Query 000503
Match_columns 1459
No_of_seqs 692 out of 5632
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 10:57:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000503.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000503hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 2E-257 4E-262 2444.3 142.4 1237 202-1458 122-1376(1381)
2 PLN03130 ABC transporter C fam 100.0 2E-209 5E-214 2120.6 167.0 1428 2-1458 7-1475(1622)
3 TIGR00957 MRP_assoc_pro multi 100.0 4E-209 9E-214 2124.7 170.2 1407 17-1459 23-1522(1522)
4 PLN03232 ABC transporter C fam 100.0 2E-205 4E-210 2086.0 166.5 1429 4-1459 9-1473(1495)
5 TIGR01271 CFTR_protein cystic 100.0 4E-194 9E-199 1970.0 148.5 1230 202-1458 3-1453(1490)
6 PTZ00243 ABC transporter; Prov 100.0 4E-184 8E-189 1870.9 150.5 1250 201-1458 58-1547(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 1E-144 2E-149 1363.2 109.4 1156 268-1458 14-1226(1228)
8 PTZ00265 multidrug resistance 100.0 2E-133 4E-138 1360.1 134.3 1163 269-1457 50-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 1.7E-88 3.7E-93 812.5 58.2 561 886-1457 135-704 (716)
10 COG2274 SunT ABC-type bacterio 100.0 3.6E-80 7.8E-85 775.9 65.8 546 905-1457 160-708 (709)
11 COG1132 MdlB ABC-type multidru 100.0 1.1E-76 2.4E-81 753.7 66.5 542 906-1458 21-565 (567)
12 PRK11174 cysteine/glutathione 100.0 9.7E-76 2.1E-80 749.4 70.6 563 889-1457 13-584 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 2.3E-75 5E-80 755.9 65.8 540 903-1454 165-711 (711)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.1E-74 2.4E-79 750.5 70.2 541 906-1457 143-685 (686)
15 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.7E-74 5.9E-79 750.5 66.8 541 906-1454 161-709 (710)
16 TIGR01193 bacteriocin_ABC ABC- 100.0 7.4E-74 1.6E-78 745.5 66.6 557 886-1455 144-707 (708)
17 PRK10790 putative multidrug tr 100.0 3.8E-73 8.2E-78 725.5 70.7 543 904-1457 28-575 (592)
18 PRK11176 lipid transporter ATP 100.0 4.6E-73 1E-77 724.4 68.1 544 906-1457 32-579 (582)
19 COG4988 CydD ABC-type transpor 100.0 8.3E-73 1.8E-77 667.3 62.5 513 937-1457 38-555 (559)
20 TIGR03375 type_I_sec_LssB type 100.0 1.4E-72 3E-77 731.9 68.0 533 906-1445 154-689 (694)
21 KOG0055 Multidrug/pheromone ex 100.0 3.1E-74 6.6E-79 725.9 47.8 516 937-1457 69-588 (1228)
22 COG4987 CydC ABC-type transpor 100.0 2.4E-72 5.3E-77 650.2 58.3 499 948-1455 67-571 (573)
23 PRK11160 cysteine/glutathione 100.0 6.9E-72 1.5E-76 708.3 67.7 504 945-1456 66-573 (574)
24 TIGR02203 MsbA_lipidA lipid A 100.0 9.2E-72 2E-76 711.7 68.2 544 906-1457 21-568 (571)
25 COG2274 SunT ABC-type bacterio 100.0 5E-71 1.1E-75 693.4 68.0 543 268-829 143-703 (709)
26 TIGR01846 type_I_sec_HlyB type 100.0 3.7E-71 7.9E-76 717.9 69.1 542 908-1457 148-692 (694)
27 KOG0058 Peptide exporter, ABC 100.0 3.6E-71 7.9E-76 663.5 59.3 540 272-829 140-699 (716)
28 KOG0056 Heavy metal exporter H 100.0 3.2E-73 7E-78 638.4 37.4 493 953-1456 273-773 (790)
29 PRK13657 cyclic beta-1,2-gluca 100.0 8.4E-70 1.8E-74 693.6 71.0 545 904-1458 24-571 (588)
30 TIGR02204 MsbA_rel ABC transpo 100.0 5.6E-70 1.2E-74 695.6 68.1 547 906-1457 25-575 (576)
31 PRK11174 cysteine/glutathione 100.0 1.5E-69 3.2E-74 692.4 68.8 534 270-828 13-578 (588)
32 TIGR02868 CydC thiol reductant 100.0 6.8E-70 1.5E-74 686.9 62.4 503 906-1416 20-529 (529)
33 KOG0057 Mitochondrial Fe/S clu 100.0 2.4E-69 5.1E-74 625.4 56.4 506 939-1457 74-586 (591)
34 PRK10789 putative multidrug tr 100.0 4.4E-69 9.6E-74 682.6 64.0 508 940-1456 37-549 (569)
35 TIGR01192 chvA glucan exporter 100.0 4E-68 8.7E-73 674.6 70.3 543 905-1458 25-571 (585)
36 TIGR02857 CydD thiol reductant 100.0 4.9E-68 1.1E-72 670.1 64.1 515 906-1428 10-529 (529)
37 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.8E-67 3.8E-72 683.3 70.0 538 268-828 125-679 (686)
38 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.1E-67 4.6E-72 685.7 70.4 543 271-827 146-705 (710)
39 TIGR03375 type_I_sec_LssB type 100.0 7.5E-67 1.6E-71 678.3 71.8 535 269-823 137-689 (694)
40 TIGR00958 3a01208 Conjugate Tr 100.0 1.9E-66 4.2E-71 672.6 71.1 535 274-827 156-707 (711)
