R + PD R D + +A I + + SH I
Sbjct: 272 VLSYDIECSGRKGVFPDARLDPVIQIANMVTAHGSTVPFIRNVFTLNTCSH------IAG 325
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
+V E L + + + DPD+++G++ + +L +RA L + + R
Sbjct: 326 SQVLEFKSEDQLLAKWQAFVAECDPDLVIGYNTSNFDMPYLLDRAKALKVASFPYLGRMR 385
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
S+ A ++ S + +G + H+ GR+ L++
Sbjct: 386 -NSQTAVKETHFSSKA-------------------------YGTRDSKETHLDGRLQLDL 419
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
++M+ + KL YT+ +V L + + ++T +G R R Y + A L
Sbjct: 420 LQVMQRDYKLRSYTLNSVCAHFLGEQKEDVHHSIITD-LQNGSAETRRRLAVYCLKDAYL 478
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
+M++L +E+ARV G+ F +LSRG Q +V S L R A+ +YL + H+
Sbjct: 479 PQRLMDKLMCFVNYTEMARVTGVPFNYLLSRGQQIKVVSQLYRRANEHSYL-VPALKHEG 537
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLG 1318
+ +P VMEP GFY P+ LDF SLYPS+M+A+NLC+ T + T+
Sbjct: 538 SDEPYDGAT--VMEPVRGFYDVPIATLDFASLYPSIMMAHNLCYTTL------TDAKTVK 589
Query: 1319 VSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP 1378
+ R D ++ +I PNG +V RKG+L +LE++LS R K+A +L
Sbjct: 590 LLELRQD--------EDFIITPNGDYFVKASKRKGLLAIVLEDLLSAR---KRARAELKL 638
Query: 1379 SQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL-----EK 1432
R + + RQLALK+ AN YG+T A G++PC ++ S+ GR + E
Sbjct: 639 ETDPFKRAVLDGRQLALKISANSVYGFTGATV-GKLPCLPISMSVTAFGREMIKITKNEV 697
Query: 1433 AISFVNEN-EKWKAKVIYGDTDRYTV 1457
+ + N A+VIYGDTD V
Sbjct: 698 ELKYTKANGYDDDAEVIYGDTDSVMV 723
>gi|380488089|emb|CCF37614.1| DNA polymerase delta catalytic subunit [Colletotrichum higginsianum]
Length = 1103
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 146/508 (28%), Positives = 230/508 (45%), Gaps = 61/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L ++S +++ R + P+ +D + +A + + + + S I
Sbjct: 304 LRIMSFDIECAGRKGIFPEATHDPVIQIANVVTRYGEKKPFVRNVFCLDTTS------PI 357
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ KE + S + K L DPDIL+G++I +L +RA HL + SR
Sbjct: 358 VATQILDFQKEEKMLSEWQKFLIKVDPDILIGYNIANFDFPYLLDRAKHLKVSGFEYWSR 417
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P + R N ++ + G + + GR+ L
Sbjct: 418 IP----------SMPSRAKETNFSSK----------------QMGNRDSKATNTNGRLQL 451
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + L YT+ +V L + + ++T+ F P +R R Y + A
Sbjct: 452 DLLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKDA 510
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E+ARV GI F +LSRG Q + S L R A Q + P
Sbjct: 511 YLPQRLMDKLSCLENYTEMARVTGIPFNFLLSRGQQVKFISQLFRKALEQKL--VIPNMR 568
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP G+Y PV LDF SLYPS+M A+NLC+ T + K K
Sbjct: 569 SEGSDEQYEG-ATVIEPTRGYYDVPVATLDFASLYPSIMQAHNLCYTTLVNKKAIEK--- 624
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ +D ++ ++ PNG +V K RKG+L ++LEE+LS R KQA ++L
Sbjct: 625 ---------FQLKKD--EDYIVTPNGDTFVTNKQRKGLLAQILEELLSAR---KQAKREL 670
Query: 1377 APSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
A + + N RQLALK+ AN YG T A +G++PC E+A S GR + K
Sbjct: 671 AVETDPFKKAVLNGRQLALKISANSVYGLTGAT-TGKLPCLEIASSTTSFGRQMIMKTKE 729
Query: 1436 FVNEN------EKWKAKVIYGDTDRYTV 1457
V + A+VIYGDTD V
Sbjct: 730 EVEKKYCIANGYSHDAQVIYGDTDSVMV 757
>gi|302663472|ref|XP_003023378.1| Catalytic subunit of DNA polymerase delta [Trichophyton verrucosum
HKI 0517]
gi|291187372|gb|EFE42760.1| Catalytic subunit of DNA polymerase delta [Trichophyton verrucosum
HKI 0517]
Length = 1111
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 239/511 (46%), Gaps = 66/511 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R + P+P D + +A + ++V+ C S
Sbjct: 312 LRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKPFVRNVFVMDTCSS------- 364
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I + +V KE ++ + + DPD+++G++I +L +RA +L +
Sbjct: 365 --IVNTQVLEFDKEENMLMAWRDFVEKVDPDVIIGYNIANFDFPYLLDRARYL------N 416
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ P S++ +G+ +S K + + G+ + + GR
Sbjct: 417 CLKFPYWSRL---------KGV-----------QSHATKTSFASKQMGKRDSKATNTNGR 456
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I L++ +L++ + L YT+ +V L + + ++T+ + P +R R Y +
Sbjct: 457 IQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITELYNGTPD-SRRRLAVYCL 515
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q +
Sbjct: 516 KDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLARGQQIKFISQLFRKALEQKLVIPDL 575
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
N ++Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L K K
Sbjct: 576 KNDDNSNQQYEGA--TVIEPVRDYYPVPIATLDFASLYPSIIQAHNLCYTTLLSKRTVEK 633
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
LG+ ++ ++ PN M+ KVRKG+L ++LEE+L+ R K+A
Sbjct: 634 ---LGLKK-----------GEDYIVTPNDDMFCTTKVRKGLLSQILEELLTAR---KRAK 676
Query: 1374 KKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
++LA + + + N RQLALK+ AN YG T A +G++PC +A S GR +EK
Sbjct: 677 RELAVEKDPFKKAVLNGRQLALKISANSVYGITGAT-NGKLPCLPIASSTTSYGRQMIEK 735
Query: 1433 ------AISFVNENEKWKAKVIYGDTDRYTV 1457
A ++ AKVIYGDTD V
Sbjct: 736 TKDEVEARYTISNGYTHDAKVIYGDTDSVMV 766
>gi|336368221|gb|EGN96564.1| hypothetical protein SERLA73DRAFT_58496 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1084
Score = 174 bits (441), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 232/507 (45%), Gaps = 53/507 (10%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P+ D + +A D I + S SH +VG
Sbjct: 282 LRILSFDIECAGRKGIFPEPQMDPVIQIANMVTRQGDSQPFIRNIFTLNSCSH---IVG- 337
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E + + + DPD+++G++I +L +RA HL ++
Sbjct: 338 --SQVLSFKDEGAMLQAWRDFIEEADPDVVIGYNISNFDFPYLLDRAKHL------KAAK 389
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P +I + S++ + D + +G+ + + GR+ L
Sbjct: 390 FPYLGRIKSMFSQLLALFVKDTHFSSKA---------------YGQRDSKETVLDGRLQL 434
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ + M+ E KL YT+ +V L + + V+T+ +G +R R Y + A
Sbjct: 435 DILQFMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITE-LQNGTPESRRRLAVYCLKDA 493
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L ++++L E++RV G+ F +LSRG +V S L R A+ + Y + P
Sbjct: 494 YLPQRLLDKLMCFVNYIEMSRVTGVPFNFLLSRGQSIKVLSQLFRKANEEGY--VVPALL 551
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+ V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 552 KGEGTDEQYEGATVIEPKKGYYDSPIATLDFSSLYPSIMMAHNLCYTTLLDKTTIDR--- 608
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
L +++D+ + + PN + RKG+LP +LE+++S R K +KK
Sbjct: 609 ---------LQLVKDV--DYIQTPNNDFFATTSRRKGLLPTVLEDLISARKRAKADLKK- 656
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK---- 1432
+ + + RQLALK+ AN YG+T A G++PC ++ S+ GR +EK
Sbjct: 657 -ETDPFKCAVLDGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTSYGRQMIEKTKQE 714
Query: 1433 --AISFVNENEKWKAKVIYGDTDRYTV 1457
A V A+VIYGDTD V
Sbjct: 715 VEAEYCVANGHDHNAEVIYGDTDSVMV 741
>gi|327300054|ref|XP_003234720.1| DNA polymerase subunit delta large [Trichophyton rubrum CBS 118892]
gi|326463614|gb|EGD89067.1| DNA polymerase subunit delta large [Trichophyton rubrum CBS 118892]
Length = 1111
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 239/511 (46%), Gaps = 66/511 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R + P+P D + +A + ++V+ C S
Sbjct: 312 LRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKPFVRNVFVMDTCSS------- 364
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I + +V KE ++ + + DPD+++G++I +L +RA +L +
Sbjct: 365 --IVNTQVLEFDKEENMLMAWRDFVEKVDPDVIIGYNIANFDFPYLLDRARYL------N 416
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ P S++ +G+ +S K + + G+ + + GR
Sbjct: 417 CLKFPYWSRL---------KGV-----------QSHATKTSFASKQMGKRDSKATNTNGR 456
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I L++ +L++ + L YT+ +V L + + ++T+ + P +R R Y +
Sbjct: 457 IQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITELYNGTPD-SRRRLAVYCL 515
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q +
Sbjct: 516 KDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLARGQQIKFISQLFRKALEQKLVIPDL 575
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
N ++Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L K K
Sbjct: 576 KNDDNSNQQYEGA--TVIEPVRDYYPVPIATLDFASLYPSIIQAHNLCYTTLLSKRTVEK 633
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
LG+ ++ ++ PN M+ KVRKG+L ++LEE+L+ R K+A
Sbjct: 634 ---LGLKK-----------GEDYIVTPNDDMFCTAKVRKGLLSQILEELLAAR---KRAK 676
Query: 1374 KKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
++LA + + + N RQLALK+ AN YG T A +G++PC +A S GR +EK
Sbjct: 677 RELAVEKDPFKKAVLNGRQLALKISANSVYGITGAT-NGKLPCLPIASSTTSYGRQMIEK 735
Query: 1433 ------AISFVNENEKWKAKVIYGDTDRYTV 1457
A ++ AKVIYGDTD V
Sbjct: 736 TKEEVEARYTISNGYTHDAKVIYGDTDSVMV 766
>gi|429852563|gb|ELA27695.1| DNA polymerase delta catalytic subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 1102
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/439 (30%), Positives = 208/439 (47%), Gaps = 55/439 (12%)
Query: 1026 KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAA 1085
KE + S + K L DPDI++G++I +L +RA HL + SR P
Sbjct: 368 KEEKMLSEWQKFLVKVDPDIIIGYNIANFDFPYLLDRARHLKVNGFEYWSRIP------- 420
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
I+ + N ++ + G + GR+ L++ +L++ +
Sbjct: 421 ---SIASKAKETNFSSK----------------QMGNRDTKATNTNGRLQLDLLQLVQRD 461
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
L YT+ +V L + + ++T+ F P +R R Y + A L +M++
Sbjct: 462 HHLRSYTLNSVCSNFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKDAYLPQRLMDK 520
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
L + +E+ARV GI F +LSRG Q + S L R A Q + P +S E
Sbjct: 521 LSCLENYTEMARVTGIPFNFLLSRGQQVKFISQLFRKALEQKL--VIPNLRSESSDEQYE 578
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPD 1325
V+EP G+Y P+ LDF SLYPS+M A+NLC+ T + K K
Sbjct: 579 G-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLVNKKAIEK------------ 625
Query: 1326 LHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR 1385
+++D ++ ++ PNG +V K RKG+L ++LEE+L+ R KQA ++LA +
Sbjct: 626 FSLVKD--EDYIVTPNGDTFVTVKKRKGLLAQILEELLAAR---KQAKRELAVETDPFKK 680
Query: 1386 -IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN---- 1440
+ N RQLALK+ AN YG T A +G++PC E+A S GR + K V +
Sbjct: 681 AVLNGRQLALKISANSVYGLTGAT-TGKLPCLEIASSTTSFGRQMIMKTKEEVEKKYCIA 739
Query: 1441 --EKWKAKVIYGDTDRYTV 1457
A+VIYGDTD V
Sbjct: 740 NGYSHDAQVIYGDTDSVMV 758
>gi|238584859|ref|XP_002390692.1| hypothetical protein MPER_09992 [Moniliophthora perniciosa FA553]
gi|215454400|gb|EEB91622.1| hypothetical protein MPER_09992 [Moniliophthora perniciosa FA553]
Length = 217
Score = 174 bits (440), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 119/161 (73%), Gaps = 3/161 (1%)
Query: 1295 MIAYNLCFCTCLGKILPSK-ENTLGVSSFRPDLHVLRD-LKDELLIPPNGVMYVPPKVRK 1352
M++ N C+ TCLG+++ + +N GV P + L D L++ +++ PNG+++V +VR+
Sbjct: 1 MVSRNYCYSTCLGRVVDFQGKNKFGVVDELPRVPGLLDKLQEHIIVSPNGLIFVKSRVRQ 60
Query: 1353 GVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGR 1412
G+LPR+L E+L TR+MVK A+K + S +IL RI NARQL LK IANVTYGYT+A FSGR
Sbjct: 61 GLLPRMLTELLDTRVMVKTAMKGVK-SDKILTRIMNARQLGLKYIANVTYGYTSASFSGR 119
Query: 1413 MPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
MP E+AD+IVQ GR TL+KAI +++ KW A+V+YGDTD
Sbjct: 120 MPAVEIADAIVQAGRETLKKAIRLIHQTTKWNAEVVYGDTD 160
>gi|190344317|gb|EDK35969.2| hypothetical protein PGUG_00067 [Meyerozyma guilliermondii ATCC 6260]
Length = 1075
Score = 174 bits (440), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/514 (25%), Positives = 235/514 (45%), Gaps = 74/514 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ ++D + +A V Y + R++ +
Sbjct: 283 LRILSFDIECSGRKGIFPEAQHDPVIQIANV------------VSKYGEQRPFIRNVFTV 330
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + S+ E + H+ + + DPD+++G++ L +L +RA LG+
Sbjct: 331 NTCASIIGSQILEHKTEEQMLLHWRQFIEESDPDVIIGYNTTNFDLPYLLDRANALGL-- 388
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLH 1129
P ++ + E+ KD++ +G ++
Sbjct: 389 ----KEFPYFGRLKSVRQEV---------------------KDSVFSSRAYGTRENKVVN 423
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GR+ L++ + ++ E KL YT+ +V+ L + + +++ +G R R
Sbjct: 424 IDGRMQLDLLQFVQREYKLRSYTLNSVSAHFLGEQKEDVQHTIISD-LQNGTRETRRRLA 482
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L + ++ +L + +E+ARV G+ F +L+RG Q +V S L R ++
Sbjct: 483 VYCLKDAYLPMRLLEKLMCLVNYTEMARVTGVPFSYLLARGQQIKVISQLFRKCLQED-- 540
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ P + E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 541 VVIPNMKSEGTNEEYEG-ATVIEPVRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLSK- 598
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
N++ + KD+ + PNG +V RKG+LP +L E++S R
Sbjct: 599 -----NSIAAFNLS---------KDDYTLTPNGDYFVKEHKRKGILPTILHELISARKKA 644
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + + N RQLALK+ AN YG+T A G++PC ++ S+ GR
Sbjct: 645 KVDLKN--ETDPFRKDVLNGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAFGRVM 701
Query: 1430 LEKAIS-----FVNEN-EKWKAKVIYGDTDRYTV 1457
+E+ + + EN + A+VIYGDTD V
Sbjct: 702 IEETKNEVQSRYTTENGYDYDAQVIYGDTDSVMV 735
>gi|226289255|gb|EEH44767.1| DNA polymerase delta catalytic subunit [Paracoccidioides brasiliensis
Pb18]
Length = 1110
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 241/515 (46%), Gaps = 75/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y +S+ R++ +
Sbjct: 312 LRILSFDIECAGRKGVFPEANQDPVIQIANV------------VTRYGESKPFVRNVFVL 359
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V ++ E + + + L DPD+++G++I +L +RA HL
Sbjct: 360 DTCSLIVNTQILEFDTEEKMLMAWKEFLVEVDPDVIIGYNIANFDFPYLIKRAEHLKCRE 419
Query: 1071 LNDISR-TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
SR T + S++ GD+ S + I G + +
Sbjct: 420 FPFWSRLTQVASRV--GDARFSSKQI-------------------------GNRESKSTN 452
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GRI L++ +L++ + +L YT+ +V L + + ++T+ F +G +R R
Sbjct: 453 ISGRIQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITELF-NGTADSRRRLA 511
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++ + +E+ARV G+ F +LSRG Q + S L R A Q +
Sbjct: 512 VYCLKDAYLPQRLMDKFMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQQLV 571
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ N + Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 572 IPNLRNEATSEQYEGAT---VIEPLRAYYDVPIATLDFASLYPSIIQAHNLCYTTLL--- 625
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K++T+ + H +++ +D ++ PNG + KVRKG+L ++LEE+L R
Sbjct: 626 ---KKSTI-------EAHGMKEGED-YIVTPNGDRFCTAKVRKGLLTQILEELLGAR--- 671
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 672 KRAKKELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATV-GKLPCLPIASSTTSYGRQ 730
Query: 1429 TLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + A+V+YGDTD V
Sbjct: 731 MIEKTKEEVEAKYTIANGYSNDAQVVYGDTDSVMV 765
>gi|225682079|gb|EEH20363.1| DNA polymerase delta catalytic subunit [Paracoccidioides brasiliensis
Pb03]
Length = 1110
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 241/515 (46%), Gaps = 75/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y +S+ R++ +
Sbjct: 312 LRILSFDIECAGRKGVFPEANQDPVIQIANV------------VTRYGESKPFVRNVFVL 359
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V ++ E + + + L DPD+++G++I +L +RA HL
Sbjct: 360 DTCSLIVNTQILEFDTEEKMLMAWKEFLVEVDPDVIIGYNIANFDFPYLIKRAEHLKCRE 419
Query: 1071 LNDISR-TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
SR T + S++ GD+ S + I G + +
Sbjct: 420 FPFWSRLTQVASRV--GDARFSSKQI-------------------------GNRESKSTN 452
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GRI L++ +L++ + +L YT+ +V L + + ++T+ F +G +R R
Sbjct: 453 ISGRIQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITELF-NGTADSRRRLA 511
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++ + +E+ARV G+ F +LSRG Q + S L R A Q +
Sbjct: 512 VYCLKDAYLPQRLMDKFMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQQLV 571
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ N + Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 572 IPNLRNEATSEQYEGAT---VIEPLRAYYDVPIATLDFASLYPSIIQAHNLCYTTLL--- 625
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K++T+ + H +++ +D ++ PNG + KVRKG+L ++LEE+L R
Sbjct: 626 ---KKSTI-------EAHGMKEGED-YIVTPNGDRFCTAKVRKGLLTQILEELLGAR--- 671
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 672 KRAKKELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATV-GKLPCLPIASSTTSYGRQ 730
Query: 1429 TLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + A+V+YGDTD V
Sbjct: 731 MIEKTKEEVEAKYTIANGYSNDAQVVYGDTDSVMV 765
>gi|302497097|ref|XP_003010549.1| Catalytic subunit of DNA polymerase delta [Arthroderma benhamiae CBS
112371]
gi|291174092|gb|EFE29909.1| Catalytic subunit of DNA polymerase delta [Arthroderma benhamiae CBS
112371]
Length = 1111
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 239/511 (46%), Gaps = 66/511 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R + P+P D + +A + ++V+ C S
Sbjct: 312 LRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKPFVRNVFVMDTCSS------- 364
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I + +V KE ++ + + DPD+++G++I +L +RA +L +
Sbjct: 365 --IVNTQVLEFDKEENMLMAWRDFVEKVDPDVIIGYNIANFDFPYLLDRARYL------N 416
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ P S++ +G+ +S K + + G+ + + GR
Sbjct: 417 CLKFPYWSRL---------KGV-----------QSHATKTSFASKQMGKRDSKATNTNGR 456
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I L++ +L++ + L YT+ +V L + + ++T+ + P +R R Y +
Sbjct: 457 IQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITELYNGTPD-SRRRLAVYCL 515
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L +M++L + +E+ARV G+ F +L+RG Q + S L R A Q +
Sbjct: 516 KDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLARGQQIKFISQLFRKALEQKLVIPDL 575
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
N ++Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L K K
Sbjct: 576 KNDDNSNQQYEGA--TVIEPVRDYYPVPIATLDFASLYPSIIQAHNLCYTTLLSKRTVEK 633
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
LG+ ++ ++ PN M+ K+RKG+L ++LEE+L+ R K+A
Sbjct: 634 ---LGLKK-----------GEDYIVTPNDDMFCTAKIRKGLLSQILEELLTAR---KRAK 676
Query: 1374 KKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
++LA + + + N RQLALK+ AN YG T A +G++PC +A S GR +EK
Sbjct: 677 RELAVEKDPFKKAVLNGRQLALKISANSVYGITGAT-NGKLPCLPIASSTTSYGRQMIEK 735
Query: 1433 ------AISFVNENEKWKAKVIYGDTDRYTV 1457
A ++ AKVIYGDTD V
Sbjct: 736 TKDEVEARYTISNGYTHDAKVIYGDTDSVMV 766
>gi|156844887|ref|XP_001645504.1| hypothetical protein Kpol_1004p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156116168|gb|EDO17646.1| hypothetical protein Kpol_1004p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 1096
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 230/513 (44%), Gaps = 71/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+P +DS+ NVV++A ++ + C
Sbjct: 314 LRILSFDIECAGRVGVFPEPEHDSVIQIANVVSIAGAKKP-FIRNVFTVDTCSP------ 366
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +F E + S + + + DPD+++G++ L +L +RA L
Sbjct: 367 ---ITGSHIFSHETEKEMLSKWREFIVKVDPDLIIGYNSANFDLPYLIDRAKAL------ 417
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
I P ++ E+ E + +G + +++ G
Sbjct: 418 KIDNFPYFGRLFNVKQEVKESSFSSKA--------------------YGTRTSKVVNIDG 457
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ + ++ E KL YT+ AV+ L + + ++T +G R R Y
Sbjct: 458 RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHHSIITD-LQNGDSETRRRLAVYC 516
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L ++ L + +E++RV G+ F +LSRG Q +V S L R + I
Sbjct: 517 LKDAYLPLRLLENLMALVNYTEMSRVTGVPFSYLLSRGQQIKVVSQLFRKC-----IEID 571
Query: 1253 PGNHQVASQPAMECL--PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
+ASQ + V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T K
Sbjct: 572 TVIPNMASQGTDQQYEGATVIEPIRGYYDIPIATLDFNSLYPSIMMAHNLCYTTLCNK-- 629
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
T+ + + D ++ +I PNG +V K+R G+LP +L E++ R K
Sbjct: 630 ----ETVQRLNLKKD--------EDYIITPNGDYFVSTKLRHGILPIILRELIDARKRAK 677
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+ +K + + N RQLALK+ AN YG+T A G++PC ++ S+ GR +
Sbjct: 678 KDLKN--ETDPFKKNVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGRDMI 734
Query: 1431 EKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+ V E K A V+YGDTD V
Sbjct: 735 MTTKNAVEEKYRISNGYKHDAVVVYGDTDSVMV 767
>gi|168019806|ref|XP_001762435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686513|gb|EDQ72902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1173
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 238/505 (47%), Gaps = 58/505 (11%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R P+P +D + +A + + ++ KS S +VG D
Sbjct: 368 ILSFDIECAGRKGHFPEPEHDPVIQIANLVTVQGEQRPMVKNVMTLKSCS---PIVG-AD 423
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
F KE+ L + +++ DPDI++G++I L +L ERA L + + R
Sbjct: 424 VMSFDTEKEVLL--AWRELVTEVDPDIIIGYNICKFDLPYLIERAQKLNVVEFPMLGRIR 481
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
S++ D+ S R ++G + + + GR+ ++
Sbjct: 482 -NSRLRIKDASFSSR-------------------------QYGIRESKEVTIEGRVQFDL 515
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
+ ++ + KL+ Y++ +V+ L + + +++ +G R R Y + A L
Sbjct: 516 LQAIQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISD-LQNGNSETRRRLAVYCLKDAYL 574
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
++++L + E+ARV G+ +L+RG +V S LLR + +N++ + +
Sbjct: 575 PQRLLDKLMFVYNYVEMARVTGVPISFLLARGQSIKVLSQLLRKSKQRNFVLPNVKSQGA 634
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLG 1318
E V++ ++G+Y P+ LDF SLYPS+M+AYNLC+CT +
Sbjct: 635 GGGETFEG-ATVLDAKAGYYDKPIATLDFASLYPSIMMAYNLCYCTLVRA---------- 683
Query: 1319 VSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP 1378
DL +E+ P+G ++V P + KG+LP +LEE+L+ R K +K+
Sbjct: 684 -----EDLQKFMLGPEEVTKTPSGDVFVKPSLEKGILPEILEELLAARKRAKADLKE--A 736
Query: 1379 SQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN 1438
+ + + + RQLALK+ AN YG+T A G++PC E++ S+ GR ++ V
Sbjct: 737 TDPLEKAVLDGRQLALKVSANSVYGFTGATV-GQLPCLEISSSVTSFGRQMIDHTKKLVQ 795
Query: 1439 E------NEKWKAKVIYGDTDRYTV 1457
E + + A+VIYGDTD V
Sbjct: 796 ERFNTSNSYSYDAEVIYGDTDSVMV 820
>gi|407396863|gb|EKF27570.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 1029
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 238/506 (47%), Gaps = 73/506 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LSI+++ + + L PDP D + +A N + A E R++ +
Sbjct: 234 ILSIDIECQGKKGLFPDPEDDPVIQIANHCINYGNEA-----------EPLTRTVFTLKS 282
Query: 1019 CK----VFVCSKEIH--LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
C VCS E + +++ + + DPDI G++I +L R A L N
Sbjct: 283 CGPIAGARVCSYETEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNRGAALKT---N 339
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D +I+ER + + + G + L + G
Sbjct: 340 D--------AFHYWGRQINERTVP--------------REKKFQSKQMGNREYTELTLEG 377
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R++L+V +++ + KL Y++ AV++ L + + +++ G R R Y
Sbjct: 378 RVILDVMVVIQRDYKLRSYSLNAVSQHFLGEQKEDVHHSIISD-LQQGSEETRRRLAVYC 436
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L ++++++L +I E+ARV G+ +L RG Q +V SM+LR A ++ L +
Sbjct: 437 LKDALLPVKLLDRLMVIVNNVEMARVTGVPIEWLLERGQQIKVFSMMLRKAKAKDLLVPA 496
Query: 1253 -----PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
G Q + A V+EP GFY P+V LDF SLYPS++IA+NLC+ T +
Sbjct: 497 VEYSGGGGDQRGYEGAT-----VIEPLKGFYNCPIVTLDFASLYPSIIIAHNLCYSTLV- 550
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
RP + R + L P G +V ++ G+LP +L+++L+ R
Sbjct: 551 ---------------RPS-DIARYPAEMLSRTPTGDTFVKKELFPGILPEVLQDLLAARK 594
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K +K + P + + +++ N RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 595 RAKSLMKDV-PMESLEYKVLNGRQLALKISANSVYGFTGAQI-GKLPCLEVSSSVTAYGR 652
Query: 1428 STLEKAISFVNENEKWKAKVIYGDTD 1453
+++ S V E+ KV+YGDTD
Sbjct: 653 LMIDQTKSLV-ESLYPGVKVVYGDTD 677
>gi|134117391|ref|XP_772922.1| hypothetical protein CNBK2930 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255540|gb|EAL18275.1| hypothetical protein CNBK2930 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1059
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 231/508 (45%), Gaps = 61/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + + +H +VG
Sbjct: 265 LRVLSFDIECAGRKGIFPEANVDPVIQIAAMVTRHGESKPFIRNVFTLNTCAH---IVG- 320
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E L + K + + DPD+++G++I L +L +RA L I
Sbjct: 321 --SQVLEFKDERQLLLEWRKFVDTVDPDMIIGYNISNFDLPYLLDRAKALKI-------- 370
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+ + G N+ E V E+ + A +G+ + +++ GR+ L
Sbjct: 371 -----------PDFAFLGRLRNVRTE--VKETHFSSKA-----YGQRDSKAVNMEGRLQL 412
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ + KL YT+ AV L + + ++T+ +G +R R Y + A
Sbjct: 413 DILQVMQRDYKLRSYTLNAVCAQFLGEQKEDVHHSIITE-LQNGTADSRRRLAVYCLKDA 471
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +LSRG Q +V S L R A Y + P
Sbjct: 472 YLPQRLMDKLMCFVNYTEMARVTGVPFNYLLSRGQQIKVISQLYRNAADAGY--VIPALK 529
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP GFY P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 530 SEGSDEQYEG-ATVIEPSKGFYDVPIATLDFASLYPSIMMAHNLCYTTLLDK-------- 580
Query: 1317 LGVSSFRPDLHVLRDLKDELLI-PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ L+ ++ E + PN + K RKG+LP +LE +L+ R KQ +K
Sbjct: 581 -------GTIERLKLVEGEDYVHTPNNDFFATSKRRKGLLPHILENLLAARKRAKQDLK- 632
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + RQLALK+ AN YG+T A G++PC ++ S+ GR +E
Sbjct: 633 -VEKDPFKRAVLDGRQLALKVSANSVYGFTGATV-GKLPCLAISSSVTAYGRQMIELTKK 690
Query: 1436 FVNENEKWK------AKVIYGDTDRYTV 1457
V K AK++YGDTD V
Sbjct: 691 EVEAEYSMKNGYDHDAKIVYGDTDSVMV 718
>gi|405119357|gb|AFR94130.1| delta DNA polymerase [Cryptococcus neoformans var. grubii H99]
Length = 1059
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 231/508 (45%), Gaps = 61/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + + + + +H +VG
Sbjct: 265 LRVLSFDIECAGRKGIFPEANVDPVIQIAAMVTRHGESKPFVRNVFTLNTCAH---IVG- 320
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E L + K + + DPD+++G++I L +L +RA L I
Sbjct: 321 --SQVLEFKDERRLLLEWRKFVETVDPDMIIGYNISNFDLPYLLDRAKALKI-------- 370
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+ + G N+ E V E+ + A +G+ + +++ GR+ L
Sbjct: 371 -----------PDFAFLGRLRNVRTE--VKETHFSSKA-----YGQRDSKAVNMEGRLQL 412
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ + KL YT+ AV L + + ++T+ +G +R R Y + A
Sbjct: 413 DILQVMQRDYKLRSYTLNAVCAQFLGEQKEDVHHSIITE-LQNGTADSRRRLAVYCLKDA 471
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +LSRG Q +V S L R A Y + P
Sbjct: 472 YLPQRLMDKLMCFVNYTEMARVTGVPFNYLLSRGQQIKVVSQLYRNAADAGY--VIPALK 529
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP GFY P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 530 SEGSDEQYEG-ATVIEPSKGFYDVPITTLDFASLYPSIMMAHNLCYTTLLD--------- 579
Query: 1317 LGVSSFRPDLHVLRDLKDELLI-PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
R + L+ ++ E + PN + K RKG+LP +LE +L+ R KQ +K
Sbjct: 580 ------RGTIERLKLVEGEDYVHTPNNDFFATSKRRKGLLPHILENLLAARKRAKQDLK- 632
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + RQLALK+ AN YG+T A G++PC ++ S+ GR +E
Sbjct: 633 -IEKDPFKRAVLDGRQLALKVSANSVYGFTGATI-GKLPCLAISSSVTAYGRQMIELTKK 690
Query: 1436 FVNENEKWK------AKVIYGDTDRYTV 1457
V K AKV+YGDTD V
Sbjct: 691 EVEAEYSMKNGYDHDAKVVYGDTDSVMV 718
>gi|219121567|ref|XP_002181135.1| DNA polymerase delta [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407121|gb|EEC47058.1| DNA polymerase delta [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1087
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 237/511 (46%), Gaps = 58/511 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS++++ + R P+ D + N ++L + D ++ L C
Sbjct: 274 LRILSVDIECQGRKGHFPEAEKDPVIQIANTISL-YGQDKPIVQNVFTLKGC-------- 324
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+ I +V +E + + L + DPDI+ G+++Q + +L +RA L G
Sbjct: 325 -LPIVGAQVICSDEEEDMLMKWRAFLEAADPDIITGYNVQNFDIPYLLDRADSLSKG--- 380
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ + +G ++ T + + + S K A +E + G
Sbjct: 381 ----SSHRKAVLSGFAQWGRVRNTKAKMRDTMFQSSAYGKRANVETT----------IDG 426
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R++ ++ M+ KL+ Y++ +V L ++ + +++ +G R+R Y
Sbjct: 427 RVIFDMLPYMQRNHKLSSYSLNSVCAEYLGQQKEDVHHSIISD-LQNGSDEDRHRLAVYC 485
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L +M++L ++ E+ARV G+ ++SRG Q +V SM+LR + L +
Sbjct: 486 LKDALLPQRLMDKLSVLVNYIEMARVTGVPMSFLISRGQQIKVFSMILRKCRHEKLLVPT 545
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
A+ V++P +Y P+ LDF SLYPS+M AYNLC+ T +
Sbjct: 546 LRKSGNANADVGYEGATVLDPIKNYYEVPIATLDFASLYPSIMQAYNLCYSTLV------ 599
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
N V PD++ K E NG ++V V+KG+LP +LEE+LS R K+
Sbjct: 600 --NPADVGKLDPDIY----RKSE-----NGNVFVHSSVKKGILPTILEELLSARKRAKKD 648
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K AP+ + N RQLALK+ AN YG+T A G++PC +A S+ GR LEK
Sbjct: 649 MKN-APT-DFDRAVQNGRQLALKVSANSVYGFTGATV-GQLPCLPIASSVTSYGRQLLEK 705
Query: 1433 AISFVNENEK------WKAKVIYGDTDRYTV 1457
+FV E A+V+YGDTD V
Sbjct: 706 TKTFVEEKYTKSNGYDHDAQVVYGDTDSVMV 736
>gi|348559458|ref|XP_003465533.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cavia
porcellus]
Length = 1105
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 230/509 (45%), Gaps = 73/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 308 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 359
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I +V +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 360 PILGARVQSYEQEEDLLQAWSLFVRTVDPDVITGYNIQNFDLPYLISRAQTL------KV 413
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
PL ++ S I + + GR + + + GR+
Sbjct: 414 KGFPLLGRVVGLPSNIRDSSFQSRQM--------------------GRRDSKVVSMVGRV 453
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+++ +++ E KL YT+ AV+ L + + ++T +G + R R Y +
Sbjct: 454 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVYCLK 512
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR + L
Sbjct: 513 DAFLPLRLLERLMVLVNNVEMARVTGVPLSYLLSRGQQVKVVSQLLRQTMRERMLMPVVK 572
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 573 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR---P 622
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ + D+ + P G +V VRKG+LP++LE +LS R K+
Sbjct: 623 GAAQKLGLDA------------DQFIRTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 667
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 668 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 726
Query: 1431 EKAISFVN------ENEKWKAKVIYGDTD 1453
EK V AKV+YGDTD
Sbjct: 727 EKTKQLVESKYTVANGYSADAKVVYGDTD 755
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 79/200 (39%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYM--APPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ APP+PG N+VPV+R +G T G C
Sbjct: 86 DPQKEPLIF--QQLEIDHYVGSAPPLPGRTPPLH-------NQVPVLRAFGVTDEGVSVC 136
Query: 61 LHIHRALPYLYVPC---------ADIPVQL--------------------------RQED 85
HIH PY YVP AD+ +L R+
Sbjct: 137 CHIHGFAPYFYVPAPPGFGAEHLADLQRELSAAISRDQRGGKELAGPAVLAMELCSRESM 196
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L L + R+ + + V + S P+E+++ F ++
Sbjct: 197 FGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRV-----AGLGTPSFAPYEANVDFEIR 251
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 252 FMVDTDIVGCNWLELPAGKY 271
>gi|71412800|ref|XP_808567.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70872801|gb|EAN86716.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi]
Length = 1029
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 240/506 (47%), Gaps = 73/506 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVE-IYVLLYCKSESHQRSLV 1014
+LSI+++ + + L PDP D + +A + + N+++ I+ L C + R
Sbjct: 234 ILSIDIECQGKKGLFPDPEEDPVIQIANHCINYGNEAEPLTRTIFTLKSCGPIAGAR--- 290
Query: 1015 GIPDCKVFVCSKEIH--LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
VCS E + +++ + + DPDI G++I +L R A L N
Sbjct: 291 --------VCSYETEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNRGAALKT---N 339
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D +I+ER + + + G + L + G
Sbjct: 340 D--------AFHYWGRQINERTVP--------------REKKFQSKQMGNREYTELTLEG 377
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R++L+V +++ + KL Y++ AV++ L + + ++ G R R Y
Sbjct: 378 RVILDVMVVIQRDYKLRSYSLNAVSQHFLGEQKEDVHHSIIAD-LQQGSEETRRRLAVYC 436
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L ++++ +L ++ E+ARV G+ +L RG Q +V SM+LR A ++ L +
Sbjct: 437 LKDALLPVKLLERLMVVVNNVEMARVTGVPIEWLLERGQQIKVFSMMLRKAKAKDLLVPA 496
Query: 1253 -----PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
G Q + A V+EP GFY P+V LDF SLYPS++IA+NLC+ T +
Sbjct: 497 VEYSGGGGDQRGYEGAT-----VIEPLKGFYNCPIVTLDFASLYPSIIIAHNLCYSTLV- 550
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
RP ++R + L P G +V ++ G+LP +L+++L+ R
Sbjct: 551 ---------------RPS-DIVRYPAEMLSRTPTGDTFVKKELFPGILPEVLQDLLAARK 594
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K +K + P + + +++ N RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 595 RAKSLMKDV-PMESLEYKVLNGRQLALKISANSVYGFTGAQV-GKLPCLEVSSSVTAYGR 652
Query: 1428 STLEKAISFVNENEKWKAKVIYGDTD 1453
+++ F+ E+ KV+YGDTD
Sbjct: 653 LMIDQT-KFLVESLYPGVKVVYGDTD 677
>gi|407862999|gb|EKG07818.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi]
Length = 1029
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 240/506 (47%), Gaps = 73/506 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVE-IYVLLYCKSESHQRSLV 1014
+LSI+++ + + L PDP D + +A + + N+++ I+ L C + R
Sbjct: 234 ILSIDIECQGKKGLFPDPEEDPVIQIANHCINYGNEAEPLTRTIFTLKSCGPIAGAR--- 290
Query: 1015 GIPDCKVFVCSKEIH--LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
VCS E + +++ + + DPDI G++I +L R A L N
Sbjct: 291 --------VCSYETEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNRGAALKT---N 339
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D +I+ER + + + G + L + G
Sbjct: 340 D--------AFHYWGRQINERTVP--------------REKKFQSKQMGNREYTELTLEG 377
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R++L+V +++ + KL Y++ AV++ L + + ++ G R R Y
Sbjct: 378 RVILDVMVVIQRDYKLRSYSLNAVSQHFLGEQKEDVHHSIIAD-LQQGSEETRRRLAVYC 436
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L ++++ +L ++ E+ARV G+ +L RG Q +V SM+LR A ++ L +
Sbjct: 437 LKDALLPVKLLERLMVVVNNVEMARVTGVPIEWLLERGQQIKVFSMMLRKAKVKDLLVPA 496
Query: 1253 -----PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
G Q + A V+EP GFY P+V LDF SLYPS++IA+NLC+ T +
Sbjct: 497 VEYSGGGGDQRGYEGAT-----VIEPLKGFYNCPIVTLDFASLYPSIIIAHNLCYSTLV- 550
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
RP ++R + L P G +V ++ G+LP +L+++L+ R
Sbjct: 551 ---------------RPS-DIVRYPAEMLSRTPTGDTFVKKELFPGILPEVLQDLLAARK 594
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K +K + P + + +++ N RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 595 RAKSLMKDV-PMESLEYKVLNGRQLALKISANSVYGFTGAQV-GKLPCLEVSSSVTAYGR 652
Query: 1428 STLEKAISFVNENEKWKAKVIYGDTD 1453
+++ F+ E+ KV+YGDTD
Sbjct: 653 LMIDQT-KFLVESLYPGVKVVYGDTD 677
>gi|321264115|ref|XP_003196775.1| delta DNA polymerase [Cryptococcus gattii WM276]
gi|317463252|gb|ADV24988.1| Delta DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 1049
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 229/507 (45%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + + +H +VG
Sbjct: 255 LRVLSFDIECAGRKGIFPEANVDPVIQIAAMVTRHGESKPFIRNVFTLNTCAH---IVG- 310
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E L + K + + DPD+++G++I L +L +RA L I
Sbjct: 311 --SQVLEFKDERQLLLEWRKFVEAVDPDMIIGYNISNFDLPYLLDRAKALKI-------- 360
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+ + G N+ E + E+ + A +G+ + +++ GR+ L
Sbjct: 361 -----------PDFAFLGRLRNVRTE--IKETHFSSKA-----YGQRDSKAVNMEGRLQL 402
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ + KL YT+ AV L + + ++T+ +G +R R Y + A
Sbjct: 403 DILQVMQRDYKLRSYTLNAVCAQFLGEQKEDVHHSIITE-LQNGTADSRRRLAVYCLKDA 461
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +LSRG Q +V S L R A Y + P
Sbjct: 462 YLPQRLMDKLMCFVNYTEMARVTGVPFNYLLSRGQQIKVVSQLYRNAADAGY--VIPALK 519
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP GFY P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 520 SEGSDEQYEG-ATVIEPSKGFYDVPIATLDFASLYPSIMMAHNLCYTTLLDK---GTIER 575
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
L + + +H PN + K RKG+LP +LE +L+ R KQ +K
Sbjct: 576 LKLVEGQDYVHT-----------PNNDFFATSKRRKGLLPHILENLLAARKRAKQDLK-- 622
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ + RQLALK+ AN YG+T A G++PC ++ S+ GR +E
Sbjct: 623 VEKDPFKRAVLDGRQLALKVSANSVYGFTGATV-GKLPCLAISSSVTAYGRQMIELTKKE 681
Query: 1437 VNENEKWK------AKVIYGDTDRYTV 1457
V K AKV+YGDTD V
Sbjct: 682 VEAQYSMKNGYDHDAKVVYGDTDSVMV 708
>gi|58260420|ref|XP_567620.1| delta DNA polymerase [Cryptococcus neoformans var. neoformans JEC21]
gi|57229701|gb|AAW46103.1| delta DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1058
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 231/508 (45%), Gaps = 61/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + + +H +VG
Sbjct: 264 LRVLSFDIECAGRKGIFPEANVDPVIQIAAMVTRHGESKPFIRNVFTLNTCAH---IVG- 319
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E L + K + + DPD+++G++I L +L +RA L I
Sbjct: 320 --SQVLEFKDERQLLLEWRKFVDTVDPDMIIGYNISNFDLPYLLDRAKALKI-------- 369
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+ + G N+ E V E+ + A +G+ + +++ GR+ L
Sbjct: 370 -----------PDFAFLGRLRNVRTE--VKETHFSSKA-----YGQRDSKAVNMEGRLQL 411
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ + KL YT+ AV L + + ++T+ +G +R R Y + A
Sbjct: 412 DILQVMQRDYKLRSYTLNAVCAQFLGEQKEDVHHSIITE-LQNGTADSRRRLAVYCLKDA 470
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +LSRG Q +V S L R A Y + P
Sbjct: 471 YLPQRLMDKLMCFVNYTEMARVTGVPFNYLLSRGQQIKVISQLYRNAADAGY--VIPALK 528
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP GFY P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 529 SEGSDEQYEG-ATVIEPSKGFYDVPIATLDFASLYPSIMMAHNLCYTTLLDK-------- 579
Query: 1317 LGVSSFRPDLHVLRDLKDELLI-PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ L+ ++ E + PN + K RKG+LP +LE +L+ R KQ +K
Sbjct: 580 -------GTIERLKLVEGEDYVHTPNNDFFATSKRRKGLLPHILENLLAARKRAKQDLK- 631
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + RQLALK+ AN YG+T A G++PC ++ S+ GR +E
Sbjct: 632 -VEKDPFKRAVLDGRQLALKVSANSVYGFTGATV-GKLPCLAISSSVTAYGRQMIELTKK 689
Query: 1436 FVNENEKWK------AKVIYGDTDRYTV 1457
V K AK++YGDTD V
Sbjct: 690 EVEAEYSMKNGYDHDAKIVYGDTDSVMV 717
>gi|170104866|ref|XP_001883646.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641281|gb|EDR05542.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1064
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 235/513 (45%), Gaps = 71/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A +H I + S SH +VG
Sbjct: 268 LRILSFDIECAGRKGIFPEASVDPVIQIANMVTIQGEHKPFIRNVFTLNSCSH---IVGS 324
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLG------IGL 1070
+K +H + F++ DPD+++G++I G +L +RA + +G
Sbjct: 325 QVLSFDDEAKMLHSWRDFVE---QVDPDVVIGYNIAGFDFPYLMDRAKAIKAIKFPYLGK 381
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
L ++ K+ ++ S + +G+ + +
Sbjct: 382 LKNV-------KVETKNTHFSSKA-------------------------YGQRDSKDTPL 409
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ L+V + M+ E KL YT+ +V L + + V+T+ +G +R R
Sbjct: 410 DGRLQLDVLQFMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITE-LQNGTPESRRRLAV 468
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L ++++L E+ARV G+ F +LSRG +V S L R A+ + Y
Sbjct: 469 YCLKDAYLPQRLLDKLMCFVNYIEMARVTGVPFNYLLSRGQSIKVLSQLFRKANDEGY-- 526
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
+ P S E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 527 VVPSMKGEGSDEQYEG-ATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLDKAT 585
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
+ L +++D+ + + PN ++ K RKG+LP +LE+++S R K
Sbjct: 586 IDR------------LGLVKDV--DYIQTPNNDLFATTKKRKGLLPTILEDLISARKRAK 631
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+KK + + + RQLALK+ AN YG+T A G++PC ++ S+ GR +
Sbjct: 632 ADLKK--ETDPFKKAVLDGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTSYGRQMI 688
Query: 1431 EK------AISFVNENEKWKAKVIYGDTDRYTV 1457
EK A + A++IYGDTD V
Sbjct: 689 EKTKQEVEAEYCIANGHTHDAEIIYGDTDSVMV 721
>gi|398408323|ref|XP_003855627.1| DNA polymerase delta catalytic subunit [Zymoseptoria tritici IPO323]
gi|339475511|gb|EGP90603.1| hypothetical protein MYCGRDRAFT_35747 [Zymoseptoria tritici IPO323]
Length = 1107
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 150/513 (29%), Positives = 238/513 (46%), Gaps = 71/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+ D + NVV + + ++ + C S
Sbjct: 309 LRILSFDIECAGRKGVFPEANIDPVIQIANVVT-RYGEEKPFVRNVFCMDTC-------S 360
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
L I + +VF E + + L DPD+++G++ +L +RAAHL +G
Sbjct: 361 L--IVNTQVFEFHSEEKMLMAWRDFLEEVDPDVIIGYNTSNFDFPYLLDRAAHLKVGKFP 418
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+R K AA D+ S + + G + G
Sbjct: 419 YWTRLK-NVKSAARDANFSSK-------------------------QMGNRDTKATNTNG 452
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ +L++ + +L YT+ +V+ L+ + + ++T+ + P +R R Y
Sbjct: 453 RLQLDLLQLIQRDYQLRSYTLNSVSAHFLKEQKEDVHHTMITELYNGTP-ESRRRLAVYC 511
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q +
Sbjct: 512 LKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNMLLSRGQQVKFISQLFRKALEQQL--VV 569
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P S E V+EP G+Y PV LDF SLYPS+M A+NLC+ T L K
Sbjct: 570 PNLKPEGSDEQYEG-ATVIEPTRGYYDVPVATLDFASLYPSIMQAHNLCYTTLLNKNAVE 628
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
K L++ +D ++ ++ PNG ++ KVRKG+L ++LEE+L R K+A
Sbjct: 629 K------------LNLKKD--EDYIVTPNGDLFCTTKVRKGLLSQILEELLGAR---KRA 671
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K LA + + N RQLALK+ AN YG T A +G++PC +A S GR +E
Sbjct: 672 KKALAVETDPFKKAVLNGRQLALKISANSVYGLTGAT-NGKLPCLAIASSTTSYGRQMIE 730
Query: 1432 KAISFVNENE-------KWKAKVIYGDTDRYTV 1457
+ V EN A+VIYGDTD V
Sbjct: 731 RTKEEV-ENRYTIANGYSHDAQVIYGDTDSVMV 762
>gi|449451191|ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
sativus]
Length = 1086
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 147/510 (28%), Positives = 233/510 (45%), Gaps = 69/510 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
+LS +++ R P+P D + N+V L E D + L C
Sbjct: 297 ILSFDIECAGRKGHFPEPTQDPVIQVANLVTLQGE-DQPFVRNVMTLNTCSP-------- 347
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I V E + + ++ DPDI++G++I L +L ERA L I +
Sbjct: 348 -IAGVDVLSFDTERDVLLAWRDLIREVDPDIIIGYNICKFDLPYLIERAEALKIPEFPLL 406
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R SK+ D+ S R + G + + V GR+
Sbjct: 407 GRIR-NSKVRVKDTTFSSR-------------------------QLGTRESKEITVEGRV 440
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
++ ++M+ + KL+ Y++ +V+ L + + +++ +G R R Y +
Sbjct: 441 QFDLLQVMQRDYKLSSYSLNSVSSHFLSEQKEDVHHSIISD-LQNGNAETRRRLAVYCLK 499
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
A L ++++L I E+ARV G+ +LSRG +V S LLR A +N L I
Sbjct: 500 DAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN-LVIPNA 558
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
H + Q E V+E +GFY P+ LDF SLYPS+M+AYNLC+CT + P
Sbjct: 559 KHAGSDQGTYEG-ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTL---VTPEDA 614
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
L + P H + P+G ++V P ++KG+LP +LEE+L+ R K +K
Sbjct: 615 CKLNL----PPEHFNK--------TPSGEIFVKPNLQKGILPEILEELLTARKRAKADLK 662
Query: 1375 KLA-PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
+ P ++ + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 663 EAKDPFEKA---VLDGRQLALKISANSVYGFTGATV-GQLPCLEISSSVTSYGRQMIEHT 718
Query: 1434 ISFVNEN------EKWKAKVIYGDTDRYTV 1457
V + K A+VIYGDTD V
Sbjct: 719 KKLVEDKFTTLGGYKHNAEVIYGDTDSVMV 748
>gi|70943300|ref|XP_741713.1| DNA polymerase delta catalytic subunit [Plasmodium chabaudi chabaudi]
gi|56520266|emb|CAH84358.1| DNA polymerase delta catalytic subunit, putative [Plasmodium chabaudi
chabaudi]
Length = 694
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 181/357 (50%), Gaps = 30/357 (8%)
Query: 1110 LAKDAIIEDEWGRTHASG-LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSI 1168
+ KDA + TH + +++ GRI +V+ L++ + +L YT+ V+ L+ + +
Sbjct: 24 IVKDANFSSKQFGTHETKEININGRIQFDVYDLIKRDYRLKSYTLNYVSFEFLKEQKEDV 83
Query: 1169 PFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLS 1228
+ ++ + +R R Y + L L ++++L I E+ARV G F +L+
Sbjct: 84 HYSIMND-LQNENSESRKRIATYCIKDGLLPLRLIDKLLFIYNYVEMARVTGTPFVYLLT 142
Query: 1229 RGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQ 1288
RG Q +V S L R NY+ I +V S E V+EP G+Y +P+ LDF
Sbjct: 143 RGQQIKVTSQLYRKCKELNYI-IPSTYMKVNSNDKFEG-ATVLEPIKGYYIEPISTLDFA 200
Query: 1289 SLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP--NGVMYV 1346
SLYPS+MIA+NLC+ T + +N +S DL+ K+++ P N +V
Sbjct: 201 SLYPSIMIAHNLCYSTLI-------KNNDEIS----DLN-----KNDITTVPGKNNFKFV 244
Query: 1347 PPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTA 1406
V++GVLP ++EE++ R VK +K I + N RQLALK+ AN YGYT
Sbjct: 245 KGNVKRGVLPLIVEELIKARKNVKAMMKN--EQNPITKMVLNGRQLALKISANSVYGYTG 302
Query: 1407 AGFSGRMPCAELADSIVQCGRSTLEKAISFV------NENEKWKAKVIYGDTDRYTV 1457
A G++PC E+A SI GRS +EK V + A V+YGDTD V
Sbjct: 303 AAAGGQLPCLEIATSITTFGRSMIEKTKETVEAYYCKKNGFEHNATVVYGDTDSVMV 359
>gi|119175148|ref|XP_001239851.1| hypothetical protein CIMG_09472 [Coccidioides immitis RS]
gi|392870043|gb|EAS28595.2| DNA polymerase (pol2) [Coccidioides immitis RS]
Length = 1110
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 146/515 (28%), Positives = 240/515 (46%), Gaps = 75/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y +S+ R++ +
Sbjct: 312 LRILSFDIECAGRKGIFPEAHEDPVIQIANV------------VTRYGESKPFVRNVFVL 359
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V ++ E + + + L DPD+++G++I +L +RA HL
Sbjct: 360 NGCSLIVNTQILDFKTEQEMLMAWREFLEKVDPDVIIGYNIANFDFPYLLDRARHL---- 415
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDA-IIEDEWGRTHASGLH 1129
+ P S++ + VV++S KD + G +
Sbjct: 416 --NCDDFPYWSRL------------------KNVVSQS---KDTNFSSKQMGNRDTKATN 452
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
GRI L++ +L++ + +L YT+ +V L + + ++T+ + P +R R
Sbjct: 453 TNGRIQLDLLQLIQRDHQLRNYTLNSVCSHFLGEQKEDVHHTMITELYNGTPD-SRRRLA 511
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q+ +
Sbjct: 512 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQDLV 571
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ N Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L K
Sbjct: 572 IPNLKNENGEEQYKGAT---VIEPVKDYYDVPIATLDFASLYPSIIQAHNLCYTTLLNKT 628
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K L++ +D ++ ++ PNG M+ KVRKG+L ++L+E+LS R
Sbjct: 629 SVEK------------LNLKKD--EDYIVTPNGDMFCTSKVRKGLLSQILQELLSAR--- 671
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A K+LA + + N RQLALK+ AN YG T A +G++PC +A S GR
Sbjct: 672 KRAKKELAVETDPFKKAVLNGRQLALKISANSVYGITGAS-NGKLPCLAIASSTTSYGRQ 730
Query: 1429 TLEKA-----ISFVNEN-EKWKAKVIYGDTDRYTV 1457
+ K F N + AKVIYGDTD V
Sbjct: 731 MIMKTKDEVEARFTMANGYPYDAKVIYGDTDSVMV 765
>gi|71406868|ref|XP_805939.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70869536|gb|EAN84088.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi]
Length = 833
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 239/506 (47%), Gaps = 73/506 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVE-IYVLLYCKSESHQRSLV 1014
+LSI+++ + + L PDP D + +A + + N+++ I+ L C
Sbjct: 234 ILSIDIECQGKKGLFPDPEDDPVIQIANHCINYGNEAEPLTRTIFTLKSCG--------- 284
Query: 1015 GIPDCKVFVCSKEIH--LFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
P VCS E + +++ + + DPDI G++I +L R A L N
Sbjct: 285 --PIAGARVCSYETEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNRGAALKT---N 339
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
D +I+ER + + + G + L + G
Sbjct: 340 D--------AFHYWGRQINERTVPR--------------EKKFQSKQMGNREYTELTLEG 377
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R++L+V +++ + KL Y++ AV++ L + + ++ G R R Y
Sbjct: 378 RVILDVMVVIQRDYKLRSYSLNAVSQHFLGEQKEDVHHSIIAD-LQQGSEETRRRLAVYC 436
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L ++++ +L ++ E+ARV G+ +L RG Q +V SM+LR A ++ L +
Sbjct: 437 LKDALLPVKLLERLMVVVNNVEMARVTGVPIEWLLERGQQIKVFSMMLRKAKAKDLLVPA 496
Query: 1253 -----PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
G Q + A V+EP GFY P+V LDF SLYPS++IA+NLC+ T +
Sbjct: 497 VEYSGGGGDQRGYEGAT-----VIEPLKGFYNCPIVTLDFASLYPSIIIAHNLCYSTLV- 550
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
RP ++R + L P G +V ++ G+LP +L+++L+ R
Sbjct: 551 ---------------RPS-DIVRYPAEMLSRTPTGDTFVKKELFPGILPEVLQDLLAARK 594
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K +K + P + + +++ N RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 595 RAKSLMKDV-PMESLEYKVLNGRQLALKISANSVYGFTGAQV-GKLPCLEVSSSVTAYGR 652
Query: 1428 STLEKAISFVNENEKWKAKVIYGDTD 1453
+++ F+ E+ KV+YGDTD
Sbjct: 653 LMIDQT-KFLVESLYPGVKVVYGDTD 677
>gi|393222031|gb|EJD07515.1| hypothetical protein FOMMEDRAFT_164466 [Fomitiporia mediterranea
MF3/22]
Length = 1062
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 234/508 (46%), Gaps = 61/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ + D + +A + I + + SH +VG
Sbjct: 266 LRILSFDIECAGRKGIFPEAQIDPVIQIANMVTRQGESKPFIRNVFTLNTCSH---IVG- 321
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E+ + + + DPDI++G++I L +L +RA + + R
Sbjct: 322 --SQVLSYKSELEMLEAWRDFVEQVDPDIVIGYNIANFDLPYLLDRATAIKSKKFMYLGR 379
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+G+ + VV ++ + A +G+ + + GR+ L
Sbjct: 380 M---------------KGV------KTVVKDTHFSSKA-----FGQRDSKETDMDGRLQL 413
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ + M E KL YT+ AV L + + V+T+ +G +R R Y + A
Sbjct: 414 DLLQFMHREHKLRSYTLNAVCARFLGEQKEDVHHSVITE-LQNGTAESRRRLAVYCLKDA 472
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L E+ARV G+ F +L RG +V S LLR A+ + Y I+P
Sbjct: 473 YLPQRLMDKLMCFVNYIEMARVTGVPFHFLLQRGQSIKVLSQLLRRANDEGY--ITPTLK 530
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+ E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T L K + N
Sbjct: 531 GGGTDEQYEG-ATVIEPKKGYYDAPIATLDFSSLYPSIMMAHNLCYTTLLDKHTIDRLNL 589
Query: 1317 L-GVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ GV + + PN +V + RKG+LP +LE++++ R K +KK
Sbjct: 590 VKGV---------------DYIQTPNNDFFVTKEKRKGLLPSVLEDLIAARKRAKADLKK 634
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK--- 1432
+ + + RQLALK+ AN YG+T A G++PC ++ S+ GR +EK
Sbjct: 635 --ETDPFRRAVLDGRQLALKISANSVYGFTGATI-GKLPCLPISSSVTAYGRQMIEKTKQ 691
Query: 1433 ---AISFVNENEKWKAKVIYGDTDRYTV 1457
A + + A+VIYGDTD V
Sbjct: 692 EVEAEYCIANGREHNAEVIYGDTDSVMV 719
>gi|336259478|ref|XP_003344540.1| hypothetical protein SMAC_07548 [Sordaria macrospora k-hell]
gi|380093254|emb|CCC08912.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1071
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 178/347 (51%), Gaps = 31/347 (8%)
Query: 1119 EWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA 1178
+ G + GR+ L++ +L++ + +L YT+ AV L + + ++T+ F
Sbjct: 402 QMGNRDTKATNTNGRLQLDMLQLVQRDYQLRSYTLNAVCSNFLGEQKEDVHHSMITELFE 461
Query: 1179 SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
P +R R Y + A L +M++L + +E+ARV G+ F +L+RG Q + S
Sbjct: 462 GTP-ESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFNFLLARGQQVKFLSQ 520
Query: 1239 LLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAY 1298
L R A Q + P +S+ E V+EP G+Y P+ LDF SLYPS+M A+
Sbjct: 521 LFRKALEQKL--VIPNLRPESSEEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIMQAH 577
Query: 1299 NLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPR 1357
NLC+ T + K D+ KDE ++ PNG M+V K RKG+L +
Sbjct: 578 NLCYTTLIKK---------------RDIERWNLKKDEDYIVTPNGDMFVTTKQRKGLLAQ 622
Query: 1358 LLEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCA 1416
+LEE+LS R KQA ++LA + + + N RQLALK+ AN YG T A +G++PC
Sbjct: 623 ILEELLSAR---KQAKRELAVEKDPFKKAVLNGRQLALKVSANSVYGLTGAT-NGKLPCL 678
Query: 1417 ELADSIVQCGRSTLEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
E+A S+ GR +E+ V E A+VIYGDTD V
Sbjct: 679 EIASSVTSFGRQMIERTKKEVEERYTIANGYSHDAQVIYGDTDSVMV 725
>gi|322703524|gb|EFY95132.1| DNA polymerase delta catalytic subunit [Metarhizium anisopliae ARSEF
23]
Length = 1104
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 234/508 (46%), Gaps = 60/508 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + + S I
Sbjct: 304 LRILSFDIECAGRKGIFPEANQDPVIQIANVVTKYGEKKPFIRNVFCLDTTS------SI 357
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ KE + S + + L DPDI++G++I +L ERA HL + SR
Sbjct: 358 VATQILEYQKEERMLSEWQQFLIRADPDIIIGYNIANFDFPYLLERAKHLKVSGFEYWSR 417
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P + S + E + + G + GR+ L
Sbjct: 418 LP------SVPSRVKETNFSSKQI--------------------GNRDTKATNTNGRLQL 451
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + L YT+ +V L + + ++T+ F P +R R Y + A
Sbjct: 452 DLLQLIQRDHHLRSYTLNSVCAHFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKDA 510
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + P
Sbjct: 511 YLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFVSQLFRKALEQKL--VIPNIR 568
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
AS E V+EP G+Y P+ LDF SLYPS++ A+NLC+ T + K+
Sbjct: 569 SDASDEQYEG-ATVIEPVRGYYDVPIATLDFASLYPSIIQAHNLCYTTLV------KDKK 621
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
L + F +++D ++ ++ PNG +V K RKG+L ++LEE+L+ R KQA ++L
Sbjct: 622 L-IEKF----GLVKD--EDYIVTPNGDTFVTTKQRKGLLAQILEELLTAR---KQAKREL 671
Query: 1377 APSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
A + + N RQLALK+ AN YG T A +G++PC E+A S GR +E+
Sbjct: 672 AQETDPFKKAVLNGRQLALKISANSVYGLTGAT-TGKLPCLEIASSTTSFGRQMIERTKD 730
Query: 1436 FVNENEKWK------AKVIYGDTDRYTV 1457
V + A+VIYGDTD V
Sbjct: 731 EVEKKYNIANGYTHDAQVIYGDTDSVMV 758
>gi|340052318|emb|CCC46594.1| putative DNA polymerase delta catalytic subunit [Trypanosoma vivax
Y486]
Length = 1026
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 231/495 (46%), Gaps = 53/495 (10%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LSI+++ + R L P+ D + +A + ++ E L K+ S I
Sbjct: 233 ILSIDIECQGRKGLFPEAEKDPVIQIA---NHCINYGAETTPL--TKTVFTLNSCAAIAG 287
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
V E + + + L DPDIL G++I +L +R + L I ND+
Sbjct: 288 ATVCAYETEEEMLLAWAQFLKEVDPDILTGYNICNFDFPYLLDRGSALAI---NDVYHY- 343
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
+I+ER + + + G + L + GR+V++V
Sbjct: 344 -------WGRQINER--------------TTQREKKFQSKQMGNREYTELTMEGRVVMDV 382
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
+++ + KL Y++ AV++ L + + + + G R R Y + A L
Sbjct: 383 MVVIQRDYKLRSYSLNAVSQQFLGEQKEDVHHSNIAE-LQQGNHETRRRLAVYCLKDAYL 441
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
++++ +L ++ E+ARV G+ +L RG Q +V SMLLR A ++ L I +
Sbjct: 442 PVKLLERLMIVVNHVEMARVTGVPIGWLLERGQQIKVFSMLLRKARLRD-LLIPTLEYSG 500
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLG 1318
Q E V+EP G Y PVV LDF SLYPS++IA+NLC+
Sbjct: 501 GDQRGFEG-ATVIEPTKGLYMTPVVTLDFASLYPSIIIAHNLCY---------------- 543
Query: 1319 VSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP 1378
S+ D + R KD L P G +V V GVLP +L+++L R ++ + + P
Sbjct: 544 -STLVQDCNAERYPKDGLNHTPTGHYFVSRDVYPGVLPEVLQDLLLARKNARELMASV-P 601
Query: 1379 SQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN 1438
+ +++ N RQLALK+ AN YG+T A GR+PC EL+ S+ GR ++ A S V
Sbjct: 602 KDSLEYKVLNGRQLALKVSANSVYGFTGAQV-GRLPCLELSASVTGFGRLMIDSAKSHV- 659
Query: 1439 ENEKWKAKVIYGDTD 1453
E+ + KVIYGDTD
Sbjct: 660 ESLDPRVKVIYGDTD 674
>gi|303314745|ref|XP_003067381.1| DNA polymerase delta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240107049|gb|EER25236.1| DNA polymerase delta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1110
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 237/516 (45%), Gaps = 77/516 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y +S+ R++ +
Sbjct: 312 LRILSFDIECAGRKGIFPEAHEDPVIQIANV------------VTRYGESKPFVRNVFVL 359
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V ++ E + + L DPD+++G++I +L +RA HL
Sbjct: 360 NGCSLIVNTQILDFKTEQEMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDRARHL---- 415
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDA-IIEDEWGRTHASGLH 1129
+ P S++ + VV++S KD + G +
Sbjct: 416 --NCDDFPYWSRL------------------KNVVSQS---KDTNFSSKQMGNRDTKATN 452
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
GRI L++ +L++ + +L YT+ +V L + + ++T+ + P +R R
Sbjct: 453 TNGRIQLDLLQLIQRDHQLRNYTLNSVCSHFLGEQKEDVHHTMITELYNGTPD-SRRRLA 511
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q+ +
Sbjct: 512 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQDLV 571
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ N Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L K
Sbjct: 572 IPNLKNENGEEQYKGAT---VIEPVKDYYDVPIATLDFASLYPSIIQAHNLCYTTLLNKT 628
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
K L+ KDE ++ PNG M+ KVRKG+L ++L+E+LS R
Sbjct: 629 SVEK---------------LKLKKDEDYIVTPNGDMFCTSKVRKGLLSQILQELLSAR-- 671
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A K+LA + + N RQLALK+ AN YG T A +G++PC +A S GR
Sbjct: 672 -KRAKKELAVETDPFKKAVLNGRQLALKISANSVYGITGAS-NGKLPCLAIASSTTSYGR 729
Query: 1428 STLEKA-----ISFVNEN-EKWKAKVIYGDTDRYTV 1457
+ K F N + AKVIYGDTD V
Sbjct: 730 QMIMKTKDEVEARFTMANGYPYDAKVIYGDTDSVMV 765
>gi|320586772|gb|EFW99435.1| DNA polymerase delta catalytic subunit [Grosmannia clavigera kw1407]
Length = 1105
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/508 (27%), Positives = 236/508 (46%), Gaps = 61/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D + +A + + + +C ++ I
Sbjct: 306 LRILSFDIECAGRKGIFPEAEHDPVIQIANVVTRYGEKKPFVRNV-FCLDKTS-----SI 359
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ +E + + + L DPDI+ G++I +L +RA HL +G +R
Sbjct: 360 VATEILEFEREEKMLTDWRNFLLRIDPDIITGYNISNFDFPYLLDRAKHLKVGGFEYWTR 419
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P + + D+ +S + + G ++ GR+ L
Sbjct: 420 IP-SMRSQSKDTNLSSK-------------------------QMGSRDTKATNINGRLQL 453
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + L YT+ +V L + + ++T+ F P R R Y + A
Sbjct: 454 DLLQLIQRDHHLRSYTLNSVCSHFLGEQKEDVHHTMITELFNGTP-ENRRRLALYCLKDA 512
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + P
Sbjct: 513 YLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQVKFISQLFRKAMDQKL--VVPNVQ 570
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S+ E V+EP GFY PV LDF SLYPS+M A+NLC+ T + N
Sbjct: 571 PKGSEEQYEG-ATVIEPVRGFYKVPVATLDFASLYPSIMQAHNLCYTTLV--------NN 621
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ +F + +D+ + ++ PN +V K RKG+L ++LEE+L+ R KQA ++L
Sbjct: 622 AAIEAF----GLKKDV--DYIVTPNKDKFVTTKQRKGLLAQILEELLAAR---KQARREL 672
Query: 1377 APSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
A + + N RQLALK+ AN YG T A +G++PC E+A S GR +E+ +
Sbjct: 673 AMETDPFKKAVLNGRQLALKISANSVYGLTGAT-NGKLPCLEIARSTTSYGRQMIEQTRN 731
Query: 1436 FVNEN------EKWKAKVIYGDTDRYTV 1457
V + A+VIYGDTD V
Sbjct: 732 EVEQRYSVANGYSHNAQVIYGDTDSVMV 759
>gi|322693697|gb|EFY85548.1| DNA polymerase delta catalytic subunit [Metarhizium acridum CQMa 102]
Length = 1104
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 234/508 (46%), Gaps = 60/508 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + + S I
Sbjct: 304 LRILSFDIECAGRKGIFPEANQDPVIQIANVVTKYGEKKPFIRNVFCLDTTS------SI 357
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ KE + S + + L DPDI++G++I +L ERA HL + SR
Sbjct: 358 VATQILEYKKEDKMLSEWQQFLIRADPDIIIGYNIANFDFPYLLERAKHLKVSGFEYWSR 417
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P + S + E + + G + GR+ L
Sbjct: 418 LP------SVPSRVKETNFSSKQI--------------------GNRDTKATNTNGRLQL 451
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + L YT+ +V L + + ++T+ F P +R R Y + A
Sbjct: 452 DLLQLIQRDHHLRSYTLNSVCAHFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKDA 510
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + P
Sbjct: 511 YLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFVSQLFRKALEQKL--VIPNIR 568
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
AS E V+EP G+Y P+ LDF SLYPS++ A+NLC+ T + K+
Sbjct: 569 SDASDEQYEG-ATVIEPVRGYYDVPIATLDFASLYPSIIQAHNLCYTTLV------KDKK 621
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
L + F +++D ++ ++ PNG +V K RKG+L ++LEE+L+ R KQA ++L
Sbjct: 622 L-IEKF----GLVKD--EDYIVTPNGDTFVTTKQRKGLLAQILEELLTAR---KQAKREL 671
Query: 1377 APSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
A + + N RQLALK+ AN YG T A +G++PC E+A S GR +E+
Sbjct: 672 AQETDPFKKAVLNGRQLALKISANSVYGLTGAT-TGKLPCLEIASSTTSFGRQMIERTKD 730
Query: 1436 FVNENEKWK------AKVIYGDTDRYTV 1457
V + A+VIYGDTD V
Sbjct: 731 EVEKKYNIANGYTHDAQVIYGDTDSVMV 758
>gi|330921129|ref|XP_003299297.1| hypothetical protein PTT_10256 [Pyrenophora teres f. teres 0-1]
gi|311327099|gb|EFQ92613.1| hypothetical protein PTT_10256 [Pyrenophora teres f. teres 0-1]
Length = 1115
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 244/531 (45%), Gaps = 68/531 (12%)
Query: 941 SQIGFQD-PASAGAGEQ-----LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDH 994
+Q+ ++D A + GE L +LS +++ R + P+ D + +A +
Sbjct: 287 AQVHYEDLIAHSSEGEWAKLAPLRILSFDIECAGRKGIFPEANVDPVIQIANVVTRYGEQ 346
Query: 995 AVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGG 1054
+ + +C ++ I ++F E + + + DPD+++G++I
Sbjct: 347 KPFVRNV-FCLD-----TVSSIASTEIFSFQNEGEMLMKWRDFVEQVDPDVIIGYNINNF 400
Query: 1055 SLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDA 1114
+L +RA HL + R P +++ S++ + L
Sbjct: 401 DFPYLLDRAKHL------KLQRFPYWTRLKTVQSKVESSHFSSKQL-------------- 440
Query: 1115 IIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLT 1174
G + GR+ L++ +L++ + L YT+ +V L+ + + ++T
Sbjct: 441 ------GNRDTKTTNTNGRLQLDLLQLIQRDHHLRSYTLNSVCAHFLKEQKEDVHHSMIT 494
Query: 1175 KWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYR 1234
+ F +G +R R Y + A L ++++L + +E+ARV G+ F +LSRG Q R
Sbjct: 495 ELF-NGDSNSRRRLAVYCLKDAYLPQRLLDKLMCLVNYTEMARVTGVPFNYILSRGQQIR 553
Query: 1235 VESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSM 1294
S L R A + L + +Q S E V+EP+ G+Y DPV LDF SLYPS+
Sbjct: 554 FISQLFRKA-LDHQLIVPDLPNQGDSSDQYEG-ATVIEPKRGYYRDPVATLDFASLYPSI 611
Query: 1295 MIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKG 1353
M A+NLC+ T L K K L+ KDE ++ P+G M+ K RKG
Sbjct: 612 MQAHNLCYTTWLDKQTVEK---------------LKMKKDEDYIVTPHGDMFCTAKTRKG 656
Query: 1354 VLPRLLEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGR 1412
+L +LEE+LS R K+A ++LA + + N RQLALK+ AN YG T A +G+
Sbjct: 657 LLTEILEEVLSAR---KKAKRELATETDPFKKAVLNGRQLALKVTANSVYGLTGAT-NGK 712
Query: 1413 MPCAELADSIVQCGRSTLEKAISFVNENEKWK------AKVIYGDTDRYTV 1457
+PC +A S GR +E+ + V A+VIYGDTD V
Sbjct: 713 LPCLAIASSTTSFGRQMIERTKAEVEAKYNIANGYTHDAEVIYGDTDSVMV 763
>gi|320037710|gb|EFW19647.1| DNA polymerase delta catalytic subunit [Coccidioides posadasii str.
Silveira]
Length = 1110
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 237/516 (45%), Gaps = 77/516 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y +S+ R++ +
Sbjct: 312 LRILSFDIECAGRKGIFPEAHEDPVIQIANV------------VTRYGESKPFVRNVFVL 359
Query: 1017 PDCKVFVCSK------EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C + V ++ E + + L DPD+++G++I +L +RA HL
Sbjct: 360 NGCSLIVNTQILDFKTEQEMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDRARHL---- 415
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDA-IIEDEWGRTHASGLH 1129
+ P S++ + VV++S KD + G +
Sbjct: 416 --NCDDFPYWSRL------------------KNVVSQS---KDTNFSSKQMGNRDTKATN 452
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
GRI L++ +L++ + +L YT+ +V L + + ++T+ + P +R R
Sbjct: 453 TNGRIQLDLLQLIQRDHQLRNYTLNSVCSHFLGEQKEDVHHTMITELYNGTPD-SRRRLA 511
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q+ +
Sbjct: 512 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQDLV 571
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ N Q V+EP +Y P+ LDF SLYPS++ A+NLC+ T L K
Sbjct: 572 IPNLKNENGEEQYKGAT---VIEPVKDYYDVPIATLDFASLYPSIIQAHNLCYTTLLNKT 628
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
K L+ KDE ++ PNG M+ KVRKG+L ++L+E+LS R
Sbjct: 629 SVEK---------------LKLKKDEDYIVTPNGDMFCTSKVRKGLLSQILQELLSAR-- 671
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A K+LA + + N RQLALK+ AN YG T A +G++PC +A S GR
Sbjct: 672 -KRAKKELAVETDPFKKAVLNGRQLALKISANSVYGITGAS-NGKLPCLAIASSTTSYGR 729
Query: 1428 STLEKA-----ISFVNEN-EKWKAKVIYGDTDRYTV 1457
+ K F N + AKVIYGDTD V
Sbjct: 730 QMIMKTKDEVEARFTMANGYPYDAKVIYGDTDSVMV 765
>gi|426196824|gb|EKV46752.1| hypothetical protein AGABI2DRAFT_186127 [Agaricus bisporus var.