41 TIGR01193 bacteriocin_ABC ABC- 100.0 6.8E-66 1.5E-70 670.8 70.3 536 272-828 149-703 (708)
42 COG1123 ATPase components of v 100.0 6.5E-68 1.4E-72 629.8 46.8 475 605-1456 5-531 (539)
43 TIGR01842 type_I_sec_PrtD type 100.0 4.9E-66 1.1E-70 652.5 66.4 524 906-1444 13-542 (544)
44 PTZ00265 multidrug resistance 100.0 3.6E-66 7.9E-71 703.1 66.7 556 897-1457 58-728 (1466)
45 COG5265 ATM1 ABC-type transpor 100.0 6.4E-68 1.4E-72 593.9 37.5 487 962-1455 5-496 (497)
46 PRK11176 lipid transporter ATP 100.0 8.8E-65 1.9E-69 648.1 69.1 540 271-829 17-574 (582)
47 TIGR02203 MsbA_lipidA lipid A 100.0 1.9E-64 4.2E-69 644.4 68.1 535 271-824 6-558 (571)
48 PRK10261 glutathione transport 100.0 5E-66 1.1E-70 657.8 49.6 491 604-1455 11-565 (623)
49 PRK10790 putative multidrug tr 100.0 1.4E-63 3.1E-68 637.3 68.8 532 272-829 16-570 (592)
50 TIGR02868 CydC thiol reductant 100.0 1.2E-63 2.6E-68 630.1 67.0 504 272-794 6-529 (529)
51 TIGR02204 MsbA_rel ABC transpo 100.0 2E-63 4.2E-68 635.4 68.8 541 269-825 8-566 (576)
52 TIGR01846 type_I_sec_HlyB type 100.0 5.4E-63 1.2E-67 641.7 69.9 541 269-828 129-686 (694)
53 PRK15134 microcin C ABC transp 100.0 4.3E-65 9.3E-70 641.3 45.6 455 605-1447 5-518 (529)
54 PRK13549 xylose transporter AT 100.0 3.6E-65 7.7E-70 638.6 43.8 448 605-1443 5-493 (506)
55 PRK11160 cysteine/glutathione 100.0 1.6E-62 3.4E-67 622.7 68.5 534 273-828 10-568 (574)
56 TIGR01842 type_I_sec_PrtD type 100.0 1.6E-62 3.4E-67 620.6 67.8 520 276-822 3-542 (544)
57 PRK13657 cyclic beta-1,2-gluca 100.0 2.2E-62 4.9E-67 625.3 69.0 533 273-829 13-565 (588)
58 PRK10789 putative multidrug tr 100.0 2.3E-62 5E-67 621.3 66.1 522 288-828 4-544 (569)
59 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.2E-62 2.7E-67 621.3 63.0 511 906-1436 25-551 (555)
60 TIGR03269 met_CoM_red_A2 methy 100.0 8.9E-65 1.9E-69 637.6 43.1 436 607-1444 2-517 (520)
61 PRK09700 D-allose transporter 100.0 1.6E-64 3.6E-69 633.7 45.2 446 605-1441 5-495 (510)
62 TIGR00956 3a01205 Pleiotropic 100.0 3E-63 6.5E-68 674.7 59.5 248 1184-1441 718-990 (1394)
63 COG4618 ArpD ABC-type protease 100.0 6.4E-63 1.4E-67 565.7 52.3 530 267-823 11-561 (580)
64 PRK10762 D-ribose transporter 100.0 1.5E-64 3.2E-69 632.3 42.1 436 605-1443 4-483 (501)
65 COG1132 MdlB ABC-type multidru 100.0 8E-62 1.7E-66 617.6 66.8 528 277-830 13-560 (567)
66 PLN03232 ABC transporter C fam 100.0 3.4E-62 7.3E-67 671.5 68.1 548 886-1457 289-840 (1495)
67 PLN03130 ABC transporter C fam 100.0 8.1E-62 1.8E-66 666.7 68.7 545 888-1457 291-840 (1622)
68 TIGR02857 CydD thiol reductant 100.0 2E-61 4.4E-66 609.8 66.4 507 278-806 2-529 (529)
69 PRK15439 autoinducer 2 ABC tra 100.0 6.9E-64 1.5E-68 626.4 43.5 451 604-1445 10-493 (510)
70 TIGR02633 xylG D-xylose ABC tr 100.0 9.8E-64 2.1E-68 625.7 43.6 447 606-1442 2-490 (500)
71 TIGR01257 rim_protein retinal- 100.0 3.3E-61 7.1E-66 648.8 69.9 220 1220-1445 1935-2160(2272)
72 COG4988 CydD ABC-type transpor 100.0 5E-61 1.1E-65 567.4 62.3 523 285-830 6-551 (559)
73 TIGR01192 chvA glucan exporter 100.0 1.4E-60 3.1E-65 605.6 70.4 533 273-829 13-565 (585)
74 PRK15064 ABC transporter ATP-b 100.0 2.5E-62 5.3E-67 616.4 53.7 202 1221-1446 318-527 (530)
75 PRK11288 araG L-arabinose tran 100.0 2E-63 4.4E-68 622.0 43.5 443 605-1443 4-484 (501)
76 PRK10982 galactose/methyl gala 100.0 1E-62 2.2E-67 614.7 43.7 435 609-1443 2-479 (491)
77 PRK10522 multidrug transporter 100.0 3.8E-60 8.1E-65 598.8 63.1 469 953-1444 62-539 (547)
78 PRK11819 putative ABC transpor 100.0 6.8E-61 1.5E-65 605.0 53.5 202 1221-1446 323-535 (556)
79 PRK10938 putative molybdenum t 100.0 4.2E-62 9.1E-67 609.5 41.2 442 606-1437 4-485 (490)
80 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.4E-60 3E-65 602.2 51.5 482 605-1445 4-532 (552)
81 COG4172 ABC-type uncharacteriz 100.0 1.2E-60 2.5E-65 530.6 40.9 460 604-1453 5-525 (534)
82 KOG0057 Mitochondrial Fe/S clu 100.0 5.3E-59 1.1E-63 539.5 55.3 513 289-825 40-577 (591)
83 TIGR00957 MRP_assoc_pro multi 100.0 8.8E-59 1.9E-63 638.7 67.6 545 268-828 953-1514(1522)
84 PRK10636 putative ABC transpor 100.0 1.9E-59 4.1E-64 597.5 52.4 200 1221-1444 311-517 (638)
85 KOG0054 Multidrug resistance-a 100.0 6.7E-58 1.5E-62 592.7 62.9 548 887-1456 190-742 (1381)
86 PRK11147 ABC transporter ATPas 100.0 4.1E-58 8.8E-63 587.2 50.8 203 1222-1444 319-528 (635)
87 PLN03140 ABC transporter G fam 100.0 1.4E-57 3.1E-62 615.5 58.6 211 1222-1440 867-1106(1470)
88 COG4987 CydC ABC-type transpor 100.0 2.4E-56 5.3E-61 517.3 58.7 539 270-829 8-568 (573)
89 PTZ00243 ABC transporter; Prov 100.0 3.1E-56 6.7E-61 611.2 67.9 475 348-828 1027-1540(1560)
90 COG4618 ArpD ABC-type protease 100.0 1.1E-56 2.4E-61 514.4 48.4 481 945-1445 69-561 (580)
91 PLN03073 ABC transporter F fam 100.0 1.4E-56 3.1E-61 571.2 51.8 199 1221-1443 507-713 (718)
92 TIGR01194 cyc_pep_trnsptr cycl 100.0 2.1E-55 4.7E-60 555.4 61.9 522 273-814 11-551 (555)
93 KOG0056 Heavy metal exporter H 100.0 1.6E-57 3.5E-62 511.8 37.1 521 286-828 222-768 (790)
94 COG0488 Uup ATPase components 100.0 7.1E-56 1.5E-60 540.1 48.0 484 605-1446 3-527 (530)
95 PRK13409 putative ATPase RIL; 100.0 4.2E-56 9.2E-61 558.0 38.7 191 1222-1438 340-536 (590)
96 TIGR00954 3a01203 Peroxysomal 100.0 2.7E-54 5.9E-59 552.1 55.4 513 900-1430 97-653 (659)
97 TIGR01271 CFTR_protein cystic 100.0 2.7E-53 5.8E-58 582.5 67.7 539 887-1454 69-645 (1490)
98 PRK10522 multidrug transporter 100.0 6.8E-53 1.5E-57 532.8 62.4 508 269-814 3-530 (547)
99 COG1129 MglA ABC-type sugar tr 100.0 1.9E-53 4E-58 503.6 40.6 442 604-1441 7-487 (500)
100 TIGR00954 3a01203 Peroxysomal 100.0 3.2E-50 6.9E-55 514.7 59.8 516 280-808 97-653 (659)
101 COG5265 ATM1 ABC-type transpor 100.0 4.3E-51 9.2E-56 458.6 37.1 466 347-829 10-493 (497)
102 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.7E-52 8E-57 476.1 27.3 236 1221-1458 1-238 (275)
103 COG3845 ABC-type uncharacteriz 100.0 7.4E-51 1.6E-55 469.4 37.1 442 604-1441 3-489 (501)
104 PRK14257 phosphate ABC transpo 100.0 1.3E-48 2.9E-53 458.3 27.4 229 1215-1448 73-317 (329)
105 COG1126 GlnQ ABC-type polar am 100.0 7.7E-46 1.7E-50 385.8 23.5 220 1222-1448 2-229 (240)
106 COG1135 AbcC ABC-type metal io 100.0 3.5E-45 7.6E-50 399.6 21.9 221 1223-1448 2-235 (339)
107 COG1117 PstB ABC-type phosphat 100.0 7.8E-45 1.7E-49 375.7 19.0 220 1221-1447 6-240 (253)
108 cd03288 ABCC_SUR2 The SUR doma 100.0 1E-43 2.2E-48 406.3 29.0 238 1219-1456 16-255 (257)
109 KOG0927 Predicted transporter 100.0 5.9E-44 1.3E-48 412.2 26.6 196 1222-1439 389-591 (614)
110 COG1125 OpuBA ABC-type proline 100.0 5.2E-44 1.1E-48 378.2 20.9 223 1223-1452 2-233 (309)
111 cd03252 ABCC_Hemolysin The ABC 100.0 8.9E-43 1.9E-47 394.5 27.8 232 1223-1455 1-235 (237)
112 PRK14257 phosphate ABC transpo 100.0 2.2E-43 4.7E-48 414.2 22.9 262 528-822 23-313 (329)
113 cd03244 ABCC_MRP_domain2 Domai 100.0 2E-42 4.4E-47 387.4 26.4 219 1221-1439 1-221 (221)
114 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.1E-41 2.3E-46 377.3 25.6 207 1217-1439 1-207 (207)
115 KOG0062 ATPase component of AB 100.0 4.3E-42 9.4E-47 394.8 22.6 191 1220-1435 360-559 (582)
116 PRK13631 cbiO cobalt transport 100.0 1.1E-41 2.3E-46 398.8 26.5 223 1219-1446 18-267 (320)
117 TIGR02314 ABC_MetN D-methionin 100.0 1.3E-41 2.7E-46 399.6 26.6 223 1223-1450 2-236 (343)
118 cd03251 ABCC_MsbA MsbA is an e 100.0 1.9E-41 4E-46 383.0 26.3 229 1223-1452 1-232 (234)
119 cd03254 ABCC_Glucan_exporter_l 100.0 3.7E-41 8.1E-46 379.3 26.6 225 1221-1446 1-228 (229)
120 KOG0065 Pleiotropic drug resis 100.0 1.1E-40 2.3E-45 420.9 33.5 199 1235-1441 802-1018(1391)
121 COG1120 FepC ABC-type cobalami 100.0 7.7E-42 1.7E-46 376.6 20.2 213 1222-1445 2-229 (258)
122 COG1124 DppF ABC-type dipeptid 100.0 1.8E-41 3.8E-46 361.3 21.4 225 1222-1454 3-241 (252)
123 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.6E-41 3.6E-46 371.7 21.6 210 1222-1446 4-229 (254)
124 cd03253 ABCC_ATM1_transporter 100.0 7.2E-41 1.6E-45 378.7 27.6 232 1223-1456 1-235 (236)
125 COG1126 GlnQ ABC-type polar am 100.0 1E-41 2.2E-46 355.1 18.3 199 606-822 3-225 (240)
126 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.1E-40 2.4E-45 377.6 26.6 231 1223-1454 1-235 (238)
127 COG3839 MalK ABC-type sugar tr 100.0 6.6E-41 1.4E-45 383.0 24.2 221 1222-1451 3-230 (338)