bisporus H97]
Length = 1071
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 231/508 (45%), Gaps = 60/508 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAVEIYVLLYCKSESHQRSLVG 1015
L +LS +++ R + P+ + D I + + + D + ++ + +
Sbjct: 274 LRILSFDIECAGRKGIFPEAQTDPVIQIANMVTRHGEDKP-------FIRNVFNLNTCAN 326
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I +V ++E LF + + DPD++ G++I +L +RA L + N +
Sbjct: 327 IVGSQVLTFTEEASLFQAWRDFVEEVDPDVITGYNIANFDFPYLMDRAKALEVANFNYLG 386
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R + ++ S R +G+ + + GR+
Sbjct: 387 RLR-NVRTEVKNTHFSSRA-------------------------YGQRDSKETPLYGRLQ 420
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
+++ + M+ E KL YT+ +V L + + V+T+ + P +R R Y +
Sbjct: 421 MDILQFMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITELYNGTP-ESRRRLAVYCLKD 479
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L ++++L +E+ARV G+ F +LSRG +V S L R A+ + Y+ I
Sbjct: 480 AYLPQRLLDKLMCFVNYTEMARVTGVPFNYLLSRGQSIKVLSQLFRKANEEGYV-IPALK 538
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ A E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T + + K
Sbjct: 539 GEGTDGEAYEG-ATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLIDGNMIEK-- 595
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
L +++D+ + + PN +V RKG+LP +LE+++S R K +K
Sbjct: 596 ----------LDLVKDV--DYIQTPNNDFFVTSMKRKGLLPTILEDLISARKRAKADLK- 642
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + RQLALK+ AN YG+T A G++PC ++ S+ GR +EK
Sbjct: 643 -MEKDPFKKAVLDGRQLALKISANSVYGFTGATV-GKLPCLPISSSVTAYGRQMIEKTKQ 700
Query: 1436 FVN------ENEKWKAKVIYGDTDRYTV 1457
V ++ A+VIYGDTD V
Sbjct: 701 EVEAEFCIANGHQYDARVIYGDTDSVMV 728
>gi|324500650|gb|ADY40299.1| DNA polymerase delta catalytic subunit [Ascaris suum]
Length = 1091
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 235/512 (45%), Gaps = 67/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ +R + P+ D++ +A + E +D + C ++
Sbjct: 293 LRILSFDIECTNRRGIFPEAHTDAVIQIANMVKVEGGTDPFIR-----NCFVIGDTTPVI 347
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G + VC E L + + + DPDI+ G++IQ + ++ +RA L I
Sbjct: 348 G---SDIIVCRNEHELLEKWAEFVRILDPDIVTGYNIQNFDIPYIIDRAKALKI------ 398
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
ESK+A ML + S + + + G + GR+
Sbjct: 399 -----ESKVA--------------MLGRVPSSLSKVRDMPVSSKQMGNRTNKYTSMEGRV 439
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+ +V +++ + KL Y++ +V+ L + + + ++ +G R R Y +
Sbjct: 440 IFDVMQVVLRDYKLRSYSLNSVSYHFLGEQKEDVDYSLIAD-LQNGTPLTRRRLAVYCMK 498
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
A L L ++ +L + E+ARV G+ +LSRG Q +V S LLR A + ++ P
Sbjct: 499 DAYLPLRLLQKLMSVINYIEMARVTGVPLDYLLSRGQQVKVMSQLLRKAKSHHFFV--PV 556
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ E V+EP GFYA P+ LDF SLYPS+MIA+N+C+ T +
Sbjct: 557 MDAAQTDDTFEG-ATVIEPIRGFYAVPIATLDFASLYPSVMIAHNICYTTLIQG------ 609
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
+P L++ D+ + P+ +V VR+G+LP +LE++LS R K +K
Sbjct: 610 --------QPSAQGLKE--DDFEVSPSNNRFVKANVRRGLLPEILEDLLSARKRAKADLK 659
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
+ + + N RQLALK+ AN YG+T A G++PC +++ S+ GR ++
Sbjct: 660 NEKDPFRCM--VLNGRQLALKISANSVYGFTGATV-GKLPCLQISQSVTAFGRQMIDFTK 716
Query: 1435 SFVNENEK---------WKAKVIYGDTDRYTV 1457
+ V E K AKVIYGDTD V
Sbjct: 717 NTVEEIYKKGYLNGKCPCDAKVIYGDTDSVMV 748
>gi|392565561|gb|EIW58738.1| delta DNA polymerase [Trametes versicolor FP-101664 SS1]
Length = 1066
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 227/507 (44%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ + D + +A + I + + +H +VG
Sbjct: 270 LRILSFDIECAGRKGIFPEAQVDPVIQIANMVTRQGESKPFIRNVFTLNTCAH---IVG- 325
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E L + + + DPD+++G++I G L +L +RA L + R
Sbjct: 326 --SQVISFQNEAELLLKWREFVEEVDPDVVIGYNISGFDLPYLIDRAKALKAQKFPYLGR 383
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+ D+ S + +G+ + + GR+ +
Sbjct: 384 MT-NKQTVTKDTHFSSKA-------------------------FGQRDSKETALDGRLQI 417
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ + M+ E KL YT+ +V L + + V+T +G +R R Y + A
Sbjct: 418 DILQYMQREYKLRSYTLNSVCAQFLGEQKEDVHHSVITD-LQNGTPESRRRLAVYCLKDA 476
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L +E+ARV G+ F +LSRG +V S L R A+ Y I P
Sbjct: 477 YLPQRLMDKLMCFINYTEMARVTGVPFNFLLSRGQSIKVLSQLFRKANDDGY--IVPALR 534
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 535 GEGSDEQYEG-ATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLDK-------- 585
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
S L +++D+ + + PN ++V RKG+LP +LEE++ R K +KK
Sbjct: 586 ----STVERLKLVKDV--DYIQTPNNDLFVKSTRRKGLLPTILEELIGARKRAKADLKK- 638
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK---- 1432
+ + + RQLALK+ AN YG+T A G++PC ++ S GR +EK
Sbjct: 639 -ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLPISSSTTSYGRQMIEKTKQE 696
Query: 1433 --AISFVNENEKWKAKVIYGDTDRYTV 1457
A + A VIYGDTD V
Sbjct: 697 VEAEYCIANGHSHDATVIYGDTDSVMV 723
>gi|170574522|ref|XP_001892851.1| DNA polymerase delta catalytic subunit [Brugia malayi]
gi|158601393|gb|EDP38315.1| DNA polymerase delta catalytic subunit, putative [Brugia malayi]
Length = 1084
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 240/515 (46%), Gaps = 73/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ +R + P+ D++ N+V + EN+ + C
Sbjct: 286 LRILSFDIECTNRQGIFPEAHTDAVIQIANMVKIEGENEP-------FIRNCFVIGETAP 338
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
++G ++ V E L + + + + + DPD++ G++IQ ++ ERA L I
Sbjct: 339 VIG---SEIIVSKSEEELLNKWAEFVRTVDPDLITGYNIQNFDFPYIVERARALKIE--- 392
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
SR + +I S++ E ++ + G +V G
Sbjct: 393 --SRATMLGRIPNSLSKVREMPLSSKQM--------------------GNRTNKITNVEG 430
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+V +V +++ + KL Y++ +V+ L + + + ++ +G R R Y
Sbjct: 431 RVVFDVIQVVLRDYKLRSYSLNSVSYHFLCEQKEDVDYSMIAD-LQNGNAFTRRRLAIYC 489
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L+++ +L I E+ARV G+ +LSRG Q +V S +LR A + ++
Sbjct: 490 MKDAYLPLKLLQKLMSIINYIEMARVTGVPLDYLLSRGQQVKVMSQILRKAKSLHFFL-- 547
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P V + E V++P GFY P+ LDF SLYPS+MIA+NLC+ T + S
Sbjct: 548 PVIDIVQADDTYEG-ATVIDPIRGFYNTPIATLDFASLYPSIMIAHNLCYTTLIRGSNAS 606
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
H L D ++ + P+ +V +R+G+LP++LE++L+ R KQA
Sbjct: 607 --------------HNLSD--SDVEVTPSNNRFVKSNIRRGLLPQVLEDLLNAR---KQA 647
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
L Q R + N RQLALK+ AN YG+T A G++PC E++ S+ GR ++
Sbjct: 648 KNDLKNEQDPFRRMVLNGRQLALKISANSVYGFTGASV-GKLPCLEISQSVTAYGRQMID 706
Query: 1432 KAISFVNENEK---------WKAKVIYGDTDRYTV 1457
S V + K A+VIYGDTD V
Sbjct: 707 LTKSAVEQIYKEGYLDGKCPCDAQVIYGDTDSVMV 741
>gi|390596710|gb|EIN06111.1| delta DNA polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1052
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 229/507 (45%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + S +H +VG
Sbjct: 256 LRILSFDIECAGRKGIFPEANVDPVIQIANMVTIQGESKPFIRNVFTLNSCAH---IVG- 311
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E + + + DPD+++G++I L +L +RA L + R
Sbjct: 312 --SQVLSYDDESQMLQAWRDFVEQVDPDVVIGYNISNFDLPYLMDRAKALKANKFPFLGR 369
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+ D+ S + +G+ + + GR+ L
Sbjct: 370 MR-NVRTQVKDTHFSSKA-------------------------YGQRDSKETAMEGRLQL 403
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ E KL YT+ +V L + + V+T+ +G +R R Y + A
Sbjct: 404 DLLQVMQREQKLRSYTLNSVCAQFLGEQKEDVHHSVITE-LQNGTPESRRRLAVYCLKDA 462
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E+ARV G+ F +L+RG +V S L R A+ + YL P
Sbjct: 463 YLPQRLMDKLMYLVNYTEMARVTGVPFNYLLARGQSIKVLSQLFRKANDEGYLV--PVFK 520
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 521 GEGSDEQYEG-ATVIEPKKGYYDSPIATLDFSSLYPSIMMAHNLCYTTLLDKATIDR--- 576
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
L +++D+ + + PN +V RKG+LP +LE+++S R K +KK
Sbjct: 577 ---------LQLVKDV--DYIQTPNNDFFVTSTKRKGLLPTILEDLISARKRAKADLKK- 624
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK---- 1432
S + + RQLALK+ AN YG+T A G++PC ++ S GR +EK
Sbjct: 625 -ESDPFKRAVLDGRQLALKVSANSVYGFTGATI-GKLPCLAISSSTTSYGRQMIEKTKQE 682
Query: 1433 --AISFVNENEKWKAKVIYGDTDRYTV 1457
A + A+VIYGDTD V
Sbjct: 683 VEAEYCIANGHSHNAEVIYGDTDSVMV 709
>gi|302801963|ref|XP_002982737.1| hypothetical protein SELMODRAFT_155333 [Selaginella moellendorffii]
gi|300149327|gb|EFJ15982.1| hypothetical protein SELMODRAFT_155333 [Selaginella moellendorffii]
Length = 980
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 233/505 (46%), Gaps = 63/505 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R P+P +D + +A + + ++ KS S ++VG+ D
Sbjct: 195 ILSFDIECAGRKGHFPEPEHDPVIQIANLVTVQGESRPMVRNVMTLKSCS---AIVGV-D 250
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
F KE+ L PDI++G++I + +L ERA LGI + R
Sbjct: 251 VMSFDTEKEVLLAWR------KLTPDIIIGYNICKFDMPYLIERAQKLGIVEFPVLGRIR 304
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
S++ D+ S R ++G + + + GR+ ++
Sbjct: 305 -NSRVRVRDATFSSR-------------------------QYGIRESKEVLIEGRVQFDL 338
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
+ M+ + KL+ Y++ +V+ L + + ++ +G R R Y + A L
Sbjct: 339 LQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIIAD-LQNGNSETRRRLAVYCLKDAYL 397
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
++ +L I E+ARV G+ +LSRG +V S +LR +N++ + Q
Sbjct: 398 PQRLLEKLMFIYNYIEMARVTGVPISFLLSRGQSIKVLSQILRKCRQRNFV-VPNIKGQG 456
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLG 1318
A Q E V+E +GFY P+ LDF SLYPS+M+AYNLC+CT +
Sbjct: 457 AGQETFEG-ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVRT---------- 505
Query: 1319 VSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP 1378
D L + + P+G +V + KG+LP +LEE+L+ R + +K+
Sbjct: 506 -----EDQARLNIAPENVNKTPSGETFVKTNMEKGILPEILEELLAARKRARADLKEATD 560
Query: 1379 SQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV- 1437
S + + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E + V
Sbjct: 561 SLE--KAVLDGRQLALKVSANSVYGFTGATV-GQLPCLEISSSVTSYGRQMIEHTKTLVE 617
Query: 1438 ---NENEKW--KAKVIYGDTDRYTV 1457
N + K+ A+VIYGDTD V
Sbjct: 618 GRFNTSNKYDNNAEVIYGDTDSVMV 642
>gi|116199119|ref|XP_001225371.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178994|gb|EAQ86462.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1104
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 147/510 (28%), Positives = 234/510 (45%), Gaps = 66/510 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ DS+ +A D + + + S I
Sbjct: 305 LRILSFDIECAGRKGIFPEAHTDSVIQIANVVTKYGDKKPFVRNVFCLDTTS------PI 358
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E + S + L DPDI+ G++I +L +RA HL + + SR
Sbjct: 359 VATQVMSFDTEDQMLSAWRNFLMEVDPDIITGYNIANFDFPYLIDRAKHLKVRDFDYWSR 418
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
T + S + +S S + + G ++ GR+ L
Sbjct: 419 TRVRS--YSKESNFSSK-------------------------QMGNRDTKVTNISGRLQL 451
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + +L YT+ +V+ L + + ++T+ F P +R R Y + A
Sbjct: 452 DLLQLIQRDHQLRSYTLNSVSSHFLGEQKEDVHHSMITELFEGTP-ESRRRLALYCLKDA 510
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M +L + +E+ARV G+ F +L+RG Q + S L R A Q + P
Sbjct: 511 YLPQRLMEKLSCLENYTEMARVTGVPFNFLLARGQQVKFLSQLCRKALEQKL--VIPNMT 568
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+S+ E V++P +Y P+ LDF SLYPS+M A+NLC+ T + K
Sbjct: 569 TESSEEQYEG-ATVIDPIKNYYDVPIATLDFASLYPSIMQAHNLCYTTLIKK-------- 619
Query: 1317 LGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
D+ KDE ++ P+G M+V K RKG+L ++LEE+LS R KQA ++
Sbjct: 620 -------KDIERWNLKKDEDYIVTPSGDMFVTSKQRKGLLAQILEELLSAR---KQAKRE 669
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + N RQLALK+ AN YG T A +G++PC E+A S GR +E+
Sbjct: 670 LAAETDPFKKAVLNGRQLALKISANSVYGLTGAT-NGKLPCLEIASSTTSFGRQMIERTK 728
Query: 1435 SFVNENE-------KWKAKVIYGDTDRYTV 1457
V EN A+VIYGDTD V
Sbjct: 729 QEV-ENRYNIANGYSHDAQVIYGDTDSVMV 757
>gi|426389767|ref|XP_004065485.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit [Gorilla gorilla gorilla]
Length = 908
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 151/531 (28%), Positives = 239/531 (45%), Gaps = 91/531 (17%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 362 PILGAKVQSYEKEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 413
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P ++A S I + + GR + +
Sbjct: 414 -KVQTFPFLGRVAGLRSNIRDSSFQSK--------------------QTGRRDTKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 512 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMP 571
Query: 1250 -AISPGNHQVASQPAMECLP--------------LVMEPESG-----FYADPVVVLDFQS 1289
S G +E L L + P G +Y P+ LDF S
Sbjct: 572 VVKSEGGEDYTGATVIEPLKGVRPQDRAGAAWELLALTPGRGCSPPRYYDVPIATLDFSS 631
Query: 1290 LYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPK 1349
LYPS+M+A+NLC+ T L P + LG++ +D+ + P G +V
Sbjct: 632 LYPSIMMAHNLCYTTLL---RPGTAHKLGLT------------EDQFIRTPTGDEFVKTS 676
Query: 1350 VRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAG 1408
VRKG+LP++LE +LS R K+A +LA L R + + RQLALK+ AN YG+T A
Sbjct: 677 VRKGLLPQILENLLSAR---KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQ 733
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK------AKVIYGDTD 1453
G++PC E++ S+ GR +EK V + AKV+YGDTD
Sbjct: 734 V-GKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 783
Score = 44.3 bits (103), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 76/200 (38%), Gaps = 52/200 (26%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG VPV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPAQPVPGGP-------PPSRGSVPVLRAFGVTDEGFSVC 138
Query: 61 LHIHRALPYLYVPC---------------------------------ADIPVQL--RQED 85
HIH PY Y P A + V+L R+
Sbjct: 139 CHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRESM 198
Query: 86 DGYM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQ 144
GY H S L + + R+ + + +R G S P+E+++ F ++
Sbjct: 199 FGYHGHGPSPFLRITVALPRLVAPARRLLEQG--IRVAGLGT---PSFAPYEANVDFEIR 253
Query: 145 FLVDYNLYGMGHLHLSKLKF 164
F+VD ++ G L L K+
Sbjct: 254 FMVDTDIVGCNWLELPAGKY 273
>gi|308800812|ref|XP_003075187.1| DPOD1_ORYSA DNA polymerase delta catalytic subunit gb|AAX96341.1| dna
pol (ISS) [Ostreococcus tauri]
gi|116061741|emb|CAL52459.1| DPOD1_ORYSA DNA polymerase delta catalytic subunit gb|AAX96341.1| dna
pol (ISS), partial [Ostreococcus tauri]
Length = 1115
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 228/509 (44%), Gaps = 71/509 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSLVG 1015
+LS++++ R PD + D I + L E SD + ++ L C +VG
Sbjct: 318 ILSVDIECAGRKGHFPDAKQDPVIQIATLVTEQGSDKPIIRAVWTLDTCAP------IVG 371
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
V E L ++ L DPD+L+G++I +L +RA LG+
Sbjct: 372 ---ADVLSFKDERELLRNWGSFLRGCDPDLLIGYNIVNFDFPYLLDRAETLGVADFPYWG 428
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R + +K+ D+ S + +G + + GR+
Sbjct: 429 RM-IGTKVRMRDTVFSSKA-------------------------YGTHESKEISCEGRVQ 462
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ R ++ + KL+ Y++ AV+ L + + + +++ +G R R Y +
Sbjct: 463 FDMLRAIQRDYKLSSYSLNAVSAHFLGEQKEDVHYSAISE-LQNGTPETRRRLAVYCLKD 521
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-----A 1250
A L ++++L + E+ARV G+ +L+RG +V S LLR A +N L
Sbjct: 522 AYLPQRLLDKLMYMYNYIEMARVTGVPLNYLLTRGQSIKVMSQLLRKARQRNMLIPHMAK 581
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
GN Q A E V+E +SG+Y PV LDF SLYPS+M+A+NLC+ T + K +
Sbjct: 582 REGGNVQAEGGVAYEG-ATVLEAKSGYYEVPVATLDFASLYPSIMMAHNLCYSTLVPKHM 640
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
SK N V + P G +V KG+LP +LEE+L R K
Sbjct: 641 VSKLNPEDVGT-----------------SPAGDTFVKANNVKGILPEILEELLGARKRAK 683
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+KK + + + + RQLALK+ AN YG+T A G++PC E++ S GR+ +
Sbjct: 684 ADLKK--ATDPFVKAVLDGRQLALKISANSVYGFTGATV-GQLPCLEISSSTTAYGRTMI 740
Query: 1431 EKAISFVNENEK------WKAKVIYGDTD 1453
+ V E A+VIYGDTD
Sbjct: 741 DHTKKMVEERYTTMNGYAGNAEVIYGDTD 769
>gi|358057090|dbj|GAA96997.1| hypothetical protein E5Q_03671 [Mixia osmundae IAM 14324]
Length = 769
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 205/452 (45%), Gaps = 55/452 (12%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI---GLL 1071
GI +V +E L + + DPD+++G++I + +L RA HL + +
Sbjct: 23 GIVGSEVLSFQEEKELLHQWRNFIVEADPDVIIGYNIANFDIPYLIARAKHLKVHDFAYM 82
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ IS E + +S S + +G + +
Sbjct: 83 SRISTRSAEKMVETKESRFSSKA-------------------------YGTRDSKETPMD 117
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GRI +V ++M+ + KL Y++ AV L + + ++T+ +G +R R Y
Sbjct: 118 GRIQFDVLQVMQRDHKLRSYSLNAVCAHFLGEQKEDVHHSIITE-LQNGTPESRRRLAVY 176
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L ++++L E+ARV G+ F +LSRG Q +V S L R A + Y +
Sbjct: 177 CLKDAYLPQRLLDKLMSFINYIEMARVTGVPFNYLLSRGQQIKVVSQLFRKAGEEGY--V 234
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P S E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T + K
Sbjct: 235 IPSLKGEGSDEQYEG-ATVIEPTRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLMDK--- 290
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
T+ F D + ++ PNG + RKG+LP +LE++LS R K
Sbjct: 291 ---KTIDRLGFLID--------KDYIMTPNGDFFAKSHKRKGLLPTVLEDLLSARKRAKN 339
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K + + + RQLALK+ AN YG+T A G++PC ++ S GR +E
Sbjct: 340 DMKN--ETDPFKRAVLDGRQLALKISANSVYGFTGATV-GKLPCLPISTSTTAYGREMIE 396
Query: 1432 KAISFVNENEKWK------AKVIYGDTDRYTV 1457
+ V + K A+VIYGDTD V
Sbjct: 397 RTKQEVQDKYNTKNGYENDAEVIYGDTDSVMV 428
>gi|168003912|ref|XP_001754656.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694277|gb|EDQ80626.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1156
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 147/545 (26%), Positives = 254/545 (46%), Gaps = 70/545 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R P+P +D + +A + + ++ KS + +VG D
Sbjct: 298 ILSFDIECAGRKGHFPEPEHDPVIQIANLVTVQGEQRPMVKNVMTLKSCA---PIVG-AD 353
Query: 1019 CKVFVCSKEIHL-FSHFIKILCS------FDPDILMGWDIQGGSLGFLAERAAH------ 1065
F KE+ L + + ++ S DPDI++G++I L +L E H
Sbjct: 354 VMSFDTEKEVLLAWKQLMVVVASQEFVKEVDPDIIIGYNICKFDLPYLIENKLHYHLVHF 413
Query: 1066 ------LGIGLLNDISRTPLE-SKIAAGDSEISERGITD---NMLAEPVVAESL------ 1109
L + L+ +S L + I++ + S IT ++ + AE L
Sbjct: 414 LGVLPFLKLFLIALVSVLVLSLANISSLEVLYSYSWITSFAYDIYINSIRAEKLDVVEFP 473
Query: 1110 ----------LAKDAIIED-EWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAE 1158
KDA ++G + L + GR+ ++ + M+ + KL+ Y++ +V+
Sbjct: 474 ILGRIRNSRVRMKDASFSSRQYGIRESKELTIEGRVQFDLLQAMQRDYKLSSYSLNSVSA 533
Query: 1159 TVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARV 1218
L + + +++ +G R R Y + A L ++++L I E+ARV
Sbjct: 534 HFLGEQKEDVHHSIISD-LQNGNSETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMARV 592
Query: 1219 FGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFY 1278
G+ +L+RG +V S LLR A +N++ + + V S + E V++ ++G+Y
Sbjct: 593 TGVPISFLLARGQSIKVLSQLLRKAKQRNFVLPNVKSQGVVSGESFEG-ATVLDAKAGYY 651
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLI 1338
P+ LDF SLYPS+M+AYNLC+CT + D H LR +++
Sbjct: 652 DKPIATLDFASLYPSIMMAYNLCYCTLVRA---------------EDQHYLRLEPEQVTK 696
Query: 1339 PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIA 1398
P+G M+V P + KG+LP +LEE+L+ R K +K + + + + RQLALK+ A
Sbjct: 697 TPSGDMFVKPSLEKGILPEILEELLAARKRAKADLK--LATDPLEKAVLDGRQLALKISA 754
Query: 1399 NVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE------NEKWKAKVIYGDT 1452
N YG+T A G++PC E++ S+ GR ++ V E + A+VIYGDT
Sbjct: 755 NSVYGFTGATI-GQLPCLEISSSVTSFGRQMIDHTKKLVQERFTTANSYSHDAEVIYGDT 813
Query: 1453 DRYTV 1457
D V
Sbjct: 814 DSVMV 818
>gi|402085670|gb|EJT80568.1| DNA polymerase delta catalytic subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1104
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 232/509 (45%), Gaps = 63/509 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A D + + +C ++ I
Sbjct: 305 LRILSFDIECAGRKGIFPEAEIDPVIQIANVVTRYGDKKPFVRNV-FCLDQTS-----SI 358
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ S+E + + L DPDI+ G++I +L RA +L + + +R
Sbjct: 359 VATQILEFSQEEKMLRAWRDFLVEVDPDIITGYNICNFDFPYLLNRAKYLKVKDFDQWTR 418
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P + A DS S + + G + GR+ L
Sbjct: 419 LP-SVRSTAKDSNFSSK-------------------------QMGNRDTKSTNTNGRLQL 452
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + +L YT+ +V L + + + ++T+ F P +R R Y + A
Sbjct: 453 DLLQLIQRDHQLRSYTLNSVCSHFLGEQKEDVHYTMITELFNGTP-ESRRRLALYCLKDA 511
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E+ARV G+ F +LS+G Q + S + R A Q + P
Sbjct: 512 YLPQRLMDKLSCLENYTEMARVTGVPFNFLLSKGQQIKFVSQMFRKALEQKL--VVPNLR 569
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP G+Y P+ LDF SLYPS+M A+NLC+ T + +
Sbjct: 570 VEGSDDQYEG-ATVIEPTRGYYDAPIATLDFASLYPSIMQAHNLCYTTLISQ-------- 620
Query: 1317 LGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ +F+ + KDE + P G M+V K RKG+L ++LEE+LS R KQA ++
Sbjct: 621 KAIDAFKLE-------KDEDYTVTPTGDMFVTVKRRKGLLAQILEELLSAR---KQAKRE 670
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + N RQLALK+ AN YG T A +G+ PC ++A S GR +EK
Sbjct: 671 LAVETDPFKKAVLNGRQLALKISANSVYGLTGAT-NGKFPCLQIASSTTSYGRQMIEKTK 729
Query: 1435 SFVNENEKWK------AKVIYGDTDRYTV 1457
V + A+VIYGDTD V
Sbjct: 730 QEVEAKYRIANGYSHDAQVIYGDTDSVMV 758
>gi|452986964|gb|EME86720.1| hypothetical protein MYCFIDRAFT_202624 [Pseudocercospora fijiensis
CIRAD86]
Length = 1089
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 241/516 (46%), Gaps = 77/516 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y + + R++ +
Sbjct: 291 LRVLSFDIECAGRKGVFPEANVDPVIQIANV------------VTRYGEEKPFVRNVFCM 338
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSF-------DPDILMGWDIQGGSLGFLAERAAHLGIG 1069
C + V + ++ F K+L ++ DPD+++G++I +L +RAAHL
Sbjct: 339 DTCSLIV-NTQLFEFDQEEKMLMAWRDFIEEVDPDVIIGYNIANFDFPYLLDRAAHL--- 394
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDA-IIEDEWGRTHASGL 1128
++R P S++ S +AKD + G A
Sbjct: 395 ---KVARFPFLSRLRNVKS---------------------VAKDTNFASKQMGNRDAKAT 430
Query: 1129 HVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRC 1188
+ GR+ L++ +L++ + +L YT+ +V+ L + + ++T+ + P +R R
Sbjct: 431 NTNGRLQLDLLQLIQRDYQLRSYTLNSVSAHFLNEQKEDVHHTMITELYNGTP-ESRRRL 489
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
Y + A L +M++L + +E+ARV G+ F +L++G Q + S L R A Q
Sbjct: 490 AVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLAKGQQIKFISQLFRKALEQQL 549
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
+ P +S E V+EP G+Y PV LDF SLYPS+M A+NLC+ T L K
Sbjct: 550 --VVPNLKTDSSDEQYEG-ATVIEPTRGYYDVPVATLDFASLYPSIMQAHNLCYTTLLNK 606
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
K L + +D ++ ++ PNG ++ KVRKG+L ++LEE+L R
Sbjct: 607 TAIEK------------LDLKKD--EDYIVTPNGDLFCTTKVRKGLLSQILEELLGAR-- 650
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 651 -KRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLAIASSTTSYGR 708
Query: 1428 STLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + A+VIYGDTD V
Sbjct: 709 QMIEKTKAEVEARYTIANGYSHDAQVIYGDTDSVMV 744
>gi|409081586|gb|EKM81945.1| hypothetical protein AGABI1DRAFT_55049 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1089
Score = 170 bits (431), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 231/508 (45%), Gaps = 60/508 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAVEIYVLLYCKSESHQRSLVG 1015
L +LS +++ R + P+ + D I + + + D + ++ + +
Sbjct: 292 LRILSFDIECAGRKGIFPEAQTDPVIQIANMVTRHGEDKP-------FIRNVFNLNTCAN 344
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I +V ++E LF + + DPD++ G++I +L +RA L + N +
Sbjct: 345 IVGSQVLTFTEEAPLFQAWRDFVEEVDPDVITGYNIANFDFPYLMDRAKALEVANFNYLG 404
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R + ++ S R +G+ + + GR+
Sbjct: 405 RLR-NVRTEVKNTHFSSRA-------------------------YGQRDSKETPLYGRLQ 438
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
+++ + M+ E KL YT+ +V L + + V+T+ + P +R R Y +
Sbjct: 439 MDILQFMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITELYNGTP-ESRRRLAVYCLKD 497
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L ++++L +E+ARV G+ F +LSRG +V S L R A+ + Y+ I
Sbjct: 498 AYLPQRLLDKLMCFVNYTEMARVTGVPFNYLLSRGQSIKVLSQLFRKANEEGYV-IPALK 556
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ A E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T + + K
Sbjct: 557 GEGTDGEAYEG-ATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLIEGSMIEK-- 613
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
L +++D+ + + PN +V RKG+LP +LE+++S R K +K
Sbjct: 614 ----------LDLVKDV--DYIQTPNNDFFVTSMKRKGLLPTILEDLISARKRAKADLK- 660
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + RQLALK+ AN YG+T A G++PC ++ S+ GR +EK
Sbjct: 661 -MEKDPFKKAVLDGRQLALKISANSVYGFTGATV-GKLPCLPISSSVTAYGRQMIEKTKQ 718
Query: 1436 FVN------ENEKWKAKVIYGDTDRYTV 1457
V ++ A+VIYGDTD V
Sbjct: 719 EVEAEFCIANGHQYDARVIYGDTDSVMV 746
>gi|389634743|ref|XP_003715024.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae 70-15]
gi|351647357|gb|EHA55217.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae 70-15]
gi|440470521|gb|ELQ39588.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae Y34]
gi|440488502|gb|ELQ68227.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae P131]
Length = 1103
Score = 170 bits (431), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 146/508 (28%), Positives = 232/508 (45%), Gaps = 61/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A D + + +C ++ I
Sbjct: 304 LRILSFDIECAGRKGIFPEANMDPVIQIANVVTKYGDKKPFVRNV-FCLDQTSP-----I 357
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ S+E + S + + DPDI+ G++I +L +RA HL + + SR
Sbjct: 358 VATQILEFSQEQKMLSSWRNFMVEVDPDIITGYNIANFDFPYLLDRARHLKVKDFDLWSR 417
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P K A +S S + + G ++ GR+ L
Sbjct: 418 IP-SIKSVAKESNFSSK-------------------------QMGNRDTKATNINGRLQL 451
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y + A
Sbjct: 452 DLLQLIQRDHQLRSYTLNSVCSHFLGEQKEDVHHTMITELFNGTP-ESRRRLALYCLKDA 510
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E++RV G F +L+RG Q R S L R A Q L I N
Sbjct: 511 YLPQRLMDKLSCLENYTEMSRVTGAPFNFLLTRGQQVRFLSQLFRKALEQK-LVIP--NL 567
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
V S V+EP G+Y PV LDF SLYPS+M A+NLC+ T + K
Sbjct: 568 SVQSSDEQYEGATVIEPTRGYYDVPVATLDFASLYPSIMQAHNLCYTTLVTK------KA 621
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ + D ++ ++ PNG +V K RKG+L ++LEE+L+ R KQA ++L
Sbjct: 622 IDAFGLKKD--------EDYIVTPNGDFFVTIKQRKGLLAQILEELLAAR---KQAKREL 670
Query: 1377 APSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
A + + N RQLALK+ AN YG T A +G++PC E+A S GR +EK
Sbjct: 671 AVETDPFKKAVLNGRQLALKISANSVYGLTGAT-NGKLPCLEIASSTTSFGRQMIEKTKE 729
Query: 1436 F------VNENEKWKAKVIYGDTDRYTV 1457
V A+VIYGDTD V
Sbjct: 730 EVEKKYRVANGYSHDAQVIYGDTDSVMV 757
>gi|169849845|ref|XP_001831621.1| delta DNA polymerase [Coprinopsis cinerea okayama7#130]
gi|116507259|gb|EAU90154.1| delta DNA polymerase [Coprinopsis cinerea okayama7#130]
Length = 1081
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 235/511 (45%), Gaps = 66/511 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + I + + SH +VG
Sbjct: 285 LRILSFDIECAGRKGVFPEASVDPVIQIANMVTRQGESQPFIRNVFTLNTCSH---IVG- 340
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E + + + DPD+++G++I G +L +RA L + + R
Sbjct: 341 --SQVLSFEDEGKMLQAWRDFVSEVDPDLVIGYNISGFDFPYLMDRAQALKLTKFPYLGR 398
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
K ++ S R +G+ + + GR+ L
Sbjct: 399 FK-NIKTEVKNTHFSSRA-------------------------YGQRDSKETTLDGRLQL 432
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ + M+ E KL Y++ +V L + + V+T+ +G +R R Y + A
Sbjct: 433 DILQFMQREHKLRSYSLNSVCAQFLGEQKEDVHHSVITE-LQNGTPESRRRLAIYCLKDA 491
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS---P 1253
L +M++L +E+ARV G+ F +L+RG +V S L R A+++ YL S
Sbjct: 492 YLPQRLMDKLMCFVNYAEMARVTGVPFNFLLARGQSIKVLSQLYRKANSEGYLIPSMKGG 551
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
G+ + + A V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T L K +
Sbjct: 552 GDGEDQYEGAT-----VIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKATIDR 606
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
L +++D+ + + PN + P RKG+LP +LE+++S R K +
Sbjct: 607 ------------LSLVKDV--DYVQTPNNDYFATPVRRKGLLPTILEDLISARKRAKADL 652
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + + + RQLALK+ AN YG+T A G++PC ++ S+ GR +E+
Sbjct: 653 KK--ETDPFKKAVLDGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTAYGRQMIERT 709
Query: 1434 -------ISFVNENEKWKAKVIYGDTDRYTV 1457
+ N +E A+VIYGDTD V
Sbjct: 710 KQEVEAEYTIANGHEH-DAEVIYGDTDSVMV 739
>gi|453087535|gb|EMF15576.1| DNA polymerase delta catalytic subunit [Mycosphaerella populorum
SO2202]
Length = 1107
Score = 169 bits (429), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 234/512 (45%), Gaps = 69/512 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+ D + NVV E A ++C +
Sbjct: 309 LRVLSFDIECAGRKGVFPEASIDPVIQIANVVTRYGE-----AKPFVRNVFCMD-----T 358
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+ I + ++F +E + + L DPD+++G++I +L +RAAHL G
Sbjct: 359 VSSIVNTQLFEFDQEEKMLMAWRDFLEEVDPDVIIGYNIANFDFPYLLDRAAHLKCGHF- 417
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
P S++ S E + G + + G
Sbjct: 418 -----PFWSRLKNVRSVAKETNFASKQM--------------------GNRDSKATNTNG 452
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ +L++ + +L YT+ +V+ L+ + + ++T+ + P +R R Y
Sbjct: 453 RLQLDLLQLIQRDYQLRSYTLNSVSAHFLKEQKEDVHHTMITELYNGTP-ESRRRLAVYC 511
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L +M++L + +E+ARV G+ F +LS+G Q + S L R A Q +
Sbjct: 512 LKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSKGQQVKFISQLFRKALEQQL--VV 569
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P S E V+EP G+Y P+ LDF SLYPS+M A+NLC+ T L K
Sbjct: 570 PDLKSEGSDEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLLNK---- 624
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
N + + + D ++ ++ PNG ++ KVRKG+L ++LEE+L R K+A
Sbjct: 625 --NAIAKLNLKKD--------EDYIVTPNGDLFCTTKVRKGLLSQILEELLGAR---KRA 671
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
K+LA + + N RQLALK+ AN YG T A G++PC +A S GR +E
Sbjct: 672 KKELAIETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLAIASSTTAYGRQMIE 730
Query: 1432 K------AISFVNENEKWKAKVIYGDTDRYTV 1457
K A + A+VIYGDTD V
Sbjct: 731 KTKEEVEARYTIANGYSHDAQVIYGDTDSVMV 762
>gi|67900676|ref|XP_680594.1| hypothetical protein AN7325.2 [Aspergillus nidulans FGSC A4]
gi|40742186|gb|EAA61376.1| hypothetical protein AN7325.2 [Aspergillus nidulans FGSC A4]
gi|259483322|tpe|CBF78614.1| TPA: catalytic subunit of DNA polymerase delta (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 1044
Score = 169 bits (429), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 239/515 (46%), Gaps = 78/515 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P +D + +A V Y +S+ R++ +
Sbjct: 305 LRILSFDIECAGRKGIFPEPNHDPVIQIANV------------VTRYGESKPFIRNVFVM 352
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSF-------DPDILMGWDIQGGSLGFLAERAAHLGIG 1069
C + V + +I F K+L ++ DPD+++G++I +L +RA HL
Sbjct: 353 NTCSLIV-NTQILEFQQEEKMLMAWRDFIQKVDPDVIIGYNIANFDFPYLLDRAKHL--- 408
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
+ P +++ SE + + + G +
Sbjct: 409 ---KCTNFPYWTRLNGMRSEAKDTNFSSKQM--------------------GNRDTKATN 445
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
GR+ L++ +L++ + L YT+ +V+ L + + ++T+ + P +R R
Sbjct: 446 TNGRLQLDLLQLVQRDHNLRSYTLNSVSYEFLGEQKEDVHHTMITELYNGTPD-SRRRLA 504
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q L
Sbjct: 505 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFLSQLYRKA-LQQQL 563
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
I N + + E V+EP +Y P+ LDF SLYPS++ A+NLC+ T L
Sbjct: 564 VIP--NMKSTDEQDYEG-ATVIEPIRDYYDVPIATLDFASLYPSIIQAHNLCYTTLL--- 617
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
N V+ + D ++ ++ PNG M+ PKVRKG+L ++LEE+LS R
Sbjct: 618 -----NKNSVAGMKKD--------EDYIVTPNGDMFCTPKVRKGLLSQILEELLSAR--- 661
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 662 KKAKKELAQETDPFKKAVLNGRQLALKVSANSVYGLTGATV-GKLPCLAIASSTTSYGRQ 720
Query: 1429 TLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + AKVIYGDTD V
Sbjct: 721 MIEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMV 755
>gi|449681697|ref|XP_004209898.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Hydra
magnipapillata]
Length = 1082
Score = 169 bits (429), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 230/514 (44%), Gaps = 77/514 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
+ +LS +++ R + P+P D + +A + ++ + + + ++ L C +
Sbjct: 288 IRILSFDIECAGRKGIFPEPEKDKVIQIANMVIYQGEKEPFIRNVFTLDTCAP------I 341
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG +V E LF + + DPD++ G++I +L RA L + +
Sbjct: 342 VG---SQVLTYQNESDLFKAWSDFVNEVDPDMITGYNIVNFDFPYLLNRAKVLNVPSFSY 398
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R L K + R +G+ ++ G
Sbjct: 399 LGRI-LSEKTTISSTVFQSRA-------------------------YGKRENKVINTTGV 432
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ ++ + KL YT+ +V+ L+ + + +++ +G + R R Y +
Sbjct: 433 VQFDLLHILLRDYKLRSYTLNSVSYHFLKEQKEDVHHAIISD-LQNGNEQTRRRLAVYCM 491
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---- 1249
A L L ++++L + E+ARV G+ +L+RG Q +V S LLR + +++
Sbjct: 492 KDAILPLRLLDKLMCVINYMEMARVTGVPLSYLLTRGQQVKVVSQLLRKSKEHDFILPAQ 551
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
I G+ + V++P G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 552 KIEAGDEYEGAT--------VIDPIKGYYRKPIATLDFASLYPSIMMAHNLCYTTLLSKC 603
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
+ N DE ++ P +V VRKG+LP +LE +LS R
Sbjct: 604 DLERMNP-----------------DEYIVTPCNHYFVKKSVRKGLLPEILENLLSARKKA 646
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
K +K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 647 KSDLK--GETDIFKAKVLDGRQLALKISANSVYGFTGAQV-GKLPCIEISSSVTAFGRQM 703
Query: 1430 LEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+E+ V + K+ +KVIYGDTD V
Sbjct: 704 IERTKQLVEDKYNIKNGYKYDSKVIYGDTDSVMV 737
>gi|397565087|gb|EJK44470.1| hypothetical protein THAOC_36985 [Thalassiosira oceanica]
Length = 1658
Score = 169 bits (429), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 139/250 (55%), Gaps = 40/250 (16%)
Query: 1243 AHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCF 1302
+H Y SP Q A+EC + +EP+SGFY DPVVV DF +LYPS++IAYNLC+
Sbjct: 1371 SHDMGYFFFSPSKIDCTKQEALECQAMTLEPQSGFYFDPVVVCDFTALYPSLVIAYNLCY 1430
Query: 1303 CTCLGKI--------LPSKENTLG------------VSSFRPDLHVL--------RDLKD 1334
T GK+ + + T G ++ R + L + +D
Sbjct: 1431 TTLAGKLDYHSTRAEMRREGKTTGKVGPFFYSERRTAATIRHHMKTLSVPSSQGKKRKRD 1490
Query: 1335 ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL-----APSQQILHRIFNA 1389
+ P G ++V V KGVLP++L+E+LSTR M+K+A K+ A S +L +I A
Sbjct: 1491 RAYVIPTGSVFVSESVLKGVLPQVLDEMLSTRAMLKKAAKEYKKRVPALSPAVLRQI-EA 1549
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN-----ENEKWK 1444
RQLALK +ANVTYGYT+A FSGR +AD+IV+ GR TL AI+ N +W
Sbjct: 1550 RQLALKYVANVTYGYTSATFSGRSAVPLVADAIVEMGRRTLTNAINLANSWGQVRGGRWA 1609
Query: 1445 -AKVIYGDTD 1453
AKV+YGDTD
Sbjct: 1610 GAKVLYGDTD 1619
Score = 98.6 bits (244), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 148/334 (44%), Gaps = 55/334 (16%)
Query: 957 LTLLSIEVQAESRGD----------LRPDPRYDSINVVALAFEND--SDHAVEIY----V 1000
LT++SIEV + R + PD D I V + D ++EI +
Sbjct: 981 LTIMSIEVHVQCRIKPSTKDNKEMAMVPDSSRDCIFAVVYVYSRDPGGGESLEILEKGCI 1040
Query: 1001 LLYCKSESH-----------QRSLVGIPDCKVF-VCSKEIHLFSHFIKILCSFDPDILMG 1048
L+ + + ++ +GI V S E L F I+ DPD LM
Sbjct: 1041 LVTIEKKGRASDGSSSVPKVSKAAMGISSGTVIEKASSERSLLLRFASIVKLKDPDCLMS 1100
Query: 1049 WDIQGGSLGFLAERAAHLG---------------IGLLNDISRTPLESKIAAGDSEISER 1093
WD G +G++ ER LG + + + RTP +S +A S+ +
Sbjct: 1101 WDTLGLGIGYIVERGVALGKPGTDHNGVNASSQTVDMARLLGRTP-KSVPSANMSQNA-- 1157
Query: 1094 GITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGL---HVGGRIVLNVWRLMRGEVKL-N 1149
G D + E + K + + EW +G+ + GRIVL W++ E K N
Sbjct: 1158 GPLDMLKGEDSHVD---LKGSGLGAEWDDRVGAGVAASSISGRIVLCGWKICSTECKHPN 1214
Query: 1150 MYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMI 1209
A+ +++ +++P +LTKW+ G R+R +EY + +A N+ + + LD++
Sbjct: 1215 ASYQPAIVSSIMNKRMPHHDDLILTKWYGMNNGAQRWRVIEYRMLQAMANILLFDALDVL 1274
Query: 1210 NRTSELARVFGIDFFSVLS--RGSQYRVESMLLR 1241
R E AR+ G++F L RGSQY+VE +LLR
Sbjct: 1275 GRAGEAARLSGVEFSQSLPGIRGSQYKVEGVLLR 1308
>gi|222615647|gb|EEE51779.1| hypothetical protein OsJ_33228 [Oryza sativa Japonica Group]
Length = 1100
Score = 169 bits (429), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 146/520 (28%), Positives = 242/520 (46%), Gaps = 76/520 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R P+P +D + +A + + ++ KS S +VG+ D
Sbjct: 298 ILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQGEGQPFVRNVMTLKSCS---PIVGV-D 353
Query: 1019 CKVFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRT 1077
F +++ L + FI+ DPDI++G++I L +L ERA L I + R
Sbjct: 354 VMSFDTERDVLLAWRDFIR---EVDPDIIIGYNICKFDLPYLIERAEVLKIVEFPILGRI 410
Query: 1078 PLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLN 1137
S++ D+ S R ++G + + V GR+ +
Sbjct: 411 R-NSRVRVRDTTFSSR-------------------------QYGMRESKDVAVEGRVQFD 444
Query: 1138 VWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAK 1197
+ + M+ + KL+ Y++ +V+ L + + +++ +G R R Y +
Sbjct: 445 LLQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISD-LQNGNSETRRRLAVYCLKVGL 503
Query: 1198 LNLE-------------IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
L+ + ++++L I E+ARV G+ +LSRG +V S LLR A
Sbjct: 504 LDCQWLRYLPDAYLPQRLLDKLMYIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAK 563
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
+N L I Q + Q E V+E +GFY P+ LDF SLYPS+M+AYNLC+CT
Sbjct: 564 QKN-LVIPNIKGQASGQDTFEG-ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCT 621
Query: 1305 CLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILS 1364
++P + D L + + P+G +V P V+KG+LP +LEE+L+
Sbjct: 622 ----LVPPE-----------DARKLNLPPESVNKTPSGETFVKPDVQKGILPEILEELLA 666
Query: 1365 TRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIV 1423
R K+A L ++ R + + RQLALK+ AN YG+T A G++PC E++ S+
Sbjct: 667 AR---KRAKADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATV-GQLPCLEISSSVT 722
Query: 1424 QCGRSTLEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
GR +E V + + A+VIYGDTD V
Sbjct: 723 SYGRQMIEHTKKLVEDKFTTLGGYEHNAEVIYGDTDSVMV 762
>gi|47187286|emb|CAG14131.1| unnamed protein product [Tetraodon nigroviridis]
Length = 138
Score = 169 bits (428), Expect = 1e-38, Method: Composition-based stats.
Identities = 76/125 (60%), Positives = 98/125 (78%)
Query: 1185 RYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAH 1244
R++ V++ V R + ++++ Q D+I RTSELARVFGI FF VL+RGSQYRVESM+LRLA
Sbjct: 9 RWKMVDFYVSRVRGTMQLLQQQDIIGRTSELARVFGIQFFHVLTRGSQYRVESMMLRLAK 68
Query: 1245 TQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
NY+ ++P Q A Q A +CLPLVMEPES FY++ VVVLDFQSLYPS++IAYN C+ T
Sbjct: 69 PLNYIPVTPSVQQRAHQRAPQCLPLVMEPESRFYSNSVVVLDFQSLYPSIIIAYNYCYST 128
Query: 1305 CLGKI 1309
CLG +
Sbjct: 129 CLGHV 133
>gi|145514650|ref|XP_001443230.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410608|emb|CAK75833.1| unnamed protein product [Paramecium tetraurelia]
Length = 980
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 60/451 (13%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
IP V KE L + F DPDI++G++IQ + ++ RA +L +
Sbjct: 211 IPGAWVKSFQKEEDLLNEFQVFFQGLDPDIIIGYNIQNFDIPYILNRAQNLKLKNYGKFG 270
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R P TD +S + + G +++ GRI
Sbjct: 271 RIP-----------------TD---------QSTIKNGKFLSKAMGMRETKDINIEGRIQ 304
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ M E KL+ +++ V+ L+++ + + ++ P R R Y +
Sbjct: 305 LDMMIHMMKEHKLSSFSLNNVSFQFLKQQKEDVHYSIIYTLQNKNP-ETRKRIAVYCLKD 363
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A+L + +M++L + +E+ARV G+ + RG Q +V S LLR A ++Y I P
Sbjct: 364 AELPILLMDKLCCLYNYAEMARVTGVPVNYLFMRGQQIKVASQLLRKA--KHYDFIIPTE 421
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
H ++ + V++P FY P+ LDF SLYPS+M+A+N+C+ T
Sbjct: 422 HFKSTDQEYQG-AFVLDPVKNFYKVPIATLDFASLYPSIMMAHNMCYSTL---------- 470
Query: 1316 TLGVSSFRPDLHVLRDLKDELLI--PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
L S F+ L DE + P ++V P VRKG+LP +LE++++ R K+A
Sbjct: 471 -LNTSPFKV------GLADEQVTVSPETNAIFVKPNVRKGMLPLILEDLINAR---KKAK 520
Query: 1374 KKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+LA + + + RQLALK+ AN YG+T A G++PC E++ SI GR ++
Sbjct: 521 NQLAQETDPFKKAVLDGRQLALKISANSVYGFTGAQV-GQLPCLEISASITSFGRQMIQF 579
Query: 1433 AISFVNEN------EKWKAKVIYGDTDRYTV 1457
V E+ ++ A+VIYGDTD V
Sbjct: 580 TRDTVLEHYSKKNGAEFDAEVIYGDTDSVMV 610
>gi|410982338|ref|XP_003997514.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 3 [Felis
catus]
Length = 1124
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 147/519 (28%), Positives = 239/519 (46%), Gaps = 80/519 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV +E + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 362 PILGAKVQSYEREEELLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 413
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P +++ S I + + GR + + +
Sbjct: 414 -KVESFPFLGRVSGLRSTIRDSSFQSK--------------------QTGRRDSKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +L+RG Q +V S LLR A + L
Sbjct: 512 CLKDAFLPLRLLERLMVLVNAMEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMREGLLMP 571
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESG-------FYADPVVVLDFQSLYPSMMIAYNLC 1301
+ G +E L +P SG +Y P+ LDF SLYPS+M+A+NLC
Sbjct: 572 VVKTEGVEDYTGATVIEPLK-GYDPVSGWGCLPPRYYDVPIATLDFSSLYPSIMMAHNLC 630
Query: 1302 FCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEE 1361
+ T L P LG++ +D+ + P G +V VRKG+LP++LE
Sbjct: 631 YTTLL---RPGAAQKLGLT------------EDQFIKTPTGDEFVKTSVRKGLLPQILEN 675
Query: 1362 ILSTRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
+LS R K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++
Sbjct: 676 LLSAR---KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQ 731
Query: 1421 SIVQCGRSTLEKAISFVNENEKWK------AKVIYGDTD 1453
S+ GR +EK V + AKV+YGDTD
Sbjct: 732 SVTGFGRQMIEKTKQLVESKYTVENGYGTSAKVVYGDTD 770
>gi|189207907|ref|XP_001940287.1| DNA polymerase delta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976380|gb|EDU43006.1| DNA polymerase delta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1115
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 212/450 (47%), Gaps = 56/450 (12%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I ++F E + + + DPD+++G++I +L +RA HL +
Sbjct: 362 IVSTEIFSYQSEGEMLMKWRDFVEQVDPDVIIGYNINNFDFPYLLDRAKHL------KLQ 415
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
+ P +++ S++ + L G + GR+
Sbjct: 416 KFPYWTRLKTVQSKVESSHFSSKQL--------------------GNRDTKTTNTNGRLQ 455
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
L++ +L++ + L YT+ +V L+ + + ++T+ F +G +R R Y +
Sbjct: 456 LDLLQLIQRDHHLRSYTLNSVCAHFLKEQKEDVHHSMITELF-NGDCNSRRRLAVYCLKD 514
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L ++++L + +E+ARV G+ F +LSRG Q R S L R A + L I
Sbjct: 515 AYLPQRLLDKLMCLVNYTEMARVTGVPFNYILSRGQQIRFISQLFRKA-LDHQLIIPDLP 573
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+Q S E V+EP+ G+Y DPV LDF SLYPS+M A+NLC+ T L K K
Sbjct: 574 NQGDSNDQYEG-ATVIEPKRGYYRDPVATLDFASLYPSIMQAHNLCYTTWLDKQTVEK-- 630
Query: 1316 TLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
L+ KDE ++ P+G M+ K RKG+L +LEE+LS R K+A +
Sbjct: 631 -------------LKMKKDEDYIVTPHGDMFCTAKTRKGLLTEILEEVLSAR---KKAKR 674
Query: 1375 KLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
+LA + + N RQLALK+ AN YG T A +G++PC +A S GR +E+
Sbjct: 675 ELATETDPFKKAVLNGRQLALKVTANSVYGLTGAT-NGKLPCLAIASSTTSFGRQMIERT 733
Query: 1434 ISFVNENEKWK------AKVIYGDTDRYTV 1457
+ V A+VIYGDTD V
Sbjct: 734 KAEVEAKYNIANGYTHDAEVIYGDTDSVMV 763
>gi|169615194|ref|XP_001801013.1| hypothetical protein SNOG_10753 [Phaeosphaeria nodorum SN15]
gi|160702905|gb|EAT82147.2| hypothetical protein SNOG_10753 [Phaeosphaeria nodorum SN15]
Length = 1115
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 139/509 (27%), Positives = 232/509 (45%), Gaps = 62/509 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A S + ++C ++ I
Sbjct: 309 LRILSFDIECAGRKGIFPEPNVDPVIQIANVVTR-SGESKPFVRNVFCMD-----TVSPI 362
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ S E + + L DPD+++G++ +L +RA HL + +
Sbjct: 363 VATQILSFSNEGEMLMKWRDFLEEVDPDVIIGYNTSNFDFPYLLDRAKHL------KLPK 416
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P S++ + +++ + L G + GR+ L
Sbjct: 417 FPYWSRLKSVQTKVQTSNFSSKQL--------------------GNRDTKTANTNGRLQL 456
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + +L YT+ +V L+ + + ++T+ + +G +R R Y + A
Sbjct: 457 DLLQLIQRDHQLRSYTLNSVCAHFLKEQKEDVHHSMITELY-NGDSNSRRRLAVYCLKDA 515
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L ++++L + +E+ARV G+ F +L+RG Q R S L R A ++ I P
Sbjct: 516 YLPQRLLDKLMCLVNYTEMARVTGVPFNYILARGQQIRFVSQLFRKA--LDHQLIVPDLP 573
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
V+EP+ G+Y PV LDF SLYPS+M A+NLC+ T L
Sbjct: 574 NQGDNGDQYEGATVIEPKRGYYKQPVATLDFASLYPSIMQAHNLCYTTWLD--------- 624
Query: 1317 LGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
R + L+ KDE ++ PNG M+ K RKG+L ++LEE+L R K+A K+
Sbjct: 625 ------RQTVEKLKMKKDEDYIVTPNGDMFCTAKTRKGLLSQILEELLGAR---KRAKKE 675
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
LA + + N RQLALK+ AN YG T A +G++PC +A S GR +EK
Sbjct: 676 LAVETDPFKKAVLNGRQLALKVTANSVYGLTGAT-NGKLPCLAIASSTTSIGRQMIEKTK 734
Query: 1435 SFVNENEKWK------AKVIYGDTDRYTV 1457
+ V A+VIYGDTD V
Sbjct: 735 AEVEAKYNIANGYSHDAEVIYGDTDSVMV 763
>gi|367024855|ref|XP_003661712.1| hypothetical protein MYCTH_2301456 [Myceliophthora thermophila ATCC
42464]
gi|347008980|gb|AEO56467.1| hypothetical protein MYCTH_2301456 [Myceliophthora thermophila ATCC
42464]
Length = 1081
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 233/508 (45%), Gaps = 61/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ +D++ +A + + + + S I
Sbjct: 306 LRVLSFDIECAGRKGIFPEANHDAVIQIANIVTKYGEKKPFVRNVFCLDTTS------PI 359
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
++ KE + S + L DPDI+ G++I +L +RA HL + SR
Sbjct: 360 VATQILSFDKEEDMLSAWRDFLVQVDPDIITGYNIANFDFPYLLDRAKHLKVQGFEYWSR 419
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
RG+ +S + + G ++ GR+ L
Sbjct: 420 L---------------RGV-----------KSFSKDTSFSSKQMGNRDTKATNIHGRLQL 453
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + +L YT+ +V+ L + + ++T+ F P +R R Y + A
Sbjct: 454 DLLQLIQRDHQLRSYTLNSVSFHFLGEQKEDVHHSMITELFEGTP-ESRRRLALYCLKDA 512
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M +L + +E+ARV G+ F +L+RG Q + S L R A Q + P
Sbjct: 513 YLPQRLMEKLSCLENYTEMARVTGVPFNFLLARGQQVKFLSQLYRKALEQKL--VIPNLR 570
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
+S+ E V+EP +Y P+ LDF SLYPS+M A+NLC+ T + K K N
Sbjct: 571 SESSEEQYEG-ATVIEPIRNYYDVPIATLDFASLYPSIMQAHNLCYTTLIKKKDVEKWN- 628
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
+ D ++ ++ P+G M+V K RKG+L ++LEE+L+ R KQA ++L
Sbjct: 629 -----LKKD--------EDYIVTPSGDMFVTTKQRKGLLAQILEELLAAR---KQAKREL 672
Query: 1377 APSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
A + + N RQLALK+ AN YG T A +G++PC E+A S GR +EK
Sbjct: 673 AAETDPFKKAVLNGRQLALKISANSVYGLTGAT-NGKLPCLEIASSTTGFGRQMIEKTKQ 731
Query: 1436 FVNEN------EKWKAKVIYGDTDRYTV 1457
V + A+VIYGDTD V
Sbjct: 732 EVEKRYTIANGYSHDAQVIYGDTDSVMV 759
>gi|440804295|gb|ELR25172.1| polymerase (DNA directed), delta 1, catalytic subunit [Acanthamoeba
castellanii str. Neff]
Length = 1003
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 240/519 (46%), Gaps = 82/519 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+LS +++ R + P+P D + NVV++ EN ++ + C S
Sbjct: 199 FRVLSFDIECAGRRGVFPEPEMDPVIQIANVVSVQGEN-GPIVKNVFTVKKC-------S 250
Query: 1013 LVGIPDCKVFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
+ + + + E+ L + F++I+ DPDIL G++I + +L RA LG L
Sbjct: 251 PIAGAEVRCYRTEAEMLLAWRKFVEIV---DPDILTGYNIINFDIWYLLTRAQKLG---L 304
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
D P +I A S + + + +G+ + + +G
Sbjct: 305 VDF---PFWGRIKAQRSTMKDTTFSSKA--------------------FGKRDSKEIKIG 341
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ L+V ++ + KL YT+ V++ L + + ++T + +G R R Y
Sbjct: 342 GRVQLDVLLVITRDYKLRSYTLNYVSQHFLEEQKEDVHHSIITDLY-NGTNDQRRRLAVY 400
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L ++++L I E+ARV G+ +L+RG Q +V S L R+A+T++ L
Sbjct: 401 CIKDALLPQRLLDKLMCIINYIEMARVTGVPIAFLLTRGQQIKVLSQLYRIANTEDLLIP 460
Query: 1250 ----AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
A G + A +V+ P++ +Y P+ LDF SLYPS+MIA+NLC+ T
Sbjct: 461 AVKVAKPTGEDGKGYKGA-----IVIAPKTAYYDVPIATLDFASLYPSIMIAHNLCYSTL 515
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
L P + N+ S+ P G +V + + G+LPR+L +L
Sbjct: 516 LA---PGEVNSHPPESYERS--------------PGGECFVREETKPGLLPRILNGLLEA 558
Query: 1366 RIMVKQAIKK-LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
R K +KK P +Q + N RQLALK+ AN YG+T A G++PC ++ ++
Sbjct: 559 RARAKAEMKKETNPFKQA---VLNGRQLALKVSANSVYGFTGATI-GKLPCLAISSAVTA 614
Query: 1425 CGRSTLEKAISFVNENEKWK------AKVIYGDTDRYTV 1457
GR +EK + V E + + A VIYGDTD V
Sbjct: 615 YGREMIEKTQATVLERYRVENGYSHTADVIYGDTDSVMV 653
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 33/159 (20%)
Query: 44 VPVIRVYGSTPAGQKTCLHIHRALPYLYVP----------CADIPVQL--------RQED 85
VP+I +YG T G +H+H LPY YVP C + L R
Sbjct: 9 VPIIHMYGLTREGHSVLVHLHGVLPYFYVPAPHAQFSEDDCESFRLALNRRCASHARGAK 68
Query: 86 DGYMHAISLALEKALKVKGSAGSKRQHVHECS-----LVRAKKG----GAVFD-----KS 131
+ + I++A+E+ + G KR+ + LV A +G G VFD ++
Sbjct: 69 ERKDYVIAVAVEQKESIMGYHADKRKPFLRITMAMPPLVPAARGILEAGLVFDGYPNGRT 128
Query: 132 LQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVPD 170
Q +ES+I F+L+F++D + G L L+ K+ VPD
Sbjct: 129 FQTYESNIAFVLRFMIDKKMTGAAWLELAANKY-EVVPD 166
>gi|300122468|emb|CBK23038.2| unnamed protein product [Blastocystis hominis]
Length = 850
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 140/522 (26%), Positives = 236/522 (45%), Gaps = 74/522 (14%)
Query: 946 QDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVA-LAFENDSDHAVEIYVLLYC 1004
+D S A ++ IE AE G P P D++ +A + E S +
Sbjct: 53 KDDFSLIAPFRILSFDIECCAEEGG--FPSPEKDAVITIANVVTEQGSTEPL-------F 103
Query: 1005 KSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
KS R IP V+ E + + + K L + D DI+ G++IQ + +L +RAA
Sbjct: 104 KSVFTLRGCASIPGVDVYCFEDEKDMLAAWSKYLVACDADIITGYNIQNFDIDYLRKRAA 163
Query: 1065 HLGIGLLNDISRTPLE-SKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRT 1123
L + + + R E ++ + G +N+
Sbjct: 164 TLKVKEFDLLGRVKGEFARCTTSTFSSAAYGTHENI------------------------ 199
Query: 1124 HASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGR 1183
++ GR++ +V + +R E KL+ YT+ V+ L + + + + + F +G
Sbjct: 200 ---DTNIAGRLIFDVMQFVRREYKLSSYTLNNVSSEFLGQTKEDVKYNQIKELF-NGDDV 255
Query: 1184 ARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLA 1243
R R Y V A L +++++L++I E+ARV G+ +LSRG Q +V SM+ R +
Sbjct: 256 TRQRIASYCVKDAWLPQQLLDKLNVIINQVEMARVTGVPINMLLSRGQQIKVLSMIHRKS 315
Query: 1244 HTQNYL--AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLC 1301
Y+ + N + A V+EP+ G+Y +P+ LDF SLYPS+MIA+N+C
Sbjct: 316 LQLGYIIPTLDRSNQSEKYEGAT-----VIEPKKGYYEEPIATLDFASLYPSIMIAHNIC 370
Query: 1302 FCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEE 1361
+ T + + E+ + S P G ++ R+GVLP +L E
Sbjct: 371 YSTLIPDSMEIDESRVERS-------------------PTGNRFLKKSEREGVLPIILRE 411
Query: 1362 ILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADS 1421
+L+ R + K+ + K + + + N RQLALK+ AN YG+T A G++PC ++ +
Sbjct: 412 LLAARKVAKKDMAK--ETDPLKKAVQNGRQLALKVSANSVYGFTGATV-GQLPCLAISRT 468
Query: 1422 IVQCGRSTLEKAISFVNENEKWK------AKVIYGDTDRYTV 1457
+ GR+ +E V E K A ++YGDTD V
Sbjct: 469 VTSYGRAMIEMTQRKVMERYCIKNGYEHDAMIVYGDTDSVMV 510
>gi|396485292|ref|XP_003842135.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
maculans JN3]
gi|312218711|emb|CBX98656.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
maculans JN3]
Length = 1115
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 234/513 (45%), Gaps = 70/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + PD D + NVV + D ++ L +
Sbjct: 309 LRILSFDIECAGRKGVFPDADIDPVIQIANVVT-RYGEDKPFVRNVFCL---------DT 358
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+ I +V E + + L DPD+++G++ +L +RA HL
Sbjct: 359 VSPIVATQVLSYEDEGEMLMKWRDFLEEVDPDVIIGYNTSNFDFPYLLDRAKHL------ 412
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
++R P S++ S++ + L G + G
Sbjct: 413 KLARFPYWSRLKTVQSKVDSSKFSSKQL--------------------GNRDTKTTNTNG 452
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ +L++ + +L YT+ +V L+ + + ++T+ F +G +R R Y
Sbjct: 453 RLQLDLLQLIQRDHQLRSYTLNSVCAHFLKEQKEDVHHSMITELF-NGDANSRRRLAVYC 511
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L ++++L + +E+ARV G+ F +L+RG Q R S L R A + L +
Sbjct: 512 LKDAYLPQRLLDKLMCLVNYTEMARVTGVPFNYLLARGQQVRFISQLFRKA-LDHQLIVP 570
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
+Q S E V+EP+ G+Y PV LDF SLYPS+M A+NLC+ T L K
Sbjct: 571 DLPNQGDSTDQYEG-ATVIEPKRGYYKQPVATLDFASLYPSIMQAHNLCYTTWLDKQTVE 629
Query: 1313 KENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
K L+ KDE ++ PNG M+ K RKG+L ++LEE+L R K+
Sbjct: 630 K---------------LKMKKDEDYIVTPNGDMFCTAKTRKGLLTQILEELLGAR---KK 671
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A ++LA + + N RQLALK+ AN YG T A +G++PC +A S GR +
Sbjct: 672 AKRELAVETDPFKKAVLNGRQLALKVSANSVYGLTGAT-NGKLPCLAIASSTTSFGRQMI 730
Query: 1431 EKAISFVNENEKWK------AKVIYGDTDRYTV 1457
EK + V A+VIYGDTD V
Sbjct: 731 EKTKAEVEAKYNIANGYSHDAEVIYGDTDSVMV 763
>gi|403413674|emb|CCM00374.1| predicted protein [Fibroporia radiculosa]
Length = 1060
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 227/507 (44%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+P D + +A ++ I + + +H +VG
Sbjct: 264 LRILSFDIECAGRKGIFPEPSIDPVIQIANMVTRQGENKPFIRNIFTLNTCAH---IVG- 319
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E + + + DPD+++G++ L +L +RA + +L
Sbjct: 320 --SQVLSFDDEGKMLDSWRAFVEEVDPDVVIGYNSSNFDLPYLMDRAKAIKANML----- 372
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P ++ ++ E + + E+ L GR+ +
Sbjct: 373 -PYLGRMNGVKAQTKETHFSSKAFGQRDSKETAL--------------------DGRLQI 411
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
+V + M+ E KL YT+ +V L + + V+T GP +R R Y + A
Sbjct: 412 DVLQYMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITDLQNGGP-ESRRRLAVYCLKDA 470
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L ++++L +E+ARV G+ F +LSRG +V S L R A+ Y I P
Sbjct: 471 YLPQRLIDKLMCFINYTEMARVTGVPFNYLLSRGQSIKVLSQLYRKANDDGY--IIPSLK 528
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T + K + +
Sbjct: 529 GEGSDEQYEG-ATVIEPMKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLVDKKVIDR--- 584
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
LH+++D+ + + PN +V RKG+LP +LE+++ R K +KK
Sbjct: 585 ---------LHLVKDV--DYIQTPNNDFFVTSSKRKGLLPTILEDLIGARKRAKVDLKK- 632
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK---- 1432
+ + + RQLALK+ AN YG+T A G++PC ++ S+ GR +EK
Sbjct: 633 -ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLPISSSVTAYGRQMIEKTKQE 690
Query: 1433 --AISFVNENEKWKAKVIYGDTDRYTV 1457
A V A VIYGDTD V
Sbjct: 691 VEAEYCVANGHSHDAHVIYGDTDSVMV 717
>gi|392574795|gb|EIW67930.1| hypothetical protein TREMEDRAFT_69477 [Tremella mesenterica DSM 1558]
Length = 1056
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 227/508 (44%), Gaps = 61/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L ++S +++ R + P+ D + +A + + + + +H +VG
Sbjct: 262 LRIMSFDIECAGRKGIFPEAHIDPVIQIAAMVTRQGESKPFVRNVFTLNTCAH---IVG- 317
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E L + K + DPD+++G++I L +L +RA L
Sbjct: 318 --SQVLEFKDEKQLLIEWRKFVQEVDPDMVIGYNIANFDLPYLLDRAKAL------KAQE 369
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
P S++ +E+ E + +G+ + +++ GR+ L
Sbjct: 370 FPFLSRLKGQKTEVKETHFSSKA--------------------YGQRDSKAVNMEGRLQL 409
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++M+ + KL YT+ AV L + + ++T+ +G +R R Y + A
Sbjct: 410 DMLQVMQRDYKLRSYTLNAVCAQFLGEQKEDVHHSIITE-LQNGTADSRRRLAVYCLKDA 468
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L ++++L +E+ARV G+ F +L+RG Q +V S L R + Y I P
Sbjct: 469 YLPQRLLDKLMSFVNYTEMARVTGVPFNYLLTRGQQIKVISQLFRASADSGY--IIPAMK 526
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L K
Sbjct: 527 SEGSDEQYEG-ATVIEPTKGYYDVPIATLDFASLYPSIMMAHNLCYTTLLDK-------- 577
Query: 1317 LGVSSFRPDLHVLRDLKDELLI-PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ L+ ++ E + PN + K RKG+LP +L +L R KQ +K
Sbjct: 578 -------GTIERLKLVEGEDYVHTPNNDYFATTKRRKGLLPTVLRNLLDARKRAKQDLK- 629
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE---- 1431
+ + RQLALK+ AN YG+T A G++PC ++ S+ GR +E
Sbjct: 630 -VEKDPFRRAVLDGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAFGRQMIEFTKQ 687
Query: 1432 --KAISFVNENEKWKAKVIYGDTDRYTV 1457
+A V + AKVIYGDTD V
Sbjct: 688 QVEAEFCVANGYENDAKVIYGDTDSVMV 715
>gi|401427880|ref|XP_003878423.1| putative DNA polymerase delta catalytic subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494671|emb|CBZ29973.1| putative DNA polymerase delta catalytic subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1032
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 237/506 (46%), Gaps = 67/506 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LSI+++ + R L P+P +D + +A +H VE +SE +++ +
Sbjct: 239 ILSIDIECQGRKGLFPEPEHDPVIQIA-------NHCVE----YGHESEPLTKTIFTLKS 287
Query: 1019 C------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
C +V E + + + + DPDIL G++I +L RAA L
Sbjct: 288 CAPIAGAQVLSYETEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLNRAAALKAS--- 344
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLHVG 1131
++ ER + A+D + + G + L +
Sbjct: 345 --------DAFHYWGRQVHERTV---------------ARDKKFQSKQMGNREYTELTLE 381
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GRI+++ +++ + KL Y++ +V++ L + + +++ G R R Y
Sbjct: 382 GRIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHHSIISD-LQHGDEETRRRLAVY 440
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L ++++++L I E+ARV G+ +L RG Q +V SMLLR A + L +
Sbjct: 441 CLKDAFLPVKLLDRLMCIVNNVEMARVTGVPVGWLLERGQQIKVFSMLLRKAQKKK-LVV 499
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ S E V++P GFY PV LDF SLYPS++IA+NLC+ T + P
Sbjct: 500 PTVEYTGGSDRGYEG-ATVIDPIKGFYNCPVATLDFASLYPSIIIAHNLCYSTL---VRP 555
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ + P+ D L P ++V +V G+LP +L+++L+ R +
Sbjct: 556 AD------ARLYPE--------DSLDRSPTSDIFVKKEVFPGILPEVLQDLLAARKHAR- 600
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
A+ K P + +++ N RQLALK+ AN YG+T A G++PC E++ S+ GR ++
Sbjct: 601 AMMKDVPMNSLEYKVLNGRQLALKVSANSVYGFTGAQV-GKLPCLEISASVTAYGRQMID 659
Query: 1432 KAISFVNENEKWKAKVIYGDTDRYTV 1457
+ + V E A+V+YGDTD V
Sbjct: 660 RTKNLVEELYP-GARVLYGDTDSVMV 684
>gi|387593494|gb|EIJ88518.1| hypothetical protein NEQG_01208 [Nematocida parisii ERTm3]
Length = 620
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 226/484 (46%), Gaps = 51/484 (10%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+ +LS++++ + P P++D + N VA+ V I +L+C ++
Sbjct: 183 IKILSLDIECIGEDNKFPTPQHDPVVQIGNAVAVY-----PSPVIIEKVLFCTRPTNP-- 235
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
IP +F E + + + + + + +PD+L G++I + +L RA LG+
Sbjct: 236 ---IPGVTIFSFMDEKEMLTAWSQWVSALNPDVLTGYNITQFDMPYLLNRAKALGLTKFK 292
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
SRT ++ G + N A+ + E + G T + L V G
Sbjct: 293 YFSRTDEPAETTQGLFKQDSNNSNKNGDAKNSTSN---------EQKSGFTAPALLVVPG 343
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+V ++ +++ E KL+ Y++ AV+ L + + + + K +G R R Y
Sbjct: 344 RLVFDMLDIVKKEFKLHSYSLNAVSSVFLGEQKEDVHYTQI-KPLYNGTDETRKRLGVYC 402
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY-LAI 1251
+ L + IM ++ ELARV G+ +++RG RV S LLR A NY L +
Sbjct: 403 LKDTYLPIRIMYTKNLFINYCELARVTGVPVEFLVNRGQGIRVLSQLLRQAKKYNYILPV 462
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
G + VMEP GFY++PVVVLD+ SLYPS+++AYNLC+ T L
Sbjct: 463 IIGAEETYEGG------YVMEPNRGFYSNPVVVLDYASLYPSIIMAYNLCYTTLL----- 511
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
SKE + KD+ P G ++ + + G+LP +L +L R V+
Sbjct: 512 SKEQVAHMD------------KDDYTESPTGDYFLRREKKPGLLPVILTSLLEGRKAVRA 559
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K + L NARQLALK+ AN YG+T A +G +PC ++ S+ GR L+
Sbjct: 560 ELKNTKDPE--LKASLNARQLALKVSANSVYGFTGASKTG-LPCIPISRSVTGFGREILK 616
Query: 1432 KAIS 1435
K S
Sbjct: 617 KQKS 620
>gi|452845568|gb|EME47501.1| hypothetical protein DOTSEDRAFT_50888 [Dothistroma septosporum NZE10]
Length = 1104
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 145/515 (28%), Positives = 235/515 (45%), Gaps = 75/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y + + R++ +
Sbjct: 306 LRVLSFDIECAGRKGVFPEANVDPVIQIANV------------VTRYGEEKPFVRNVFCM 353
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSF-------DPDILMGWDIQGGSLGFLAERAAHLGIG 1069
C + V + +I F K+L ++ DPD+++G++I +L +RAA L +G
Sbjct: 354 DTCSLIV-NTQIFEFGAEEKMLMAWRDFVEEVDPDVIIGYNISNFDFPYLLDRAAFLKVG 412
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
++R K A D+ S + + G +
Sbjct: 413 RFPFLTRLR-NVKSMAKDTNFSSK-------------------------QMGNRDTKATN 446
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
GR+ L++ +L++ + +L YT+ +V+ L + + ++T+ + P +R R
Sbjct: 447 TNGRLQLDLLQLIQRDYQLRSYTLNSVSAHFLSEQKEDVHHTMITELYNGTP-ESRRRLA 505
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++L + +E+ARV G+ F +LS+G Q + S L R A Q
Sbjct: 506 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSKGQQIKFISQLFRKALEQQL- 564
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ P S E V+EP G+Y PV LDF SLYPS++ A+NLC+ T L K
Sbjct: 565 -VVPDLKSEGSDEQYEG-ATVIEPTRGYYDVPVATLDFASLYPSIIQAHNLCYTTLLNK- 621
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
N + + D D+ ++ PNG ++ KVRKG+L ++LEE+L R
Sbjct: 622 -----NAVEKMQLKKD--------DDYIVTPNGDLFATTKVRKGLLSQILEELLGAR--- 665
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 666 KRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLAIASSTTAYGRQ 724
Query: 1429 TLEKAIS------FVNENEKWKAKVIYGDTDRYTV 1457
+EK V A+VIYGDTD V
Sbjct: 725 MIEKTKEEVEGKYTVANGYSHDAQVIYGDTDSVMV 759
>gi|145342057|ref|XP_001416112.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576336|gb|ABO94404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 982
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 227/509 (44%), Gaps = 71/509 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSLVG 1015
+LS++++ R PD + D I + L E SD + ++ L C +VG
Sbjct: 185 ILSVDIECAGRKGHFPDAQLDPVIQIATLVTEQGSDKPIIRAVWTLDTCAP------IVG 238
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
V E L ++ L DPD+L+G++I +L ERA LG+
Sbjct: 239 ---ADVLSFKDERELLRNWGNFLRGCDPDLLIGYNIVNFDFPYLLERAEKLGVADFPYWG 295
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R + +K+ D+ S + +G + + GR+
Sbjct: 296 RL-IGTKVRMRDTVFSSKA-------------------------YGTHESKEISCEGRVQ 329
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ R ++ + KL+ Y++ AV+ L + + + +++ +G R R Y +
Sbjct: 330 FDMLRAIQRDYKLSSYSLNAVSAHFLGEQKEDVHYSAISE-LQNGTPETRRRLAVYCLKD 388
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-----A 1250
A L ++++L + E+ARV G+ +L+RG +V S LLR A +N L
Sbjct: 389 AYLPQRLLDKLMYMYNYIEMARVTGVPLNYLLTRGQSIKVMSQLLRKARQRNMLIPHHVK 448
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
GN Q A E V++ ++G+Y P+ LDF SLYPS+M+A+NLC+ T + K
Sbjct: 449 QGGGNVQAEGGVAYEG-ATVLDAKAGYYEMPIATLDFASLYPSIMMAHNLCYSTLVPKDK 507
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
K N D+ P+G +V KG+LP +LEE+L R K
Sbjct: 508 VGKLNP-----------------DDYGTSPSGDTFVKASKVKGILPEILEELLGARKRAK 550
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+KK Q + + RQLALK+ AN YG+T A G++PC E++ S GR+ +
Sbjct: 551 ADLKKATDPLQ--KAVLDGRQLALKVSANSVYGFTGA-MVGQLPCLEISSSTTAYGRTMI 607
Query: 1431 EKAISFVNENEK------WKAKVIYGDTD 1453
+ V E + A+VIYGDTD
Sbjct: 608 DHTKKMVEEKYRTVNGYTGNAEVIYGDTD 636
>gi|154344040|ref|XP_001567964.1| putative DNA polymerase delta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134065298|emb|CAM40726.1| putative DNA polymerase delta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 1032
Score = 167 bits (422), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 232/502 (46%), Gaps = 59/502 (11%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSLVG 1015
+LSI+++ + R L P+P +D + +A + + ++S+ + L +S
Sbjct: 239 ILSIDIECQGRKGLFPEPEHDPVIQIANYCVEYGHESEPLTKTIFTL--------KSCAP 290
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I +VF E + + + + DPDIL G++I +L RA L
Sbjct: 291 IAGAQVFSYETEADMLLAWATFMKALDPDILTGYNICNFDFPYLLNRATALKASDAFHYW 350
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
+ + AA D + + + G + L + GRI+
Sbjct: 351 GRQVHERTAARDKKFQSK-------------------------QMGNREYTELTLEGRII 385
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ +++ + KL Y++ +V++ L + + +++ G R R Y +
Sbjct: 386 MDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHHSIISD-LQQGDEETRRRLAVYCLKD 444
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L ++++++L I E+ARV G+ +L RG Q +V SMLLR A + L +
Sbjct: 445 ALLPVKLLDRLMCIVNNVEMARVTGVPVGWLLERGQQIKVFSMLLRKAQKKK-LVVPTVE 503
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ S E V++P GFY PV LDF SLYPS++IA+NLC+ T + P+
Sbjct: 504 YTGGSDRGYEG-ATVIDPIKGFYNCPVATLDFASLYPSIIIAHNLCYSTL---VRPAD-- 557
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ P+ D L P ++V V G+LP +L+++L+ R + A+ K
Sbjct: 558 ----ARLYPE--------DALDRSPTSDVFVKKDVFPGILPEVLQDLLAARKHAR-AMMK 604
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
P + +++ N RQLALK+ AN YG+T A G++PC E++ S+ GR ++K +
Sbjct: 605 DVPMHSLEYKVLNGRQLALKVSANSVYGFTGAQV-GKLPCLEISASVTAYGRQMIDKTKN 663
Query: 1436 FVNENEKWKAKVIYGDTDRYTV 1457
V E +V+YGDTD V
Sbjct: 664 LV-EQLYPGTRVLYGDTDSVMV 684
>gi|348666766|gb|EGZ06593.1| hypothetical protein PHYSODRAFT_532354 [Phytophthora sojae]
Length = 1050
Score = 167 bits (422), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 224/506 (44%), Gaps = 66/506 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHA---VEIYVLLYCKSESHQRSL 1013
L +LS +++ R P+ D + +A + H ++VL CK +
Sbjct: 252 LRILSFDIECMGRKGHFPEAEQDPVIQIANVVQEQGSHTPIIRNVFVLDTCKP------I 305
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG V KE + + + + DPDI+ G++I + +L R L + N
Sbjct: 306 VG---AHVMEFEKEGEMLEKWARFVQEVDPDIITGYNIANFDIPYLLNRGKALKLQNYNL 362
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R L +K A + K ++G++ + GR
Sbjct: 363 LGR--LANKAA------------------------FMEKKTFSSAQYGKSENVKTTIHGR 396
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ +MR +L+ Y++ AV+ L ++ +P +++ G R+R Y +
Sbjct: 397 CMFDLLPIMRRSQQLSSYSLNAVSAAFLGQQKEDVPHGIISD-LQRGTDDDRHRLAVYCL 455
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L ++++L + E+ARV G+ ++ RG Q +V SMLLR + + +
Sbjct: 456 KDAYLPLRLLDKLSYLVNFIEMARVSGVPIDFLIERGQQIKVFSMLLRKCKDASLVVPTL 515
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
Q E V+EP+ FY+ P+ LDF SLYPS+M A+NLC+ T + P
Sbjct: 516 PRSQNNEDAGYEG-ATVIEPKKAFYSVPIATLDFASLYPSIMQAFNLCYSTLVA---PGD 571
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+ L + P+G ++V K +KG+LP +LEE+L+ R K +
Sbjct: 572 VDKLAPGDYERS--------------PSGDIFVTSKKKKGILPLILEEVLAARKQAKWDM 617
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
A + + + N RQLALK+ AN YG+T A G+MPC +A S GR L +
Sbjct: 618 N--AATDPMEKAVQNGRQLALKVSANSVYGFTGA-IVGQMPCIPIASSTTAYGRQLLFRT 674
Query: 1434 ------ISFVNENEKWKAKVIYGDTD 1453
I + K A+V+YGDTD
Sbjct: 675 REEVERIYTIANGYKADAQVVYGDTD 700
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 47/194 (24%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIP-----GYDICYSSLQGGKVNEVPVIRVYGSTPA 55
M P ++ + + + ID Y PP+P G ++ GG +IR+YG +
Sbjct: 16 MVTVDPSADSVAFQWIDIDMYDGPPLPANPKKGAEVPGLKASGGASQNAAIIRLYGVSME 75
Query: 56 GQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHE 115
G +H+H LPY Y C D D+ + AL+ A+ + S V
Sbjct: 76 GHSVLMHVHGVLPYFYCVCPD------NFDESRCGEVRAALDAAVSQRDRDSSSAARVVG 129
Query: 116 CSLVRAKKG--GAVFD----------------------------------KSLQPHESHI 139
+VR K G FD ++ Q +ES++
Sbjct: 130 VQVVRDKMSIYGYQFDRYTTLFKIYLSMPSYVPKLRSALEGGLTLPGCDFRNYQTYESNV 189
Query: 140 PFLLQFLVDYNLYG 153
PF+L+F++D + G
Sbjct: 190 PFILRFMIDEGIRG 203
>gi|378755079|gb|EHY65106.1| hypothetical protein NERG_01552 [Nematocida sp. 1 ERTm2]
Length = 1020
Score = 167 bits (422), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 232/527 (44%), Gaps = 58/527 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+ +LS++++ + P P D + + A + + + +L+C ++ I
Sbjct: 183 IKILSLDIECIGENNKFPIPTRDPVVQIGNAVAVYPNPEI-VEKVLFCTKTTNP-----I 236
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
P +F + E + + + + + +PD+L G++I + +L +RA+ LG+ SR
Sbjct: 237 PGASIFSFNDEKEMLTAWSQWVSVLNPDVLTGYNITQFDMPYLLDRASTLGLPDFKYFSR 296
Query: 1077 T--PLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
T P+ + + + D G T + L V GRI
Sbjct: 297 TKEPVHMNKLPQTNNTGNNSGNNGNSGNNTGNNNGKEGDDKSGSSGGFTAPATLVVPGRI 356
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
V ++ +++ E L+ Y++ +V+ L + + + + + +G R R Y +
Sbjct: 357 VFDMLDIVKKEFNLHSYSLNSVSSVFLGEQKEDVHYTQILALY-NGTDETRKRLGVYCLK 415
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
L + IM ++ ELARV G+ F +++RG RV S LLR A NY+
Sbjct: 416 DTYLPIRIMYTKNLFINYCELARVTGVPFEYLVNRGQGIRVLSQLLRQAKAYNYIL---- 471
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
V Q VMEP GFY++PVVVLD+ SLYPS+++AYN+C+ T L K SK
Sbjct: 472 -PVVIGQSETYEGGYVMEPNKGFYSNPVVVLDYASLYPSIIMAYNMCYTTLLSKEQASKM 530
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
+ K E P G ++ + + G+LP +L +L R V+ +K
Sbjct: 531 D-----------------KSEYTESPTGDCFLRKEKKPGILPVILTGLLEGRKAVRAELK 573
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
+ + L NARQLALK+ AN YG+T A +G +PC ++ S+ GR L+K
Sbjct: 574 NIKDPE--LKASLNARQLALKVSANSVYGFTGAARTG-LPCIPISRSVTGFGREILKKTK 630
Query: 1435 SFV----NENEK--------------------WKAKVIYGDTDRYTV 1457
V N+ EK W V YGDTD V
Sbjct: 631 ELVENEYNKGEKTEGSDEQENNNSQKEGNRRTWNLFVAYGDTDSVMV 677
>gi|449301894|gb|EMC97903.1| hypothetical protein BAUCODRAFT_31911 [Baudoinia compniacensis UAMH
10762]
Length = 1107
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 235/515 (45%), Gaps = 75/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A V Y + + R++ +
Sbjct: 309 LRVLSFDIECAGRKGVFPEANIDPVIQIANV------------VTRYGEEKPFVRNVFCM 356
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSF-------DPDILMGWDIQGGSLGFLAERAAHLGIG 1069
C + V + +I F K+L ++ DPD+++G++I +L +RAAHL +
Sbjct: 357 DTCSLIV-NTQIFEFGSEEKMLMAWRDFVQEVDPDVIIGYNICNFDFPYLLDRAAHLKVA 415
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
SR K A D+ S + + G +
Sbjct: 416 PFPFWSRLK-NVKSVARDTNFSSK-------------------------QMGNRDTKATN 449
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
GR+ L++ +L++ + +L YT+ +V L + + ++T+ + P +R R
Sbjct: 450 TNGRLQLDLLQLVQRDYQLRSYTLNSVCAHFLNEQKEDVHHTMITELYNGTP-ESRRRLA 508
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L +M++L + +E+ARV G+ F +LS+G Q + S L R A Q
Sbjct: 509 VYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSKGQQIKFLSQLYRKALEQQL- 567
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ P S E V+EP G+Y PV LDF SLYPS+M A+NLC+ T L K
Sbjct: 568 -VIPSLKSEGSDEQYEG-ATVIEPTRGYYDVPVATLDFASLYPSIMQAHNLCYTTLLNKT 625
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
K L + +D ++ + PNG ++ KVRKG+L ++LEE+LS R
Sbjct: 626 AIEK------------LSLKKD--EDYIQTPNGDLFCTAKVRKGLLSQILEELLSAR--- 668
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+A K+LA + + N RQLALK+ AN YG T A G++PC +A S GR
Sbjct: 669 KRAKKELAVETDTFRKAVLNGRQLALKVSANSVYGLTGATV-GKLPCLAIASSTTSYGRQ 727
Query: 1429 TLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+EK A + A+VIYGDTD V
Sbjct: 728 MIEKTKEEVEARYTIANGYTHDAQVIYGDTDSVMV 762
>gi|302687116|ref|XP_003033238.1| hypothetical protein SCHCODRAFT_81939 [Schizophyllum commune H4-8]
gi|300106932|gb|EFI98335.1| hypothetical protein SCHCODRAFT_81939 [Schizophyllum commune H4-8]
Length = 1072
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 235/507 (46%), Gaps = 59/507 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ + D + +A + + + + +H +VG
Sbjct: 275 LRILSFDIECAGRQGIFPEAKVDPVIQIANMVTRQGEGQPFVRNVFTLNTCAH---IVG- 330
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E + + + DPD+++G++I +L +RA L + + R
Sbjct: 331 --SQVLSYKNEREMLMAWRDFVEEVDPDVVIGYNISNFDFPYLMDRAEALKLTEFPFLGR 388
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
L++K + VV ++ + A +G+ + + GR+ L
Sbjct: 389 --LKNK-------------------QTVVKDTHFSSKA-----YGQRDSKETPLDGRLQL 422
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ + M+ E KL Y++ +V L + + ++T+ +G +R R Y + A
Sbjct: 423 DILQFMQREHKLRSYSLNSVCAHFLGEQKEDVHHSIITE-LQNGTDESRRRLAVYCLKDA 481
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L ++++L E+ARV G+ F +L+RG +V S L R A++ NY I P
Sbjct: 482 YLPQRLLDKLMCFVNYIEMARVTGVPFNYLLARGQSIKVLSQLFRKANSDNY--IIPALK 539
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP+ G+Y P+ LDF SLYPS+M+A+NLC+ T + +
Sbjct: 540 GEGSDEQYEG-ATVIEPKKGYYDAPIATLDFSSLYPSIMMAHNLCYTTLVDR-------- 590
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
S L +++D+ + + PN +V RKG+LP +LE+++S R K +KK
Sbjct: 591 ----STIERLGLVKDV--DYIQTPNNDFFVKATKRKGLLPTVLEDLISARKRAKADLKK- 643
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
+ + + RQLALK+ AN YG+T A G++PC ++ S+ GR +EK
Sbjct: 644 -ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLAISSSVTSYGRQMIEKTKQE 701
Query: 1437 VNENE------KWKAKVIYGDTDRYTV 1457
V K A+VIYGDTD V
Sbjct: 702 VESQYCIANGFKHDAEVIYGDTDSVMV 728
>gi|406862660|gb|EKD15710.1| DNA polymerase family B [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1103
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 234/508 (46%), Gaps = 61/508 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ YD + +A + + + + S I
Sbjct: 305 LRILSFDIECAGRKGIFPEANYDPVIQIANVVTRYGEKKPFVRNVFCLDNTSP------I 358
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+ ++F S E + + + + DPDI++G++I +L +RA HL + + +R
Sbjct: 359 VNTQLFEFSSEEKMLTKWRDFMEEVDPDIIIGYNICNFDFPYLLDRAKHLKVKDFDKWTR 418
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
++ AA ++ S + + G + GR+ L
Sbjct: 419 LN-SARSAAKETNFSSK-------------------------QMGNRDTKATNTNGRLQL 452
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ + +L YT+ +V L + + ++T+ F P +R R Y + A
Sbjct: 453 DLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTP-ESRRRLAVYCLKDA 511
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L +M++L + +E++RV G+ F +LSRG Q + S L R A Q + P
Sbjct: 512 YLPQRLMDKLSCLENYTEMSRVTGVPFNYLLSRGQQVKFVSQLFRKALEQKL--VIPNLR 569
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
AS E V+EP G+Y P+ LDF SLYPS++ A+NLC+ T L K K
Sbjct: 570 TDASDEQYEG-ATVIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTTLLNKASVEK--- 625
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
L +++D ++ ++ PN M+ K RKG+L ++LEE+L+ R KQA ++L
Sbjct: 626 ---------LGLVKD--EDYIVTPNNDMFCTTKQRKGLLTQILEELLTAR---KQAKREL 671
Query: 1377 APSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
A + + N RQLALK+ AN YG T A G++PC +A S GR +EK
Sbjct: 672 AVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLAIASSTTSYGRQMIEKTKE 730
Query: 1436 F------VNENEKWKAKVIYGDTDRYTV 1457
+ A+VIYGDTD V
Sbjct: 731 EVEKKYTIANGYSHDAQVIYGDTDSVMV 758
>gi|330793430|ref|XP_003284787.1| DNA polymerase delta catalytic subunit [Dictyostelium purpureum]
gi|325085281|gb|EGC38691.1| DNA polymerase delta catalytic subunit [Dictyostelium purpureum]
Length = 1026
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 235/506 (46%), Gaps = 63/506 (12%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LS +++ R P+P D + +A +N + I + K S S+VG
Sbjct: 238 ILSFDIECAGRKGFFPEPEKDPVIQIANIVKNQGESEPFIKNIFTLKGCS---SIVG--- 291
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP 1078
V E + + K L DPDI++G++I L +L RA L I
Sbjct: 292 AHVISHKCEKDMLKEWRKFLIKVDPDIIIGYNIANFDLPYLISRARTL------KIPEFA 345
Query: 1079 LESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNV 1138
L S+I S+I + + L G + + + GR ++
Sbjct: 346 LLSRIKTTISKIKSTHFSSSNL--------------------GTRESKEVSMPGRTQFDL 385
Query: 1139 WRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKL 1198
+ ++ + KL+ Y++ V+ L+ + + F +++ +G R R Y + A L
Sbjct: 386 MQAIQRDHKLSSYSLNNVSAHFLKEQKEDVHFSIISD-LQNGTDDDRRRLAVYCIKDAAL 444
Query: 1199 NLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
++++++L ++ +E+ARV G+ +L RG +V S L R A +++L + ++V
Sbjct: 445 PMKLLDKLMLLINYTEMARVTGVPLSYLLGRGEGVKVLSQLYRKAMVEDFLIPT---YKV 501
Query: 1259 ASQPAMECL-PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTL 1317
+ + +V+EP+ FY P+ LDF SLYPS+M+A+NLC+ T +LP++E
Sbjct: 502 TGKAGEKFKGAVVIEPKCAFYDTPIATLDFTSLYPSIMMAHNLCYST----LLPAEEAK- 556
Query: 1318 GVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA 1377
+ DE + P+G ++ P +KG+LPR+LEE+LS R K+ +K
Sbjct: 557 ------------KLPADEYTVTPSGDHFILPHKKKGLLPRILEELLSARKNAKELLKN-- 602
Query: 1378 PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
+ + RQLALK+ AN YG+T A G++PC E++ S+ GR L+ V
Sbjct: 603 EKDPFKKAVLDGRQLALKISANSVYGFTGARV-GKLPCVEISRSVTSFGREMLDTTKKIV 661
Query: 1438 NEN------EKWKAKVIYGDTDRYTV 1457
E A VIYGDTD V
Sbjct: 662 EERYTIANGYNHDAVVIYGDTDSVMV 687
>gi|398021685|ref|XP_003864005.1| DNA polymerase delta catalytic subunit, putative [Leishmania
donovani]
gi|322502239|emb|CBZ37322.1| DNA polymerase delta catalytic subunit, putative [Leishmania
donovani]
Length = 1032
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 238/509 (46%), Gaps = 68/509 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LSI+++ + R L P+P +D + +A +H VE +SE +++ +
Sbjct: 239 ILSIDIECQGRKGLFPEPEHDPVIQIA-------NHCVE----YGHESEPLTKTIFTLKS 287
Query: 1019 C------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
C +V E + + + + DPDIL G++I +L RA L
Sbjct: 288 CAPIAGAQVLSYETEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLNRATALKAS--- 344
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLHVG 1131
++ ER + A+D + + G + L +
Sbjct: 345 --------DAFHYWGRQVHERTV---------------ARDKKFQSKQMGNREYTELTLE 381
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GRI+++ +++ + KL Y++ +V++ L + + +++ G R R Y
Sbjct: 382 GRIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHHSIISD-LQHGDEETRRRLAVY 440
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L ++++++L I E+ARV G+ +L RG Q +V SMLLR A + L +
Sbjct: 441 CLKDAFLPVKLLDRLMCIVNNVEMARVTGVPVGWLLERGQQIKVFSMLLRKAQKKK-LVV 499
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ S E V++P GFY PV LDF SLYPS++IA+NLC+ T + P
Sbjct: 500 PTVEYTGGSDRGYEG-ATVIDPIKGFYNCPVATLDFASLYPSIIIAHNLCYSTL---VRP 555
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ + P+ D L P ++V +V G+LP +L+++L+ R +
Sbjct: 556 AD------ARLYPE--------DALDRSPTSDVFVKKEVFPGILPEVLQDLLAARKHAR- 600
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
A+ K P + +++ N RQLALK+ AN YG+T A G++PC E++ S+ GR ++
Sbjct: 601 AMMKDVPMNSLEYKVLNGRQLALKVSANSVYGFTGAQV-GKLPCLEISASVTAYGRQMID 659
Query: 1432 KAISFVNENEKWKAKVIYGDTDRYTV-CI 1459
+ + V E A+V+YGDTD V C+
Sbjct: 660 RTKNLVEELYP-GARVLYGDTDSVMVKCV 687
>gi|301090780|ref|XP_002895592.1| DNA polymerase delta catalytic subunit [Phytophthora infestans T30-4]
gi|262097769|gb|EEY55821.1| DNA polymerase delta catalytic subunit [Phytophthora infestans T30-4]
Length = 1609
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 224/516 (43%), Gaps = 76/516 (14%)
Query: 952 GAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHA---VEIYVLLYCKSES 1008
G +LS +++ R P+ D + +A + H ++VL CK
Sbjct: 247 GKVAPFRILSFDIECMGRKGHFPEAEQDPVIQIANVVQEQGSHTPIIRNVFVLDTCKP-- 304
Query: 1009 HQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI 1068
+VG V KE + + + + DPDI+ G++I + ++ R L +
Sbjct: 305 ----IVG---AHVMEFEKEGDMLESWARFVQEVDPDIITGYNIANFDIPYVLNRGKALKL 357
Query: 1069 GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGL 1128
N+L + + + K ++G++
Sbjct: 358 Q--------------------------NYNLLGRLANSAAYMEKKTFSSAQYGKSENVKT 391
Query: 1129 HVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRC 1188
+ GR + ++ +MR L+ Y++ AV+ L ++ +P +++ G R+R
Sbjct: 392 TIHGRCMFDLLPIMRRSQNLSSYSLNAVSAAFLGQQKEDVPHGIISD-LQRGTDDDRHRL 450
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
Y + A L L ++++L + E+ARV G+ ++ RG Q +V SMLLR +
Sbjct: 451 AVYCLKDAYLPLRLLDKLSYLVNFIEMARVSGVPIDFLIERGQQIKVFSMLLRKCKDASL 510
Query: 1249 ----LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
L S N V + A V+EP+ FY+ P+ LDF SLYPS+M A+NLC+ T
Sbjct: 511 VVPTLPRSQNNEDVGYEGAT-----VIEPKKAFYSVPIATLDFASLYPSIMQAFNLCYST 565
Query: 1305 CLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILS 1364
+ P + L + P+G ++V K +KG+LP +LEE+L+
Sbjct: 566 LVA---PGDVDKLAPGDYEKS--------------PSGDIFVTSKKKKGILPLILEEVLA 608
Query: 1365 TRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
R K+ + +I + N RQLALK+ AN YG+T A G+MPC +A S
Sbjct: 609 ARKQAKRDMNAATDPMEIA--VQNGRQLALKVSANSVYGFTGA-IVGQMPCIPIASSTTA 665
Query: 1425 CGRSTL-------EKAISFVNENEKWKAKVIYGDTD 1453
GR L E+ + N K A+V+YGDTD
Sbjct: 666 YGRQLLFRTREEVEREYTIAN-GYKADAQVVYGDTD 700
Score = 53.9 bits (128), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 73/199 (36%), Gaps = 57/199 (28%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPP----------IPGYDICYSSLQGGKVNEVPVIRVY 50
+A P ++ S + + ID Y PP +PG S Q + IR+Y
Sbjct: 16 LAPIDPSADSVSFQWIDIDMYDGPPLKMNPKKGAPVPGLKASDDSSQNAAI-----IRLY 70
Query: 51 GSTPAGQKTCLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKR 110
G T G +H+H LPY Y C D D+ + AL+ A+ + S
Sbjct: 71 GVTMEGHSVLMHVHGVLPYFYAVCPD------NFDESKCGEVRAALDAAVSQRDRDSSSN 124
Query: 111 QHVHECSLVRAKKG--GAVFD----------------------------------KSLQP 134
V +VR K G FD ++ Q
Sbjct: 125 ARVVGVQVVRDKMSIYGYQFDRRTTLFKIFLSMPSYVPKLRSALEGGLTLPGCDFRNYQT 184
Query: 135 HESHIPFLLQFLVDYNLYG 153
+ES++PF+L+F++D + G
Sbjct: 185 YESNVPFILRFMIDEEIRG 203
>gi|146097987|ref|XP_001468284.1| putative DNA polymerase delta catalytic subunit [Leishmania infantum
JPCM5]
gi|134072651|emb|CAM71367.1| putative DNA polymerase delta catalytic subunit [Leishmania infantum
JPCM5]
Length = 1032
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 238/509 (46%), Gaps = 68/509 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LSI+++ + R L P+P +D + +A +H VE +SE +++ +
Sbjct: 239 ILSIDIECQGRKGLFPEPEHDPVIQIA-------NHCVE----YGHESEPLTKTIFTLKS 287
Query: 1019 C------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
C +V E + + + + DPDIL G++I +L RA L
Sbjct: 288 CAPIAGAQVLSYETEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLNRATALKAS--- 344
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLHVG 1131
++ ER + A+D + + G + L +
Sbjct: 345 --------DAFHYWGRQVHERTV---------------ARDKKFQSKQMGNREYTELTLE 381
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GRI+++ +++ + KL Y++ +V++ L + + +++ G R R Y
Sbjct: 382 GRIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHHSIISD-LQHGDEETRRRLAVY 440
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L ++++++L I E+ARV G+ +L RG Q +V SMLLR A + L +
Sbjct: 441 CLKDAFLPVKLLDRLMCIVNNVEMARVTGVPVGWLLERGQQIKVFSMLLRKAQKKK-LVV 499
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ S E V++P GFY PV LDF SLYPS++IA+NLC+ T + P
Sbjct: 500 PTVEYTGGSDRGYEG-ATVIDPIKGFYNCPVATLDFASLYPSIIIAHNLCYSTL---VRP 555
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ + P+ D L P ++V +V G+LP +L+++L+ R +
Sbjct: 556 AD------ARLYPE--------DALDRSPTSDVFVKKEVFPGILPEVLQDLLAARKHAR- 600
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
A+ K P + +++ N RQLALK+ AN YG+T A G++PC E++ S+ GR ++
Sbjct: 601 AMMKDVPMNSLEYKVLNGRQLALKVSANSVYGFTGAQV-GKLPCLEISASVTAYGRQMID 659
Query: 1432 KAISFVNENEKWKAKVIYGDTDRYTV-CI 1459
+ + V E A+V+YGDTD V C+
Sbjct: 660 RTKNLVEELYP-GARVLYGDTDSVMVKCV 687
>gi|412988964|emb|CCO15555.1| DNA polymerase delta catalytic subunit [Bathycoccus prasinos]
Length = 1114
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 233/514 (45%), Gaps = 80/514 (15%)
Query: 959 LLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAV--EIYVLLYCKSESHQRSLVG 1015
+LS++++ R PD D I + L E SD + I+ L C +VG
Sbjct: 315 ILSVDIECAGRKGFFPDAEQDPVIQIATLVTEQGSDSPIIKAIWTLDTCAP------IVG 368
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
+ K F +E L + K + + DPD+L+G++I +L +RA LG+
Sbjct: 369 -AEVKSFRDERE--LLRDWGKFMRAVDPDMLIGYNIVNFDFPYLIKRAQTLGVQDFPYWG 425
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVGGRI 1134
R ++ + L KD + +G + + + GR+
Sbjct: 426 R---------------------------IIGKQLTIKDTTFSSKAYGTRESKEITIEGRV 458
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
++ + ++ + KL+ Y++ +V+ L + + +++ +G R R Y +
Sbjct: 459 QFDMLQAIQRDYKLSSYSLNSVSAHFLGEQKEDVHHSAISE-LQAGTAETRRRLAVYCLK 517
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
A L ++++L E++RV G+ +L+RG +V S LLR A + I P
Sbjct: 518 DAYLPQRLLDKLMYTYNYIEMSRVTGVPLSFLLARGQSIKVMSQLLRKARQRGL--IIPA 575
Query: 1255 --------NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
N Q+ + A E V++ ++G+Y P+ LDF SLYPS+M+A+NLC+CT +
Sbjct: 576 RRDRGNGPNAQLEGEVAYEG-ATVLDAKAGYYELPIATLDFASLYPSIMMAHNLCYCTLV 634
Query: 1307 GKILPSKENTLGVSSFRPDLHVLRDLKDELLI-PPNGVMYVPPKVRKGVLPRLLEEILST 1365
+ H + DL E P G ++V KG+LP +LEE+LS
Sbjct: 635 KQ------------------HDVADLPPEAYTKAPTGDVFVKSTQFKGILPEILEELLSA 676
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R KQ +KK + + + + RQLALK+ AN YG+T A G++PC E++ S
Sbjct: 677 RKRAKQDLKK--ATDPLERAVLDGRQLALKISANSVYGFTGATV-GQLPCLEISASTTAY 733
Query: 1426 GRSTLEKAISFVNEN------EKWKAKVIYGDTD 1453
GR ++ V E + A+VIYGDTD
Sbjct: 734 GRQMIDHTKKLVEEKYTTANGYEGDAEVIYGDTD 767
>gi|401828411|ref|XP_003887919.1| DNA polymerase type-B delta catalytic subunit [Encephalitozoon hellem
ATCC 50504]
gi|392998927|gb|AFM98938.1| DNA polymerase type-B delta catalytic subunit [Encephalitozoon hellem
ATCC 50504]
Length = 974
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 235/508 (46%), Gaps = 76/508 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LSI+++ S G+ P + D I + + F N+ + I+ L +
Sbjct: 193 LKILSIDIECVSAGNSFPSSKSDPIIQIGNTLMLFGNEKHESQAIFCL---------KET 243
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
GIP V E L + K DPDI++G++I+G L ++ +R LGI +
Sbjct: 244 TGIPGASVHWYDTEKGLLESWKKYFMEVDPDIIVGYNIKGFDLPYILDRGEILGINDFSI 303
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R+ ++K + ++ NM +G + + + GR
Sbjct: 304 LGRSKKKAKT-------RDTTMSSNM--------------------FGSITTTEVEIDGR 336
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+++++ ++R + KL Y++ +V+ L+ + +P + + S +R R Y +
Sbjct: 337 LIIDMMVVIRRDYKLRSYSLNSVSIHFLKEQKEDVPPSSIGE-LQSKDKDSRRRIASYCL 395
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFG--IDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
L L + + L ++ +EL+RV G ID+F +RG+ ++ +++ R+A ++++
Sbjct: 396 RDTVLPLRLFSTLSVLINYTELSRVTGVPIDYF--FTRGTAIKMFALIYRVAAKEDFVV- 452
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P S E V+EP+ GFY PV V+DF SLYPS+MI+ NLC+ T L
Sbjct: 453 -PEVDPFESNRTFEG-GFVIEPKRGFYNKPVSVMDFTSLYPSIMISNNLCYTTLL----- 505
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+KE + R P + + +KG+LPR+L ++L +R +K+
Sbjct: 506 TKEQYRVLGGIR---------------TPTDNYFCSAERKKGLLPRILVDLLESRKKIKE 550
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
L N RQLA+KL AN YG+T A G++PC E++ S+ GR +
Sbjct: 551 E--LKKEKDPALKACLNGRQLAVKLCANSLYGFTGAS-KGKLPCFEISQSVTGFGREMIN 607
Query: 1432 KAISFVNENEKWK------AKVIYGDTD 1453
+ + EN K + VIYGDTD
Sbjct: 608 FTKNLIEENFSKKNGYTHDSVVIYGDTD 635
>gi|303275346|ref|XP_003056969.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461321|gb|EEH58614.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1067
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 231/509 (45%), Gaps = 72/509 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFE---NDSDHAVEIYVLLYCKSESHQRSLVG 1015
+LS++++ R PD +D + +A +D I+ L C +VG
Sbjct: 271 ILSVDIECAGRRGHFPDAEHDPVIQIATMVTCQGDDKPIIKAIWTLDTCAP------IVG 324
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
V + E L + K L S DPD+L+G++I +L RAA LG+
Sbjct: 325 ---ADVLSFTDERELLRSWGKFLRSTDPDLLIGYNIVNFDFPYLINRAATLGVEDFPYWG 381
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R + SK+ D+ S + +G + + + GR+
Sbjct: 382 RM-IGSKLRMKDTTFSSKA-------------------------YGTRDSKEITIEGRVQ 415
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ + ++ + KL+ Y++ AV+ L + + +++ +G R R Y +
Sbjct: 416 FDLLQAVQRDHKLSSYSLNAVSAHFLGEQKEDVHHSAISE-LQAGTSETRRRLAVYCLKD 474
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA----I 1251
A L ++++L + E+ARV G+ +LSRG +V S +LR A + L
Sbjct: 475 AYLPQRLLDKLMYMYNYIEMARVTGVPLSFLLSRGQSIKVLSQILRKARQRGLLVPHMPK 534
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ Q A E V++ ++G+Y P+ LDF SLYPS+M+A+NLC+CT + + +
Sbjct: 535 KGASDQQEGGVAYEG-ATVLDAKAGYYELPIATLDFASLYPSIMMAHNLCYCTLVPQNMV 593
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
S+ N VS P G ++V KG+LP +LEE+LS R K
Sbjct: 594 SRMNPEDVSK-----------------SPTGDVFVKSNKTKGILPEILEELLSARKRAKA 636
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+KK +Q L + + + RQLALK+ AN YG+T A G +PC E++ S GR+ +
Sbjct: 637 DLKK---AQDPLEKAVLDGRQLALKVSANSVYGFTGATV-GALPCLEISASTTSYGRNMI 692
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
++ V E K A VIYGDTD
Sbjct: 693 DQTKELVMEKYNTKNGYSANADVIYGDTD 721
>gi|157875046|ref|XP_001685930.1| putative DNA polymerase delta catalytic subunit [Leishmania major
strain Friedlin]
gi|68129003|emb|CAJ06437.1| putative DNA polymerase delta catalytic subunit [Leishmania major
strain Friedlin]
Length = 1032
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 237/506 (46%), Gaps = 67/506 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPD 1018
+LSI+++ + R L P+P +D + +A +H VE +SE +++ +
Sbjct: 239 ILSIDIECQGRKGLFPEPEHDPVIQIA-------NHCVE----YGHESEPLTKTIFTLKS 287
Query: 1019 C------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
C +V E + + + + DPDIL G++I +L RA L
Sbjct: 288 CAPIAGAQVLSYETEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLSRATALKAS--- 344
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLHVG 1131
++ ER + A+D + + G + L +
Sbjct: 345 --------DAFHYWGRQVHERTV---------------ARDKKFQSKQMGNREYTELTLE 381
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GRI+++ +++ + KL Y++ +V++ L + + +++ G R R Y
Sbjct: 382 GRIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHHSIISD-LQHGDEETRRRLAVY 440
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ A L ++++++L I E+ARV G+ +L RG Q +V SMLLR A + L +
Sbjct: 441 CLKDAFLPVKLLDRLMCIVNNVEMARVTGVPVGWLLERGQQIKVFSMLLRKAQKKK-LVV 499
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ S E V++P GFY PV LDF SLYPS++IA+NLC+ T + P
Sbjct: 500 PTVEYTGGSDRGYEG-ATVIDPIKGFYNCPVATLDFASLYPSIIIAHNLCYSTL---VRP 555
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ + P+ D L P ++V +V G+LP +L+++L+ R +
Sbjct: 556 AD------ARLYPE--------DALDRSPTSDVFVKKEVFPGILPEVLQDLLAARKHAR- 600
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
A+ K P + +++ N RQLALK+ AN YG+T A G++PC E++ S+ GR ++
Sbjct: 601 AMMKDVPMNSLEYKVLNGRQLALKVSANSVYGFTGAQV-GKLPCLEISASVTAYGRQMID 659
Query: 1432 KAISFVNENEKWKAKVIYGDTDRYTV 1457
+ + V E+ A+V+YGDTD V
Sbjct: 660 RTKNLV-EDLYPGARVLYGDTDSVMV 684
>gi|303390605|ref|XP_003073533.1| DNA polymerase catalytic subunit delta [Encephalitozoon intestinalis
ATCC 50506]
gi|303302680|gb|ADM12173.1| DNA polymerase catalytic subunit delta [Encephalitozoon intestinalis
ATCC 50506]
Length = 959
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 234/507 (46%), Gaps = 74/507 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS++++ S G+ P + D I N + + F +D + +I+ L +
Sbjct: 178 LKVLSLDIECVSIGNAFPSSKTDPIIQIGNTLTM-FGSDKYLSQDIFCL---------KE 227
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
GIP V E L + K DPDI++G++++G L ++ R LGI +
Sbjct: 228 TTGIPGVNVHWYETEKELLESWKKYFMELDPDIIIGYNVKGFDLPYILGRGEVLGIENFS 287
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ R+ + K D+ +S NM +G + + + G
Sbjct: 288 ILGRS--KKKARTRDTTMS-----SNM--------------------FGSIMTTEVEIEG 320
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+++++ ++R + KL Y++ +V+ L+ + +P+ + + S R R Y
Sbjct: 321 RLIIDMMVVIRRDFKLRSYSLNSVSIHFLKEQKEDVPYSSIGE-LQSKDKDTRRRIASYC 379
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ L L + ++L+++ +EL+RV G+ +RG+ ++ +++ R A + ++
Sbjct: 380 LRDTVLPLRLFSKLNVLINYAELSRVTGVPIEYFFTRGTAIKIFALIYRTASKEGFVV-- 437
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P S E V+EP+ GFY P+ V+DF SLYPS+MI++NLC+ T L K
Sbjct: 438 PETDPFESGKKYEG-GFVIEPKKGFYGKPISVMDFTSLYPSIMISHNLCYTTLLTK---- 492
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+L ++ P + P+ +KG+LPR+L ++L +R +K+
Sbjct: 493 -----------DQYRILGGIR-----TPTDNYFCSPERKKGLLPRILVDLLDSRKKIKEE 536
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+ N +QLA+KL AN YG+T A G++PC E++ S+ GR +
Sbjct: 537 --LKKEKDPAVKACLNGKQLAVKLCANSLYGFTGAS-KGKLPCFEISQSVTGFGREMIML 593
Query: 1433 AISFVNENEKWK------AKVIYGDTD 1453
+ EN K + VIYGDTD
Sbjct: 594 TKKLIEENFSKKNGYTHDSVVIYGDTD 620
>gi|403221257|dbj|BAM39390.1| DNA polymerase delta catalytic subunit [Theileria orientalis strain
Shintoku]
Length = 1072
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 230/497 (46%), Gaps = 71/497 (14%)
Query: 979 DSINVVALAFEN-DSDHAVEIYVLLYC--KSESHQRSLV-GIPDC------KVFVCSKEI 1028
+ I + F N + D ++I ++Y K + R+ V + DC V E
Sbjct: 284 ECIKLTGTGFPNANYDPVIQISSVIYTHGKDINETRNFVFTLKDCDQLSNAAVLSFETED 343
Query: 1029 HLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDS 1088
L + L DPD L G++I L +L R+ L I I+R I + S
Sbjct: 344 QLLLAWSDFLVQVDPDFLTGYNIIVFDLPYLLTRSTVLNIERFKKITR------IRSTSS 397
Query: 1089 EISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKL 1148
+ +++NM+ G +++ GRI+ +V+ L+R + KL
Sbjct: 398 NFKDAIVSNNMM--------------------GTYENKDINIEGRIMFDVYDLVRRDHKL 437
Query: 1149 NMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDM 1208
YT+ V+ L ++ + + ++K G R R Y + A L L ++N+L +
Sbjct: 438 KSYTLNYVSFEFLGQQKEDVHYSTISK-LQQGTSSDRRRIASYCLKDAILPLLLINKLLL 496
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--AISPGNHQVASQPAMEC 1266
+ E+ARV +++RG Q RV + R Y+ IS +++ E
Sbjct: 497 VFNYVEMARVTSTPIKFLITRGQQIRVTMQIYRQCRKMKYVIPVISSAGRHGSNENNYEG 556
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL--GKILPSKENTLGVSSFRP 1324
V++P+ G++ +P+ VLDFQSLYPS+MIAYNLC+ T + KIL E
Sbjct: 557 -ATVLDPQKGYHTNPIAVLDFQSLYPSIMIAYNLCYSTLVPQNKILNHPE---------- 605
Query: 1325 DLHVLRDLKDELLIPPN-GVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ-I 1382
+D IP + +V RKG+LP ++E ++ R ++A K +A Q +
Sbjct: 606 --------EDVTRIPGYIDLCFVKATKRKGILPIIVENLIEAR---RKAKKMMASCQDPM 654
Query: 1383 LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEK 1442
L ++++ RQLALK+ N YGYT A G +PC ++A +I GR+ + + + ++
Sbjct: 655 LKKVYDGRQLALKVTTNSVYGYTGAASGGFLPCVDVATAITSFGRNIILNTKNIIEDHFT 714
Query: 1443 WK------AKVIYGDTD 1453
K AKV+YGDTD
Sbjct: 715 VKNGYKNDAKVVYGDTD 731
>gi|224002805|ref|XP_002291074.1| DNA polymerase [Thalassiosira pseudonana CCMP1335]
gi|220972850|gb|EED91181.1| DNA polymerase, partial [Thalassiosira pseudonana CCMP1335]
Length = 999
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 232/515 (45%), Gaps = 70/515 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
L +LS +++ + R P+ +D + +A L+ D V+ I+ L C
Sbjct: 200 LRILSFDIECQGRKGYFPEAEHDPVIQIANCLSVYGDKAPIVQNIFTLKGC--------- 250
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
+ I +V E + + L + D DI G+++Q + +L +RA L ND
Sbjct: 251 LPIVGAQVISSETEQEMLLKWRTFLHASDADIFTGYNVQNFDIPYLLDRAEALWKK--ND 308
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+++ +R + + A +GR + + GR
Sbjct: 309 PKLRIFTQWGRVKNTQTKKR-------------QQMFQSSA-----YGRRENTETTIEGR 350
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
++ ++ M+ KL+ Y++ +V L ++ + +++ +G R+R Y +
Sbjct: 351 VIFDMLPYMQRNHKLSSYSLNSVCAEYLSQQKEDVHHSIISD-LQNGTDADRHRLAVYCL 409
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L +M++L ++ E+ARV G+ ++SRG Q +V SM+LR N + +
Sbjct: 410 KDALLPQRLMDKLSVLINYVEMARVTGVPVSFLISRGQQIKVFSMILRKCRDVNLVVPTL 469
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL-----GK 1308
+ E V++P +Y P+ LDF SLYPS+M AYNLC+ T + K
Sbjct: 470 RKSGAGADEGYEG-ATVLDPIKSYYEVPIATLDFASLYPSIMQAYNLCYSTMVSQHEASK 528
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
I PSK NG +V V+KG+LP +LEE+LS R
Sbjct: 529 IDPSKYKR----------------------SENGHTFVHSNVKKGILPIILEELLSARKR 566
Query: 1369 VKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+ +K AP+ + N RQLALK+ AN YG+T AG G++PC +A S+ GR
Sbjct: 567 AKKDMKN-APN-DFEKSVQNGRQLALKVSANSVYGFTGAGV-GQLPCVPIASSVTAYGRF 623
Query: 1429 TLEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
LEK ++V E+ K AKV+YGDTD V
Sbjct: 624 LLEKTKAYVEEHYTVAHGYKHNAKVVYGDTDSVMV 658
>gi|391325933|ref|XP_003737481.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Metaseiulus
occidentalis]
Length = 1088
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 224/505 (44%), Gaps = 70/505 (13%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSLVG 1015
+LS +++ R + P+P D + +A + + D + I L C
Sbjct: 296 VLSFDIECAGRKGIFPEPNKDRVIQIASMVVRQGQKDPFIRNIMTLDTCAP--------- 346
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
IP +V E + + + DPDI+ G++I +L RA HL + +
Sbjct: 347 IPGVEVMSFDTESKMLDQWAAFIRLVDPDIITGYNILNFDYTYLVNRAKHLKVKNFPYLG 406
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R RG +E V+ ES+ I + GR + + GR+
Sbjct: 407 RI---------------RG------SESVIKESM-----IQSKQMGRRENKNVTMEGRVN 440
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ + + KL YT+ AV+ L+ + + ++T +G + R R Y +
Sbjct: 441 FDLLLALLRDYKLRSYTLNAVSYNFLQEQKEDVQHSIITD-LQNGDEQTRRRLAVYCLKD 499
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L L ++ +L I E+ARV G+ +L RG Q +V S LLR A Q+ L + N
Sbjct: 500 ALLPLRLLEKLMCIINYMEMARVTGVPLSYLLLRGQQIKVVSQLLRKAREQD-LILPVIN 558
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
Q V+EP G+Y+ P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 559 VQTGDDFTGAT---VIEPTRGYYSVPIATLDFSSLYPSIMMAHNLCYTTLLN-------- 607
Query: 1316 TLGVSSFRPDLHVLRDLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
D + LK D+ + P+G +V RKG+LP +LE +LS R K +K
Sbjct: 608 ---------DQKMREQLKPDQYIKTPSGDYFVKASCRKGLLPDILESLLSARKKAKTDLK 658
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
++ + RQLALK+ AN YG+T A G++PC ++ S GR +++
Sbjct: 659 N--EKDPFRKKVLDGRQLALKISANSVYGFTGAQV-GKLPCLAISQSTTAFGRQMIDETA 715
Query: 1435 SFVNENE------KWKAKVIYGDTD 1453
V ++ AKVIYGDTD
Sbjct: 716 REVEAKYCQKNGFQYDAKVIYGDTD 740
Score = 47.4 bits (111), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 16 VSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYV 72
V +DHY+ P G S L VPV RV+GST G H+H LPY YV
Sbjct: 84 VDLDHYIGPIKAGMTTVTSGL-------VPVTRVFGSTEEGHSVLCHVHGFLPYFYV 133
>gi|78191525|gb|ABB29977.1| DNA-directed polymerase delta 1 [Homo sapiens]
Length = 1133
Score = 163 bits (413), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 234/531 (44%), Gaps = 91/531 (17%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 310 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 361
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 362 PILGAKVQSYEKEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 413
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P ++A S I + + GR + +
Sbjct: 414 -KVQTFPFLGRVAGLCSNIRDSSFQSK--------------------QTGRRDTKVVSMV 452
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 453 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 511
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 512 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMP 571
Query: 1250 --------------------AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQS 1289
+ P + A+ + P +Y P+ L F S
Sbjct: 572 VVKSEGGEDYTGATVIGPLKGVRPQDRAGAAWELLALTPGRGCSPPRYYDVPIATLGFSS 631
Query: 1290 LYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPK 1349
LYPS+M+A+NLC+ T L P LG++ +D+ + P G +V
Sbjct: 632 LYPSIMMAHNLCYTTLL---RPGTAQKLGLT------------EDQFIRTPTGDEFVKTS 676
Query: 1350 VRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAG 1408
VRKG+LP++LE +LS R K+A +LA L R + + RQL LK+ AN YG+T A
Sbjct: 677 VRKGLLPQILENLLSAR---KRAKAELAKETDPLRRQVLDGRQLGLKVSANSVYGFTGAQ 733
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK------AKVIYGDTD 1453
G++PC E++ S+ GR +EK V + AKV+YGDTD
Sbjct: 734 V-GKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 783
Score = 43.9 bits (102), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG VPV+R +G T G C
Sbjct: 88 DPQTEPLIF--QQLEIDHYVGPAQPVPGGPPPSH-------GSVPVLRAFGVTDEGFSVC 138
Query: 61 LHIHRALPYLYVP 73
HIH PY Y P
Sbjct: 139 CHIHGFAPYFYTP 151
>gi|268557320|ref|XP_002636649.1| Hypothetical protein CBG23360 [Caenorhabditis briggsae]
Length = 1081
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 236/511 (46%), Gaps = 74/511 (14%)
Query: 960 LSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSLVGI 1016
LS++++ R + P+ D I +A + E +S+ V +VL C +H +VG
Sbjct: 283 LSLDIECIGRRGIFPEAIKDPIIQIANLVKVEGESEPFVRNCFVLGTC---AH---VVG- 335
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+ C E L + + + DPDI+ G++I L ++ +RA L + ++ + R
Sbjct: 336 --SNIIECVNEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKVLSLPQVSHLGR 393
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
++G S++ AI + G + + GRI+
Sbjct: 394 Q-------------RDKG-------------SVVRDAAISSKQMGSRVNKSIDIHGRIIF 427
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
+V +++ + KL YT+ +V+ L + + ++ G + R R +Y + A
Sbjct: 428 DVLQVVLRDYKLRSYTLNSVSYQFLSEQKEDVEHNIIPD-LQRGDEQTRRRLAQYCLKDA 486
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN-YLAISPGN 1255
L L ++++L I E+ARV G+ +L++G Q ++ SM+LR N +L + N
Sbjct: 487 YLPLRLLDKLMSIINYIEMARVTGVPMNFLLTKGQQIKILSMMLRRCKQNNFFLPVIEAN 546
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
E V++P GFY +P+ LDF SLYPS+MIA+NLC+ T L ++
Sbjct: 547 S--GDGEGYEG-ATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLL-------KS 596
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
GV + + + P+G + R+G+LP +LE++L+ R K +K
Sbjct: 597 PQGVEN------------KDYIRTPSGQYFATKSKRRGLLPEILEDLLAARKRAKNDMKN 644
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ ++N RQLALK+ AN YG+T A G++PC E++ S+ GR ++ S
Sbjct: 645 --EKDEFKRMVYNGRQLALKISANSVYGFTGATV-GKLPCLEISQSVTAFGRKMIDMTKS 701
Query: 1436 FVNENEK---------WKAKVIYGDTDRYTV 1457
V K AKVIYGDTD V
Sbjct: 702 EVERIYKKGALDGKCPADAKVIYGDTDSVMV 732
>gi|123496446|ref|XP_001326973.1| polymerase zeta subunit [Trichomonas vaginalis G3]
gi|121909895|gb|EAY14750.1| polymerase zeta subunit, putative [Trichomonas vaginalis G3]
Length = 1045
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 221/484 (45%), Gaps = 74/484 (15%)
Query: 991 DSDHAVEIYVLLYCKSESHQR--------SLVGIPDCKVFVCSKEIHLFSHFIKILCSFD 1042
D+D ++I + + E H R + I +F E L +F + + D
Sbjct: 267 DNDPVIQICCYVAVQGEEHSRFSAAFILNTCTPIVGSALFQFENEKDLLINFQRFIQWVD 326
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
P+I+ G++I G + +L ER+ IA +E E L
Sbjct: 327 PEIITGYNICGFDIPYLVERS-------------------IAIKANEFCE-------LGR 360
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
V S + + G + + GRI ++ ++ + KL Y++ AV+ +
Sbjct: 361 YVKEFSTCKETTKGTKQLGYRETKDVDINGRIQYDMMIAIKNDFKLRSYSLNAVSAQFIG 420
Query: 1163 RKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGID 1222
+ + + +++K +G R+R Y V A L L++MN+L + T EL+RV +
Sbjct: 421 DQKEDVHYSMISK-LQNGSDTDRHRLAIYCVKDAYLPLQLMNKLLSVLTTIELSRVCHVP 479
Query: 1223 FFSVLSRGSQYRVESMLLRLAHTQNYL--AISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
VL+RG Q RV S +L + +N + A++ Q A V+EP +G+Y
Sbjct: 480 VNYVLNRGQQIRVFSQILYKSVRRNLIIPALTSQKSDDQYQGAT-----VIEPSTGYYTT 534
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
P+ LDF SLYPS+MI +N+C+ T + K PD +V + P
Sbjct: 535 PIPTLDFNSLYPSIMIGHNICYSTLMTK---------------PDPNVQYEKS------P 573
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
N + GVLP +L+E+L+ R K+ +++ Q ++F+ RQLALK+ AN
Sbjct: 574 NHCFFAKHDEFPGVLPEILKELLAARKATKKLMEEATDPMQ--KKVFDKRQLALKISANS 631
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK-------AKVIYGDTD 1453
YG+T A G++PC ++++S+ GRS +E V EN+ K A VIYGDTD
Sbjct: 632 VYGFTGATV-GKLPCLQISESVTAYGRSMIEMTKELV-ENKYNKQNGYSDDAHVIYGDTD 689
Query: 1454 RYTV 1457
V
Sbjct: 690 SVMV 693
>gi|17559488|ref|NP_506017.1| Protein F10C2.4 [Caenorhabditis elegans]
gi|13124199|sp|P90829.1|DPOD1_CAEEL RecName: Full=DNA polymerase delta catalytic subunit
gi|3875739|emb|CAB04077.1| Protein F10C2.4 [Caenorhabditis elegans]
Length = 1081
Score = 163 bits (412), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 234/511 (45%), Gaps = 74/511 (14%)
Query: 960 LSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSLVGI 1016
LS++++ R + P+ D I +A + E +++ V +VL C +VG
Sbjct: 283 LSLDIECIGRRGVFPEAIKDPIIQIANLVKIEGEAEPFVRNCFVLGTCAP------VVG- 335
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+ C E L + + + DPDI+ G++I L ++ +RA L + ++ + R
Sbjct: 336 --SNIIQCVNEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKVLSLPQVSHLGR 393
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
E+G S++ AI + G + + GRI+
Sbjct: 394 Q-------------KEKG-------------SVVRDAAISSKQMGSRVNKSIDIHGRIIF 427
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
+V +++ + KL YT+ +V+ L + + ++ G + R R +Y + A
Sbjct: 428 DVLQVVLRDYKLRSYTLNSVSYQFLSEQKEDVEHNIIPD-LQRGDEQTRRRLAQYCLKDA 486
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY-LAISPGN 1255
L L ++++L I E+ARV G+ +L++G Q ++ SM+LR N+ L + N
Sbjct: 487 YLPLRLLDKLMSIINYIEMARVTGVPMNFLLTKGQQIKILSMMLRRCKQNNFFLPVIEAN 546
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
E V++P GFY +P+ LDF SLYPS+MIA+NLC+ T L ++
Sbjct: 547 S--GDGEGYEG-ATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLL-------KS 596
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
GV + ++ + P+G + R+G+LP +LE+IL+ R K +K
Sbjct: 597 PQGVEN------------EDYIRTPSGQYFATKSKRRGLLPEILEDILAARKRAKNDMKN 644
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ ++N RQLALK+ AN YG+T A G++PC E++ S+ GR ++
Sbjct: 645 --EKDEFKRMVYNGRQLALKISANSVYGFTGATV-GKLPCLEISQSVTAFGRKMIDMTKL 701
Query: 1436 FVNENEK---------WKAKVIYGDTDRYTV 1457
V K AKVIYGDTD V
Sbjct: 702 EVERIYKKGALDGKCPADAKVIYGDTDSVMV 732
>gi|449709355|gb|EMD48635.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
histolytica KU27]
Length = 1077
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 231/526 (43%), Gaps = 67/526 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R P P D + +A + F ++VL C
Sbjct: 257 LRILSFDIECAGRKGSFPVPELDPVIQIANYVVEFGKPDVVTKNVFVLKGCSP------- 309
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
IP ++ E L + + + D DI G++I +L ERA L +
Sbjct: 310 --IPGAIIYDYDTEEELLKGWSDFINAIDVDIFTGYNIMNFDFKYLLERAKVLKV----- 362
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
S S +S R T A V R +++ GR
Sbjct: 363 ---KDFSSFSKLKSSHVSIRQSTFQSKAVGV-----------------RESNELINLEGR 402
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I +++++++ + KL YT+ V+ L + + + +T G R R Y +
Sbjct: 403 IPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQKEEVHYADITT-LHEGSMDDRNRIAVYCL 461
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
L ++++ +L + E+ RV GI +L RG Q +V + L R A+ +N P
Sbjct: 462 KDTYLPIKLLEKLMSLVNGFEMCRVTGIPLSYLLPRGQQVKVITQLYRHANAKNLFI--P 519
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI---- 1309
+ + V+ P GFY P+ LDF SLYPS+MI++NLC+ T + I
Sbjct: 520 FFQRTKTNGDKYVGATVINPIKGFYKVPISTLDFSSLYPSIMISHNLCYSTLIDGIKTRK 579
Query: 1310 -LPSKENTLGVSSFRPDL----HVLRDLKDELL------IPPNGVMYVPPKVRKGVLPRL 1358
+PS E L S D +++ LKD+ L + PNG ++V RKG+LP +
Sbjct: 580 DIPSIE-FLKTSESEEDRKLYDQIMKKLKDKQLNVEDVELSPNGDLFVKSSKRKGILPEI 638
Query: 1359 LEEILSTRIMVKQAIKKLAPSQQILH-RIFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
LE +L+ R KQA K +A + + N RQLALK+ AN YG+T A G++PC +
Sbjct: 639 LENLLAAR---KQAKKDMAAATDPFKITVLNGRQLALKVSANSVYGFTGAQI-GKLPCMQ 694
Query: 1418 LADSIVQCGRSTLEKAISFVNENEK------WKAKVIYGDTDRYTV 1457
+A S+ GR+ +E + V E W A+V+YGDTD V
Sbjct: 695 IASSVTSYGRTMIELTKTTVEEKYSKKNGFPWDAQVVYGDTDSVMV 740
>gi|67478112|ref|XP_654477.1| DNA polymerase delta catalytic subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56471523|gb|EAL49087.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 1077
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 231/526 (43%), Gaps = 67/526 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R P P D + +A + F ++VL C
Sbjct: 257 LRILSFDIECAGRKGSFPVPELDPVIQIANYVVEFGRPDVVTKNVFVLKGCSP------- 309
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
IP ++ E L + + + D DI G++I +L ERA L +
Sbjct: 310 --IPGAIIYDYDTEEELLKGWSDFINAIDVDIFTGYNIMNFDFKYLLERAKVLKV----- 362
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
S S +S R T A V R +++ GR
Sbjct: 363 ---KDFSSFSKLKSSHVSIRQSTFQSKAVGV-----------------RESNELINLEGR 402
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I +++++++ + KL YT+ V+ L + + + +T G R R Y +
Sbjct: 403 IPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQKEEVHYADITT-LHEGSMDDRNRIAVYCL 461
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
L ++++ +L + E+ RV GI +L RG Q +V + L R A+ +N P
Sbjct: 462 KDTYLPIKLLEKLMSLVNGFEMCRVTGIPLSYLLPRGQQVKVITQLYRHANAKNLFI--P 519
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI---- 1309
+ + V+ P GFY P+ LDF SLYPS+MI++NLC+ T + I
Sbjct: 520 FFQRTKTNGDKYVGATVINPIKGFYKVPISTLDFSSLYPSIMISHNLCYSTLIDGIKTRK 579
Query: 1310 -LPSKENTLGVSSFRPDL----HVLRDLKDELL------IPPNGVMYVPPKVRKGVLPRL 1358
+PS E L S D +++ LKD+ L + PNG ++V RKG+LP +
Sbjct: 580 DIPSIE-FLKTSESEEDRKLYDQIMKKLKDKQLNVEDVELSPNGDLFVKSSKRKGILPEI 638
Query: 1359 LEEILSTRIMVKQAIKKLAPSQQILH-RIFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
LE +L+ R KQA K +A + + N RQLALK+ AN YG+T A G++PC +
Sbjct: 639 LENLLAAR---KQAKKDMAAATDPFKITVLNGRQLALKVSANSVYGFTGAQI-GKLPCMQ 694
Query: 1418 LADSIVQCGRSTLEKAISFVNENEK------WKAKVIYGDTDRYTV 1457
+A S+ GR+ +E + V E W A+V+YGDTD V
Sbjct: 695 IASSVTSYGRTMIELTKTTVEEKYSKKNGFPWDAQVVYGDTDSVMV 740
>gi|407045124|gb|EKE43021.1| DNA polymerase delta catalytic subunit, putative [Entamoeba nuttalli
P19]
Length = 1077
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 231/526 (43%), Gaps = 67/526 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R P P D + +A + F ++VL C
Sbjct: 257 LRILSFDIECAGRKGSFPVPELDPVIQIANYVVEFGKPDVVTKNVFVLKGCSP------- 309
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
IP ++ E L + + + D DI G++I +L ERA L +
Sbjct: 310 --IPGAIIYDYDTEEELLKGWSDFINAIDVDIFTGYNIMNFDFKYLLERAKVLKV----- 362
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
S S +S R T A V R +++ GR
Sbjct: 363 ---KDFSSFSKLKSSHVSIRQSTFQSKAVGV-----------------RESNELINLEGR 402
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I +++++++ + KL YT+ V+ L + + + +T G R R Y +
Sbjct: 403 IPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQKEEVHYADITT-LHEGSMDDRNRIAVYCL 461
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
L ++++ +L + E+ RV GI +L RG Q +V + L R A+ +N P
Sbjct: 462 KDTYLPIKLLEKLMSLVNGFEMCRVTGIPLSYLLPRGQQVKVITQLYRHANAKNLFI--P 519
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI---- 1309
+ + V+ P GFY P+ LDF SLYPS+MI++NLC+ T + I
Sbjct: 520 FFQRTKTNGDKYVGATVINPIKGFYKVPISTLDFSSLYPSIMISHNLCYSTLIDGIKTRK 579
Query: 1310 -LPSKENTLGVSSFRPDL----HVLRDLKDELL------IPPNGVMYVPPKVRKGVLPRL 1358
+PS E L S D +++ LKD+ L + PNG ++V RKG+LP +
Sbjct: 580 DVPSIE-FLKTSESEEDRKLYDQIMKKLKDKQLNVEDVELSPNGDLFVKSSKRKGILPEI 638
Query: 1359 LEEILSTRIMVKQAIKKLAPSQQILH-RIFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
LE +L+ R KQA K +A + + N RQLALK+ AN YG+T A G++PC +
Sbjct: 639 LENLLAAR---KQAKKDMAAATDPFKITVLNGRQLALKVSANSVYGFTGAQI-GKLPCMQ 694
Query: 1418 LADSIVQCGRSTLEKAISFVNENEK------WKAKVIYGDTDRYTV 1457
+A S+ GR+ +E + V E W A+V+YGDTD V
Sbjct: 695 IASSVTSYGRTMIELTKTTVEEKYSKKNGFPWDAQVVYGDTDSVMV 740
>gi|290985690|ref|XP_002675558.1| predicted protein [Naegleria gruberi]
gi|284089155|gb|EFC42814.1| predicted protein [Naegleria gruberi]
Length = 1019
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 146/491 (29%), Positives = 230/491 (46%), Gaps = 71/491 (14%)
Query: 989 ENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSF------- 1041
E+D + YV + KSE ++++ + DC V EIH F ++L ++
Sbjct: 232 ESDPVIVISNYVTVQGKSEPLIKNILCLGDCAPIV-GVEIHCFKTEKEMLETWRNFVIGI 290
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLA 1101
DPDI+ G+++ L +L RA L G P +IA S++ +
Sbjct: 291 DPDIITGYNVINFDLPYLINRAKALKSGSF------PFLGRIAGKRSQMKNSTFSSKA-- 342
Query: 1102 EPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
+G + +++ GRI L+V + ++ + KL+ YT+ +V+ L
Sbjct: 343 ------------------YGTRESKDINIEGRIQLDVMQAIQRDHKLSSYTLNSVSAHFL 384
Query: 1162 RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
+ + +++ G R R Y + A L + ++ +L +I E+ARV GI
Sbjct: 385 GDQKEEVHHSIIST-LHEGSDEDRRRLASYCLKDAFLPIRLLEKLLIIINYIEMARVTGI 443
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNYL--AISPGNHQVASQPAMECLP------LVMEP 1273
+L RG Q +V S LLR A + YL IS + + E V+ P
Sbjct: 444 PVSFILKRGQQIKVISQLLRKAKKEEYLMPTISKSGKKESLDEEGETSEETYEGGFVLSP 503
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK 1333
++G+Y P+ LDF SLYPS+MIA+NLC+ T L K DL L +
Sbjct: 504 KTGYYDIPITTLDFASLYPSIMIAHNLCYTTLLKK---------------EDLAKLSE-- 546
Query: 1334 DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQL 1392
D+ + P+G ++ +V++G+LP +LEE+L R KQA K + + L + + N RQL
Sbjct: 547 DQYVKTPSGDYFIKREVQQGLLPLVLEELLQAR---KQAKKDMDKATDPLEKAVMNGRQL 603
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK------AK 1446
ALK+ AN YG+T A G +PC E++ S+ GR ++ V EN K A
Sbjct: 604 ALKISANSVYGFTGAQV-GMLPCLEISQSVTSFGREMIQHTKEMVEENYTIKNGYETNAV 662
Query: 1447 VIYGDTDRYTV 1457
VIYGDTD V
Sbjct: 663 VIYGDTDSVMV 673
>gi|71033557|ref|XP_766420.1| DNA polymerase delta catalytic subunit [Theileria parva strain
Muguga]
gi|68353377|gb|EAN34137.1| DNA polymerase delta catalytic subunit, putative [Theileria parva]
Length = 1095
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 221/448 (49%), Gaps = 54/448 (12%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
+ +C + E L + + DPD L G++I L +L R++ L I
Sbjct: 347 SLANCTILSFDNEEQLLLAWNDFVTFVDPDFLTGYNIILFDLPYLLTRSSVLNIE----- 401
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
+R ++I + + + +N+L G +++ GRI
Sbjct: 402 ARFKKLTRIRSVNCNFKDSISNNNIL--------------------GLYENKEINIEGRI 441
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+ +V+ L+R + KL Y++ V+ L+++ + + + K F +G R R Y +
Sbjct: 442 LFDVYDLVRRDYKLKSYSLNFVSFEFLKQQKEDVHYSTILKLF-NGNNNDRRRIASYCLK 500
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--AIS 1252
+ L L ++N+L ++ E++RV +++RG Q RV + + NY+ I+
Sbjct: 501 DSILPLLLINKLLLLYNYIEMSRVTTTPIKLLITRGQQIRVTMQIYKQCKKMNYVIPVIA 560
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
G +++ + E V+EP G++ +P+ VLDFQSLYPS+MIA+N+C+ T L
Sbjct: 561 GGGKSSSNENSYEG-ATVLEPLKGYHKNPISVLDFQSLYPSIMIAHNICYSTLL------ 613
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPP-NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
N +++++P+ D + +P N + ++ K RKG+LP ++E +++ R K+
Sbjct: 614 --NYNTINNYKPE--------DIVTVPGYNDICFINVKKRKGILPIIVENLINERKKAKK 663
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+ + ++L ++++ RQLALK+ N YGYT A G +PC ++A +I GR+ +
Sbjct: 664 MMNEC--KDEMLKKVYDGRQLALKITTNSVYGYTGATSGGFLPCIDVATAITSFGRNMIV 721
Query: 1432 KAISFVNEN------EKWKAKVIYGDTD 1453
+ E+ K+ +KVIYGDTD
Sbjct: 722 NTKDLIEEHFSRKNGFKFDSKVIYGDTD 749
>gi|406701433|gb|EKD04579.1| hypothetical protein A1Q2_01151 [Trichosporon asahii var. asahii CBS
8904]
Length = 912
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 236/509 (46%), Gaps = 76/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + + + + +H +VG
Sbjct: 254 LRVLSFDIECAGRKGIFPEANIDPVIQIAAMVTRHGEKKPFVRNVFTLNTCAH---IVG- 309
Query: 1017 PDCKVFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
K F+ +++ L + F++ DPD+++G++I L +L +RA L I + +
Sbjct: 310 AQVKQFMDERQLLLAWRDFVQ---EVDPDLVIGYNISNFDLPYLLDRAKALKIPDFSYLG 366
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R LE D+ S + +G+ + +++ GR+
Sbjct: 367 R--LE------DTHFSSKA-------------------------FGQRDSKAVNLDGRLQ 393
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
+++ ++++ + KL YT+ AV L + + ++T+ +G +R R Y + R
Sbjct: 394 MDILQVIQRDYKLRSYTLNAVCAQFLGEQKEDVHHSIITE-LQNGTADSRRRLAVYCLKR 452
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
++++L + +ELARV GI F VL+RG Q RV S L R A + YL P
Sbjct: 453 ------LLDRLMCLVNYTELARVTGIPFNDVLTRGQQIRVISQLYRNAKDKGYLI--PAM 504
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T + K +
Sbjct: 505 RSEGTDEQYEG-ATVIEPSKGYYDTPIATLDFASLYPSIMMAHNLCYTTLVDKATIQR-- 561
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
LG+ ++ + PN ++ K RKG+LP +LE +L R K+A
Sbjct: 562 -LGLVE-----------NEDYVQTPNNDFFMTEKRRKGLLPHVLENLLGAR---KRAKAD 606
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE--- 1431
L + R + + RQLALK+ AN YG+T A G++PC ++ S+ GR ++
Sbjct: 607 LKVEKDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLAISTSVTAYGRQMIDMTK 665
Query: 1432 ---KAISFVNENEKWKAKVIYGDTDRYTV 1457
+A + A+VIYGDTD V
Sbjct: 666 REVEAQYSIQNGYDHDAQVIYGDTDSVMV 694
>gi|401882228|gb|EJT46496.1| hypothetical protein A1Q1_04928 [Trichosporon asahii var. asahii CBS
2479]
Length = 912
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 236/509 (46%), Gaps = 76/509 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ D + +A + + + + +H +VG
Sbjct: 254 LRVLSFDIECAGRKGIFPEANIDPVIQIAAMVMRHGEKKPFVRNVFTLNTCAH---IVG- 309
Query: 1017 PDCKVFVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
K F+ +++ L + F++ DPD+++G++I L +L +RA L I + +
Sbjct: 310 AQVKQFMDERQLLLAWRDFVQ---EVDPDLVIGYNISNFDLPYLLDRAKALKIPDFSYLG 366
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R LE D+ S + +G+ + +++ GR+
Sbjct: 367 R--LE------DTHFSSKA-------------------------FGQRDSKAVNLDGRLQ 393
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
+++ ++++ + KL YT+ AV L + + ++T+ +G +R R Y + R
Sbjct: 394 MDILQVIQRDYKLRSYTLNAVCAQFLGEQKEDVHHSIITE-LQNGTADSRRRLAVYCLKR 452
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
++++L + +ELARV GI F VL+RG Q RV S L R A + YL P
Sbjct: 453 ------LLDRLMCLVNYTELARVTGIPFNDVLTRGQQIRVISQLYRNAKDKGYLI--PAM 504
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T + K +
Sbjct: 505 RSEGTDEQYEG-ATVIEPSKGYYDTPIATLDFASLYPSIMMAHNLCYTTLVDKATIQR-- 561
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
LG+ ++ + PN ++ K RKG+LP +LE +L R K+A
Sbjct: 562 -LGLVE-----------NEDYVQTPNNDFFMTEKRRKGLLPHVLENLLGAR---KRAKAD 606
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE--- 1431
L + R + + RQLALK+ AN YG+T A G++PC ++ S+ GR ++
Sbjct: 607 LKVEKDPFKRAVLDGRQLALKISANSVYGFTGATI-GKLPCLAISTSVTAYGRQMIDMTK 665
Query: 1432 ---KAISFVNENEKWKAKVIYGDTDRYTV 1457
+A + A+VIYGDTD V
Sbjct: 666 REVEAQYSIQNGYDHDAQVIYGDTDSVMV 694
>gi|403353908|gb|EJY76499.1| DNA polymerase [Oxytricha trifallax]
Length = 1068
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 232/511 (45%), Gaps = 73/511 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+ +LS +++ + P P+ D + N+V + E D ++ L C
Sbjct: 256 IRILSFDIECGADKGRFPQPQTDPVIQIANIVKIHGE-DQPFVRNVFTLKEC-------- 306
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +V + E L + + + DPDI+ G++I ++ RA LG+
Sbjct: 307 -APILGTQVNWFNSETALLASWRDFILEVDPDIITGFNIVNFDFPYIINRAIQLGM---- 361
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
P KI + I + L + K+ I+E G
Sbjct: 362 --KNYPTFGKIIDSQTRIKNGTFSSKALG------TRDTKEIIME--------------G 399
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ +L E KL YT+ +V+ L + + + R R Y
Sbjct: 400 RVQFDMLQLFLREYKLRSYTLNSVSSEFLGEQKEDVHHSQIF-ILQEKDQFTRRRLAIYC 458
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E++RV G+ + +RG Q +V S L R A+ N L
Sbjct: 459 LKDAYLPLRLMEKLLSLYNFTEMSRVTGVPISYLFTRGQQIKVTSQLYRKANACNLLI-- 516
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P +++ E LV++P F+ +P+ +LDF SLYPS+M+A+N+C+ T ++P
Sbjct: 517 PTERGPSNEGKFEG-ALVIDPNRDFFLEPIAILDFASLYPSIMLAHNICYST----LIPP 571
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
K V + PD H L+ P G ++ +V+KG+LP +LEE++ R K+A
Sbjct: 572 K----AVKFYNPD-HYLK--------TPTGDHFIKAEVKKGILPLILEELIEAR---KKA 615
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
K+ A S + + + RQ+A+K+ AN YG+T A G++PC ++ S+ GR +E
Sbjct: 616 KKEFALSDE--KAVLDGRQMAMKVAANSVYGFTGAQI-GQLPCIAISSSVTAYGREMIEM 672
Query: 1433 AISFV------NENEKWKAKVIYGDTDRYTV 1457
+ +FV K+ ++VIYGDTD V
Sbjct: 673 SKNFVITRFNKQNGYKYDSEVIYGDTDSVMV 703
>gi|307110156|gb|EFN58392.1| DNA polymerase delta subunit [Chlorella variabilis]
Length = 1011
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 235/520 (45%), Gaps = 85/520 (16%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAVEIYVLLYCKSESHQRSLVG 1015
+LS++++ + R P+P +D I + +L E + K + R+++
Sbjct: 218 FRILSVDIECQGRKGHFPEPEHDPVIQIASLVTE-------------FGKKQPAVRNIMT 264
Query: 1016 IPDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIG 1069
+ C +V E L + ++ DPDI++G++I L +L RA L I
Sbjct: 265 LKSCAPITGAEVMSFDDEKALLLRWRDLVLEADPDIIIGYNIVNFDLPYLLNRADTLKIP 324
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
R + D+ S + +G +
Sbjct: 325 QFWTWGRLR-NRRCRMKDARFSSKA-------------------------YGTHDFKEIS 358
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCV 1189
+ GR+ ++ + ++ + KL+ Y++ +V+ L + + ++K G +R R
Sbjct: 359 IEGRVQFDLLQAIQRDHKLSSYSLNSVSAHFLGEQKEDVHHSDISK-LQDGNAESRRRLA 417
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y + A L ++++L + E+ARV G+ +LSRG +V S +LR + T+N +
Sbjct: 418 IYCLKDAYLPQRLVDKLMYMYNYVEMARVTGVPMSYLLSRGQSIKVFSQILRKSRTKNLV 477
Query: 1250 A--ISPG---NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
+ G N VA + A V+EP++G+Y PV LDF SLYPS+M+A+NLC+ T
Sbjct: 478 VPNMKRGGDPNEGVAYEGAT-----VLEPKAGYYDKPVATLDFASLYPSIMMAHNLCYTT 532
Query: 1305 CLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILS 1364
+ K G + P K+ L I PNG +V + GVLP +L+E+L+
Sbjct: 533 LVPK---------GHENMFP--------KEHLTISPNGDTFVKSSLATGVLPEILQELLA 575
Query: 1365 TRIMVKQAIKKLAPSQQ-ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIV 1423
R K+A K + + L +FN RQ+ALK+ AN YG+T A G +PC E++ S+
Sbjct: 576 AR---KRARKDMGEATDPFLRAVFNGRQMALKVSANSVYGFTGATV-GALPCLEISSSVT 631
Query: 1424 QCGR----STLEKAISFVNENEKWK--AKVIYGDTDRYTV 1457
GR T + + N + A VIYGDTD V
Sbjct: 632 SFGREMIMETRRRVMEKYNRANGYTHDADVIYGDTDSVMV 671
>gi|403360889|gb|EJY80140.1| DNA polymerase delta catalytic subunit [Oxytricha trifallax]
Length = 870
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 232/511 (45%), Gaps = 73/511 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+ +LS +++ + P P+ D + N+V + E D ++ L C
Sbjct: 256 IRILSFDIECGADKGRFPQPQTDPVIQIANIVKIHGE-DQPFVRNVFTLKECAP------ 308
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +V + E L + + + DPDI+ G++I ++ RA LG+
Sbjct: 309 ---ILGTQVNWFNSETALLASWRDFILEVDPDIITGFNIVNFDFPYIINRAIQLGM---- 361
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
P KI + I + L + K+ I+E G
Sbjct: 362 --KNYPTFGKIIDSQTRIKNGTFSSKALG------TRDTKEIIME--------------G 399
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ +L E KL YT+ +V+ L + + + R R Y
Sbjct: 400 RVQFDMLQLFLREYKLRSYTLNSVSSEFLGEQKEDVHHSQIF-ILQEKDQFTRRRLAIYC 458
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L +M +L + +E++RV G+ + +RG Q +V S L R A+ N L
Sbjct: 459 LKDAYLPLRLMEKLLSLYNFTEMSRVTGVPISYLFTRGQQIKVTSQLYRKANACNLLI-- 516
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P +++ E LV++P F+ +P+ +LDF SLYPS+M+A+N+C+ T ++P
Sbjct: 517 PTERGPSNEGKFEG-ALVIDPNRDFFLEPIAILDFASLYPSIMLAHNICYST----LIPP 571
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
K V + PD H L+ P G ++ +V+KG+LP +LEE++ R K+A
Sbjct: 572 K----AVKFYNPD-HYLK--------TPTGDHFIKAEVKKGILPLILEELIEAR---KKA 615
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
K+ A S + + + RQ+A+K+ AN YG+T A G++PC ++ S+ GR +E
Sbjct: 616 KKEFALSDE--KAVLDGRQMAMKVAANSVYGFTGAQI-GQLPCIAISSSVTAYGREMIEM 672
Query: 1433 AISFV------NENEKWKAKVIYGDTDRYTV 1457
+ +FV K+ ++VIYGDTD V
Sbjct: 673 SKNFVITRFNKQNGYKYDSEVIYGDTDSVMV 703
>gi|167533381|ref|XP_001748370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773182|gb|EDQ86825.1| predicted protein [Monosiga brevicollis MX1]
Length = 1305
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 149/553 (26%), Positives = 243/553 (43%), Gaps = 113/553 (20%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
L +LS +++ + R + PDP DS+ +A + + S + ++ L C + +
Sbjct: 316 LRILSFDIECQGRKGVFPDPNEDSVIQIANMVQIQGQSKPIIRNVFTLDSCAA------I 369
Query: 1014 VGI-------PDCKVFV--CSKEIHLFSHFIKILCSF----DPDILMGWDIQGGSLGFLA 1060
VG P KV + SK L ++ F DPD++ G++I L +L
Sbjct: 370 VGCDVREFADPTSKVSLKPGSKRNELEKQMLEAWSEFVREADPDVITGYNIPNFDLPYLY 429
Query: 1061 ERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEW 1120
RA LG ++ P ++ S +++ + +
Sbjct: 430 NRANKLGA------TKFPFLGRLKNVQSRLTDVKFSSKA--------------------Y 463
Query: 1121 GRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASG 1180
G + L + GR+ +V ++++ + KL Y++ +V+ L + + ++T G
Sbjct: 464 GTRESKALSMEGRVTFDVLQVLQRDYKLRSYSLNSVSANFLGEQKEDVHHSIITD-LQLG 522
Query: 1181 PGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLL 1240
++R R Y + A L L ++++L I E+ARV G+ F +LSRG Q +V S L+
Sbjct: 523 NDQSRRRLAVYCMKDAYLPLRLLDKLMCIVNYIEMARVTGVPFSYLLSRGQQIKVVSQLM 582
Query: 1241 RLAHTQNYLAISPGNHQVASQPAMECLPLVMEPES------------------------- 1275
R H + I P AS+ E V+EP+
Sbjct: 583 R--HAGEHDLIIPVMDSQASEEQYEG-ATVIEPKRGDILSCFLGAGLGHDLNTCGGGLDI 639
Query: 1276 -------GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHV 1328
G+Y P+ LDF SLYPS+M A+NLC+ T + D V
Sbjct: 640 RFNARPIGYYDIPIATLDFSSLYPSIMQAHNLCYTTLV-----------------KDKSV 682
Query: 1329 LRDLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR-I 1386
L +LK DE + P G +V VR+G+LP++L +L R K+A K L + R +
Sbjct: 683 LGNLKPDEYIRTPTGDHFVKTNVRQGLLPQILTSLLDAR---KRAKKDLKNEKDPFRRSV 739
Query: 1387 FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK-- 1444
N RQLALK+ AN YG+T A G++PC E++ S+ GR +E+ V E+
Sbjct: 740 LNGRQLALKISANSVYGFTGATV-GKLPCLEISSSVTAFGRQMIEQTRQKVEEHYSIANG 798
Query: 1445 ----AKVIYGDTD 1453
A+V+YGDTD
Sbjct: 799 YSHDAEVVYGDTD 811
Score = 41.2 bits (95), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P S + + +D Y+ P+ S++ G + + V ++R++G T G LH+H
Sbjct: 65 PASEALIFQQLELDSYLGSPV-------SNMPGPQTDTVQIVRMFGVTAKGNSVMLHVHG 117
Query: 66 ALPYLY 71
PYLY
Sbjct: 118 FAPYLY 123
>gi|443924628|gb|ELU43623.1| DNA polymerase delta catalytic subunit [Rhizoctonia solani AG-1 IA]
Length = 1003
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 226/523 (43%), Gaps = 100/523 (19%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSES--HQRSLV 1014
L +LS +++ R + P+ D + ++I ++ + ES R++
Sbjct: 307 LRILSFDIECAGRKGIFPEASIDPV--------------IQIANMVTVQGESSPFVRNVF 352
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILC------SFDPDILMGWDIQGGSLGFLAERAA---- 1064
+ DC V S I + +L DPD+++G++I L +L +RA
Sbjct: 353 TLDDCAHIVGSDVISFKNEDAMLLAWRAFVEEVDPDVVIGYNIANFDLPYLLDRARALKG 412
Query: 1065 ------HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED 1118
HLG K D+ S +
Sbjct: 413 ASDGFPHLG------------HYKTTTKDTHFSSKA------------------------ 436
Query: 1119 EWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA 1178
+G+ + + GR+ L++ + M+ E KL YT+ AV L + + V+T
Sbjct: 437 -FGQRDSKETQLNGRLQLDMLQYMQREQKLRSYTLNAVCAHFLGEQKEDVHHSVITD-LQ 494
Query: 1179 SGPGRARYRCVEYV--VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVE 1236
+G R R Y V A L +M++L +E+ARV G+ F +L +G Q +V
Sbjct: 495 NGNAETRRRLAVYCLKVWDAYLPQRLMDKLMCFVNYTEMARVTGVPFNYLLQKGQQIKVI 554
Query: 1237 SMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMI 1296
S L R A+ Y+ + A + C V+EP+ G+Y P+ LDF SLYPS+M+
Sbjct: 555 SQLYRKANADGYVI----PNMKAEGMGILC-ATVIEPKRGYYDVPIATLDFSSLYPSIMM 609
Query: 1297 AYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLP 1356
A+NLC+ T L K + + ++ + PN +V K RKG+LP
Sbjct: 610 AHNLCYTTLLYKETIEQHGLVK--------------GEDYIQTPNNDFFVTAKRRKGLLP 655
Query: 1357 RLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCA 1416
+LE++++ R K +KK + + + RQLALK+ AN YG+T A GR+PC
Sbjct: 656 TILEDLIAARKRAKADLKK--ETDPFKRAVLDGRQLALKISANSVYGFTGATI-GRLPCL 712
Query: 1417 ELADSIVQCGRSTLEKAISFV------NENEKWKAKVIYGDTD 1453
++ S+ GR +E+ V N + A+VIYGDTD
Sbjct: 713 AISSSVTAYGREMIERTKHEVETEYCINNGREHDAEVIYGDTD 755
>gi|429965585|gb|ELA47582.1| DNA polymerase (pol2) [Vavraia culicis 'floridensis']
Length = 1168
Score = 160 bits (404), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 247/565 (43%), Gaps = 101/565 (17%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+LS +++ +R + PD D I + ++ E ++C QR+ GI
Sbjct: 217 FKILSFDLEVNNRENKFPDSSIDEIIQIG-----NTVKQHEYKQTIFC-----QRNTAGI 266
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI-------- 1068
V E + +IK + DPD+ +G++I G ++ R LG+
Sbjct: 267 AGVDVRSYDTEREMIEEWIKFVYYEDPDVFLGYNISGFDFDYIIGRVRKLGVPFCLCRLY 326
Query: 1069 -----------------GLLNDISR--TPLESKIAAGD---SEISERGITDNMLAEPV-- 1104
+L D+++ T L K G +E S T M E V
Sbjct: 327 IDPSKDDTIARAIDTSARMLRDVAKNETNLRLKQEIGQVVKNETSAVLETSKMGREEVNR 386
Query: 1105 VAESLLA---------------KDAIIEDEWGRTHA---------SGLHVGGRIVLNVWR 1140
A ++L+ DAI +D++G + + H GRIV+++
Sbjct: 387 TASNVLSGIESKGGRFATEHVMYDAI-KDKFGECKSCNNTRKEMFNDFH--GRIVVDMLT 443
Query: 1141 LMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNL 1200
+++ E KL YT+ V+ L + +P+ ++ F G + R R Y + L L
Sbjct: 444 VIKKEHKLRSYTLNNVSVHFLGMQKEDLPYYLIKGLF-DGDDKTRRRIAVYCLKDTLLPL 502
Query: 1201 EIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVAS 1260
I +L + E+ RV G+ +RG ++ ++LR A ++ N V
Sbjct: 503 LIYEKLLIFITGVEMVRVLGVPIHWHFNRGISVKIFGLILREARKNGFVI---PNVTVKD 559
Query: 1261 QPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVS 1320
+ M V+EPE G+Y +P+ VLDF SLYPS++IA+NLC+ T L LG
Sbjct: 560 EGYMG--AFVIEPERGYYDEPIAVLDFASLYPSIIIAHNLCYSTML----------LGTK 607
Query: 1321 SFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ 1380
H + KD I P G +V VR G+LP +LE++L R VK+ +K +
Sbjct: 608 ------HGIDKSKDA-EISPTGTYFVKKDVRVGLLPVILEKMLKKRKEVKEQMKN--ETN 658
Query: 1381 QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV--- 1437
+ + NARQ A K+ AN YG+T + S R+PC +++ S+ GR + K + V
Sbjct: 659 TFMRTLLNARQNAFKVSANSVYGFTGSAVS-RLPCIDISQSVTGYGREMIIKTKNVVESV 717
Query: 1438 ---NENEKWKAKVIYGDTDRYTVCI 1459
++ + +VIYGDTD + I
Sbjct: 718 FCRDKGYDFDGRVIYGDTDSVMIRI 742
>gi|354497678|ref|XP_003510946.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cricetulus
griseus]
Length = 1070
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 216/509 (42%), Gaps = 106/509 (20%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ R + P+P D I + +L + + + + + L R
Sbjct: 306 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 357
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
I KV +E L + + + DPD++ G++IQ L +L RA L +
Sbjct: 358 PILGAKVQSYEREEDLLQAWANFILAMDPDVITGYNIQNFDLPYLISRAQTL------KV 411
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
R P ++ S I + + GR + + + GR
Sbjct: 412 DRFPFLGRVTGLRSNIRDSSFQSRQV--------------------GRRDSKVVSMVGR- 450
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
V+++M T+ T W + R R Y +
Sbjct: 451 -----------VQMDMLTLLG------------------TNWKE----QTRRRLAVYCLK 477
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AI 1251
A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A Q L
Sbjct: 478 DAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMRQGLLMPVVK 537
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
+ G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P
Sbjct: 538 TEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RP 587
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG+ DE + P G +V VRKG+LP++LE +LS R K+
Sbjct: 588 GAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQILENLLSAR---KR 632
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A +LA L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +
Sbjct: 633 AKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMI 691
Query: 1431 EKAISFVNENEKWK------AKVIYGDTD 1453
EK V + AKV+YGDTD
Sbjct: 692 EKTKQLVESKYTLENGYNANAKVVYGDTD 720
Score = 47.0 bits (110), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 75/198 (37%), Gaps = 52/198 (26%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGG---KVNEVPVIRVYGSTPAGQKTCLH 62
P++ + + IDHY+ +P L GG N VP++R +G T G C H
Sbjct: 85 PNTEPLIFQQLEIDHYVGSAVP--------LPGGPPTSCNSVPILRAFGVTDEGFSVCCH 136
Query: 63 IHRALPYLYVPC---------------------------------ADIPVQL--RQEDDG 87
IH PY Y P A + ++L R+ G
Sbjct: 137 IHGFAPYFYTPAPPGFGAEHLSDLQRELSTAISRDQRGGKELSGPAVLAIELCSRESMFG 196
Query: 88 YM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFL 146
Y H S L L + R+ + + +R G S P+E+++ F ++F+
Sbjct: 197 YHGHGPSPFLRITLALPRLVAPARRLLEQG--IRVPGLGT---PSFAPYEANVDFEIRFM 251
Query: 147 VDYNLYGMGHLHLSKLKF 164
VD ++ G L L K+
Sbjct: 252 VDADIVGCNWLELPAGKY 269
>gi|81157941|dbj|BAE48221.1| DNA polymerase delta subunit [Chlorella pyrenoidosa]
Length = 1087
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/515 (26%), Positives = 227/515 (44%), Gaps = 75/515 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAVEIYVLLYCKSESHQRSLVG 1015
+LS++++ + R P+P D I V +L E + K+ R+++
Sbjct: 294 FRILSVDIECQGRKGHFPEPDKDPVIQVASLVTE-------------FGKATPTVRNIMT 340
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSF-------DPDILMGWDIQGGSLGFLAERAAHLGI 1068
+ C + E+ F H +L + DPDI++G++I L +L RA L I
Sbjct: 341 LKSCAP-ISGAEVMSFEHEKDLLLRWRDLVLETDPDIIIGYNIVNFDLPYLLNRADTLKI 399
Query: 1069 GLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGL 1128
R + D+ S + +G +
Sbjct: 400 PQFWTWGRM-RNRRCKMKDARFSSKA-------------------------YGTHDFKEI 433
Query: 1129 HVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRC 1188
+ GR+ ++ + ++ + KL+ Y++ +V+ L + + ++K G +R R
Sbjct: 434 TIEGRVQFDLLQAIQRDHKLSSYSLNSVSAHFLGEQKEDVHHSDISK-LQDGNAESRRRL 492
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
Y + A L ++++L ++ E+ARV G+ +L+RG +V S +LR + T+
Sbjct: 493 AIYCLKDAYLPQRLVDKLMLMYNYVEMARVTGVPMSYLLARGQSIKVFSQILRKSRTKGL 552
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
+ + A + V+EP +G+Y PV LDF SLYPS+M+A+NLC+ T L K
Sbjct: 553 VVPNMKRGGDAGEGVAYEGATVLEPRAGYYDRPVATLDFASLYPSIMMAHNLCYTTLLPK 612
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
G P H L PN ++V P + GVLP +L+E+L+ R
Sbjct: 613 ---------GQEKMFPSEH--------LTFTPNNDVFVKPSLAMGVLPEILQELLTARKR 655
Query: 1369 VKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K+ ++ + L ++N RQLALK+ AN YG+T A G +PC E++ S+ GR
Sbjct: 656 AKKDME--TATDPFLRAVYNGRQLALKVSANSVYGFTGATV-GALPCLEISSSVTSFGRE 712
Query: 1429 TLEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
+ + V E A+VIYGDTD V
Sbjct: 713 MIMETRRRVQERYCKANGYSHDAEVIYGDTDSVMV 747
>gi|428673126|gb|EKX74039.1| DNA polymerase delta catalytic subunit, putative [Babesia equi]
Length = 1030
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 208/423 (49%), Gaps = 59/423 (13%)
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLA 1101
DPD + G++I + +L RA+ L + + + R
Sbjct: 351 DPDFVTGYNIINFDIPYLITRASVLNLERFSQLPR------------------------- 385
Query: 1102 EPVVAESLLAKDAIIEDE-WGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+ + KDAI+ + G +++ GRI+ +V+ L+R + KL YT+ V+
Sbjct: 386 --IKKQMTTFKDAIVSNNIMGTYENKDINIEGRILFDVYDLVRRDHKLKSYTLNYVSFEF 443
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L+++ + + + K G R R Y + L L ++ +L ++ E+ARV
Sbjct: 444 LKQQKEDVHYSTIAK-LQLGSSADRRRIASYCLKDGILPLLLIEKLLLLYNYVEMARVTS 502
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLA--ISPGNHQVASQPAMECLPLVMEPESGFY 1278
++SRG Q RV + R Y +S G+ +++ E V++P+ G++
Sbjct: 503 TPIKMLISRGQQIRVTMQIYRQCKIMRYAVPVLSTGSRNASNEAGYEG-GTVLDPQRGYH 561
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLI 1338
P+ VLDFQSLYPS+MIA+NLC+ T ++P+ E V + P+ HV R +
Sbjct: 562 KQPIAVLDFQSLYPSIMIAHNLCYST----LIPTSE----VDKYPPE-HVTR-------V 605
Query: 1339 PPN-GVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP-SQQILHRIFNARQLALKL 1396
P + G+ ++ VR GVLP ++ ++ R K+A K +A + +L +++ RQLALK+
Sbjct: 606 PGHEGLCFIKSSVRTGVLPIIVSNLIEAR---KRAKKLMASCTDPMLKSVYDGRQLALKI 662
Query: 1397 IANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL---EKAIS--FVNENEKW-KAKVIYG 1450
N YGYT A G +PC E+A +I GRS + +++I F EN AKV+YG
Sbjct: 663 TTNSVYGYTGAASGGFLPCVEVATAITSFGRSMILNTKQSIESHFTAENGYIANAKVVYG 722
Query: 1451 DTD 1453
DTD
Sbjct: 723 DTD 725
>gi|300707422|ref|XP_002995919.1| hypothetical protein NCER_101069 [Nosema ceranae BRL01]
gi|239605160|gb|EEQ82248.1| hypothetical protein NCER_101069 [Nosema ceranae BRL01]
Length = 977
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 217/472 (45%), Gaps = 73/472 (15%)
Query: 992 SDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDI 1051
SD +I +++C E+ IP V + + L + + +PD+++G+++
Sbjct: 229 SDDPSKIEQVIFCLKET-----AAIPGAIVRSFNTKKDLLIAWKEYFIDQNPDLILGYNL 283
Query: 1052 QGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLA 1111
+G + ++ ER L I N + RT K A
Sbjct: 284 KGFDIPYILERGTTLNIEDFNKLGRTQKPCK----------------------------A 315
Query: 1112 KDAIIED-EWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPF 1170
KDA+ + G + + GRIV ++ +++R E KL Y++ +V+ L+ + +P
Sbjct: 316 KDAVFSSRQVGSLSTPEITIEGRIVFDLMQIIRREHKLRSYSLNSVSLHFLQEQKEDVPH 375
Query: 1171 RVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI--DFFSVLS 1228
+ G R R Y + L L + N+L+++ +ELARV G+ ++FS S
Sbjct: 376 NSMHD-LQEGNKDTRKRIASYCLKDTILPLRLFNKLNILINYTELARVMGVPLEYFS--S 432
Query: 1229 RGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQ 1288
RG +V +++ R A +YL P + E VM+P GFY P+ VLDF
Sbjct: 433 RGVGIKVLTLIYRAAAENDYLI--PVLDVEDNDSTYEG-GFVMDPMRGFYPQPIAVLDFS 489
Query: 1289 SLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPP 1348
SLYPS+MI+ NLC+ T L K + + G + P +V
Sbjct: 490 SLYPSIMISRNLCYSTLLTK---EQYDKFGGTK-----------------TPTNNYFVDS 529
Query: 1349 KVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAG 1408
KV++G+LP++L +L++R K+ + A S + NARQ A+K+ AN YG+T A
Sbjct: 530 KVKQGLLPKVLINLLASRKATKKEMN--AESDPGIKACLNARQTAIKVCANSIYGFTGAN 587
Query: 1409 FSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAK-------VIYGDTD 1453
+G++PC E++ S GR + + + E+ K K VIYGDTD
Sbjct: 588 -TGKLPCVEISQSTTSFGREMIAFTKNII-ESTFCKEKGYSHDSIVIYGDTD 637