128 COG1127 Ttg2A ABC-type transpo 100.0 8.1E-41 1.8E-45 353.7 22.8 228 1221-1455 7-246 (263)
129 PRK14250 phosphate ABC transpo 100.0 1.9E-40 4.1E-45 375.8 26.5 226 1222-1455 3-232 (241)
130 COG1122 CbiO ABC-type cobalt t 100.0 1E-40 2.2E-45 368.9 22.6 215 1222-1446 3-230 (235)
131 cd03245 ABCC_bacteriocin_expor 100.0 2.3E-40 5E-45 370.5 25.6 217 1221-1437 1-220 (220)
132 cd03261 ABC_Org_Solvent_Resist 100.0 1.8E-40 3.9E-45 375.0 24.8 217 1223-1446 1-228 (235)
133 PRK11153 metN DL-methionine tr 100.0 3.2E-40 6.9E-45 390.9 27.3 224 1223-1451 2-237 (343)
134 cd03260 ABC_PstB_phosphate_tra 100.0 2.2E-40 4.8E-45 372.4 22.6 213 1223-1442 1-227 (227)
135 PRK13637 cbiO cobalt transport 100.0 5.3E-40 1.2E-44 380.8 25.4 218 1223-1445 3-235 (287)
136 PRK14269 phosphate ABC transpo 100.0 7.6E-40 1.6E-44 372.3 26.1 219 1222-1447 2-233 (246)
137 PRK13650 cbiO cobalt transport 100.0 6.5E-40 1.4E-44 378.8 25.8 219 1222-1445 4-230 (279)
138 cd03219 ABC_Mj1267_LivG_branch 100.0 3.6E-40 7.8E-45 373.0 23.0 222 1223-1446 1-234 (236)
139 COG1136 SalX ABC-type antimicr 100.0 5.1E-40 1.1E-44 355.3 22.8 208 1223-1435 2-222 (226)
140 PRK11432 fbpC ferric transport 100.0 8.2E-40 1.8E-44 386.4 26.8 222 1221-1451 5-233 (351)
141 PRK11650 ugpC glycerol-3-phosp 100.0 6.7E-40 1.5E-44 388.4 26.1 222 1222-1451 3-231 (356)
142 COG3638 ABC-type phosphate/pho 100.0 3.3E-40 7.2E-45 348.2 20.7 220 1222-1454 3-244 (258)
143 cd03263 ABC_subfamily_A The AB 100.0 3.9E-40 8.5E-45 368.6 22.5 214 1223-1442 1-219 (220)
144 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6.6E-40 1.4E-44 371.9 24.2 225 1223-1453 1-235 (242)
145 TIGR03265 PhnT2 putative 2-ami 100.0 9.1E-40 2E-44 386.8 26.2 221 1222-1451 4-231 (353)
146 PRK13646 cbiO cobalt transport 100.0 7.9E-40 1.7E-44 379.4 25.0 218 1223-1445 3-236 (286)
147 cd03289 ABCC_CFTR2 The CFTR su 100.0 4.2E-40 9.1E-45 376.8 22.3 219 605-830 2-233 (275)
148 COG4615 PvdE ABC-type sideroph 100.0 3.1E-37 6.7E-42 342.5 43.9 473 941-1437 50-530 (546)
149 cd03296 ABC_CysA_sulfate_impor 100.0 9.5E-40 2.1E-44 370.0 24.7 216 1223-1447 3-229 (239)
150 PRK10744 pstB phosphate transp 100.0 1.1E-39 2.4E-44 373.9 25.5 221 1220-1447 11-247 (260)
151 TIGR00972 3a0107s01c2 phosphat 100.0 1.1E-39 2.5E-44 371.2 25.2 221 1223-1450 2-238 (247)
152 cd03224 ABC_TM1139_LivF_branch 100.0 7.3E-40 1.6E-44 367.1 23.0 215 1223-1444 1-221 (222)
153 COG1135 AbcC ABC-type metal io 100.0 2.6E-40 5.7E-45 361.5 18.3 205 606-822 2-231 (339)
154 cd03258 ABC_MetN_methionine_tr 100.0 7.8E-40 1.7E-44 369.5 22.6 219 1223-1446 2-232 (233)
155 PRK14273 phosphate ABC transpo 100.0 1.3E-39 2.7E-44 372.4 24.6 223 1222-1451 7-245 (254)
156 PRK13643 cbiO cobalt transport 100.0 1.5E-39 3.3E-44 377.1 25.6 218 1223-1445 2-234 (288)
157 COG2884 FtsE Predicted ATPase 100.0 6.1E-40 1.3E-44 333.6 19.3 207 1223-1439 2-221 (223)
158 TIGR01186 proV glycine betaine 100.0 9.7E-40 2.1E-44 385.4 23.8 209 1237-1450 6-225 (363)
159 cd03248 ABCC_TAP TAP, the Tran 100.0 1.3E-39 2.9E-44 365.8 23.8 215 1219-1433 8-226 (226)
160 PRK13632 cbiO cobalt transport 100.0 1.8E-39 4E-44 373.9 25.5 220 1222-1446 7-233 (271)
161 PRK14242 phosphate transporter 100.0 1.7E-39 3.6E-44 371.4 24.7 219 1222-1447 6-240 (253)
162 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.8E-39 3.9E-44 367.0 24.5 215 1223-1445 2-222 (236)
163 PRK14259 phosphate ABC transpo 100.0 2.2E-39 4.7E-44 372.7 25.4 223 1218-1447 9-256 (269)
164 cd03256 ABC_PhnC_transporter A 100.0 1.5E-39 3.2E-44 369.3 23.7 215 1223-1444 1-234 (241)
165 PRK13647 cbiO cobalt transport 100.0 2.1E-39 4.5E-44 373.6 25.1 216 1222-1443 4-226 (274)
166 PRK10851 sulfate/thiosulfate t 100.0 3.2E-39 6.9E-44 382.1 27.3 220 1222-1450 2-232 (353)
167 PRK13635 cbiO cobalt transport 100.0 2.4E-39 5.2E-44 373.8 25.6 219 1222-1445 5-230 (279)
168 PRK13636 cbiO cobalt transport 100.0 2.8E-39 6.1E-44 374.3 26.0 218 1222-1445 5-232 (283)
169 TIGR02315 ABC_phnC phosphonate 100.0 1.8E-39 4E-44 368.9 24.0 220 1223-1443 2-234 (243)
170 PRK13537 nodulation ABC transp 100.0 1.7E-39 3.6E-44 379.1 23.9 217 1221-1445 6-228 (306)
171 PRK11629 lolD lipoprotein tran 100.0 3.7E-39 8E-44 363.7 25.9 212 1222-1438 5-228 (233)
172 PRK14267 phosphate ABC transpo 100.0 2E-39 4.3E-44 370.7 23.6 224 1222-1452 4-245 (253)
173 COG4178 ABC-type uncharacteriz 100.0 1.8E-36 3.9E-41 365.6 50.3 492 914-1429 58-587 (604)
174 PRK13634 cbiO cobalt transport 100.0 2.4E-39 5.3E-44 375.8 24.6 218 1223-1445 3-236 (290)
175 TIGR03258 PhnT 2-aminoethylpho 100.0 2.1E-39 4.6E-44 384.0 24.5 222 1220-1450 3-234 (362)
176 COG3842 PotA ABC-type spermidi 100.0 8E-40 1.7E-44 376.1 20.1 218 1221-1451 4-233 (352)
177 COG1116 TauB ABC-type nitrate/ 100.0 3E-39 6.5E-44 348.4 22.9 196 1222-1433 3-211 (248)
178 TIGR00960 3a0501s02 Type II (G 100.0 1.5E-39 3.2E-44 362.8 21.1 202 1223-1433 2-216 (216)
179 PRK14247 phosphate ABC transpo 100.0 4.4E-39 9.6E-44 367.2 25.5 226 1222-1454 3-244 (250)
180 PRK15079 oligopeptide ABC tran 100.0 3E-39 6.6E-44 379.5 24.7 226 1222-1452 8-259 (331)
181 cd03259 ABC_Carb_Solutes_like 100.0 1.6E-39 3.4E-44 361.8 21.1 206 1223-1437 1-213 (213)
182 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.4E-39 3E-44 363.6 20.7 206 1223-1433 1-218 (218)
183 PRK13651 cobalt transporter AT 100.0 5.1E-39 1.1E-43 374.2 26.0 218 1223-1445 3-255 (305)
184 COG3840 ThiQ ABC-type thiamine 100.0 3E-39 6.5E-44 325.3 20.3 211 1223-1448 2-223 (231)
185 TIGR03411 urea_trans_UrtD urea 100.0 4.1E-39 8.9E-44 365.7 24.2 219 1223-1444 3-231 (242)
186 PRK14235 phosphate transporter 100.0 5.9E-39 1.3E-43 368.9 25.7 222 1219-1447 16-254 (267)
187 PRK13642 cbiO cobalt transport 100.0 4.7E-39 1E-43 371.5 25.0 220 1222-1446 4-231 (277)
188 COG1116 TauB ABC-type nitrate/ 100.0 1.4E-39 3.1E-44 350.8 19.2 191 605-812 3-212 (248)
189 cd03218 ABC_YhbG The ABC trans 100.0 2.5E-39 5.4E-44 365.2 22.1 216 1223-1445 1-223 (232)
190 PRK11831 putative ABC transpor 100.0 4.1E-39 8.9E-44 370.6 24.1 227 1222-1455 7-244 (269)
191 PRK09493 glnQ glutamine ABC tr 100.0 6.9E-39 1.5E-43 363.3 25.5 217 1223-1446 2-227 (240)
192 PRK11000 maltose/maltodextrin 100.0 4.7E-39 1E-43 383.9 25.2 220 1222-1450 3-229 (369)
193 PRK14251 phosphate ABC transpo 100.0 3.8E-39 8.1E-44 368.0 23.3 223 1222-1451 4-242 (251)
194 PRK11264 putative amino-acid A 100.0 1.1E-38 2.4E-43 364.1 27.1 227 1222-1455 3-245 (250)
195 PRK09452 potA putrescine/sperm 100.0 6E-39 1.3E-43 381.4 25.8 221 1221-1450 13-240 (375)
196 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.8E-38 3.8E-43 364.8 28.8 216 1220-1453 37-255 (282)
197 TIGR03005 ectoine_ehuA ectoine 100.0 9.9E-39 2.1E-43 364.6 26.6 218 1223-1447 1-239 (252)
198 cd03266 ABC_NatA_sodium_export 100.0 3E-39 6.5E-44 361.0 21.8 209 1223-1437 2-218 (218)
199 PRK10619 histidine/lysine/argi 100.0 6.7E-39 1.5E-43 366.9 25.2 221 1220-1447 3-244 (257)
200 cd03247 ABCC_cytochrome_bd The 100.0 3.7E-39 8E-44 348.1 21.5 178 1223-1437 1-178 (178)
201 TIGR02211 LolD_lipo_ex lipopro 100.0 4E-39 8.8E-44 360.7 22.6 207 1223-1434 2-220 (221)
202 PRK14237 phosphate transporter 100.0 8.1E-39 1.7E-43 367.8 25.5 220 1221-1447 19-254 (267)
203 PRK13648 cbiO cobalt transport 100.0 8.6E-39 1.9E-43 368.2 25.4 219 1222-1445 7-232 (269)
204 PRK09536 btuD corrinoid ABC tr 100.0 8.2E-39 1.8E-43 382.0 26.0 220 1222-1454 3-236 (402)
205 PRK13640 cbiO cobalt transport 100.0 8.4E-39 1.8E-43 370.1 25.3 220 1221-1445 4-233 (282)
206 PRK13649 cbiO cobalt transport 100.0 6.8E-39 1.5E-43 371.4 24.6 218 1223-1445 3-235 (280)
207 PRK13645 cbiO cobalt transport 100.0 6.7E-39 1.5E-43 372.8 24.6 221 1220-1445 4-241 (289)
208 PRK14244 phosphate ABC transpo 100.0 5.1E-39 1.1E-43 366.8 23.1 221 1223-1450 6-243 (251)
209 PRK14245 phosphate ABC transpo 100.0 5.6E-39 1.2E-43 366.2 23.3 220 1222-1448 3-238 (250)
210 PRK11308 dppF dipeptide transp 100.0 9.2E-39 2E-43 375.2 25.7 227 1222-1453 5-253 (327)
211 cd03250 ABCC_MRP_domain1 Domai 100.0 7.1E-39 1.5E-43 354.0 23.3 197 1223-1432 1-204 (204)
212 PRK14239 phosphate transporter 100.0 7.4E-39 1.6E-43 365.9 24.2 219 1222-1447 5-239 (252)
213 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.9E-39 1.7E-43 368.0 24.4 221 1224-1451 26-257 (269)