>gi|440293443|gb|ELP86560.1| DNA polymerase delta catalytic subunit, putative [Entamoeba invadens
IP1]
Length = 1078
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 236/553 (42%), Gaps = 89/553 (16%)
Query: 940 LSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAVE- 997
L +GF + A L + S +++ S P P DS I + E S+ +
Sbjct: 241 LVNLGFTGEYTRMA--PLRICSFDIECVSAKGTFPVPEKDSVIQIANYVVELGSEKVINK 298
Query: 998 -IYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSL 1056
++VL C IP +F E L + + D DI G++I
Sbjct: 299 NVFVLKGCTP---------IPGATIFGFDTEEELLKGWSDFVNDIDVDIFTGYNIMNFDF 349
Query: 1057 GFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAII 1116
+L RA L + SR +S + + + E + E
Sbjct: 350 NYLITRANTLKVKDFGRFSRLR-KSNVTMKQGTFQSKAVGTRESFELIGLE--------- 399
Query: 1117 EDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKW 1176
GRI +++++++ + KL YT+ V+ L + + + +
Sbjct: 400 ---------------GRIPFDMFQVIQRDYKLRSYTLNFVSSNFLGDQKEDVHYSDIADL 444
Query: 1177 FASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVE 1236
P R R Y + L + ++ +L + E+ RV GI +L RG Q +V
Sbjct: 445 HNGSPD-DRNRIAVYCLKDTYLPIRLIKKLMSLVNGVEMCRVTGIPLSYLLPRGQQVKVI 503
Query: 1237 SMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMI 1296
+ L R A+ +++L P + + + V+ P GFY DP+ VLDF SLYPS+MI
Sbjct: 504 TQLYRHANDKHFLI--PFYQRPSGEGDKYVGATVINPIKGFYRDPISVLDFSSLYPSIMI 561
Query: 1297 AYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK----------------------- 1333
++NLC+ T + GV + R D+ + DLK
Sbjct: 562 SHNLCYSTLIE----------GVKT-RVDVKNIEDLKTSGEQSDKNAYDQIVKKCLEKHL 610
Query: 1334 --DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ-QILHRIFNAR 1390
D++ + PNG ++V +KG+LP +LE +L+ R KQA K +A + + ++ N R
Sbjct: 611 SLDDVELSPNGDLFVRSNKQKGILPEILENLLAAR---KQAKKDMAAEKDEFKIKVLNGR 667
Query: 1391 QLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK------ 1444
QLALK+ AN YG+T A G++PC ++A S+ GR+ +E + V + K
Sbjct: 668 QLALKISANSVYGFTGAQV-GKLPCMQIASSVTSYGRTMIELTKNTVETHYSIKNGFAYD 726
Query: 1445 AKVIYGDTDRYTV 1457
AKV+YGDTD V
Sbjct: 727 AKVVYGDTDSVMV 739
>gi|328855214|gb|EGG04342.1| hypothetical protein MELLADRAFT_53062 [Melampsora larici-populina
98AG31]
Length = 1067
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 231/513 (45%), Gaps = 75/513 (14%)
Query: 959 LLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSES--HQRSLVGI 1016
+LS +++ R + P+ + D + ++I L+ C S R++ +
Sbjct: 273 VLSYDIECAGRKGIFPEAKIDPV--------------IQIANLVTCHGSSTPFIRNVFTL 318
Query: 1017 PDCKVFVCS------KEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C V S KE + + + + DPD+++G++ + +L +RA L +
Sbjct: 319 DTCAHIVGSQVIEFKKEEDMLAKWQLFVEECDPDLVIGYNTTNFDMPYLLDRAKALKVNT 378
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
+ R + D+ S + +G + H+
Sbjct: 379 FPQLGRMK-NIQTVVKDTHFSSKA-------------------------YGTRDSKETHL 412
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR+ L++ ++M+ + KL YT+ AV L + + ++T+ +G +R R
Sbjct: 413 DGRLQLDLLQVMQRDYKLRSYTLNAVCAQFLGEQKEDVHHTMITE-LQNGNSESRRRLAV 471
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + A L +M++L +E+ARV G+ F +LSRG Q +V S L R A +Y
Sbjct: 472 YCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFNYLLSRGQQIKVVSQLYRRAGEFSY-- 529
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
I P S + +VM+P G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 530 IVPAMKYEGSDDQFDG-AIVMDPIRGYYDVPIATLDFASLYPSIMMAHNLCY-TTLTDAK 587
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
+K+ LG+ ++ +I PNG +V RKG+L +LE++LS R +
Sbjct: 588 TAKQ--LGLVE-----------NEDYIITPNGDYFVKTSKRKGLLAIVLEDLLSARKRAR 634
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+K + + + RQLALK+ AN YG+T A G++PC + S+ GR +
Sbjct: 635 AELK--LETDPFKKAVLDGRQLALKVSANSVYGFTGATV-GKLPCLPIPMSVTAFGREMI 691
Query: 1431 -----EKAISFVNEN-EKWKAKVIYGDTDRYTV 1457
E ++ N + A+VIYGDTD V
Sbjct: 692 KTTKAEVEATYTKANGYEHDAQVIYGDTDSVMV 724
>gi|167380902|ref|XP_001735501.1| DNA polymerase delta catalytic subunit [Entamoeba dispar SAW760]
gi|165902501|gb|EDR28305.1| DNA polymerase delta catalytic subunit, putative [Entamoeba dispar
SAW760]
Length = 1077
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 143/526 (27%), Positives = 230/526 (43%), Gaps = 67/526 (12%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R P P D + +A + F ++VL C
Sbjct: 257 LRILSFDIECAGRKGSFPVPELDPVIQIANYVVEFGKPDIITKNVFVLKGCSP------- 309
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
IP ++ E L + + + D D+ G++I +L ERA L +
Sbjct: 310 --IPGAIIYDYDTEEELLKGWSDFINAIDVDVFTGYNIMNFDFKYLLERAKVLKV----- 362
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
S S +S R T A V R +++ GR
Sbjct: 363 ---KDFSSFSKLKSSHVSVRQSTFQSKAVGV-----------------RESNELINLEGR 402
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I +++++++ + KL YT+ V+ L + + + +T G R R Y +
Sbjct: 403 IPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQKEEVHYADITT-LHEGSMDDRNRIAVYCL 461
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
L ++++ +L + E+ RV GI +L RG Q +V + L R A+ + P
Sbjct: 462 KDTYLPIKLLEKLMSLVNGFEMCRVTGIPLSYLLPRGQQVKVITQLYRHANAKKLFI--P 519
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI---- 1309
+ + V+ P GFY P+ LDF SLYPS+MI++NLC+ T + I
Sbjct: 520 FFQRTKTNGDKYVGATVISPIKGFYKVPISTLDFSSLYPSIMISHNLCYSTLIDGIKTRK 579
Query: 1310 -LPSKENTLGVSSFRPDL----HVLRDLKDELL------IPPNGVMYVPPKVRKGVLPRL 1358
+PS E L S D +++ LK++ L + PNG ++V RKG+LP +
Sbjct: 580 DVPSIE-FLKTSESEEDRKMYDQIMKKLKEKQLNVEDVELSPNGDLFVKSSKRKGILPEI 638
Query: 1359 LEEILSTRIMVKQAIKKLAPSQQILH-RIFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
LE +L+ R KQA K +A + + N RQLALK+ AN YG+T A G++PC +
Sbjct: 639 LENLLAAR---KQAKKDMAAATDPFKITVLNGRQLALKVSANSVYGFTGAQI-GKLPCMQ 694
Query: 1418 LADSIVQCGRSTLEKAISFVNENEK------WKAKVIYGDTDRYTV 1457
+A S+ GR+ +E + V E W A+V+YGDTD V
Sbjct: 695 IASSVTSYGRTMIELTKTTVEEKYSKKNGFPWDAQVVYGDTDSVMV 740
>gi|313225943|emb|CBY21086.1| unnamed protein product [Oikopleura dioica]
Length = 1062
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 237/507 (46%), Gaps = 70/507 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+ + S +++ R + P+ +D + +A +N D + + ++ S S +VG
Sbjct: 267 MRIFSYDIECAGRKGVFPEAEHDPVIQIACMVQNQGDPSPFVRMIFTLNSCS---PIVG- 322
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL---GIGLLND 1073
VF KEI + F +++ DPDI+ G++I +L RA L G L
Sbjct: 323 --NHVFCYEKEIDMLEGFAELMRLVDPDIITGYNIMNFDTSYLVNRANTLKSQNFGYLGR 380
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
I R+ L SK+ D++ S + + G +++ GR
Sbjct: 381 I-RSNL-SKVK--DAKFSSK-------------------------QMGTREYKEVNIDGR 411
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I L+V + KL Y + AV+ L+ + + +++ +G R R Y +
Sbjct: 412 IQLDVMVSIVQNYKLRSYNLNAVSYHFLKEQKEDVHHSIISD-LQAGTDSDRRRLAVYCL 470
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L +M++L + T E+ARV GI +L+RG +V + LLR + ++ +
Sbjct: 471 KDALLPLRLMDKLMFVVNTMEMARVTGIPLSYLLTRGQSVKVMAQLLRESSIRDLVMPVL 530
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
Q V++P G+Y +P+ LDF SLYPS+M A+NLC+ T L ++
Sbjct: 531 KTEQSDQYEG----ATVIDPIRGYYKEPITTLDFASLYPSIMRAHNLCYTTLLSN--KNE 584
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+ L S F + P G +V P+VR+G+LP +L+ +L R K+ +
Sbjct: 585 RSKLDTSQF--------------IKTPTGDEFVKPEVREGLLPLILKNLLEARGKAKKEL 630
Query: 1374 K-KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
K + P ++ ++ + RQLALK+ AN YG+T A G++PC ++ S+ GR +E+
Sbjct: 631 KIEQCPFKK---KVLDGRQLALKISANSVYGFTGAQV-GKLPCLPISGSVTAFGRLMIEQ 686
Query: 1433 AISFVNENE------KWKAKVIYGDTD 1453
+ V E+ + AKV+YGDTD
Sbjct: 687 TMKTVEEHYTRANGFEHDAKVVYGDTD 713
>gi|332028725|gb|EGI68756.1| DNA polymerase delta catalytic subunit [Acromyrmex echinatior]
Length = 1010
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 166/319 (52%), Gaps = 28/319 (8%)
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMN 1204
+ KL YT+ AV+ L+ + + + +T +G + R R Y + A L L +++
Sbjct: 372 DYKLRSYTLNAVSYHFLQEQKEDVQHKDITG-LQNGNAQTRRRLAVYCLKDAYLPLRLLD 430
Query: 1205 QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAM 1264
+L I E+ARV G+ S+L+RG Q +V S LLR ++YL H Q
Sbjct: 431 KLMCIIIYMEMARVTGVSISSLLTRGQQIKVVSQLLRKTREKDYLMPVHQGHGTDEQFEG 490
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRP 1324
V+EP+ G+Y DP+ LDF SLYPS+++A+NLC+ T L +K+ L +
Sbjct: 491 AT---VIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLLT---IAKKKELNIQ---- 540
Query: 1325 DLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILH 1384
+D++ P+ +++ VRKG+LP +LE +L R K +K+ + +
Sbjct: 541 --------EDQITTTPSKSLFIKNSVRKGILPEILENLLVARKKAKTELKQ--ETDPLKQ 590
Query: 1385 RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN---- 1440
++ + RQ ALK+ AN YG+T A G++PC E++ S+ GR+ +E+ V ++
Sbjct: 591 KVLDGRQYALKVSANSVYGFTGAQM-GKLPCLEISASVTAYGRTMIEQTKQEVEDHFRIE 649
Query: 1441 --EKWKAKVIYGDTDRYTV 1457
K A VIYGDTD V
Sbjct: 650 NGYKNDAMVIYGDTDSVMV 668
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 39/185 (21%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHR 65
P + S + + IDHY+ P+PG + G KV VP++R++G T G C H+H
Sbjct: 75 PKVDTLSFQQIEIDHYIGKPLPG-------MPGSKVGPVPIMRMFGVTEQGNSVCCHVHG 127
Query: 66 ALPYLYV------------PCADIPVQLRQED-----DGYMHAISLALEKALK--VKGSA 106
PYL+V P + Q ++D D AI LA+E K + G
Sbjct: 128 FCPYLFVSAPSNFTNDHCKPFKEALNQAVKKDMKSNPDNIQDAI-LAVELVYKQSMYGYG 186
Query: 107 GSKR-----------QHVHECS-LVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGM 154
G+ + + + C L+ F+ + ES+I F ++F+VD ++ G
Sbjct: 187 GNDKLPFLKITVAVPKLIAPCKRLLEQDTVYTAFNYHYRAFESNIDFDIRFMVDTSVVGC 246
Query: 155 GHLHL 159
+ L
Sbjct: 247 SWIEL 251
>gi|341904443|gb|EGT60276.1| hypothetical protein CAEBREN_32385 [Caenorhabditis brenneri]
Length = 1042
Score = 157 bits (396), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 234/530 (44%), Gaps = 90/530 (16%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSL 1013
L LS++++ R + P+ D I +A + E +S+ V +VL C +
Sbjct: 294 LRTLSLDIECIGRRGIFPEAIKDPIIQIANLVKIEGESEPFVRNCFVLGTCAP------V 347
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG + C E L + + + DPDI+ G++I L ++ +RA L + ++
Sbjct: 348 VG---SNIIQCVNEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKVLSLPQVSH 404
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R ++G S++ AI + G + + GR
Sbjct: 405 LGRQ-------------RDKG-------------SIVRDAAISSKQMGSRVNKSIDIHGR 438
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I+ +V +++ + KL YT+ +V+ L + + ++ G + R R +Y +
Sbjct: 439 IIFDVLQVVLRDYKLRSYTLNSVSYQFLSEQKEDVEHNIIPD-LQRGDEQTRRRLAQYCL 497
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRV----------------ES 1237
A L L ++++L I E+ARV G+ +L++G Q +V S
Sbjct: 498 KDAYLPLRLLDKLMSIINYIEMARVTGVPMNFLLTKGQQIKVFLNPDFSHHFVFALQILS 557
Query: 1238 MLLRLAHTQN-YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMI 1296
M+LR N +L + N E V+EP GFY +P+ LDF SLYPS+MI
Sbjct: 558 MMLRRCKQNNFFLPVIEANS--GDGEGYEG-ATVIEPIRGFYNEPIATLDFASLYPSIMI 614
Query: 1297 AYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLP 1356
A+NLC+ T L K EN ++ + P+G + R+G+LP
Sbjct: 615 AHNLCYTTLL-KAPQGVEN------------------EDYIRTPSGQYFATKSKRRGLLP 655
Query: 1357 RLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCA 1416
+LE+IL+ R K +K + ++N RQLALK+ AN YG+T A G++PC
Sbjct: 656 EILEDILAARKRAKNDMKN--EKDEFKRMVYNGRQLALKISANSVYGFTGATV-GKLPCL 712
Query: 1417 ELADSIVQCGRSTLEKAISFVNENEK---------WKAKVIYGDTDRYTV 1457
E++ S+ GR ++ S V K AKVIYGDTD V
Sbjct: 713 EISQSVTAFGRKMIDMTKSEVERIYKKGALDGKCPADAKVIYGDTDSVMV 762
>gi|410054333|ref|XP_003316601.2| PREDICTED: DNA polymerase delta catalytic subunit, partial [Pan
troglodytes]
Length = 648
Score = 156 bits (395), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 135/472 (28%), Positives = 217/472 (45%), Gaps = 73/472 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFE-NDSDHAVEIYVLLYCKSESHQRSLV 1014
L +LS +++ + P+P D I + +L + + + + + L R
Sbjct: 223 LRVLSFDIECAGHKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL--------RPCA 274
Query: 1015 GIPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
I KV KE + +S FI+I+ DPD++ G++IQ L +L RA L
Sbjct: 275 PILGAKVQSYEKEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTL----- 326
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
+ P ++A S I + + GR + +
Sbjct: 327 -KVQTFPFLGRVAGLRSNIRDSSFQSK--------------------QTGRRDTKVVSMV 365
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GR+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 366 GRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVY 424
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 425 CLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMP 484
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 485 VVKSEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL-- 535
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 536 -RPGTAQKLGLT------------EDQFIRTPTGDEFVKTSVRKGLLPQILENLLSAR-- 580
Query: 1369 VKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
K+A +LA L R + + RQLALK+ AN YG+T A G++PC E++
Sbjct: 581 -KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEIS 630
Score = 43.9 bits (102), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG VPV+R +G T G C
Sbjct: 1 DPQTEPLIF--QQLEIDHYVGPAQPVPGGP-------PPSRGSVPVLRAFGVTDEGFSVC 51
Query: 61 LHIHRALPYLYVPC 74
HIH PY Y P
Sbjct: 52 CHIHGFAPYFYTPA 65
>gi|325193152|emb|CCA27509.1| predicted protein putative [Albugo laibachii Nc14]
Length = 1084
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 232/513 (45%), Gaps = 70/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAV---EIYVLLYCKSESHQRSL 1013
+LS +++ R P+ +D I +A + A+ ++VL CK +
Sbjct: 284 FRVLSFDIECMGRKGHFPEAEHDPIIQIANIVQEQGSPALLFRNVFVLGTCKP------I 337
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG + + ++ F+++ DPDI+ G+++ + ++ R L + +
Sbjct: 338 VGTSVMEFVREEDMLERWAAFVRLA---DPDIITGYNVDNFDIPYILNRGKSLKLSEFDQ 394
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ R L SK A + K ++G++ + + GR
Sbjct: 395 LGR--LLSKSA------------------------FMEKKTFSSAQYGKSESIKTTIHGR 428
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+++ +MR +L+ Y++ AV+ L ++ +P+ +++ G R+R Y +
Sbjct: 429 CTFDLYPIMRRSFQLSSYSLNAVSSAFLGQQKEDVPYGIISD-LQRGTDDDRHRLAVYCL 487
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L++++ L ++ E+ARV G+ +L RG Q +V SMLLR N L +
Sbjct: 488 KDASLPLQLLHNLSLLVNYIEMARVCGVPIDYLLERGQQIKVYSMLLRKCKGANLLVPTL 547
Query: 1254 GNHQVA-SQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
Q A S A V+EP +Y P+ LDF SLYPS+M A+NLC+ T +
Sbjct: 548 QRSQNANSGDAGYEGATVIEPIKAYYTVPIATLDFASLYPSIMQAHNLCYSTLVAPNDVD 607
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
K N L + P+G ++V RKG+LP ++EE+LS R KQA
Sbjct: 608 KLNPLQYQT-----------------SPSGDVFVKADTRKGILPMIIEELLSAR---KQA 647
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL- 1430
++ + + + + N RQLALK+ AN YG+T A G++PC +A SI GR L
Sbjct: 648 KYDMSRATDPMEKAVQNGRQLALKISANSVYGFTGA-VVGQLPCIPIASSITAYGRQFLF 706
Query: 1431 ------EKAISFVNENEKWKAKVIYGDTDRYTV 1457
E+ N A+VIYGDTD V
Sbjct: 707 QTKEEVERQFCVAN-GYPADAQVIYGDTDSVMV 738
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 74/191 (38%), Gaps = 43/191 (22%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEV-PVIRVYGSTPAGQKTCLHIH 64
P ++ + + +D Y P+ S + K N++ PVIRVYG G LH+H
Sbjct: 61 PKTSSIDFQWIDVDMYDRQPLQFRTETGSKVYAEKSNQLFPVIRVYGVNATGNSVVLHVH 120
Query: 65 RALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKKG 124
+PY Y C P E G + AL K L+ +G + +VR K
Sbjct: 121 GFMPYFYAAC---PENFDYEKCG---QVRQALNKTLESTMKSGPP--PIIGLEVVRNLKS 172
Query: 125 --GAVFD--------------------------------KSLQPHESHIPFLLQFLVDYN 150
G FD +S Q +ES++PFLL+F++D
Sbjct: 173 IYGFQFDFSMTVWKVYVSMPAFVPKVRSLLENGISLPGFRSYQTYESNVPFLLRFMIDKE 232
Query: 151 LYGMGHLHLSK 161
++G L K
Sbjct: 233 IHGCNWLQAPK 243
>gi|294935971|ref|XP_002781577.1| dna polymerase zeta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239892423|gb|EER13372.1| dna polymerase zeta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 369
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 149/291 (51%), Gaps = 49/291 (16%)
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
S E L +I FDP +++ WD + F+AERA LG+
Sbjct: 116 SCESELILALDRIFTQFDPTVVISWDASRRGIVFIAERARALGLP--------------- 160
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
AES+ + + G S L+ GRI L++W+ +R
Sbjct: 161 --------------------GAESMFHR-VFVPPVPGPLGPSTLY--GRITLDLWQTLRQ 197
Query: 1145 E--VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE---YVVGRAKLN 1199
E +KL T+ A+ +L +P IP +L +W+ C++ Y V L
Sbjct: 198 EDSLKLATTTLHGAAKQLLGLTLPRIPMWLLQEWWTDASC-----CIDAFKYTVRLCTLG 252
Query: 1200 LEIMNQLDMINRTSELARVFGI-DFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQV 1258
L++++ +++R SE+A V G+ D VL+RGSQYRVE +L R A + +S QV
Sbjct: 253 LQLLDASALLSRASEMASVLGMPDVEEVLTRGSQYRVECILHRAASRTGFGLVSSSKAQV 312
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+QPA+E +P+V+EP SG+Y P ++LDFQSLYPS++IAYN+CF TCLG++
Sbjct: 313 KAQPALEGVPMVLEPRSGYYRTPTIILDFQSLYPSIIIAYNMCFSTCLGRV 363
>gi|323454621|gb|EGB10491.1| hypothetical protein AURANDRAFT_23037 [Aureococcus anophagefferens]
Length = 1057
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 224/510 (43%), Gaps = 53/510 (10%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +++ +++ R P+P D + ++ + V+ C+ I
Sbjct: 251 LRIMATDIECMGRKGHFPEPEKDPVIQISCVVQ------VQGAAQPMCQVIFTLDGCTAI 304
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E L + + DPDI+ G++ Q + +L +RA L
Sbjct: 305 NGAEVVTSKTEPELLKKWAAFVRLVDPDIITGYNTQNFDIPYLLKRAQTL---------- 354
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIED-EWGRTHASGLHVGGRIV 1135
+ A + SE G V+ +D I+ + G+ V GR++
Sbjct: 355 ----KRKDASLAAFSELG--------RVLGSHARMRDTSIQSAQMGKRENVETTVDGRVM 402
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ M KL+ Y++ +V L + + ++ G R R Y +
Sbjct: 403 FDLLPYMFRNHKLSSYSLNSVCAEFLGSQKEDVHHSIIAD-LQRGTDEDRRRLAVYCLKD 461
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
+ L +++M +L ++ E+ARV G+ +LSRG Q +V SMLLR N L +
Sbjct: 462 SYLVIQLMTKLAVLINYVEMARVTGVPLDFLLSRGQQIKVFSMLLRRCRASNLLVPNLAK 521
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
H E V+EP+ FY +P+ LDF SLYPS+M AYNLC+ T L K +
Sbjct: 522 HGNDGDAKFEG-ATVIEPKKAFYEEPIATLDFASLYPSIMQAYNLCYSTILTKQDAERHF 580
Query: 1316 TLGV-SSFRPDLHVLRDLKDELLIPPNGV-MYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
G ++++ + +GV +V K ++GVLP++L ++L+ R K +
Sbjct: 581 PGGADTAYQAGPQCV-----------DGVHHFVTAKTKRGVLPQILADLLAARKRAKADM 629
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
KK + + + N RQLALK+ AN YG+T A G++PC +A ++ GR+ L +
Sbjct: 630 KK--ATDPMDKAVQNGRQLALKISANSVYGFTGAAV-GQLPCLPIASTVTAYGRTLLHRT 686
Query: 1434 ISFVNENEKWK------AKVIYGDTDRYTV 1457
FV + A+V+YGDTD V
Sbjct: 687 KDFVESTYTKENGYAADAEVVYGDTDSVMV 716
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 88/214 (41%), Gaps = 22/214 (10%)
Query: 17 SIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCAD 76
SID Y P+ + + G + VPV+R+YG T G C H H PY + +
Sbjct: 29 SIDMYTGDPLATHPRQGQRVPGSRNRPVPVVRLYGVTGDGASVCAHCHGFTPYCF---SS 85
Query: 77 IPVQLRQEDDGYMHAISLALEKALKVKGSAGSKR---QHVHECSLVRAKK---------G 124
P+ + D G + + AL+ AL+ + S G R Q V +VR K+
Sbjct: 86 APLAFDESDAGNVAKLQQALDGALRQRCSRGQDRACAQLVLGVEVVRDKRSIMGYQPDGA 145
Query: 125 GAVFDKSLQPHESHIPFLLQFLVD-YNLYGMGHLHLSKLKFRHPVPDAFFPRKFNYSSKQ 183
A F K + IP L + L D N+ G+GH L F VP F +F ++
Sbjct: 146 RACFFKIYVALPTQIPALKKVLQDGVNVPGVGHSQLQ--TFESNVP---FILRFMIDNEI 200
Query: 184 ASADFQVIGCGSYPMHLMGHQIKTLSGLNIKVFL 217
++ G+Y G + KT L I V
Sbjct: 201 QGCNWVEAPAGAYAARSGGAK-KTRCDLEIDVVF 233
>gi|84998308|ref|XP_953875.1| DNA polymerase delta catalytic subunit (Pold1 ) [Theileria annulata]
gi|65304872|emb|CAI73197.1| DNA polymerase delta catalytic subunit (Pold1 homologue), putative
[Theileria annulata]
Length = 1088
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 220/448 (49%), Gaps = 54/448 (12%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
+ +C + E L + + DPD L G++I L +L R++ L I
Sbjct: 318 SLANCTILSFDNEEQLLLAWNDFVIFVDPDFLTGYNIILFDLPYLLTRSSVLNIE----- 372
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
+R ++I + + + +N+L G +++ GRI
Sbjct: 373 ARFKKLTRIKSVNCNFKDSISNNNIL--------------------GLYENKEINIEGRI 412
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
+ +V+ L+R + KL Y++ V+ L+++ + + + K F +G R R Y +
Sbjct: 413 LFDVYDLVRRDYKLKSYSLNYVSFEFLKQQKEDVHYSTILKLF-NGNNNDRRRIASYCLK 471
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--AIS 1252
+ L L ++N+L ++ E++RV +++RG Q RV + + NY+ I+
Sbjct: 472 DSILPLLLINKLLLLYNYIEMSRVTTTPIKLLITRGQQIRVTMQIYKQCKKMNYVIPVIT 531
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
G +++ + E V+EP G++ +P+ VLDFQSLYPS+MIA+N+C+ T
Sbjct: 532 GGGKNSSNENSYEG-ATVLEPLKGYHKNPISVLDFQSLYPSIMIAHNICYST-------- 582
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPP-NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
N ++++RP+ D + +P N + ++ RKG+LP ++E +++ R K+
Sbjct: 583 LLNYNNINNYRPE--------DVVRVPGYNDICFISVNKRKGILPIIVENLINERKKAKK 634
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+ + ++L ++++ RQLALK+ N YGYT A G +PC ++A +I GR+ +
Sbjct: 635 MMNEC--KDEMLKKVYDGRQLALKITTNSVYGYTGATSGGFLPCIDVATAITSFGRNMIV 692
Query: 1432 KAISFVNEN------EKWKAKVIYGDTD 1453
+ + E+ K+ +KVIYGDTD
Sbjct: 693 NTKNLIEEHFTVKNGFKFDSKVIYGDTD 720
>gi|313247101|emb|CBY35929.1| unnamed protein product [Oikopleura dioica]
Length = 852
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 237/507 (46%), Gaps = 70/507 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
+ + S +++ R + P+ +D + +A +N D + + ++ S S +VG
Sbjct: 267 MRIFSYDIECAGRKGVFPEAEHDPVIQIACMVQNQGDPSPFVRMIFTLNSCS---PIVG- 322
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL---GIGLLND 1073
VF KEI + F +++ DPDI+ G++I +L RA L G L
Sbjct: 323 --NHVFCYEKEIDMLEGFAELMRLVDPDIITGYNIMNFDTSYLVNRANTLKSQNFGYLGR 380
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
I R+ L SK+ D++ S + + G +++ GR
Sbjct: 381 I-RSNL-SKVK--DAKFSSK-------------------------QMGTREYKEVNIDGR 411
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
I L+V + KL Y + AV+ L+ + + +++ +G R R Y +
Sbjct: 412 IQLDVMVSIVQNYKLRSYNLNAVSYHFLKEQKEDVHHSIISD-LQAGTDSDRRRLAVYCL 470
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
A L L +M++L + T E+ARV G+ +L+RG +V + LLR + ++ +
Sbjct: 471 KDALLPLRLMDKLMFVVNTMEMARVTGVPVSYLLTRGQSVKVMAQLLRESSIRDLVMPVL 530
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
Q V++P G+Y +P+ LDF SLYPS+M A+NLC+ T L ++
Sbjct: 531 KTEQSDQYEG----ATVIDPIRGYYKEPITTLDFASLYPSIMRAHNLCYTTLLSN--KNE 584
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+ L S F + P G +V P+VR+G+LP +L+ +L R K+ +
Sbjct: 585 RSKLDTSQF--------------IKTPTGDEFVKPEVREGLLPLILKNLLEARGKAKKEL 630
Query: 1374 K-KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
K + P ++ ++ + RQLALK+ AN YG+T A G++PC ++ S+ GR +E+
Sbjct: 631 KIEQCPFKK---KVLDGRQLALKISANSVYGFTGAQV-GKLPCLPISGSVTAFGRLMIEQ 686
Query: 1433 AISFVNENE------KWKAKVIYGDTD 1453
+ V E+ + AKV+YGDTD
Sbjct: 687 TMKTVEEHYTRANGFEHDAKVVYGDTD 713
>gi|451845686|gb|EMD58998.1| hypothetical protein COCSADRAFT_153806 [Cochliobolus sativus ND90Pr]
Length = 1115
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 143/513 (27%), Positives = 236/513 (46%), Gaps = 70/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+ D + NVV + +D ++ L +
Sbjct: 309 LRILSFDIECAGRKGVFPEANVDPVIQIANVVT-KYGDDKPFVRNVFCL---------DT 358
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+ I ++ E + + L DPD+++G++ +L +RA HL
Sbjct: 359 VSPIVATQILSFQDEGEMLMKWRDFLDEVDPDVIIGYNTSNFDFPYLLDRAKHL------ 412
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ R P S++ S++ + + G + G
Sbjct: 413 KLQRFPYWSRLKTVQSKVEISNFSSKQM--------------------GSRDTKTTNTNG 452
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ +L++ + +L YT+ +V L+ + + ++T+ F +G +R R Y
Sbjct: 453 RLQLDLLQLVQRDHQLRSYTLNSVCAHFLKEQKEDVHHSMITELF-NGDSNSRRRLAVYC 511
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L ++++L + +E+AR G+ F +LSRG Q R S L R A ++ L I
Sbjct: 512 LKDAYLPQRLLDKLMCLVNYTEMARATGVPFNYILSRGQQVRFISQLFRKA-LEHQLVIP 570
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
+Q + E V+EP+ G+Y +PV LDF SLYPS+M A+NLC+ T L
Sbjct: 571 DLPNQGDTGDQYEG-ATVIEPKRGYYKEPVATLDFASLYPSIMQAHNLCYTTWLD----- 624
Query: 1313 KENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
R + L+ KDE ++ PNG M+ K RKG+L +LEE+LS R K+
Sbjct: 625 ----------RQTVEKLKMKKDEDYIVTPNGDMFCTAKTRKGLLTEILEELLSAR---KK 671
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A K+LA + + N RQLA+K+ AN YG T A +G++PC +A S GR +
Sbjct: 672 AKKELAVETDPFKKAVLNGRQLAMKVTANSVYGLTGAT-NGKLPCLAIASSTTSFGRQMI 730
Query: 1431 EKAISFVNENEKWK------AKVIYGDTDRYTV 1457
E+A + V A+VIYGDTD V
Sbjct: 731 ERAKAEVEAKYNIANGYSHDAEVIYGDTDSVMV 763
>gi|341875870|gb|EGT31805.1| hypothetical protein CAEBREN_32455 [Caenorhabditis brenneri]
Length = 1017
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 233/527 (44%), Gaps = 90/527 (17%)
Query: 960 LSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSLVGI 1016
LS++++ R + P+ D I +A + E +S+ V +VL C +VG
Sbjct: 286 LSLDIECIGRRGVFPEAIKDPIIQIANLVKIEGESEPFVRNCFVLGTCAP------VVG- 338
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+ C E L + + + DPDI+ G++I L ++ +RA L + ++ + R
Sbjct: 339 --SNIIQCVNEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKVLSLPQVSHLGR 396
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
++G S++ AI + G + + GRI+
Sbjct: 397 Q-------------RDKG-------------SIVRDAAISSKQMGSRVNKSIDIHGRIIF 430
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
+V +++ + KL YT+ +V+ L + + ++ G + R R +Y + A
Sbjct: 431 DVLQVVLRDYKLRSYTLNSVSYQFLSEQKEDVEHNIIPD-LQRGDEQTRRRLAQYCLKDA 489
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRV----------------ESMLL 1240
L L ++++L I E+ARV G+ +L++G Q +V SM+L
Sbjct: 490 YLPLRLLDKLMSIINYIEMARVTGVPMNFLLTKGQQIKVFLNPDFSHHFVFALQILSMML 549
Query: 1241 RLAHTQN-YLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYN 1299
R N +L + N E V++P GFY +P+ LDF SLYPS+MIA+N
Sbjct: 550 RRCKQNNFFLPVIEANS--GDGEGYEG-ATVIDPIRGFYNEPIATLDFASLYPSIMIAHN 606
Query: 1300 LCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLL 1359
LC+ T L K EN ++ + P+G + R+G+LP +L
Sbjct: 607 LCYTTLL-KAPQGIEN------------------EDYIRTPSGQYFATKSKRRGLLPEIL 647
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
E+IL+ R K +K + ++N RQLALK+ AN YG+T A G++PC E++
Sbjct: 648 EDILAARKRAKNDMKN--EKDEFKRMVYNGRQLALKISANSVYGFTGATV-GKLPCLEIS 704
Query: 1420 DSIVQCGRSTLEKAISFVNENEK---------WKAKVIYGDTDRYTV 1457
S+ GR ++ S V K AKVIYGDTD V
Sbjct: 705 QSVTAFGRKMIDMTKSEVERIYKKGALDGKCPADAKVIYGDTDSVMV 751
>gi|451998244|gb|EMD90709.1| hypothetical protein COCHEDRAFT_1179801 [Cochliobolus heterostrophus
C5]
Length = 1115
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 236/513 (46%), Gaps = 70/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L +LS +++ R + P+ D + NVV + +D ++ L +
Sbjct: 309 LRILSFDIECAGRKGVFPEANVDPVIQIANVVT-KYGDDKPFVRNVFCL---------DT 358
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+ I ++ E + + L DPD+++G++ +L +RA HL
Sbjct: 359 VSPIVATQILSFQDEGDMLMKWRDFLDEVDPDVIIGYNTSNFDFPYLLDRAKHL------ 412
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ + P S++ S++ + + G + G
Sbjct: 413 KLQKFPYWSRLKTVQSKVETSNFSSKQM--------------------GSRDTKTTNTNG 452
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ L++ +L++ + +L YT+ +V L+ + + ++T+ F +G +R R Y
Sbjct: 453 RLQLDLLQLVQRDHQLRSYTLNSVCAHFLKEQKEDVHHSMITELF-NGDSNSRRRLAVYC 511
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L ++++L + +E+AR G+ F +LSRG Q R S L R A ++ L I
Sbjct: 512 LKDAYLPQRLLDKLMCLVNYTEMARATGVPFNYILSRGQQVRFISQLFRKA-LEHQLVIP 570
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
+Q + E V+EP+ G+Y +PV LDF SLYPS+M A+NLC+ T L
Sbjct: 571 DLPNQGDNGDQYEG-ATVIEPKRGYYKEPVATLDFASLYPSIMQAHNLCYTTWLD----- 624
Query: 1313 KENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
R + L+ KDE ++ PNG M+ K RKG+L +LEE+LS R K+
Sbjct: 625 ----------RQTVEKLKMKKDEDYIVTPNGDMFCTAKTRKGLLTEILEELLSAR---KK 671
Query: 1372 AIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
A K+LA + + N RQLA+K+ AN YG T A +G++PC +A S GR +
Sbjct: 672 AKKELAVETDPFKKAVLNGRQLAMKVTANSVYGLTGAT-NGKLPCLAIASSTTSFGRQMI 730
Query: 1431 EKAISFVNENEKWK------AKVIYGDTDRYTV 1457
E+A + V A+VIYGDTD V
Sbjct: 731 ERAKAEVEAKYNIANGYSHDAEVIYGDTDSVMV 763
>gi|403333149|gb|EJY65649.1| DNA polymerase [Oxytricha trifallax]
Length = 1272
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 213/464 (45%), Gaps = 89/464 (19%)
Query: 1005 KSESHQRSLVGIPDC------KVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGS 1055
++E R++ + +C KVF SKE +H + F+++L DPDIL G++I
Sbjct: 533 EAEPFIRNVFTLKNCAPIVGTKVFSFSKESDLLHAWREFVRVL---DPDILTGYNIVNFD 589
Query: 1056 LGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAI 1115
L ++ RA L + + P S+I +++ + T L
Sbjct: 590 LPYIIGRAEALKL------ADYPKFSRIKDTFTKVKDSTFTSKTL--------------- 628
Query: 1116 IEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTK 1175
G +++ GRI ++ + + E KL Y++ +V+ L + + ++++
Sbjct: 629 -----GTRETKDINIDGRIQFDMLQYIIREFKLRSYSLNSVSAKFLGEQKEDVQHTIISE 683
Query: 1176 WFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRV 1235
+ R R Y + A L L +M +L+ + +E++R+ YR
Sbjct: 684 -LQNQNEFTRRRLAIYCIKDAYLPLRLMWKLECLFHMTEISRL--------------YRK 728
Query: 1236 ESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMM 1295
L L T I G ++ A +V+EP GFY DPV +LDF SLYPS+M
Sbjct: 729 SQELGYLIPTDKS-NIQDGKYEGA---------VVIEPIRGFYQDPVAILDFASLYPSIM 778
Query: 1296 IAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVL 1355
+A+NLC+ T + P K + VS + PNG +V V+KGVL
Sbjct: 779 MAHNLCYSTL---VPPYKLKDIDVSMYER--------------TPNGDYFVKKSVKKGVL 821
Query: 1356 PRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPC 1415
P +LEE++ R VK +++ +I +I ++RQ ALK AN YG+T A G++PC
Sbjct: 822 PIILEELIQARRRVKSELQRTTDPYEI--KILDSRQNALKTSANSVYGFTGAQV-GQLPC 878
Query: 1416 AELADSIVQCGRSTLEKAISFVNEN------EKWKAKVIYGDTD 1453
++ S+ GR L+ + V E ++ ++VIYGDTD
Sbjct: 879 LPISCSVTAYGRRMLDMTKNLVKEKFSVKEGYQYDSEVIYGDTD 922
>gi|339245491|ref|XP_003378671.1| DNA polymerase delta catalytic subunit [Trichinella spiralis]
gi|316972406|gb|EFV56084.1| DNA polymerase delta catalytic subunit [Trichinella spiralis]
Length = 1069
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 230/514 (44%), Gaps = 94/514 (18%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LSI+++ R + P+ D + +A VL + E R++ +
Sbjct: 313 LRILSIDIECAGRKGVFPEAEKDPVIQIANM------------VLTQGEKEPFVRNVFTL 360
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
C V +E ++ F++ DPDI+ G++IQ L +L +RA L + I R
Sbjct: 361 NSCAPIVGCQE---WASFVR---EVDPDIITGYNIQNFDLPYLIDRAQTLSVKDFAFIGR 414
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
+ K S + R + GR ++ GRI
Sbjct: 415 IK-DQKTVVHSSNVQSR-------------------------QMGRRENKLCNIEGRIQF 448
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +++ + KL YT+ AV+ L+ + + + ++T +G + R R Y + A
Sbjct: 449 DLLQILFRDYKLRSYTLNAVSFHFLQEQKEDVHYSIITD-LQNGNEQTRRRLAVYCLKDA 507
Query: 1197 KLNLEIMNQLDMIN--RTSELARVFGID--FFSVLSRGSQYRVESMLL---RLAHTQNYL 1249
L L ++++L + + A + D +F+ ++GSQ R +++ L R ++Y
Sbjct: 508 YLPLRLLDKLMSSDGCHCEQFAYSWSTDQSYFTTDAQGSQTREQNLFLPAVRSEVGEDYT 567
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
+ V+EP G+Y P+V LDF SLYPS+M+A+NLC+ T + +
Sbjct: 568 GAT-----------------VIEPIKGYYNKPIVTLDFASLYPSIMMAHNLCYTTLIMQ- 609
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
+ R L ++ + P+G +V KG+LP +LE +L+ R V
Sbjct: 610 ----------ETVRSQLS-----PEDYIKTPSGHYFVKKDKCKGLLPEILENLLAARKAV 654
Query: 1370 KQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
KQ +K + ++ + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 655 KQQMK--VETDAFRRQVLDGRQLALKISANSVYGFTGAQV-GKLPCLEISQSVTAFGRMM 711
Query: 1430 LEKA-----ISFVNEN-EKWKAKVIYGDTDRYTV 1457
++K FV N AKVIYGDTD V
Sbjct: 712 IDKTKEEVEKQFVKANGYSADAKVIYGDTDSVMV 745
>gi|255077772|ref|XP_002502470.1| predicted protein [Micromonas sp. RCC299]
gi|226517735|gb|ACO63728.1| predicted protein [Micromonas sp. RCC299]
Length = 1147
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 225/511 (44%), Gaps = 72/511 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFE---NDSDHAVEIYVLLYCKSESHQRSL 1013
+LS++++ R PD +D + +A +D I+ L C +
Sbjct: 347 FRILSVDIECAGRKGHFPDADHDPVIQIATMVTCQGDDRPIIKAIWTLDTCAP------I 400
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
VG V E L + K L S DPD+L+G++I +L RA L +
Sbjct: 401 VG---ADVLSFKDERELLRSWGKFLRSTDPDLLIGYNIVNFDFPYLINRAERLNVEDFAY 457
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
R + SK+ D+ S + +G + + + GR
Sbjct: 458 WGRM-IGSKLRMKDTTFSSKA-------------------------YGTRDSKEITIEGR 491
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++ + ++ + KL+ Y++ AV+ L + + +++ +G R R Y +
Sbjct: 492 VQFDLLQAVQRDHKLSSYSLNAVSAHFLGEQKEDVHHSAISE-LQAGTAETRRRLAVYCL 550
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN----YL 1249
A L ++++L + E+ARV G+ +L+RG +V S +LR A + ++
Sbjct: 551 KDAYLPQRLLDKLMYMYNYIEMARVTGVPLSFLLARGQSIKVLSQILRKAKQRGLLVPHI 610
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
A G Q A E V++ ++G+Y PV LDF SLYPS+M+A+NLC+ T +
Sbjct: 611 AKKGGGEQADGGVAYEG-ATVLDAKAGYYEMPVATLDFASLYPSIMMAHNLCYSTLV--- 666
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
P V +++ P G +V KG+LP +L E+LS R
Sbjct: 667 --------------PRDRVQFMASEDVTRTPCGDTFVKSHKEKGILPEILTELLSARKRA 712
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
K +KK +Q L + + + RQLALK+ AN YG+T A G++PC E++ S GR
Sbjct: 713 KADLKK---AQDPLEKAVLDGRQLALKVSANSVYGFTGATV-GQLPCLEISSSTTAFGRE 768
Query: 1429 TLEKAISFVNEN------EKWKAKVIYGDTD 1453
++ + V + K A VIYGDTD
Sbjct: 769 MIDHTKAMVEKRYTTANGYKANADVIYGDTD 799
>gi|294947427|ref|XP_002785371.1| dna polymerase zeta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239899167|gb|EER17167.1| dna polymerase zeta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 211
Score = 152 bits (385), Expect = 1e-33, Method: Composition-based stats.
Identities = 79/190 (41%), Positives = 119/190 (62%), Gaps = 13/190 (6%)
Query: 1126 SGLHVGGRIVLNVWRLMRGE--VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGR 1183
S LH GRI L++W+ +R E +KL T+ A+ +L +P IP +L +W+
Sbjct: 4 STLH--GRITLDLWQTLRQEDSLKLATTTLHGAAKQLLGLTLPRIPMWLLQEWWTDASC- 60
Query: 1184 ARYRCVE---YVVGRAKLNLEIMNQLDMINRTSELARVFGI-DFFSVLSRGSQYRVESML 1239
C++ Y V L L++++ +++R SE+A V G+ D VL+RGSQYRVE +L
Sbjct: 61 ----CIDAFKYTVRLCTLGLQLLDASALLSRASEMASVLGMPDVEEVLTRGSQYRVECIL 116
Query: 1240 LRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYN 1299
R A + +S QV +QPA+E +P+V+EP SG+Y P ++LDFQSLYPS++IAYN
Sbjct: 117 HRAASRTGFGLVSSSKAQVKAQPALEGVPMVLEPRSGYYRTPTIILDFQSLYPSIIIAYN 176
Query: 1300 LCFCTCLGKI 1309
+CF TCLG++
Sbjct: 177 MCFSTCLGRV 186
>gi|296420586|ref|XP_002839850.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636056|emb|CAZ84041.1| unnamed protein product [Tuber melanosporum]
Length = 1067
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 225/513 (43%), Gaps = 71/513 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVA---LAFENDSDHAVEIYVLLYCKSESHQRSL 1013
L +LS +++ R + P+P D + +A + ++ L C S
Sbjct: 281 LRILSFDIECAGRKGIFPEPHQDPVIQIANMITKYGESKPFIRNVFTLGTCAS------- 333
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
I + +VF + E + + + L DPD+++G++I +L +RA +L
Sbjct: 334 --IVNTQVFSFNNEGKMLISWSQFLHEADPDVIIGYNIANFDFPYLLDRAKYL------K 385
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+ P +++ SE + + + G + GR
Sbjct: 386 LVEFPYWTRLRNVKSEAKDSNFSSKQM--------------------GNRDTKATNTNGR 425
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ L++ +L++ + +L YT+ +V+ L + + ++T+ +G +R R Y +
Sbjct: 426 LQLDLLQLVQRDFQLRSYTLNSVSAHFLGEQKEDVHHSMITE-LQNGTADSRRRLAVYCL 484
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA--I 1251
A L +M++L + +E+ARV G+ F +LSRG Q + S L R A Q + +
Sbjct: 485 KDAYLPQRLMDKLMCLVNYTEMARVTGVPFNYLLSRGQQIKFISQLYRKAKEQKLVVPNL 544
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P + A V+EPE G+Y P+ LDF SLYPS+M A+NLC+ T + K
Sbjct: 545 PPQGGDDQYEGAT-----VIEPERGYYDVPIATLDFASLYPSIMQAHNLCYTTLVKKETC 599
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+ L + +D+ E I PNG +V RKG++P +LE +L K
Sbjct: 600 DR------------LGLQKDIDYE--ITPNGDRFVKAHRRKGMVPLILEALLGA--RKKA 643
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL- 1430
+ + N RQLALK+ AN YG T A G++PC +A S+ GR +
Sbjct: 644 KADLKKATDPFEKAVLNGRQLALKISANSVYGITGATV-GKLPCLPIASSVTGYGRQMIM 702
Query: 1431 ------EKAISFVNENEKWKAKVIYGDTDRYTV 1457
EK + N AKVIYGDTD V
Sbjct: 703 RTKEEVEKRYTIAN-GYTHDAKVIYGDTDSVMV 734
>gi|384248668|gb|EIE22151.1| DNA polymerase delta subunit one [Coccomyxa subellipsoidea C-169]
Length = 1116
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 224/507 (44%), Gaps = 92/507 (18%)
Query: 989 ENDSDHAVEIYVLLYCKSESHQ--RSLVGIPDCKVFVCS------KEIHLFSHFIKILCS 1040
E + D ++I L+ + +S R+++ + C V + KE L + ++
Sbjct: 316 EAEKDPVIQIASLVTEQGQSKPLVRNVMTLDTCAAIVGAEVMSFDKEEDLLKRWRDLVIE 375
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
DPDI++G++I L +L +RA L + R + ++ D++ S +
Sbjct: 376 TDPDIIIGYNICNFDLPYLIKRAETLKVHDFPYWGRN-RKMRLRMRDAQFSSKA------ 428
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+G + + GRI ++ ++ + KL+ Y++ AV+
Sbjct: 429 -------------------YGTREYKEITIDGRIQFDLLVALQRDHKLSSYSLNAVSAYF 469
Query: 1161 LRRKIPSIPFRVLTKWFASGPG----------RARYRCVEYVVGR-----AKLNLEIMNQ 1205
L + + +++ A +ARY C + + A L ++++
Sbjct: 470 LGEQKEDVHHSIISDLQAGNEETRRRLAVYCLKARYHCADMALTHRNMQDAYLPQRLVDK 529
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
L + E+ARV G+ +L+RG +V S +LR A +N L V +QP M+
Sbjct: 530 LMYMYNYIEMARVTGVPMSFLLTRGQSIKVFSQILRKARQKNLL--------VPNQPRMQ 581
Query: 1266 CL---------PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
V++ + GFY PV LDF SLYPS+M+A+NLC+ T +LP
Sbjct: 582 GATGDGVAYEGATVLDAKQGFYKTPVATLDFASLYPSIMMAHNLCYST----LLPPDR-- 635
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
V P +++L P G +V KG+LP +LEE+L R K +K
Sbjct: 636 --VKELSP---------EDVLRCPTGHCFVRAARAKGILPEILEELLGARKRAKADLK-- 682
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
A S + + + RQLALK+ AN YG+T A G+MPC E++ S+ GR+ ++
Sbjct: 683 AASDPFMKAVLDGRQLALKVSANSVYGFTGAVI-GKMPCLEISASVTAFGRNMIDHTKKL 741
Query: 1437 VNENEKWK------AKVIYGDTDRYTV 1457
V E + K VIYGDTD V
Sbjct: 742 VEERYQRKNGYEADCDVIYGDTDSVMV 768
Score = 44.3 bits (103), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 36/166 (21%)
Query: 16 VSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVP-- 73
+ +D+++ PP L ++EVP++R+YG T G C ++H PY Y+
Sbjct: 90 LDVDYFIGPP-------NQQLYRTDLSEVPILRMYGVTEHGNSVCTYVHGFEPYFYIEAP 142
Query: 74 -----------CADIPVQLRQEDDGYMHAISLALEKALKV-----KGSAGSKRQHVHECS 117
CA + V+ + + +A+ + + + S R V +
Sbjct: 143 RSFGPDDCDSLCAQLNVRFHRICAIPKFCLGVAMVQKQTIMHYQPQKSRTFLRITVATPN 202
Query: 118 LVRAKKG----GAVFDKSLQPH------ESHIPFLLQFLVDYNLYG 153
LV +G G D SLQ H ESH+ F L+F++D ++ G
Sbjct: 203 LVTQARGMLEHGINVD-SLQRHMAFMTYESHVLFALRFMIDCDIVG 247
>gi|388580039|gb|EIM20357.1| putative delta DNA polymerase [Wallemia sebi CBS 633.66]
Length = 1060
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 224/507 (44%), Gaps = 67/507 (13%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGI 1016
L +LS +++ R + P+ + D + +A + I + KS +H I
Sbjct: 267 LRILSFDIECAGRQGIFPEAQIDPVIQIANMVTRQGESKPFIRNVFTLKSCAH------I 320
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+V E + + + + DPD+++G++ + +L +RA L + R
Sbjct: 321 AGSQVLSFEDESKMLNAWRDFVEEADPDVVIGYNTSNFDIPYLMDRAKALKATKFCYLGR 380
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
K G S S + +G + ++ GR+ L
Sbjct: 381 MK-NVKSEVGTSHFSSKA-------------------------YGTRDSKTTNMEGRLQL 414
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ +L++ E KL Y++ +V L + + ++T+ +G +R R Y + A
Sbjct: 415 DLLQLIQREHKLRSYSLNSVCAEFLGEQKEDVHHSIITE-LQNGTPESRRRLAVYCLKDA 473
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L ++++L + +E+ARV G+ F +L++G +V S + R A YL P
Sbjct: 474 YLPQRLLDRLMSLVNQTEMARVTGVPFNYLLAKGQSIKVMSQICRQAQVHGYLV--PALR 531
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENT 1316
S E V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 532 VEGSDEQYEG-ATVIEPRRGYYDVPITTLDFSSLYPSIMMAHNLCYTTLL---------- 580
Query: 1317 LGVSSFRPDLHVLRDLK----DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
D + LK ++ + PN M+V P RKG+LP +L++++S R +
Sbjct: 581 --------DPQTVERLKLKEGEDYIKTPNNDMFVTPVKRKGLLPVVLQDLISARKRARAD 632
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
IK + + + RQLALK+ AN YG+T A G++PC ++ S GR +E+
Sbjct: 633 IK--SEKDPFRRAVLDGRQLALKVSANSVYGFTGATI-GKLPCLPISSSTTAYGRRMIER 689
Query: 1433 AIS------FVNENEKWKAKVIYGDTD 1453
V+ N A+V+YGDTD
Sbjct: 690 TKEEVESHYKVSNNYSHDAEVVYGDTD 716
>gi|237831459|ref|XP_002365027.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|211962691|gb|EEA97886.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|221506807|gb|EEE32424.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
VEG]
Length = 1268
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 225/484 (46%), Gaps = 80/484 (16%)
Query: 1004 CKSESHQRSLVG---IPDCKVFVCSKEI---------------HLFSHFIKILCSFDPDI 1045
C +++ ++ L G P C+V KE + + + + + DPD
Sbjct: 499 CVAKARKKRLSGGLERPLCRVLFALKECASIAGSVVLWFDDEKEMLAKWAEFVRQVDPDF 558
Query: 1046 LMGWDIQGGSLGFLAERAAHLGIGLLNDISR-TPLESKIAAGDSEISERGITDNMLAEPV 1104
L G++ L +L RAA L + N +S+ LESKI DS S R +
Sbjct: 559 LSGYNCVNFDLNYLITRAATLKVVGFNRLSKLKSLESKIR--DSSFSSRAL--------- 607
Query: 1105 VAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRK 1164
G + GRI ++ L+R + KL Y++ V+ L+ +
Sbjct: 608 ----------------GTHEGKDIATEGRIQFDLLELVRRDYKLKSYSLNFVSFEFLKEQ 651
Query: 1165 IPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFF 1224
+ + ++ F P +R R Y + A L L ++ +L + E++RV G
Sbjct: 652 KEDVHYNMIGDLFRGCPS-SRRRIGVYCLKDAYLPLRLLKELLFLYNYVEMSRVTGTPLN 710
Query: 1225 SVLSRGSQYRVESMLLRLAHTQNYLA----ISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
+L+RG Q +V + LLR NY+ + G++ V + A V+EP GFY
Sbjct: 711 FLLTRGQQIKVTAQLLRKCKELNYVVPVVKRTGGDNSVQYEGAT-----VLEPRKGFYDK 765
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
P+ LDF SLYPS+MIA+N+C+ T + S +T+ PD D+ PP
Sbjct: 766 PIATLDFASLYPSIMIAHNICYSTLVAS---SAAHTMN----NPD-----DVTVTTTSPP 813
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ-QILHRIFNARQLALKLIAN 1399
+ +V +R+GVLP ++EE+++ R K A K++A ++ ++ ++ N RQLALK+ AN
Sbjct: 814 H--KFVKKHIRRGVLPMIVEELIAAR---KAARKEMAAAKDEMTRQVLNGRQLALKISAN 868
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTL-----EKAISFVNENE-KWKAKVIYGDTD 1453
YGYT G++PC E+A +I GR + E F +N+ A VIYGDTD
Sbjct: 869 SVYGYTGTTTGGQLPCLEVATTITCFGRDMIDFTRREVEKMFCRDNQHACNATVIYGDTD 928
Query: 1454 RYTV 1457
V
Sbjct: 929 SVMV 932
>gi|47211849|emb|CAF94397.1| unnamed protein product [Tetraodon nigroviridis]
Length = 267
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 108/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+F+VR+V+ D+Y+A P+ D+CYS + V VPV+R++G+TPAGQKTCLH+H PY
Sbjct: 1 MFAVRVVTADYYLASPVKDLDVCYSEFRESNVKTVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
+YVP Q+ + YM ++ ++++AL V G+ S QH+ + +LV K
Sbjct: 61 IYVPYDG----YTQQPERYMRLVAFSIDRALNVTMGNPASSAQHIFKVALVSGKPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GAV +KS QP+E HIPFLLQ +DYNLYGM L+
Sbjct: 117 AKEKLFMKIYLYNPQMVKRVCDLLQSGAVMNKSYQPYEGHIPFLLQLFIDYNLYGMNLLN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|221487122|gb|EEE25368.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
GT1]
Length = 1268
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 218/465 (46%), Gaps = 68/465 (14%)
Query: 1011 RSLVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
R L + +C V E + + + + + DPD L G++ L +L RAA
Sbjct: 518 RVLFALKECASIAGSVVLWFDDEKEMLAKWAEFVRQVDPDFLSGYNCVNFDLNYLITRAA 577
Query: 1065 HLGIGLLNDISR-TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRT 1123
L + N +S+ LESKI DS S R + G
Sbjct: 578 TLKVVGFNRLSKLKSLESKIR--DSSFSSRAL-------------------------GTH 610
Query: 1124 HASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGR 1183
+ GRI ++ L+R + KL Y++ V+ L+ + + + ++ F P
Sbjct: 611 EGKDIATEGRIQFDLLELVRRDYKLKSYSLNFVSFEFLKEQKEDVHYNMIGDLFRGCPS- 669
Query: 1184 ARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLA 1243
+R R Y + A L L ++ +L + E++RV G +L+RG Q +V + LLR
Sbjct: 670 SRRRIGVYCLKDAYLPLRLLKELLFLYNYVEMSRVTGTPLNFLLTRGQQIKVTAQLLRKC 729
Query: 1244 HTQNYLA----ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYN 1299
NY+ + G++ V + A V+EP GFY P+ LDF SLYPS+MIA+N
Sbjct: 730 KELNYVVPVVKRTGGDNSVQYEGAT-----VLEPRKGFYDKPIATLDFASLYPSIMIAHN 784
Query: 1300 LCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLL 1359
+C+ T + S +T+ PD D+ PP+ +V +R+GVLP ++
Sbjct: 785 ICYSTLVAS---SAAHTMN----NPD-----DVTVTTTSPPH--KFVKKHIRRGVLPMIV 830
Query: 1360 EEILSTRIMVKQAIKKLAPSQ-QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAEL 1418
EE+++ R K A K++A ++ ++ ++ N RQLALK+ AN YGYT G++PC E+
Sbjct: 831 EELIAAR---KAARKEMAAAKDEMTRQVLNGRQLALKISANSVYGYTGTTTGGQLPCLEV 887
Query: 1419 ADSIVQCGRSTL-----EKAISFVNENE-KWKAKVIYGDTDRYTV 1457
A +I GR + E F +N+ A VIYGDTD V
Sbjct: 888 ATTITCFGRDMIDFTRREVEKMFCRDNQHACNATVIYGDTDSVMV 932
>gi|345319504|ref|XP_001521151.2| PREDICTED: DNA polymerase delta catalytic subunit, partial
[Ornithorhynchus anatinus]
Length = 340
Score = 150 bits (378), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 166/324 (51%), Gaps = 32/324 (9%)
Query: 1141 LMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNL 1200
L+R E KL YT+ AV+ L + + ++T +G ++R R Y + A L L
Sbjct: 7 LLR-EHKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGTDQSRRRLAVYCLKDALLPL 64
Query: 1201 EIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVAS 1260
++ +L ++ E+ARV G+ +LSRG Q +V S LLR A Q + P A
Sbjct: 65 RLLERLMVLVNAVEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMHQGL--VMPVVKTEAG 122
Query: 1261 QPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVS 1320
+ V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P LG++
Sbjct: 123 EDYTGAT--VIEPHKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RPGARERLGLT 177
Query: 1321 SFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ 1380
D+ + P G +V VRKG+LP++LE +LS R K+A +LA
Sbjct: 178 G------------DQFIRTPTGDEFVKSSVRKGLLPQILENLLSAR---KRAKAELARET 222
Query: 1381 QILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE 1439
L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +EK V
Sbjct: 223 DPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIEKTKQLVES 281
Query: 1440 NEKWK------AKVIYGDTDRYTV 1457
+ AKV+YGDTD V
Sbjct: 282 KYTLENGYGANAKVVYGDTDSVMV 305
>gi|401407254|ref|XP_003883076.1| DNA polymerase, related [Neospora caninum Liverpool]
gi|325117492|emb|CBZ53044.1| DNA polymerase, related [Neospora caninum Liverpool]
Length = 1219
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 209/443 (47%), Gaps = 62/443 (13%)
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR-TPLESKIAA 1085
E + + + + + DPD L G++ L +L RA L + N +S+ LESKI
Sbjct: 491 EKEMLAKWAEFVRQVDPDFLSGYNCVNFDLNYLITRATTLKVDGFNRLSKLKSLESKIR- 549
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
DS S R + G + GRI ++ L+R +
Sbjct: 550 -DSSFSSRAL-------------------------GTHEGKEIPTEGRIQFDILELVRRD 583
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
KL Y++ V+ L+ + + + ++ F P +R R Y + A L L ++ +
Sbjct: 584 YKLKSYSLNFVSFEFLKEQKEDVHYSMIGDLFRGCPS-SRRRIGVYCLKDAYLPLRLLKE 642
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA----ISPGNHQVASQ 1261
L + E++RV G +L+RG Q +V + LLR NYL + G++ V +
Sbjct: 643 LLFLYNYVEMSRVTGTPLNFLLTRGQQIKVTAQLLRKCKELNYLVPVVKRTGGDNSVQYE 702
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSS 1321
A V+EP+ GFY P+ LDF SLYPS+MIA+N+C+ T + K
Sbjct: 703 GAT-----VLEPKKGFYDKPIATLDFASLYPSIMIAHNICYSTLVAASEAHKMTN----- 752
Query: 1322 FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQ- 1380
PD D+ +PP+ +V VR+GVLP ++EE+++ R K A K++A ++
Sbjct: 753 --PD-----DVTVTTTLPPH--KFVKAHVRRGVLPMIVEELIAAR---KAARKEMAAAKD 800
Query: 1381 QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV--- 1437
++ ++ N RQLALK+ AN YGYT G++PC E+A +I GR ++ V
Sbjct: 801 EMTKQVLNGRQLALKISANSVYGYTGTTTGGQLPCLEVATTITCFGRDMIDFTRREVEKM 860
Query: 1438 ---NENEKWKAKVIYGDTDRYTV 1457
++ A VIYGDTD V
Sbjct: 861 FCKDKTRACNATVIYGDTDSVMV 883
>gi|440493562|gb|ELQ76017.1| DNA polymerase delta, catalytic subunit [Trachipleistophora hominis]
Length = 1386
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 165/334 (49%), Gaps = 32/334 (9%)
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
GRIV+++ +++ E KL YT+ V+ L + +P+ ++ F +G + R R Y
Sbjct: 599 GRIVVDMLTVIKKEHKLRSYTLNNVSVHFLGMQKEDLPYYLIRGLF-NGDDKTRRRIAVY 657
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ L L I +L + E+ RV G+ +RG ++ ++LR A NY+
Sbjct: 658 CLKDTLLPLLIYEKLLIFITGVEMVRVLGVPINWHFNRGISVKIFGLILREARKNNYVVP 717
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
S VA + V+EPE G+Y +P+ VLDF SLYPS++IA+NLC+ T L
Sbjct: 718 S-----VAVKDEGYMGAFVIEPERGYYDEPIAVLDFASLYPSIIIAHNLCYSTML----- 767
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
LG H + KD P G +V VR G+LP +LE++L R VK+
Sbjct: 768 -----LGTR------HGIDKNKDAER-SPTGSYFVKRDVRVGILPVILEKMLKKRKEVKE 815
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+K + + NARQ A K+ AN YG+T + GR+PC +++ S+ GR +
Sbjct: 816 KMKN--EKNPFMKTLLNARQNAFKVSANSVYGFTGSAI-GRLPCIDISQSVTGYGREMII 872
Query: 1432 KAISFV------NENEKWKAKVIYGDTDRYTVCI 1459
K + V + + + VIYGDTD V I
Sbjct: 873 KTKNVVESVFCRSNGYDFDSHVIYGDTDSVMVRI 906
>gi|294890731|ref|XP_002773286.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878338|gb|EER05102.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 664
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 185/392 (47%), Gaps = 56/392 (14%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I D V E L S F + + DPD++ G++I +L +R+AHL +
Sbjct: 306 IADATVVSFQSEKDLLSSFQQYMVLVDPDVVTGYNIINFDFPYLLDRSAHLKV------- 358
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDE-WGRTHASGLHVGGRI 1134
P E RG+ + KD++ E GR +++ GR+
Sbjct: 359 HPPFEYLGRL-------RGVASKV------------KDSVFESRALGRRENKDINIEGRV 399
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
++ +M+ E KL Y++ AV+ L + + + ++ G R R Y +
Sbjct: 400 QFDMLIVMQREHKLRSYSLNAVSAEFLGEQKEDVHYSIIGD-LQKGTPETRKRLAVYCLK 458
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL----A 1250
A L L +MN+L + +E+ARV G+ +L+RG +V S L R A + Y+
Sbjct: 459 DALLPLRLMNKLVCMYNYTEMARVTGVPINYLLTRGQMIKVASQLFRKARSHGYVIPAQK 518
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
SPG + V++P +GFY +P+ LDF SLYPS+M A+NLC+ T + +
Sbjct: 519 SSPGGEYEGAT--------VLDPSTGFYQNPIATLDFASLYPSIMQAHNLCYSTLVQPSV 570
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
+EN + + ++ P G ++V VRKG+LP +LEE+L R K
Sbjct: 571 AQREN------------LTEGDEGDVTRTPCGHLFVKQSVRKGLLPMVLEELLQAR---K 615
Query: 1371 QAIKKLAPSQQILHR-IFNARQLALKLIANVT 1401
+A K++A + L + + N RQLALK+ AN++
Sbjct: 616 RAKKEMAQATDPLKKMVLNGRQLALKVSANLS 647
Score = 44.3 bits (103), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 41/95 (43%), Gaps = 16/95 (16%)
Query: 16 VSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYLYVPCA 75
V +D+Y A P C +Q G EVPVIR++G T G HIH LPY Y P
Sbjct: 44 VDVDNYSAAP----RAC-DPIQNG---EVPVIRMFGVTATGNSLMCHIHGFLPYFYCPRP 95
Query: 76 DIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKR 110
D V + LE AL+ +A R
Sbjct: 96 DQTVDCER--------FQTRLESALRGSQTASGSR 122
>gi|340343168|emb|CCA95021.1| DNA polymerase delta, partial [Dipylidium caninum]
Length = 350
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 148/281 (52%), Gaps = 18/281 (6%)
Query: 1179 SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
+G + R R Y + A L L ++++L + E+ARV G+ +L+RG Q +V S
Sbjct: 17 NGNDQTRRRLAVYCLKDAYLPLRLLDKLMSVVNNVEMARVTGVPITYLLTRGQQVKVLSQ 76
Query: 1239 LLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAY 1298
LLR A N+L + Q Q V+EP GFY +P+ LDF SLYPS+M+A+
Sbjct: 77 LLRKAKENNFLLPT----QKPGQSEEYVGATVIEPRRGFYNEPITTLDFSSLYPSIMMAH 132
Query: 1299 NLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRL 1358
NLC+ T L N+ G+++ ++ D+ + P+G +V +RKG+LP +
Sbjct: 133 NLCYTTLLRP--EDISNSGGINNLLAKYNL---GPDDYIRTPSGSYFVKKHIRKGLLPMI 187
Query: 1359 LEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAEL 1418
E++L+ R K + + + ++ + RQLALK+ AN YG+T A G++PC E+
Sbjct: 188 FEKLLAARKKAKSEL--IMETDPFKRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEI 244
Query: 1419 ADSIVQCGRSTLEKAISFVNEN------EKWKAKVIYGDTD 1453
+ S+ GR +E+ V E K A VIYGDTD
Sbjct: 245 SGSVTGFGREMIEETKRLVEEKFTVANGYKNNAMVIYGDTD 285
>gi|347826748|emb|CCD42445.1| similar to Similar to dna polymerase delta catalytic subunit (ec
2.7.7.7) [Botryotinia fuckeliana]
Length = 616
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 153/294 (52%), Gaps = 31/294 (10%)
Query: 1172 VLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGS 1231
++T+ F P +R R Y + A L +M++L + +E+ARV G+ F +LSRG
Sbjct: 1 MITELFNGTP-ESRRRLAVYCLKDAFLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQ 59
Query: 1232 QYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLY 1291
Q + S L R A Q + P +S+ E V+EP G+Y+ P+ LDF SLY
Sbjct: 60 QVKFISQLFRKALEQKL--VIPNLSSNSSEEQYEG-ATVIEPTRGYYSVPIATLDFASLY 116
Query: 1292 PSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDE-LLIPPNGVMYVPPKV 1350
PS++ A+NLC+ T L K + + L+ KDE ++ PNG M+V K
Sbjct: 117 PSIIQAHNLCYTTLLKKDV---------------VEALKLEKDEDYIVTPNGDMFVTTKQ 161
Query: 1351 RKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGF 1409
RKG+L ++LEE+L+ R KQA ++LA + + N RQLALK+ AN YG T A
Sbjct: 162 RKGLLTQILEELLTAR---KQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV 218
Query: 1410 SGRMPCAELADSIVQCGRSTLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
G++PC +A S GR +EK A + A+VIYGDTD V
Sbjct: 219 -GKVPCLPIASSTTSYGRQMIEKTKAEVEAKYTIANGYSHDAQVIYGDTDSVMV 271
>gi|308504541|ref|XP_003114454.1| hypothetical protein CRE_27041 [Caenorhabditis remanei]
gi|308261839|gb|EFP05792.1| hypothetical protein CRE_27041 [Caenorhabditis remanei]
Length = 1080
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 231/514 (44%), Gaps = 81/514 (15%)
Query: 960 LSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLLYCKSESHQRSLVGI 1016
LS++++ R + P+ D I +A + E +++ V +VL C +VG
Sbjct: 283 LSLDIECIGRRGVFPEAIKDPIIQIANLVKIEGETEPFVRNCFVLGTCAP------VVG- 335
Query: 1017 PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISR 1076
+ C E L + + + DPDI+ G++I L ++ +RA L + ++ + R
Sbjct: 336 --SNIIQCVNEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKVLSLPQVSHLGR 393
Query: 1077 TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVL 1136
++G S++ AI + G + + GRI+
Sbjct: 394 Q-------------KDKG-------------SVVRDAAISSKQMGSRVNKSIDIHGRIIF 427
Query: 1137 NVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
+V +++ + KL YT+ +V+ L + + ++ G + R R +Y + A
Sbjct: 428 DVLQVVLRDYKLRSYTLNSVSYQFLSEQKEDVEHNIIPD-LQRGDEQTRRRLAQYCLKDA 486
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY----LAIS 1252
L L ++++L I E+ARV G L + S ++ SM+LR N+ + ++
Sbjct: 487 YLPLRLLDKLMSIINYIEMARVTGFIMPMNLYK-SWLQILSMMLRRCKQNNFFLPVIEVN 545
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
G+ + V++P GFY +P+ LDF SLYPS+MIA+NLC+ T L
Sbjct: 546 SGDGEGYEGAT------VIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLL------ 593
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
++ GV + ++ + P+G + R G+LP +LE++L R K
Sbjct: 594 -KSPQGVEN------------EDYIRTPSGQYFATKSKRHGLLPEILEDLLVARKRAKNF 640
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K + ++N RQLALK+ AN YG+T A G++PC E++ S+ GR ++
Sbjct: 641 MKN--EKDEFKRMVYNGRQLALKISANSVYGFTGA-VVGKLPCLEISQSVTAFGRKMIDM 697
Query: 1433 AISFVNENEK---------WKAKVIYGDTDRYTV 1457
S V K AKVIYGDTD V
Sbjct: 698 TKSEVERIYKKGALEGKCPADAKVIYGDTDSVMV 731
>gi|156386842|ref|XP_001634120.1| predicted protein [Nematostella vectensis]
gi|156221199|gb|EDO42057.1| predicted protein [Nematostella vectensis]
Length = 265
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 109/190 (57%), Gaps = 36/190 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D Y A PIPG D+ YSS + K+ +VP++R++G+T GQKTC H+H A PY
Sbjct: 1 MFSVRIVNADFYTAAPIPGLDLTYSSFRESKIQKVPLVRIFGATKQGQKTCAHVHGAFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
+YVP + D Y+ + +++ A+ V G A S HV++ S+++ +
Sbjct: 61 IYVPYDGT-----EPRDKYLRQFATSVDFAVHVSLGRASSSTHHVYDISIIKGRPFYGYH 115
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K+ QPHE+HIP+LLQF +DYNLYGM L+
Sbjct: 116 EEETEFIKISFYNPFLVNRVVELLQSGAIMNKTFQPHEAHIPYLLQFFMDYNLYGMNFLN 175
Query: 159 LSKLKFRHPV 168
S +KFR PV
Sbjct: 176 ASSVKFRFPV 185
>gi|344257341|gb|EGW13445.1| DNA polymerase delta catalytic subunit [Cricetulus griseus]
Length = 1056
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 1183 RARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRL 1242
+ R R Y + A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR
Sbjct: 452 QTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLSRGQQVKVVSQLLRQ 511
Query: 1243 AHTQNYL---AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYN 1299
A Q L + G V+EP G+Y P+ LDF SLYPS+M+A+N
Sbjct: 512 AMRQGLLMPVVKTEGGEDYTGA-------TVIEPLKGYYDVPIATLDFSSLYPSIMMAHN 564
Query: 1300 LCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLL 1359
LC+ T L P LG+ DE + P G +V VRKG+LP++L
Sbjct: 565 LCYTTLL---RPGAAQKLGLKP------------DEFIKTPTGDEFVKSSVRKGLLPQIL 609
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAEL 1418
E +LS R K+A +LA L R + + RQLALK+ AN YG+T A G++PC E+
Sbjct: 610 ENLLSAR---KRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEI 665
Query: 1419 ADSIVQCGRSTLEKAISFVNENEKWK------AKVIYGDTD 1453
+ S+ GR +EK V + AKV+YGDTD
Sbjct: 666 SQSVTGFGRQMIEKTKQLVESKYTLENGYNANAKVVYGDTD 706
Score = 47.4 bits (111), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 75/198 (37%), Gaps = 52/198 (26%)
Query: 6 PDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGG---KVNEVPVIRVYGSTPAGQKTCLH 62
P++ + + IDHY+ +P L GG N VP++R +G T G C H
Sbjct: 85 PNTEPLIFQQLEIDHYVGSAVP--------LPGGPPTSCNSVPILRAFGVTDEGFSVCCH 136
Query: 63 IHRALPYLYVPC---------------------------------ADIPVQL--RQEDDG 87
IH PY Y P A + ++L R+ G
Sbjct: 137 IHGFAPYFYTPAPPGFGAEHLSDLQRELSTAISRDQRGGKELSGPAVLAIELCSRESMFG 196
Query: 88 YM-HAISLALEKALKVKGSAGSKRQHVHECSLVRAKKGGAVFDKSLQPHESHIPFLLQFL 146
Y H S L L + R+ + + +R G S P+E+++ F ++F+
Sbjct: 197 YHGHGPSPFLRITLALPRLVAPARRLLEQG--IRVPGLGT---PSFAPYEANVDFEIRFM 251
Query: 147 VDYNLYGMGHLHLSKLKF 164
VD ++ G L L K+
Sbjct: 252 VDADIVGCNWLELPAGKY 269
>gi|399219112|emb|CCF75999.1| unnamed protein product [Babesia microti strain RI]
Length = 977
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 203/444 (45%), Gaps = 64/444 (14%)
Query: 1021 VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTP-L 1079
+F E + + + + DPD++ G++I + +L ERA L + + R +
Sbjct: 247 IFSFVNETDMLLAWSQFFRAVDPDLITGYNIVNFDIPYLIERAMSLNLDEFCYLGRIKNI 306
Query: 1080 ESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVW 1139
+ + +G + G+ +N KD IE GRI+ +V
Sbjct: 307 PTTVKSGVKSNRQLGLYEN-------------KDINIE--------------GRIIFDVH 339
Query: 1140 RLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLN 1199
L+R E L Y++ V+ L+ + + ++ K G R R Y + + L
Sbjct: 340 DLIRREYSLKSYSLNYVSFEFLKELKDDVHYSIM-KSLHYGTNEERRRLANYCLKDSLLP 398
Query: 1200 LEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--AISPGNHQ 1257
L+++++L ++ E+ARV G +++RG Q +V +LR N + I +
Sbjct: 399 LKLIDKLLLLINYVEMARVTGTPIKFLITRGQQIKVTMQILRQCKVMNLVMPCIKSNGQE 458
Query: 1258 VASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTL 1317
+ AM VMEP G++ P+ VLD+QSLYPS+MIA+N+C+ T +
Sbjct: 459 ANYEGAM-----VMEPIKGYHKVPIAVLDYQSLYPSLMIAHNICYSTLIRS--------- 504
Query: 1318 GVSSFRPDLHVLRDLKDELLIPPN-GVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
DLH D KD +P N G+ ++ P + KG+LP +++ +L+ R K +K
Sbjct: 505 ------EDLHKY-DEKDFTRVPDNEGICFIKPHI-KGLLPIVVDNLLTARAKAKHEMKMC 556
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS-------T 1429
+ N RQ ALK+ AN YGYT A G +P +LA +I GR T
Sbjct: 557 --EDPFTKNVLNGRQYALKITANSVYGYTGASSGGWLPSVQLATAITSFGRQLIGKTAMT 614
Query: 1430 LEKAISFVNENEKWKAKVIYGDTD 1453
+E+ + N AKV+YGDTD
Sbjct: 615 IERMYTVAN-GYSADAKVVYGDTD 637
>gi|156086780|ref|XP_001610797.1| DNA polymerase delta subunit [Babesia bovis T2Bo]
gi|154798050|gb|EDO07229.1| DNA polymerase delta subunit [Babesia bovis]
Length = 1065
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 206/442 (46%), Gaps = 55/442 (12%)
Query: 1021 VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLE 1080
V + E L + + + DPD L G++I + +L RA L L + ++ P
Sbjct: 330 VLSFANEAALLMAWKQFFIAVDPDFLTGYNIINFDIPYLINRANALK---LPEFTQLP-- 384
Query: 1081 SKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWR 1140
+I S + + ++N + G +++ GRI+ +V+
Sbjct: 385 -RITRSKSSVRDIISSNNTM--------------------GTFENKEINIEGRILFDVYD 423
Query: 1141 LMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNL 1200
L+R + KL YT+ V+ L+++ + ++K G R R Y + + L L
Sbjct: 424 LVRRDHKLKSYTLNYVSFEFLKQQKEDVHHSTMSK-LQLGSAADRRRIASYCLKDSVLPL 482
Query: 1201 EIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVA- 1259
++++L ++ E+ARV ++SRG Q RV + R Y S Q A
Sbjct: 483 LLIDKLLLLFNYVEMARVTSTPIKMLISRGQQIRVTMQIYRQCKLMGYAVPSVNAAQRAA 542
Query: 1260 -SQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLG 1318
S+ + E V+EP+ G++ + + VLDFQSLYPS+MIA+NLC+ T + SK
Sbjct: 543 NSEASYEG-ATVLEPKKGYHRNAIAVLDFQSLYPSIMIAHNLCYSTLVPPADASKYPA-- 599
Query: 1319 VSSFRPDLHVLRDLKDELLIPPN-GVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA 1377
+D +P + G+ ++ VRKG+LP ++E ++ R K+ +K
Sbjct: 600 --------------EDLTTVPGHPGLYFIKAHVRKGMLPLIVERLIEARKKAKEEMK--V 643
Query: 1378 PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR----STLEKA 1433
+ +L + + RQLALK+ N YGYT A SG +PC E+A +I GR T EK
Sbjct: 644 CTDPMLRSVLDGRQLALKITTNSVYGYTGASTSGFLPCVEVATAITSFGRYMIVDTKEKI 703
Query: 1434 ISFVNENEKW--KAKVIYGDTD 1453
S + + A V+YGDTD
Sbjct: 704 ESHFTKANGYDTDASVVYGDTD 725
>gi|340343154|emb|CCA95014.1| DNA polymerase delta, partial [Taenia mustelae]
Length = 307
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 131/246 (53%), Gaps = 18/246 (7%)
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E+ARV G+ +L RG Q +V S LLR A L + Q Q V+EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVVSQLLRKAKEHGLLLPT----QRPGQGDEYVGGTVIEP 64
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK 1333
+ GFY +P+ LDF SLYPS+M+A+NLC+ T L S +G S + +L
Sbjct: 65 QRGFYNEPITTLDFSSLYPSLMVAHNLCYTTLLKPEDISASGGIGSLSAKYNLG-----P 119
Query: 1334 DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLA 1393
D+ + P G +V +RKG+LP +LE++L R+ K+ + + Q R+ + RQLA
Sbjct: 120 DDYIRTPTGAYFVKKHIRKGLLPSVLEQLLEARMKAKREMA--TETDQFKRRVLDGRQLA 177
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE------NEKWKAKV 1447
LK+ AN YG+T A G++PC E++ S+ GR +E A + E K AKV
Sbjct: 178 LKVSANSVYGFTGAQV-GKLPCLEISSSVSGFGREMIETAKRLLEEKFTIGNGYKSDAKV 236
Query: 1448 IYGDTD 1453
IYGDTD
Sbjct: 237 IYGDTD 242
>gi|261853478|gb|ACY00400.1| ORF9 [Human herpesvirus 8]
gi|407355750|gb|AFU08340.1| ORF9 [Human herpesvirus 8]
Length = 1012
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 230/496 (46%), Gaps = 73/496 (14%)
Query: 990 NDSDHAVEIYVLLYC--KSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSF 1041
D D ++I +L+ + + R L+G+ C +VF E + + F+ +L +
Sbjct: 310 QDEDMIIQISCVLHTVGNDKPYTRMLLGLGTCDPLPGVEVFEFPSEYDMLAAFLSMLRDY 369
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDS-EISE-RGITDNM 1099
+ + + G++I L ++ RA + L D + KI G E+ + RG +D
Sbjct: 370 NVEFITGYNIANFDLPYIIARATQVYDFKLQDFT------KIKTGSVFEVHQPRGGSDG- 422
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
+ R+ S + + G + ++++++ R ++ L+ Y ++ VA+
Sbjct: 423 ------------------GNFMRSQ-SKVKISGIVPIDMYQVCREKLSLSDYKLDTVAKQ 463
Query: 1160 VLRRKIPSIPFRVLTKWFASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARV 1218
L R+ I ++ + F SGP GRA+ Y V + L ++++ + SE+A++
Sbjct: 464 CLGRQKDDISYKDIPPLFKSGPDGRAKVG--NYCVIDSVLVMDLLLRFQTHVEISEIAKL 521
Query: 1219 FGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFY 1278
I VL+ G Q RV S LL A T+ Y+ P V+ V+ P GFY
Sbjct: 522 AKIPTRRVLTDGQQIRVFSCLLEAAATEGYILPVPKGDAVSGYQGAT----VISPSPGFY 577
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLI 1338
DPV+V+DF SLYPS++ A+NLC+ T ++P S H+ D + ++
Sbjct: 578 DDPVLVVDFASLYPSIIQAHNLCYST----LIPG-------DSLHLHPHLSPDDYETFVL 626
Query: 1339 PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIA 1398
V +V R+ +L +LL L+ R +++ + + L I + +QLA+K+
Sbjct: 627 SGGPVHFVKKHKRESLLAKLLTVWLAKRKEIRKTLASC--TDPALKTILDKQQLAIKVTC 684
Query: 1399 NVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF----------------VNENEK 1442
N YG+T SG +PC +A+++ GR LE++ +F V+ +
Sbjct: 685 NAVYGFTGVA-SGILPCLNIAETVTLQGRKMLERSQAFVEAISPERLAGLLRRPVDVSPD 743
Query: 1443 WKAKVIYGDTDRYTVC 1458
+ KVIYGDTD +C
Sbjct: 744 ARFKVIYGDTDSLFIC 759
>gi|1718257|gb|AAC57086.1| ORF 9 [Human herpesvirus 8 type M]
gi|8714519|gb|AAC57974.2| DNA polymerase [Human herpesvirus 8]
Length = 1012
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 230/496 (46%), Gaps = 73/496 (14%)
Query: 990 NDSDHAVEIYVLLYC--KSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSF 1041
D D ++I +L+ + + R L+G+ C +VF E + + F+ +L +
Sbjct: 310 QDEDMIIQISCVLHTVGNDKPYTRMLLGLGTCDPLPGVEVFEFPSEYDMLAAFLSMLRDY 369
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDS-EISE-RGITDNM 1099
+ + + G++I L ++ RA + L D + KI G E+ + RG +D
Sbjct: 370 NVEFITGYNIANFDLPYIIARATQVYDFKLQDFT------KIKTGSVFEVHQPRGGSDG- 422
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
+ R+ S + + G + ++++++ R ++ L+ Y ++ VA+
Sbjct: 423 ------------------GNFMRSQ-SKVKISGIVPIDMYQVCREKLSLSDYKLDTVAKQ 463
Query: 1160 VLRRKIPSIPFRVLTKWFASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARV 1218
L R+ I ++ + F SGP GRA+ Y V + L ++++ + SE+A++
Sbjct: 464 CLGRQKDDISYKDIPPLFKSGPDGRAKVG--NYCVIDSVLVMDLLLRFQTHVEISEIAKL 521
Query: 1219 FGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFY 1278
I VL+ G Q RV S LL A T+ Y+ P V+ V+ P GFY
Sbjct: 522 AKIPTRRVLTDGQQIRVFSCLLEAAATEGYILPVPKGDAVSGYQGAT----VISPSPGFY 577
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLI 1338
DPV+V+DF SLYPS++ A+NLC+ T ++P S H+ D + ++
Sbjct: 578 DDPVLVVDFASLYPSIIQAHNLCYST----LIPG-------DSLHLHPHLSPDDYETFVL 626
Query: 1339 PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIA 1398
V +V R+ +L +LL L+ R +++ + + L I + +QLA+K+
Sbjct: 627 SGGPVHFVKKHKRESLLAKLLTVWLAKRKEIRKTLASC--TDPALKTILDKQQLAIKVTC 684
Query: 1399 NVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV----------------NENEK 1442
N YG+T SG +PC +A+++ GR LE++ +FV + +
Sbjct: 685 NAVYGFTGVA-SGILPCLNIAETVTLQGRKMLERSQAFVEAISPERLAGLLRRPIDVSPD 743
Query: 1443 WKAKVIYGDTDRYTVC 1458
+ KVIYGDTD +C
Sbjct: 744 ARFKVIYGDTDSLFIC 759
>gi|312275146|gb|ADQ57883.1| core gene UL30 family protein [Human herpesvirus 8]
gi|402797601|gb|AFQ99132.1| core gene UL30 family protein [Human herpesvirus 8]
Length = 1012
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 230/496 (46%), Gaps = 73/496 (14%)
Query: 990 NDSDHAVEIYVLLYC--KSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSF 1041
D D ++I +L+ + + R L+G+ C +VF E + + F+ +L +
Sbjct: 310 QDEDMIIQISCVLHTVGNDKPYTRMLLGLGTCDPLPGVEVFEFPSEYDMLAAFLSMLRDY 369
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDS-EISE-RGITDNM 1099
+ + + G++I L ++ RA + L D + KI G E+ + RG +D
Sbjct: 370 NVEFITGYNIANFDLPYIIARATQVYDFKLQDFT------KIKTGSVFEVHQPRGGSDG- 422
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
+ R+ S + + G + ++++++ R ++ L+ Y ++ VA+
Sbjct: 423 ------------------GNFMRSQ-SKVKISGIVPIDMYQVCREKLSLSDYKLDTVAKQ 463
Query: 1160 VLRRKIPSIPFRVLTKWFASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARV 1218
L R+ I ++ + F SGP GRA+ Y V + L ++++ + SE+A++
Sbjct: 464 CLGRQKDDISYKDIPPLFKSGPDGRAKVG--NYCVIDSVLVMDLLLRFQTHVEISEIAKL 521
Query: 1219 FGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFY 1278
I VL+ G Q RV S LL A T+ Y+ P V+ V+ P GFY
Sbjct: 522 AKIPTRRVLTDGQQIRVFSCLLEAAATEGYILPVPKGDAVSGYQGAT----VISPSPGFY 577
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLI 1338
DPV+V+DF SLYPS++ A+NLC+ T ++P S H+ D + ++
Sbjct: 578 DDPVLVVDFASLYPSIIQAHNLCYST----LIPG-------DSLHLHPHLSPDDYETFVL 626
Query: 1339 PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIA 1398
V +V R+ +L +LL L+ R +++ + + L I + +QLA+K+
Sbjct: 627 SGGPVHFVKKHKRESLLAKLLTVWLAKRKEIRKTLASC--TDPALKTILDKQQLAIKVTC 684
Query: 1399 NVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF----------------VNENEK 1442
N YG+T SG +PC +A+++ GR LE++ +F V+ +
Sbjct: 685 NAVYGFTGVA-SGILPCLNIAETVTLQGRKMLERSQAFVEAISPERLAGLLRRPVDVSPD 743
Query: 1443 WKAKVIYGDTDRYTVC 1458
+ KVIYGDTD +C
Sbjct: 744 ARFKVIYGDTDSLFIC 759
>gi|139472809|ref|YP_001129355.1| ORF9 [Human herpesvirus 8]
gi|87196827|gb|ABD28853.1| ORF9 [Human herpesvirus 8]
Length = 1012
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 230/496 (46%), Gaps = 73/496 (14%)
Query: 990 NDSDHAVEIYVLLYC--KSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSF 1041
D D ++I +L+ + + R L+G+ C +VF E + + F+ +L +
Sbjct: 310 QDEDMIIQISCVLHTVGNDKPYTRMLLGLGTCDPLPGVEVFEFPSEYDMLAAFLSMLRDY 369
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDS-EISE-RGITDNM 1099
+ + + G++I L ++ RA + L D + KI G E+ + RG +D