214 PRK14268 phosphate ABC transpo 100.0 7.9E-39 1.7E-43 366.4 24.2 222 1222-1450 12-248 (258)
215 PRK14274 phosphate ABC transpo 100.0 1E-38 2.3E-43 365.8 25.2 221 1222-1449 12-248 (259)
216 PRK14240 phosphate transporter 100.0 8E-39 1.7E-43 365.1 24.1 221 1221-1448 2-238 (250)
217 PRK14262 phosphate ABC transpo 100.0 7.7E-39 1.7E-43 365.2 23.8 225 1222-1453 3-243 (250)
218 TIGR02769 nickel_nikE nickel i 100.0 8.4E-39 1.8E-43 367.4 24.2 227 1223-1454 3-250 (265)
219 PRK10895 lipopolysaccharide AB 100.0 9E-39 2E-43 362.6 24.0 217 1222-1445 3-227 (241)
220 cd03264 ABC_drug_resistance_li 100.0 7.3E-39 1.6E-43 355.9 22.6 202 1223-1437 1-211 (211)
221 PRK11607 potG putrescine trans 100.0 1.5E-38 3.2E-43 378.8 26.7 222 1221-1451 18-246 (377)
222 cd03225 ABC_cobalt_CbiO_domain 100.0 5.9E-39 1.3E-43 356.7 21.8 204 1224-1432 1-211 (211)
223 PRK14256 phosphate ABC transpo 100.0 1.1E-38 2.5E-43 364.1 24.7 222 1220-1448 2-240 (252)
224 PRK11124 artP arginine transpo 100.0 1.8E-38 3.8E-43 360.4 26.0 218 1223-1447 3-233 (242)
225 PRK13644 cbiO cobalt transport 100.0 1.3E-38 2.9E-43 366.9 25.3 217 1223-1445 2-225 (274)
226 cd03265 ABC_DrrA DrrA is the A 100.0 6.9E-39 1.5E-43 358.4 22.2 212 1223-1442 1-219 (220)
227 PRK13652 cbiO cobalt transport 100.0 1.3E-38 2.9E-43 367.7 25.3 217 1223-1445 4-228 (277)
228 PRK11614 livF leucine/isoleuci 100.0 1E-38 2.2E-43 361.3 23.7 217 1222-1445 5-227 (237)
229 TIGR03410 urea_trans_UrtE urea 100.0 6.2E-39 1.3E-43 361.4 21.7 211 1223-1443 1-220 (230)
230 PRK13641 cbiO cobalt transport 100.0 1.4E-38 3.1E-43 369.1 25.2 219 1222-1445 2-235 (287)
231 COG1125 OpuBA ABC-type proline 100.0 1.8E-39 4E-44 343.8 16.0 203 606-824 2-227 (309)
232 PRK14248 phosphate ABC transpo 100.0 2.6E-38 5.5E-43 364.2 26.9 219 1222-1447 21-255 (268)
233 PRK14236 phosphate transporter 100.0 1.9E-38 4.1E-43 365.7 25.8 221 1220-1447 23-259 (272)
234 PRK14249 phosphate ABC transpo 100.0 1.4E-38 3E-43 363.1 24.5 219 1222-1447 4-238 (251)
235 PRK14266 phosphate ABC transpo 100.0 1.3E-38 2.8E-43 363.3 24.1 221 1223-1450 4-240 (250)
236 cd03257 ABC_NikE_OppD_transpor 100.0 9.2E-39 2E-43 359.7 22.4 211 1223-1437 2-228 (228)
237 PRK09473 oppD oligopeptide tra 100.0 2.8E-38 6E-43 371.6 27.3 226 1222-1452 12-259 (330)
238 PRK14270 phosphate ABC transpo 100.0 1.7E-38 3.7E-43 362.4 24.8 218 1222-1446 4-237 (251)
239 cd03293 ABC_NrtD_SsuB_transpor 100.0 6.9E-39 1.5E-43 358.4 21.0 207 1223-1439 1-218 (220)
240 PRK14260 phosphate ABC transpo 100.0 1.2E-38 2.7E-43 365.0 23.5 221 1221-1448 6-247 (259)
241 cd03226 ABC_cobalt_CbiO_domain 100.0 8.4E-39 1.8E-43 353.7 21.3 198 1224-1434 1-205 (205)
242 PRK11022 dppD dipeptide transp 100.0 2.7E-38 5.9E-43 371.5 26.7 226 1222-1452 3-251 (326)
243 PRK14243 phosphate transporter 100.0 2.6E-38 5.6E-43 363.0 25.8 219 1222-1447 10-251 (264)
244 PRK14261 phosphate ABC transpo 100.0 1.7E-38 3.6E-43 362.9 24.2 226 1222-1454 6-247 (253)
245 TIGR01288 nodI ATP-binding ABC 100.0 1.3E-38 2.8E-43 372.4 23.7 216 1222-1445 4-225 (303)
246 PRK14238 phosphate transporter 100.0 3.3E-38 7.1E-43 363.3 26.6 221 1220-1447 22-258 (271)
247 TIGR03522 GldA_ABC_ATP gliding 100.0 1.6E-38 3.4E-43 371.0 24.2 215 1223-1445 3-222 (301)
248 cd03301 ABC_MalK_N The N-termi 100.0 1.1E-38 2.5E-43 355.0 21.8 206 1223-1437 1-213 (213)
249 PRK13536 nodulation factor exp 100.0 1.6E-38 3.4E-43 374.3 24.2 216 1222-1445 41-262 (340)
250 PRK13633 cobalt transporter AT 100.0 1.8E-38 3.9E-43 367.2 24.2 219 1222-1445 4-234 (280)
251 PRK14252 phosphate ABC transpo 100.0 2.3E-38 5E-43 364.0 24.9 223 1217-1446 11-251 (265)
252 PRK14271 phosphate ABC transpo 100.0 8E-38 1.7E-42 360.6 29.3 219 1222-1447 21-254 (276)
253 PRK14254 phosphate ABC transpo 100.0 3.3E-38 7.2E-43 365.1 26.2 220 1221-1447 38-272 (285)
254 PRK10070 glycine betaine trans 100.0 2.3E-38 4.9E-43 377.9 25.3 208 1238-1450 42-260 (400)
255 cd03268 ABC_BcrA_bacitracin_re 100.0 8.3E-39 1.8E-43 354.6 20.0 202 1223-1437 1-208 (208)
256 TIGR00968 3a0106s01 sulfate AB 100.0 2.7E-38 5.9E-43 357.3 24.5 215 1223-1446 1-222 (237)
257 PRK11701 phnK phosphonate C-P 100.0 5.4E-38 1.2E-42 359.7 27.2 225 1222-1453 6-250 (258)
258 cd03292 ABC_FtsE_transporter F 100.0 1.2E-38 2.7E-43 355.1 21.2 205 1223-1433 1-214 (214)
259 PRK11231 fecE iron-dicitrate t 100.0 1.9E-38 4.2E-43 362.7 23.4 216 1223-1445 3-228 (255)
260 PRK13639 cbiO cobalt transport 100.0 3.2E-38 7E-43 364.1 25.0 217 1223-1445 2-227 (275)
261 PRK10575 iron-hydroxamate tran 100.0 2.1E-38 4.5E-43 364.2 23.3 213 1222-1445 11-238 (265)
262 cd03246 ABCC_Protease_Secretio 100.0 2.1E-38 4.5E-43 340.5 21.5 172 1223-1433 1-173 (173)
263 PRK13638 cbiO cobalt transport 100.0 2.7E-38 5.9E-43 364.4 23.8 217 1223-1446 2-227 (271)
264 TIGR03415 ABC_choXWV_ATP choli 100.0 2.9E-38 6.4E-43 374.2 24.5 209 1238-1451 38-261 (382)
265 PRK11300 livG leucine/isoleuci 100.0 3.5E-38 7.6E-43 361.0 24.4 220 1222-1445 5-244 (255)
266 COG1120 FepC ABC-type cobalami 100.0 1.3E-38 2.8E-43 351.1 19.6 201 605-822 2-228 (258)
267 PRK13548 hmuV hemin importer A 100.0 4.6E-38 1E-42 359.6 24.9 216 1223-1445 3-231 (258)
268 PRK14263 phosphate ABC transpo 100.0 4.7E-38 1E-42 359.7 24.9 222 1222-1450 8-251 (261)
269 PRK14272 phosphate ABC transpo 100.0 3.7E-38 7.9E-43 360.2 23.9 224 1222-1452 4-244 (252)
270 PRK14241 phosphate transporter 100.0 3.5E-38 7.5E-43 361.2 23.8 219 1222-1447 4-245 (258)
271 PRK14253 phosphate ABC transpo 100.0 4.3E-38 9.4E-43 358.8 24.3 219 1222-1447 3-236 (249)
272 PRK10253 iron-enterobactin tra 100.0 4E-38 8.7E-43 361.8 24.1 221 1221-1444 6-233 (265)
273 PRK14275 phosphate ABC transpo 100.0 4E-38 8.6E-43 365.0 24.1 225 1220-1451 37-277 (286)
274 cd03300 ABC_PotA_N PotA is an 100.0 4.2E-38 9E-43 354.8 23.5 217 1223-1447 1-223 (232)
275 cd03269 ABC_putative_ATPase Th 100.0 1.8E-38 3.8E-43 352.5 20.0 204 1223-1437 1-210 (210)
276 PRK11247 ssuB aliphatic sulfon 100.0 6E-38 1.3E-42 356.9 24.6 204 1221-1440 11-219 (257)
277 PRK14264 phosphate ABC transpo 100.0 5E-38 1.1E-42 367.2 24.6 220 1220-1446 43-291 (305)
278 TIGR02673 FtsE cell division A 100.0 2.5E-38 5.3E-43 352.6 21.0 200 1223-1432 2-214 (214)
279 PRK14258 phosphate ABC transpo 100.0 6.3E-38 1.4E-42 359.3 25.0 221 1221-1448 6-249 (261)
280 PRK14265 phosphate ABC transpo 100.0 5.6E-38 1.2E-42 361.7 24.6 221 1220-1447 18-261 (274)
281 PRK15112 antimicrobial peptide 100.0 1.1E-37 2.3E-42 358.5 26.7 229 1222-1455 4-251 (267)
282 PRK10584 putative ABC transpor 100.0 4.8E-38 1E-42 353.6 23.3 210 1222-1436 6-227 (228)
283 COG1131 CcmA ABC-type multidru 100.0 2.8E-38 6.1E-43 365.1 21.7 213 1222-1445 4-227 (293)
284 PRK10908 cell division protein 100.0 8.1E-38 1.7E-42 350.3 24.8 206 1223-1434 2-216 (222)
285 cd03250 ABCC_MRP_domain1 Domai 100.0 4.3E-38 9.4E-43 347.7 22.2 204 606-810 1-204 (204)
286 cd03298 ABC_ThiQ_thiamine_tran 100.0 5.9E-38 1.3E-42 348.6 23.1 200 1223-1437 1-211 (211)
287 cd03290 ABCC_SUR1_N The SUR do 100.0 6.5E-38 1.4E-42 350.0 23.5 209 1223-1432 1-218 (218)
288 PRK15093 antimicrobial peptide 100.0 5.9E-38 1.3E-42 370.0 24.4 226 1222-1452 3-256 (330)
289 TIGR03873 F420-0_ABC_ATP propo 100.0 6.7E-38 1.4E-42 358.5 24.0 215 1223-1444 2-226 (256)
290 COG1127 Ttg2A ABC-type transpo 100.0 4.4E-38 9.6E-43 333.0 20.7 204 603-824 6-237 (263)
291 PRK14255 phosphate ABC transpo 100.0 7.1E-38 1.5E-42 357.7 23.9 222 1222-1450 5-242 (252)
292 PRK10247 putative ABC transpor 100.0 3.5E-38 7.5E-43 353.5 20.8 211 1222-1440 7-223 (225)
293 PRK14246 phosphate ABC transpo 100.0 1.4E-37 3E-42 355.0 26.1 226 1222-1454 10-251 (257)
294 COG1118 CysA ABC-type sulfate/ 100.0 2.4E-38 5.2E-43 345.0 18.7 219 1223-1450 3-233 (345)
295 cd03262 ABC_HisP_GlnQ_permease 100.0 4.2E-38 9E-43 350.5 20.8 204 1223-1433 1-213 (213)
296 COG4555 NatA ABC-type Na+ tran 100.0 1.3E-38 2.9E-43 326.2 15.0 217 1223-1446 2-224 (245)
297 cd03299 ABC_ModC_like Archeal 100.0 2E-37 4.4E-42 349.7 26.2 214 1223-1446 1-221 (235)
298 PRK13547 hmuV hemin importer A 100.0 1E-37 2.2E-42 358.0 24.1 220 1223-1444 2-244 (272)
299 PRK10771 thiQ thiamine transpo 100.0 1.6E-37 3.5E-42 350.1 25.1 209 1223-1446 2-221 (232)