Sbjct: 370 NVEFITGYNIANFDLPYIIARATQVYDFKLQDFT------KIKTGSVFEVHQPRGGSDG- 422
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
+ R+ S + + G + ++++++ R ++ L+ Y ++ VA+
Sbjct: 423 ------------------GNFMRSQ-SKVKISGIVPIDMYQVCREKLSLSDYKLDTVAKQ 463
Query: 1160 VLRRKIPSIPFRVLTKWFASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARV 1218
L R+ I ++ + F SGP GRA+ Y V + L ++++ + SE+A++
Sbjct: 464 CLGRQKDDISYKDIPPLFKSGPDGRAKVG--NYCVIDSVLVMDLLLRFQTHVEISEIAKL 521
Query: 1219 FGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFY 1278
I VL+ G Q RV S LL A T+ Y+ P V+ V+ P GFY
Sbjct: 522 AKIPTRRVLTDGQQIRVFSCLLEAAATEGYILPVPKGDAVSGYQGAT----VISPSPGFY 577
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLI 1338
DPV+V+DF SLYPS++ A+NLC+ T ++P S H+ D + ++
Sbjct: 578 DDPVLVVDFASLYPSIIQAHNLCYST----LIPG-------DSLHLHPHLSPDDYETFVL 626
Query: 1339 PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIA 1398
V +V R+ +L +LL L+ R +++ + + L I + +QLA+K+
Sbjct: 627 SGGPVHFVKKHKRESLLAKLLTVWLAKRKEIRKTLASC--TDPALKTILDKQQLAIKVTC 684
Query: 1399 NVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF----------------VNENEK 1442
N YG+T SG +PC +A+++ GR LE++ +F V+ +
Sbjct: 685 NAVYGFTGVA-SGILPCLNIAETVTLQGRKMLERSQAFVEAISPERLAGLLRRPVDVSPD 743
Query: 1443 WKAKVIYGDTDRYTVC 1458
+ KVIYGDTD +C
Sbjct: 744 ARFKVIYGDTDSLFIC 759
>gi|2246468|gb|AAB62593.1| ORF 09 [Human herpesvirus 8]
Length = 1012
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 230/496 (46%), Gaps = 73/496 (14%)
Query: 990 NDSDHAVEIYVLLYC--KSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSF 1041
D D ++I +L+ + + R L+G+ C +VF E + + F+ +L +
Sbjct: 310 QDEDMIIQISCVLHTVGNDKPYTRMLLGLGTCDPLPGVEVFEFPSEYDMLAAFLSMLRDY 369
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDS-EISE-RGITDNM 1099
+ + + G++I L ++ RA + L D + KI G E+ + RG +D
Sbjct: 370 NVEFITGYNIANFDLPYIIARATQVYDFKLQDFT------KIKTGSVFEVHQPRGGSDG- 422
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
+ R+ S + + G + ++++++ R ++ L+ Y ++ VA+
Sbjct: 423 ------------------GNFMRSQ-SKVKISGIVPIDMYQVCREKLSLSDYKLDTVAKQ 463
Query: 1160 VLRRKIPSIPFRVLTKWFASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARV 1218
L R+ I ++ + F SGP GRA+ Y V + L ++++ + SE+A++
Sbjct: 464 CLGRQKDDISYKDIPPLFKSGPDGRAKVG--NYCVIDSVLVMDLLLRFQTHVEISEIAKL 521
Query: 1219 FGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFY 1278
I VL+ G Q RV S LL A T+ Y+ P V+ V+ P GFY
Sbjct: 522 AKIPTRRVLTDGQQIRVFSCLLEAAATEGYILPVPKGDAVSGYQGAT----VISPSPGFY 577
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLI 1338
DPV+V+DF SLYPS++ A+NLC+ T ++P S H+ D + ++
Sbjct: 578 DDPVLVVDFASLYPSIIQAHNLCYST----LIPG-------DSLHLHPHLSPDDYETFVL 626
Query: 1339 PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIA 1398
V +V R+ +L +LL L+ R +++ + + L I + +QLA+K+
Sbjct: 627 SGGPVHFVKKHKRESLLAKLLTVWLAKRKEIRKTLASC--TDPALKTILDKQQLAIKVTC 684
Query: 1399 NVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV----------------NENEK 1442
N YG+T SG +PC +A+++ GR LE++ +FV + +
Sbjct: 685 NAVYGFTGVA-SGILPCLNIAETVTLQGRKMLERSQAFVEAISPERLAGLLRRPIDVSPD 743
Query: 1443 WKAKVIYGDTDRYTVC 1458
+ KVIYGDTD +C
Sbjct: 744 ARFKVIYGDTDSLFIC 759
>gi|218199296|gb|EEC81723.1| hypothetical protein OsI_25344 [Oryza sativa Indica Group]
gi|222636653|gb|EEE66785.1| hypothetical protein OsJ_23524 [Oryza sativa Japonica Group]
Length = 316
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 98/149 (65%), Gaps = 9/149 (6%)
Query: 1044 DILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEP 1103
DI++GW+IQ GSLGF AE A GIGLL ISRTP + + E + P
Sbjct: 175 DIIVGWEIQLGSLGFFAEGA---GIGLLKRISRTPPNQMKHPPMNPVEE-----SCQEFP 226
Query: 1104 VVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRR 1163
+ + D E W THASG+HV GRI+LN+WRLMR E+KLN Y++EAVA+ VL R
Sbjct: 227 GASSADDVIDDASESNWSHTHASGIHVDGRIILNLWRLMRAEIKLNNYSLEAVADEVL-R 285
Query: 1164 KIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
K+P +P ++L +WFA+GPGR RYRC+EYV
Sbjct: 286 KVPLVPTKILNRWFATGPGRGRYRCIEYV 314
>gi|298675626|ref|YP_003727376.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
gi|298288614|gb|ADI74580.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
Length = 913
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 226/485 (46%), Gaps = 75/485 (15%)
Query: 974 PDPRYDSINVVALAFENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHLFSH 1033
P+P I +++L+FE ++ ++L CK+ S D ++F +E + +
Sbjct: 192 PEPESSPIIMISLSFE--PEYKGNNTLVLVCKNLKDVES-----DIEIF--DEEEDMLTR 242
Query: 1034 FIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISER 1093
F I +DPD+++G+++ + ++ +RA +L G S +
Sbjct: 243 FFDIFQEYDPDVVVGYNMNDFDIPYIKDRADYLN----------------NKGASIVPRV 286
Query: 1094 GITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTV 1153
G ++ + RT S + GRIV++ L+R + L YT+
Sbjct: 287 GRDGRLMTYRRLG--------------TRTMVS---MTGRIVMDTLPLIRQQFSLKRYTL 329
Query: 1154 EAVAETVL-RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRT 1212
V++ +L R K+ P +++ W G ++ ++Y ++L LE++ +L ++++
Sbjct: 330 RNVSKELLGREKLDVEPHQMVEYWNDGGEKTKKF--IDYARRDSELALELVTKLQLLDKY 387
Query: 1213 SELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ-NYLAISPGNHQVASQPAMECLP-LV 1270
L++V G V+ G VE++L R Q + P N ++ E V
Sbjct: 388 IALSQVSGSVLQDVVDGGQSSMVENLLFREFGKQGRVIPPKPDNRPDDNEQGEEIKGGEV 447
Query: 1271 MEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLR 1330
+EP+ G D VV+LD++SLYP++M+A+NLC+ T + P+ E
Sbjct: 448 LEPKKGL-LDNVVILDYKSLYPTIMMAHNLCYTTVVVNDHPNGET--------------- 491
Query: 1331 DLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNAR 1390
+ PP+G +V P V KG++P +LE +L+ R VK+ +K ++ +R+++A
Sbjct: 492 ------INPPSGGEFVNPDVLKGIVPSILETLLNQRSEVKKKMKSISDGDT--YRMYDAT 543
Query: 1391 QLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYG 1450
QLALK++ N YGY+ R+ LA+++ GR ++ +N N + KV+
Sbjct: 544 QLALKILLNSFYGYSGYA-RARLYSLTLANAVTSYGRENIQNTRDLINNNIR---KVVLK 599
Query: 1451 DTDRY 1455
D Y
Sbjct: 600 DNQAY 604
>gi|115473971|ref|NP_001060584.1| Os07g0669000 [Oryza sativa Japonica Group]
gi|34395195|dbj|BAC83595.1| DNA polymerase zeta catalytic subunit-like protein [Oryza sativa
Japonica Group]
gi|113612120|dbj|BAF22498.1| Os07g0669000 [Oryza sativa Japonica Group]
gi|215708854|dbj|BAG94123.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 146
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 90/116 (77%), Gaps = 2/116 (1%)
Query: 8 SNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
S + SVRIVS+D+YMAPP+PG+D YS GG+V EVPVIR+YGSTPAGQKTCLHIHR L
Sbjct: 15 SPVLSVRIVSLDYYMAPPLPGFDFSYSHFHGGEVEEVPVIRIYGSTPAGQKTCLHIHRVL 74
Query: 68 PYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLVRAKK 123
P+LYVPC + + ++ + ++ + LEKAL+++ S SK++HVH C+LVRAKK
Sbjct: 75 PFLYVPCKEDLLHNVEKGNSFISGLLSDLEKALQIRSS--SKKKHVHGCTLVRAKK 128
>gi|384253110|gb|EIE26585.1| DNA/RNA polymerase [Coccomyxa subellipsoidea C-169]
Length = 1425
Score = 146 bits (369), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 206/454 (45%), Gaps = 59/454 (12%)
Query: 1020 KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER--AAHLGIGLLNDISRT 1077
++ V E + +++ L DPDIL + ++ +LG LAER A L G L+
Sbjct: 621 RMHVHPSEEAMLQAWLQWLRKADPDILNVFQVRD-TLGALAERFTALKLNSGGLHLSRLK 679
Query: 1078 PLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLN 1137
+ K A + ++ P +S + E R H+ GR+VL+
Sbjct: 680 RMHGKALA---------LKRIVMYSPAWVKSQNRMASTSNQETFRVE----HMEGRVVLD 726
Query: 1138 VWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA-SGPGRA-------RYRCV 1189
V R L +++ +++L R++ +P +T+ + S P R+ R R
Sbjct: 727 VLRHALTACNLASFSLVDCCQSLLSRRMEVLPPSAITRLSSLSNPARSKGEQAADRARLA 786
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
Y R + ++ +L + E+ RV G+ VL R S+LLR A Y+
Sbjct: 787 SYAADRVGVVRALLQRLATLPEAIEIGRVTGLTLGQVLYNAQMIRTWSLLLRNAQRSGYI 846
Query: 1250 AISPGNHQVASQPAMECLPLVMEP----ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
+ + + P E P +M P G Y PV +LDF SLYPS+ AYNLC+ T
Sbjct: 847 V----SGRQDALPLSES-PYLMHPVETKNVGLYQSPVAILDFASLYPSLYRAYNLCYTTL 901
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
L P N +F P+ HV + P G +YV P++RKG+LP +L +++
Sbjct: 902 LH---PDDSN-----AFVPE-HV--------TVTPTGDVYVKPEIRKGILPSILAALINA 944
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R + A+K+ Q+ + ++RQ ALKL AN YG+T A S + C LADS +
Sbjct: 945 RAATRAALKEATSPAQMA--VLDSRQKALKLTANALYGFTGAQASP-LQCVPLADSCLAL 1001
Query: 1426 GRSTLEKAISFVNENEK------WKAKVIYGDTD 1453
G + +AI + E + AKVIYG TD
Sbjct: 1002 GAQSCRRAIELLTEAFQKGVFGSKDAKVIYGQTD 1035
>gi|312103963|ref|XP_003150285.1| hypothetical protein LOAG_14745 [Loa loa]
Length = 150
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 87/116 (75%), Gaps = 4/116 (3%)
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA--ISP 1253
+LNL I+ +LD +TSE+AR++GI F VL+RGSQ+RVESMLLRLA + Y+A ISP
Sbjct: 14 CQLNLSILLRLDFFTKTSEMARLYGIQFNEVLTRGSQFRVESMLLRLARQEKYVAPSISP 73
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
P E LPL MEPESGFY DPV+VLDFQSLYPS++IAYN CF TCLGKI
Sbjct: 74 AQRGAMCSP--ETLPLTMEPESGFYRDPVIVLDFQSLYPSIIIAYNYCFTTCLGKI 127
>gi|68063595|ref|XP_673793.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491898|emb|CAI02404.1| hypothetical protein PB300723.00.0 [Plasmodium berghei]
Length = 580
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 140/266 (52%), Gaps = 30/266 (11%)
Query: 1201 EIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH-QVA 1259
++++L I E+ARV G F +L+RG Q V S L R NY I P + +V+
Sbjct: 1 RLIDKLLFIYNYVEMARVTGTPFVYLLTRGQQIXVTSQLYRKCKELNY--IIPSTYIKVS 58
Query: 1260 SQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGV 1319
+ E V+EP G+Y +P+ LDF SLYPS+MIA+NLC+ T + +N +
Sbjct: 59 NNDKFEG-ATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLI-------KNNDEI 110
Query: 1320 SSFRPDLHVLRDLKDELLIPP--NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA 1377
S DL+ K+++ P N +V V++GVLP ++EE++ R VK +K
Sbjct: 111 S----DLN-----KNDITTVPGKNNFKFVKGNVKRGVLPLIVEELIRARKNVKAMMKN-- 159
Query: 1378 PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
I + N RQLALK+ AN YGYT A G++PC E+A SI GRS +EK V
Sbjct: 160 EQNPITKMVLNGRQLALKISANSVYGYTGAAAGGQLPCLEIATSITTFGRSMIEKTKETV 219
Query: 1438 ------NENEKWKAKVIYGDTDRYTV 1457
N + A V+YGDTD V
Sbjct: 220 EAYYCKNNGFEHNATVVYGDTDSVMV 245
>gi|397619624|gb|EJK65338.1| hypothetical protein THAOC_13810 [Thalassiosira oceanica]
Length = 359
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 162/327 (49%), Gaps = 38/327 (11%)
Query: 1142 MRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
M+ KL+ Y++ +V L ++ + +++ A G R+R Y + A L
Sbjct: 5 MQRNHKLSSYSLNSVCAEFLSQQKEDVHHSIISDLQA-GSDADRHRLAVYCLKDANLPQR 63
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQ 1261
+M++L ++ E+ARV G+ ++SRG Q +V SM+LR N L + A
Sbjct: 64 LMDKLSVLINYVEMARVTGVPVSFLISRGQQIKVFSMILRKCRDVNLLVPTLKKSGPAGD 123
Query: 1262 PAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG-----KILPSKENT 1316
E V++P FY P+ LDF SLYPS+M AYNLC+ T + + PSK
Sbjct: 124 EGYEG-ATVLDPIKQFYQVPIATLDFASLYPSIMQAYNLCYSTMVSGQDAKNVDPSKYK- 181
Query: 1317 LGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL 1376
K E NG +V +V+KG+LP +L E+LS R K+ +K
Sbjct: 182 ----------------KSE-----NGHAFVHSEVKKGILPTILGELLSARKRAKRDMKN- 219
Query: 1377 APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF 1436
AP+ + + N RQLALK+ AN YG+T A G++PC +A S+ GR LEK ++
Sbjct: 220 APN-EFEKAVQNGRQLALKISANSVYGFTGASV-GQLPCVPIASSVTSYGRYLLEKTKAY 277
Query: 1437 VNEN------EKWKAKVIYGDTDRYTV 1457
V E + A+V+YGDTD V
Sbjct: 278 VEETYTQTNGYEHDAQVVYGDTDSVMV 304
>gi|313208671|emb|CBH41123.1| DNA polymerase delta, partial [Echinococcus shiquicus]
Length = 350
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 148/281 (52%), Gaps = 18/281 (6%)
Query: 1179 SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
+G + R R Y + A L L ++++L + + E+ARV G+ +L RG Q +V S
Sbjct: 17 NGNDQTRRRLAVYCLKDAYLPLLLLDKLMSVANSVEMARVTGVPIAYLLKRGQQVKVISQ 76
Query: 1239 LLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAY 1298
LLR A L + Q Q V+EP GFY +P+ LDF SLYPS+M+A+
Sbjct: 77 LLRKAREHGLLLPT----QRPGQGDEYVGGTVIEPRRGFYNEPIATLDFSSLYPSIMVAH 132
Query: 1299 NLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRL 1358
NLC+ T L S G+ S + ++ D+ + P G +V +RKG+LP +
Sbjct: 133 NLCYTTLLRPEDISASG--GIGSLLANYNL---GPDDCIRTPTGAYFVKKHIRKGLLPCV 187
Query: 1359 LEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAEL 1418
LE++L R+ K+ + A + Q R+ + RQLALK+ AN YG+T A G++PC E+
Sbjct: 188 LEQLLEARMKAKREMA--AETDQFRRRVLDGRQLALKVSANSVYGFTGA-HVGKLPCLEI 244
Query: 1419 ADSIVQCGRSTLEKAISFVNEN------EKWKAKVIYGDTD 1453
+ SI GR +E+ + E K AKVIYGDTD
Sbjct: 245 SSSISGFGREMIEETKRLIEEKFTTGNGYKSDAKVIYGDTD 285
>gi|62954913|gb|AAY23282.1| Similar to dna polymerase delta catalytic subunit (ec 2.7.7.7) [Oryza
sativa Japonica Group]
Length = 629
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 28/269 (10%)
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L ++++L I E+ARV G+ +LSRG +V S LLR A +N L I
Sbjct: 44 AYLPQRLLDKLMYIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN-LVIPNIK 102
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
Q + Q E V+E +GFY P+ LDF SLYPS+M+AYNLC+CT ++P +
Sbjct: 103 GQASGQDTFEG-ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCT----LVPPE-- 155
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
D L + + P+G +V P V+KG+LP +LEE+L+ R K+A
Sbjct: 156 ---------DARKLNLPPESVNKTPSGETFVKPDVQKGILPEILEELLAAR---KRAKAD 203
Query: 1376 LAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
L ++ R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +E
Sbjct: 204 LKEAKDPFERAVLDGRQLALKISANSVYGFTGATV-GQLPCLEISSSVTSYGRQMIEHTK 262
Query: 1435 SFVNEN------EKWKAKVIYGDTDRYTV 1457
V + + A+VIYGDTD V
Sbjct: 263 KLVEDKFTTLGGYEHNAEVIYGDTDSVMV 291
>gi|313208682|emb|CBH41126.1| DNA polymerase delta, partial [Echinococcus felidis]
gi|313208687|emb|CBH41128.1| DNA polymerase delta, partial [Echinococcus equinus]
Length = 350
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 133/251 (52%), Gaps = 18/251 (7%)
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
+ + E+ARV G+ +L RG Q +V S LLR A L + Q Q
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPGQGDEYVGG 102
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHV 1328
V+EP GFY +P+ LDF SLYPS+M+A+NLC+ T L S G+ S + ++
Sbjct: 103 TVIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLRPEDISASG--GIGSLLANYNL 160
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
D+ + P G +V +RKG+LP +LE++L R+ K+ + A + Q R+ +
Sbjct: 161 ---GPDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARMKAKREMA--AETDQFRRRVLD 215
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN------EK 1442
RQLALK+ AN YG+T A G++PC E++ SI GR +E+ + E K
Sbjct: 216 GRQLALKVSANSVYGFTGA-HVGKLPCLEISSSISGFGREMIEETKRLLEEKFTTGNGYK 274
Query: 1443 WKAKVIYGDTD 1453
AKVIYGDTD
Sbjct: 275 SDAKVIYGDTD 285
>gi|151368513|gb|ABH05847.2| DNA polymerase [Pipistrellus nathusii rhadinovirus 1]
Length = 764
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 200/436 (45%), Gaps = 46/436 (10%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
IP+ +VF E+ L F +L ++ + + G++I +L +RA ++ L D +
Sbjct: 361 IPNTQVFEFPSELDLLYAFFAMLRDYNIEFVTGYNIANFDFPYLIDRATNVYNFCLKDFA 420
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R + + S G + S + + G +
Sbjct: 421 RVKTGAVFEVYKPKDSGSGFMRAV--------------------------SKIKITGLVA 454
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++++ + R ++ L+ Y + VA+ ++ K + ++ + F +GP R + Y V
Sbjct: 455 IDMYIVCREKLSLSDYKLNTVAQHCMKSKKDDVTYKQIPGLFRAGP-EGRGKLGAYCVQD 513
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY-LAISPG 1254
A L ++++ Q SE+A++ I VL G Q RV S LL A +NY L I
Sbjct: 514 AVLVMDLLKQFVTHVEISEIAKLANIPVRRVLYDGQQIRVFSCLLAAARAENYILPIPES 573
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
Q A V+ P GFY +PV+V+DF SLYPS++ A+NLC+CT ++P
Sbjct: 574 RANEGYQGAT-----VITPIPGFYDNPVLVVDFASLYPSIIQAHNLCYCT----LIPHDR 624
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
+ PD + + +I V +V + +L RLL L+ R +++ +
Sbjct: 625 LPQFSGNLAPDDY------ETFVISSGPVHFVKKHKCESLLSRLLTTWLAKRKAIREELA 678
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
+ Q + I + +QLA+K+ N YG+T SG +PC ++A+++ GR+ LEK+
Sbjct: 679 HCEDNTQKV--ILDKQQLAIKVTCNSVYGFTGVA-SGLLPCLKIAETVTLQGRTMLEKSK 735
Query: 1435 SFVNENEKWKAKVIYG 1450
+++ + K IYG
Sbjct: 736 AYIEAMNPTRVKEIYG 751
>gi|313208674|emb|CBH41124.1| DNA polymerase delta, partial [Echinococcus vogeli]
Length = 350
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 133/251 (52%), Gaps = 18/251 (7%)
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
+ + E+ARV G+ +L RG Q +V S LLR A L + Q Q
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPGQGDEYVGG 102
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHV 1328
V+EP GFY +P+ LDF SLYPS+M+A+NLC+ T L S G+ S + ++
Sbjct: 103 TVIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLRPEDISASG--GIGSLLANYNL 160
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
D+ + P G +V +RKG+LP +LE++L R+ K+ + A + Q R+ +
Sbjct: 161 ---GPDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARMKAKREMA--AETDQFRRRVLD 215
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN------EK 1442
RQLALK+ AN YG+T A G++PC E++ SI GR +E+ + E K
Sbjct: 216 GRQLALKVSANSVYGFTGAQV-GKLPCLEISSSISGFGREMIEETKRLLEEKFTTGNGYK 274
Query: 1443 WKAKVIYGDTD 1453
AKVIYGDTD
Sbjct: 275 SDAKVIYGDTD 285
>gi|154276096|ref|XP_001538893.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus NAm1]
gi|150413966|gb|EDN09331.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus NAm1]
Length = 1086
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 148/286 (51%), Gaps = 28/286 (9%)
Query: 1179 SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
+G +R R Y + A L +M++L + +E+ARV G+ F +LSRG Q + S
Sbjct: 477 NGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQ 536
Query: 1239 LLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAY 1298
L R A Q + + N + Q V+EP FY P+ LDF SLYPS++ A+
Sbjct: 537 LFRKALEQQLVIPNLRNESTSEQYEGAT---VIEPIRDFYDVPIATLDFASLYPSIIQAH 593
Query: 1299 NLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRL 1358
NLC+ T L K++T+ D H +++ +D ++ PNG + KVRKG+L ++
Sbjct: 594 NLCYTTLL------KKSTI-------DAHQMKEGED-YIVTPNGDRFCTSKVRKGLLTQI 639
Query: 1359 LEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
LEE+L R K+A K+LA + + N RQLALK+ AN YG T A G++PC
Sbjct: 640 LEELLGAR---KRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLP 695
Query: 1418 LADSIVQCGRSTLEK------AISFVNENEKWKAKVIYGDTDRYTV 1457
+A S GR +EK A + AKV+YGDTD V
Sbjct: 696 IASSTTSYGRQMIEKTKEEVEAKYTIANGYSHDAKVVYGDTDSVMV 741
>gi|313208690|emb|CBH41129.1| DNA polymerase delta, partial [Echinococcus ortleppi]
gi|313208694|emb|CBH41130.1| DNA polymerase delta, partial [Echinococcus canadensis]
gi|313208698|emb|CBH41131.1| DNA polymerase delta, partial [Echinococcus canadensis]
gi|313208701|emb|CBH41132.1| DNA polymerase delta, partial [Echinococcus canadensis]
Length = 350
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 149/285 (52%), Gaps = 26/285 (9%)
Query: 1179 SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
+G + R R Y + A L L ++++L + + E+ARV G+ +L RG Q +V S
Sbjct: 17 NGNDQTRRRLAVYCLKDAYLPLLLLDKLMSVANSVEMARVTGVPIAYLLKRGQQVKVISQ 76
Query: 1239 LLRLAHTQNYLAIS----PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSM 1294
LLR A L + G+ V V+EP GFY +P+ LDF SLYPS+
Sbjct: 77 LLRKAREHGLLLPTHRPGQGDEYVGGT--------VIEPRRGFYNEPIATLDFSSLYPSI 128
Query: 1295 MIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGV 1354
M+A+NLC+ T L S G+ S + ++ D+ + P G +V +RKG+
Sbjct: 129 MVAHNLCYTTLLRPEDISASG--GIGSLLANYNL---GPDDYIRTPTGAYFVKKHIRKGL 183
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMP 1414
LP +LE++L R+ K+ + A + Q R+ + RQLALK+ AN YG+T A G++P
Sbjct: 184 LPCVLEQLLEARMKAKREMA--AETDQFRRRVLDGRQLALKVSANSVYGFTGA-HVGKLP 240
Query: 1415 CAELADSIVQCGRSTLEKAISFVNEN------EKWKAKVIYGDTD 1453
C E++ SI GR +E+ + E K AKVIYGDTD
Sbjct: 241 CLEISSSISGFGREMIEETKRLLEEKFTTGNGYKSDAKVIYGDTD 285
>gi|313208684|emb|CBH41127.1| DNA polymerase delta, partial [Echinococcus granulosus]
Length = 350
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 131/251 (52%), Gaps = 18/251 (7%)
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
+ + E+ARV G+ +L RG Q +V S LLR A L + Q Q
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPDQGDEYVGG 102
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHV 1328
V+EP GFY +P+ LDF SLYPS+M+A+NLC+ T L S +G +L
Sbjct: 103 TVIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTFLRPEDISASGGIGGLLANYNLG- 161
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
D+ + P G +V +RKG+LP +LE++L R+ K+ + A + Q R+ +
Sbjct: 162 ----PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARMKAKREMA--AETDQFRRRVLD 215
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN------EK 1442
RQLALK+ AN YG+T A G++PC E++ SI GR +E+ + E K
Sbjct: 216 GRQLALKVSANSVYGFTGA-HVGKLPCLEISSSISGFGREMIEETKRLLEEKFTTGNGYK 274
Query: 1443 WKAKVIYGDTD 1453
AKVIYGDTD
Sbjct: 275 SDAKVIYGDTD 285
>gi|340343166|emb|CCA95020.1| DNA polymerase delta, partial [Taenia twitchelli]
Length = 307
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 130/247 (52%), Gaps = 20/247 (8%)
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E+ARV G+ +L RG Q +V S LLR A L + Q Q V+EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVISQLLRKARGHGLLLPT----QRPGQGDEYVGGTVIEP 64
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK 1333
+ GFY +P+ LDF SLYPS+M+A+NLC+ T L K + S +L +L
Sbjct: 65 QRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL------KSEDISASGGISNLLAKYNLG 118
Query: 1334 -DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
D+ + P G +V +RKG+LP +LE++L R K+ + +A + R+ + RQL
Sbjct: 119 PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTRAKR--ETVAETDHFKRRVLDGRQL 176
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF------VNENEKWKAK 1446
ALK+ AN YG+T A G++PC E++ SI GR +E+ + K AK
Sbjct: 177 ALKVSANSVYGFTGAQV-GKLPCLEISSSISGFGREMIEETKRLLEGRFTIGNGYKSNAK 235
Query: 1447 VIYGDTD 1453
VIYGDTD
Sbjct: 236 VIYGDTD 242
>gi|443719045|gb|ELU09366.1| hypothetical protein CAPTEDRAFT_106116 [Capitella teleta]
Length = 349
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 107/188 (56%), Gaps = 36/188 (19%)
Query: 11 FSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPYL 70
FS+RIV+ H+ A P+PG D+C+S + V VPV+R++G+TPAGQKTC+H+H PYL
Sbjct: 5 FSLRIVTTTHHQAAPVPGLDVCHSEFRSTPVYRVPVLRIFGATPAGQKTCMHVHGIFPYL 64
Query: 71 YVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRA-------- 121
YVP D P+ + Y+ + +L+KAL + A S QHV++ ++V
Sbjct: 65 YVP-HDGPLPTTR----YLQQFAASLDKALNIALNRANSPAQHVYKIAVVAGIPMYGYHA 119
Query: 122 ----------------KK------GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHL 159
KK GGAV +++ QPHESHIP+ Q +DYNLYGM LH
Sbjct: 120 EEQAFLKIFLYNPNMVKKVADLLLGGAVMNRAFQPHESHIPYHQQVFIDYNLYGMNLLHT 179
Query: 160 SKLKFRHP 167
+ +KFR P
Sbjct: 180 AAVKFRRP 187
>gi|313208723|emb|CBH41138.1| DNA polymerase delta, partial [Taenia serialis]
Length = 307
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 129/247 (52%), Gaps = 20/247 (8%)
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E+ARV G+ +L RG Q +V S LLR A L + Q Q V+EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRPGQGDEYVGGTVIEP 64
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK 1333
+ GFY +P+ LDF SLYPS+M+A+NLC+ T L K + S L +L
Sbjct: 65 QRGFYNEPITTLDFSSLYPSIMVAHNLCYTTLL------KPEDISASGGISGLLANYNLG 118
Query: 1334 -DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
D+ + P G +V +RKG+LP +LE++L R K+ + A + R+ + RQL
Sbjct: 119 PDDYIKTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREMA--AETDHFRRRVLDGRQL 176
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE------NEKWKAK 1446
ALK+ AN YG+T A G++PC E++ SI GR +E+ + E K AK
Sbjct: 177 ALKVSANSVYGFTGAQV-GKLPCLEISSSISGFGREMIEETKRLLEERFTIGNGYKGDAK 235
Query: 1447 VIYGDTD 1453
VIYGDTD
Sbjct: 236 VIYGDTD 242
>gi|340343158|emb|CCA95016.1| DNA polymerase delta, partial [Taenia martis]
Length = 307
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 130/247 (52%), Gaps = 20/247 (8%)
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E+ARV G+ +L RG Q +V S LLR A L + Q Q V+EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVISQLLRKARGHGLLLPT----QRPGQGDEYVGGTVIEP 64
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK 1333
+ GFY +P+ LDF SLYPS+M+A+NLC+ T L K + S +L +L
Sbjct: 65 QRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL------KPEDISASGGISNLLAKYNLG 118
Query: 1334 -DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
D+ + P G +V +RKG+LP +LE++L R K+ + +A + R+ + RQL
Sbjct: 119 PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM--VAETDHFKRRVLDGRQL 176
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF------VNENEKWKAK 1446
ALK+ AN YG+T A G++PC E++ SI GR +E+ + K AK
Sbjct: 177 ALKVSANSVYGFTGAQV-GKLPCLEISSSISGFGREMIEETKRLLEGRFTIGNGYKSNAK 235
Query: 1447 VIYGDTD 1453
VIYGDTD
Sbjct: 236 VIYGDTD 242
>gi|313208664|emb|CBH41122.1| DNA polymerase delta, partial [Echinococcus multilocularis]
Length = 350
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 18/281 (6%)
Query: 1179 SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
+G + R R Y + A L L ++++L + + E+ARV G+ +L RG Q +V S
Sbjct: 17 NGNDQTRRRLAVYCLKDAYLPLLLLDKLMSVANSVEMARVTGVPIAYLLKRGQQVKVISQ 76
Query: 1239 LLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAY 1298
LLR A L + Q Q V+EP GFY +P+ LDF SLYPS+M+A+
Sbjct: 77 LLRKAREHGLLLPT----QRPGQGDEYVGGTVIEPRRGFYNEPIATLDFSSLYPSIMVAH 132
Query: 1299 NLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRL 1358
NLC+ T L S G+ S + ++ D+ + P G +V +RKG+LP +
Sbjct: 133 NLCYTTLLRPEDISASG--GIGSLLANYNL---GPDDYIRTPTGAYFVKKHIRKGLLPCV 187
Query: 1359 LEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAEL 1418
LE++L R+ K+ + A + R+ + RQLALK+ AN YG+T A G++PC E+
Sbjct: 188 LEQLLEARMKAKREMA--AETDHFRRRVLDGRQLALKVSANSVYGFTGA-HVGKLPCLEI 244
Query: 1419 ADSIVQCGRSTLEKAISFVNEN------EKWKAKVIYGDTD 1453
+ SI GR +E+ + E K AKVIYGDTD
Sbjct: 245 SSSISGFGREMIEETKRLLEEKFTTRNGYKSDAKVIYGDTD 285
>gi|313208705|emb|CBH41133.1| DNA polymerase delta, partial [Taenia solium]
Length = 307
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 129/247 (52%), Gaps = 20/247 (8%)
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E+ARV G+ +L RG Q +V S LLR A L + Q Q V+EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRPGQGDEYVGGTVIEP 64
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK 1333
+ GFY +P+ LDF SLYPS+M+A+NLC+ T L K + S L +L
Sbjct: 65 QRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL------KPEDISASGGISGLLANYNLG 118
Query: 1334 -DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
D+ + P G +V +RKG+LP +LE++L R K+ + +A + R+ + RQL
Sbjct: 119 PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTRAKREM--VAETDHFRRRVLDGRQL 176
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF------VNENEKWKAK 1446
ALK+ AN YG+T A G++PC E++ SI GR +E+ + K AK
Sbjct: 177 ALKVSANSVYGFTGAQV-GKLPCLEISSSISGIGREMIEETKRLLEGRFTIGNGYKGDAK 235
Query: 1447 VIYGDTD 1453
VIYGDTD
Sbjct: 236 VIYGDTD 242
>gi|340343156|emb|CCA95015.1| DNA polymerase delta, partial [Taenia madoquae]
Length = 307
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 129/247 (52%), Gaps = 20/247 (8%)
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E+ARV G+ +L RG Q +V S LLR A L + Q Q V+EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRPGQGDEYVGGTVIEP 64
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK 1333
+ GFY +P+ LDF SLYPS+M+A+NLC+ T L K + S L +L
Sbjct: 65 QRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL------KPEDISASGGISGLLANYNLG 118
Query: 1334 -DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
D+ + P G +V +RKG+LP +LE++L R K+ + +A + R+ + RQL
Sbjct: 119 PDDYIKTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM--VAETDHFRRRVLDGRQL 176
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF------VNENEKWKAK 1446
ALK+ AN YG+T A G++PC E++ SI GR +E+ + K AK
Sbjct: 177 ALKVSANSVYGFTGAQV-GKLPCLEISSSISGFGREMIEETKRLLEGRFTIGNGYKGDAK 235
Query: 1447 VIYGDTD 1453
VIYGDTD
Sbjct: 236 VIYGDTD 242
>gi|340343160|emb|CCA95017.1| DNA polymerase delta, partial [Taenia ovis]
Length = 307
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 129/247 (52%), Gaps = 20/247 (8%)
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E+ARV G+ +L RG Q +V S LLR A L + Q Q V+EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRPGQGDEYVGGTVIEP 64
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK 1333
+ GFY +P+ LDF SLYPS+M+A+NLC+ T L K + S L +L
Sbjct: 65 QRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL------KPEDISASGGISGLLANYNLG 118
Query: 1334 -DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
D+ + P G +V +RKG+LP +LE++L R K+ + +A + R+ + RQL
Sbjct: 119 PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM--VAETDHFRRRVLDGRQL 176
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF------VNENEKWKAK 1446
ALK+ AN YG+T A G++PC E++ SI GR +E+ + K AK
Sbjct: 177 ALKVSANSVYGFTGAQV-GKLPCLEISSSISGFGREMIEETKRLLEGRFTIGNGYKGDAK 235
Query: 1447 VIYGDTD 1453
VIYGDTD
Sbjct: 236 VIYGDTD 242
>gi|313208679|emb|CBH41125.1| DNA polymerase delta, partial [Echinococcus oligarthrus]
Length = 350
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 132/251 (52%), Gaps = 18/251 (7%)
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
+ + E+ARV G+ +L RG Q +V S LLR A L + Q Q
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPGQGDEYVGG 102
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHV 1328
V+EP GFY +P+ LDF SLYPS+M+A+NLC+ T L S G+ S + ++
Sbjct: 103 SVIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLRPEDISASG--GIGSLLANYNL 160
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
D+ + P G +V +RKG+LP +LE++L R+ K+ + A + Q R+ +
Sbjct: 161 ---GPDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLKARMKAKREMA--AETDQFRRRVLD 215
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA-----ISFVNEN-EK 1442
RQLALK+ AN YG+T A G++PC E++ SI GR +E F N K
Sbjct: 216 GRQLALKVSANSVYGFTGAQV-GKLPCLEISSSISGFGREMIEGTKRLLEKKFTTRNGYK 274
Query: 1443 WKAKVIYGDTD 1453
AKVIYGDTD
Sbjct: 275 SDAKVIYGDTD 285
>gi|156144452|gb|ABU52897.1| DNA polymerase [Pan troglodytes rhadinovirus 2]
gi|157061821|gb|ABV03810.1| DNA polymerase [Pan troglodytes rhadinovirus 2]
Length = 753
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 207/466 (44%), Gaps = 74/466 (15%)
Query: 991 DSDHAVEIYVLLYCK---SESHQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCSF 1041
D D ++I + Y S + + +L + C+ V E +F F +L F
Sbjct: 317 DEDAVIQISCVFYTADGHSPAPRNTLFSVGTCEPIEDTDVLEFPSEYDMFLSFFSMLRDF 376
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLA 1101
D DI+ G++I + +L RA + L D ++ S ++ G ++
Sbjct: 377 DVDIITGYNISNFDIPYLITRATQVYNLQLKDYTKIKTGSMFEVHAPKVGGGGFMRSV-- 434
Query: 1102 EPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
S + + G I ++++++ R ++ L+ Y + VA+ +
Sbjct: 435 ------------------------SKIKISGIIAIDMYQVCREKLSLSDYKLNTVAQQCM 470
Query: 1162 RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
K + ++ + + SG R R Y V + L ++++ + SE+A++ I
Sbjct: 471 GSKKEDVSYKDIPPLYRSG-ATGRSRVGRYCVMDSVLVMDLLKMFMIHIEISEIAKLAKI 529
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNYL-----AISPGNHQVASQPAMECLPLVMEPESG 1276
VL+ G Q RV S LL A +NY+ +PG +Q A+ V+ P G
Sbjct: 530 PVRRVLTDGQQIRVLSCLLEAASQENYILPVSSTTAPGGYQGAT---------VINPMPG 580
Query: 1277 FYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDE- 1335
FY DPV+V+DF SLYPS++ A+NLC+ T + DLH+ L +
Sbjct: 581 FYDDPVLVVDFASLYPSIIQAHNLCYSTLIHD---------------HDLHLYHTLTEHD 625
Query: 1336 ---LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ-ILHRIFNARQ 1391
++ V +V R+ +L +LL LS R KQ K LA L I + +Q
Sbjct: 626 YETFVLSGGTVHFVKKHKRESLLAKLLTAWLSKR---KQIRKTLAECNDPTLKTILDKQQ 682
Query: 1392 LALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
LA+K+ N YG+T +G +PC +A+++ GR+ LE++ ++V
Sbjct: 683 LAIKVTCNAVYGFTGVA-NGLLPCINIAETVTLQGRTMLEQSKAYV 727
>gi|151368510|gb|ABH05845.2| DNA polymerase, partial [Nyctalus noctula rhadinovirus 2]
Length = 765
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 198/437 (45%), Gaps = 48/437 (10%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
IPD +V E+ +F F +L F+ + + G++I +L +RA + L + +
Sbjct: 362 IPDTQVLEFPSELDMFFAFFSMLRDFNIEFVTGYNIANFDFPYLIDRATKVYNFCLKEYA 421
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R + S G + S + + G +
Sbjct: 422 RVKTGAVFEVHKPRDSGAGFMRAV--------------------------SKIKITGLVA 455
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++++ + R ++ L+ Y + VA+ + K + ++ + F +GPG R + Y V
Sbjct: 456 IDMYIVCRDKLSLSDYKLNTVAQHCMNSKKEDVTYKEIPGLFRAGPG-GRSKLGAYCVQD 514
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
A L + ++ Q SE+A++ I VL G Q RV S LL A +NY+ P
Sbjct: 515 AALVMALLRQFVTHVEISEIAKLANIPVRRVLYDGQQIRVFSCLLAAARAENYILPVPDA 574
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL-GKILPSKE 1314
A V+ P GFY +PV+V+DF SLYPS++ A+NLC+CT + LP
Sbjct: 575 RPEAGYQGAT----VISPIPGFYDNPVLVVDFASLYPSIIQAHNLCYCTLVPHDRLPQLA 630
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
N+L + + LI V +V + +L RLL L+ R ++ +
Sbjct: 631 NSLMPGDY-----------ETFLISSGPVHFVKRHKCESLLARLLTTWLARRKAIRAELM 679
Query: 1375 KLA-PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
+ P++++ I + +QLA+K+ N YG+T +G +PC ++A+++ GR+ LE++
Sbjct: 680 RCEDPARKV---ILDKQQLAIKVTCNSVYGFTGVA-AGLLPCLKIAETVTLQGRTMLEES 735
Query: 1434 ISFVNENEKWKAKVIYG 1450
++V + + IYG
Sbjct: 736 KAYVEALGPAQVREIYG 752
>gi|313208712|emb|CBH41135.1| DNA polymerase delta, partial [Taenia asiatica]
Length = 307
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 133/255 (52%), Gaps = 20/255 (7%)
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
L ++ E+ARV G+ +L RG Q +V S LLR A L P Q Q
Sbjct: 1 LMLVANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLL--PTQRQ--GQGDEY 56
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPD 1325
V+EP+ GFY +P+ LDF SLYPS+M+A+NLC+ T L K + S
Sbjct: 57 VGGTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL------KPEDISASGGISG 110
Query: 1326 LHVLRDLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILH 1384
L +L D+ + P G +V +RKG+LP +LE++L R K+ + +A +
Sbjct: 111 LLANYNLGPDDYIRTPGGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM--VAETDHFRR 168
Query: 1385 RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI-----SFVNE 1439
R+ + RQLALK+ AN YG+T A G++PC E++ S GR +E+ F E
Sbjct: 169 RVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISSSTSGFGRDMIEETKRLLEGRFTIE 227
Query: 1440 N-EKWKAKVIYGDTD 1453
N K AKVIYGDTD
Sbjct: 228 NGYKGDAKVIYGDTD 242
>gi|293323345|emb|CBJ17982.1| DNA polymerase delta [Echinococcus oligarthrus]
Length = 350
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 133/252 (52%), Gaps = 20/252 (7%)
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
+ + E+ARV G+ +L RG Q +V S LLR A L + Q Q
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPGQGDEYVGG 102
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHV 1328
V+EP GFY +P+ LDF SLYPS+M+A+NLC+ T L S G+ S + ++
Sbjct: 103 SVIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLRPEDISASG--GIGSLLANYNL 160
Query: 1329 LRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
D+ + P G +V +RKG+LP +LE++L R+ K+ + A + Q R+ +
Sbjct: 161 ---GPDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARMKAKREMA--AETDQFRRRVLD 215
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST-------LEKAISFVNENE 1441
RQLALK+ AN YG+T A G++PC E++ SI GR LEK + N
Sbjct: 216 GRQLALKVSANSVYGFTGAQV-GKLPCLEISSSISGFGREMIGETKRLLEKKFTTRN-GY 273
Query: 1442 KWKAKVIYGDTD 1453
K AKVIYGDTD
Sbjct: 274 KSDAKVIYGDTD 285
>gi|355712611|gb|AES04406.1| polymerase , delta 1, catalytic subunit 125kDa [Mustela putorius
furo]
Length = 585
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 136/262 (51%), Gaps = 36/262 (13%)
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL---AISPGNHQV 1258
++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L + G
Sbjct: 1 LLERLMVLVNAMEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGEDY 60
Query: 1259 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLG 1318
V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P LG
Sbjct: 61 TGAT-------VIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR---PGAAQRLG 110
Query: 1319 VSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP 1378
++ +D+ + P G +V VRKG+LP++LE +LS R K+A +LA
Sbjct: 111 LT------------EDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR---KRAKAELAK 155
Query: 1379 SQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
L R + + RQLALK+ AN YG+T A G++PC E++ S+ GR +EK V
Sbjct: 156 ETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIEKTKQLV 214
Query: 1438 NENEKWK------AKVIYGDTD 1453
+ AKV+YGDTD
Sbjct: 215 ESKYTVENGYGANAKVVYGDTD 236
>gi|402588589|gb|EJW82522.1| DNA polymerase [Wuchereria bancrofti]
Length = 638
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 167/335 (49%), Gaps = 34/335 (10%)
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+V +++ + KL Y++ +V+ L + + + ++ +G R R Y
Sbjct: 16 RLVNRKSQVVLRDYKLRSYSLNSVSYHFLCEQKEDVDYSMIAD-LQNGNAFTRRRLAIYC 74
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L L+++ +L I E+ARV G+ +LSRG Q +V S +LR A + ++
Sbjct: 75 MKDAYLPLKLLQKLMSIINYIEMARVTGVPLDYLLSRGQQVKVMSQILRKAKSLHFFL-- 132
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
P V + E V++P GFY P+ LDF SLYPS+MIA+NLC+ T + +
Sbjct: 133 PVIDIVQADDTYEG-ATVIDPIRGFYNTPIATLDFASLYPSIMIAHNLCYTTLIRG--SN 189
Query: 1313 KENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
+ L S F + P+ +V +R+G+LP++LE++L+ R KQA
Sbjct: 190 ATHNLSDSDFE--------------VTPSNNRFVKSNIRRGLLPQVLEDLLNAR---KQA 232
Query: 1373 IKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
L + R + N RQLALK+ AN YG+T A G++PC E++ S+ GR ++
Sbjct: 233 KNDLKNEKDPFRRMVLNGRQLALKISANSVYGFTGASV-GKLPCLEISQSVTAYGRQMID 291
Query: 1432 KAISFVNENEK---------WKAKVIYGDTDRYTV 1457
S V E K A+VIYGDTD V
Sbjct: 292 LTKSAVEEIYKEGYLDGKCPCNAQVIYGDTDSVMV 326
>gi|313208709|emb|CBH41134.1| DNA polymerase delta, partial [Taenia saginata]
Length = 307
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 133/255 (52%), Gaps = 20/255 (7%)
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
L ++ E+ARV G+ +L RG Q +V S LLR A L + Q Q
Sbjct: 1 LMLVANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRPGQGDEY 56
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPD 1325
V+EP+ GFY +P+ LDF SLYPS+M+A+NLC+ T L K + S
Sbjct: 57 VGGTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL------KPEDISASGGISG 110
Query: 1326 LHVLRDLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILH 1384
L +L D+ + P G +V +RKG+LP +LE++L R K+ + +A +
Sbjct: 111 LLANYNLGPDDYIRTPGGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM--VAETDHFRR 168
Query: 1385 RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI-----SFVNE 1439
R+ + RQLALK+ AN YG+T A G++PC E++ S GR +E+ F E
Sbjct: 169 RVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISSSTSGFGRDMIEETKRLLEGRFTIE 227
Query: 1440 N-EKWKAKVIYGDTD 1453
N K AKVIYGDTD
Sbjct: 228 NGYKGDAKVIYGDTD 242
>gi|392858784|gb|AFM85234.1| DNA polymerase [Myotis ricketti herpesvirus 1]
Length = 998
Score = 140 bits (354), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 219/490 (44%), Gaps = 74/490 (15%)
Query: 990 NDSDHAVEIYVLLYCKSESHQRSLV-------GIPDCKVFVCSKEIHLFSHFIKILCSFD 1042
+D D ++I +L+ E+ R+++ IPD +++ E+ +F F ++ +
Sbjct: 301 HDQDLVIQISCILWTVGENTCRNILLSLGTCDPIPDTEIYEFPSELDMFYAFFSMIRDIN 360
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
+ + G++I + +L +RA H+ L++ ++ S S +G ++
Sbjct: 361 IEFITGYNIANFDIPYLIDRATHIYNFNLSEYTKVKSGSMFEVHKPFNSSQGFMRSV--- 417
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
+ + + G + L+++ + + ++ L+ Y ++ VA+ +
Sbjct: 418 -----------------------TKVKISGIVALDMYIVCKDKLSLSNYKLDTVAQQCVG 454
Query: 1163 RKIPSIPFRVLTKWFASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
K + ++ + F SGP GRA+ Y V + L ++++ SE+A++ I
Sbjct: 455 AKKEDVSYKDIPVLFRSGPEGRAKLGL--YCVKDSILVMDLLKFFVTHIEISEIAKIAMI 512
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNY-LAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
VL+ G Q RV + LL + +NY L +S + Q A V+ P GFY
Sbjct: 513 PVRRVLTDGQQIRVFTCLLAASKKENYILPVSSSTNTDGYQGAT-----VINPHPGFYNT 567
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
PV+V+DF SLYPS++ A+NLC+ T + K N L S + + I
Sbjct: 568 PVLVVDFASLYPSIIQAHNLCYSTLIPNESLYKHNHLKSSDY-----------ETFHISS 616
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
V +V +L +LL L R +K + K ++ I + +QLA+K+ N
Sbjct: 617 GPVHFVKKHKSVSLLSKLLTTWLEKRKYIKNELIKC--HDPLMKTILDKQQLAIKVTCNA 674
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV-----------------NENEKW 1443
YG+T SG +PC ++A+++ GR LEK+ F+ NE E
Sbjct: 675 VYGFTGVT-SGLLPCVKIAETVTLQGRIMLEKSKLFIENITPQQLHELEPKNFHNEREA- 732
Query: 1444 KAKVIYGDTD 1453
KVIYGDTD
Sbjct: 733 HLKVIYGDTD 742
>gi|429962842|gb|ELA42386.1| hypothetical protein VICG_00485 [Vittaforma corneae ATCC 50505]
Length = 419
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 193/422 (45%), Gaps = 63/422 (14%)
Query: 1002 LYCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAE 1061
++C E+ IP+ V+ E L + + + +PDI++G++I+ ++ +
Sbjct: 54 IFCLKET-----ASIPNSNVYWFETEEELLNAWREYFLETNPDIVIGYNIKSFDFSYILD 108
Query: 1062 RAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWG 1121
RA L L D R K+ S + R + M +G
Sbjct: 109 RAEILR---LKDFGRLGRTDKV----SRVVNRQQSSKM--------------------FG 141
Query: 1122 RTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
A +++ GR++ ++ ++R + KL Y++ +V+ L + +P + +G
Sbjct: 142 TFDAKDINIEGRLIFDLLHVIRRDHKLRSYSLNSVSVHFLGDQKEDVPPSSMFD-LQNGN 200
Query: 1182 GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARV--FGIDFFSVLSRGSQYRVESML 1239
R R Y + L ++I ++L+++ SEL+R IDFFS +RG+ +V + +
Sbjct: 201 KETRARIASYCLHDTYLPMQIFDKLNVLINYSELSRATYVPIDFFS--TRGTSIKVLTQI 258
Query: 1240 LRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYN 1299
R + YL + +V + VM+P GFY+DP+ VLDF SLYPS+MI+ N
Sbjct: 259 YRESSKHGYLI---PDVEVTDEYVPYEGGFVMDPIRGFYSDPITVLDFTSLYPSIMISKN 315
Query: 1300 LCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLL 1359
LC+ T L +KE V + P + ++G+LP++L
Sbjct: 316 LCYTTLL-----TKEQYDKVGGIK---------------TPTNNYFCSASTKEGILPQVL 355
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
+L R K K A + I+ R +ARQ ALK+ AN YG+T A G++PC E++
Sbjct: 356 RNLLKARKEAKALFK--ASTDPIIKRSLDARQYALKICANSLYGFTGATV-GQLPCIEIS 412
Query: 1420 DS 1421
S
Sbjct: 413 QS 414
>gi|9631199|ref|NP_047983.1| DNA polymerase [Ateline herpesvirus 3]
gi|4019235|gb|AAC95533.1| DNA polymerase [Ateline herpesvirus 3]
Length = 1009
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 217/462 (46%), Gaps = 75/462 (16%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
+ D +V+ E + F IL F+ +I+ G++I L +L +RA + L+D
Sbjct: 334 AVEDSEVYEFPSEADMLHGFFTILRDFNVEIITGYNISNFDLPYLIDRATQIYNIKLSDY 393
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
SR + +G + + + KD + + + R+ S + + G I
Sbjct: 394 SR------VKSGS-----------------IFQVHMPKD--MGNGFMRS-VSKIKISGII 427
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP-GRARYRCVEYVV 1193
++++ + + ++ L+ Y ++ VA+ + K + ++ + F SGP GRA+ Y V
Sbjct: 428 AIDMYIVCKDKLSLSNYKLDTVADHCIGAKKEDVSYKDILPLFMSGPEGRAKIG--RYCV 485
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY-LAIS 1252
+ L L+++ SE+A++ I VL+ G Q RV S LL A +NY L +S
Sbjct: 486 IDSVLVLKLLMFFKTHVEISEIAKLAKIPTRRVLTDGQQIRVFSCLLAAARAENYILPVS 545
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
+ Q A V+ P GFY + V+V+DF SLYPS++ A+NLC+ T ++P
Sbjct: 546 NNVNTDGFQGAT-----VITPIPGFYNNAVLVVDFASLYPSIIQAHNLCYST----LIPH 596
Query: 1313 KENTLGVSSFRPDLHVLRDLK----DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
LH LK + ++ + +V ++ +L +LL LS R
Sbjct: 597 NS-----------LHNYPYLKSSDYETFMLSSGPIHFVKKHIQTSLLSKLLTVWLSKRKA 645
Query: 1369 VKQAIKKLAPSQ-QILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
++Q KLA + Q I + +QLA+K+ N YG+T SG +PC +A+++ GR
Sbjct: 646 IRQ---KLAQCEDQDTKTILDKQQLAIKVTCNAVYGFTGVA-SGLLPCISIAETVTLQGR 701
Query: 1428 STLEKAISFV----------------NENEKWKAKVIYGDTD 1453
+ LEK+ +F+ N + K +VIYGDTD
Sbjct: 702 TMLEKSKAFIEEMTPVRLQEIVPHKLNHEHEAKFRVIYGDTD 743
>gi|340343162|emb|CCA95018.1| DNA polymerase delta, partial [Taenia parva]
Length = 307
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 131/250 (52%), Gaps = 26/250 (10%)
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS----PGNHQVASQPAMECLPL 1269
E+ARV G+ +L RG Q +V S LLR A L + G+ V
Sbjct: 9 EMARVTGVPISYLLKRGQQVKVISQLLRKAKENGLLLPTHRPGQGDEYVGGT-------- 60
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVL 1329
V+EP+ GFY +P+ LDF SLYPS+M+A+NLC+ T L S G++ F L +
Sbjct: 61 VIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLKPEDISASG--GIARF---LTIY 115
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
D+ + P G +V VRKG+LP +LE++L R K+ + +A + ++ +
Sbjct: 116 NLGPDDYIRTPTGAYFVKKHVRKGLLPCVLEQLLEARTKAKREM--VAETDHFKRQVLDG 173
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF------VNENEKW 1443
RQLALK+ AN YG+T A G++PC EL+ SI GR +E+ + K
Sbjct: 174 RQLALKVSANSVYGFTGAQV-GKLPCLELSSSISGFGREMIEETKRLLEGKFTIGNGYKS 232
Query: 1444 KAKVIYGDTD 1453
AKVIYGDTD
Sbjct: 233 DAKVIYGDTD 242
>gi|402581220|gb|EJW75168.1| hypothetical protein WUBG_13924, partial [Wuchereria bancrofti]
Length = 150
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 79/105 (75%), Gaps = 4/105 (3%)
Query: 1207 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA--ISPGNHQVASQPAM 1264
D RTSE+AR++GI F VL+RGSQ+RVESMLLRLA + Y+A ISP Q P
Sbjct: 25 DFFTRTSEMARLYGIQFNEVLTRGSQFRVESMLLRLARREKYVAPSISPAQRQAMCSP-- 82
Query: 1265 ECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
E LPL MEPESGFY DPV+VLDFQSLYPS++IAYN CF TC GK+
Sbjct: 83 ETLPLTMEPESGFYRDPVIVLDFQSLYPSIIIAYNYCFTTCFGKV 127
>gi|380805135|gb|AFE74443.1| DNA polymerase delta catalytic subunit, partial [Macaca mulatta]
Length = 415
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 199/448 (44%), Gaps = 70/448 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDS-INVVALAFENDSDHAVEIYVLLYCKSESHQRSLVG 1015
L +LS +++ R + P+P D I + +L + + R
Sbjct: 29 LRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEP-------FLRLALTLRPCAP 81
Query: 1016 IPDCKVFVCSKE---IHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I KV KE + +S FI+I+ DPD++ G++IQ L +L RA L +
Sbjct: 82 ILGAKVQSYEKEEDLLQAWSTFIRIM---DPDVITGYNIQNFDLPYLISRAQTLKVQTF- 137
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
P ++A S I + + GR + + G
Sbjct: 138 -----PFLGRVAGLRSNIRDSSFQSK--------------------QTGRRDTKVVSMVG 172
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ +++ +++ E KL YT+ AV+ L + + ++T +G + R R Y
Sbjct: 173 RVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITD-LQNGNDQTRRRLAVYC 231
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--- 1249
+ A L L ++ +L ++ E+ARV G+ +LSRG Q +V S LLR A + L
Sbjct: 232 LKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMPV 291
Query: 1250 AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
S G V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L
Sbjct: 292 VRSEGGEDYTGAT-------VIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR-- 342
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
P LG++ +D+ + P G +V VRKG+LP++LE +LS R
Sbjct: 343 -PGAAQKLGLT------------EDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR--- 386
Query: 1370 KQAIKKLAPSQQILHR-IFNARQLALKL 1396
K+A +LA L R + + RQLALK+
Sbjct: 387 KRAKAELAKETDPLRRQVLDGRQLALKV 414
>gi|53759071|gb|AAC26681.2| DNA polymerase catalytic subunit [Hawaiian green turtle herpesvirus]
Length = 1091
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 131/530 (24%), Positives = 216/530 (40%), Gaps = 114/530 (21%)
Query: 989 ENDSDHAVEIYVLLYCKSESHQ--RSLVGIPDCK----------VFVCSKEIHLFSHFIK 1036
+N D ++I +++C ++ R L + C+ V C E L F
Sbjct: 335 DNSCDVVIQISAIVHCLKTGNEEGRLLFSLGSCRLPAETAGSATVIECDSEYELLLAFFT 394
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGIT 1096
F P+ L G++I G L FL +AA + L + R ERG
Sbjct: 395 FFKQFSPEYLSGYNILGFDLPFLVNKAAAYDLKL-DGYGRL--------------ERGGQ 439
Query: 1097 DNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAV 1156
++ ++E+ K+ + + G + L+V+ L+RG++ L Y ++ V
Sbjct: 440 FRIID---LSENRFQKNIKV------------RINGTVTLDVYPLLRGKLSLPNYKLDTV 484
Query: 1157 AETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELA 1216
VL + ++ + + GP R +Y + + L L + + SE+A
Sbjct: 485 CREVLGETKRDVSYKEIPALYGQGP-EGRGLLGDYCLQDSALVLRLFEKFAPHVEMSEVA 543
Query: 1217 RVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP--GNHQVASQPAMECL------- 1267
++ + V++ G Q RV + LL+ A Y+ G + P +
Sbjct: 544 KLAHLPMNRVMTDGQQIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDLSPSLNGPEEG 603
Query: 1268 --------------------PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
V+EPE+GFY DPV V DF SLYPS++ A+NLCF T
Sbjct: 604 TEEENETENGAYTGDKGYQGATVLEPETGFYVDPVTVFDFASLYPSIIQAHNLCFTTLTR 663
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
+ KE G + +E + + YV P VR+ +L LL + L+ R
Sbjct: 664 RAETLKELKAG------------EDYEEFKVQGMSLFYVKPHVRRSLLGELLTDWLALRK 711
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
++ ++K APS Q L + + +QLA+KL N YG+T +G +PC E+A ++ GR
Sbjct: 712 KIRASMKT-APSDQRL--LLDKQQLAIKLTCNSVYGFTGVA-TGFLPCLEVAATVTTVGR 767
Query: 1428 STLEKAISFVNENEKWKA------------------------KVIYGDTD 1453
L F+ + +W +VIYGDTD
Sbjct: 768 DMLLATRDFI--HTRWGTDFEALLVDAPELAAFRRPESLFGLRVIYGDTD 815
>gi|30348512|emb|CAC84304.1| polmerase [Saimiriine herpesvirus 2]
Length = 1009
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 210/462 (45%), Gaps = 75/462 (16%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
+ + +V+ EI + F ++ F+ +I+ G++I L +L +RA + L+D
Sbjct: 334 AVENTEVYEFPSEIDMLHGFFSLIRDFNVEIITGYNISNFDLPYLIDRATQIYNIKLSDY 393
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
SR S + + +G ++ S + + G I
Sbjct: 394 SRVKTGSIFQVHTPKDTGKGFMRSV--------------------------SKIKISGII 427
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP-GRARYRCVEYVV 1193
++++ + + ++ L+ Y ++ VA + K + ++ + F SGP GRA+ Y V
Sbjct: 428 AIDMYIVCKDKLSLSNYKLDTVANHCISAKKEDVSYKDIMPLFMSGPEGRAKIGL--YCV 485
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY-LAIS 1252
+ L ++++ + SE+A++ I VL+ G Q RV S LL A +NY L +S
Sbjct: 486 IDSVLVMKLLKFFMIHVEISEIAKLAKIPTRRVLTDGQQIRVFSCLLAAARAENYILPVS 545
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
+ Q A V+ P GFY + V+V+DF SLYPS++ A+NLC+ T ++P
Sbjct: 546 NDVNADGFQGAT-----VINPIPGFYNNAVLVVDFASLYPSIIQAHNLCYST----LIPH 596
Query: 1313 KENTLGVSSFRPDLHVLRDLK----DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
LH LK + ++ + +V ++ +L RLL LS R
Sbjct: 597 HA-----------LHNYPHLKSSDYETFMLSSGPIHFVKKHIQTSLLSRLLTVWLSKRKA 645
Query: 1369 VKQAIKKLAPSQQI-LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
++Q KLA + + I + +QLA+K+ N YG+T SG +PC +A+++ GR
Sbjct: 646 IRQ---KLAECEDLDTKTILDKQQLAIKVTCNAVYGFTGVA-SGLLPCISIAETVTLQGR 701
Query: 1428 STLEKAISF----------------VNENEKWKAKVIYGDTD 1453
+ LEK+ F VN K +VIYGDTD
Sbjct: 702 TMLEKSKIFIEAMTPDTLQEIVPHKVNHEPDAKFRVIYGDTD 743
>gi|313208726|emb|CBH41139.1| DNA polymerase delta, partial [Taenia multiceps]
Length = 307
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 130/247 (52%), Gaps = 20/247 (8%)
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E+ARV G+ +L RG Q +V S LLR A L + Q Q V+EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRPGQGDEYVGGTVIEP 64
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK 1333
+ GFY +P+ LDF SLYPS+M+A+NLC+ T L K + S L +L
Sbjct: 65 QRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL------KPEDISASGGISGLLANYNLG 118
Query: 1334 -DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
D+ + P G +V +RKG+LP +LE++L R K+ + +A + R+ + RQL
Sbjct: 119 PDDYIKTPAGAYFVKKHIRKGLLPCVLEQLLEARTRAKREM--VAETDHFRRRVLDGRQL 176
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI-----SFVNEN-EKWKAK 1446
ALK+ AN YG+T A G++PC E++ S GR +E+ F EN K AK
Sbjct: 177 ALKVSANSVYGFTGAQV-GKLPCLEISSSASGFGRKMIEETKLLLEGRFTIENGYKGDAK 235
Query: 1447 VIYGDTD 1453
VIYGDTD
Sbjct: 236 VIYGDTD 242
>gi|51518080|ref|YP_068007.1| BALF5 [Macacine herpesvirus 4]
gi|18025531|gb|AAK95475.1| BALF5 [Macacine herpesvirus 4]
Length = 1015
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 241/532 (45%), Gaps = 98/532 (18%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S +A E N++D ++I +L+ E ++R
Sbjct: 276 GDLSVRREDSSWPSYTALAFDIECLGEEGFPTATNEADLILQISCVLWSTGEEAGRYRRI 335
Query: 1013 LVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C+ V+ E+ + F +++ +I+ G+++ ++ +RA H+
Sbjct: 336 LLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYVLDRARHI 395
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
I+ L A G E+ R D + L + +
Sbjct: 396 -----YGINPASLGKIRAGGVCEV--RRPHD-------AGKGFLRAN------------T 429
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ + G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + FA GP R R
Sbjct: 430 KVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFAEGP-RGRR 488
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A +
Sbjct: 489 RLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKE 548
Query: 1247 NYLAISP-GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
N++ P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T
Sbjct: 549 NFILPMPSASDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST- 602
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
I P +E+ L + RP D + L G + V+K V L +L++
Sbjct: 603 --MITPEEEHRL--AGLRPG----EDYESFRLT--GGTYHF---VKKHVHESFLASLLTS 649
Query: 1366 RIMVKQAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
+ ++AIKKL P Q+ I + +QLA+K N YG+T +G PC +A+
Sbjct: 650 WLAKRKAIKKLLAACEDPRQKT---ILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAE 705
Query: 1421 SIVQCGRSTLEKAISFVNE-------------------NEKWKAKVIYGDTD 1453
++ GR+ LE+A +FV N + + +VIYGDTD
Sbjct: 706 TVTLQGRTMLERAKAFVEALSPADLQALAPTPNAWAPLNPEGRLRVIYGDTD 757
>gi|171988558|gb|AAO46905.2| DNA polymerase [Gorilla rhadinovirus 1]
Length = 752
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 213/458 (46%), Gaps = 55/458 (12%)
Query: 990 NDSDHAVEIYVLLYCKSES--HQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSF 1041
D D ++I +L+ ++ + R L+G+ C +VF E + + F+ ++ +
Sbjct: 314 QDEDVIIQISCVLHTVGDAGPYARILMGLGTCDPLPGVEVFEFPSEYDMLTAFLTMIRDY 373
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLA 1101
D D L G++I L ++ RA + L D + KI G
Sbjct: 374 DVDFLTGYNIANFDLPYIIARATQVYNFKLQDFT------KIKTGS-------------- 413
Query: 1102 EPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
V E + + R+ S + + G + ++++++ R ++ L+ Y ++ VA L
Sbjct: 414 ---VFEVHQPRGGSEGGNFMRSQ-SKVKISGIVPIDMYQVCRDKLSLSDYKLDTVANQCL 469
Query: 1162 RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
++ I ++ + F SGP R + Y V + L ++++ + SE+A++ I
Sbjct: 470 GQRKEDISYKEIPPLFKSGP-EGRAKVGNYCVIDSVLVMDLLLRFQTHVEISEIAKLAKI 528
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-GNHQVASQPAMECLPLVMEPESGFYAD 1280
VL+ G Q RV S LL A + Y+ P GN Q A V+ P GFY D
Sbjct: 529 PSRRVLTDGQQIRVFSCLLEAATAEGYILPVPNGNATSGYQGAT-----VINPLPGFYDD 583
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
PV+V+DF SLYPS++ A+NLC+ T ++P S H+ D + ++
Sbjct: 584 PVLVVDFASLYPSIIQAHNLCYST----LIPG-------DSLHLHPHLTPDDYETFILSG 632
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-PSQQILHRIFNARQLALKLIAN 1399
V +V R+ +L RLL L+ R +++ + P Q+ I + +QLA+K+ N
Sbjct: 633 GPVHFVKKHKRESLLARLLTVWLAKRREIRKTLALCTDPVQKT---ILDKQQLAIKVTCN 689
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
YG+T SG +PC +A+++ GR LE++ +FV
Sbjct: 690 AVYGFTGVA-SGILPCLNIAETVTLQGRKMLERSKAFV 726
>gi|435850447|ref|YP_007312033.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
gi|433661077|gb|AGB48503.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
Length = 903
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 212/456 (46%), Gaps = 89/456 (19%)
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAG 1086
E + F +IL +DPDIL+G++I + ++++R I L D S T + S
Sbjct: 232 EESMLKRFFEILRDYDPDILIGYNINDFDIPYISDR-----IKFLAD-SGTNINSGSGRD 285
Query: 1087 DSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEV 1146
+S R I + + + GR+V++V L+R +
Sbjct: 286 GRPMSYRKIGTMTM---------------------------ISMAGRVVVDVLPLVRSQF 318
Query: 1147 KLNMYTVEAVAETVL-RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
L YT+ VA+ +L R K+ P + W + G + ++Y ++L +E++ +
Sbjct: 319 SLKRYTLRNVAKELLDREKLDVAPSEMEDHW--NDEGEKLLKFIDYARRDSELAMELVMK 376
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN-YLAISPGNHQVASQ-PA 1263
L +++R ++RV G V+ G VE++LLR ++ + P ++ V S+
Sbjct: 377 LQLLDRYIAISRVSGSLLQEVIDGGQTSMVENLLLRECRIRDRVIPPKPDDNLVYSRNKN 436
Query: 1264 MECLP--LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSS 1321
E L V+EP+ G + VV+LD++SLYP++M+A+NLC+ T + K +P + T
Sbjct: 437 SEGLKGGEVLEPKKGLLEN-VVILDYKSLYPTIMMAHNLCYSTVVEKDIPGEGET----- 490
Query: 1322 FRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
+ PP+G +V V KG++P +LE +L+ RI K+ +K ++ +
Sbjct: 491 ---------------ITPPSGGRFVTADVSKGIMPAILENLLNRRIETKKRMKDISNEDE 535
Query: 1382 ILHRIFNARQLALKLIANVTYGYTAAGFS-GRMPCAELADSIVQCGRSTLEKAISFVNE- 1439
++ +A QLA+K++ N YGY AG++ R+ LA+++ GR + S + +
Sbjct: 536 --YKALDATQLAMKILLNSFYGY--AGYTRARLYSLTLANAVTSFGRENILTTRSLIEDT 591
Query: 1440 ----------------------NEKWKAKVIYGDTD 1453
N+ V+YGDTD
Sbjct: 592 IHTIYLKDGNSYLQSEIASDPLNKDISLSVVYGDTD 627
>gi|139424541|ref|YP_001129507.1| BALF5 [Human herpesvirus 4 type 2]
gi|123811624|sp|Q1HVC1.1|DPOL_EBVA8 RecName: Full=DNA polymerase catalytic subunit
gi|82704017|gb|ABB89286.1| BALF5 [Human herpesvirus 4]
gi|428161092|gb|AFY97899.1| BALF5 [Human herpesvirus 4]
Length = 1015
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 242/532 (45%), Gaps = 98/532 (18%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S +A E N++D ++I +L+ E ++R
Sbjct: 276 GDLSVRREDSSWPSYQALAFDIECLGEEGFPTATNEADLILQISCVLWSTGEEAGRYRRI 335
Query: 1013 LVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C+ V+ E+ + F +++ +I+ G+++ ++ +RA H+
Sbjct: 336 LLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHI 395
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
I+ L A G E+ R D + L + +
Sbjct: 396 -----YSINPASLGKIRAGGVCEV--RRPHD-------AGKGFLRAN------------T 429
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ + G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + FA+GP R
Sbjct: 430 KVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFAAGP-EGRR 488
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A +
Sbjct: 489 RLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKE 548
Query: 1247 NYLAISP-GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
N++ P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T
Sbjct: 549 NFILPMPSASDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST- 602
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
I P +E+ L + RP D + L GV + V+K V L +L++
Sbjct: 603 --MITPGEEHRL--AGLRPG----EDYESFRLT--GGVYHF---VKKHVHESFLASLLTS 649
Query: 1366 RIMVKQAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
+ ++AIKKL P Q+ I + +QLA+K N YG+T +G PC +A+
Sbjct: 650 WLAKRKAIKKLLAACEDPRQRT---ILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAE 705
Query: 1421 SIVQCGRSTLEKAISFVNE-------------------NEKWKAKVIYGDTD 1453
++ GR+ LE+A +FV N + + +VIYGDTD
Sbjct: 706 TVTLQGRTMLERAKAFVEALSPANLQALAPSPDAWAPLNPEGQLRVIYGDTD 757
>gi|428161174|gb|AFY97980.1| BALF5 [Human herpesvirus 4]
Length = 1015
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 241/532 (45%), Gaps = 98/532 (18%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S +A E N++D ++I +L+ E ++R
Sbjct: 276 GDLSVRREDSSWPSYQALAFDIECLGEEGFPTATNEADLILQISCVLWSTGEEAGRYRRI 335
Query: 1013 LVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C+ V+ E+ + F +++ +I+ G+++ ++ +RA H
Sbjct: 336 LLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARH- 394
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
I +N S KI AG G+ + L A +
Sbjct: 395 -IYSINPASL----GKIRAG-------GVCEVRRPHDAGKGFLRANTKV----------- 431
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + FA+GP R
Sbjct: 432 --RITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFAAGP-EGRR 488
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A +
Sbjct: 489 RLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKE 548
Query: 1247 NYLAISP-GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
N++ P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T
Sbjct: 549 NFILPMPSASDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST- 602
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
I P +E+ L + RP D + L GV + V+K V L +L++
Sbjct: 603 --MITPGEEHRL--AGLRPG----EDYESFRLT--GGVYHF---VKKHVHESFLASLLTS 649
Query: 1366 RIMVKQAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
+ ++AIKKL P Q+ I + +QLA+K N YG+T +G PC +A+
Sbjct: 650 WLAKRKAIKKLLAACEDPRQRT---ILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAE 705
Query: 1421 SIVQCGRSTLEKAISFVNE-------------------NEKWKAKVIYGDTD 1453
++ GR+ LE+A +FV N + + +VIYGDTD
Sbjct: 706 TVTLQGRTMLERAKAFVEALSPANLQALAPSPDAWAPLNPEGQLRVIYGDTD 757
>gi|82503268|ref|YP_401712.1| BALF5 [Human herpesvirus 4]
gi|118858|sp|P03198.1|DPOL_EBV RecName: Full=DNA polymerase catalytic subunit
gi|1334913|emb|CAA24805.1| unnamed protein product [Human herpesvirus 4]
gi|23893658|emb|CAD53462.1| DNA polymerase [Human herpesvirus 4]
Length = 1015
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 242/532 (45%), Gaps = 98/532 (18%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S +A E N++D ++I +L+ E ++R
Sbjct: 276 GDLSVRREDSSWPSYQALAFDIECLGEEGFPTATNEADLILQISCVLWSTGEEAGRYRRI 335
Query: 1013 LVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C+ V+ E+ + F +++ +I+ G+++ ++ +RA H+
Sbjct: 336 LLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHI 395
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
I+ L A G E+ R D + L + +
Sbjct: 396 -----YSINPASLGKIRAGGVCEV--RRPHD-------AGKGFLRAN------------T 429
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ + G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + FA+GP R
Sbjct: 430 KVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFAAGP-EGRR 488
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A +
Sbjct: 489 RLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKE 548
Query: 1247 NYLAISP-GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
N++ P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T
Sbjct: 549 NFILPMPSASDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST- 602
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
I P +E+ L + RP D + L GV + V+K V L +L++
Sbjct: 603 --MITPGEEHRL--AGLRPG----EDYESFRLT--GGVYHF---VKKHVHESFLASLLTS 649
Query: 1366 RIMVKQAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
+ ++AIKKL P Q+ I + +QLA+K N YG+T +G PC +A+
Sbjct: 650 WLAKRKAIKKLLAACEDPRQRT---ILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAE 705
Query: 1421 SIVQCGRSTLEKAISFVNE-------------------NEKWKAKVIYGDTD 1453
++ GR+ LE+A +FV N + + +VIYGDTD
Sbjct: 706 TVTLQGRTMLERAKAFVEALSPANLQALAPSPDAWAPLNPEGQLRVIYGDTD 757
>gi|340343152|emb|CCA95013.1| DNA polymerase delta, partial [Taenia laticollis]
Length = 307
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 130/252 (51%), Gaps = 20/252 (7%)
Query: 1209 INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLP 1268
+ + E+ARV G+ +L RG Q +V S LLR A L + Q Q
Sbjct: 4 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRRAKGNGLLLPT----QRPGQGDEYVGG 59
Query: 1269 LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHV 1328
V+EP+ GFY +P+ LDF SLYPS+M+A+NLC+ T L + + S L
Sbjct: 60 TVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL------RPEDISASGGLSGLLA 113
Query: 1329 LRDLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIF 1387
+L D+ + P G +V VRKG+LP +LE++L R K + +A + R+
Sbjct: 114 NYNLGPDDYIRTPTGAYFVKKHVRKGLLPCVLEQLLEAR--TKAKCEMVAETDHFRRRVL 171
Query: 1388 NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF------VNENE 1441
+ RQLALK+ AN YG+T A G++PC E++ SI GR +E+ +
Sbjct: 172 DGRQLALKVSANSVYGFTGAQV-GKLPCLEISSSISGFGREMIEETKRLLEGKFTIRNGY 230
Query: 1442 KWKAKVIYGDTD 1453
K AKVIYGDTD
Sbjct: 231 KSDAKVIYGDTD 242
>gi|8925893|gb|AAF81662.1|AF204166_2 DNA polymerase [Retroperitoneal fibromatosis-associated herpesvirus]
Length = 1013
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 228/530 (43%), Gaps = 89/530 (16%)
Query: 967 ESRGDLRPDPRYD--SINVVALAFE------NDSDHAVEIYVLLYCKSES--HQRSLVGI 1016
E R DL PRY S ++ + E D D ++I + + E + R L+ +
Sbjct: 281 ELRPDLHTWPRYRILSFDIECMGEEGFPRATRDGDVILQISCVFHDAGEDAPYTRMLLSL 340
Query: 1017 PDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL 1070
C ++F E + + F +L +D D + G++I L ++ RA +
Sbjct: 341 GTCDPLENTEIFEFPSEYDMLTAFFTMLRDYDVDFITGYNIANFDLPYIITRATQVYNFD 400
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
L + ++ S + G + S + +
Sbjct: 401 LKNYTKIKTGSMFEVHEPAGGSGGFLRSQ--------------------------SKVKI 434
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
G + ++++++ R ++ L+ Y ++ VA+ L ++ I +R + F SG R +
Sbjct: 435 SGIVPIDMYQVCRDKLSLSDYKLDTVAKHCLSKQKDDISYRDIPPPFRSGAA-GRAKIGR 493
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y V + L ++++ +E+AR+ I VL+ G Q RV S LL A + Y+
Sbjct: 494 YCVIDSVLVMDLLRMFQTHVEIAEIARLARIPARRVLTDGQQIRVFSCLLEAASREGYIL 553
Query: 1251 ISP-----GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
P G +Q A+ V+ P GFY DPV+V+DF SLYPS+M A+NLC+ T
Sbjct: 554 PVPNGDTTGGYQGAT---------VISPIPGFYDDPVLVVDFASLYPSIMQAHNLCYST- 603
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
L + G PD + + + V +V VR+ +L +LL L+
Sbjct: 604 ----LITGSALHGHPELTPDDY------ETFHLSGGTVHFVKKHVRESLLSKLLTTWLAK 653
Query: 1366 RIMVKQAIKKLAP-SQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
R K+ K LA + + I + +QLA+K+ N YG+T SG +PC +A+++
Sbjct: 654 R---KEIRKNLASCTDPTMRTILDKQQLAIKVTCNAVYGFTGVA-SGILPCLNIAETVTL 709
Query: 1425 CGRSTLEKAISFV----------------NENEKWKAKVIYGDTDRYTVC 1458
GR LE + +FV + + + KVIYGDTD VC
Sbjct: 710 QGRKMLETSQAFVEGISPTALADLLQRPIEASPEARFKVIYGDTDSLFVC 759
>gi|123845614|sp|Q3KSP1.1|DPOL_EBVG RecName: Full=DNA polymerase catalytic subunit
gi|64173304|gb|AAY41154.1| unknown [Human herpesvirus 4]
Length = 1015
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 241/532 (45%), Gaps = 98/532 (18%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S +A E N++D ++I +L+ E ++R
Sbjct: 276 GDLSVRREDSSWPSYQALAFDIECLGEEGFPTATNEADLILQISCVLWSTGEEAGRYRRI 335
Query: 1013 LVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C+ V+ E+ + F +++ +I+ G+++ ++ +RA H
Sbjct: 336 LLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARH- 394
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
I +N S KI AG G+ + L A +
Sbjct: 395 -IYSINPASL----GKIRAG-------GVCEVRRPHDAGKGFLRANTKV----------- 431
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + FA+GP R
Sbjct: 432 --RITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFAAGP-EGRR 488
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A +
Sbjct: 489 RLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKE 548
Query: 1247 NYLAISP-GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
N++ P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T
Sbjct: 549 NFILPMPSASDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST- 602
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
I P +E+ L + RP D + L GV + V+K V L +L++
Sbjct: 603 --MITPGEEHRL--AGLRPG----EDYESFRLT--GGVYHF---VKKHVHESFLASLLTS 649
Query: 1366 RIMVKQAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
+ ++AIKKL P Q+ I + +QLA+K N YG+T +G PC +A+
Sbjct: 650 WLAKRKAIKKLLAACEDPRQRT---ILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAE 705
Query: 1421 SIVQCGRSTLEKAISFVNE-------------------NEKWKAKVIYGDTD 1453
++ GR+ LE+A +FV N + + +VIYGDTD
Sbjct: 706 TVTLQGRTMLERAKAFVEALSPANLQALAPSPDAWAPLNPEGQLRVIYGDTD 757
>gi|313208720|emb|CBH41137.1| DNA polymerase delta, partial [Taenia hydatigena]
Length = 307
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 128/254 (50%), Gaps = 18/254 (7%)
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAME 1265
L ++ E+ARV G+ +L RG Q +V S LLR A L + Q Q
Sbjct: 1 LMLVANNVEMARVTGVPIAYLLKRGQQVKVISQLLRKAKVHGLLLPT----QRPGQGDEY 56
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPD 1325
V+EP+ GFY +P+ LDF SLYPS+M+A+NLC+ T L EN
Sbjct: 57 VGGTVIEPQRGFYNEPIATLDFSSLYPSVMVAHNLCYTTFL-----KPENISASGGLSSL 111
Query: 1326 LHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR 1385
L + D+ + P G +V +RKG+LP LE++L R K+ + + + +
Sbjct: 112 LAIYNLGPDDYIRTPAGAYFVKKHIRKGLLPCALEQLLEARAKAKREM--VTETDHFRRQ 169
Query: 1386 IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF------VNE 1439
+ + RQLALK+ AN YG+T A G++PC E++ SI GR +E+ +
Sbjct: 170 VLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISSSISGFGREMIEETRRLLEGKFTIGN 228
Query: 1440 NEKWKAKVIYGDTD 1453
K AKVIYGDTD
Sbjct: 229 GYKSDAKVIYGDTD 242
>gi|312091091|ref|XP_003146857.1| hypothetical protein LOAG_11287 [Loa loa]
Length = 440
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 92/126 (73%), Gaps = 2/126 (1%)
Query: 1334 DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLA 1393
++L + P G ++ VR+G++P +LEEIL+TR+MVK+A K+ ++ L RI ARQ+A
Sbjct: 5 NKLHVSPTGAIFCQRTVRRGLMPVMLEEILNTRVMVKKAAKECKKDRR-LARILEARQMA 63
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
LKLIANVTYGY AA FSGRMPC E+AD+IV GR TLE+A+ VNE ++VIYGDTD
Sbjct: 64 LKLIANVTYGYAAANFSGRMPCVEVADAIVGKGRETLERAMRLVNEGSYGSSRVIYGDTD 123
Query: 1454 R-YTVC 1458
+ VC
Sbjct: 124 SMFVVC 129
>gi|386368289|gb|AFJ06900.1| BALF5 [Human herpesvirus 4]
Length = 1015
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 140/533 (26%), Positives = 240/533 (45%), Gaps = 100/533 (18%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S +A E N++D ++I +L+ E ++R
Sbjct: 276 GDLSVRREDSSWPSYQALAFDIECLGEEGFPTATNEADLILQISCVLWSTGEEAGRYRRI 335
Query: 1013 LVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C+ V+ E+ + F +++ +I+ G+++ ++ +RA H+
Sbjct: 336 LLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHI 395
Query: 1067 GIGLLNDISRTPLE-SKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
S P KI AG G+ + L A +
Sbjct: 396 -------YSIXPASLGKIRAG-------GVCEVRRPHDAGKGFLRANTKV---------- 431
Query: 1126 SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
+ G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + FA+GP R
Sbjct: 432 ---RITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFAAGP-EGR 487
Query: 1186 YRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHT 1245
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A
Sbjct: 488 RRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQK 547
Query: 1246 QNYLAISP-GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCT 1304
+N++ P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T
Sbjct: 548 ENFILPMPSASDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
Query: 1305 CLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILS 1364
I P +E+ L + RP D + L GV + V+K V L +L+
Sbjct: 603 ---MITPGEEHRL--AGLRPG----EDYESFRLT--GGVYHF---VKKHVHESFLASLLT 648
Query: 1365 TRIMVKQAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
+ + ++AIKKL P Q+ I + +QLA+K N YG+T +G PC +A
Sbjct: 649 SWLAKRKAIKKLLAACEDPRQRT---ILDKQQLAIKCTCNAVYGFTGVA-NGLXPCLSIA 704
Query: 1420 DSIVQCGRSTLEKAISFVNE-------------------NEKWKAKVIYGDTD 1453
+++ GR+ LE+A +FV N + + +VIYGDTD
Sbjct: 705 ETVTLQGRTMLERAKAFVEALSPANLQALAPSPDAWAPLNPEGQLRVIYGDTD 757
>gi|340343164|emb|CCA95019.1| DNA polymerase delta, partial [Taenia taeniaeformis]
Length = 292
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 131/251 (52%), Gaps = 28/251 (11%)
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS----PGNHQVASQPAMECLPL 1269
E+ARV G+ +L RG Q +V S LLR + L + G+ V
Sbjct: 1 EMARVTGVPMAYLLKRGQQVKVISQLLRKSKENGLLLPTHRSGQGDEYVGGT-------- 52
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVL 1329
V+EP+ GFY +P+ LDF SLYPS+M+A+NLC+ T L K + S L
Sbjct: 53 VIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL------KPEDISASGGIVHLLAT 106
Query: 1330 RDLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
+L D+ + P G +V +RKG+LP +LE++L R K+ + +A + ++ +
Sbjct: 107 YNLGPDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM--VAENDNFRRQVLD 164
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE------NEK 1442
RQLALK+ AN YG+T A G++PC EL+ SI GR +E+ + E K
Sbjct: 165 GRQLALKVSANSVYGFTGAQV-GKLPCLELSSSISGFGREMIEETKRLLEEEFTIKNGYK 223
Query: 1443 WKAKVIYGDTD 1453
AKVIYGDTD
Sbjct: 224 SDAKVIYGDTD 234
>gi|156254730|gb|AAN35124.2| DNA polymerase [Pan troglodytes rhadinovirus 1]
Length = 752
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 213/458 (46%), Gaps = 55/458 (12%)
Query: 990 NDSDHAVEIYVLLYCKSES--HQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSF 1041
D D ++I +L+ E + R L+G+ C +VF E + + F+ +L +
Sbjct: 314 QDEDVIIQISCVLHTVGEDGPYTRILLGLGTCDPLPGVEVFEFPSEYDMLAAFLTMLRDY 373
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLA 1101
+ D + G++I L ++ RA + L D + KI G
Sbjct: 374 NVDFITGYNIANFDLPYIIARATQVYNFKLQDFT------KIRTGS-------------- 413
Query: 1102 EPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
V E + + R+ S + + G + ++++++ R ++ L+ Y ++ VA+ L
Sbjct: 414 ---VFEVHQPRGGSEGGNFMRSQ-SKVKISGIVPIDMYQVCRDKLSLSDYKLDTVAKQCL 469
Query: 1162 RRKIPSIPFRVLTKWFASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
++ + ++ + F SGP GRA+ Y V + L ++++ Q SE+A++
Sbjct: 470 GQQKEDVSYKDIPPLFKSGPEGRAKVG--NYCVIDSILVMDLLRQFQTHVEISEIAKLAK 527
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNY-LAISPGNHQVASQPAMECLPLVMEPESGFYA 1279
I VL+ G Q RV S LL A + Y L I G+ Q A V+ P GFY
Sbjct: 528 IPARRVLTDGQQIRVFSCLLEAATREGYILPIPKGDAISGYQGAT-----VISPLPGFYD 582
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIP 1339
DPV+V+DF SLYPS++ A+NLC+ T ++P S H+ D + +
Sbjct: 583 DPVLVVDFASLYPSIIQAHNLCYST----LIPG-------DSLHLHPHLSPDDYETFTLS 631
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIAN 1399
V +V R+ +L RLL L+ R +++ + + L I + +QLA+K+ N
Sbjct: 632 GGPVHFVKKHKRESLLARLLTVWLAKRKEIRKTLASC--TDPTLKTILDKQQLAIKVTCN 689
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
YG+T SG +PC +A+++ GR LE++ +FV
Sbjct: 690 AVYGFTGVA-SGILPCLNIAETVTLQGRKMLERSQAFV 726
>gi|392858787|gb|AFM85236.1| DNA polymerase [Myotis ricketti herpesvirus 2]
Length = 1008
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 207/459 (45%), Gaps = 71/459 (15%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
+ D +V+ C E+ + F ++ FD + + G++I ++ +RA + L + +
Sbjct: 343 VEDTEVYECPSELDMLYLFFTLIRDFDVEFVTGYNISNFDFPYIIDRATQVYNFNLKEFT 402
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R S + S G M A S + + G +
Sbjct: 403 RVKSSSMFEVHKPKNSTAGF---MRA-----------------------VSKVKISGLVP 436
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++++++ + ++ L+ Y + VA+ + + + +R + F GPG R + Y V
Sbjct: 437 IDMYQVCKDKLSLSNYKLNTVAKECVGEQKEDVSYRDIPHLFRDGPG-GRSKLGLYCVKD 495
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
+ L L+++ SE+A++ I VL+ G Q RV S LL +A +NY I P N
Sbjct: 496 SVLVLDLLKYFMTHIEISEIAKIAKIPTRRVLTDGQQIRVFSCLLEVARRENY--ILPVN 553
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
H S V+ P GFY PV+V+DF SLYP+++ +NLC+ T I+P +
Sbjct: 554 HNSESDTYQG--ATVINPIPGFYNTPVLVVDFASLYPTIIQGHNLCYST----IIPDGQ- 606
Query: 1316 TLGVSSFRPDLHVLRDLKD---ELLIPPNGVMYVPPKVRK-GVLPRLLEEILSTRIMVKQ 1371
LH+ DLK E +GV++ K + +L LL L+ R +++
Sbjct: 607 ----------LHLHSDLKPGDYETFELSSGVVHFVKKHKAVSLLATLLNVWLAKRKSIRK 656
Query: 1372 AIKKLA-PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+ ++ PS + I + +QLA+K+ N YG+T SG +PC ++A+++ GR L
Sbjct: 657 TLATVSDPSTRT---ILDKQQLAIKVTCNAVYGFTGVA-SGILPCLKIAETVTFQGRRML 712
Query: 1431 EKAISF----------------VNENEKWKAKVIYGDTD 1453
EK+ + VN + +VIYGDTD
Sbjct: 713 EKSKEYIESLTPDMLSHIIQGPVNHSPGASFRVIYGDTD 751
>gi|52493135|gb|AAU81565.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
Length = 673
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 132/536 (24%), Positives = 216/536 (40%), Gaps = 115/536 (21%)
Query: 989 ENDSDHAVEIYVLLYCKSESHQ--RSLVGIPDCK----------VFVCSKEIHLFSHFIK 1036
+N D ++I +++C ++ R L + C+ V C E L F
Sbjct: 8 DNSCDVVIQISAIVHCLKTGNEEGRLLFSLGSCRLPAETAGSATVIECDSEYELLLAFFT 67
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGIT 1096
F P+ L G++I G L FL +AA + L + R + D +SE
Sbjct: 68 FFKQFSPEYLSGYNILGFDLPFLVNKAAAYDLKL-DGYGRLERGGQFRIID--LSENRFQ 124
Query: 1097 DNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAV 1156
N+ + + G + L+V+ L+RG++ L Y ++ V
Sbjct: 125 KNI---------------------------KVRINGTVTLDVYPLLRGKLSLPDYKLDTV 157
Query: 1157 AETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELA 1216
VL + ++ + + GP R +Y + + L L + + SE+A
Sbjct: 158 CREVLGETKRDVSYKEIPALYGQGP-EGRGLLGDYCLQDSALVLRLFEKFAPHVEMSEVA 216
Query: 1217 RVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA---------------ISPGNHQVASQ 1261
++ + V++ G Q RV + LL+ A Y+ +SP +
Sbjct: 217 KLAHLPMNRVMTDGQQIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDLSPSLNGPEEG 276
Query: 1262 PAMECL--------------PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
E V+EPE+GFY DPV V DF SLYPS++ A+NLCF T
Sbjct: 277 TEEENETENGAYTGDKGYQGATVLEPETGFYVDPVTVFDFASLYPSIIQAHNLCFTTLTR 336
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
+ KE G + +E + + YV P VR+ +L LL + L+ R
Sbjct: 337 RAETLKELKAG------------EDYEEFKVQGMSLFYVKPHVRRSLLGELLTDWLALRK 384
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
++ ++K APS Q L + + +QLA+KL N YG+T +G +PC E+A ++ GR
Sbjct: 385 KIRASMKT-APSDQRL--LLDKQQLAIKLTCNSVYGFTGVA-TGFLPCLEVAATVTTVGR 440
Query: 1428 STLEKAISFVNENEKWKA------------------------KVIYGDTDR-YTVC 1458
L F+ + +W +VIYGDTD + +C
Sbjct: 441 DMLLATRDFI--HTRWGTDFEALLVDAPELAAFRRPESLFGLRVIYGDTDSVFVLC 494
>gi|20089769|ref|NP_615844.1| DNA-directed DNA polymerase [Methanosarcina acetivorans C2A]
gi|19914708|gb|AAM04324.1| DNA-directed DNA polymerase [Methanosarcina acetivorans C2A]
Length = 937
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 209/428 (48%), Gaps = 69/428 (16%)
Query: 1018 DCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRT 1077
D V C E + + F +I+C +DPDI+ G++ Q + ++ ER L
Sbjct: 244 DGDVLSCMDETEMLNKFFEIICEYDPDIVAGYNHQDFDIPYITERVKAL----------- 292
Query: 1078 PLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDA--IIEDEWGRTHASGLHVGGRIV 1135
+A G++ S++ +D I ++G + + GR+V
Sbjct: 293 -----VAKGET-----------------INSVVGRDGSPIGYRKFGLITRTEMK--GRVV 328
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVL-RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVG 1194
++ L+R L YT+ AV++ +L R K+ P + W SG ++ V+Y
Sbjct: 329 VDALPLVRRAFSLKQYTLRAVSKELLSREKLDVPPLEMEEHWNDSGDKFRKF--VDYARR 386
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI-SP 1253
++L LE++ +L ++++ LA+V G ++ G VE++LLR ++ + + P
Sbjct: 387 DSELALELVLELRLLDKYIALAQVSGSLLQEIVDGGQTSMVETLLLREFGLKDRVILPKP 446
Query: 1254 GNHQVASQPAMEC---LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
G+ A + M V+EP+ G + V++LD++SLYP++M+A+NLC+ T
Sbjct: 447 GDELSAERYDMSSDLKGGEVLEPKKGLLEN-VLILDYKSLYPTIMMAHNLCYTTV----- 500
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
V+ RPD ++ PP+G +VPP+V +G++P +LE++L+ R K
Sbjct: 501 --------VTRDRPDGKTIK--------PPSGGEFVPPEVFRGIVPSILEDLLNKRGDTK 544
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
+ +K+ + + HR+ +A QLA+K++ N YGY+ R+ LA+++ GRS +
Sbjct: 545 KRMKRTSDENE--HRVLDATQLAIKILLNSFYGYSGYA-RARLYSLTLANAVTSFGRSNI 601
Query: 1431 EKAISFVN 1438
+N
Sbjct: 602 LNTRDLIN 609
>gi|18653816|ref|NP_570750.1| DNA polymerase [Macacine herpesvirus 5]
gi|7329997|gb|AAF59986.1|AF210726_7 polymerase [Rhesus monkey rhadinovirus H26-95]
gi|2625044|gb|AAC58687.1| DNA polymerase [rhesus monkey rhadinovirus H26-95]
gi|4494914|gb|AAD21336.1| DNA polymerase [Macaca mulatta rhadinovirus 17577]
Length = 1014
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 208/466 (44%), Gaps = 85/466 (18%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
IPD V E + F ++ F+ D L G++I L +L RA+ + LN+ +
Sbjct: 349 IPDTDVLEFPSEYDMLVSFFAMIRDFEVDFLTGYNISNFDLPYLITRASQVYNLRLNEYT 408
Query: 1076 RTPLESKIAAGD-SEISE-RGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
KI G E+ E RG + S + + G
Sbjct: 409 ------KIKTGSIFEVHEPRGGGGGFMRS----------------------VSKIKIAGI 440
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++++++ R ++ L+ Y ++ VA L K + ++ + F SGPG R + Y V
Sbjct: 441 VPIDMYQVCREKLSLSDYKLDTVARQCLGGKKEDVSYKDIPPLFRSGPG-GRAKVGSYCV 499
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
+ L ++++ + SE+A++ I VL+ G Q RV S LL A +N++ P
Sbjct: 500 MDSVLVMDLLKMFMIHVEISEIAKLAKIQARRVLTDGQQLRVFSCLLEAAARENFILPVP 559
Query: 1254 -----GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL-G 1307
G +Q A+ V+ P GFY +PV+V+DF SLYPS++ A+NLC+ T + G
Sbjct: 560 TPEGQGGYQGAT---------VINPIPGFYDEPVLVVDFASLYPSIIQAHNLCYSTMIHG 610
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLK----DELLIPPNGVMYVPPKVRKGVLPRLLEEIL 1363
+ DLH+ +L + ++ V +V R+ +L RLL L
Sbjct: 611 R----------------DLHLHPNLTPDDYETFVLSGGPVHFVKKHKRESLLGRLLTVWL 654
Query: 1364 STRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIV 1423
R +++ + A L I + +QLA+K+ N YG+T SG +PC +A+++
Sbjct: 655 EKRRAIRRTLA--ACDDPSLKTILDKQQLAIKVTCNAVYGFTGVA-SGLLPCINIAETVT 711
Query: 1424 QCGRSTLEKAISF----------------VNENEKWKAKVIYGDTD 1453
GR+ LE + S+ V + +V+YGDTD
Sbjct: 712 LRGRTMLEMSKSYVEALTTEDLRTRLGREVTARHGARFRVVYGDTD 757
>gi|46519343|gb|AAS99991.1| JM14 [Macaca fuscata rhadinovirus]
gi|365735200|gb|AEW87539.1| JM14 [Macaca fuscata rhadinovirus]
gi|365735371|gb|AEW87709.1| JM14 [Macaca fuscata rhadinovirus]
Length = 1012
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 210/466 (45%), Gaps = 85/466 (18%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
IPD V E + F +L F+ D L G++I L +L RA+ + LN+ +
Sbjct: 347 IPDTDVLEFPSEYDMLVSFFAMLRDFEVDFLTGYNISNFDLPYLITRASQVYNLRLNEYT 406
Query: 1076 RTPLESKIAAGD-SEISE-RGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
KI G E+ E RG + S + + G
Sbjct: 407 ------KIKTGSIFEVHEPRGGGGGFMRS----------------------VSKIKIAGI 438
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++++++ R ++ L+ Y ++ VA L K + ++ + F SGPG R + Y V
Sbjct: 439 VPIDMYQVCREKLSLSDYKLDTVARQCLGGKKEDVSYKDIPPLFRSGPG-GRAKVGSYCV 497
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
+ L ++++ + SE+A++ I VL+ G Q RV S LL A N++ P
Sbjct: 498 MDSVLVMDLLKMFMIHVEISEIAKLAKIQARRVLTDGQQLRVFSCLLEAAARDNFILPVP 557
Query: 1254 -----GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL-G 1307
G +Q A+ V+ P GFY +PV+V+DF SLYPS++ A+NLC+ T + G
Sbjct: 558 TPEGQGGYQGAT---------VINPIPGFYDEPVLVVDFASLYPSIIQAHNLCYSTMIHG 608
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLK----DELLIPPNGVMYVPPKVRKGVLPRLLEEIL 1363
+ DLH+ +L + ++ V +V R+ +L RLL L
Sbjct: 609 R----------------DLHLHPNLTPDDYETFVLSGGPVHFVKKHKRESLLGRLLTVWL 652
Query: 1364 STRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIV 1423
R +++ + A L I + +QLA+K+ N YG+T SG +PC +A+++
Sbjct: 653 EKRRAIRRTLA--ACDDPSLKTILDKQQLAIKVTCNAVYGFTGVA-SGLLPCINIAETVT 709
Query: 1424 QCGRSTLEKAISFV----NENEKWKA------------KVIYGDTD 1453
GR+ LE + S+V +N + + +V+YGDTD
Sbjct: 710 LRGRTMLEMSKSYVEALTTDNLRTRLGREVTACHGARFRVVYGDTD 755
>gi|21552715|gb|AAM62282.1|AF376034_2 DNA polymerase [Mustelid herpesvirus 1]
Length = 996
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 209/455 (45%), Gaps = 64/455 (14%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
IPD +VF C EI + F+ +L + + + G++I ++ +RA + L D +
Sbjct: 328 IPDTEVFECPSEIDMLYLFLTMLRDLNIEFITGYNIANFDFPYIIDRAVQVFNFNLKDFT 387
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R S + S G M A S + + G +
Sbjct: 388 RIKNSSMFEVHTPQNSSAGF---MRA-----------------------VSKIKISGFVC 421
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP-GRARYRCVEYVVG 1194
++++ + + ++ L+ Y + VA+ + + + ++ + F +GP GRA+ Y V
Sbjct: 422 IDMYNVCKEKLSLSNYKLNTVAKQCIGGQKEDVSYKDIPHLFRAGPAGRAKLGV--YCVK 479
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
+++ L+++ SE+A++ I VL+ G Q RV S LL +A QNY I P
Sbjct: 480 DSEIVLQLLRYFMTHIEISEIAKIAKIPTRRVLTDGQQIRVFSCLLDVAKDQNY--ILPQ 537
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ S V++P GFY P++V+DF SLYP+++ A NLC+ T ++P ++
Sbjct: 538 KDRGDSDGYQGAT--VIDPIPGFYNTPILVVDFASLYPTIIQANNLCYST----MIPHEK 591
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
L + + P + +L V +V + +L LL+ LS R +K+ ++
Sbjct: 592 --LHIYNISPHDYQTFNLSS------GPVHFVKKHKQVSLLATLLDAWLSKRRAIKKTLQ 643
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
+ L I + +QLA+K+ N YG+T SG +PC ++A++I GR LEK+
Sbjct: 644 SVTDPN--LRTILDKQQLAIKVTCNAVYGFTGVS-SGILPCLKIAETITYEGRRMLEKSK 700
Query: 1435 SFVNE--------------NEKWKA--KVIYGDTD 1453
+F+ N + A +VIYGDTD
Sbjct: 701 NFIENITPVELERIIHKPINCAYDANFRVIYGDTD 735
>gi|15723246|gb|AAL06316.1| DNA polymerase [Pan rhadino-herpesvirus 2]
Length = 364
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 189/417 (45%), Gaps = 65/417 (15%)
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEI 1090
F F +L FD DI+ G++I + +L RA + L D ++ S ++
Sbjct: 1 FLSFFSMLRDFDVDIITGYNISNFDIPYLITRATQVYNLQLKDYTKIKTGSMFEVHAPKV 60
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
G ++ S + + G I ++++++ R ++ L+
Sbjct: 61 GGGGFMRSV--------------------------SKIKISGIIAIDIYQVCREKLSLSD 94
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
Y + VA+ + K + ++ + + SG R R Y V + L ++++ +
Sbjct: 95 YKLNTVAQQCMGSKKEDVSYKDIPPLYRSG-ATGRSRVGRYCVMDSVLVMDLLKMFMIHI 153
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-----AISPGNHQVASQPAME 1265
SE+A++ I VL+ G Q RV S LL A +NY+ +PG +Q A+
Sbjct: 154 EISEIAKLAKIPVRRVLTDGQQIRVLSCLLEAAAQENYILPVPSTTAPGGYQGAT----- 208
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPD 1325
V+ P GFY DPV+V+DF SLYPS++ A+NLC+ T + D
Sbjct: 209 ----VINPMPGFYDDPVLVVDFASLYPSIIQAHNLCYSTLIHD---------------HD 249
Query: 1326 LHVLRDLKDE----LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
LH+ L + ++ V +V R+ +L +LL LS R KQ K LA
Sbjct: 250 LHLYHTLTEHDYETFVLSGGKVHFVKKHKRESLLAKLLTAWLSKR---KQIRKTLAECND 306
Query: 1382 -ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
L I + +QLA+K+ N YG+T +G +PC +A+++ GR+ LE++ ++V
Sbjct: 307 PTLKTILDKQQLAIKVTCNAVYGFTGVA-NGLLPCINIAETVTLQGRTMLEQSKAYV 362
>gi|422294898|gb|EKU22198.1| DNA polymerase delta subunit 1 [Nannochloropsis gaditana CCMP526]
Length = 569
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 139/252 (55%), Gaps = 34/252 (13%)
Query: 1215 LARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS--PGNHQVASQPAMECLPLVME 1272
+ARV G+ +L+RG Q +V SMLLR Q+ L I P N Q + E V+E
Sbjct: 1 MARVTGVPMAFLLTRGQQIKVFSMLLRKCR-QSALLIPNLPKNRQ--DEGTYEG-ATVIE 56
Query: 1273 PESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDL 1332
P+ FY DP+ LDF SLYPS+M A+NLC+ T L + ++ L SS+
Sbjct: 57 PKKAFYQDPIATLDFASLYPSIMQAFNLCYSTLLSR---EEKQALPPSSY---------- 103
Query: 1333 KDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQ 1391
+ P+ +V P VRKG+LP +L+E+L+ R K+A + +A + + + + N RQ
Sbjct: 104 ----ITTPSQESFVKPSVRKGILPLILDELLAAR---KRAKRDMAAATDPMEKAVQNGRQ 156
Query: 1392 LALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN---EK---WKA 1445
LALK+ AN YG+T A G++PC +A S+ GR L + +FV E+ EK A
Sbjct: 157 LALKISANSVYGFTGATV-GQLPCIPIASSVTSYGRDLLYQTKAFVEEHYTIEKGCSANA 215
Query: 1446 KVIYGDTDRYTV 1457
+V+YGDTD V
Sbjct: 216 EVVYGDTDSVMV 227
>gi|323716908|gb|ADY05324.1| DNA polymerase [Macaca fuscata lymphocryptovirus 2]
Length = 751
Score = 136 bits (343), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 220/463 (47%), Gaps = 65/463 (14%)
Query: 990 NDSDHAVEIYVLLYCKSES---HQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCS 1040
N++D ++I +L+ E ++R L+ + C+ V+ E+ + F +++
Sbjct: 310 NEADLILQISCVLWSTGEEAGRYRRILLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRD 369
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+I+ G+++ ++ +RA H+ I+ L A G E+ R D
Sbjct: 370 LSVEIVTGYNVANFDWPYVLDRARHI-----YGINPASLGKIRAGGVCEV--RRPHD--- 419
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+ L + + + + G I ++++ + R ++ L+ Y ++ VA +
Sbjct: 420 ----AGKGFLRAN------------TKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHL 463
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L K + ++ + + FA GPG R R Y V + L ++++N + +E+A++
Sbjct: 464 LGAKKEDVHYKEIPRLFAEGPG-GRRRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAH 522
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-GNHQVASQPAMECLPLVMEPESGFYA 1279
I VL G Q RV S LL A +N++ P + + Q A V++P SGFY
Sbjct: 523 IPCRRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT-----VIQPLSGFYN 577
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIP 1339
PV+V+DF SLYPS++ A+NLC+ T I P +E+ L + RP +D
Sbjct: 578 SPVLVVDFASLYPSIIQAHNLCYST---MITPGEEHRL--AGLRPG-------EDYESFR 625
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-----PSQQILHRIFNARQLAL 1394
G MY V+K V L +L++ + ++AIKKL P Q+ I + +QLA+
Sbjct: 626 LTGGMY--HFVKKHVHESFLASLLTSWLAKRKAIKKLLAACEDPRQKT---ILDKQQLAI 680
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
K N YG+T +G PC +A+++ GR+ LE+A +FV
Sbjct: 681 KCTCNAVYGFTGVA-NGLFPCLSIAETVTLQGRTMLERAKAFV 722
>gi|410670688|ref|YP_006923059.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
gi|409169816|gb|AFV23691.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
Length = 913
Score = 136 bits (343), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 206/422 (48%), Gaps = 71/422 (16%)
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
S E + + F ++ +DPDI+ G++I + ++ +R + +LND P+
Sbjct: 240 SNEADMLNRFFEVFQQYDPDIIGGYNILDFDIPYIVDR-----VSILND----PVS---- 286
Query: 1085 AGDSEISERGITDNMLAEPVVAES--LLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLM 1142
+ +PV LL+ I RT S + GR+V++ L+
Sbjct: 287 ---------------IVKPVTGRDGRLLSYRKI----GTRTMVS---MPGRVVVDALPLV 324
Query: 1143 RGEVKLNMYTVEAVAETVLR-RKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
R + L YT+ VA+ +L K+ P + W SG R+ ++Y + L +E
Sbjct: 325 RSQYSLKRYTLRNVAKELLEMEKLDIAPSEMEDHWNDSGEKILRF--IDYAQRDSDLAME 382
Query: 1202 IMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLR-LAHTQNYLAISPGNHQVAS 1260
++ +L ++++ +A+V G V+ G V+++LLR + P + +V+
Sbjct: 383 LLMKLRLLDKYIAVAQVSGSLLQEVVDGGQTSMVDNLLLREYGKRDRVIPPKPSDDEVSF 442
Query: 1261 QP-AMECLP--LVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTL 1317
+ + E L V+EP+ G + ++++D++SLYP++M+A+NLC+ T + K P
Sbjct: 443 RNLSSEGLKGGEVLEPKKGLLEN-IIIMDYKSLYPTIMMAHNLCYTTVVEKDRP------ 495
Query: 1318 GVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA 1377
K E + PP+G +VP +V KGV+P +LE +L+ RI K+ ++ A
Sbjct: 496 ---------------KGETIKPPSGGEFVPAEVFKGVMPAILENLLNRRIETKKRMRSAA 540
Query: 1378 PSQQILHRIFNARQLALKLIANVTYGYTAAGFS-GRMPCAELADSIVQCGRSTLEKAISF 1436
++ HR+ +A QLALK++ N YGY+ G++ R+ LA+++ GR + S
Sbjct: 541 TEEE--HRVLDATQLALKILLNSFYGYS--GYTRARLYSLPLANAVTSFGRENILNTRSI 596
Query: 1437 VN 1438
+N
Sbjct: 597 IN 598
>gi|15723248|gb|AAL06317.1| DNA polymerase [Pan rhadino-herpesvirus 2]
Length = 389
Score = 136 bits (343), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 189/417 (45%), Gaps = 65/417 (15%)
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEI 1090
F F +L FD DI+ G++I + +L RA + L D ++ S ++
Sbjct: 1 FLSFFSMLRDFDVDIITGYNISNFDIPYLITRATQVYNLQLKDYTKIKTGSMFEVHAPKV 60
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
G ++ S + + G I ++++++ R ++ L+
Sbjct: 61 GGGGFMRSV--------------------------SKIKISGIIAIDMYQVCREKLSLSD 94
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
Y + VA+ + K + ++ + + SG R R Y V + L ++++ +
Sbjct: 95 YKLNTVAQQCMGSKKEDVSYKDIPPLYRSG-ATGRSRVGRYCVMDSVLVMDLLKMFMIHI 153
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-----AISPGNHQVASQPAME 1265
SE+A++ I VL+ G Q RV S LL A +NY+ +PG +Q A+
Sbjct: 154 EISEIAKLAKIPVRRVLTDGQQIRVLSCLLEAAAQENYILPVPSTTAPGGYQGAT----- 208
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPD 1325
V+ P GFY DPV+V+DF SLYPS++ A+NLC+ T + D
Sbjct: 209 ----VINPMPGFYDDPVLVVDFASLYPSIIQAHNLCYSTLIHD---------------HD 249
Query: 1326 LHVLRDLKDE----LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
LH+ L + ++ V +V R+ +L +LL LS R KQ K LA
Sbjct: 250 LHLYHTLTEHDYETFVLSGGKVHFVKKHKRESLLAKLLTAWLSKR---KQIRKTLAECND 306
Query: 1382 -ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
L I + +QLA+K+ N YG+T +G +PC +A+++ GR+ LE++ ++V
Sbjct: 307 PTLKTILDKQQLAIKVTCNAVYGFTGVA-NGLLPCINIAETVTLQGRTMLEQSKAYV 362
>gi|449490962|ref|XP_004158760.1| PREDICTED: uncharacterized protein LOC101230122 [Cucumis sativus]
Length = 1350
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 67/75 (89%)
Query: 1385 RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWK 1444
++FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR TLE AISFVN EKWK
Sbjct: 82 QVFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRRTLESAISFVNSQEKWK 141
Query: 1445 AKVIYGDTDRYTVCI 1459
AKVIYGDTD V +
Sbjct: 142 AKVIYGDTDSMFVLL 156
>gi|168023037|ref|XP_001764045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684784|gb|EDQ71184.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1227
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 236/516 (45%), Gaps = 76/516 (14%)
Query: 955 EQLTLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVEIYVLLYCKSESHQRS 1012
E+ ++ IE + G P D + V++ L F+ D ++ ++ S+ Q
Sbjct: 401 EEASIADIEGLSNLVGGGSAIPSRDPVLVISHILHFQGHQDGTKQV---VFTHSKGPQEG 457
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKI-LCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
+P ++ + EI + + K DPDI+ + ++ SL +LAER L +G
Sbjct: 458 --ALPGVELRMFDSEIVMLRAWHKYWYLEVDPDIVCVYQMKK-SLRYLAERFKVLKLGTF 514
Query: 1072 NDISR-----TPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
D+ R T ++S + G I ++ + + V
Sbjct: 515 -DLGRRMGQTTEVKSVVTYGKHWIKKQARMSSTSNQEVFRA------------------- 554
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
++ GR+V+++ R++ L+ +T+E ++ L ++ +++ + G R
Sbjct: 555 --YMEGRLVIDMLRVVLVSFNLSTFTLEECSQVFLGAPKEALSTAAVSELWQGKYGGLR- 611
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R + Y + A++ L++M +L I T E+ARV G+ VL + R++S+LLR A +
Sbjct: 612 RLLLYSLHEAEVVLKLMERLQTIPETVEMARVTGLTLSDVLYKAQMVRIQSLLLRSARKE 671
Query: 1247 NYL-AISPGNHQVASQPAMECLPLVMEPE----SGFYADPVVVLDFQSLYPSMMIAYNLC 1301
+L + N Q++ P ++ P+ + FY DPV +LDF SLYPS+ +AYNLC
Sbjct: 672 GWLLGGTTLNGQLSESP------FLLHPKDNHTAAFYQDPVAILDFASLYPSLFMAYNLC 725
Query: 1302 FCTCL----GKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPR 1357
+ T + K +PS +L+ G +V VR+GVLPR
Sbjct: 726 YTTLVHPEDAKSIPSH---------------------QLITSLTGAQFVVSSVRRGVLPR 764
Query: 1358 LLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
+ +++ R + + + S + + + + RQ ALKL +N YG+T A S +
Sbjct: 765 ICGALITARKQARDRMTQEHISSE-EYAVLDGRQKALKLCSNALYGFTGASASPQQ-AVP 822
Query: 1418 LADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
LAD+ + G ++ ++A+ V + K +VIY TD
Sbjct: 823 LADTCLSMGAASCKQAVQLVGSIFE-KVEVIYAQTD 857
>gi|227452673|dbj|BAH57334.1| DNA polymerase [Hipposideros diadema herpesvirus]
Length = 747
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 221/495 (44%), Gaps = 74/495 (14%)
Query: 991 DSDHAVEIYVLLY--CKSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSFD 1042
D D ++I +++ CK + +++ L + C +VF E+ + F + +
Sbjct: 233 DVDMVIKISCVIWTPCKEDPNKQILFTVGTCDGIEGVEVFEFPSELDMLYAFFYFIRDSN 292
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
+I+ G++I +L ERAA + +N SR A RG + L
Sbjct: 293 IEIVTGYNIANFDFPYLIERAAVVYNLDVNSFSRMSRGGLFAVH----KPRGEAGSFLRA 348
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
S + + G + ++++ + R ++ L+ Y + VA L
Sbjct: 349 ----------------------TSKIKISGVVAIDMYMVCRDKLSLSDYKLNTVAAACLG 386
Query: 1163 RKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGID 1222
+ + ++ + F SGP R R +Y V A L ++++ + +E+A++ I
Sbjct: 387 AQKDDVSYKDIPTLFRSGP-RGRATLGKYCVKDAALVMDLLKHFMIHVEITEIAKLARIP 445
Query: 1223 FFSVLSRGSQYRVESMLLRLAHTQNY-LAISPGNHQVASQPAMECLPLVMEPESGFYADP 1281
VL+ G Q R+ LL +A NY L + G+ Q A V+ P SGFY P
Sbjct: 446 TRRVLTDGQQIRIFVCLLGVAKDHNYILPTNNGSPDAGYQGAT-----VINPLSGFYTKP 500
Query: 1282 VVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPN 1341
V+VLDF S+YPS++ A+NLC+ T I P + + +PD + + +
Sbjct: 501 VLVLDFASMYPSIIQAHNLCYSTL---IPPGQLERY--PNLKPDDY------ESFQVSAG 549
Query: 1342 GVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK-LAPSQQILHRIFNARQLALKLIANV 1400
V +V VR +L LL+ L+ R +++ + + L P+ L I + +QLA+K+ N
Sbjct: 550 TVHFVKRHVRTSLLSILLQNWLAKRKEIRRNMAQCLDPN---LKTILDKQQLAIKVTCNS 606
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN----------------ENEKWK 1444
YG+T SG +PC +A+++ GR LE+ ++ N + K
Sbjct: 607 VYGFTGVA-SGMLPCLTIAETVTLQGRVMLERTKEYIERLSISDLDRISPPRDPRNPEAK 665
Query: 1445 AKVIYGDTD-RYTVC 1458
VIYGDTD ++ +C
Sbjct: 666 LSVIYGDTDSQFILC 680
>gi|196017077|ref|XP_002118385.1| hypothetical protein TRIADDRAFT_34129 [Trichoplax adhaerens]
gi|190579015|gb|EDV19124.1| hypothetical protein TRIADDRAFT_34129 [Trichoplax adhaerens]
Length = 230
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 100/193 (51%), Gaps = 42/193 (21%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FS+RI +ID YM+ P+P D+CYS + V VP++RV+G TPAGQK CLHIH PY
Sbjct: 1 MFSIRIFTIDFYMSRPVPKLDVCYSPFRKTSVKRVPILRVFGPTPAGQKACLHIHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGS-------KRQHVHECSLVRAK 122
LYVP Q D Y+ +L+++KA+ S + +Q V + SLV
Sbjct: 61 LYVPYDG-----SQPVDKYLEEFALSIDKAINASMSESNAASSNSWHQQTVFKISLVNGV 115
Query: 123 K------------------------------GGAVFDKSLQPHESHIPFLLQFLVDYNLY 152
GAV +K QPHE+H+PF LQF +DYNLY
Sbjct: 116 PMYGYNPSPRPFLKIYIYNPNLVGKIADLLLTGAVMNKVFQPHEAHLPFTLQFFIDYNLY 175
Query: 153 GMGHLHLSKLKFR 165
GM + L+ +KFR
Sbjct: 176 GMNWIKLNAVKFR 188
>gi|9625965|ref|NP_040211.1| DNA polymerase [Saimiriine herpesvirus 2]
gi|118886|sp|P24907.1|DPOL_SHV21 RecName: Full=DNA polymerase
gi|67033|pir||DJBEM2 DNA-directed DNA polymerase (EC 2.7.7.7) - saimiriine herpesvirus 1
(strain 11)
gi|60330|emb|CAA45632.1| DNA polymerase [Saimiriine herpesvirus 2]
gi|331057|gb|AAA46165.1| DNA polymerase [Saimiriine herpesvirus 2]
Length = 1009
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 208/462 (45%), Gaps = 75/462 (16%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
+ + +V+ EI + F ++ F+ +I+ G++I L +L +RA + L+D
Sbjct: 334 AVENTEVYEFPSEIDMLHGFFSLIRDFNVEIITGYNISNFDLPYLIDRATQIYNIKLSDY 393
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
SR S + + G ++ S + + G I
Sbjct: 394 SRVKTGSIFQVHTPKDTGNGFMRSV--------------------------SKIKISGII 427
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP-GRARYRCVEYVV 1193
++++ + + ++ L+ Y ++ VA + K + ++ + F SGP GRA+ Y V
Sbjct: 428 AIDMYIVCKDKLSLSNYKLDTVANHCIGAKKEDVSYKDIMPLFMSGPEGRAKIGL--YCV 485
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY-LAIS 1252
+ L ++++ + SE+A++ I VL+ G Q RV S LL A +NY L +S
Sbjct: 486 IDSVLVMKLLKFFMIHVEISEIAKLAKIPTRRVLTDGQQIRVFSCLLAAARAENYILPVS 545
Query: 1253 PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
+ Q A V+ P GFY + V+V+DF SLYPS++ A+NLC+ T ++P
Sbjct: 546 NDVNADGFQGAT-----VINPIPGFYNNAVLVVDFASLYPSIIQAHNLCYST----LIPH 596
Query: 1313 KENTLGVSSFRPDLHVLRDLK----DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
LH LK + ++ + +V ++ +L RLL LS R
Sbjct: 597 HA-----------LHNYPHLKSSDYETFMLSSGPIHFVKKHIQASLLSRLLTVWLSKRKA 645
Query: 1369 VKQAIKKLAPSQQI-LHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
++Q KLA + + I + +QLA+K+ N YG+T SG +PC +A+++ GR
Sbjct: 646 IRQ---KLAECEDLDTKTILDKQQLAIKVTCNAVYGFTGVA-SGLLPCISIAETVTLQGR 701
Query: 1428 STLEKAISF----------------VNENEKWKAKVIYGDTD 1453
+ LEK+ F V K +VIYGDTD
Sbjct: 702 TMLEKSKIFIEAMTPDTLQEIVPHIVKHEPDAKFRVIYGDTD 743
>gi|402810719|gb|AFR11403.1| DNA-dependent DNA polymerase, partial [Ursid gammaherpesvirus 1]
Length = 446
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 216/460 (46%), Gaps = 64/460 (13%)
Query: 991 DSDHAVEIYVLLYCKSESHQRSLV-------GIPDCKVFVCSKEIHLFSHFIKILCSFDP 1043
D D ++I +++ + +R+++ IP+ +++ E+ LF F ++ ++
Sbjct: 12 DEDLVIQISCIIWTVGDDSKRNILLSLGTCDPIPNTEIYEFPSELDLFYAFFSLVRDYNI 71
Query: 1044 DILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEP 1103
+ + G++I +L ERA ++ P+++ + E + P
Sbjct: 72 EFVTGYNISNFDFPYLIERA--------TNVYNIPIKAFTKVKSGGVFE-------VHRP 116
Query: 1104 VVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRR 1163
+ S + + + V G I ++++ + + ++ L+ Y ++ VA+ L
Sbjct: 117 KESTSSFMR-----------AVTKVRVSGLIPIDMYTVCKDKLSLSNYKLDTVAKQCLGT 165
Query: 1164 KIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDF 1223
+ + ++ + F GPG R R Y V + + L++M SE+A++ I
Sbjct: 166 QKEDVSYKEIPSLFRQGPG-GRSRIGLYCVKDSIIVLDLMKYFMTHIEISEIAKLAKIQP 224
Query: 1224 FSVLSRGSQYRVESMLLRLAHTQNY-LAISPGNHQVASQPAMECLPLVMEPESGFYADPV 1282
VL+ G Q R+ S LL A +NY L +S + Q A V++P GFY PV
Sbjct: 225 RRVLTDGQQIRIFSCLLATARGENYILPVSSSDGGDGYQGAT-----VIDPVPGFYNTPV 279
Query: 1283 VVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKD----ELLI 1338
+V+DF SLYPS++ A+NLC+ T + +LH LK+ I
Sbjct: 280 LVVDFASLYPSIIQAHNLCYSTLI---------------LAENLHRHPHLKNTDYETFHI 324
Query: 1339 PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-PSQQILHRIFNARQLALKLI 1397
V +V P V + +L +LL+ L+ R +K+ +++ A P Q+ L + +QLA+K+
Sbjct: 325 SSGPVHFVKPHVTESLLGKLLKIWLAKRKAIKKQLEQCADPVQKTL---LDKQQLAIKVT 381
Query: 1398 ANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
N YG+T +G PC ++A+++ GR+ LE++ +F+
Sbjct: 382 CNSVYGFTGVA-TGLFPCVKIAETVTLQGRNMLERSRAFI 420
>gi|15723250|gb|AAL06318.1| DNA polymerase [Pan rhadino-herpesvirus 2]
Length = 389
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 189/417 (45%), Gaps = 65/417 (15%)
Query: 1031 FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEI 1090
F F +L FD DI+ G++I + +L RA + L D ++ S ++
Sbjct: 1 FLSFFGMLRDFDVDIITGYNISNFDIPYLITRATQVYNLQLKDYTKIKTGSMFEVHAPKV 60
Query: 1091 SERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNM 1150
G ++ S + + G I ++++++ R ++ L+
Sbjct: 61 GGGGFMRSV--------------------------SKIKISGIIAIDMYQVCREKLSLSD 94
Query: 1151 YTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMIN 1210
Y + VA+ + K + ++ + + SG R R Y V + L ++++ +
Sbjct: 95 YKLNTVAQQCMGSKKEDVSYKDIPPLYRSG-ATGRSRVGRYCVMDSVLVMDLLKMFMIHI 153
Query: 1211 RTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL-----AISPGNHQVASQPAME 1265
SE+A++ I VL+ G Q RV S LL A +NY+ +PG +Q A+
Sbjct: 154 EISEIAKLAKIPVRRVLTDGQQIRVLSCLLEAAAQENYILPVPSTTAPGGYQGAT----- 208
Query: 1266 CLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPD 1325
V+ P GFY DPV+V+DF SLYPS++ A+NLC+ T + D
Sbjct: 209 ----VINPMPGFYDDPVLVVDFASLYPSIIQAHNLCYSTLIHD---------------HD 249
Query: 1326 LHVLRDLKDE----LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ 1381
LH+ L + ++ V +V R+ +L +LL LS R KQ K LA
Sbjct: 250 LHLYHTLTEHDYETFVLSGGKVHFVKKHKRESLLAKLLTAWLSKR---KQIRKTLAECND 306
Query: 1382 -ILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
L I + +QLA+K+ N YG+T +G +PC +A+++ GR+ LE++ ++V
Sbjct: 307 PTLKTILDKQQLAIKVTRNAVYGFTGVA-NGLLPCINIAETVTLQGRTMLEQSKAYV 362
>gi|452210573|ref|YP_007490687.1| Archaeal DNA polymerase I [Methanosarcina mazei Tuc01]
gi|452100475|gb|AGF97415.1| Archaeal DNA polymerase I [Methanosarcina mazei Tuc01]
Length = 926
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 203/425 (47%), Gaps = 65/425 (15%)
Query: 1021 VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLE 1080
V C E + + F +I+C +DPDI+ G++ Q + ++ +R L
Sbjct: 239 VLPCKDETDMLNRFFEIICEYDPDIVAGYNHQDFDIPYITDRVKALN------------- 285
Query: 1081 SKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWR 1140
A G++ PVV I +G + V GR+V++
Sbjct: 286 ---AKGEN------------INPVVGRD---GSHIGYRRFGLITRT--EVKGRVVVDALP 325
Query: 1141 LMRGEVKLNMYTVEAVAETVL-RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLN 1199
L+R L YT+ AV++ +L R K+ P + W SG ++ V+Y A+L
Sbjct: 326 LVRRAFSLKQYTLRAVSKELLSREKLDVPPLEMEEHWNDSGEKFLKF--VDYARRDAELA 383
Query: 1200 LEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI-SPGNHQV 1258
LE++ L ++++ LA+V G ++ G VE++LLR ++ + + PG+
Sbjct: 384 LELVLNLRLLDKYIALAQVSGSLLQEIVDGGQTSMVETLLLREFGLRDRVILPKPGDELS 443
Query: 1259 ASQPAMEC---LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
A + M V+EP+ G + V++LD++SLYP++M+A+NLC+ T
Sbjct: 444 AERYDMSSDLKGGEVLEPKKGLLEN-VLILDYKSLYPTIMMAHNLCYTTV---------- 492
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
V+ RPD E + PP+G +VPP+V +G++P +LE++L+ R K+ ++
Sbjct: 493 ---VTKDRPD--------GEAIKPPSGGEFVPPEVYRGIVPSILEDLLNQRGETKKRMRL 541
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + +R+ +A QLA+K++ N YGY+ R+ LA+++ GRS +
Sbjct: 542 TSDKNE--YRVLDATQLAIKILLNSFYGYSGYA-RARLYSLTLANAVTSFGRSNILNTRD 598
Query: 1436 FVNEN 1440
+N +
Sbjct: 599 LINND 603
>gi|52493129|gb|AAU81562.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
Length = 673
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 210/532 (39%), Gaps = 118/532 (22%)
Query: 989 ENDSDHAVEIYVLLYCKSESHQ--RSLVGIPDCK----------VFVCSKEIHLFSHFIK 1036
+N D ++I +++C ++ R L + C+ V C E L F
Sbjct: 8 DNACDVVIQISAIVHCLKTGNEEGRLLFSLGSCRLPAETASSATVIECDSEYELLLAFFT 67
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGL--LNDISRTPLESKIAAGDSEISERG 1094
F P+ L G++I G L FL +AA + L + R L I ++SE
Sbjct: 68 FFKQFSPEYLSGYNILGFDLPFLVNKAAAYDLKLDGYGRLERGGLFRVI-----DLSENR 122
Query: 1095 ITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVE 1154
N+ + + G + L+V+ L+RG++ L Y ++
Sbjct: 123 FQKNI---------------------------KVRINGTVTLDVYPLLRGKLSLPNYKLD 155
Query: 1155 AVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSE 1214
V VL + ++ + + GP R +Y + + L + + SE
Sbjct: 156 TVCREVLGETKRDVSYKEIPALYGRGP-EGRGLLGDYCLQDSALVCRLFEKFAPHVEMSE 214
Query: 1215 LARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA-----------ISPGNHQVASQPA 1263
+A++ + V++ G Q RV + LL+ A Y+ P P
Sbjct: 215 VAKLAHLPMNRVMTDGQQIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDRGPSLKGPD 274
Query: 1264 MECL------------------PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
V+EPE+GFY DPV V DF SLYPS++ A+NLCF T
Sbjct: 275 EGTEEENETENGAYKRDKGYQGATVLEPETGFYVDPVTVFDFASLYPSIIQAHNLCFTTL 334
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
+ KE G + +E + + YV P VR+ +L LL + L+
Sbjct: 335 TRRAETLKELKAG------------EDYEEFKVQGMSLYYVKPHVRRSLLGELLTDWLAL 382
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R ++ ++K APS Q L + + +QLA+KL N YG+T +G +PC E+A ++
Sbjct: 383 RKKIRASMKT-APSDQRL--LLDKQQLAIKLTCNSVYGFTGVA-TGFLPCLEVAATVTTV 438
Query: 1426 GRSTLEKAISFVNENEKWKA------------------------KVIYGDTD 1453
GR L F+ + +W +VIYGDTD
Sbjct: 439 GRDMLLATRDFI--HTRWGTDFEALLTDAPELAAFRRPESLFGLRVIYGDTD 488
>gi|253745698|gb|EET01445.1| DNA polymerase delta, catalytic subunit [Giardia intestinalis ATCC
50581]
Length = 1299
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 147/587 (25%), Positives = 242/587 (41%), Gaps = 103/587 (17%)
Query: 934 RSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSINVVALAF----- 988
+++ T L + + DP A + +LS ++++ S PD D I + +
Sbjct: 221 QTEYTHLVALNYNDPCYA-INAPIRVLSFDIESVSLQGGFPDAASDYIITICSSLYILTQ 279
Query: 989 -ENDSDHAVEIYVLLYCKSESHQRSLVGIPDCKVFVCSKEIHL-FSHFIKILCSFDPDIL 1046
D+ HA VL C +VG D F +E+ L F++ I++ FDPDI
Sbjct: 280 STADTPHANIALVLHSCAP------IVG-ADVFCFDTERELLLAFNYLIQL---FDPDIF 329
Query: 1047 MGWDIQGGSLGFLAERA------AHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
G++I G ++ +RA H G + + L + G S +
Sbjct: 330 TGYNIDGFDFNYIFKRAEVSQVSTHSLPGFMG--TDQLLGLMLTKGSSSYASTLTRSLSS 387
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+ + L +K + G+ ++ GR+ +++ + KL YT+ +V
Sbjct: 388 SMTITVSHLQSK------QVGKRDTYEINCPGRMSMDILPNIIHNYKLRSYTLNSVCARF 441
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L + + + ++T F R R Y + KL L++M +L ++ T EL RV G
Sbjct: 442 LNEQKDDVHYSMITPLFMQNE-YGRRRITSYCIKDCKLPLKLMEKLMILVNTIELCRVSG 500
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYL----AISPGNHQVASQPAMECL--PLVMEPE 1274
+ +L G Q R+ S+L R + ++YL + G H E L V+ P+
Sbjct: 501 LCGCLLLYSGQQIRILSLLYRFSAAESYLIPYRMRTGGGHSAGFSGDSEGLEGATVLNPK 560
Query: 1275 SGFYAD--PVVVLDFQSLYPSMMIAYNLCFCTCL-------------GKILPSKENTLGV 1319
GFY+D P+ LDF SLYP+++IA+NLC+ T + K + + V
Sbjct: 561 RGFYSDKQPIATLDFNSLYPTIIIAHNLCYSTMISDTPDIDFLIQMYAKSRGEDLSDINV 620
Query: 1320 SSFRPDLHVL---------------------------------------RDLKDELLIPP 1340
S +R L L +D L
Sbjct: 621 SVYRQQLSSLLRLEGASISATVDDTNGSDDSDDSDDVSRSSIIKSSAAQKDTATLCLSAS 680
Query: 1341 NGVMYVPPK----VRKGVLP----RLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
N ++ V P ++K V P ++L+ +L R KQ +KK + + + N RQL
Sbjct: 681 NELITVTPIKARFLKKTVFPGILPKILQVLLDARKKAKQDMKK--ATDPLAKDVLNGRQL 738
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE 1439
ALKLIAN YG+T A GR+P E++ SI GR + + V E
Sbjct: 739 ALKLIANSLYGFTGALTFGRLPSQEISSSITAFGREMINHTKNVVEE 785
>gi|21228106|ref|NP_634028.1| DNA polymerase delta catalytic subunit [Methanosarcina mazei Go1]
gi|20906547|gb|AAM31700.1| DNA polymerase delta catalytic subunit [Methanosarcina mazei Go1]
Length = 933
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 203/425 (47%), Gaps = 65/425 (15%)
Query: 1021 VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLE 1080
V C E + + F +I+C +DPDI+ G++ Q + ++ +R L
Sbjct: 246 VLPCKDETDMLNRFFEIICEYDPDIVAGYNHQDFDIPYITDRVKALN------------- 292
Query: 1081 SKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWR 1140
A G++ PVV I +G + V GR+V++
Sbjct: 293 ---AKGEN------------INPVVGRD---GSHIGYRRFGLITRT--EVKGRVVVDALP 332
Query: 1141 LMRGEVKLNMYTVEAVAETVL-RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLN 1199
L+R L YT+ AV++ +L R K+ P + W SG ++ V+Y A+L
Sbjct: 333 LVRRAFSLKQYTLRAVSKELLSREKLDVPPLEMEEHWNDSGEKFLKF--VDYARRDAELA 390
Query: 1200 LEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI-SPGNHQV 1258
LE++ L ++++ LA+V G ++ G VE++LLR ++ + + PG+
Sbjct: 391 LELVLNLRLLDKYIALAQVSGSLLQEIVDGGQTSMVETLLLREFGLRDRVILPKPGDELS 450
Query: 1259 ASQPAMEC---LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
A + M V+EP+ G + V++LD++SLYP++M+A+NLC+ T
Sbjct: 451 AERYDMSSDLKGGEVLEPKKGLLEN-VLILDYKSLYPTIMMAHNLCYTTV---------- 499
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
V+ RPD E + PP+G +VPP+V +G++P +LE++L+ R K+ ++
Sbjct: 500 ---VTKDRPD--------GEAIKPPSGGEFVPPEVYRGIVPSILEDLLNQRGETKKRMRL 548
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + +R+ +A QLA+K++ N YGY+ R+ LA+++ GRS +
Sbjct: 549 TSDKNE--YRVLDATQLAIKILLNSFYGYSGYA-RARLYSLTLANAVTSFGRSNILNTRD 605
Query: 1436 FVNEN 1440
+N +
Sbjct: 606 LINND 610
>gi|323716888|gb|ADY05318.1| DNA polymerase [Piliocolobus badius lymphocryptovirus 1]
Length = 751
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 229/497 (46%), Gaps = 79/497 (15%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S V+A E N++D ++I +L+ E ++R
Sbjct: 276 GDLSVHREDTSWPSYTVLAFDIECLGEEGFPTATNEADLILQISCVLWATGEEAGHYRRI 335
Query: 1013 LVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C+ V+ E+ + F +++ +I+ G+++ ++ +RA H+
Sbjct: 336 LLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHI 395
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
I+ L G E+ T + L + +
Sbjct: 396 -----YGINPASLGKIRVGGSCEVRRPHDT---------GKGFLRAN------------T 429
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ + G I ++++ + R ++ L+ Y ++ VA +L + + ++ + + FA GP R
Sbjct: 430 KVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLAAQKEDVHYKEIPRLFAQGP-EGRR 488
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A +
Sbjct: 489 RLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKE 548
Query: 1247 NYLAISPG-NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
N++ P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T
Sbjct: 549 NFILPMPSPSDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST- 602
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
I P +E+ L + RP D + L G+ + V+K V L +L++
Sbjct: 603 --MITPGEEHRL--AGLRPG----EDYESFRLT--GGIYHF---VKKHVHESFLASLLTS 649
Query: 1366 RIMVKQAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
+ ++AIKKL P Q+ I + +QLA+K N YG+T +G PC +A+
Sbjct: 650 WLAKRKAIKKLLAACEDPRQKT---ILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAE 705
Query: 1421 SIVQCGRSTLEKAISFV 1437
++ GR+ LE+A +FV
Sbjct: 706 TVTLQGRTMLERAKAFV 722
>gi|323716879|gb|ADY05315.1| DNA polymerase [Macaca fuscata lymphocryptovirus 1]
Length = 751
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 221/463 (47%), Gaps = 65/463 (14%)
Query: 990 NDSDHAVEIYVLLYCKSES---HQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCS 1040
N++D ++I +L+ E ++R L+ + C+ V+ E+ + F +++
Sbjct: 310 NEADLILQISCVLWSTGEEAGRYRRILLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRD 369
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+ +I+ G+++ ++ +RA H+ I+ L A G E+ R D
Sbjct: 370 LNVEIVTGYNVANFDWPYVLDRARHI-----YGINPASLGKIRAGGVCEV--RRPHD--- 419
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+ L + + + + G I ++++ + R ++ L+ Y ++ VA +
Sbjct: 420 ----AGKGFLRAN------------TKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHL 463
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L K + ++ + + FA GP R R R Y V + L ++++N + +E+A++
Sbjct: 464 LGAKKEDVHYKEIPRLFAEGP-RGRRRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAH 522
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-GNHQVASQPAMECLPLVMEPESGFYA 1279
I VL G Q RV S LL A +N++ P + + Q A V++P SGFY
Sbjct: 523 IPCRRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT-----VIQPLSGFYN 577
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIP 1339
PV+V+DF SLYPS++ A+NLC+ T I P +E+ L + RP D + L
Sbjct: 578 SPVLVVDFASLYPSIIQAHNLCYST---MITPGEEHRL--AGLRPG----EDYESFRLT- 627
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-----PSQQILHRIFNARQLAL 1394
G + V+K V L +L++ + ++AIKKL P Q+ I + +QLA+
Sbjct: 628 -GGTYHF---VKKHVHESFLASLLTSWLAKRKAIKKLLAACEDPRQKT---ILDKQQLAI 680
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
K N YG+T +G PC +A+++ GR+ LE+A +FV
Sbjct: 681 KCTCNAVYGFTGVA-NGLFPCLSIAETVTLQGRTMLERAKAFV 722
>gi|323716899|gb|ADY05321.1| DNA polymerase [Pithecia pithecia lymphocryptovirus 1]
Length = 748
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 216/465 (46%), Gaps = 65/465 (13%)
Query: 990 NDSDHAVEIYVLLYC---KSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCS 1040
N++D ++I +L+ + ++R L+ + C +++ E+ L F +++
Sbjct: 307 NETDLILQISCVLWSVGNPTSDYRRILLTLGTCADIEGVEIYEFPSEMDLIYAFFQLIRD 366
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNM 1099
+ +I+ G+++ ++ +RA H+ GI A +I G+ +
Sbjct: 367 LNVEIITGYNVANFDWPYIMDRARHIYGIN--------------PASLGKIKMGGVCE-- 410
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
+ P A + ++ + + + G I ++++ + R ++ L+ Y ++ VA+
Sbjct: 411 VRRPHDAGKMFSR-----------ACTKVRISGIIPIDMYSVCRDKLSLSDYKLDTVAKR 459
Query: 1160 VLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVF 1219
+L K + ++ + F +GP R R Y V + L ++++N SE+A++
Sbjct: 460 LLGTKKEDVHYKEIPHLFRAGP-EGRRRLGMYCVQDSALVMDLLNHFVTHVEISEIAKIA 518
Query: 1220 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYA 1279
I VL G Q RV S LL A +N++ P Q + + + V++P SGFY
Sbjct: 519 NIPCRRVLDDGQQIRVFSCLLAAAQKENFILPMP---QPSDRDGYQG-ATVIQPISGFYN 574
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK-----D 1334
PV+V+DF SLYPS++ A+NLC+ T I P +E+ LRDL+ +
Sbjct: 575 SPVLVVDFASLYPSIIQAHNLCYSTL---ITPGEESR------------LRDLRPGEDYE 619
Query: 1335 ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLAL 1394
+ +V + K L LLE L+ R +K+ + +Q I + +QLA+
Sbjct: 620 SFALSGGTFHFVKKHIHKSFLASLLESWLAKRKAIKRLLAACEDPRQ--RTILDKQQLAI 677
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE 1439
K N YG+T G PC +A+++ GR+ LE+A +FV +
Sbjct: 678 KCTCNAVYGFTGVA-HGLFPCLTIAETVTLQGRTMLERAKAFVEK 721
>gi|323716876|gb|ADY05314.1| DNA polymerase [Semnopithecus entellus lymphocryptovirus 1]
Length = 751
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 221/463 (47%), Gaps = 65/463 (14%)
Query: 990 NDSDHAVEIYVLLYCKSES---HQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCS 1040
N++D ++I +L+ ++ ++R L+ + C+ ++ E+ + F +++
Sbjct: 310 NEADLILQISCVLWSTGDAAGRYRRILLTLGTCEEIEGVEIYEFPSELDMLYAFFQLIRD 369
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNM 1099
+ +I+ G+++ ++ +RA H+ GI A +I + G+ +
Sbjct: 370 LNVEIVTGYNVANFDWPYILDRARHIYGIN--------------PASLGKIRQGGVCEVR 415
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
L A + + G + ++++ + R ++ L+ Y ++ VA+
Sbjct: 416 RPHDAGKGFLRANTKV-------------RITGLVPIDMYAVCRDKLSLSDYKLDTVAQY 462
Query: 1160 VLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVF 1219
+L + + ++ + + FA GP R R Y V + L ++++N + +E+A++
Sbjct: 463 LLGARKEDVHYKEIPRLFAQGP-EGRRRLGIYCVQDSALVMDLLNHFVIHVEVAEIAKIA 521
Query: 1220 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG-NHQVASQPAMECLPLVMEPESGFY 1278
I VL G Q RV S LL A +N++ P + + Q A V++P SGFY
Sbjct: 522 HIPCRRVLDDGQQIRVFSCLLAAAQKENFILPMPSPSDRDGYQGAT-----VIQPLSGFY 576
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRP--DLHVLRDLKDEL 1336
PV+V+DF SLYPS++ A+NLC+ T I P +E+ L + RP D R
Sbjct: 577 NSPVLVVDFASLYPSIIQAHNLCYST---MITPGEEHRL--AGLRPGEDYETFRLT---- 627
Query: 1337 LIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK-LAPSQQILHR-IFNARQLAL 1394
GV + V+K V L +L++ + ++AIKK LA S+ R I + +QLA+
Sbjct: 628 ----GGVYHF---VKKHVHESFLASLLTSWLAKRKAIKKLLAASEDPGQRTILDKQQLAI 680
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
K N YG+T +G PC +A+++ GRS LE+A +FV
Sbjct: 681 KCTCNAVYGFTGVA-NGLFPCLSIAETVTLQGRSMLERAKAFV 722
>gi|157061824|gb|ABV03812.1| DNA polymerase [Papio hamadryas lymphocryptovirus 3]
Length = 751
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 229/496 (46%), Gaps = 77/496 (15%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S +A E N++D ++I +L+ E ++R
Sbjct: 276 GDLSVRREDSSWPSYTALAFDIECLGEEGFPTATNEADLILQISCVLWSTGEESGRYRRI 335
Query: 1013 LVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C+ V+ E+ + F +++ +I+ G+++ ++ +RA H+
Sbjct: 336 LLTLGTCEEIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHI 395
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
I+ L A G E+ R D + L + +
Sbjct: 396 -----YGINPASLGKIRAGGVCEV--RRPHD-------AGKGFLRAN------------T 429
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ + G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + FA+GP R
Sbjct: 430 KVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFAAGP-EGRK 488
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A +
Sbjct: 489 RLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKE 548
Query: 1247 NYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
N++ P AS V++P SGFY PV+V+DF SLYPS++ A+NLC+ T
Sbjct: 549 NFILPMPA----ASDRDGYQGATVIQPRSGFYNSPVLVVDFASLYPSIIQAHNLCYST-- 602
Query: 1307 GKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTR 1366
I P +E+ L + RP D + L G+ + V+K V L +L++
Sbjct: 603 -MIPPGEEHRL--AGLRPG----EDYESFRLT--GGIYHF---VKKHVHESFLASLLTSW 650
Query: 1367 IMVKQAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADS 1421
+ ++AIKKL P Q+ I + +QLA+K N YG+T +G PC +A++
Sbjct: 651 LAKRKAIKKLLAACEDPRQKT---ILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAET 706
Query: 1422 IVQCGRSTLEKAISFV 1437
+ GR+ LE+A +FV
Sbjct: 707 VTLQGRTMLERAKAFV 722
>gi|348690058|gb|EGZ29872.1| hypothetical protein PHYSODRAFT_468044 [Phytophthora sojae]
Length = 1248
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
Query: 1283 VVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNG 1342
L+ Q L +I + P E +LGV + P L KD+++I PNG
Sbjct: 904 ATLNLQILSKMQLITRTSLLGRLKDGLNPELEASLGVIDYSPSASGLLQCKDDIIIAPNG 963
Query: 1343 VMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP-SQQILHRIFNARQLALKLIANVT 1401
++ P R GVLP +L+EILSTRIMVK+++K +Q+ L ++ NARQLALK+I+NVT
Sbjct: 964 ALFCPKSHRHGVLPLILDEILSTRIMVKKSMKTAKECNQERLEKVLNARQLALKMISNVT 1023
Query: 1402 YGYTAAGFSGRMPCAELADSIVQ 1424
YGYTAAGFSGRMPCA+LAD+IVQ
Sbjct: 1024 YGYTAAGFSGRMPCAQLADAIVQ 1046
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 131/265 (49%), Gaps = 40/265 (15%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFEND---SDHAVEIYVLLYCKSESHQRSL 1013
+T+LSIE+ A SRG + P+P +D +NV+ A E ++ + L+ K E +++
Sbjct: 699 VTILSIEIFAASRGSMLPNPLHDPVNVICYAVEAQEGPTNSKTQERGFLFWKPEDMEQT- 757
Query: 1014 VGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLND 1073
+ + V S EI + + S + D+ R+ + L+
Sbjct: 758 -ALSSAGLCVDSSEISVS------IASDERDLF---------------RSLEALVNLIQT 795
Query: 1074 ISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
+SR PL + I R +T E +S K+A I WG A+GL + GR
Sbjct: 796 LSRLPL--------APIDPRNVTTVPDQE---GDS--QKEASIGTTWGVNKAAGLWLHGR 842
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+LN+WR+ R E+KL+ Y +E V VL+R P LT WF G G+ R++ + Y +
Sbjct: 843 YILNLWRMTRSELKLSRYALEDVVWAVLKRTYPVYSADQLTTWFREG-GQMRWKVIRYFL 901
Query: 1194 GRAKLNLEIMNQLDMINRTSELARV 1218
RA LNL+I++++ +I RTS L R+
Sbjct: 902 ERATLNLQILSKMQLITRTSLLGRL 926
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 7 DSNIFSVRIVSIDHYMAPPIPGYDI-------CYSSLQGGKVNEVPVIRVYGSTPAGQKT 59
D V V +D+YM P+P I CY + EVPV+R++G+TPAGQK
Sbjct: 5 DVEDLRVEAVVVDYYMNSPLPAGAIEKLPASPCYL-----RAREVPVVRIFGATPAGQKA 59
Query: 60 CLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLV 119
+H+H PY Y D P ED + A+ L K ++ ++ ++ +
Sbjct: 60 LVHVHGIFPYFYFRAEDDP---DFEDPERLRALLPRLAKDIEAANASKQQQNRQN----- 111
Query: 120 RAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
A ++ S + + DYN+ GM + S +KFR P+P
Sbjct: 112 -NGNSTARYNPSR--------IIAKVFADYNIEGMNSVAFSNVKFRFPLP 152
>gi|313208715|emb|CBH41136.1| DNA polymerase delta, partial [Taenia crassiceps]
Length = 307
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 127/247 (51%), Gaps = 20/247 (8%)
Query: 1214 ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEP 1273
E+ARV G+ +L RG Q +V S LLR A L + Q Q V+EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPGQGDEYMGGTVIEP 64
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK 1333
+ GFY +P+ LDF SLYPS+M+A+NLC T L + + S +L +L
Sbjct: 65 QRGFYNEPIATLDFSSLYPSIMVAHNLCSTTLL------RPEDISASGGISNLLAKYNLG 118
Query: 1334 -DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQL 1392
D+ + P G +V +RKG+LP +LE++L R K+ + +A + R+ + RQL
Sbjct: 119 PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM--VAETDHFKQRVLDGRQL 176
Query: 1393 ALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF------VNENEKWKAK 1446
ALK+ N YG+T A G++PC E++ SI GR +E+ + + K
Sbjct: 177 ALKVSTNSVYGFTGAQV-GKLPCLEISSSISGFGREMIEETKRLLEGRFTIGNGYQSNVK 235
Query: 1447 VIYGDTD 1453
VIYGDTD
Sbjct: 236 VIYGDTD 242
>gi|18071137|gb|AAL58191.1|AF236050_1 DNA polymerase [California sea lion herpesvirus]
Length = 448
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 199/443 (44%), Gaps = 64/443 (14%)
Query: 1008 SHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAE 1061
S++R L+ + C +V+ E+ +F F +L D +I+ G++I + ++ E
Sbjct: 31 SYERMLLTLGTCEPIEGIRVYEFPSELDMFHAFFTLLRDGDVEIITGYNIANFDVPYVLE 90
Query: 1062 RAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML---AEPVVAESLLAKDAIIED 1118
RA T + + AA + + + P VA ++
Sbjct: 91 RA-------------TQVYNMCAANFCRVHSGAVFEVQRVRDGHPGVARAM--------- 128
Query: 1119 EWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA 1178
L +GG + ++++ + R ++ L+ Y + VAE + + + + F
Sbjct: 129 -------PKLRMGGLLAIDMYHICRDKLSLSDYKLNTVAEKCVGTVKDDVSYHEIPTLFR 181
Query: 1179 SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
GP R R R +Y V ++L L+IM E+AR+ I V++ G Q RV S
Sbjct: 182 MGP-RGRARIGKYCVHDSELVLQIMQYFAAHVEVCEIARLAHIPARRVVTDGQQIRVHSC 240
Query: 1239 LLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAY 1298
LL A +NY I P H+ P+ V+ P GFY +PV+V+DF SLYPS++ A+
Sbjct: 241 LLAAARERNY--ILPAPHE-GGGPSGYQGATVISPTVGFYNNPVLVVDFASLYPSIIQAH 297
Query: 1299 NLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK----DELLIPPNGVMYVPPKVRKGV 1354
NLC+ T + DL LK + I + +V + + +
Sbjct: 298 NLCYSTMI---------------LDEDLQHHTHLKPCDYESFNISSGSIHFVKSHICQSL 342
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMP 1414
L LL L+ R V+Q + K Q+ I + +QLA+K+ N YG+T +G MP
Sbjct: 343 LSNLLTVWLTKRKAVRQELAKCTNPQR--RAILDKQQLAIKVTCNSVYGFTGVA-TGIMP 399
Query: 1415 CAELADSIVQCGRSTLEKAISFV 1437
C ++A+++ GR+ LE++ F+
Sbjct: 400 CLKIAETVTLQGRTMLEQSRQFI 422
>gi|156144455|gb|ABU52899.1| DNA polymerase [Elephas maximus gammaherpesvirus 1]
Length = 745
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 189/422 (44%), Gaps = 44/422 (10%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I D +F EI + F ++ +D + L G++I L F+ ++A + L+ S
Sbjct: 342 IEDVGIFEFPSEIDMLYAFFTMIRDYDVEFLTGYNIANFDLPFIIDKATSVYNIDLSQFS 401
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R + + P ++ + + + + G +
Sbjct: 402 RVKTGAMFE---------------VHRPSNGQASFMRSN-----------TKIKIAGLVA 435
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++++ + + ++ L Y + V+E L+ K + ++ + F GP +R + Y V
Sbjct: 436 IDMYPVCKEKLSLTNYKLNTVSEECLKNKKEDVSYKEIPMLFRRGP-ESRQKLGIYCVQD 494
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
+ L ++++ +E+AR+ I V+S G Q RV + LL A+ QNY+ P
Sbjct: 495 SVLVIDLLKYFQTHLEVAEIARLANIPLRKVISDGQQIRVFTCLLEAANQQNYILPEPKE 554
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
V V+ P SGFY PV+V+DF SLYPS++ A+NLC+ T L
Sbjct: 555 LSVDGYQGAT----VIAPISGFYNTPVLVVDFASLYPSIIQAHNLCYSTLL--------- 601
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
T V P L D D + V + P V + +L +LL L+ R ++Q +
Sbjct: 602 TPEVLQCHPGLKPGEDY-DTFHLASGPVHFARPHVAESLLSKLLHGWLAKRKSIRQTLA- 659
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
+ + +L I + +QLA+K+ N YG+T G +PC +A++I GR L+K+ +
Sbjct: 660 -STTDPVLAGILDKQQLAIKVTCNAVYGFTGV-VHGLLPCLSIAETITYQGRQMLDKSKT 717
Query: 1436 FV 1437
FV
Sbjct: 718 FV 719
>gi|323716873|gb|ADY05313.1| DNA polymerase [Macaca fascicularis lymphocryptovirus 1]
Length = 751
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 220/463 (47%), Gaps = 65/463 (14%)
Query: 990 NDSDHAVEIYVLLYCKSES---HQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCS 1040
N++D ++I +L+ E ++R L+ + C+ V+ E+ + F +++
Sbjct: 310 NEADLILQISCVLWSTGEEAGRYRRILLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRD 369
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+I+ G+++ ++ +RA H+ I+ L A G E+ R D
Sbjct: 370 LSVEIVTGYNVANFDWPYVLDRARHI-----YGINPASLGKIRAGGVCEV--RRPHD--- 419
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+ L + + + + G I ++++ + R ++ L+ Y ++ VA +
Sbjct: 420 ----AGKGFLRAN------------TKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHL 463
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L K + ++ + + FA GPG R R Y V + L ++++N + +E+A++
Sbjct: 464 LGAKKEDVHYKEIPRLFAEGPG-GRRRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAH 522
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-GNHQVASQPAMECLPLVMEPESGFYA 1279
I VL G Q RV S LL A +N++ P + + Q A V++P SGFY
Sbjct: 523 IPCRRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT-----VIQPLSGFYN 577
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIP 1339
PV+V+DF SLYPS++ A+NLC+ T I P +E+ L + RP D + L
Sbjct: 578 SPVLVVDFASLYPSIIQAHNLCYST---MITPGEEHRL--AGLRPG----EDYESFRLT- 627
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-----PSQQILHRIFNARQLAL 1394
G + V+K V L +L++ + ++AIKKL P Q+ I + +QLA+
Sbjct: 628 -GGTYHF---VKKHVHESFLASLLTSWLAKRKAIKKLLAACEDPRQKT---ILDKQQLAI 680
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
K N YG+T +G PC +A+++ GR+ LE+A +FV
Sbjct: 681 KCTCNAVYGFTGVA-NGLFPCLSIAETVTLQGRTMLERAKAFV 722
>gi|265509549|gb|ACY75561.1| DNA polymerase [Pongo pygmaeus lymphocryptovirus 2]
Length = 751
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 220/463 (47%), Gaps = 65/463 (14%)
Query: 990 NDSDHAVEIYVLLYCKSES---HQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCS 1040
N++D ++I +L+ E ++R L+ + C+ V+ E+ + F +++
Sbjct: 310 NEADLILQISCVLWSTGEEAGRYRRILLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRD 369
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+I+ G+++ ++ +RA H+ I+ L A G E+ R D
Sbjct: 370 LSVEIVTGYNVANFDWPYVLDRARHI-----YGINPASLGKIRAGGVCEV--RRPHD--- 419
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+ L + + + + G I ++++ + R ++ L+ Y ++ VA +
Sbjct: 420 ----AGKGFLRAN------------TKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHL 463
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L K + ++ + + FA GPG R R Y V + L ++++N + +E+A++
Sbjct: 464 LGAKKEDVHYKEIPRLFAEGPG-GRRRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAH 522
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-GNHQVASQPAMECLPLVMEPESGFYA 1279
I VL G Q RV S LL A +N++ P + + Q A V++P SGFY
Sbjct: 523 IPCRRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT-----VIQPLSGFYN 577
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIP 1339
PV+V+DF SLYPS++ A+NLC+ T I P +E+ L + RP D + L
Sbjct: 578 SPVLVVDFASLYPSIIQAHNLCYST---MITPGEEHRL--AGLRPG----EDYESFRLT- 627
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-----PSQQILHRIFNARQLAL 1394
G + V+K V L +L++ + ++AIKKL P Q+ I + +QLA+
Sbjct: 628 -GGTYHF---VKKHVHESFLASLLTSWLAKRKAIKKLLAACEDPRQKT---ILDKQQLAI 680
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
K N YG+T +G PC +A+++ GR+ LE+A +FV
Sbjct: 681 KCTCNAVYGFTGVA-NGLFPCLSIAETVTLQGRTMLERAKAFV 722
>gi|161610407|gb|AAC57976.3| DNA polymerase [Retroperitoneal fibromatosis-associated herpesvirus]
Length = 1013
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 217/501 (43%), Gaps = 85/501 (16%)
Query: 990 NDSDHAVEIYVLLYCKSES--HQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSF 1041
D D ++I + + E + R L+ + C ++F E + F ++ +
Sbjct: 312 RDGDVILQISCVFHAAGEDAPYTRILLSLGTCDPLDDTEIFEFPSEYDMLVAFFAMIRDY 371
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLA 1101
D D + G++I L ++ RA + L+S I E +
Sbjct: 372 DVDFITGYNIANFDLPYIITRATQ--------VYNIDLKSFTKIKTGSIFE-------VH 416
Query: 1102 EPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
EP + S + + G + ++++++ R ++ L+ Y ++ VA+ L
Sbjct: 417 EPAGGSGGFMRSQ-----------SKVKISGIVPIDMYQVCREKLSLSDYKLDTVAKKCL 465
Query: 1162 RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
++ I +R + F SG R + Y V + L ++++ +E+AR+ I
Sbjct: 466 GKQKDDISYRDIPPLFRSGAA-GRAKIGRYCVIDSVLVMDLLRMFQTHVEIAEIARLAKI 524
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-----GNHQVASQPAMECLPLVMEPESG 1276
VL+ G Q RV S LL A + Y+ P G +Q A+ V+ P G
Sbjct: 525 PARRVLTDGQQIRVFSCLLEAASQEGYILPVPNGDTTGGYQGAT---------VINPIPG 575
Query: 1277 FYADPVVVLDFQSLYPSMMIAYNLCFCTCL--GKILPSKENTLGVSSFRPDLHVLRDLKD 1334
FY DPV+V+DF SLYPS+M A+NLC+ T + IL E T P+ + +
Sbjct: 576 FYDDPVLVVDFASLYPSIMQAHNLCYSTLIQGNAILSHPELT-------PNDY------E 622
Query: 1335 ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP-SQQILHRIFNARQLA 1393
+ V +V VR+ +L +LL L+ R K+ K LA + I + +QLA
Sbjct: 623 TFHLSGGPVHFVKKHVRESLLSKLLTTWLTKR---KEIRKNLASCGDPTMRTILDKQQLA 679
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV---------------- 1437
+K+ N YG+T SG +PC +A+++ GR LE + +FV
Sbjct: 680 IKVTCNAVYGFTGVA-SGILPCLNIAETVTLQGRKMLETSQAFVEGISPKDLSDLIQRPI 738
Query: 1438 NENEKWKAKVIYGDTDRYTVC 1458
+ + + KVIYGDTD VC
Sbjct: 739 DASPDARFKVIYGDTDSLFVC 759
>gi|301119837|ref|XP_002907646.1| DNA polymerase zeta catalytic subunit, putative [Phytophthora
infestans T30-4]
gi|262106158|gb|EEY64210.1| DNA polymerase zeta catalytic subunit, putative [Phytophthora
infestans T30-4]
Length = 1223
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
Query: 1283 VVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNG 1342
L+ Q L +I + P E +LGV F P+ L + +++I PNG
Sbjct: 908 ATLNLQILSKMQLITRTSFLGRLKDGLNPELETSLGVIDFTPNTTGLLQCRGDVIIAPNG 967
Query: 1343 VMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPS-QQILHRIFNARQLALKLIANVT 1401
++ P R GVLP +L+EILSTRIMVK+++K S Q+ L ++ NARQLALK+I+NVT
Sbjct: 968 TLFCPKSHRHGVLPLILDEILSTRIMVKKSMKSAKDSNQERLEKVLNARQLALKMISNVT 1027
Query: 1402 YGYTAAGFSGRMPCAELADSIVQ 1424
YGYTAAGFSGRMPCA+LAD+IVQ
Sbjct: 1028 YGYTAAGFSGRMPCAQLADAIVQ 1050
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 128/272 (47%), Gaps = 54/272 (19%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSINVVALAFENDSD----HAVEIYVLLYCKSESHQRS 1012
+T+LS+E+ AESRG++ P+P YD ++V+ A E E L+ + + +
Sbjct: 703 ITILSLEIFAESRGNMLPNPLYDPVSVICYAVEAQEGPTEFKTKERGFLMLKPDDMEEAT 762
Query: 1013 LVGI------PDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L G+ D VF+ S E L H +K L
Sbjct: 763 LKGVGLCVDSSDISVFIASDERELL-HSLKAL---------------------------- 793
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
I L+ +SR P + I R T E +S K+A I +WG A+
Sbjct: 794 -IQLIQSLSRLP--------SAPIDPRNTTTVPDQE---GDS--QKEASIGTKWGVNKAA 839
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
GL + GR +LN+WR+ R E+KL+ Y +E V VL+R P LT WF G G+ R+
Sbjct: 840 GLWLHGRYILNLWRMTRSELKLSRYALEDVVWAVLKRTYPVYSAEKLTSWFQEG-GQTRW 898
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARV 1218
+ + Y + RA LNL+I++++ +I RTS L R+
Sbjct: 899 KVIRYYLERATLNLQILSKMQLITRTSFLGRL 930
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 29/170 (17%)
Query: 7 DSNIFSVRIVSIDHYMAPPIPGYDI-------CYSSLQGGKVNEVPVIRVYGSTPAGQKT 59
D V V +D+YM+ P+P + CY + EVPVIR++G+TPAGQK
Sbjct: 5 DEEELRVEAVVVDYYMSSPLPADSVKKIPASPCYL-----RAREVPVIRIFGATPAGQKA 59
Query: 60 CLHIHRALPYLYVPCADIPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQHVHECSLV 119
+H+H PY Y D P ED + + L K ++ ++ K++ + +
Sbjct: 60 LVHVHGIFPYFYFRTEDDP---DFEDAERLRTLLPRLAKDIEAANASKQKQRQQNNGN-- 114
Query: 120 RAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFRHPVP 169
A F+ S + + DYN+ GM ++ LS +KFR P+P
Sbjct: 115 ----ATARFNPSR--------IIAKVFADYNIEGMNYVALSNVKFRFPLP 152
>gi|27371127|gb|AAH35823.1| Similar to REV3-like, catalytic subunit of DNA polymerase zeta
RAD54 like (S. cerevisiae), partial [Homo sapiens]
Length = 608
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 35/187 (18%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FSVRIV+ D+YMA P+ G D C S L V +VPV+RV+G+TPAGQKTCLH+H PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKVK-GSAGSKRQHVHECSLVRAK------ 122
LYVP Q+ + Y+ ++ ++++AL V G+ S QHV + SLV
Sbjct: 61 LYVPYDGYG----QQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 123 ------------------------KGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++
Sbjct: 117 EKERHFMKIYLYNPTMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 159 LSKLKFR 165
L+ +KFR
Sbjct: 177 LAAVKFR 183
>gi|323471676|gb|AAW55917.2| DNA polymerase [Cercopithecus neglectus lymphocryptovirus 1]
Length = 751
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 229/497 (46%), Gaps = 79/497 (15%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S +A E N++D ++I +L+ E ++R
Sbjct: 276 GDLSVRREDSSWPSYTALAFDIECLGEEGFPTATNEADLILQISCVLWSTGEEAGRYRRI 335
Query: 1013 LVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C+ V+ E+ + F +++ +I+ G+ + ++ +RA H+
Sbjct: 336 LLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYSVANFDWPYVLDRARHI 395
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
I+ L A G E+ R D + L + +
Sbjct: 396 -----YGINPASLGKIRAGGVCEV--RRPHD-------AGKGFLRAN------------T 429
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ + G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + FA GPG R
Sbjct: 430 KVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFAEGPG-GRR 488
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A +
Sbjct: 489 RLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKE 548
Query: 1247 NYLAISP-GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
N++ P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T
Sbjct: 549 NFILPMPSASDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST- 602
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
I P +E+ L + RP D + L G + V+K V L +L++
Sbjct: 603 --MITPGEEHRL--AGLRPG----EDYESFRLT--GGTYHF---VKKHVHESFLASLLTS 649
Query: 1366 RIMVKQAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
+ ++AIKKL P Q+ I + +QLA+K N YG+T +G PC +A+
Sbjct: 650 WLAKRKAIKKLLAACEDPRQKT---ILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAE 705
Query: 1421 SIVQCGRSTLEKAISFV 1437
++ GR+ LE+A +FV
Sbjct: 706 TVTLQGRTMLERAKAFV 722
>gi|52551098|gb|AAU84534.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
Length = 1151
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 128/530 (24%), Positives = 208/530 (39%), Gaps = 114/530 (21%)
Query: 989 ENDSDHAVEIYVLLYCKSESHQ--RSLVGIPDCK----------VFVCSKEIHLFSHFIK 1036
+N D ++I ++ C ++ R L + C+ V C E L F
Sbjct: 335 DNSCDVVIQISTIVRCLKTGNEEGRLLFSLGSCRLPAETAGSATVIECDSEYELLLAFFT 394
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGIT 1096
F P+ L G++I G L FL +AA + L + R + D +SE
Sbjct: 395 FFKQFSPEYLSGYNILGFDLPFLVNKAAAYDLKL-DGYGRLERGGQFRVID--LSENRFQ 451
Query: 1097 DNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAV 1156
N+ + + G + L+V+ L+RG++ L Y ++ V
Sbjct: 452 KNI---------------------------KVRINGTVTLDVYPLLRGKLSLPNYKLDTV 484
Query: 1157 AETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELA 1216
VL + ++ + + GP R +Y + + L + + SE+A
Sbjct: 485 CREVLGETKRDVSYKEIPTLYGQGP-EGRGLLGDYCLQDSALVCRLFEKFAPHVEMSEVA 543
Query: 1217 RVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA-----------ISPGNHQVASQPAME 1265
++ + +++ G Q RV + LL+ A Y+ P P
Sbjct: 544 KLAHLPMNRIMTDGQQIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDRGPSLKGPEEG 603
Query: 1266 CL------------------PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
V+EPE+GFY DPV V DF SLYPS++ A+NLCF T
Sbjct: 604 TEEENETENGAYTGDKGYQGATVLEPETGFYVDPVTVFDFASLYPSIIQAHNLCFTTLTR 663
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
+ KE G + +E + + YV P VR+ +L LL + L+ R
Sbjct: 664 RTETLKELKAG------------EDYEEFKVQGMSLYYVKPHVRRSLLGELLTDWLALRK 711
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
++ ++K APS Q L + + +QLA+KL N YG+T +G +PC E+A ++ GR
Sbjct: 712 KIRASMKT-APSDQRL--LLDKQQLAIKLTCNSVYGFTGVA-TGFLPCLEVAATVTTVGR 767
Query: 1428 STLEKAISFVNENEKWKA------------------------KVIYGDTD 1453
L F+ + +W +VIYGDTD
Sbjct: 768 DMLLATRDFI--HTRWGTDFEALLVDAPELAAFRRPESLFGLRVIYGDTD 815
>gi|360086542|ref|YP_004940227.1| UL54 gene product [Saimiriine herpesvirus 3]
gi|359832279|gb|AEV80915.1| DNA polymerase catalytic subunit [Saimiriine herpesvirus 3]
Length = 1024
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 187/377 (49%), Gaps = 51/377 (13%)
Query: 1110 LAKDA--IIEDEWGRTHASG----LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRR 1163
L++D ++ G+T+ S + + G +V++++ + + Y + +AE L++
Sbjct: 400 LSRDGKFFVQSSQGKTYISTSQTKVVISGTVVIDMYPVCMAKTSAQNYKLNTMAELYLKQ 459
Query: 1164 KIPSIPFR-VLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGID 1222
+ + ++ + K+ A+ GRA +Y V A L ++ N ++ +AR+ I
Sbjct: 460 QKDDLSYKDIPVKFLANEVGRAVVG--KYCVQDALLVKDLFNVINFHYEAGAVARLAKIA 517
Query: 1223 FFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPV 1282
V+S G Q R+ + LL +N + + N + + V EPE G+Y DPV
Sbjct: 518 MRRVVSDGQQVRIYTSLLDECSCRNLILPTYKNSGLGDDVTYQG-ATVFEPEVGYYNDPV 576
Query: 1283 VVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNG 1342
+V DF SLYPS+++A+NLC+ T I+ + E P+ + ++K E NG
Sbjct: 577 LVFDFASLYPSIIMAHNLCYSTL---IMDNGEC--------PEADKIYEVKFE-----NG 620
Query: 1343 VMY--VPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-PSQQILHRIFNARQLALKLIAN 1399
+Y V P+VR VL LL + ++ R V++A+K A P ++ L + QLALK+ N
Sbjct: 621 TVYRFVKPEVRPSVLSELLTKWVAQRKAVREAMKDCADPLKRTL---LDKEQLALKVTCN 677
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN-------------EKW--- 1443
YG+T +G +PC +A SI + GR L+ F+++N E +
Sbjct: 678 SFYGFTGVA-NGMLPCLPVAASITRIGRGMLQDTARFIHDNFASPDFLKTFFNEEDYVEG 736
Query: 1444 --KAKVIYGDTDRYTVC 1458
+AKVIYGDTD VC
Sbjct: 737 GVEAKVIYGDTDSVFVC 753
>gi|323482723|gb|AAQ10659.2| DNA polymerase [Colobus guereza lymphocryptovirus 1]
Length = 751
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 229/492 (46%), Gaps = 76/492 (15%)
Query: 972 LRPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRSLVGIP 1017
LR D + S +A E N++D ++I +L+ + ++R L+ +
Sbjct: 281 LREDSSWPSYTALAFDIECLGEEGFPTATNEADLILQISCVLWSTGDEAGRYRRILLTLG 340
Query: 1018 DCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
C+ V+ E+ + F +++ +I+ G+++ ++ +RA H+
Sbjct: 341 TCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHI----- 395
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
I+ L A G E+ R D + L + + + V
Sbjct: 396 YGINPASLGKIRAGGVCEV--RRPHD-------AGKGFLRAN------------TKVRVT 434
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + F SGP + R + Y
Sbjct: 435 GLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFVSGP-KGRQKLGMY 493
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
V + L ++++N + +E+A++ I VL G Q RV S LL A +N++
Sbjct: 494 CVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKENFILP 553
Query: 1252 SP-GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T I
Sbjct: 554 MPSASDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST---MIT 605
Query: 1311 PSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
P +E+ L + RP D + L GV + V+K V L +L++ + +
Sbjct: 606 PGEEHRL--AGLRPG----EDYESFKLT--GGVYHF---VKKHVHESFLASLLTSWLARR 654
Query: 1371 QAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
+AIKKL P Q+ I + +QLA+K N YG+T +G PC +A+++
Sbjct: 655 KAIKKLMAACEDPRQKT---ILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAETVTLQ 710
Query: 1426 GRSTLEKAISFV 1437
GR+ LE+A +FV
Sbjct: 711 GRTMLERAKAFV 722
>gi|265509546|gb|ACY75559.1| DNA polymerase [Macaca thibetana lymphocryptovirus 2]
Length = 750
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 228/506 (45%), Gaps = 97/506 (19%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S +A E N++D ++I +L+ E ++R
Sbjct: 275 GDLSVRREDSSWPSYTALAFDIECLGEEGFPTATNEADLILQISCVLWSTGEEAGRYRRI 334
Query: 1013 LVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C+ V+ E+ + F +++ +I+ G+++ ++ +RA H+
Sbjct: 335 LLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHI 394
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
IS L A G E+ R H +
Sbjct: 395 -----YGISPASLGKIRAGGVCEVR------------------------------RPHDA 419
Query: 1127 G---------LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
G + + G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + F
Sbjct: 420 GKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLF 479
Query: 1178 ASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVES 1237
A+GP R + Y V + L ++++N + +E+A++ I VL G Q RV S
Sbjct: 480 AAGPA-GRRKLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFS 538
Query: 1238 MLLRLAHTQNYLAISP-GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMI 1296
LL A +N++ P + + Q A V++P SGFY PV+V+DF SLYPS++
Sbjct: 539 CLLAAAQKENFILPMPSASDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQ 593
Query: 1297 AYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLP 1356
A+NLC+ T I P +E+ L + RP D + L G + V+K V
Sbjct: 594 AHNLCYST---MITPGEEHRL--AGLRPG----EDYESFRLT--GGTYHF---VKKHVHE 639
Query: 1357 RLLEEILSTRIMVKQAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSG 1411
L +L++ + ++AIKKL P Q+ I + +QLA+K N YG+T +G
Sbjct: 640 SFLASLLTSWLAKRKAIKKLLAACEDPRQKT---ILDKQQLAIKCTCNAVYGFTGVA-NG 695
Query: 1412 RMPCAELADSIVQCGRSTLEKAISFV 1437
PC +A+++ GR+ LE+A +FV
Sbjct: 696 LFPCLSIAETVTLQGRTMLERAKAFV 721
>gi|171855273|gb|AAO46907.2| DNA polymerase [Babyrousa babyrussa rhadinovirus 1]
Length = 743
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 212/468 (45%), Gaps = 79/468 (16%)
Query: 991 DSDHAVEIYVLLYCKS-ESHQRSLV-------GIPDCKVFVCSKEIHLFSHFIKILCSFD 1042
D D ++I +L+ + ++H R+++ I D V+ E+ +F F ++ +
Sbjct: 308 DEDMVIQISCILWTVTHDTHVRNILLTLGSCDPIKDTDVYEFPSELDMFFAFFTLIRDMN 367
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
D + G++I ++ +RA + L ++
Sbjct: 368 IDFVTGYNIANFDFPYIIDRATQVYNFQLKQFTK-------------------------- 401
Query: 1103 PVVAESLLAKDAIIEDEWGRTHA-SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
V++ S I G A S + + G + ++++ + + ++ L+ Y + VAE +
Sbjct: 402 -VISGSTFEVQKPINTGAGFMRAFSKIKITGLVPIDMYNVCKDKLSLSDYKLNTVAEHCM 460
Query: 1162 RRKIPSIPFRVLTKWFASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
+ + ++ + F SGP GRAR Y V + L ++++ SE+A++
Sbjct: 461 GSQKDDVTYKEIPPLFRSGPTGRARVG--NYCVLDSILVMDLLKYFMTHIEISEIAKLAK 518
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-----GNHQVASQPAMECLPLVMEPES 1275
I VL+ G Q RV S LL A +NY+ P G +Q A+ V++P
Sbjct: 519 IPTRRVLTDGQQIRVFSCLLEAAKEENYILPIPMTRGSGGYQGAT---------VIDPIP 569
Query: 1276 GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK-- 1333
GFY PV+V+DF SLYPS++ A+NLC+ T + + LH+ DLK
Sbjct: 570 GFYNTPVLVVDFASLYPSIIQAHNLCYSTLI---------------YDHKLHLHPDLKPG 614
Query: 1334 --DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKL--APSQQILHRIFNA 1389
D + + +V +L +LL+ L+ R +K+ + P++ IL +
Sbjct: 615 DYDTFHLSSGTIHFVKKHKTMSLLSKLLKIWLAKRKAIKKELAHCEDGPTRNILDK---- 670
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
+QLA+K+ N YG+T SG MPC ++A+++ GR+ LEK+ FV
Sbjct: 671 QQLAIKVTCNSVYGFTGVA-SGIMPCIQIAETVTLQGRTMLEKSKDFV 717
>gi|52493125|gb|AAU81560.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
gi|52493127|gb|AAU81561.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
gi|52493131|gb|AAU81563.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
gi|52493133|gb|AAU81564.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
gi|52493137|gb|AAU81566.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
Length = 673
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 129/536 (24%), Positives = 211/536 (39%), Gaps = 115/536 (21%)
Query: 989 ENDSDHAVEIYVLLYCKSESHQ--RSLVGIPDCK----------VFVCSKEIHLFSHFIK 1036
+N D ++I ++ C ++ R L + C+ V C E L F
Sbjct: 8 DNSCDVVIQISTIVRCLKTGNEEGRLLFSLGSCRLPAETAGSATVIECDSEYELLLAFFT 67
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGIT 1096
F P+ L G++I G L FL +AA + L + R + D +SE
Sbjct: 68 FFKQFSPEYLSGYNILGFDLPFLVNKAAAYDLKL-DGYGRLERGGQFRVID--LSENRFQ 124
Query: 1097 DNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAV 1156
N+ + + G + L+V+ L+RG++ L Y ++ V
Sbjct: 125 KNI---------------------------KVRINGTVTLDVYPLLRGKLSLPNYKLDTV 157
Query: 1157 AETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELA 1216
VL + ++ + + GP R +Y + + L + + SE+A
Sbjct: 158 CREVLGETKRDVSYKEIPTLYGQGP-EGRGLLGDYCLQDSALVCRLFEKFAPHVEMSEVA 216
Query: 1217 RVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA-----------ISPGNHQVASQPAME 1265
++ + +++ G Q RV + LL+ A Y+ P P
Sbjct: 217 KLAHLPMNRIMTDGQQIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDRGPSLKGPEEG 276
Query: 1266 CL------------------PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
V+EPE+GFY DPV V DF SLYPS++ A+NLCF T
Sbjct: 277 TEEENETENGAYTGDKGYQGATVLEPETGFYVDPVTVFDFASLYPSIIQAHNLCFTTLTR 336
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
+ KE G + +E + + YV P VR+ +L LL + L+ R
Sbjct: 337 RTETLKELKAG------------EDYEEFKVQGMSLYYVKPHVRRSLLGELLTDWLALRK 384
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
++ ++K APS Q L + + +QLA+KL N YG+T +G +PC E+A ++ GR
Sbjct: 385 KIRASMKT-APSDQRL--LLDKQQLAIKLTCNSVYGFTGVA-TGFLPCLEVAATVTTVGR 440
Query: 1428 STLEKAISFVNENEKWKA------------------------KVIYGDTDR-YTVC 1458
L F+ + +W +VIYGDTD + +C
Sbjct: 441 DMLLATRDFI--HTRWGTDFEALLVDAPELAAFRRPESLFGLRVIYGDTDSVFVLC 494
>gi|363990259|gb|AEW46233.1| DNA polymerase catalytic subunit [Cebine herpesvirus 1]
Length = 1024
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 179/363 (49%), Gaps = 55/363 (15%)
Query: 1123 THASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR-VLTKWFASGP 1181
T+ S + + G +V++++ + + Y + +AE L+++ + ++ + K+ A+
Sbjct: 419 TNQSKVTISGTVVIDMYPVCMAKTSAPNYKLNTMAELYLKQQKDDLSYKEIPVKFLANEA 478
Query: 1182 GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLL- 1240
GRA +Y V A L ++ N ++ +AR+ I V+S G Q R+ + LL
Sbjct: 479 GRAVVG--KYCVQDAALVKDLFNVINFHYEAGAVARLAKIAMRRVVSDGQQIRIYTSLLD 536
Query: 1241 ----RLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMI 1296
R Y PG +V+ Q A V EPE G+Y DPV+V DF SLYPS+++
Sbjct: 537 ECSCRDMVLPTYRNSEPG-EEVSYQGAT-----VFEPEIGYYNDPVLVFDFASLYPSIIM 590
Query: 1297 AYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMY--VPPKVRKGV 1354
A+NLC+ T I+ + E PD + +++ E NG Y V P+VR V
Sbjct: 591 AHNLCYSTL---IMDNGEC--------PDEEKVYEVRFE-----NGTTYRFVRPEVRSSV 634
Query: 1355 LPRLLEEILSTRIMVKQAIKKLA-PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRM 1413
L LL ++ R V+ A+K P ++ L + QLALK+ N YG+T +G +
Sbjct: 635 LSELLTRWVAQRKAVRAAMKDCTDPLKKTL---LDKEQLALKVTCNSFYGFTGVA-NGML 690
Query: 1414 PCAELADSIVQCGRSTLEKAISFVNEN-------------EKW-----KAKVIYGDTDRY 1455
PC +A SI + GRS L++ F+++N E + +AKVIYGDTD
Sbjct: 691 PCLPVAASITRIGRSMLQETARFIHDNFSAPDFLKTFFNAEDYVEGGVEAKVIYGDTDSV 750
Query: 1456 TVC 1458
VC
Sbjct: 751 FVC 753
>gi|323716885|gb|ADY05317.1| DNA polymerase [Mandrillus sphinx lymphocryptovirus 1]
Length = 751
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 229/493 (46%), Gaps = 78/493 (15%)
Query: 972 LRPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRSLVGIP 1017
LR D + S +A E N++D ++I +L+ + ++R L+ +
Sbjct: 281 LREDSSWPSYTALAFDIECLGEEGFPTATNEADLILQISCVLWSTGDEAGRYRRILLTLG 340
Query: 1018 DCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL-GIGL 1070
C+ V+ E+ + F +++ + +I+ G+++ ++ +RA H+ GI
Sbjct: 341 TCEDIEGVEVYEFPSELDMLYAFFQLIRDLNVEIVTGYNVANFDWPYILDRARHIYGIN- 399
Query: 1071 LNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHV 1130
A +I G+ + V A + + + V
Sbjct: 400 -------------PAALGKIRTGGVCE-------VRRPHDAGKGFLRSN------TKVRV 433
Query: 1131 GGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + F +GP + R +
Sbjct: 434 TGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFVAGP-KGRQKLGM 492
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y V + L ++++N + +E+A++ I VL G Q RV S LL A +N++
Sbjct: 493 YCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKENFIL 552
Query: 1251 ISP-GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKI 1309
P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T I
Sbjct: 553 PMPSASDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST---MI 604
Query: 1310 LPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMV 1369
P +E+ L + RP D + L GV + V+K V L +L++ +
Sbjct: 605 TPGEEHRL--AGLRPS----EDYESFKLT--GGVYHF---VKKHVHESFLASLLTSWLAK 653
Query: 1370 KQAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
++AIKKL P Q+ I + +QLA+K N YG+T +G PC +A+++
Sbjct: 654 RKAIKKLLAACEDPRQKT---ILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAETVTL 709
Query: 1425 CGRSTLEKAISFV 1437
GR+ LE+A +FV
Sbjct: 710 QGRTMLERAKAFV 722
>gi|323716893|gb|ADY05319.1| DNA polymerase [Pongo pygmaeus lymphocryptovirus 1]
Length = 752
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 227/495 (45%), Gaps = 75/495 (15%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S V+A E ND+D ++I +L+ + ++R
Sbjct: 277 GDLSVVREDSTWPSYLVLAFDIECLGEDGFPTATNDADLILQISCVLWSTGDDAGRYRRI 336
Query: 1013 LVGIPDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C +V+ E+ + F +++ +I+ G+++ ++ +RA H
Sbjct: 337 LLTLGTCDEIDGVEVYEFPSELDMLYAFFQLIRDLGVEIVTGYNVANFDWPYILDRARH- 395
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
I LN S KI G V E DA + +
Sbjct: 396 -IYGLNPASL----GKIRVGG-----------------VCEVRRPHDA---GKGFLRSTT 430
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ + G I ++++ + R ++ L+ Y ++ VA+ +L + + ++ + + FA+GP R
Sbjct: 431 KVRITGLIPIDMYAVCRDKLSLSDYKLDTVAKHLLGTRKEDVHYKEIPRLFAAGPA-GRR 489
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A +
Sbjct: 490 RLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKE 549
Query: 1247 NYLAISPG-NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
N++ P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T
Sbjct: 550 NFILPMPAASDRDGYQGAT-----VIQPLSGFYNCPVLVVDFASLYPSIIQAHNLCYSTI 604
Query: 1306 LGKILPSKENTLGVSSFRP--DLHVLRDLKDELLIPPNGVM-YVPPKVRKGVLPRLLEEI 1362
I P +E+ L + RP D R GV +V V + L LL
Sbjct: 605 ---ITPGEEHRL--AGLRPGEDYETFR--------LTGGVFHFVKRHVHESFLASLLTSW 651
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L+ R +K+ + A +Q I + +QLA+K N YG+T +G PC +A+++
Sbjct: 652 LAKRKAIKKMLAACADPRQ--KAILDKQQLAVKCTCNAVYGFTGVA-NGLFPCLSIAETV 708
Query: 1423 VQCGRSTLEKAISFV 1437
GR+ LE+A +FV
Sbjct: 709 TLQGRTMLERAKAFV 723
>gi|18027278|gb|AAL55728.1|AF275657_1 DNA polymerase [Mustelid herpesvirus 1]
Length = 446
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 198/423 (46%), Gaps = 48/423 (11%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
IPD +VF C EI + F+ +L + + + G++I ++ +RA + L D +
Sbjct: 45 IPDTEVFECPSEIDMLYLFLTMLRDLNIEFITGYNIANFDFPYIIDRAVQVFNFNLKDFT 104
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
R S + S G M A S + + G +
Sbjct: 105 RIKNSSMFEVHTPQNSSAGF---MRA-----------------------VSKIKISGFVC 138
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP-GRARYRCVEYVVG 1194
++++ + + ++ L+ Y + VA+ + + + ++ + F +GP GRA+ Y V
Sbjct: 139 IDMYNVCKEKLSLSNYKLNTVAKQCIGGQKEDVSYKDIPHLFRAGPAGRAKLGV--YCVK 196
Query: 1195 RAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG 1254
+++ L+++ SE+A++ I VL+ G Q RV S LL +A QNY I P
Sbjct: 197 DSEIVLQLLRYFMTHIEISEIAKIAKIPTRRVLTDGQQIRVFSCLLDVAKDQNY--ILPQ 254
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ S V++P GFY P++V+DF SLYP+++ A NLC+ T ++P ++
Sbjct: 255 KDRGDSDGYQGAT--VIDPIPGFYNTPILVVDFASLYPTIIQANNLCYST----MIPHEK 308
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
L + + P + +L V +V + +L LL+ LS R +K+ ++
Sbjct: 309 --LHIYNISPHDYQTFNLSS------GPVHFVKKHKQVSLLATLLDAWLSKRRAIKKTLQ 360
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
+ L I + +QLA+K+ N YG+T SG +PC ++A++I GR LEK+
Sbjct: 361 SVTDPN--LRTILDKQQLAIKVTCNAVYGFTGVS-SGILPCLKIAETITYEGRRMLEKSK 417
Query: 1435 SFV 1437
+F+
Sbjct: 418 NFI 420
>gi|323482737|gb|AAP41946.2| DNA polymerase [Erythrocebus patas lymphocryptovirus 1]
Length = 751
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 227/491 (46%), Gaps = 74/491 (15%)
Query: 972 LRPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRSLVGIP 1017
LR D + S +A E N++D ++I +L+ + ++R L+ +
Sbjct: 281 LREDSSWPSYTALAFDIECLGEEGFPTATNEADLILQISCVLWSTGDEAGRYRRILLTLG 340
Query: 1018 DCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
C+ V+ E+ + F +++ +I+ G+++ ++ +RA H+
Sbjct: 341 TCEDIEGVEVYEFPSELDMIYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHI----- 395
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
I+ L A G E+ R D + L + + + +
Sbjct: 396 YGINPASLGKIRAGGVCEV--RRPHD-------AGKGFLRAN------------TKVRIT 434
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + F +GP + R + Y
Sbjct: 435 GLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFVAGP-KGRQKLGMY 493
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
V + L ++++N + +E+A++ I VL G Q RV S LL A +N++
Sbjct: 494 CVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKENFILP 553
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P AS V++P SGFY PV+V+DF SLYPS++ A+NLC+ T I P
Sbjct: 554 MPA----ASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST---MITP 606
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
+E+ L + RP D + L GV + V+K V L +L++ + ++
Sbjct: 607 GEEHRL--AGLRPG----EDYESFKLT--GGVYHF---VKKHVHESFLASLLTSWLAKRK 655
Query: 1372 AIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
AIKKL P Q+ I + +QLA+K N YG+T +G PC +A+++ G
Sbjct: 656 AIKKLLAACEDPRQKT---ILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAETVTLQG 711
Query: 1427 RSTLEKAISFV 1437
R+ LE+A +FV
Sbjct: 712 RTMLERAKAFV 722
>gi|156254718|gb|AAQ10669.2| DNA polymerase [Papio hamadryas lymphocryptovirus 2]
Length = 751
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 232/497 (46%), Gaps = 79/497 (15%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S +A E N++D ++I +L+ E ++R
Sbjct: 276 GDLSVRREDSSWPSYTALAFDIECLGEEGFPTATNEADLILQISCVLWSTGEEAGRYRRI 335
Query: 1013 LVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C+ V+ E+ + F +++ +I+ G+++ ++ +RA H+
Sbjct: 336 LLTLGTCEEIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHI 395
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
I+ L KI AG V E DA + R + +
Sbjct: 396 -----YGINPASL-GKIRAGG-----------------VCEVRRPHDA--GKGFMRAN-T 429
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ + G I ++++ + R ++ L+ Y ++ VA +L K + ++ + + FA+GP R
Sbjct: 430 KVRITGLIPIDMYAVCREKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFAAGP-EGRK 488
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A +
Sbjct: 489 RLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKE 548
Query: 1247 NYLAISP-GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
++ P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T
Sbjct: 549 KFILPMPSASDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST- 602
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
I P +E+ L + RP D + L G+ + V+K V L +L++
Sbjct: 603 --MITPGEEHRL--AGLRPG----EDYESFRLT--GGIYHF---VKKHVHESFLASLLTS 649
Query: 1366 RIMVKQAIKKLA-----PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
+ ++AIKKL P Q+ I + +QLA+K N YG+T +G PC +A+
Sbjct: 650 WLAKRKAIKKLLAACEDPRQKT---ILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAE 705
Query: 1421 SIVQCGRSTLEKAISFV 1437
++ GR+ LE+A +FV
Sbjct: 706 TVTLQGRTMLERAKAFV 722
>gi|258649651|gb|ACV86607.1| DNA-dependent DNA polymerase [Phocid herpesvirus 2]
Length = 436
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 210/464 (45%), Gaps = 67/464 (14%)
Query: 991 DSDHAVEIYVLLY-CKSESHQRSLVG-------IPDCKVFVCSKEIHLFSHFIKILCSFD 1042
D D ++I +L+ SE+ R ++ IPD +VF C E+ +F F +L F+
Sbjct: 1 DDDMVLQISCVLWNTGSETPPRKMLFTLGTCDPIPDTEVFECPSEVDMFYLFFSMLRDFN 60
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
+ + G++I +L +RA + L + +R S + S G M A
Sbjct: 61 IEFITGYNIANFDFPYLIDRATQVFNFNLKEFTRVKSSSMFEIHTPQNSSAGF---MRA- 116
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
S + + G + ++++ + + ++ L+ Y + VA+ +
Sbjct: 117 ----------------------VSKMKISGFVCIDMYHVCKDKLSLSNYKLNTVAQQCIG 154
Query: 1163 RKIPSIPFRVLTKWFASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
+ + ++ + F GP GRA+ Y V +++ L ++ SE+A++ I
Sbjct: 155 GQKEDVSYKEIPYLFREGPKGRAKLGI--YCVKDSEIVLNLLKFFMTHIEISEIAKIAKI 212
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNY-LAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
VL+ G Q RV S LL +A QNY L I Q A V+ P GFY
Sbjct: 213 PARRVLTDGQQIRVFSCLLDVARQQNYILPIKSDKSLDGYQGAT-----VINPIPGFYNT 267
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDE----L 1336
PV+V+DF SLYP+++ A NLC+ T ++P + LH+ DL E
Sbjct: 268 PVLVVDFASLYPTIIQANNLCYST----MIPDDK-----------LHLHTDLTPEDYQTF 312
Query: 1337 LIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-PSQQILHRIFNARQLALK 1395
+ V +V +L LL LS R +++ ++ ++ PS L I + +QLA+K
Sbjct: 313 NLSSGPVHFVKRHKHVSLLATLLNVWLSKRKSIRKTLESVSDPS---LRTILDKQQLAIK 369
Query: 1396 LIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE 1439
+ N YG+T SG +PC ++A+++ GR L+++ F+ +
Sbjct: 370 VTCNAVYGFTGVA-SGILPCLKIAETVTFEGRRMLDRSKKFIED 412
>gi|323716882|gb|ADY05316.1| DNA polymerase [Pan troglodytes lymphocryptovirus 1]
Length = 752
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 218/464 (46%), Gaps = 67/464 (14%)
Query: 990 NDSDHAVEIYVLLYCKSES---HQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCS 1040
+++D ++I +L+ E ++R L+ + C+ V+ E+ + F +++
Sbjct: 310 SEADLILQISCVLWSTGEEVGRYRRILLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRD 369
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNM 1099
+I+ G+++ ++ +RA H+ GI A +I G+ +
Sbjct: 370 LSVEIVTGYNVANFDWPYILDRARHIYGIN--------------PASLGKIRSGGVCEVR 415
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
L A + + G + ++++ + R ++ L+ Y ++ VA
Sbjct: 416 RPHDAGKGFLRANTKV-------------RITGLVPIDMYAVCRDKLSLSDYKLDTVARH 462
Query: 1160 VLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVF 1219
+L K + ++ + + FA+GP R R Y V + L ++++N + +E+A++
Sbjct: 463 LLGAKKEDVHYKEIPRLFAAGPA-GRKRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIA 521
Query: 1220 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG-NHQVASQPAMECLPLVMEPESGFY 1278
I VL G Q RV S LL A ++++ P + + Q A V++P SGFY
Sbjct: 522 HIPCRRVLDDGQQIRVFSCLLAAARKEDFILPMPAASDRDGYQGAT-----VIQPLSGFY 576
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLI 1338
PV+V+DF SLYPS++ A+NLC+ T I P +E+ L + RPD D + L
Sbjct: 577 NSPVLVVDFASLYPSIIQAHNLCYST---MITPGEEHRL--AGLRPD----EDYESFRLT 627
Query: 1339 PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-----PSQQILHRIFNARQLA 1393
GV + V+K V L +L++ + ++AIKKL P Q+ I + +QLA
Sbjct: 628 --GGVYHF---VKKHVHESFLSSLLTSWLAKRKAIKKLLAACEDPRQRT---ILDKQQLA 679
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
+K N YG+T +G PC +A+++ GR LE+A +FV
Sbjct: 680 IKCTCNAVYGFTGVA-NGLFPCLSIAETVTLQGRRMLERAKAFV 722
>gi|34395919|gb|AAF63493.2|AF239684_1 polymerase [Green turtle herpesvirus]
Length = 1097
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 215/536 (40%), Gaps = 115/536 (21%)
Query: 989 ENDSDHAVEIYVLLYCKSESHQ--RSLVGIPDCK----------VFVCSKEIHLFSHFIK 1036
+N D ++I +++C ++ R L + C+ V C E L F
Sbjct: 335 DNSCDVVIQISAIVHCLRTGNEEGRLLFSLGSCRLPAEAAGSATVIECDSEYELLLAFFT 394
Query: 1037 ILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGIT 1096
F P+ G++I G L FL +AA + L + R ERG
Sbjct: 395 FFKQFSPEYPSGYNILGFDLPFLVNKAAAYDLKL-DGYGRL--------------ERGGQ 439
Query: 1097 DNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAV 1156
++ ++E+ K+ + + G + L+V+ L+RG++ L Y ++ V
Sbjct: 440 FRIID---LSENRFQKNIKV------------RINGTVTLDVYPLLRGKLSLPDYKLDTV 484
Query: 1157 AETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELA 1216
VL + ++ + + GP R +Y + + L L + + SE+A
Sbjct: 485 CREVLGETKRDVSYKEIPALYGQGP-EGRGLLGDYCLQDSALVLRLFEKFAPHVEMSEVA 543
Query: 1217 RVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP--GNHQVASQPAMECL------- 1267
V++ G Q RV + LL+ A Y+ G + P +
Sbjct: 544 NWRICLMNRVMTDGQQIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDLSPSLNGPEEG 603
Query: 1268 --------------------PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
V+EPE+GFY DPV V DF SLYPS++ A+NLCF T
Sbjct: 604 TEEENETENGAYTGDKGYQGATVLEPETGFYVDPVTVFDFASLYPSIIQAHNLCFTTLTR 663
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRI 1367
+ KE G + +E + + YV P VR+ +L LL + L+ R
Sbjct: 664 RAETLKELKAG------------EDYEEFKVQGMSLFYVKPHVRRSLLGELLTDWLALRK 711
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
++ ++K APS Q L + + +QLA+KL N YG+T +G +PC E+A ++ GR
Sbjct: 712 KIRASMKT-APSDQRL--LLDKQQLAIKLTCNSVYGFTGVA-TGFLPCLEVAATVTTVGR 767
Query: 1428 STLEKAISFVNENEKWKA------------------------KVIYGDTDR-YTVC 1458
L F+ + +W +VIYGDTD + +C
Sbjct: 768 DMLLATRDFI--HTRWGTDFEALLVDAPELAAFRRPESLFGLRVIYGDTDSVFVLC 821
>gi|24943095|ref|NP_733857.1| ORF5 [callitrichine herpesvirus 3]
gi|13676646|gb|AAK38212.1|AF319782_6 ORF5 [callitrichine herpesvirus 3]
Length = 1016
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 216/502 (43%), Gaps = 92/502 (18%)
Query: 990 NDSDHAVEIYVLLYCKSE---SHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCS 1040
N++D ++I +L+ E +++R L+ + C +V+ E+ L F +++
Sbjct: 307 NETDLIIQISCVLWSVGEPTSNYRRILLTVGTCAEIDGVEVYEFPSEMDLIYAFFQLIRD 366
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+ +I+ G+++ ++ +RA H+ I+ L G E+ M
Sbjct: 367 LNVEIITGYNVANFDWPYILDRARHI-----YGINPASLGKIRGGGVCEVRRPNDAGKMF 421
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+ + + + G I ++++ + + ++ L+ Y ++ VA+ +
Sbjct: 422 SRA---------------------CTKIRISGVIPIDMYSVCKEKLSLSDYKLDTVAKRI 460
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L K + ++ + F +GP R R Y + + L ++++N SE+A++
Sbjct: 461 LGTKKEDVHYKEIPHLFRAGP-EERKRLGMYCIQDSVLVMDLLNHFVTHVEISEIAKIAN 519
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-----GNHQVASQPAMECLPLVMEPES 1275
I VL G Q RV S LL A + ++ P +Q A+ V++P +
Sbjct: 520 IPCRRVLDDGQQIRVFSCLLAAAQKEGFILPMPEPSDRDGYQGAT---------VIQPIA 570
Query: 1276 GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK-- 1333
GFY PV+V+DF SLYPS++ A+NLC+ T + P +E LRDL+
Sbjct: 571 GFYNSPVLVVDFASLYPSIIQAHNLCYSTI---VTPGEEGK------------LRDLRPG 615
Query: 1334 ---DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNAR 1390
+ + +V + K L LLE L+ R +++ + +Q I + +
Sbjct: 616 EDYESFSLSGGTFHFVKKHIHKSFLASLLESWLAKRKAIRKLLGACNDPRQ--RTILDKQ 673
Query: 1391 QLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE----------- 1439
QLA+K N YG+T G PC +A+++ GR+ LE+A FV
Sbjct: 674 QLAIKCTCNAVYGFTGVA-HGLFPCLTIAETVTLQGRTMLERAKVFVENLSLTDLEKLAP 732
Query: 1440 --------NEKWKAKVIYGDTD 1453
N +VIYGDTD
Sbjct: 733 CSATPWSFNPDGILRVIYGDTD 754
>gi|196017073|ref|XP_002118383.1| hypothetical protein TRIADDRAFT_34124 [Trichoplax adhaerens]
gi|190579013|gb|EDV19122.1| hypothetical protein TRIADDRAFT_34124 [Trichoplax adhaerens]
Length = 240
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 102/193 (52%), Gaps = 34/193 (17%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+FS RIV+ D Y+A PI D CYS + VPV+R++G+TPAGQKTCLH+H PY
Sbjct: 1 MFSSRIVAADFYLAKPIQKLDACYSDFRRCPTKRVPVVRIFGATPAGQKTCLHVHGVFPY 60
Query: 70 LYVPC-ADIPV-----QLRQEDDGYMH--------------------AISLALEKALKVK 103
LYVP +PV + D +H +A+ + +
Sbjct: 61 LYVPYDGSLPVSKYLLEFANSIDKAIHVATGVKSTDQDTSNMAWQQVVFKIAIVNGMPMY 120
Query: 104 GSAGSKRQ----HVHECSLVRAKK----GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMG 155
G ++Q +++ +LV GA+ +K QPHESHIPF+LQF +DYNLYGM
Sbjct: 121 GYYNEEKQFMKIYLYNPNLVGKVAELLLAGAIMNKVFQPHESHIPFILQFFIDYNLYGMN 180
Query: 156 HLHLSKLKFRHPV 168
+ L+ +KFR P+
Sbjct: 181 LIKLAVVKFRAPL 193
>gi|323716911|gb|ADY05325.1| DNA polymerase [Lophocebus aterrimus lymphocryptovirus 1]
Length = 751
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 232/494 (46%), Gaps = 73/494 (14%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSES---HQRS 1012
GDL R D + S +A E N++D ++I +L+ E ++R
Sbjct: 276 GDLSVXREDSXWPSYTALAFDIECLXEEGFPTATNEADLILQISCVLWSTGEEAGRYRRI 335
Query: 1013 LVGIPDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C +V+ E+ + F +++ +I+ G+++ ++ +RA H
Sbjct: 336 LLTLGTCXXIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARH- 394
Query: 1067 GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHAS 1126
I +N S KI AG V E DA + R + +
Sbjct: 395 -IYGINPASL----GKIRAGG-----------------VCEVRRPHDA--RKGFLRAN-T 429
Query: 1127 GLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARY 1186
+ G I ++++ + R ++ L+ Y ++ VA+ +L K + ++ + + FA+GP R
Sbjct: 430 KVRXTGLIPIDMYAVCRDKMSLSDYKLDTVAKHLLGAKKEDVHYKEIPRLFAAGP-EGRR 488
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A +
Sbjct: 489 RLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQKE 548
Query: 1247 NYLAISP-GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
++ P + + Q A V++P SGFY PV+V+DF SLYPS++ A+NLC+ T
Sbjct: 549 KFILPMPSASDRDGYQGAT-----VIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST- 602
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
I P +E+ L + RP D + L GV + V+K V L +L++
Sbjct: 603 --MITPGEEHRL--TGLRPG----EDYESFRLT--GGVYHF---VKKHVHESFLASLLTS 649
Query: 1366 RIMVKQAIKKLAPSQQILHR--IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIV 1423
+ ++AIKKL + + + I + +QLA+K N YG+T +G PC +A+++
Sbjct: 650 WLAKRKAIKKLLAACEDARQKTILDKQQLAIKCTCNAVYGFTGVA-NGLFPCLSIAETVT 708
Query: 1424 QCGRSTLEKAISFV 1437
GR+ LE+A +FV
Sbjct: 709 LQGRTMLERAKAFV 722
>gi|323716870|gb|ADY05312.1| DNA polymerase [Pan paniscus lymphocryptovirus 1]
Length = 751
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 218/464 (46%), Gaps = 67/464 (14%)
Query: 990 NDSDHAVEIYVLLYCKSES---HQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCS 1040
+++D ++I +L+ E ++R L+ + C+ V+ E+ + F +++
Sbjct: 310 SEADLILQISCVLWSTGEEVGRYRRILLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRD 369
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHL-GIGLLNDISRTPLESKIAAGDSEISERGITDNM 1099
+I+ G+++ ++ +RA H+ GI A +I G+ +
Sbjct: 370 LSVEIVTGYNVANFDWPYILDRARHIYGIN--------------PASLGKIRSGGVCEVR 415
Query: 1100 LAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAET 1159
L A + + G + ++++ + R ++ L+ Y ++ VA
Sbjct: 416 RPHDAGKGFLRANTKV-------------RITGLVPIDMYAVCRDKLSLSDYKLDTVARH 462
Query: 1160 VLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVF 1219
+L K + ++ + + FA+GP R R Y V + L ++++N + +E+A++
Sbjct: 463 LLGAKKEDVHYKEIPRLFAAGP-EGRKRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIA 521
Query: 1220 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG-NHQVASQPAMECLPLVMEPESGFY 1278
I VL G Q RV S LL A ++++ P + + Q A V++P SGFY
Sbjct: 522 HIPCRRVLDDGQQIRVFSCLLAAARKEDFILPMPAASDRDGYQGAT-----VIQPLSGFY 576
Query: 1279 ADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLI 1338
PV+V+DF SLYPS++ A+NLC+ T I P +E+ L + RPD D + L
Sbjct: 577 NSPVLVVDFASLYPSIIQAHNLCYST---MITPGEEHRL--AGLRPD----EDYESFRLT 627
Query: 1339 PPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-----PSQQILHRIFNARQLA 1393
GV + V+K V L +L++ + ++AIKKL P Q+ I + +QLA
Sbjct: 628 --GGVYHF---VKKHVHESFLSSLLTSWLAKRKAIKKLLAACEDPRQKT---ILDKQQLA 679
Query: 1394 LKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
+K N YG+T +G PC +A+++ GR LE+A +FV
Sbjct: 680 IKCTCNAVYGFTGVA-NGLFPCLSIAETVTLQGRRMLERAKAFV 722
>gi|172045161|gb|AAP42117.2| DNA polymerase [Hexaprotodon liberiensis gammaherpesvirus 1]
Length = 735
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 212/457 (46%), Gaps = 56/457 (12%)
Query: 991 DSDHAVEIYVLLY-CKSESHQRSLV-------GIPDCKVFVCSKEIHLFSHFIKILCSFD 1042
D D ++I +L+ E Q +++ IP +V+ E+ + F+ +L ++
Sbjct: 299 DEDMVIQISCVLWTVGGEGPQENILLSVGTCHAIPGTRVYEFPSEMDMLYAFLALLRDYE 358
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
+ + G++I ++ +RA+ I G+ ++ G
Sbjct: 359 VEFVTGYNIANFDFPYILDRASS--------------AYNINPGEYTKTKSG-------- 396
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL- 1161
+L A + + R++ + + + G +V++++ + + ++ L+ Y ++ VA L
Sbjct: 397 -----ALFAVHKPKDGNFMRSN-TKVKLSGTVVIDMYMVCKEKLSLSNYKLDTVARECLG 450
Query: 1162 -RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
++K + +R + F G R R Y V + L ++++ SE+A++
Sbjct: 451 DQKKKEDVSYREIPGLFKGSAG-GRARIGVYCVQDSLLVMDLLRHFMTHVEISEIAKIAN 509
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
I V++ G Q RV S LL A + Y+ P +++ V+ P SGFY
Sbjct: 510 IPTRRVITDGQQIRVFSCLLSTARDRGYILPMPASNKYEGYQGAT----VINPLSGFYNT 565
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
PV+V+DF SLYPS++ A+NLC+ T + G P+L RD D +I
Sbjct: 566 PVLVVDFASLYPSIIQAHNLCYSTLIED---------GDLYRFPELKRGRDY-DTFVISS 615
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
V +V V + +L LL + L+ R ++K+ + + + L I + +QLA+K+ N
Sbjct: 616 GPVHFVKKHVNESLLASLLTDWLAKRKLIKRQLAECRDPK--LRTILDKQQLAIKVTCNA 673
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
YG+T SG +PC ++A+++ GRS LE+ +FV
Sbjct: 674 VYGFTGVA-SGLLPCLKIAETVTLQGRSMLERTKNFV 709
>gi|378706335|gb|AFC35136.1| hypothetical protein OtV6_228 [Ostreococcus tauri virus RT-2011]
Length = 960
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 204/449 (45%), Gaps = 67/449 (14%)
Query: 1019 CKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-------AHLGIGLL 1071
C++ + E + F K L + D DI+ GW+I G + ++ +RA + +G L
Sbjct: 250 CEIRSYATEREMLEAFQKYLHAKDVDIITGWNIFGFDMEYIYKRAQINRCHYSFYNLGKL 309
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
D+ DSE+ + ++ + L + ++ L +
Sbjct: 310 KDV------------DSELVIKKLSSSALGDNLL--------------------KLLPMS 337
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVL-RRKIPSIPFRVLTKWFASGPGRARYRCVE 1190
GR + +++ ++ KL+ Y +++V++ L +KI P + ++ P + R E
Sbjct: 338 GRFIFDLFHEVKKGYKLDSYKLDSVSKLYLGDQKIDMAPKEMFARYKEEDPVKLR-EVAE 396
Query: 1191 YVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLA 1250
Y + L +M +L + E+A+ + ++ RG Q +V S L + A ++
Sbjct: 397 YCIKDTLLPHRLMKKLCTLLNLVEMAKATWVPVPFLVERGQQIKVFSQLTKKARELGFMV 456
Query: 1251 ISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL 1310
+ + +P V+E + G Y P+ LDF++LYPS+M+A+NLC+ + ++
Sbjct: 457 PTIRYGAIPEEPYEGAT--VLEAQKGAYYTPITALDFEALYPSIMMAHNLCYSSY---VM 511
Query: 1311 PSKE--NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIM 1368
K+ N G+ + ++ D GV +LP +L E+ R
Sbjct: 512 DEKKYGNVPGIE------YETFNIGDRTYKFAQGV--------PSLLPAILLELKQFR-- 555
Query: 1369 VKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRS 1428
KQA + +A + + ++N +QLA K+ N YG+T AG G +PC +A + GRS
Sbjct: 556 -KQAKRDMAAATGFMKEVYNGKQLAYKISMNSVYGFTGAG-KGILPCVPIASTTTSKGRS 613
Query: 1429 TLEKAISFVNENEKWKAKVIYGDTDRYTV 1457
+E+ ++V +N AKV YGDTD V
Sbjct: 614 MIEETKNYVEKNFP-GAKVRYGDTDSVMV 641
>gi|171988555|gb|AAD30142.3|AF141887_1 DNA-dependent DNA polymerase [Tapirus terrestris gammaherpesvirus 1]
Length = 763
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 210/458 (45%), Gaps = 57/458 (12%)
Query: 990 NDSDHAVEIYVLLYCKSESHQRSL-------VGIPDCKVFVCSKEIHLFSHFIKILCSFD 1042
+SD ++I +L+ ES + + VGIP+ +++ E + F +L D
Sbjct: 327 RESDLVIQISCVLWPVXESEPKKILLSVGTCVGIPESEIYEFPSEYDMLVGFFTLLRDGD 386
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDS-EISERGITDNMLA 1101
+ + G++I + +L RA + D+S+ K+ G EI +
Sbjct: 387 VEFITGYNIANFDMPYLINRATQI---YNMDVSQY---CKVKXGAFFEIKQ--------- 431
Query: 1102 EPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
+ + R S + + G + ++++ +++ ++ L+ Y ++ VA L
Sbjct: 432 ----------PSSCTRGSFSRAF-SKIKIAGLVAIDMYMVVKDKLSLSDYKLDTVALQCL 480
Query: 1162 RRKIPSIPFRVLTKWFASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
+ ++ + F SGP GRA+ +Y + + L L ++ SE+A++
Sbjct: 481 GAHKEDVSYKEIPTLFRSGPSGRAKIG--KYCLVDSVLVLRLLRYFVTHIEVSEIAKLAR 538
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
+ VL+ G Q RV + LL +A +NY+ P + V+ P SGFY
Sbjct: 539 LPSRCVLTDGQQIRVFTCLLEVARKENYILPVPDKAETEGYQGAS----VISPLSGFYNT 594
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCL-GKILPSKENTLGVSSFRPDLHVLRDLKDELLIP 1339
V+VLDF SLYPS++ A+NLC+ T + ++LP+ PDL L D +
Sbjct: 595 AVLVLDFASLYPSIIQAHNLCYSTMIPHEMLPT----------FPDL--LPGDYDTFKLA 642
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIAN 1399
V +V P K +L RLL L R +++A+ S + I + +QLA+K+ N
Sbjct: 643 SGTVHFVKPHKTKSLLSRLLGAWLDKRKAIRRAMADC--SDESTRTILDKQQLAIKVTCN 700
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
YG+T +G +PC ++A++I GRS LEK ++
Sbjct: 701 SVYGFTGVA-TGILPCIKIAETITFQGRSMLEKTKQYI 737
>gi|294496641|ref|YP_003543134.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
gi|292667640|gb|ADE37489.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
Length = 918
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 206/466 (44%), Gaps = 90/466 (19%)
Query: 1018 DCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRT 1077
D V C E + S F +I +DPD++ G++ + ++ +R + +LN
Sbjct: 229 DTDVETCQDEASMLSRFFEIFREYDPDVVTGYNSNDFDIPYVTDR-----VSILN----- 278
Query: 1078 PLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLN 1137
G IS+ G LA + + + + GR V++
Sbjct: 279 ------KNGHRIISDVGRDGRSLAYRKIGTRTM-----------------VDITGRAVVD 315
Query: 1138 VWRLMRGEVKLNMYTVEAVAETVL-RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
V L+R E L YT+ V+ +L + K+ P + W G Y + Y +
Sbjct: 316 VLPLIRQEFSLKRYTLRNVSHELLGKEKLDVSPQDMEEYW--EDDGAKLYEFINYARRDS 373
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
+L LE++ QL ++++ +++V G V+S G VE +LL QN + S +
Sbjct: 374 ELALELLMQLKLLDKHIAVSQVSGTLLQDVISGGQTNMVEQLLLSEYGKQNRVMSSKPDE 433
Query: 1257 QVASQPAMECLPL----VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPS 1312
+ Q L V+EP G + + V+VLD++SLYP++++A+NLC+ T +
Sbjct: 434 HTSQQRRKLNENLKGGAVLEPHKGLHEN-VLVLDYKSLYPTIIMAHNLCYTTVV------ 486
Query: 1313 KENTLGVSSFRPDLHVLRDLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
E+T +LK D+L+I P G +V P + KG++P +LE++L R KQ
Sbjct: 487 -EDT--------------NLKTDDLIISPTGDKFVKPHLYKGIVPSVLEDLLRRRSETKQ 531
Query: 1372 AIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLE 1431
+KK Q HR+ +A QLALK++ N YGY+ R+ +A S+ GR +
Sbjct: 532 IMKKTRDENQ--HRVLDATQLALKILLNSFYGYSGYA-RARLYSLGMAGSVTSIGRENIA 588
Query: 1432 KAISFV------------------------NENEKWKAKVIYGDTD 1453
+ V ++++K ++YGDTD
Sbjct: 589 RTEEIVCSQIGSVVLRNDEVYFRDEAGEIGSDDKKVNLSIVYGDTD 634
>gi|168804095|ref|YP_001687027.1| DNA polymerase-like protein [Glossina pallidipes salivary gland
hypertrophy virus]
gi|146164283|gb|ABQ08852.1| DNA polymerase-like protein [Glossina pallidipes salivary gland
hypertrophy virus]
Length = 953
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 202/444 (45%), Gaps = 54/444 (12%)
Query: 1024 CSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKI 1083
C E+HL F + + DI+ G++++ L ++ R LG LL ++ K
Sbjct: 269 CKNEVHLLIQFANSINYNNVDIMTGYNMKNFDLMYIYNRMKLLG--LLRHTVNWNMQKK- 325
Query: 1084 AAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMR 1143
+ ++K ++ G + ++ G ++++++ +
Sbjct: 326 -----------------------QLYISKCQKYSNQQGTRDSINTNIFGFVIIDMFEYIS 362
Query: 1144 GEVKLNMYTVEAVAETVLRR--KIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLE 1201
KL Y + V LR K I ++ ++ + G + ++Y A E
Sbjct: 363 SNFKLRSYKLNDVVGVFLRHGEKKLDIDYKNISVFHDRGSKEDCHHLLDYCAVDA----E 418
Query: 1202 IMNQLDMINRTS-----ELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS-PGN 1255
+ N L +INR++ +A + I V+ RG Q R+ SM+ Q+ I
Sbjct: 419 LCNSL-LINRSTYSNVFAVAHICHIPIRYVIDRGQQIRIYSMMCEYIWRQDIYTIPLVTG 477
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKIL--PSK 1313
+V S+ E V+EP+ GFY + LDF SLYPS+MI YN+C+ T + I P
Sbjct: 478 RRVQSKYNYEG-ARVIEPKKGFYNTAIATLDFASLYPSIMIGYNMCYTTLIQGITTPPGH 536
Query: 1314 ENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAI 1373
+++ + + L ++ + V +V R+G+LP +L+ +L +R V++ +
Sbjct: 537 VDSINLVKY-------NGLNCRIVPGTSRVAFVDCSEREGILPSILKVLLQSRAEVRKKM 589
Query: 1374 KKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
K + ++ + ++ QL KL AN YGY AA + ++PC +++ S+ GR L A
Sbjct: 590 KTITDKDEL--ALMDSMQLGFKLCANSAYGYMAAS-TSKLPCIDISSSVTCIGRFLLT-A 645
Query: 1434 ISFVNENEKWKAKVIYGDTDRYTV 1457
I + + EK+K VIYGDTD V
Sbjct: 646 IETICK-EKFKKDVIYGDTDSVMV 668
>gi|387597148|gb|EIJ94768.1| hypothetical protein NEPG_00292 [Nematocida parisii ERTm1]
Length = 568
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 193/423 (45%), Gaps = 48/423 (11%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
+ +LS++++ + P P++D + N VA+ V I +L+C ++
Sbjct: 183 IKILSLDIECIGEDNKFPTPQHDPVVQIGNAVAVY-----PSPVIIEKVLFCTRPTNP-- 235
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
IP +F E + + + + + + +PD+L G++I + +L RA LG+
Sbjct: 236 ---IPGVTIFSFMDEKEMLTAWSQWVSALNPDVLTGYNITQFDMPYLLNRAKALGLTKFK 292
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
SRT ++ G + N A+ + E + G T + L V G
Sbjct: 293 YFSRTDEPAETTQGLFKQDSNNSNKNGDAKNSTSN---------EQKSGFTAPALLVVPG 343
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+V ++ +++ E KL+ Y++ AV+ L + + + + K +G R R Y
Sbjct: 344 RLVFDMLDIVKKEFKLHSYSLNAVSSVFLGEQKEDVHYTQI-KPLYNGTDETRKRLGVYC 402
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY-LAI 1251
+ L + IM ++ ELARV G+ +++RG RV S LLR A NY L +
Sbjct: 403 LKDTYLPIRIMYTKNLFINYCELARVTGVPVEFLVNRGQGIRVLSQLLRQAKKYNYILPV 462
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
G + VMEP GFY++PVVVLD+ SLYPS+++AYNLC+ T L
Sbjct: 463 IIGAEETYEGG------YVMEPNRGFYSNPVVVLDYASLYPSIIMAYNLCYTTLL----- 511
Query: 1312 SKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
SKE + KD+ P G ++ + + G+LP +L +L R Q
Sbjct: 512 SKEQVAHMD------------KDDYTESPTGDYFLRREKKPGLLPVILTSLLEGRKPCVQ 559
Query: 1372 AIK 1374
+++
Sbjct: 560 SLR 562
>gi|323482726|gb|AAQ10665.3| DNA polymerase [Gorilla gorilla lymphocryptovirus 1]
Length = 751
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 217/463 (46%), Gaps = 65/463 (14%)
Query: 990 NDSDHAVEIYVLLYCKSES---HQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCS 1040
+++D ++I +L+ E ++R L+ + C+ V+ E+ + F +++
Sbjct: 310 SEADLILQISCVLWSTGEEAGRYRRILLTLGTCEDIEGVEVYEFPSELDMLYAFFQLIRD 369
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+I+ G+++ ++ +RA H+ I+ L A G E+ R D
Sbjct: 370 LSVEIVTGYNVANFDWPYILDRARHI-----YGINPASLGKIRAGGVCEV--RRPHD--- 419
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+ L + + + + G + ++++ + R ++ L+ Y ++ VA +
Sbjct: 420 ----AGKGFLRAN------------TKVRITGLVPIDMYAVCRDKLSLSDYKLDTVARHL 463
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L K + ++ + + FA+GP R R Y V + L ++++N + +E+A++
Sbjct: 464 LGAKKEDVHYKEIPRLFAAGP-EGRKRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAH 522
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNY-LAISPGNHQVASQPAMECLPLVMEPESGFYA 1279
I VL G Q RV S LL A +N+ L I + + Q A V++P SGFY
Sbjct: 523 IPCRRVLDDGQQIRVFSCLLAAARKENFILPIPAASDRDGYQGAT-----VIQPLSGFYN 577
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIP 1339
PV+V+DF SLYPS++ A+NLC+ T I P +E+ L S D R
Sbjct: 578 CPVLVVDFASLYPSIIQAHNLCYST---MITPGEEHRLAGLSPGEDYESFR--------L 626
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLA-----PSQQILHRIFNARQLAL 1394
GV + V+K V L +L++ + ++AIKKL P Q+ I + +QLA+
Sbjct: 627 TGGVYHF---VKKHVHESFLASLLTSWLAKRKAIKKLLAACEDPRQKT---ILDKQQLAI 680
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
K N YG+T +G PC +A+++ GR LE+A +FV
Sbjct: 681 KCTCNAVYGFTGVA-NGLFPCLSIAETVTLQGRRMLERAKAFV 722
>gi|27452775|gb|AAO12282.1| DNA polymerase [Porcine lymphotropic herpesvirus 2]
Length = 1001
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 222/497 (44%), Gaps = 87/497 (17%)
Query: 991 DSDHAVEIYVLLYC--KSESHQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCSFD 1042
D D ++I +++ + +++ + L+ + C ++ E+ + F ++ +D
Sbjct: 302 DGDMIIQISCIIWTLGQDDNYDKILLSLGTCSPITNTTIYSFPSELDMLYAFCTMIRDYD 361
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
+I+ G++I ++ ERA + + +RT
Sbjct: 362 VEIITGYNIANFDFPYILERANTVYNINPDAYTRTK------------------------ 397
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
+ ++ + E + R++ + + + G +V++++ + + ++ L+ Y + VA+ +
Sbjct: 398 ---SGAIFQVNKPKEGNFLRSN-TKVKLSGLVVIDMYMVCKDKLSLSNYKLNTVAKECIG 453
Query: 1163 RKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGID 1222
K + ++ + F G R R Y + + L ++++ SE+A++ I
Sbjct: 454 EKKEDMSYKEIPALF-KGNANDRARLGLYCIQDSILVMDLLKFFMTHIEISEIAKIANIP 512
Query: 1223 FFSVLSRGSQYRVESMLLRLAHTQNYLAISP--GNHQVASQPAMECLPLVMEPESGFYAD 1280
V++ G Q RV S LL A + Y+ P GN Q Q A V+ P SGFY
Sbjct: 513 MRRVITDGQQIRVFSCLLASAKNRGYILPMPQNGNFQ-GYQGAT-----VIAPLSGFYNT 566
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDE----L 1336
PV+V+DF SLYPS++ A+NLC+ T + DLH LK++
Sbjct: 567 PVLVVDFASLYPSIIQAHNLCYSTLIHN---------------EDLHKYPQLKEDDYETF 611
Query: 1337 LIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKL 1396
LI V +V + + +L LL L+ R M+++ + A + L I + +QLA+K+
Sbjct: 612 LISSGPVHFVKKHISESLLSNLLTTWLAKRKMIRKELTACADPK--LRTILDKQQLAIKV 669
Query: 1397 IANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE--NEKWKA--------- 1445
N YG+T SG +PC ++A++I GR+ LEK FV +E ++
Sbjct: 670 TCNAVYGFTGVA-SGMLPCLKIAETITMQGRAMLEKTKVFVENLSHEDLRSICKVGSIPQ 728
Query: 1446 ---------KVIYGDTD 1453
KVIYGDTD
Sbjct: 729 SSNVFDKPFKVIYGDTD 745
>gi|262285059|gb|ACY41087.1| DNA polymerase catalytic subunit [Wood mouse herpesvirus]
Length = 1026
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 212/473 (44%), Gaps = 70/473 (14%)
Query: 1004 CKSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLG 1057
C + S + L + C +V+ C E L F+ + + + G++I L
Sbjct: 323 CATNSISKLLFSLGTCDPIEGTEVYECPSEYDLLMGFLIFMRDSGVEFIAGYNIANFDLP 382
Query: 1058 FLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIE 1117
++ +RA + +I T + E+ + I+
Sbjct: 383 YIIDRATQI-----YNIDCTQFTKLLTMRTFEVRKP----------------------ID 415
Query: 1118 DEWGRTHA-SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKW 1176
G A + + + G I ++++ + + ++ L+ Y + VA+ L + + ++ +
Sbjct: 416 SGAGFMRAQTKIRISGVIPVDMYTVCKDKLSLSDYKLNTVAKHCLNMEKEDVSYKDIPVL 475
Query: 1177 FASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRV 1235
F GP GRA+ Y V ++L L+++ +E+ ++ I VL+ G Q RV
Sbjct: 476 FKDGPTGRAKIG--TYCVMDSQLVLDLLKYFMAHIEIAEIGKLAKIPVRRVLTDGQQIRV 533
Query: 1236 ESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMM 1295
S LL A +NY I P N S + V++P +GFY PV+V+DF SLYPS++
Sbjct: 534 FSSLLDAARRENY--ILPSNQAKCSNSGYQG-ATVIDPITGFYNTPVLVVDFASLYPSII 590
Query: 1296 IAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRK-GV 1354
A+NLC+ T I+P +N L + P+ L E P+G ++ K RK +
Sbjct: 591 QAHNLCYST----IIP--DNKLQMF---PN---LTPTDYETFTLPSGTVHFVKKHRKCSL 638
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMP 1414
L RLL + L+ R ++ + A I I + +QLA+K+ N YG+T SG +P
Sbjct: 639 LSRLLTKWLAKRKEIRAQLA--ACDDPITKTILDKQQLAIKVTCNSVYGFTGVA-SGMLP 695
Query: 1415 CAELADSIVQCGRSTLEKAISFVNE--------------NEKWKAKVIYGDTD 1453
C ++A++I GR LEK+ +++ N +VIYGDTD
Sbjct: 696 CLQIAETITYQGRKMLEKSRAYIENITSATLGALMHKTYNPDAYFRVIYGDTD 748
>gi|6552720|gb|AAF16522.1|AF191043_1 DNA-dependent DNA polymerase [porcine lymphotropic herpesvirus 2]
gi|27452850|gb|AAO12354.1| DNA polymerase [Porcine lymphotropic herpesvirus 2]
Length = 1001
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 222/497 (44%), Gaps = 87/497 (17%)
Query: 991 DSDHAVEIYVLLYC--KSESHQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCSFD 1042
D D ++I +++ + +++ + L+ + C ++ E+ + F ++ +D
Sbjct: 302 DGDMIIQISCIIWTLGQDDNYDKILLSLGTCSPITNTTIYSFPSELDMLYAFCTMIRDYD 361
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
+I+ G++I ++ ERA + + +RT
Sbjct: 362 VEIITGYNIANFDFPYILERANTVYNINPDAYTRTK------------------------ 397
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
+ ++ + E + R++ + + + G +V++++ + + ++ L+ Y + VA+ +
Sbjct: 398 ---SGAIFQVNKPKEGNFLRSN-TKVKLSGLVVIDMYMVCKDKLSLSNYKLNTVAKECIG 453
Query: 1163 RKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGID 1222
K + ++ + F G R R Y + + L ++++ SE+A++ I
Sbjct: 454 EKKEDMSYKEIPALF-KGNANDRARLGLYCIQDSILVMDLLKFFMTHIEISEIAKIANIP 512
Query: 1223 FFSVLSRGSQYRVESMLLRLAHTQNYLAISP--GNHQVASQPAMECLPLVMEPESGFYAD 1280
V++ G Q RV S LL A + Y+ P GN Q Q A V+ P SGFY
Sbjct: 513 MRRVITDGQQIRVFSCLLASAKNRGYILPMPQNGNFQ-GYQGAT-----VIAPLSGFYNT 566
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDE----L 1336
PV+V+DF SLYPS++ A+NLC+ T + DLH LK++
Sbjct: 567 PVLVVDFASLYPSIIQAHNLCYSTLIHN---------------EDLHKYPQLKEDDYETF 611
Query: 1337 LIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKL 1396
LI V +V + + +L LL L+ R M+++ + A + L I + +QLA+K+
Sbjct: 612 LISSGPVHFVKKHISESLLSNLLTTWLAKRKMIRKELTACADPK--LRTILDKQQLAIKV 669
Query: 1397 IANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE--NEKWKA--------- 1445
N YG+T SG +PC ++A++I GR+ LEK FV +E ++
Sbjct: 670 TCNAVYGFTGVA-SGMLPCLKIAETITMQGRAMLEKTKVFVENLSHEDLRSICKVGSIPQ 728
Query: 1446 ---------KVIYGDTD 1453
KVIYGDTD
Sbjct: 729 SSNVFDKPFKVIYGDTD 745
>gi|10140935|ref|NP_065512.1| DNA Polymerase [Alcelaphine herpesvirus 1]
gi|82046321|sp|O36363.1|DPOL_ALHV1 RecName: Full=DNA polymerase catalytic subunit
gi|2337976|gb|AAC58060.1| DNA Polymerase [Alcelaphine herpesvirus 1]
Length = 1026
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 204/458 (44%), Gaps = 68/458 (14%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I + KV+ E+ L F +L + +++ G++I ++ RA ++ D S
Sbjct: 365 IENVKVYEFPSEMDLLYGFFTLLRDYGIEMITGYNICNFDFPYILNRAQNVYNIKPEDFS 424
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
+T S + E + R+H S + + G +V
Sbjct: 425 KTKTNSLFYVYTPQ---------------------------EGNFMRSH-SKVKMSGVVV 456
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++++++ R ++ L+ Y + VA+ L K + ++ + F G + R + Y V
Sbjct: 457 IDMYQVCRDKLNLSNYKLNTVAKECLGEKKNDVSYKDIPILF-KGSSKDRAKLGMYCVQD 515
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-G 1254
A L ++++ +E+A++ I VLS G Q RV + LL A ++Y+ P
Sbjct: 516 AVLVIDLLKHFMTHIEITEIAKIANIPTRRVLSDGQQIRVFTCLLAAAQERDYILPMPVT 575
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
Q Q A V+ P SGFY PV+V+DF SLYPS++ A+NLC+ T + + K
Sbjct: 576 GSQEGYQGAT-----VINPISGFYNTPVLVVDFASLYPSIIQAHNLCYSTLIKQQDLPKF 630
Query: 1315 NTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIK 1374
L + + + +I V +V + +L LL+ L+ R +K+ ++
Sbjct: 631 TNLTANDY-----------ETFMISGGPVHFVKKHKTESLLASLLKTWLAKRKSIKKELE 679
Query: 1375 KLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAI 1434
+ ++ + I + +QLA+K+ N YG+T SG +PC +A+++ GR+ LEK
Sbjct: 680 QCQDAK--MKTILDKQQLAIKVTCNSVYGFTGVA-SGMLPCLMIAETVTLQGRTMLEKTK 736
Query: 1435 SFVN-------------------ENEKWKAKVIYGDTD 1453
FV ++ K +V+YGDTD
Sbjct: 737 QFVENVTVEYLQKICNFEVQCLPQHPNPKFRVVYGDTD 774
>gi|323716902|gb|ADY05322.1| DNA polymerase [Callithrix penicillata lymphocryptovirus 1]
Length = 748
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 209/467 (44%), Gaps = 73/467 (15%)
Query: 990 NDSDHAVEIYVLLYCKSE---SHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCS 1040
N++D ++I +L+ E +++R L+ + C +V+ E+ L F +++
Sbjct: 307 NETDLILQISCVLWSVGEPTSNYRRILLTVGTCAEIDGVEVYEFPSEMDLIYAFFQLIRD 366
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+ +I+ G+++ ++ +RA H+ I+ L G E+ M
Sbjct: 367 LNVEIITGYNVANFDWPYILDRARHI-----YGINPASLGKIRGGGVCEVRRPNDAGKMF 421
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+ + + + G I ++++ + + ++ L+ Y ++ VA+ +
Sbjct: 422 SRA---------------------CTKIRISGVIPIDMYSVCKEKLSLSDYKLDTVAKRL 460
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L K + ++ + + F +GP R R Y V + L ++++N SE+A++
Sbjct: 461 LGTKKEDVHYKEIPRLFRAGP-EERKRLGMYCVQDSVLVMDLLNHFVTHVEISEIAKIAN 519
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-----GNHQVASQPAMECLPLVMEPES 1275
I VL G Q RV S LL A + ++ P +Q A+ V++P +
Sbjct: 520 IPCRRVLDDGQQIRVFSCLLAAAQKEGFILPMPEPSDRDGYQGAT---------VIQPIA 570
Query: 1276 GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK-- 1333
GFY PV+V+DF SLYPS++ A+NLC+ T + P +E LRDL+
Sbjct: 571 GFYNSPVLVVDFASLYPSIIQAHNLCYSTI---VTPGEEGK------------LRDLRPG 615
Query: 1334 ---DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNAR 1390
+ + +V + K L LLE L+ R +++ + +Q I + +
Sbjct: 616 EDYESFSLSGGTFHFVKKHIHKSFLASLLESWLAKRKAIRKLLGACNDPRQ--RTILDKQ 673
Query: 1391 QLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
QLA+K N YG+T G PC +A+++ GR+ LE+A +FV
Sbjct: 674 QLAIKCTCNAVYGFTGVA-HGLFPCLTIAETVTLQGRTMLERAKAFV 719
>gi|6552717|gb|AAF16520.1|AF191042_1 DNA polymerase [porcine lymphotropic herpesvirus 1]
Length = 1004
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 168/355 (47%), Gaps = 53/355 (14%)
Query: 1126 SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
+ + + G +V++++ + + ++ L+ Y + VA+ + K + ++ + F G R
Sbjct: 417 TKVKLSGLVVIDMYMVCKDKLSLSNYKLNTVAKECIGEKKEDMSYKEIPALF-KGNANDR 475
Query: 1186 YRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHT 1245
R Y + + L ++++ SE+A++ I V++ G Q RV S LL A
Sbjct: 476 ARLGLYCIQDSVLVMDLLKFFMTHIEISEIAKIANIPMRRVITDGQQIRVFSCLLASAKN 535
Query: 1246 QNYLAISP--GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFC 1303
+ Y+ P GN Q Q A V+ P SGFY PV+V+DF SLYPS++ A+NLC+
Sbjct: 536 RGYILPMPQNGNFQ-GYQGAT-----VITPLSGFYNTPVLVVDFASLYPSIIQAHNLCYS 589
Query: 1304 TCLGKILPSKENTLGVSSFRPDLHVLRDLKDE----LLIPPNGVMYVPPKVRKGVLPRLL 1359
T + DLH LK+E LI V +V + + +L LL
Sbjct: 590 TLIH---------------HEDLHKYPQLKEEDYETFLISSGPVHFVKKHISESLLSNLL 634
Query: 1360 EEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELA 1419
L+ R M+++ + A + L I + +QLA+K+ N YG+T SG +PC ++A
Sbjct: 635 TTWLAKRKMIRKELAACADPK--LRTILDKQQLAIKVTCNAVYGFTGVA-SGMLPCLKIA 691
Query: 1420 DSIVQCGRSTLEKAISFV---------------------NENEKWKAKVIYGDTD 1453
++I GR+ LEK FV N +K KVIYGDTD
Sbjct: 692 ETITMQGRAMLEKTKVFVENLSHEDLHSICKVGFMPQSPNSIDK-PFKVIYGDTD 745
>gi|156752126|gb|ABU93815.1| DNA polymerase [lung-eye-trachea disease-associated herpesvirus]
Length = 598
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 210/479 (43%), Gaps = 97/479 (20%)
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
L+ P V C+ E L F L + P+ + G++I G L +L +A +
Sbjct: 148 LLDDPTTTVIECASEFELLLAFFTFLKQYSPEFVTGYNINGFDLPYLITKAVSV------ 201
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
E K+ G + ++RG + + + + +T + + + G
Sbjct: 202 ------YEMKLD-GYGKFNKRGTFKVI--------------DLAHNRFQKT--TKIKLNG 238
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP---GRARYRCV 1189
+ L+++ +++G++ L Y + V E VLR + + ++ + +FA GP G CV
Sbjct: 239 LVALDMYPIVKGKLSLANYKLNTVCEEVLRERKNDLSYKDIPVYFAEGPEERGVIGDYCV 298
Query: 1190 EYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1249
+ + KL + ++M +E+A++ I V++ G Q RV + LL+ A + YL
Sbjct: 299 QDSLLVVKLFFKYSPHVEM----AEIAKLAHISLNRVVTDGQQIRVFTCLLKAARNRGYL 354
Query: 1250 ----------------------------AISPGNHQVASQPAMECL-------------- 1267
A+S Q S+PA
Sbjct: 355 LPDRRFGERVAELGDATDAPKDDESDEDAVSESESQ-DSRPASRASSAGSSGRRVIGYQG 413
Query: 1268 PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLH 1327
V+ P++GFY DPVVV DF SLYPS++ A+NLCFCT T GV R D
Sbjct: 414 ATVLSPDTGFYVDPVVVFDFASLYPSIIQAHNLCFCTLTKDASALTGLTEGVDYARYD-- 471
Query: 1328 VLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIF 1387
+ + + YV P V + +L LL + L+ R ++ +K AP +Q L
Sbjct: 472 ----------VQGHAMYYVLPHVERSLLSELLTDWLALRKDIRARMKT-APEEQQLLL-- 518
Query: 1388 NARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAK 1446
+ +QLA+K+ N YG+T G +G +PC E+A ++ GR+ L ++ +E+W+ +
Sbjct: 519 DKQQLAMKVTCNSVYGFTGVG-AGLLPCLEIAATVTTVGRAMLLSTRDYI--HERWRDR 574
>gi|323716867|gb|ADY05311.1| DNA polymerase [Hylobates syndactylus lymphocryptovirus 1]
Length = 809
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 229/499 (45%), Gaps = 83/499 (16%)
Query: 970 GDL---RPDPRYDSINVVALAFE-----------NDSDHAVEIYVLLYCKSE---SHQRS 1012
GDL R D + S V+A E N++D ++I +++ + ++R
Sbjct: 335 GDLSVRREDSTWPSYTVLAFDIECLGEEGFPTATNEADLILQISCVIWTTGDEAGQYRRI 394
Query: 1013 LVGIPDCK------VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL 1066
L+ + C+ ++ E+ + F +++ +I+ G+++ ++ +RA H+
Sbjct: 395 LLTLGTCEDIEGVEIYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHI 454
Query: 1067 -GIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHA 1125
GI A +I G+ + L A
Sbjct: 455 YGIN--------------PASLGKIRTGGVCEVRRPHDAGKGFLRA-------------T 487
Query: 1126 SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRAR 1185
+ + + G I ++++ + R ++ L+ Y ++ VA+ +L + + ++ + + FA GP R R
Sbjct: 488 TKVRITGIIPIDMYAVCRDKLSLSDYKLDTVAQHLLGARKEDVHYKEIPRLFAQGP-RGR 546
Query: 1186 YRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHT 1245
R Y V + L ++++N + +E+A++ I VL G Q RV S LL A
Sbjct: 547 QRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCRRVLDDGQQIRVFSCLLAAAQK 606
Query: 1246 QNYL-----AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNL 1300
+N++ A+ +Q A+ V++P SGFY PV+V+DF SLYPS++ A+NL
Sbjct: 607 ENFILPMPSALDRDGYQGAT---------VIQPLSGFYNCPVLVVDFASLYPSIIQAHNL 657
Query: 1301 CFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLE 1360
C+ T I P +E+ L RP +D G +Y V+K V L
Sbjct: 658 CYST---MITPGEEHRL--VGLRPG-------EDYESFKLTGGIY--HFVKKHVHESFLA 703
Query: 1361 EILSTRIMVKQAIKKLAPSQQILHR--IFNARQLALKLIANVTYGYTAAGFSGRMPCAEL 1418
+L++ + ++AIKK+ + H+ I + +QLA+K N YG T +G PC +
Sbjct: 704 SLLTSWLAKRKAIKKMLSACANPHQRTILDKQQLAIKCTCNAVYGXTGXA-NGLFPCLSI 762
Query: 1419 ADSIVQCGRSTLEKAISFV 1437
A+++ GR+ LE+A +FV
Sbjct: 763 AETVTLQGRTMLERAKAFV 781
>gi|8925896|gb|AAF81664.1|AF204167_1 DNA polymerase [Macaca nemestrina rhadinovirus 2]
Length = 862
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 204/466 (43%), Gaps = 85/466 (18%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I D V E + F +L F+ D L G++I L +L RA+ + LN+ +
Sbjct: 197 IRDTDVLEFPSEYDMLVSFFAMLRDFEVDFLTGYNISNFDLPYLIARASQVYNLQLNEYT 256
Query: 1076 RTPLESKIAAGD-SEISE-RGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGR 1133
KI G E+ E RG + S + + G
Sbjct: 257 ------KIKTGSIFEVHEPRGAGGGFMRS----------------------VSKIKIAGI 288
Query: 1134 IVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVV 1193
+ ++++++ R ++ L+ Y ++ VA L K + ++ + F SG R + Y V
Sbjct: 289 VPIDMYQVCREKLSLSDYKLDTVARQCLGGKKEDVSYKDIPPLFRSGSA-GRAKVGSYCV 347
Query: 1194 GRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP 1253
+ L ++++ + SE+A++ I VL+ G Q RV S LL A +N++ P
Sbjct: 348 MDSVLVMDLLKMFMIHVEISEIAKLAKIQARRVLTDGQQLRVFSCLLEAAARENFILPVP 407
Query: 1254 -----GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL-G 1307
G +Q A+ V+ P GFY +PV+V+DF SLYPS++ A+NLC+ T + G
Sbjct: 408 TPEGQGGYQGAT---------VINPIPGFYDEPVLVVDFASLYPSIIQAHNLCYSTMIHG 458
Query: 1308 KILPSKENTLGVSSFRPDLHVLRDLK----DELLIPPNGVMYVPPKVRKGVLPRLLEEIL 1363
+ DLH+ L + ++ V +V R+ +L RLL L
Sbjct: 459 R----------------DLHLHPTLTPDDYETFVLSGGPVHFVKKHKRESLLGRLLTVWL 502
Query: 1364 STRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIV 1423
R +++ + A L I + +QLA+K+ N YG+T SG +PC +A+++
Sbjct: 503 EKRRAIRRTLA--ACDDPSLKTILDKQQLAIKVTCNAVYGFTGVA-SGLLPCINIAETVT 559
Query: 1424 QCGRSTLEKAISF----------------VNENEKWKAKVIYGDTD 1453
GR+ LE + S+ V K +V+YGDTD
Sbjct: 560 LRGRTMLEMSKSYVEALTVSDLRERLGREVTAGPAAKFRVVYGDTD 605
>gi|158357008|gb|ABN49965.2| DNA polymerase [Apodemus sylvaticus rhadinovirus 1]
Length = 757
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 210/473 (44%), Gaps = 70/473 (14%)
Query: 1004 CKSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLG 1057
C + S + L + C +V+ C E L F+ + + + G++I L
Sbjct: 323 CATNSISKLLFSLGTCDPIEGTEVYECPSEYDLLMGFLIFMRDSGVEFIAGYNIANFDLP 382
Query: 1058 FLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIE 1117
++ +RA + +I T + E+ + I+
Sbjct: 383 YIIDRATQI-----YNIDCTQFTKLLTMRTFEVRKP----------------------ID 415
Query: 1118 DEWGRTHA-SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKW 1176
G A + + + G I ++++ + + ++ L+ Y + VA+ L + + ++ +
Sbjct: 416 SGAGFMRAQTKIRISGVIPVDMYTVCKDKLSLSDYKLNTVAKHCLNMEKEDVSYKDIPVL 475
Query: 1177 FASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRV 1235
F GP GRA+ Y V ++L L+++ +E+ ++ I VL+ G Q RV
Sbjct: 476 FKDGPTGRAKIG--TYCVMDSQLVLDLLKYFMAHIEIAEIGKLAKIPVRRVLTDGQQIRV 533
Query: 1236 ESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMM 1295
S LL A +NY I P N S + V++P +GFY PV+V+DF SLYPS++
Sbjct: 534 FSSLLDAARRENY--ILPSNQAKCSNSGYQG-ATVIDPITGFYNTPVLVVDFASLYPSII 590
Query: 1296 IAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRK-GV 1354
A+NLC+ T I+P +N L + L E P+G ++ K RK +
Sbjct: 591 QAHNLCYST----IIP--DNKLQM------FPNLTPTDYETFTLPSGTVHFVKKHRKCSL 638
Query: 1355 LPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMP 1414
L RLL + L+ R ++ + A I I + +QLA+K+ N YG+T SG +P
Sbjct: 639 LSRLLTKWLAKRKEIRAQLA--ACDDPITKTILDKQQLAIKVTCNSVYGFTGVA-SGMLP 695
Query: 1415 CAELADSIVQCGRSTLEKAISFVNE--------------NEKWKAKVIYGDTD 1453
C ++A++I GR LEK+ +++ N +VIYGDTD
Sbjct: 696 CLQIAETITYQGRKMLEKSRAYIENITSATLGALMHKTYNPDAYFRVIYGDTD 748
>gi|302850307|ref|XP_002956681.1| hypothetical protein VOLCADRAFT_67281 [Volvox carteri f. nagariensis]
gi|300258042|gb|EFJ42283.1| hypothetical protein VOLCADRAFT_67281 [Volvox carteri f. nagariensis]
Length = 991
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 224/518 (43%), Gaps = 77/518 (14%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++SI+++ R P+ + D + ++V+++ + + L C
Sbjct: 186 LRIMSIDIECCGRKGCFPEAKIDPVIQIASMVSVSGRTEGPVVKNVMTLGSCAP------ 239
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
I +V E + + +L DPDI++G++I L +L ERA L IG
Sbjct: 240 ---IVGAEVMSFDDEKDMLLRWRDLLIESDPDIIIGYNILNFDLPYLYERADALKIGAKF 296
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ S DS+ S + +G + + G
Sbjct: 297 QVWGRVRGSHTRMRDSQFSSKA-------------------------YGTHEYKDITIEG 331
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ ++ + KL+ Y++ +V+ L + + + +G R R Y
Sbjct: 332 RVQFDLLTAIQRDHKLSSYSLNSVSAHFLGEQKEDVHHSAIAD-LQAGNEETRRRLAVYC 390
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL--- 1249
+ A L ++++L E+ARV G+ +L+RG +V S LLR A ++++
Sbjct: 391 LKDAYLPQRLLDKLMYTYNYIEMARVTGVPLSYLLTRGQSIKVFSQLLRKAQVKDFVIPN 450
Query: 1250 ----AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
+ G V + A V+EP+ GFY PV LDF SLYPS+M+A+NLC+ T
Sbjct: 451 IKVTGPANGGDGVGYEGAT-----VLEPKIGFYERPVATLDFASLYPSIMMAHNLCYTTL 505
Query: 1306 LGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILST 1365
+ P+ + ++ P G +V ++G+LP +LEE+L+
Sbjct: 506 V-----------------PNDRLATVPVEDRAQSPCGDWFVRGTRQRGLLPEILEELLAA 548
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R K +K A + + + RQLALK+ AN YG+T A G+MPC ++ S+
Sbjct: 549 RKRAKNDLK--AETDPFKRAVLDGRQLALKVSANSVYGFTGATV-GKMPCLAISASVTSY 605
Query: 1426 GRSTLEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
GR + K + V E+ + +VIYGDTD V
Sbjct: 606 GREMIMKTRALVQEHYTRANGYETDCEVIYGDTDSVMV 643
>gi|153803864|gb|ABN49957.1| DNA polymerase [Bandicota indica rhadinovirus 4]
Length = 767
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 221/478 (46%), Gaps = 67/478 (14%)
Query: 990 NDSDHAVEIYVLLY-CKSESHQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCSFD 1042
N+ D ++I +++ C ++ + L+ + C+ ++ C E L F+ +L ++
Sbjct: 333 NEHDTIIQISCVIWNCHTQETDKILLSLGTCEKLENITIYECPSEYDLLICFLALLRDYN 392
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
+ + G++I L ++ +RA H+ + ++ ++S + +
Sbjct: 393 IEFITGYNISNFDLPYIIDRATHIYNIDCSRFTKMKIDSIFE---------------VRK 437
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
P+ + + + + + + G + ++++ + + ++ L+ Y + VA+ L
Sbjct: 438 PIDSGAGFMRSQ-----------TKIKISGIVPIDMYTVCKDKLSLSDYKLNTVAKHCLS 486
Query: 1163 RKIPSIPFRVLTKWFASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
+ + ++ + F SGP GRA+ Y V + L L++++ SE+ ++ I
Sbjct: 487 TEKEDVSYKEIPILFKSGPVGRAKVG--SYCVMDSVLVLDLLHYFMAHIEISEIGKLAKI 544
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN--HQVASQPAMECLPLVMEPESGFYA 1279
VL+ G Q RV S LL A +Y+ S H Q A V++P SGFY+
Sbjct: 545 PIRRVLTDGQQIRVFSCLLDAARHNHYILPSTNTRGHNEGYQGAT-----VIDPISGFYS 599
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK----DE 1335
PV+V+DF SLYPS++ A+NLC+ T I+P+ LH+ +L +
Sbjct: 600 TPVLVVDFASLYPSIIQAHNLCYST----IIPNDM-----------LHMFPNLTQHDYET 644
Query: 1336 LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAP-SQQILHRIFNARQLAL 1394
++ V +V + +L LL + LS R KQ +LA S + I + +QLA+
Sbjct: 645 FMLSSGPVHFVKKHKKCSILSTLLTKWLSKR---KQLKHQLATCSDPVTKTIIDKQQLAI 701
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDT 1452
K+ N YG+T SG +PC ++A+++ GR LE + S++ + + G T
Sbjct: 702 KVTCNSVYGFTGVA-SGMLPCLKIAETVTFRGRQMLEMSRSYIENMSPYTLGKLVGRT 758
>gi|313844188|ref|YP_004061851.1| hypothetical protein OlV1_219 [Ostreococcus lucimarinus virus OlV1]
gi|312599573|gb|ADQ91595.1| hypothetical protein OlV1_219 [Ostreococcus lucimarinus virus OlV1]
Length = 960
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 201/445 (45%), Gaps = 71/445 (15%)
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERA-------AHLGIGLLNDISRT 1077
S E + F K L D DI+ GW+I G + ++ +RA + +G L D
Sbjct: 256 STEKEMLEAFHKYLHKKDVDIITGWNIFGFDMEYIYKRAQINGCHYSFFNLGKLKDT--- 312
Query: 1078 PLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLN 1137
ES++ ++S + DN+L L + GR + +
Sbjct: 313 --ESELVI--KKLSSSALGDNLL-------------------------KLLPMSGRFIFD 343
Query: 1138 VWRLMRGEVKLNMYTVEAVAETVL-RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRA 1196
++ ++ KL+ Y ++ V++ L +KI P + ++ P + R EY +
Sbjct: 344 MFHEIKKGYKLDSYKLDNVSKLYLGDQKIDMAPKEMFARYREEDPVKLR-EVAEYCIKDT 402
Query: 1197 KLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH 1256
L ++M +L + E+A+ + ++ RG Q +V S L + A ++ +
Sbjct: 403 LLPHKLMKKLCTLLNLVEMAKATWVPANFLVERGQQIKVFSQLTKKARELGFMVPTIRYG 462
Query: 1257 QVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE-- 1314
+ +P V+E + G Y P+ LDF++LYPS+M+A+NLC+ + ++ K+
Sbjct: 463 AIPEEPYEGA--TVLEAQKGAYYTPITALDFEALYPSIMMAHNLCYSSY---VMDEKKYG 517
Query: 1315 NTLGVS--SFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
N G++ +FR + +D VP +LP +L E+ R KQA
Sbjct: 518 NVPGITYETFRVADRTYKFAQD-----------VP-----SLLPAILLELKQFR---KQA 558
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+ +A + + ++N +QLA K+ N YG+T AG G +PC +A + GRS +E+
Sbjct: 559 KRDMANATGFMKEVYNGKQLAYKISMNSVYGFTGAG-KGILPCVPIASTTTCKGRSMIEE 617
Query: 1433 AISFVNENEKWKAKVIYGDTDRYTV 1457
++V N AKV YGDTD V
Sbjct: 618 TKNYVEANFP-GAKVRYGDTDSVMV 641
>gi|159463358|ref|XP_001689909.1| DNA polymerase delta subunit one [Chlamydomonas reinhardtii]
gi|158283897|gb|EDP09647.1| DNA polymerase delta subunit one [Chlamydomonas reinhardtii]
Length = 1091
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 225/522 (43%), Gaps = 85/522 (16%)
Query: 957 LTLLSIEVQAESRGDLRPDPRYDSI----NVVALAFENDSDHAVEIYVLLYCKSESHQRS 1012
L ++SI+++ R P+ + D + ++V+++ + D I L C S
Sbjct: 291 LRIMSIDIECCGRKGCFPEAKIDPVIQIASMVSVSGKMDGPVVKNIMTLGSCAS------ 344
Query: 1013 LVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLN 1072
+VG +V + E + + +L DPDI++G++I L +L ERA L IG
Sbjct: 345 IVG---AEVMSFNDEAEMLLRWRDLLVESDPDIIIGYNILNFDLPYLYERADALKIGKKF 401
Query: 1073 DISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGG 1132
+ S D + S + +G + + G
Sbjct: 402 QVWGRVRGSHTRMRDGQFSSKA-------------------------YGTHEYKDITIEG 436
Query: 1133 RIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYV 1192
R+ ++ ++ + KL+ Y++ +V+ L + + + +G R R Y
Sbjct: 437 RVQFDLLTAIQRDHKLSSYSLNSVSAHFLGEQKEDVHHSAIAD-LQAGNEETRRRLAVYC 495
Query: 1193 VGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIS 1252
+ A L ++++L E+ARV G+ +L+RG +V S LLR A + ++ +
Sbjct: 496 LKDAYLPQRLLDKLMYTYNYIEMARVTGVPLSYLLTRGQSIKVFSQLLRKAAAKGFVIPN 555
Query: 1253 -------PGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
G V + A V++P+ GFY PV LDF SLYPS+M+A+NLC+ T
Sbjct: 556 IKVQGPVAGADGVGYEGAT-----VLDPKIGFYDRPVATLDFASLYPSIMMAHNLCYTTL 610
Query: 1306 LGK----ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEE 1361
L K I+P ++ P+G +V ++G+LP +LEE
Sbjct: 611 LTKDQLNIVPPEDREQS---------------------PSGDWFVRNSRQRGLLPEILEE 649
Query: 1362 ILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADS 1421
+L+ R K +K A + + RQLALK+ AN YG+T A G+MPC ++ S
Sbjct: 650 LLAARKRAKNDLK--AEKDPFKRAVLDGRQLALKVSANSVYGFTGATV-GKMPCLAISAS 706
Query: 1422 IVQCGRSTLEKAISFVNEN------EKWKAKVIYGDTDRYTV 1457
GR + V E+ + +VIYGDTD V
Sbjct: 707 TTSYGREMIMTTRQLVQEHYTRANGYETDCEVIYGDTDSVMV 748
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 1 MADSQPDSNIFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
+AD P S + + +D+Y+A P G D +V +VPV+R++G AG C
Sbjct: 64 VADFDPASTAIVFQQLEVDYYLAEPRAGVDTVPV-----EVKQVPVLRLFGVNAAGNSVC 118
Query: 61 LHIHRALPYLYV 72
+H PY +
Sbjct: 119 ALVHGFEPYFLI 130
>gi|343963274|gb|AEM72562.1| U38, partial [Elephant endotheliotropic herpesvirus 6]
Length = 781
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 200/469 (42%), Gaps = 84/469 (17%)
Query: 1012 SLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
S IP+ ++ C+ E L F+ + + P+ + G++I + ++ R + I
Sbjct: 370 SCAEIPEVYIYECASEYELIEAFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNI--- 426
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
G +RG +E + R + +
Sbjct: 427 ------------PCGTFTKMKRGRMTCFKG--------------MESFFNRCQCK-VTMS 459
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA---SGPGRARYRC 1188
G ++++++R+ +V + ++ + + +L K S+ ++ ++ F +G G C
Sbjct: 460 GIVIIDMYRVCMDKVSAPNHKLDTIVDMLLGEKKHSVSYKQISVLFRKDDAGRGVVGAYC 519
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
V V KL +++ + S +AR+ I V+ G Q R+ + +L A ++
Sbjct: 520 VHDSVLVHKLFCKMLFHYE----ASAIARLSNISMNKVVFDGQQSRIFACMLAAARKED- 574
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
I P + V+EP++GFY PV V DF SLYPS++ AYNLC+CT
Sbjct: 575 -LIIPSIDEAGEDTYQG--ATVLEPKTGFYNTPVAVFDFASLYPSIIQAYNLCYCT---- 627
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVM---YVPPKVRKGVLPRLLEEILST 1365
L + +N ++S R D D ++ N +V P +RK +L +LL L+
Sbjct: 628 -LVTDDN---LTSLRED--------DVTVVTTNTGRVHKFVKPHIRKSILSQLLTSWLAE 675
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R V++ +K ++H + + +QLALKL N YG+T G PC +A+S+
Sbjct: 676 RKAVREKLKHC--KDPLMHILLDKQQLALKLTCNAVYGFTGVS-KGMFPCLPIAESVTAQ 732
Query: 1426 GRSTLEKAISFVNE---------------------NEKWKAKVIYGDTD 1453
GR L ++ E +EK+K V+YGDTD
Sbjct: 733 GRQLLAITKQYICERFNDWTFLTQIAPALVDCKIDHEKFKIDVVYGDTD 781
>gi|321470468|gb|EFX81444.1| hypothetical protein DAPPUDRAFT_26394 [Daphnia pulex]
Length = 184
Score = 128 bits (322), Expect = 2e-26, Method: Composition-based stats.
Identities = 71/183 (38%), Positives = 96/183 (52%), Gaps = 36/183 (19%)
Query: 10 IFSVRIVSIDHYMAPPIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTCLHIHRALPY 69
+ SVR+VS D+YM+ PIPG D YS+ +G ++ +VPVIR++GST G K CLH+H PY
Sbjct: 1 VVSVRLVSADYYMSSPIPGLDFGYSTYRGLEIKKVPVIRIFGSTSTGYKVCLHVHGVFPY 60
Query: 70 LYVPCADIPVQLRQEDDGYMHAISLALEKALKV-KGSAGSKRQHVHECSLV--------- 119
LYVP D H I +AL++A+ + +G S HV + LV
Sbjct: 61 LYVP-----YDGSAPPDKMGHQIVIALDRAVNILQGQVNSSSHHVFKAVLVSGIPIYGYH 115
Query: 120 --------------RAKK-------GGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLH 158
+K G V K LQP E HIP++LQFL+D+NL GM +H
Sbjct: 116 GKEHQLFKLYFYNPNTRKHSYDLLLNGVVLKKILQPCEGHIPYILQFLMDFNLQGMNFIH 175
Query: 159 LSK 161
L K
Sbjct: 176 LKK 178
>gi|304318325|gb|ADM22506.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|304319327|gb|ADM23495.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 128/531 (24%), Positives = 221/531 (41%), Gaps = 136/531 (25%)
Query: 1007 ESHQRSLV--GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
ESH L G+P V E + F+ ++ + P+ + G++I FL +
Sbjct: 421 ESHLNELAARGLPTPVVLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFLLAK-- 478
Query: 1065 HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
L DI + PL+ G ++ RG+ + G++H
Sbjct: 479 ------LTDIYKVPLD-----GYGRMNGRGVFRVW-------------------DIGQSH 508
Query: 1125 ---ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
S + V G + ++++ ++ ++KL+ Y + AVAE VL+ K + +R + ++A+GP
Sbjct: 509 FQKRSKIKVNGMVNIDMYGIITDKIKLSSYKLNAVAEAVLKDKKKDLSYRDIPAYYAAGP 568
Query: 1182 ---GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
G C++ + +L + + L++ S +AR+ GI+ + G Q RV +
Sbjct: 569 AQRGVIGEYCIQDSLLVGQLFFKFLPHLEL----SAVARLAGINITRTIYDGQQIRVFTC 624
Query: 1239 LLRLAHTQNYL------AISPGNHQVASQPAMECLPL----------------------- 1269
LLRLA + ++ +V +PA
Sbjct: 625 LLRLADQKGFILPDTQGRFRGAGGEVPKRPAAAREDEERPEEEGEDEDEREEGGGEREPE 684
Query: 1270 ----------------VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
V++P SGF+ +PVVV DF SLYPS++ A+NLCF T
Sbjct: 685 GARETAGRHVGYQGARVLDPTSGFHVNPVVVFDFASLYPSIIQAHNLCFSTL-------- 736
Query: 1314 ENTLGVSSFRPD-LHVLRDLKDELLIPPNG--VMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
S R D + L KD L I G + +V VR+ +L LL + L+ R ++
Sbjct: 737 -------SLRADAVAHLEAGKDYLEIEVGGRRLFFVKAHVRESLLSILLRDWLAMRKQIR 789
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
I + +P + +L + +Q A+K++ N YG+T G +PC +A ++ GR L
Sbjct: 790 SRIPQSSPEEAVL---LDKQQAAIKVVCNSVYGFTGVQ-HGLLPCLHVAATVTTIGREML 845
Query: 1431 EKAISFVNENEKWKA----------------------KVIYGDTDR-YTVC 1458
+V + +W A ++IYGDTD + +C
Sbjct: 846 LATREYV--HARWAAFEQLLADFPEAADMRAPGPYSMRIIYGDTDSIFVLC 894
>gi|134038638|gb|ABO48392.1| DNA polymerase catalytic subunit [Wood mouse herpesvirus]
Length = 1026
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 208/476 (43%), Gaps = 76/476 (15%)
Query: 1004 CKSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLG 1057
C + S + L + C +V+ C E L F+ + + + G++I L
Sbjct: 323 CATNSISKLLFSLGTCDPIEGTEVYECPSEYDLLMGFLIFMRDSGVEFIAGYNIANFDLP 382
Query: 1058 FLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIE 1117
++ +RA + +I T + E+ + I+
Sbjct: 383 YIIDRATQI-----YNIDCTQFTKLLTMRTFEVRKP----------------------ID 415
Query: 1118 DEWGRTHA-SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKW 1176
G A + + + G I ++++ + + ++ L+ Y + VA+ L + + ++ +
Sbjct: 416 SGAGFMRAQTKIRISGVIPVDMYTVCKDKLSLSDYKLNTVAKHCLNMEKEDVSYKDIPVL 475
Query: 1177 FASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRV 1235
F GP GRA+ Y V ++L L+++ +E+ ++ I VL+ G Q RV
Sbjct: 476 FKDGPTGRAKIG--TYCVMDSQLVLDLLKYFMAHIEIAEIGKLAKIPVRRVLTDGQQIRV 533
Query: 1236 ESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMM 1295
S LL A +NY I P N S + V++P +GFY PV+V+DF SLYPS++
Sbjct: 534 FSSLLDAARRENY--ILPSNQAKCSNSGYQG-ATVIDPITGFYNTPVLVVDFASLYPSII 590
Query: 1296 IAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK----DELLIPPNGVMYVPPKVR 1351
A+NLC+ T I+P + L + +L + +P V +V +
Sbjct: 591 QAHNLCYST----IIPDNK-----------LQMFPNLTPADYETFTLPSGTVHFVKKHKK 635
Query: 1352 KGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSG 1411
+L RLL + L+ R ++ + A I I + +QLA+K+ N YG+T SG
Sbjct: 636 CSLLSRLLTKWLAKRKEIRAQLA--ACDDPITKTILDKQQLAIKVTCNSVYGFTGVA-SG 692
Query: 1412 RMPCAELADSIVQCGRSTLEKAISFVNE--------------NEKWKAKVIYGDTD 1453
+PC ++A++I GR LEK+ +++ N +VIYGDTD
Sbjct: 693 MLPCLQIAETITYQGRKMLEKSRAYIENITSATLGALMHKTYNPDAYFRVIYGDTD 748
>gi|323716905|gb|ADY05323.1| DNA polymerase [Ateles paniscus lymphocryptovirus 1]
Length = 748
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 211/465 (45%), Gaps = 65/465 (13%)
Query: 990 NDSDHAVEIYVLLYCKSE---SHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCS 1040
N+SD ++I +L+ + ++R L+ + C +++ E+ + F +++
Sbjct: 308 NESDLILQISCVLWRVGDPLGQYRRILLTLGTCTDIEGVEIYEFPSELDMIYAFFQLIRD 367
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+I+ G+++ ++ +RA H I LN S + S G E+ M
Sbjct: 368 LSVEIVTGYNVANFDWPYILDRARH--IYGLNPASLGKIRS---GGVCEVRRPHDAGKMF 422
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+ + + + G + ++++ + R ++ L+ Y ++ VA+ +
Sbjct: 423 SRA---------------------CTKVRISGVVPIDMYAVCRDKLSLSDYKLDTVAQRL 461
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L + + ++ + F GP R R Y V + L ++++N + SE+A++
Sbjct: 462 LGTRKEDVHYKEIPHLFRQGPD-GRRRLGMYCVQDSALVMDLLNHFVIHVEISEIAKIAH 520
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG-NHQVASQPAMECLPLVMEPESGFYA 1279
I VL G Q RV S LL A ++++ P + + Q A V++P SGFY
Sbjct: 521 IPCRRVLDDGQQIRVFSCLLAAAQKEDFILPMPEPSDRDGYQGAT-----VIQPISGFYN 575
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK-----D 1334
PV+V+DF SLYPS++ A+NLC+ T I P +E LRDL+ +
Sbjct: 576 SPVLVVDFASLYPSIIQAHNLCYSTL---ITPGEEWR------------LRDLRPGEDYE 620
Query: 1335 ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLAL 1394
+ +V V K L LLE L+ R +++ + +Q I + +QLA+
Sbjct: 621 SFALTGGTFHFVKKHVHKSFLASLLESWLAKRKAIRKLLAACGDPRQ--RTILDKQQLAI 678
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE 1439
K N YG+T +G PC +A+++ GR+ LE+A +FV +
Sbjct: 679 KCTCNAVYGFTGVA-NGLFPCLSIAETVTLQGRTMLERAKAFVEK 722
>gi|321496564|ref|YP_004207849.1| DNA polymerase [Rodent herpesvirus Peru]
gi|320332466|gb|ADW24354.1| DNA polymerase [Rodent herpesvirus Peru]
gi|320332549|gb|ADW24436.1| DNA polymerase [Rodent herpesvirus Peru]
Length = 1019
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 221/493 (44%), Gaps = 81/493 (16%)
Query: 990 NDSDHAVEIYVLLY-CKSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSFD 1042
N+ D ++I + + ++ Q++L+ I C ++ E + F+ +L D
Sbjct: 307 NEPDQIIQISCVFWNTLHKTTQKTLLSIGTCAPLDDTTIYEFPSEFDMLMGFLGLLRDGD 366
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
+ + G++I L ++ RA LL +I+ + E+ +
Sbjct: 367 IEFITGYNISNFDLPYIINRAT-----LLYNINCGQYCKVLKNSTFEVRQP--------- 412
Query: 1103 PVVAESLLAKDAIIEDEWGRTHA-SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
++ G A S + + G + ++++ + + ++ L+ Y + VA L
Sbjct: 413 -------------MDSGAGFMRAQSKIRISGIVPIDMYVVCKDKLSLSDYKLNTVATHCL 459
Query: 1162 RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
+ + ++ + F GP + R R +Y V + L L+++ +E+ ++ I
Sbjct: 460 KACKEDVSYKEIPTLFRRGP-QERARVGKYCVMDSLLVLDLLKYFMSHVEIAEIGKLAKI 518
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNH--QVASQPAMECLPLVMEPESGFYA 1279
VL+ G Q RV S LL + + Y+ S G H Q Q A V+ P GFY
Sbjct: 519 PLRRVLTDGQQIRVWSSLLDASRQEGYILPSCGTHDQQQGYQGAT-----VINPVPGFYN 573
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK----DE 1335
P++V+DF SLYPS++ A+NLC+ T I+P ++ L + DL+ D
Sbjct: 574 TPILVVDFASLYPSIIQAHNLCYST----IIPHEK-----------LSLYHDLQATDYDT 618
Query: 1336 LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQLAL 1394
+ V +V P ++ VL RLL + L+ R K+ K++A H+ I + +QLA+
Sbjct: 619 FNLASGPVHFVKPHKKESVLSRLLTKWLAKR---KEIRKEMANCTDETHKTILDKQQLAI 675
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNE--------------N 1440
KL N YG+T SG +PC ++A+++ GR LE++ +F+ +
Sbjct: 676 KLTCNSVYGFTGVA-SGLLPCLKIAETVTYRGRQMLEESKAFIENITPITLQEITGTAYS 734
Query: 1441 EKWKAKVIYGDTD 1453
+VIYGDTD
Sbjct: 735 MSGTFQVIYGDTD 747
>gi|9629560|ref|NP_044849.1| DNA polymerase catalytic subunit [Murid herpesvirus 4]
gi|6625576|gb|AAF19277.1|AF105037_9 9 [murid herpesvirus 4]
gi|13249151|gb|AAK16702.1|AF324455_6 DNA polymerase catalytic subunit; involved in DNA replication [Murid
herpesvirus 4]
gi|2317930|gb|AAB66388.1| DNA polymerase [murid herpesvirus 4]
Length = 1027
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 204/479 (42%), Gaps = 74/479 (15%)
Query: 1004 CKSESHQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLG 1057
C + S + L + C +V+ C E L F+ + + + G++I L
Sbjct: 323 CATNSISKLLFSLGTCDPIEGTEVYECPSEYDLLMAFLIFMRDSGVEFISGYNIANFDLP 382
Query: 1058 FLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIE 1117
++ +RA + I + V + + I
Sbjct: 383 YIIDRATQI--------------------------YNIDCTQFTKLVTMRTFEVRKPIDS 416
Query: 1118 DEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWF 1177
+ + + G I ++++ + + ++ L+ Y + VA+ L + + ++ + F
Sbjct: 417 GAGFMRAQTKIRISGVIPVDMYTVCKDKLSLSDYKLNTVAKHCLNMEKEDVSYKDIPILF 476
Query: 1178 ASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVE 1236
GP GRA+ Y V ++L L+++ +E+ ++ I VL+ G Q RV
Sbjct: 477 KEGPTGRAKIG--TYCVMDSQLVLDLLKYFMAHIEIAEIGKLAKIPVRRVLTDGQQIRVF 534
Query: 1237 SMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMI 1296
S LL A +NY I P N S + V++P +GFY PV+V+DF SLYPS++
Sbjct: 535 SSLLDAARRENY--ILPSNQAKCSNSGYQG-ATVIDPITGFYNTPVLVVDFASLYPSIIQ 591
Query: 1297 AYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK----DELLIPPNGVMYVPPKVRK 1352
A+NLC+ T I+P + L + +L + +P V +V +
Sbjct: 592 AHNLCYST----IIPDNK-----------LQMFPNLTPADYETFTLPSGTVHFVKKHKKC 636
Query: 1353 GVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGR 1412
+L RLL + L+ R ++ + A I I + +QLA+K+ N YG+T SG
Sbjct: 637 SLLSRLLTKWLAKRKEIRTQLA--ACEDPITKTILDKQQLAIKVTCNSVYGFTGVA-SGM 693
Query: 1413 MPCAELADSIVQCGRSTLEKAISFVNE--------------NEKWKAKVIYGDTDRYTV 1457
+PC ++A++I GR LEK+ +++ N +VIYGDTD V
Sbjct: 694 LPCLQIAETITFQGRKMLEKSRAYIENMSSATLGALMHKTYNPDAYFRVIYGDTDSLFV 752
>gi|432102591|gb|ELK30158.1| DNA polymerase delta catalytic subunit [Myotis davidii]
Length = 852
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 128/245 (52%), Gaps = 30/245 (12%)
Query: 1179 SGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
+G + R R Y + A L L ++ +L ++ E+ARV G+ +L+RG Q +V S
Sbjct: 282 NGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTGVPLGYLLTRGQQVKVVSQ 341
Query: 1239 LLRLAHTQNYL---AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMM 1295
LLR A + L + G V+EP G+Y P+ LDF SLYPS+M
Sbjct: 342 LLRQAMREGLLMPVVKTEGGEDYTGA-------TVIEPLKGYYDVPITTLDFSSLYPSIM 394
Query: 1296 IAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVL 1355
+A+NLC+ T L P LG++ +D+ + P G +V VRKG+L
Sbjct: 395 MAHNLCYTTLLR---PGAAQKLGLT------------EDQFIKTPTGDEFVKTSVRKGLL 439
Query: 1356 PRLLEEILSTRIMVKQAIKKLAPSQQILHR-IFNARQLALKLIANVTYGYTAAGFSGRMP 1414
P++LE +LS R K+A +LA L R + + RQLALK+ AN YG+T A G++P
Sbjct: 440 PQILENLLSAR---KRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLP 495
Query: 1415 CAELA 1419
C E++
Sbjct: 496 CLEIS 500
>gi|5881329|gb|AAD55134.1|AF181249_1 DNA-dependent DNA polymerase [Bovine herpesvirus 2]
Length = 1211
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/510 (23%), Positives = 217/510 (42%), Gaps = 115/510 (22%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G+P+ V E + F L + P+ + G++I FL I L D+
Sbjct: 436 GLPEPLVLEFDSEFEMLLAFFTFLKQYGPEFVTGYNIINFDWPFL--------ITKLTDV 487
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRI 1134
+ PL+ G + RG+ + ++ K+ I+ + G +
Sbjct: 488 YKVPLD-----GYGRANARGV----FRVWDIGQNSFQKNNKIK------------INGVV 526
Query: 1135 VLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP---GRARYRCVEY 1191
++++ + R +VKL+ Y + AVAE VL + + ++ + +++ASGP G C++
Sbjct: 527 NIDMYAIAREKVKLSSYKLNAVAEAVLDDRKKDLDYKDIPRYYASGPELRGVIGEYCIQD 586
Query: 1192 VVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI 1251
+ +L + + L++ S +AR+ GI + G Q RV + LLRLA + ++
Sbjct: 587 SLLVGRLFFKFLPHLEL----SAVARLAGIGLTRAIYDGQQIRVYTCLLRLAGEKGFILP 642
Query: 1252 SPGNHQVASQPAM---------ECL--------------PL------------------- 1269
A + A ECL P+
Sbjct: 643 DSRRQGAAIEAAAPDQPGDATDECLDGDVEEENDEEAERPVADAGSRPSGGRHVGYQGAK 702
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVL 1329
V++P +GF+ PVVV DF SLYPS++ A+NLCF T + E G+ + R +
Sbjct: 703 VLDPVAGFHVSPVVVFDFASLYPSIIQAHNLCFST----LALDAEAVGGLEAGRDYM--- 755
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNA 1389
E+ + + V +V VR+ +L LL + L+ R ++ I AP + +L +
Sbjct: 756 -----EITVGGDTVYFVKAHVRESLLSILLRDWLAMRKQIRAHIPSSAPEEAVL---LDK 807
Query: 1390 RQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL--------EKAISF----- 1436
+Q A+K++ N YG+T G +PC +A ++ GR L + +SF
Sbjct: 808 QQAAIKVVCNSVYGFTGVQ-RGLLPCLPVAATVTTIGRDMLLATRDYVHSRWVSFDGLVM 866
Query: 1437 -------VNENEKWKAKVIYGDTDR-YTVC 1458
+ ++ ++IYGDTD + +C
Sbjct: 867 DFPEAAAIRGEGEYSMRIIYGDTDSVFVLC 896
>gi|156144449|gb|ABU52895.1| DNA polymerase [Macaca fascicularis rhadinovirus 2]
Length = 749
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 205/469 (43%), Gaps = 78/469 (16%)
Query: 990 NDSDHAVEIYVLLYCKSESHQRS-----LVG----IPDCKVFVCSKEIHLFSHFIKILCS 1040
D D ++I + Y E VG IPD V E + F +L
Sbjct: 312 RDGDAVIQISCVFYTTKEGAPNPPNILFSVGTCDPIPDTDVLEFPSEYDMLVSFFAMLRD 371
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGD-SEISE-RGITDN 1098
F+ D L G++I L +L RA+ + LN+ + KI G E+ E RG
Sbjct: 372 FEVDFLTGYNISNFDLPYLITRASQVYNLRLNEYT------KIKTGSIFEVHEPRGGGGG 425
Query: 1099 MLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAE 1158
+ S + + G + ++++++ R ++ L+ Y ++ VA
Sbjct: 426 FMRS----------------------VSKIKIAGIVPIDMYQVCREKLSLSDYKLDTVAR 463
Query: 1159 TVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARV 1218
L K + ++ + F SG R + Y V + L + ++ + SE+A++
Sbjct: 464 QCLGGKKEDVSYKDIPPLFRSGSA-GRAKVGSYCVMDSVLVMNLLKMFMIHVEISEIAKL 522
Query: 1219 FGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-----GNHQVASQPAMECLPLVMEP 1273
I VL+ G Q RV S LL A +N++ P G +Q A+ V+ P
Sbjct: 523 AKIQARRVLTDGQQLRVFSCLLEAAARENFILPVPTPEGQGGYQGAT---------VINP 573
Query: 1274 ESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL-GKILPSKENTLGVSSFRPDLHVLRDL 1332
GFY +PV+V+DF SLYPS++ A+NLC+ T + G+ DLH+ L
Sbjct: 574 IPGFYDEPVLVVDFASLYPSIIQAHNLCYSTMIHGR----------------DLHLHPTL 617
Query: 1333 K----DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
+ ++ V +V R+ +L RLL L R +++ + A L I +
Sbjct: 618 TPDDYETFVLSGGPVHFVKKHKRESLLGRLLTVWLEKRRAIRRTLA--ACDDPSLKTILD 675
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
+QLA+K+ N YG+T SG +PC +A+++ GR+ LE + S+V
Sbjct: 676 KQQLAIKVTCNAVYGFTGVA-SGLLPCINIAETVTLRGRTMLEMSKSYV 723
>gi|386089546|gb|AFI98930.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 127/531 (23%), Positives = 220/531 (41%), Gaps = 136/531 (25%)
Query: 1007 ESHQRSLV--GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
ESH L G+P V E + F+ ++ + P+ + G++I FL +
Sbjct: 421 ESHLNELAARGLPTPVVLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFLLAK-- 478
Query: 1065 HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
L DI + PL+ G ++ RG+ + G++H
Sbjct: 479 ------LTDIYKVPLD-----GYGRMNGRGVFRVW-------------------DIGQSH 508
Query: 1125 ---ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
S + V G + ++++ ++ ++KL+ Y + AVAE VL+ K + +R + ++A+GP
Sbjct: 509 FQKRSKIKVNGMVNIDMYGIITDKIKLSSYKLNAVAEAVLKDKKKDLSYRDIPAYYAAGP 568
Query: 1182 ---GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
G C++ + +L + + L++ S +AR+ GI+ + G Q RV +
Sbjct: 569 AQRGVIGEYCIQDSLLVGQLFFKFLPHLEL----SAVARLAGINITRTIYDGQQIRVFTC 624
Query: 1239 LLRLAHTQNYL---------------------------------------------AISP 1253
LLRLA + ++
Sbjct: 625 LLRLADQKGFILPDTQGRFRGAGGEAPKRPAAAREDEERPEEEGEDEDEREEGGGEREPA 684
Query: 1254 GNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSK 1313
G + A + V++P SGF+ +PVVV DF SLYPS++ A+NLCF T
Sbjct: 685 GARETAGRHVGYQGARVLDPTSGFHVNPVVVFDFASLYPSIIQAHNLCFSTL-------- 736
Query: 1314 ENTLGVSSFRPD-LHVLRDLKDELLIPPNG--VMYVPPKVRKGVLPRLLEEILSTRIMVK 1370
S R D + L KD L I G + +V VR+ +L LL + L+ R ++
Sbjct: 737 -------SLRADAVAHLEAGKDYLEIEVGGRRLFFVKAHVRESLLSILLRDWLAMRKQIR 789
Query: 1371 QAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1430
I + +P + +L + +Q A+K++ N YG+T G +PC +A ++ GR L
Sbjct: 790 SRIPQSSPEEAVL---LDKQQAAIKVVCNSVYGFTGVQ-HGLLPCLHVAATVTTIGREML 845
Query: 1431 EKAISFVNENEKWKA----------------------KVIYGDTDR-YTVC 1458
+V + +W A ++IYGDTD + +C
Sbjct: 846 LATREYV--HARWAAFEQLLADFPEAADMRAPGPYSMRIIYGDTDSIFVLC 894
>gi|343963263|gb|AEM72555.1| U38 [Elephant endotheliotropic herpesvirus 6]
Length = 832
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 200/469 (42%), Gaps = 84/469 (17%)
Query: 1012 SLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLL 1071
S IP+ ++ C+ E L F+ + + P+ + G++I + ++ R + I
Sbjct: 370 SCAEIPEVYIYECASEYELIEAFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNI--- 426
Query: 1072 NDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVG 1131
G +RG +E + R + +
Sbjct: 427 ------------PCGTFTKMKRGRMTCFKG--------------MESFFNRCQCK-VTMS 459
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR---VLTKWFASGPGRARYRC 1188
G ++++++R+ +V + ++ + + +L K S+ ++ VL + +G G C
Sbjct: 460 GIVIIDMYRVCMDKVSAPNHKLDTIVDMLLGEKKHSVSYKQIPVLFRKDDAGRGVVGAYC 519
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
V V KL +++ + S +AR+ I V+ G Q R+ + +L A ++
Sbjct: 520 VHDSVLVHKLFCKMLFHYE----ASAIARLSNISMNKVVFDGQQSRIFACMLAAARKED- 574
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
I P + V+EP++GFY PV V DF SLYPS++ AYNLC+CT
Sbjct: 575 -LIIPSIDEAGEDTYQG--ATVLEPKTGFYNTPVAVFDFASLYPSIIQAYNLCYCT---- 627
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVM---YVPPKVRKGVLPRLLEEILST 1365
L + +N ++S R D D ++ N +V P +RK +L +LL L+
Sbjct: 628 -LVTDDN---LTSLRED--------DVTVVTTNTGRVHKFVKPHIRKSILSQLLTSWLAE 675
Query: 1366 RIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
R V++ +K ++H + + +QLALKL N YG+T G PC +A+S+
Sbjct: 676 RKAVREKLKHC--KDPLMHILLDKQQLALKLTCNAVYGFTGVS-KGMFPCLPIAESVTAQ 732
Query: 1426 GRSTLEKAISFVNE---------------------NEKWKAKVIYGDTD 1453
GR L ++ E +EK+K V+YGDTD
Sbjct: 733 GRQLLAITKQYICERFNDWTFLTQIAPALVDCKIDHEKFKIDVVYGDTD 781
>gi|305387209|gb|ADM52127.1| DNA polymerase [Human herpesvirus 2]
Length = 1236
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 130/535 (24%), Positives = 220/535 (41%), Gaps = 144/535 (26%)
Query: 1007 ESHQRSLV--GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
ESH L G+P V E + F+ + + P+ + G++I F+ +
Sbjct: 422 ESHLSDLASRGLPAPVVLEFDSEFEMLLAFMTFVKQYGPEFVTGYNIINFDWPFVLTK-- 479
Query: 1065 HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
L +I + PL+ G ++ RG+ + G++H
Sbjct: 480 ------LTEIYKVPLD-----GYGRMNGRGVFRVW-------------------DIGQSH 509
Query: 1125 ---ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
S + V G + ++++ ++ +VKL+ Y + AVAE VL+ K + +R + ++ASGP
Sbjct: 510 FQKRSKIKVNGMVNIDMYGIITDKVKLSSYKLNAVAEAVLKDKKKDLSYRDIPAYYASGP 569
Query: 1182 ---GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
G CV+ + +L + + L++ S +AR+ GI+ + G Q RV +
Sbjct: 570 AQRGVIGEYCVQDSLLVGQLFFKFLPHLEL----SAVARLAGINITRTIYDGQQIRVFTC 625
Query: 1239 LLRLAHTQNYL------------------------------------------------- 1249
LLRLA + ++
Sbjct: 626 LLRLAGQKGFILPDTQGRFRGLDKEAPKRPAVPRGEGERPGDGNGDEDKDDDEDGDEREE 685
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
A G V Q A V++P SGF+ DPVVV DF SLYPS++ A+NLCF T
Sbjct: 686 VARETGGRHVGYQGAR-----VLDPTSGFHVDPVVVFDFASLYPSIIQAHNLCFSTL--- 737
Query: 1309 ILPSKENTLGVSSFRPD--LHVLRDLKDELLIPPNG--VMYVPPKVRKGVLPRLLEEILS 1364
S RP+ H+ D +D L I G + +V VR+ +L LL + L+
Sbjct: 738 ------------SLRPEAVAHLEAD-RDYLEIEVGGRRLFFVKAHVRESLLSILLRDWLA 784
Query: 1365 TRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
R ++ I + P + +L + +Q A+K++ N YG+T G +PC +A ++
Sbjct: 785 MRKQIRSRIPQSTPEEAVL---LDKQQAAIKVVCNSVYGFTGVQ-HGLLPCLHVAATVTT 840
Query: 1425 CGRSTLEKAISFVNENEK--------------------WKAKVIYGDTDR-YTVC 1458
GR L ++V+ + ++IYGDTD + +C
Sbjct: 841 IGREMLLATRAYVHARWAEFDQLLADFPEAAGMRAPGPYSMRIIYGDTDSIFVLC 895
>gi|172041767|gb|AAN35123.2| DNA polymerase [Saimiri sciureus gammaherpesvirus 2]
Length = 746
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 212/456 (46%), Gaps = 63/456 (13%)
Query: 991 DSDHAVEIYVLLYCKSESHQRSL---VG----IPDCKVFVCSKEIHLFSHFIKILCSFDP 1043
+SD ++I +L+ ES + L VG IP V+ E + F +L D
Sbjct: 311 ESDLIIQISCILWSVGESEPKKLLLSVGTCNMIPGSVVYEFPSEYDMLVGFFTLLRDGDV 370
Query: 1044 DILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEP 1103
D + G++I + +L +RA H+ D+ + SK+ G E
Sbjct: 371 DFMTGYNIANFDMPYLIDRATHI---YNIDVCKY---SKVMGG------------AFFEV 412
Query: 1104 VVAESLLAKDAIIEDEWGRTHA-SGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
S + G + A S + + G + ++++ ++R ++ L+ Y ++ VA L
Sbjct: 413 KFPSSCMGT--------GFSRAFSKIRISGIVAIDMYLVIRDKLSLSDYKLDTVACHCLG 464
Query: 1163 RKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGID 1222
+ + ++ + F SGP R + +Y + + L LE++ SE+A++ +
Sbjct: 465 SQKDDVSYKEIPTLFRSGPA-GRAKVGQYCIVDSVLVLELLKHFVTHVEISEIAKLARLP 523
Query: 1223 FFSVLSRGSQYRVESMLLRLAHTQNYLAISP-----GNHQVASQPAMECLPLVMEPESGF 1277
VL+ G Q RV + LL A +NY+ P G +Q AS V+ P SGF
Sbjct: 524 ARCVLTDGQQVRVFTCLLEAAKRENYILPVPKKAELGGYQGAS---------VINPLSGF 574
Query: 1278 YADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELL 1337
Y PV+V+DF SLYPS++ A+NLC+ T ++P ++ ++ F PDL +
Sbjct: 575 YNTPVLVVDFASLYPSIIQAHNLCYST----MIPHEK----LAEF-PDL--CPGDYETFH 623
Query: 1338 IPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLI 1397
+ V +V K +L +LL L+ R +K+ + + + I + +QLA+K+
Sbjct: 624 LASGTVHFVKEHKAKSLLSKLLTAWLNKRKAIKRTMADCL--DETMRTILDKQQLAIKVT 681
Query: 1398 ANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKA 1433
N YG+T +G +PC ++A+++ GR+ LEK
Sbjct: 682 CNSVYGFTGVS-TGILPCIKIAETVTFQGRAMLEKT 716
>gi|73669283|ref|YP_305298.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
gi|72396445|gb|AAZ70718.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
Length = 932
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 205/423 (48%), Gaps = 65/423 (15%)
Query: 1021 VFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLE 1080
V+ + E + + F +I C +DPDI++G++ Q + ++ +R L
Sbjct: 247 VWSYTDETEMLNKFFEIFCDYDPDIVIGYNHQDFDIPYITDRVKTL-------------- 292
Query: 1081 SKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWR 1140
++ G+S PVV I ++G + + GR+V++
Sbjct: 293 --VSEGNS------------INPVVGRD---GSKIGYRKFGLITRTEMK--GRVVVDALP 333
Query: 1141 LMRGEVKLNMYTVEAVAETVL-RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLN 1199
L+R L YT+ AV++ +L R K+ P + W +G ++ V+Y A+L
Sbjct: 334 LVRRAFSLKQYTLRAVSKELLSREKLDVPPLEMEEYWLDTGEKFKKF--VDYSRRDAELA 391
Query: 1200 LEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVA 1259
LE++ L ++++ LA+V G V+ G VE++LL+ ++ + + + V+
Sbjct: 392 LELILNLRLLDKYVALAQVSGSLLQEVVDGGQTSMVETLLLKEFGLRDRVLLPKPDDGVS 451
Query: 1260 SQPAMECLPL----VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
++ L V+EP+ G + V++LD++SLYP++M+A+NLC+ T + + +
Sbjct: 452 AERYAMSSDLKGGEVLEPKKGLLEN-VLILDYKSLYPTIMMAHNLCYTTVV-----TGDK 505
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKK 1375
+ GV+ + PP+G +VP +V KG++P +LE++L+ R K+ ++
Sbjct: 506 SDGVT----------------IRPPSGGEFVPSEVFKGIVPSILEDLLNKRTQTKKRMR- 548
Query: 1376 LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAIS 1435
S + +R+ +A QLALK++ N YGY+ R+ LA+++ GRS +
Sbjct: 549 -GTSNENEYRVLDATQLALKILLNSFYGYSGYA-RARLYSLTLANAVTSFGRSNILNTRE 606
Query: 1436 FVN 1438
+N
Sbjct: 607 IIN 609
>gi|6469146|emb|CAB61753.1| DNA polymerase [Chlorocebus rhadinovirus 1]
Length = 600
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 194/419 (46%), Gaps = 59/419 (14%)
Query: 1027 EIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHL-GIGLLNDISRTPLESKIAA 1085
E + + F +L +D + L G++I L ++ RA + I L N +KI
Sbjct: 208 EYDMLTAFFAMLRDYDVEFLTGYNIANFDLPYIITRATQVYNIDLKN-------FTKIKT 260
Query: 1086 GDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGE 1145
G + E V E + + S + + G ++++++ R +
Sbjct: 261 G--SVFE------------VHEPTGGGGGFLRSQ------SKVKISGIAPIDMYQVCRDK 300
Query: 1146 VKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQ 1205
+ L+ Y ++ VA+ L ++ I +R + F SG R + Y + + L ++++
Sbjct: 301 LSLSDYKLDTVAKKCLGKQKDDISYRDIPPLFRSGAA-GRAKIGRYCIIDSVLVMDLLRM 359
Query: 1206 LDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-----GNHQVAS 1260
+E+AR+ I VL+ G Q RV S LL A + Y+ P G +Q A+
Sbjct: 360 FQTHVEIAEIARLAKIPTRRVLTDGQQIRVFSCLLEAAAKEGYILPVPRGDATGGYQGAT 419
Query: 1261 QPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK-ILPSKENTLGV 1319
V+ P GFY DPV+V+DF SLYPS++ A+NLC+ T + + LP+
Sbjct: 420 ---------VISPIPGFYDDPVLVVDFASLYPSIIQAHNLCYSTLIPQGALPAHPE---- 466
Query: 1320 SSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPS 1379
RPD + + ++ V +V VR+ +L +LL LS R +++ + A
Sbjct: 467 --LRPDDY------ETFVLSEGPVHFVKKHVRESLLSKLLATWLSKRKDIRRTLASCA-- 516
Query: 1380 QQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN 1438
+ I + +QLA+K+ N YG+T SG +PC +A+++ GR LE++ +FV
Sbjct: 517 DPTMRTILDKQQLAIKVTCNAVYGFTGVA-SGILPCLNIAETVTLQGRKMLERSQAFVE 574
>gi|305387318|gb|ADM52174.1| DNA polymerase [Human herpesvirus 2]
Length = 1236
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 130/535 (24%), Positives = 220/535 (41%), Gaps = 144/535 (26%)
Query: 1007 ESHQRSLV--GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
ESH L G+P V E + F+ + + P+ + G++I F+ +
Sbjct: 422 ESHLSDLASRGLPAPVVLEFDSEFEMLLAFMTFVKQYGPEFVTGYNIINFDWPFVLTK-- 479
Query: 1065 HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
L +I + PL+ G ++ RG+ + G++H
Sbjct: 480 ------LTEIYKVPLD-----GYGRMNGRGVFRVW-------------------DIGQSH 509
Query: 1125 ---ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
S + V G + ++++ ++ +VKL+ Y + AVAE VL+ K + +R + ++ASGP
Sbjct: 510 FQKRSKIKVNGMVNIDMYGIITDKVKLSSYKLNAVAEAVLKDKKKDLSYRDIPAYYASGP 569
Query: 1182 ---GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
G CV+ + +L + + L++ S +AR+ GI+ + G Q RV +
Sbjct: 570 AQRGVIGEYCVQDSLLVGQLFFKFLPHLEL----SAVARLAGINITRTIYDGQQIRVFTC 625
Query: 1239 LLRLAHTQNYL------------------------------------------------- 1249
LLRLA + ++
Sbjct: 626 LLRLAGQKGFILPDTQGRFRGLDKEAPKRPAVPRGEGERPGDGNGDEDKDDDEDGDEREE 685
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
A G V Q A V++P SGF+ DPVVV DF SLYPS++ A+NLCF T
Sbjct: 686 VARETGGRHVGYQGAR-----VLDPTSGFHVDPVVVFDFASLYPSIIQAHNLCFSTL--- 737
Query: 1309 ILPSKENTLGVSSFRPD--LHVLRDLKDELLIPPNG--VMYVPPKVRKGVLPRLLEEILS 1364
S RP+ H+ D +D L I G + +V VR+ +L LL + L+
Sbjct: 738 ------------SLRPEAVAHLEAD-RDYLEIEVGGRRLFFVKAHVRESLLSILLRDWLA 784
Query: 1365 TRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
R ++ I + P + +L + +Q A+K++ N YG+T G +PC +A ++
Sbjct: 785 MRKQIRSRIPQSTPEEAVL---LDKQQAAIKVVCNSVYGFTGVQ-HGLLPCLHVAATVTT 840
Query: 1425 CGRSTLEKAISFVNENEK--------------------WKAKVIYGDTDR-YTVC 1458
GR L ++V+ + ++IYGDTD + +C
Sbjct: 841 IGREMLLATRAYVHARWAEFDQLLADFPEAAGMRAPGPYSMRIIYGDTDSIFVLC 895
>gi|261343331|gb|ACX70157.1| DNA polymerase [Pan troglodytes rhadinovirus 3]
Length = 753
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 206/462 (44%), Gaps = 64/462 (13%)
Query: 990 NDSDHAVEIYVLLYCKSES--HQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSF 1041
D D ++I +L+ + + R L+ + C ++F E L + F+ +L
Sbjct: 316 QDEDVIIQISCVLHTVGDEGPYTRILLSLGTCDPLDGVEIFEFPSEYDLLTAFLAMLRDH 375
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLA 1101
D + + G++I L ++ RA + L D ++ S G
Sbjct: 376 DVEFITGYNIANFDLPYIMARATQVYNIKLQDFTKVKTGSVFEVHQPRGGNGG------- 428
Query: 1102 EPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
S L S + + G + ++++++ + ++ L+ Y ++ VA+ L
Sbjct: 429 ------SFLRSQ------------SKVRISGIVPIDMYQVCKDKLSLSDYKLDTVAQKCL 470
Query: 1162 RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
R+ I ++ + F SGP R + Y V + L ++I+ + SE+A++ I
Sbjct: 471 GRQKDDISYKDIPPLFRSGPA-GRAKVGRYCVIDSVLVMDILRRFQTHVEISEIAKLAKI 529
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNY-LAISPGNHQVASQPAMECLPLVMEPESGFYAD 1280
VL+ G Q R+ S LL A + Y L + G+ Q A V+ P GFY D
Sbjct: 530 PTRRVLTDGQQLRIFSCLLEAATREGYILPVPKGDVASGYQGAT-----VINPVPGFYDD 584
Query: 1281 PVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLK----DEL 1336
PV+V+DF SLYPS++ A+NLC+ T ++P LH+ L+ +
Sbjct: 585 PVLVVDFASLYPSIIQAHNLCYST----LIPGDA-----------LHLHPHLEPQDYETF 629
Query: 1337 LIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQ-ILHRIFNARQLALK 1395
+ V +V +R+ +L +LL L+ R KQ LA + L I + +QLA+K
Sbjct: 630 YLSSGPVHFVKKHIRESLLAKLLTIWLTKR---KQIRVTLASCEDPTLRTILDKQQLAIK 686
Query: 1396 LIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
+ N YG+T +G +PC +A+++ GR LE + SFV
Sbjct: 687 VTCNSVYGFTGVA-TGILPCLNIAETVTLQGRRMLEMSQSFV 727
>gi|38201798|gb|AAO46909.1| DNA polymerase [Sus barbatus lymphotropic herpesvirus 1]
Length = 1000
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 209/464 (45%), Gaps = 79/464 (17%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
IP+ K++ E+ + F ++ FD +I+ G++I ++ RA N I
Sbjct: 334 IPNTKIYQFPSELDMLYAFCSMIRDFDIEIVTGYNIANFDFPYILHRA--------NVIY 385
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
ES I + + +P KD + R++ + + + G +V
Sbjct: 386 NMKAESYTRTKSGSIFQ-------VHKP--------KDG----NFLRSN-TKVKISGLVV 425
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++++ + + ++ L+ Y + VA+ + K + ++ + F G R R Y V
Sbjct: 426 IDMYMISKEKLSLSNYKLNTVAKECVGEKKEDVSYKEIPALF-KGSANDRARLGLYCVQD 484
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY-LAISPG 1254
+ L ++++ SE+A++ I V++ G Q RV S LL A ++ Y L +S
Sbjct: 485 SILVMDLLKYFMTHVEISEIAKIANIPMRRVITDGQQIRVFSCLLASAKSRGYILPVSQT 544
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ Q A V+ P SGFY PV+V+DF SLYPS++ A+NLC+ T +
Sbjct: 545 ANFEGYQGAT-----VISPLSGFYNTPVLVVDFASLYPSIIQAHNLCYSTLIH------- 592
Query: 1315 NTLGVSSFRPDLHVLRDLKD---ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
DLH LK+ E + +G ++ V+K + LL +L+T + ++
Sbjct: 593 --------HEDLHKHPQLKESDYETFVISSGPVHF---VKKHISESLLSNLLTTWLAKRK 641
Query: 1372 AIKK--LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
I+K A + L I + +QLA+K+ N YG+T SG +PC ++A+++ GR+
Sbjct: 642 TIRKELAACNDPKLKTILDKQQLAIKVTCNAVYGFTGVA-SGMLPCLKIAETVTTQGRAM 700
Query: 1430 LEKAISFVN--------------------ENEKWKAKVIYGDTD 1453
LEK FV ++ KV+YGDTD
Sbjct: 701 LEKTKIFVENLNHTMLQAICYPLDIPLLPKDVTMPFKVVYGDTD 744
>gi|305387245|gb|ADM52145.1| DNA polymerase [Human herpesvirus 2]
Length = 1237
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 130/536 (24%), Positives = 220/536 (41%), Gaps = 145/536 (27%)
Query: 1007 ESHQRSLV--GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
ESH L G+P V E + F+ + + P+ + G++I F+ +
Sbjct: 422 ESHLSDLASRGLPAPVVLEFDSEFEMLLAFMTFVKQYGPEFVTGYNIINFDWPFVLTK-- 479
Query: 1065 HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
L +I + PL+ G ++ RG+ + G++H
Sbjct: 480 ------LTEIYKVPLD-----GYGRMNGRGVFRVW-------------------DIGQSH 509
Query: 1125 ---ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
S + V G + ++++ ++ +VKL+ Y + AVAE VL+ K + +R + ++ASGP
Sbjct: 510 FQKRSKIKVNGMVNIDMYGIITDKVKLSSYKLNAVAEAVLKDKKKDLSYRDIPAYYASGP 569
Query: 1182 ---GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
G CV+ + +L + + L++ S +AR+ GI+ + G Q RV +
Sbjct: 570 AQRGVIGEYCVQDSLLVGQLFFKFLPHLEL----SAVARLAGINITRTIYDGQQIRVFTC 625
Query: 1239 LLRLAHTQNYL------------------------------------------------- 1249
LLRLA + ++
Sbjct: 626 LLRLAGQKGFILPDTQGRFRGLDKEAPKRPAVPRGEGERPGDGNGDEDKDGRDKDGDERE 685
Query: 1250 --AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLG 1307
A G V Q A V++P SGF+ DPVVV DF SLYPS++ A+NLCF T
Sbjct: 686 EVARETGGRHVGYQGAR-----VLDPTSGFHVDPVVVFDFASLYPSIIQAHNLCFSTL-- 738
Query: 1308 KILPSKENTLGVSSFRPD--LHVLRDLKDELLIPPNG--VMYVPPKVRKGVLPRLLEEIL 1363
S RP+ H+ D +D L I G + +V VR+ +L LL + L
Sbjct: 739 -------------SLRPEAVAHLEAD-RDYLEIEVGGRRLFFVKAHVRESLLSILLRDWL 784
Query: 1364 STRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIV 1423
+ R ++ I + P + +L + +Q A+K++ N YG+T G +PC +A ++
Sbjct: 785 AMRKQIRSRIPQSTPEEAVL---LDKQQAAIKVVCNSVYGFTGVQ-HGLLPCLHVAATVT 840
Query: 1424 QCGRSTLEKAISFVNENEK--------------------WKAKVIYGDTDR-YTVC 1458
GR L ++V+ + ++IYGDTD + +C
Sbjct: 841 TIGREMLLATRAYVHARWAEFDQLLADFPEAAGMRAPGPYSMRIIYGDTDSIFVLC 896
>gi|305387205|gb|ADM52125.1| DNA polymerase [Human herpesvirus 2]
Length = 1236
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 130/535 (24%), Positives = 220/535 (41%), Gaps = 144/535 (26%)
Query: 1007 ESHQRSLV--GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
ESH L G+P V E + F+ + + P+ + G++I F+ +
Sbjct: 422 ESHLSDLASRGLPAPVVLEFDSEFEMLLAFMTFVKQYGPEFVTGYNIINFDWPFVLTK-- 479
Query: 1065 HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
L +I + PL+ G ++ RG+ + G++H
Sbjct: 480 ------LTEIYKVPLD-----GYGRMNGRGVFRVW-------------------DIGQSH 509
Query: 1125 ---ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
S + V G + ++++ ++ +VKL+ Y + AVAE VL+ K + +R + ++ASGP
Sbjct: 510 FQKRSKIKVNGMVNIDMYGIITDKVKLSSYKLNAVAEAVLKDKKKDLSYRDIPAYYASGP 569
Query: 1182 ---GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
G CV+ + +L + + L++ S +AR+ GI+ + G Q RV +
Sbjct: 570 AQRGVIGEYCVQDSLLVGQLFFKFLPHLEL----SAVARLAGINITRTIYDGQQIRVFTC 625
Query: 1239 LLRLAHTQNYL------------------------------------------------- 1249
LLRLA + ++
Sbjct: 626 LLRLAGQKGFILPDTQGRFRGLDKEAPKRPAVPRGEGERPGDGNGDEDKDDDEDGDEREE 685
Query: 1250 -AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
A G V Q A V++P SGF+ DPVVV DF SLYPS++ A+NLCF T
Sbjct: 686 VARETGGRHVGYQGAR-----VLDPTSGFHVDPVVVFDFASLYPSIIQAHNLCFSTL--- 737
Query: 1309 ILPSKENTLGVSSFRPD--LHVLRDLKDELLIPPNG--VMYVPPKVRKGVLPRLLEEILS 1364
S RP+ H+ D +D L I G + +V VR+ +L LL + L+
Sbjct: 738 ------------SLRPEAVAHLEAD-RDYLEIEVGGRRLFFVKAHVRESLLSILLRDWLA 784
Query: 1365 TRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQ 1424
R ++ I + P + +L + +Q A+K++ N YG+T G +PC +A ++
Sbjct: 785 MRKQIRSRIPQSPPEEAVL---LDKQQAAIKVVCNSVYGFTGVQ-HGLLPCLHVAATVTT 840
Query: 1425 CGRSTLEKAISFVNENEK--------------------WKAKVIYGDTDR-YTVC 1458
GR L ++V+ + ++IYGDTD + +C
Sbjct: 841 IGREMLLATRAYVHARWAEFDQLLADFPEAAGMRAPGPYSMRIIYGDTDSIFVLC 895
>gi|389568573|gb|AFK85010.1| DNA polymerase [Rhinolophus ferrumequinum herpesvirus 1]
Length = 1014
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 197/465 (42%), Gaps = 91/465 (19%)
Query: 1022 FVCSKEIHL-FSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA---HLGIGLLNDISRT 1077
F C ++ + F F+KI P+IL G++I L ++ R ++ +G + +
Sbjct: 338 FPCEYDLLMGFCIFLKI---GSPEILTGYNINNFDLQYICTRMTKIYNVDMGEFTKLKQG 394
Query: 1078 PLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLN 1137
+ I E +R T+N + + + G + ++
Sbjct: 395 RFYTYIPF---ETHKRSFTNNQ--------------------------TKVFISGILCID 425
Query: 1138 VWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAK 1197
++ + ++ Y ++ VA L R+ +P+R + + F S R R +Y V A
Sbjct: 426 MYPVCVSKISSPDYKLDTVARLYLNRRKEDMPYREIPREFVSN-SFGRSRVGKYCVQDAT 484
Query: 1198 LNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQN----YLA--I 1251
L +++ L+ +E+AR+ I + G Q R+ S +L A + Y+A
Sbjct: 485 LVMDLFITLNFHIEIAEIARLAHIVIRRAIFDGQQKRIISCILHKAKDRRMIVPYIAPQT 544
Query: 1252 SPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILP 1311
P V + A V++P+ G+YA PVVV DF SLYPS+M+A+NLC+ T +
Sbjct: 545 GPDGRDVGYKGAT-----VLDPDVGYYASPVVVFDFASLYPSIMMAHNLCYSTLVF---- 595
Query: 1312 SKENTLGVSSFRPDLHVLRDLK--DELLIPPNGV--MYVPPKVRKGVLPRLLEEILSTRI 1367
D +R L D + NG+ YV VRK +L LL E L+ R
Sbjct: 596 -------------DTQRVRHLSGDDTFTVGVNGIEYTYVKAHVRKSILSDLLTEWLAERK 642
Query: 1368 MVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR 1427
VK A++ + L I + +Q ALK+ N YG T A G +PC +A S+ GR
Sbjct: 643 RVKAAMEVCTDPRMKL--ILDKKQWALKVTCNAVYGVTGA-MHGMLPCLAIASSVTYLGR 699
Query: 1428 STLEKAISFVNENEKWK-------------------AKVIYGDTD 1453
L ++N + K +VIYGDTD
Sbjct: 700 EMLCATTRYINTEMQSKEFFKDRFGLSDEDFTGELRVRVIYGDTD 744
>gi|27452795|gb|AAO12301.1| DNA polymerase [Porcine lymphotropic herpesvirus 3]
gi|27452810|gb|AAO12315.1| DNA polymerase [Porcine lymphotropic herpesvirus 3]
Length = 1001
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 209/464 (45%), Gaps = 79/464 (17%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
IP+ K++ E+ + F ++ FD +I+ G++I ++ RA N I
Sbjct: 335 IPNTKIYQFPSELDMLYAFCSMIRDFDIEIVTGYNIANFDFPYILHRA--------NVIY 386
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
ES I + + +P KD + R++ + + + G +V
Sbjct: 387 NMKAESYTRTKSGSIFQ-------VHKP--------KDG----NFLRSN-TKVKISGLVV 426
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++++ + + ++ L+ Y + VA+ + K + ++ + F G R R Y V
Sbjct: 427 IDMYIISKEKLSLSNYKLNTVAKECVGEKKEDVSYKEIPALF-KGSANDRARLGLYCVQD 485
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY-LAISPG 1254
+ L ++++ SE+A++ I V++ G Q RV S LL A ++ Y L +S
Sbjct: 486 SILVMDLLKYFMTHVEISEIAKIANIPMRRVITDGQQIRVFSCLLASAKSRGYILPVSQT 545
Query: 1255 NHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKE 1314
+ Q A V+ P SGFY PV+V+DF SLYPS++ A+NLC+ T +
Sbjct: 546 ANFEGYQGAT-----VINPLSGFYNTPVLVVDFASLYPSIIQAHNLCYSTLIH------- 593
Query: 1315 NTLGVSSFRPDLHVLRDLKD---ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQ 1371
DLH LK+ E + +G ++ V+K + LL +L+T + ++
Sbjct: 594 --------HEDLHKHPQLKESDYETFVISSGPVHF---VKKHISESLLSNLLTTWLAKRK 642
Query: 1372 AIKK--LAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1429
I+K A + L I + +QLA+K+ N YG+T SG +PC ++A+++ GR+
Sbjct: 643 TIRKELAACNDPKLKTILDKQQLAIKVTCNAVYGFTGVA-SGMLPCLKIAETVTTQGRAM 701
Query: 1430 LEKAISFVN--------------------ENEKWKAKVIYGDTD 1453
LEK FV ++ KV+YGDTD
Sbjct: 702 LEKTKIFVENLNHTMLQAICYPLDIPLLPKDVTMPFKVVYGDTD 745
>gi|319919380|gb|ADV78258.1| DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 198/466 (42%), Gaps = 68/466 (14%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I D ++ E L F+ + P+I+ G++I L +L RA L
Sbjct: 325 IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKL--------- 375
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
++ G+ ++G+ L K + + ++ G I
Sbjct: 376 -----YRLGVGEFTKLKKGL-------------LCIKSTNDFKQGFNCIKTKVYASGMIC 417
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ + + G++ + Y ++ +A L + +P++ + F SG G R + Y +
Sbjct: 418 IDFYPVCVGKITSDNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSG-GRCKVGRYCIQD 476
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
+ + E+ + + S ++++ + V++ G Q RV + +L +N L
Sbjct: 477 SVIVKELFCKFNYHMEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPDKIA 536
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ + V++P G+YA PV+V+DF SLYPS+MIA NLC+ T ++ + E+
Sbjct: 537 PRETGEDESYKGATVLDPHVGYYASPVIVMDFASLYPSIMIANNLCYST----LILNDED 592
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPN---GVMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
G+ D KD L + N +V VR+ +L LL L R VK
Sbjct: 593 VTGI-----------DEKDILTVHVNKNTAYRFVRSSVRESILGTLLSRWLRKRKEVKAR 641
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K+ +L I + +QLALK+ N YG+T A G +PC LA SI GR L +
Sbjct: 642 MKRC--EDPMLALILDKQQLALKVTCNAFYGFTGA-VRGLLPCLPLAASITSIGRDMLRQ 698
Query: 1433 AISFVNE--------NEK-----------WKAKVIYGDTDRYTVCI 1459
F+N +EK + VIYGDTD VC+
Sbjct: 699 TSDFINNVLSSREYVSEKFSLSDGDFQGDFSLNVIYGDTDSVFVCV 744
>gi|344254015|gb|EGW10119.1| DNA polymerase zeta catalytic subunit [Cricetulus griseus]
Length = 2601
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 135/287 (47%), Gaps = 47/287 (16%)
Query: 923 QDISQISGPD-GRSKPTPLSQIGFQDPASAGAGEQLTLLSIEVQAESRGDLRPDPRYDSI 981
++ SQI GP + +S Q+ + + LTL+S+E+ A +R DL+PDP +D I
Sbjct: 1952 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQPDPEFDPI 2011
Query: 982 NVVALAFENDS-------DHAVEIYVLLYCKSESHQ----------RSLVGIPDCKVFVC 1024
+ +D+ + V+ K+ +HQ RS GI ++
Sbjct: 2012 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTHQDIRYQTPLLIRS--GITGLEITYA 2069
Query: 1025 SKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIA 1084
+ E LF I+ +DPDIL+G++IQ S G+L +RAA L + L ISR P
Sbjct: 2070 ADEKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP------ 2123
Query: 1085 AGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRG 1144
D +I R AE D++G S +++ GRI LN+WR+MR
Sbjct: 2124 --DDKIENR----------FAAE---------RDDYGSDTMSEINIVGRITLNLWRIMRN 2162
Query: 1145 EVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEY 1191
EV L YT E V+ VL ++ P FRVL+ WF + RY ++
Sbjct: 2163 EVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRYEEFKF 2209
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
Query: 116 CSLVRAKKGGAVFDKSLQPHESHIPFLLQFLVDYNLYGMGHLHLSKLKFR 165
C L+++ GA+ +K QPHE+HIP+LLQ +DYNLYGM ++L+ +KFR
Sbjct: 6 CELLQS---GAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 52
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 1417 ELADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTDRYTVCI 1459
++ DSIV R TLE+AI VN+ +KW A+V+YGDTD V +
Sbjct: 2239 KVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSMFVLL 2281
>gi|56694753|ref|YP_164473.1| DNA polymerase catalytic subunit [Cercopithecine herpesvirus 2]
gi|52843305|gb|AAU88096.1| DNA polymerase catalytic subunit [Cercopithecine herpesvirus 2]
Length = 1226
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 213/509 (41%), Gaps = 129/509 (25%)
Query: 1015 GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDI 1074
G+P V E + F+ + + P+ G++I FL I L D+
Sbjct: 430 GLPAPTVLEFDSEFEMLLAFVTFVKQYGPEFATGYNIINFDWPFL--------IAKLTDV 481
Query: 1075 SRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH---ASGLHVG 1131
+ PL+ G ++ RG+ + G++H S + +
Sbjct: 482 YKVPLD-----GYGRMNRRGVFRVW-------------------DIGQSHFQKRSKIKMN 517
Query: 1132 GRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP---GRARYRC 1188
G + ++++ ++ +VKL+ Y + AVAE VL+ K + +R + +++A+GP G C
Sbjct: 518 GVVNIDMYGIVCDKVKLSSYKLNAVAEAVLKDKKKDLSYRDIPRYYAAGPAQRGVIGEYC 577
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
V+ + +L + + L++ S +AR+ GI + G Q RV + LLRLA + +
Sbjct: 578 VQDSLLVGQLFFKFLPHLEL----SAVARLAGITLTRTIYDGQQIRVYTCLLRLAGQKGF 633
Query: 1249 L----------------AISP--------------------------GNHQVASQPAMEC 1266
L P G V Q A
Sbjct: 634 LLPDNRGRFRAAAGDDGGGGPEDATAGGGGEDGDDADGAAALAREGSGGRHVGYQGAK-- 691
Query: 1267 LPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDL 1326
V++P SGF+ DPVVV DF SLYPS++ A+NLCF T +LG + +
Sbjct: 692 ---VLDPTSGFHVDPVVVFDFASLYPSIIQAHNLCFSTL----------SLGADA----V 734
Query: 1327 HVLRDLKDELLIPPNG--VMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILH 1384
L +D L I G + +V VR+ +L LL + L+ R ++ I + P + +L
Sbjct: 735 AGLEPGRDYLDIEVGGRRLFFVKAHVRESLLSILLRDWLAMRKEIRSRIPQSTPEEAVL- 793
Query: 1385 RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN---- 1440
+ +Q A+K++ N YG+T G +PC +A ++ GR L +V+
Sbjct: 794 --LDKQQAAIKVVCNSVYGFTGVQ-HGLLPCLHVAATVTTIGRDMLLATREYVHARWATF 850
Query: 1441 EKWKA----------------KVIYGDTD 1453
E+ +A ++IYGDTD
Sbjct: 851 ERLRADFPEAAAMRAPGPYSMRIIYGDTD 879
>gi|305387316|gb|ADM52173.1| DNA polymerase [Human herpesvirus 2]
Length = 1238
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 130/537 (24%), Positives = 220/537 (40%), Gaps = 146/537 (27%)
Query: 1007 ESHQRSLV--GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
ESH L G+P V E + F+ + + P+ + G++I F+ +
Sbjct: 422 ESHLSDLASRGLPAPVVLEFDSEFEMLLAFMTFVKQYGPEFVTGYNIINFDWPFVLTK-- 479
Query: 1065 HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
L +I + PL+ G ++ RG+ + G++H
Sbjct: 480 ------LTEIYKVPLD-----GYGRMNGRGVFRVW-------------------DIGQSH 509
Query: 1125 ---ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
S + V G + ++++ ++ +VKL+ Y + AVAE VL+ K + +R + ++ASGP
Sbjct: 510 FQKRSKIKVNGMVNIDMYGIITDKVKLSSYKLNAVAEAVLKDKKKDLSYRDIPAYYASGP 569
Query: 1182 ---GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
G CV+ + +L + + L++ S +AR+ GI+ + G Q RV +
Sbjct: 570 AQRGVIGEYCVQDSLLVGQLFFKFLPHLEL----SAVARLAGINITRTIYDGQQIRVFTC 625
Query: 1239 LLRLAHTQNYL------------------------------------------------- 1249
LLRLA + ++
Sbjct: 626 LLRLAGQKGFILPDTQGRFRGLDKEAPKRPAVPRGEGERPGDGNGDEDKDGDGDEDGDER 685
Query: 1250 ---AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
A G V Q A V++P SGF+ DPVVV DF SLYPS++ A+NLCF T
Sbjct: 686 EEVARETGGRHVGYQGAR-----VLDPTSGFHVDPVVVFDFASLYPSIIQAHNLCFSTL- 739
Query: 1307 GKILPSKENTLGVSSFRPD--LHVLRDLKDELLIPPNG--VMYVPPKVRKGVLPRLLEEI 1362
S RP+ H+ D +D L I G + +V VR+ +L LL +
Sbjct: 740 --------------SLRPEAVAHLEAD-RDYLEIEVGGRRLFFVKAHVRESLLSILLRDW 784
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L+ R ++ I + P + +L + +Q A+K++ N YG+T G +PC +A ++
Sbjct: 785 LAMRKQIRSRIPQSTPEEAVL---LDKQQAAIKVVCNSVYGFTGVQ-HGLLPCLHVAATV 840
Query: 1423 VQCGRSTLEKAISFVNENEK--------------------WKAKVIYGDTDR-YTVC 1458
GR L ++V+ + ++IYGDTD + +C
Sbjct: 841 TTIGREMLLATRAYVHARWAEFDQLLADFPEAAGMRAPGPYSMRIIYGDTDSIFVLC 897
>gi|313208729|emb|CBH41140.1| DNA polymerase delta [Taenia ovis]
Length = 278
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 16/191 (8%)
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVL 1329
V+EP+ GFY +P+ LDF SLYPS+M+A+NLC+ T L K + S L
Sbjct: 32 VIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL------KPEDISASGGISGLLAN 85
Query: 1330 RDLK-DELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFN 1388
+L D+ + P G +V +RKG+LP +LE++L R K+ + +A + R+ +
Sbjct: 86 YNLGPDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM--VAETDHFRRRVLD 143
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISF------VNENEK 1442
RQLALK+ AN YG+T A G++PC E++ SI GR +E+ + K
Sbjct: 144 GRQLALKVSANSVYGFTGAQV-GKLPCLEISSSISGFGREMIEETKRLLEGRFTIGNGYK 202
Query: 1443 WKAKVIYGDTD 1453
AKVIYGDTD
Sbjct: 203 GDAKVIYGDTD 213
>gi|153803852|gb|AAW55994.2| DNA polymerase [Myodes glareolus rhadinovirus 1]
Length = 749
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 222/488 (45%), Gaps = 72/488 (14%)
Query: 990 NDSDHAVEIYVLLY-CKSESHQRSLVG------IPDCKVFVCSKEIHLFSHFIKILCSFD 1042
N++D ++I +++ ES +R L+ IPDC ++ E L F+ ++ D
Sbjct: 308 NENDPIIQISCVVWKFNQESPRRILLSLGTTSEIPDCSIYEFPSEYDLILGFLTLMRDAD 367
Query: 1043 PDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAE 1102
+ + G++I L ++ +RA + +I L +K+ G E+ E TD
Sbjct: 368 IEFITGYNIANFDLPYIIDRATKV-----YNID-CSLYTKLVKGTFEVKEP--TDCGAG- 418
Query: 1103 PVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLR 1162
+ R H S + + G + ++++ + + ++ L+ Y + VA L
Sbjct: 419 -----------------FMRAH-SKIRITGIVPIDMYPVCKDKLSLSDYKLNTVATACLG 460
Query: 1163 RKIPSIPFRVLTKWFASGP-GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
+ + ++ + F SG GRA+ +Y + A L LE++ + +E+A++ I
Sbjct: 461 AQKDDVSYKEIPILFRSGKIGRAKIG--KYCLMDAMLVLELLKHFMVHIEIAEIAKLAKI 518
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADP 1281
+L+ G Q RV S LL A T Y+ + H + +Q V+ P GFY P
Sbjct: 519 PVRRILTDGQQIRVFSCLLEAAKTAGYI-LPCKQHTMEAQGYQGAT--VISPIPGFYNSP 575
Query: 1282 VVVLDFQSLYPSMMIAYNLCFCTCL-GKILPSKENTLGVSSFRPDLHVLRDLKDELLIPP 1340
++V+DF SLYPS++ A+NLC+ T + ILP N P+ + D +
Sbjct: 576 ILVVDFASLYPSIIQAHNLCYSTYIPSNILPLYSN------LTPEDY------DTFHLSS 623
Query: 1341 NGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANV 1400
V +V P ++ +L LL + L+ R +K + +Q I + +Q A+K+ N
Sbjct: 624 GTVHFVKPHKKESLLSILLTKWLNKRKSLKNRLATCTDPKQ--KTILDKQQNAIKVTCNS 681
Query: 1401 TYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNEN---------------EKWKA 1445
YG+T SG +PC +A++I GR L+ + +++ EN
Sbjct: 682 VYGFTGVS-SGMLPCLAIAETITFQGRKMLDISKNYI-ENLTPESIARLPGGCFVSDGSL 739
Query: 1446 KVIYGDTD 1453
+VIYGDTD
Sbjct: 740 RVIYGDTD 747
>gi|323482729|gb|AAM89278.2| DNA polymerase [Gorilla gorilla lymphocryptovirus 2]
Length = 749
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 212/462 (45%), Gaps = 63/462 (13%)
Query: 990 NDSDHAVEIYVLLYCKSES---HQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCS 1040
ND+D ++I +L+ ++ ++R L+ + C +V+ E+ + F +++
Sbjct: 309 NDADLILQISCVLWSTGDTVGRYRRILLTLGTCDEIEGVEVYEFPSELDMLYAFFQLIRD 368
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+I+ G+++ ++ +RA H I LN S KI G
Sbjct: 369 LSVEIVTGYNVANFDWPYILDRARH--IYGLNPASL----GKIRMGG------------- 409
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
V E DA + + + V G + ++++ + R ++ L+ Y ++ VA +
Sbjct: 410 ----VCEVRRPHDA---GKGFLRATTKVRVTGVVPIDMYAVCRDKLSLSDYKLDTVARHL 462
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L + + ++ + FA GP R R Y V + L ++++N + +E+A++
Sbjct: 463 LGARKEDVHYKEIPWLFAKGPD-GRRRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAH 521
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPG-----NHQVASQPAMECLPLVMEPES 1275
I VL G Q RV S LL A ++++ P +Q A+ V++P S
Sbjct: 522 IPCRRVLDDGQQIRVFSCLLAAAQKEDFILPMPAAADRDGYQGAT---------VIQPLS 572
Query: 1276 GFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDE 1335
GFY PV+V+DF SLYPS++ A+NLC+ T I P +E+ L + RP + +
Sbjct: 573 GFYNSPVLVVDFASLYPSIIQAHNLCYST---MITPGEEHRL--AGLRPGVDY-----ES 622
Query: 1336 LLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALK 1395
+ +V V + L LL L+ R +K+ + +Q I + +QLA+K
Sbjct: 623 FRLTGGTYHFVKKHVHESFLASLLTSWLAKRKAIKRLLAACEDPRQ--KTILDKQQLAVK 680
Query: 1396 LIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
N YG+T +G PC +A+++ GR+ LE+A +FV
Sbjct: 681 CTCNAVYGFTGVA-NGLFPCLSIAETVTLQGRTMLERAKAFV 721
>gi|305387229|gb|ADM52137.1| DNA polymerase [Human herpesvirus 2]
Length = 1238
Score = 126 bits (317), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 130/537 (24%), Positives = 219/537 (40%), Gaps = 146/537 (27%)
Query: 1007 ESHQRSLV--GIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAA 1064
ESH L G+P V E + F+ + + P+ + G++I F+ +
Sbjct: 422 ESHLSDLASRGLPAPVVLEFDSEFEMLLAFMTFVKQYGPEFVTGYNIINFDWPFVLTK-- 479
Query: 1065 HLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTH 1124
L +I + PL+ G ++ RG+ + G +H
Sbjct: 480 ------LTEIYKVPLD-----GYGRMNGRGVFRVW-------------------DIGHSH 509
Query: 1125 ---ASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGP 1181
S + V G + ++++ ++ +VKL+ Y + AVAE VL+ K + +R + ++ASGP
Sbjct: 510 FQKRSKIKVNGMVNIDMYGIITDKVKLSSYKLNAVAEAVLKDKKKDLSYRDIPAYYASGP 569
Query: 1182 ---GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 1238
G CV+ + +L + + L++ S +AR+ GI+ + G Q RV +
Sbjct: 570 AQRGVIGEYCVQDSLLVGQLFFKFLPHLEL----SAVARLAGINITRTIYDGQQIRVFTC 625
Query: 1239 LLRLAHTQNYL------------------------------------------------- 1249
LLRLA + ++
Sbjct: 626 LLRLAGQKGFILPDTQGRFRGLDKEAPKRPAVPRGEGERPGDGNGDEDKDEDGDEDGDER 685
Query: 1250 ---AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCL 1306
A G V Q A V++P SGF+ DPVVV DF SLYPS++ A+NLCF T
Sbjct: 686 EEVARETGGRHVGYQGAR-----VLDPTSGFHVDPVVVFDFASLYPSIIQAHNLCFSTL- 739
Query: 1307 GKILPSKENTLGVSSFRPD--LHVLRDLKDELLIPPNG--VMYVPPKVRKGVLPRLLEEI 1362
S RP+ H+ D +D L I G + +V VR+ +L LL +
Sbjct: 740 --------------SLRPEAVAHLEAD-RDYLEIEVGGRRLFFVKAHVRESLLSILLRDW 784
Query: 1363 LSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSI 1422
L+ R ++ I + P + +L + +Q A+K++ N YG+T G +PC +A ++
Sbjct: 785 LAMRKQIRSRIPQSTPEEAVL---LDKQQAAIKVVCNSVYGFTGVQ-HGLLPCLHVAATV 840
Query: 1423 VQCGRSTLEKAISFVNENEK--------------------WKAKVIYGDTDR-YTVC 1458
GR L ++V+ + ++IYGDTD + +C
Sbjct: 841 TTIGREMLLATRAYVHARWAEFDQLLADFPEAAGMRAPGPYSMRIIYGDTDSIFVLC 897
>gi|337732497|gb|AEI71770.1| DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 198/466 (42%), Gaps = 68/466 (14%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I D ++ E L F+ + P+I+ G++I L +L RA L
Sbjct: 325 IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKL--------- 375
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
++ G+ ++G+ L K + + ++ G I
Sbjct: 376 -----YRLGVGEFTKLKKGL-------------LCIKSTNDFKQGFNCIKTKVYASGMIC 417
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ + + G++ + Y ++ +A L + +P++ + F SG G R + Y +
Sbjct: 418 IDFYPVCVGKITSDNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSG-GRCKVGRYCIQD 476
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
+ + E+ + + S ++++ + V++ G Q RV + +L +N L
Sbjct: 477 SVIVKELFCKFNYHMEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPDKIA 536
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ + V++P G+YA PV+V+DF SLYPS+MIA NLC+ T ++ + E+
Sbjct: 537 PRETGEDESYKGATVLDPHVGYYASPVIVMDFASLYPSIMIANNLCYST----LILNDED 592
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNG---VMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
G+ D KD L + N +V VR+ +L LL L R VK
Sbjct: 593 VTGI-----------DEKDILTVHVNKNTVYRFVRSSVRESILGTLLSRWLRKRKEVKAR 641
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K+ +L I + +QLALK+ N YG+T A G +PC LA SI GR L +
Sbjct: 642 MKRC--EDPMLALILDKQQLALKVTCNAFYGFTGA-VRGLLPCLPLAASITSIGRDMLRQ 698
Query: 1433 AISFVNE--------NEK-----------WKAKVIYGDTDRYTVCI 1459
F+N +EK + VIYGDTD VC+
Sbjct: 699 TSDFINNVLSSREYVSEKFSLSDGDFQGDFSLNVIYGDTDSVFVCV 744
>gi|8810232|gb|AAF80107.1|AF268039_1 DNA polymerase [porcine cytomegalovirus]
Length = 1007
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 198/466 (42%), Gaps = 68/466 (14%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I D ++ E L F+ + P+I+ G++I L +L RA L
Sbjct: 325 IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKL--------- 375
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
++ G+ ++G+ L K + + ++ G I
Sbjct: 376 -----YRLGVGEFTKLKKGL-------------LCIKSTNDFKQGFNCIKTKVYASGMIC 417
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ + + G++ + Y ++ +A L + +P++ + F SG G R + Y +
Sbjct: 418 IDFYPVCVGKITSDNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSG-GRCKVGRYCIQD 476
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
+ + E+ + + S ++++ + V++ G Q RV + +L +N L
Sbjct: 477 SMIVKELFCKFNYHMEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPDKIA 536
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ + V++P G+YA PV+V+DF SLYPS+MIA NLC+ T ++ + E+
Sbjct: 537 PRETGEDESYRGATVLDPHVGYYASPVIVMDFASLYPSIMIANNLCYST----LILNDED 592
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNG---VMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
G+ D KD L + N +V VR+ +L LL L R VK
Sbjct: 593 VTGI-----------DEKDILTVHVNKNTVYRFVRSSVRESILGTLLSRWLRKRKEVKAR 641
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K+ +L I + +QLALK+ N YG+T A G +PC LA SI GR L +
Sbjct: 642 MKRC--EDPMLALILDKQQLALKVTCNAFYGFTGA-VHGLLPCLPLAASITSIGRDMLRQ 698
Query: 1433 AISFVNE--------NEK-----------WKAKVIYGDTDRYTVCI 1459
F+N +EK + VIYGDTD VC+
Sbjct: 699 TSDFINNVLSSREYVSEKFSLSDGDFQGDFSLNVIYGDTDSVFVCV 744
>gi|24059779|dbj|BAC21632.1| hypothetical protein [Macaca fascicularis]
Length = 389
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Query: 1358 LLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
+LEEIL TR MVKQ++K + L R+ +ARQL LKLIANVT+GYTAA FSGRMPC E
Sbjct: 1 MLEEILKTRFMVKQSMKAYK-QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIE 59
Query: 1418 LADSIVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
+ DSIV R TLE+AI VN+ +KW A+V+YGDTD
Sbjct: 60 VGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTD 95
>gi|324962845|gb|AAM89279.2| DNA polymerase [Pongo pygmaeus cytomegalovirus 1]
Length = 747
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 156/320 (48%), Gaps = 33/320 (10%)
Query: 1128 LHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR-VLTKWFASGPGRARY 1186
+HV G +V++++ + + Y + +AE L++ + ++ + K+ AS GRA+
Sbjct: 429 VHVSGSVVIDMYPVCMAKTNSPNYKLNTMAELYLKQHKEDMSYKDIPVKFMASAEGRAQV 488
Query: 1187 RCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQ 1246
+Y + A L ++ N ++ +AR+ I V+ G Q R+ + LL +
Sbjct: 489 G--KYCIQDAVLVRDLFNTINFHYEAGAIARLAKISMRRVIFDGQQIRIYTSLLDECACR 546
Query: 1247 NYLAISPGNHQVASQPAMECL-PLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTC 1305
++ + P VA+ + V EPE G+Y DPVVV DF SLYPS+++A+NLC+ T
Sbjct: 547 DF--VLPNYKSVAASSEVSYQGATVFEPEIGYYHDPVVVFDFASLYPSIIMAHNLCYSTL 604
Query: 1306 L--GKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVM--YVPPKVRKGVLPRLLEE 1361
+ G P +E V+ NGV +V VR VL LL
Sbjct: 605 ILPGGECPPEEQVYTVTF------------------ENGVTHRFVKTDVRISVLSELLNR 646
Query: 1362 ILSTRIMVKQAIKKL-APSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELAD 1420
L R V++ +K+ P +++L + QLALK+ N YG+T +G MPC +A
Sbjct: 647 WLCQRRAVRECMKECDDPVRRML---LDKEQLALKVTCNAFYGFTGV-VNGMMPCLPIAS 702
Query: 1421 SIVQCGRSTLEKAISFVNEN 1440
SI + GR LE+ F+ +N
Sbjct: 703 SITRIGRDMLERTSRFITDN 722
>gi|8810234|gb|AAF80108.1|AF268040_1 DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 198/466 (42%), Gaps = 68/466 (14%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I D ++ E L F+ + P+I+ G++I L +L RA L
Sbjct: 325 IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKL--------- 375
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
++ G+ ++G+ L K + + ++ G I
Sbjct: 376 -----YRLGVGEFTKLKKGL-------------LCIKSTNDFKQGFNCIKTKVYASGMIC 417
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ + + G++ + Y ++ +A L + +P++ + F SG G R + Y +
Sbjct: 418 IDFYPVCVGKITSDNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSG-GRCKVGRYCIQD 476
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
+ + E+ + + S ++++ + V++ G Q RV + +L +N L
Sbjct: 477 SVIVKELFCKFNYHMEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPDKIA 536
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ + V++P G+YA PV+V+DF SLYPS+MIA NLC+ T ++ + E+
Sbjct: 537 PRETGEDESYRGATVLDPHVGYYASPVIVMDFASLYPSIMIANNLCYST----LILNDED 592
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNG---VMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
G+ D KD L + N +V VR+ +L LL L R VK
Sbjct: 593 VTGI-----------DEKDILTVHVNKNTVYRFVRSGVRESILGTLLSRWLRKRKEVKAR 641
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K+ +L I + +QLALK+ N YG+T A G +PC LA SI GR L +
Sbjct: 642 MKRC--EDPMLALILDKQQLALKVTCNAFYGFTGA-VHGLLPCLPLAASITSIGRDMLRQ 698
Query: 1433 AISFVNE--------NEK-----------WKAKVIYGDTDRYTVCI 1459
F+N +EK + VIYGDTD VC+
Sbjct: 699 TSDFINNVLSSREYVSEKFGLSDGDFQGDFSLNVIYGDTDSVFVCV 744
>gi|343963283|gb|AEM72568.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 783
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 196/469 (41%), Gaps = 84/469 (17%)
Query: 1012 SLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI--G 1069
S IP ++ C+ E L F+ + + P+ + G++I + ++ R + I G
Sbjct: 372 SCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
+ R + +G+ ES L + +
Sbjct: 432 AFTKMKRGRMTCF----------KGM-----------ESFLNR-----------CQCKVT 459
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA-SGPGRARYRC 1188
+ G ++++++R+ +V + ++ V + +L K S+P++ + F GRA
Sbjct: 460 ISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQIPVLFRRDDDGRAVVG- 518
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
Y V + L ++ +L S +AR+ I V+ G Q R+ + +L A +
Sbjct: 519 -AYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQSRIFTCMLAAARREG- 576
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
I P + V+EP++GFY PV V DF SLYPS++ AYNLC+CT +
Sbjct: 577 -LIIPSIDEAGEDTYQG--ATVLEPKTGFYNTPVAVFDFASLYPSIIQAYNLCYCTLITD 633
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVM--YVPPKVRKGVLPRLLEEILSTR 1366
D+ LR+ ++ G + +V P VRK +L +LL L+ R
Sbjct: 634 ---------------NDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLLTSWLAER 678
Query: 1367 IMVKQAIKKLA-PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
V++ +K P QIL + +QLALKL N YG+T G PC +A+S+
Sbjct: 679 KAVREKLKHCKDPLMQIL---LDKQQLALKLTCNAVYGFTGVS-KGMFPCLAIAESVTAQ 734
Query: 1426 GRSTLEKAISFVN---------------------ENEKWKAKVIYGDTD 1453
GR L ++ ++ ++K V+YGDTD
Sbjct: 735 GRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTD 783
>gi|8810239|gb|AAF80111.1|AF268042_2 DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 198/466 (42%), Gaps = 68/466 (14%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I D ++ E L F+ + P+I+ G++I L +L RA L
Sbjct: 325 IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKL--------- 375
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
++ G+ ++G+ L K + + ++ G I
Sbjct: 376 -----YRLGVGEFTKLKKGL-------------LCIKSTNDFKQGFNCIKTKVYASGMIC 417
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ + + G++ + Y ++ +A L + +P++ + F SG G R + Y +
Sbjct: 418 IDFYPVCVGKITSDNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSG-GRCKVGRYCIQD 476
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
+ + E+ + + S ++++ + V++ G Q RV + +L +N L
Sbjct: 477 SVIVKELFCKFNYHMEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPDKIA 536
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ + V++P G+YA PV+V+DF SLYPS+MIA NLC+ T ++ + E+
Sbjct: 537 PRETGEDESYRGATVLDPHVGYYASPVIVMDFASLYPSIMIANNLCYST----LILNDED 592
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNG---VMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
G+ D KD L + N +V VR+ +L LL L R VK
Sbjct: 593 VTGI-----------DEKDILTVHVNKNTVYRFVRSGVRESILGTLLSRWLRKRKEVKAR 641
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K+ +L I + +QLALK+ N YG+T A G +PC LA SI GR L +
Sbjct: 642 MKRC--EDPMLALILDKQQLALKVTCNAFYGFTGA-VHGLLPCLPLAASITSIGRDMLRQ 698
Query: 1433 AISFVNE--------NEK-----------WKAKVIYGDTDRYTVCI 1459
F+N +EK + VIYGDTD VC+
Sbjct: 699 TSDFINNVLSSREYVSEKFGLSDGDFQGDFSLNVIYGDTDSVFVCV 744
>gi|426244098|ref|XP_004015869.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit [Ovis aries]
Length = 1198
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 109/191 (57%), Gaps = 26/191 (13%)
Query: 1270 VMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVL 1329
V+EP G+Y P+ LDF SLYPS+M+A+NLC+ T L P ++ LG++
Sbjct: 466 VIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL---RPGADHKLGLT--------- 513
Query: 1330 RDLKDELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHR-IFN 1388
+D+ + P G +V VRKG+LP++LE +LS R K+A +LA L R + +
Sbjct: 514 ---EDQFIKTPTGDEFVKTSVRKGLLPQILENLLSAR---KRAKAELAKETDPLRRQVLD 567
Query: 1389 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN-----ENE-K 1442
RQLALK+ AN YG+T A GR+PC E++ S+ GR +EK V EN
Sbjct: 568 GRQLALKVSANSVYGFTGAQV-GRLPCLEISQSVTGFGRQMIEKTKQLVETKYTVENGYS 626
Query: 1443 WKAKVIYGDTD 1453
AKV+YGDTD
Sbjct: 627 TSAKVVYGDTD 637
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 75/195 (38%), Gaps = 42/195 (21%)
Query: 3 DSQPDSNIFSVRIVSIDHYMAP--PIPGYDICYSSLQGGKVNEVPVIRVYGSTPAGQKTC 60
D Q + IF + + IDHY+ P P+PG QG VP++R +G T G C
Sbjct: 97 DPQTEPLIF--QQLEIDHYVGPARPLPGAP---PPSQG----SVPILRAFGVTDEGVSVC 147
Query: 61 LHIHRALPYLYVPCAD--IPVQLRQEDDGYMHAISLALEKALKVKGSAGSKRQ------- 111
HIH PY Y P P L + AIS ++ G A +
Sbjct: 148 CHIHGFAPYFYTPAPPGFGPEHLSELQRELSAAISRDQRGGKELTGPAVLAVELCSRESM 207
Query: 112 ---HVHECS-------------------LVRAKKGGAVFDKSLQPHESHIPFLLQFLVDY 149
H H S L + + + S P+E+++ F ++F+VD
Sbjct: 208 FGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRLAGLGTPSFAPYEANVDFEIRFMVDT 267
Query: 150 NLYGMGHLHLSKLKF 164
++ G L L K+
Sbjct: 268 DIVGCNWLELPAGKY 282
>gi|343963228|gb|AEM72532.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 196/468 (41%), Gaps = 82/468 (17%)
Query: 1012 SLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI--G 1069
S IP ++ C+ E L F+ + + P+ + G++I + ++ R + I G
Sbjct: 372 SCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
+ R + +G+ ES L + +
Sbjct: 432 AFTKMKRGRMTCF----------KGM-----------ESFLNR-----------CQCKVT 459
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA-SGPGRARYRC 1188
+ G ++++++R+ +V + ++ V + +L K S+P++ + F GRA
Sbjct: 460 ISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQIPVLFRRDDDGRAVVG- 518
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
Y V + L ++ +L S +AR+ I V+ G Q R+ + +L A +
Sbjct: 519 -AYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQSRIFTCMLAAARREG- 576
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
I P + V+EP++GFY PV V DF SLYPS++ AYNLC+CT +
Sbjct: 577 -LIIPSIDEAGEDTYQG--ATVLEPKTGFYNTPVAVFDFASLYPSIIQAYNLCYCTLITD 633
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVM--YVPPKVRKGVLPRLLEEILSTR 1366
D+ LR+ ++ G + +V P VRK +L +LL L+ R
Sbjct: 634 ---------------NDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLLTSWLAER 678
Query: 1367 IMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1426
V++ +K S ++ + + +QLALKL N YG+T G PC +A+S+ G
Sbjct: 679 KAVREKLKHCKDS--LMQILLDKQQLALKLTCNAVYGFTGVS-KGMFPCLAIAESVTAQG 735
Query: 1427 RSTLEKAISFVN---------------------ENEKWKAKVIYGDTD 1453
R L ++ ++ K+K V+YGDTD
Sbjct: 736 RQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNKFKIDVVYGDTD 783
>gi|402465764|gb|EJW01429.1| hypothetical protein EDEG_00023 [Edhazardia aedis USNM 41457]
Length = 671
Score = 125 bits (313), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 161/368 (43%), Gaps = 50/368 (13%)
Query: 949 ASAGAGEQL---TLLSIEVQAESRGDLRPDPRYDSINVVA--LAFENDSDHAVE-IYVLL 1002
A AG E+L +LS +++ D P + D + + A ND D+ + I+ L
Sbjct: 185 AHAGEFEKLPPLKILSFDIECIGPTDAFPTAKEDPVIQIGNTTAVSNDYDNVQKTIFTLG 244
Query: 1003 YCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER 1062
C IP V E L + + DPDI++G++I+ +L +R
Sbjct: 245 SC---------APIPGANVISFDDEKKLIESWRDYFVNEDPDIVIGYNIKNFDFPYLQDR 295
Query: 1063 AAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGR 1122
A L I + R+ KI D S R + G
Sbjct: 296 AHILQIENFASVGRSSRPMKIR--DQVFSSRQV-------------------------GN 328
Query: 1123 THASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPG 1182
+ + + GRI+ ++ ++R + L YT+ +V+ L+ + +P+ + + G
Sbjct: 329 RASKEIEIDGRIIFDMLSVIRRDFNLRSYTLNSVSVHFLKEQKEDVPYSSM-RSLQQGDQ 387
Query: 1183 RARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRL 1242
R R Y + L L + L+++ SE+ARV G+ + +RG +V S +LR
Sbjct: 388 ETRKRIATYCLRDTYLPLRLFKILNVLANYSEMARVTGVPIEYLSTRGQAIKVLSQILRK 447
Query: 1243 AHTQNYL--AISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNL 1300
A + Y+ ISP + + + VM PE GFYA P+ VLDF SLYPS+MI +NL
Sbjct: 448 AKEEGYVLPQISPSGDERSFEGG-----FVMAPEKGFYASPIAVLDFSSLYPSIMIVHNL 502
Query: 1301 CFCTCLGK 1308
C+ T L K
Sbjct: 503 CYTTLLTK 510
>gi|360040946|ref|YP_004940081.1| UL54 gene product [Aotine herpesvirus 1]
gi|359832123|gb|AEV80760.1| DNA polymerase catalytic subunit [Aotine herpesvirus 1]
Length = 1037
Score = 125 bits (313), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 174/359 (48%), Gaps = 45/359 (12%)
Query: 1123 THASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFR-VLTKWFASGP 1181
T + + + G +V++++ + + Y + +AE L+++ + ++ + K+ A+
Sbjct: 430 TTQTKVTISGAVVVDMYPVCMAKTSSPNYKLNTMAELYLQQRKDDLSYKEIPVKFLANEA 489
Query: 1182 GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLR 1241
GRA +Y V A L ++ N ++ +AR+ I V+ G Q R+ + LL
Sbjct: 490 GRAV--VGKYCVQDAVLVKDLFNIINFHYEAGAVARLAKISMRKVIFDGQQIRIYTSLLD 547
Query: 1242 LAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLC 1301
++ + + + A++ + V EPE+G+Y DPV+V DF SLYPS+++A+NLC
Sbjct: 548 ECACRDLVLPTYHRNGDAAEESSYQGATVFEPETGYYNDPVLVFDFASLYPSIIMAHNLC 607
Query: 1302 FCTCL--GKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMY--VPPKVRKGVLPR 1357
+ T + G P +E+ + SF NG +Y V +VR VL
Sbjct: 608 YSTLVMDGGECPEEEDKVYKVSFE-----------------NGTVYRFVKSEVRSSVLSE 650
Query: 1358 LLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAE 1417
LL ++ R V++ +++ + + + + QLALK+ N YG+T +G +PC
Sbjct: 651 LLTRWVAQRKAVRETMREC--TDPLKRTLLDKEQLALKVTCNAFYGFTGVA-NGMLPCLP 707
Query: 1418 LADSIVQCGRSTLEKAISFVNEN-------------EKW-----KAKVIYGDTDRYTVC 1458
+A SI + GR L+ F+++N E + +A+VIYGDTD VC
Sbjct: 708 VAASITRIGRGMLQDTARFIHDNFSTPDFLQTFFNAEDYVEGGVEARVIYGDTDSVFVC 766
>gi|257076927|ref|ZP_05571288.1| DNA polymerase II [Ferroplasma acidarmanus fer1]
Length = 777
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 216/512 (42%), Gaps = 105/512 (20%)
Query: 947 DPASAGAGEQLTLLSIEVQAESR-GDLRPDPRYDSINVVALAFENDSDHAVEIYVL---L 1002
+PA G T L I++ + D P + + + EN S EI+V+ +
Sbjct: 126 EPAEGEKGNYTTDLVIKINTVKKTDDFNP-----QLKIFSFDIEN-SISTREIFVIGYSV 179
Query: 1003 YCKSESHQRSLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAER 1062
+ E + +L G E + F K++ DPDI+ G++I G + L ER
Sbjct: 180 FFNGEITEGALTGT----------EPEMLEDFNKLVQREDPDIITGYNIDGYDMPLLEER 229
Query: 1063 AAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGR 1122
+ + + G IS R I D ++ R
Sbjct: 230 MKFNKV-------------RFSIGRDYISPRRIMD---------------------QYWR 255
Query: 1123 THASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSI-PFRVLTKWFASGP 1181
H GR++ + W +R + T+ V+ +L + + +W
Sbjct: 256 LH-------GRVIDDTWWEVRKVLHPKHETLNYVSNMLLNEGKEDVNRLDIENEW----- 303
Query: 1182 GRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLR 1241
R ++Y + A+L L I ++ +++R L+ V + V + G+ V+S+L+R
Sbjct: 304 KNRRDDVIKYCIKDARLALLIYRKIRILDRNLYLSTVSMLPLDDVTNGGTSTYVDSLLIR 363
Query: 1242 LAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLC 1301
A +N + + + + ++ M+P G Y D +VVLDF+S+YPSM+I YN+C
Sbjct: 364 RADREN-IGVPMSSSKFSNDTYAGGYVHTMDP--GLY-DMIVVLDFKSMYPSMIIKYNIC 419
Query: 1302 FCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLPRLLEE 1361
F T S E T ++ PNG ++ P V+KG++P LLE+
Sbjct: 420 FTTL------SPEGT--------------------IVAPNGARFLDPGVKKGIIPDLLEQ 453
Query: 1362 ILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADS 1421
++ R VK+ +K+ + H + Q A+K++ N YG F R E++ +
Sbjct: 454 LMKNRDEVKKQMKEDKSN----HDYLDGLQAAIKVLMNTFYGVLGTSFY-RFTNREISSA 508
Query: 1422 IVQCGRSTLEKAISFVNENEKWKAKVIYGDTD 1453
I R+T+ S + + +K KVIYGDTD
Sbjct: 509 ITAYARNTI---TSIIADLDKSGNKVIYGDTD 537
>gi|13447465|gb|AAG13396.2|AF283477_1 DNA polymerase [Caprine herpesvirus 2]
Length = 801
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 167/357 (46%), Gaps = 40/357 (11%)
Query: 1117 EDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKW 1176
E + R H S + + G +V++++ + R ++ L+ Y + VA+ L + + ++ +
Sbjct: 410 EGNFMRAH-SKVKLSGVVVIDMYHICRDKLSLSDYKLNTVAKECLGEEKTDVTYKDIPIL 468
Query: 1177 FASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVE 1236
F G R R R Y V A L L ++ +E+A++ I V+S G Q RV
Sbjct: 469 F-RGSSRDRARLGLYCVQDAVLVLNLLQHFMTHIEITEIAKIAHIPPRRVISDGQQIRVF 527
Query: 1237 SMLLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMI 1296
+ LL A + Y+ P A V+ P SGFY PV+V+DF SLYPS++
Sbjct: 528 ACLLAAAQERGYILPMPTTGATAGYQGAT----VINPLSGFYNTPVLVVDFASLYPSIIQ 583
Query: 1297 AYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVMYVPPKVRKGVLP 1356
A+NLC+ T ++P + +S F PDL D + I V +V + +L
Sbjct: 584 AHNLCYST----LVPHEM----LSDF-PDL--TPDDYETFSISSGPVHFVKRHKTESLLA 632
Query: 1357 RLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCA 1416
LL L+ R +++ + K + L I + +QLA+K+ N YG+T SG +PC
Sbjct: 633 SLLTAWLAKRKAIRRELAKCQDDK--LRTILDKQQLAIKVTCNSVYGFTGVA-SGMLPCL 689
Query: 1417 ELADSIVQCGRSTLEKAISFVN--------------------ENEKWKAKVIYGDTD 1453
+A+++ GR+ LEK FV +N + V+YGDTD
Sbjct: 690 TIAETVTLQGRTMLEKTKRFVETVDIQHLRELCQDPSITGLPQNPSPRLTVVYGDTD 746
>gi|8810236|gb|AAF80109.1|AF268041_1 DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 198/466 (42%), Gaps = 68/466 (14%)
Query: 1016 IPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDIS 1075
I D ++ E L F+ + P+I+ G++I L +L RA L
Sbjct: 325 IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKL--------- 375
Query: 1076 RTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIV 1135
++ G+ ++G+ L K + + ++ G I
Sbjct: 376 -----YRLGVGEFTKLKKGL-------------LCIKSTNDFKQGFNCIKTKVYASGMIC 417
Query: 1136 LNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGR 1195
++ + + G++ + Y ++ +A L + +P++ + F SG G R + Y +
Sbjct: 418 IDFYPVCVGKITSDNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSG-GRCKVGRYCIQD 476
Query: 1196 AKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1255
+ + E+ + + S ++++ + V++ G Q RV + +L +N L
Sbjct: 477 SVIVKELFCKFNYHMEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPDKIA 536
Query: 1256 HQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKEN 1315
+ + V++P G+YA PV+V+DF SLYPS+MIA NLC+ T ++ + E+
Sbjct: 537 PRETGEDESYRGATVLDPHVGYYASPVIVMDFASLYPSIMIANNLCYST----LILNDED 592
Query: 1316 TLGVSSFRPDLHVLRDLKDELLIPPNG---VMYVPPKVRKGVLPRLLEEILSTRIMVKQA 1372
G+ D KD L + N +V VR+ +L LL L R VK
Sbjct: 593 VTGI-----------DEKDILTVHVNKNTVYRFVRSGVRESMLGTLLSRWLRKRKEVKAR 641
Query: 1373 IKKLAPSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEK 1432
+K+ +L I + +QLALK+ N YG+T A G +PC LA SI GR L +
Sbjct: 642 MKRC--EDPMLALILDKQQLALKVTCNAFYGFTGA-VHGLLPCLPLAASITSIGRDMLRQ 698
Query: 1433 AISFVNE--------NEK-----------WKAKVIYGDTDRYTVCI 1459
F+N +EK + VIYGDTD VC+
Sbjct: 699 TSDFINNVLSSREYVSEKFGLSDGDFQGDFSLNVIYGDTDSVFVCV 744
>gi|323716896|gb|ADY05320.1| DNA polymerase [Saimiri sciureus lymphocryptovirus 2]
Length = 747
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 206/458 (44%), Gaps = 54/458 (11%)
Query: 990 NDSDHAVEIYVLLYC---KSESHQRSLVGIPDCK------VFVCSKEIHLFSHFIKILCS 1040
N++D ++I +L+ S ++R L+ + C+ V+ E+ + F +++
Sbjct: 308 NETDLILQISCVLWSVGDPSGQYRRILLTLGTCEEIEGVEVYEFPSELDMLYAFFQLIRD 367
Query: 1041 FDPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNML 1100
+I+ G+++ ++ +RA H+ G+ ++L
Sbjct: 368 LSVEIITGYNVANFDWPYILDRARHI--------------------------YGMNPSLL 401
Query: 1101 AEPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETV 1160
+ + + + + + G I ++++ + R ++ L+ Y ++ VA+ +
Sbjct: 402 GKIRTGGVCEVRRPTDSGKGFLRACTKVRISGVIPIDMYAVCREKLSLSDYKLDTVAQRL 461
Query: 1161 LRRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFG 1220
L + + ++ + F +GP R R Y V + L ++++N SE+A++
Sbjct: 462 LGARKEDVHYKEIPHLFRAGP-EGRKRLGMYCVQDSALVMDLLNHFVTHVEISEIAKIAN 520
Query: 1221 IDFFSVLSRGSQYRVESMLLRLAHTQNY-LAISPGNHQVASQPAMECLPLVMEPESGFYA 1279
I VL G Q RV S LL A + + L + +++ Q A V++P SGFY
Sbjct: 521 IPCRRVLDDGQQIRVFSCLLAAAQKEGFILPMLETSNRDGYQGAT-----VIQPVSGFYN 575
Query: 1280 DPVVVLDFQSLYPSMMIAYNLCFCTCLGKILPSKENTLGVSSFRPDLHVLRDLKDELLIP 1339
P++V+DF SLYPS++ A+NLC+ T + P + N L DL D + L
Sbjct: 576 CPILVVDFASLYPSIIQAHNLCYSTL---VTPGEGNRL------RDLRPGEDYQSFKLSD 626
Query: 1340 PNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLALKLIAN 1399
+V V K L LLE L+ R +++ + +Q I + +QLA+K N
Sbjct: 627 GGTYHFVKKHVHKSFLASLLESWLAKRKAIRKLLATCEDPRQ--RTILDKQQLAIKCTCN 684
Query: 1400 VTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
YG+T +G PC +A+++ GR+ LE+ +FV
Sbjct: 685 AVYGFTGVA-NGLFPCLTIAETVTLQGRTMLERTKAFV 721
>gi|343963252|gb|AEM72548.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 946
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 197/469 (42%), Gaps = 84/469 (17%)
Query: 1012 SLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI--G 1069
S IP ++ C+ E L F+ + + P+ + G++I + ++ R + I G
Sbjct: 372 SCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
+ R + +G+ ES L + +
Sbjct: 432 AFTKMKRGRMTCF----------KGM-----------ESFLNR-----------CQCKVT 459
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA-SGPGRARYRC 1188
+ G ++++++R+ +V + ++ V + +L K S+P++ + F GRA
Sbjct: 460 ISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQIPVLFRRDDDGRAVVG- 518
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
Y V + L ++ +L S +AR+ I V+ G Q R+ + +L A +
Sbjct: 519 -AYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQSRIFTCMLAAARRE-- 575
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
+ I P + V+EP++GFY PV V DF SLYPS++ AYNLC+CT +
Sbjct: 576 VLIIPSIDEAGEDTYQG--ATVLEPKTGFYNTPVAVFDFASLYPSIIQAYNLCYCTLITD 633
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVM--YVPPKVRKGVLPRLLEEILSTR 1366
D+ LR+ ++ G + +V P VRK +L +LL L+ R
Sbjct: 634 ---------------NDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLLTSWLAER 678
Query: 1367 IMVKQAIKKLA-PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
V++ +K P QIL + +QLALKL N YG+T G PC +A+S+
Sbjct: 679 KAVREKLKHCKDPLMQIL---LDKQQLALKLTCNAVYGFTGVS-KGMFPCLAIAESVTAQ 734
Query: 1426 GRSTLEKAISFVN---------------------ENEKWKAKVIYGDTD 1453
GR L ++ ++ ++K V+YGDTD
Sbjct: 735 GRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTD 783
>gi|156254727|gb|AAN35122.2| DNA polymerase [Macaca fascicularis rhadinovirus 1]
Length = 748
Score = 124 bits (312), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 204/463 (44%), Gaps = 67/463 (14%)
Query: 990 NDSDHAVEIYVLLYCKSES--HQRSLVGIPDC------KVFVCSKEIHLFSHFIKILCSF 1041
D D ++I + + E + R L+ + C ++F E + F ++ +
Sbjct: 312 RDGDVILQISCVFHAAGEDAPYTRILLSLGTCDPLDDTEIFEFPSEYDMLVSFFAMIRDY 371
Query: 1042 DPDILMGWDIQGGSLGFLAERAAHLGIGLLNDISRTPLESKIAAGDSEISERGITDNMLA 1101
D D + G++I L ++ RA + L+S + E +
Sbjct: 372 DVDFITGYNIANFDLPYIITRATQ--------VYNIDLKSFTKIKTGSVFE-------VH 416
Query: 1102 EPVVAESLLAKDAIIEDEWGRTHASGLHVGGRIVLNVWRLMRGEVKLNMYTVEAVAETVL 1161
EP + S + + G + ++++++ R ++ L+ Y ++ VA+ L
Sbjct: 417 EPAGGSGGFMRSQ-----------SKVKISGIVPIDMYQVCREKLSLSDYKLDTVAKQCL 465
Query: 1162 RRKIPSIPFRVLTKWFASGPGRARYRCVEYVVGRAKLNLEIMNQLDMINRTSELARVFGI 1221
++ I +R + F SG R + Y V + L ++++ +E+AR+ I
Sbjct: 466 GKQKDDISYRDIPPLFRSGAA-GRAKIGRYCVIDSVLVMDLLRMFQTHVEIAEIARLAKI 524
Query: 1222 DFFSVLSRGSQYRVESMLLRLAHTQNYLAISP-----GNHQVASQPAMECLPLVMEPESG 1276
VL+ G Q RV S LL A + Y+ P G +Q A+ V+ P G
Sbjct: 525 PARRVLTDGQQIRVFSCLLEAASQEGYILPVPNGDTTGGYQGAT---------VINPIPG 575
Query: 1277 FYADPVVVLDFQSLYPSMMIAYNLCFCTCL--GKILPSKENTLGVSSFRPDLHVLRDLKD 1334
FY DPV+V+DF SLYPS+M A+NLC+ T + IL E T P+ + +
Sbjct: 576 FYDDPVLVVDFASLYPSIMQAHNLCYSTLIQGNAILSHPELT-------PNDY------E 622
Query: 1335 ELLIPPNGVMYVPPKVRKGVLPRLLEEILSTRIMVKQAIKKLAPSQQILHRIFNARQLAL 1394
+ V +V VR+ +L +LL L+ R +++ + + I + +QLA+
Sbjct: 623 TFHLSGGPVHFVKRHVRESLLSKLLTTWLTKRKEIRRNLASCG--DPTMRTILDKQQLAI 680
Query: 1395 KLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFV 1437
K+ N YG+T SG +PC ++A+++ GR LE + +FV
Sbjct: 681 KVTCNAVYGFTGVA-SGILPCLKIAETVTLQGRRMLEASQAFV 722
>gi|343963237|gb|AEM72538.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 196/469 (41%), Gaps = 84/469 (17%)
Query: 1012 SLVGIPDCKVFVCSKEIHLFSHFIKILCSFDPDILMGWDIQGGSLGFLAERAAHLGI--G 1069
S IP ++ C+ E L F+ + + P+ + G++I + ++ R + I G
Sbjct: 372 SCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 1070 LLNDISRTPLESKIAAGDSEISERGITDNMLAEPVVAESLLAKDAIIEDEWGRTHASGLH 1129
+ R + +G+ ES L + +
Sbjct: 432 AFTKMKRGRMTCF----------KGM-----------ESFLNR-----------CQCKVT 459
Query: 1130 VGGRIVLNVWRLMRGEVKLNMYTVEAVAETVLRRKIPSIPFRVLTKWFA-SGPGRARYRC 1188
+ G ++++++R+ +V + ++ V + +L K S+P++ + F GRA
Sbjct: 460 ISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQIPVLFRRDDDGRAVVG- 518
Query: 1189 VEYVVGRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNY 1248
Y V + L ++ +L S +AR+ I V+ G Q R+ + +L A +
Sbjct: 519 -AYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQSRIFTCMLAAARREG- 576
Query: 1249 LAISPGNHQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMMIAYNLCFCTCLGK 1308
I P + V+EP++GFY PV V DF SLYPS++ AYNLC+CT +
Sbjct: 577 -LIIPSIDEAGEDTYQG--ATVLEPKTGFYNTPVAVFDFASLYPSIIQAYNLCYCTLITD 633
Query: 1309 ILPSKENTLGVSSFRPDLHVLRDLKDELLIPPNGVM--YVPPKVRKGVLPRLLEEILSTR 1366
D+ LR+ ++ G + +V P VRK +L +LL L+ R
Sbjct: 634 ---------------NDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLLTSWLAER 678
Query: 1367 IMVKQAIKKLA-PSQQILHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1425
V++ +K P QIL + +QLALKL N YG+T G PC +A+S+
Sbjct: 679 KAVREKLKHCKDPLMQIL---LDKQQLALKLTCNAVYGFTGVS-KGMFPCLAIAESVTAQ 734
Query: 1426 GRSTLEKAISFVN---------------------ENEKWKAKVIYGDTD 1453
GR L ++ ++ ++K V+YGDTD
Sbjct: 735 GRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTD 783
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,466,203,433
Number of Sequences: 23463169
Number of extensions: 1015561617
Number of successful extensions: 2344266
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2544
Number of HSP's successfully gapped in prelim test: 1230
Number of HSP's that attempted gapping in prelim test: 2326959
Number of HSP's gapped (non-prelim): 9621
length of query: 1459
length of database: 8,064,228,071
effective HSP length: 156
effective length of query: 1303
effective length of database: 8,698,941,003
effective search space: 11334720126909
effective search space used: 11334720126909
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 84 (37.0 bits)