300 cd03235 ABC_Metallic_Cations A 100.0 3.9E-38 8.5E-43 350.6 19.9 201 1224-1437 1-213 (213)
301 TIGR01188 drrA daunorubicin re 100.0 5.8E-38 1.3E-42 366.7 22.2 207 1231-1445 2-214 (302)
302 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 8E-38 1.7E-42 342.7 21.7 200 604-822 3-227 (254)
303 COG3840 ThiQ ABC-type thiamine 100.0 3.2E-38 6.8E-43 317.9 16.8 196 607-822 3-219 (231)
304 COG3839 MalK ABC-type sugar tr 100.0 4.6E-38 1E-42 359.6 20.4 203 605-824 3-225 (338)
305 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.4E-37 5.1E-42 355.4 25.7 212 602-822 36-247 (282)
306 PRK10418 nikD nickel transport 100.0 1.6E-37 3.6E-42 354.6 24.2 221 1222-1456 4-243 (254)
307 COG1117 PstB ABC-type phosphat 100.0 2.1E-38 4.5E-43 328.2 15.0 204 604-822 6-237 (253)
308 COG0410 LivF ABC-type branched 100.0 1.5E-37 3.3E-42 329.1 21.7 220 1222-1447 3-229 (237)
309 COG1136 SalX ABC-type antimicr 100.0 1.1E-37 2.5E-42 337.0 20.9 194 607-812 3-221 (226)
310 TIGR01978 sufC FeS assembly AT 100.0 1.3E-37 2.9E-42 353.7 22.5 215 1223-1444 1-234 (243)
311 PRK10419 nikE nickel transport 100.0 2.1E-37 4.7E-42 355.9 24.4 231 1222-1455 3-251 (268)
312 cd03234 ABCG_White The White s 100.0 1.3E-37 2.8E-42 349.4 20.9 212 1223-1437 4-226 (226)
313 PRK11248 tauB taurine transpor 100.0 2.1E-37 4.6E-42 353.1 22.8 205 1223-1439 2-215 (255)
314 PRK11144 modC molybdate transp 100.0 3E-37 6.6E-42 366.8 24.8 212 1223-1448 2-222 (352)
315 TIGR02323 CP_lyasePhnK phospho 100.0 3.6E-37 7.8E-42 352.1 24.5 226 1222-1454 3-248 (253)
316 TIGR02142 modC_ABC molybdenum 100.0 3.2E-37 6.8E-42 367.3 24.3 216 1227-1451 4-228 (354)
317 COG1137 YhbG ABC-type (unclass 100.0 2.2E-38 4.8E-43 324.2 12.2 225 1221-1447 3-231 (243)
318 cd03252 ABCC_Hemolysin The ABC 100.0 3.9E-37 8.5E-42 348.4 23.6 212 606-823 1-226 (237)
319 PRK09984 phosphonate/organopho 100.0 4.3E-37 9.4E-42 353.0 24.2 229 1222-1455 4-250 (262)
320 TIGR01277 thiQ thiamine ABC tr 100.0 4.2E-37 9.2E-42 342.1 23.3 201 1223-1438 1-212 (213)
321 TIGR02982 heterocyst_DevA ABC 100.0 2.1E-37 4.5E-42 346.3 20.9 206 1223-1433 2-219 (220)
322 COG1118 CysA ABC-type sulfate/ 100.0 1E-37 2.2E-42 340.0 17.6 202 606-824 3-229 (345)
323 COG3842 PotA ABC-type spermidi 100.0 1.3E-37 2.8E-42 357.9 18.2 203 604-823 4-227 (352)
324 cd03254 ABCC_Glucan_exporter_l 100.0 8.3E-37 1.8E-41 343.9 23.6 211 605-822 2-226 (229)
325 cd03228 ABCC_MRP_Like The MRP 100.0 5.9E-37 1.3E-41 328.5 21.2 171 1223-1432 1-171 (171)
326 cd03288 ABCC_SUR2 The SUR doma 100.0 1.4E-36 3E-41 347.5 24.9 214 603-822 17-243 (257)
327 TIGR03740 galliderm_ABC gallid 100.0 9.5E-37 2.1E-41 341.8 22.4 204 1223-1441 1-210 (223)
328 cd03244 ABCC_MRP_domain2 Domai 100.0 1.5E-36 3.2E-41 340.0 23.5 206 605-816 2-220 (221)
329 COG0444 DppD ABC-type dipeptid 100.0 2.2E-36 4.8E-41 337.0 24.5 224 1223-1454 2-253 (316)
330 cd03251 ABCC_MsbA MsbA is an e 100.0 1.6E-36 3.4E-41 342.8 23.7 211 607-823 2-226 (234)
331 cd03230 ABC_DR_subfamily_A Thi 100.0 1.1E-36 2.5E-41 327.0 21.0 170 1223-1433 1-173 (173)
332 cd03217 ABC_FeS_Assembly ABC-t 100.0 1.5E-36 3.3E-41 333.8 22.4 185 1223-1443 1-192 (200)
333 cd03297 ABC_ModC_molybdenum_tr 100.0 1.2E-36 2.5E-41 338.9 21.7 203 1224-1437 3-214 (214)
334 cd03229 ABC_Class3 This class 100.0 1.4E-36 2.9E-41 328.0 21.3 172 1223-1432 1-178 (178)
335 COG1122 CbiO ABC-type cobalt t 100.0 8.3E-37 1.8E-41 337.8 19.6 203 605-823 3-229 (235)
336 COG3638 ABC-type phosphate/pho 100.0 5.6E-37 1.2E-41 323.8 17.0 201 605-821 3-236 (258)
337 COG1124 DppF ABC-type dipeptid 100.0 1.1E-36 2.5E-41 324.6 19.5 207 605-823 3-232 (252)
338 cd03233 ABC_PDR_domain1 The pl 100.0 1.6E-36 3.5E-41 334.0 21.2 190 1222-1437 3-202 (202)
339 PRK09544 znuC high-affinity zi 100.0 3.2E-36 7E-41 342.1 23.8 208 1222-1454 4-217 (251)
340 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3E-36 6.6E-41 341.3 23.4 211 607-822 2-226 (238)
341 cd03253 ABCC_ATM1_transporter 100.0 3.5E-36 7.7E-41 340.4 23.6 209 607-822 2-224 (236)
342 PRK15056 manganese/iron transp 100.0 3.9E-36 8.5E-41 346.5 23.9 209 1222-1444 6-230 (272)
343 TIGR01186 proV glycine betaine 100.0 9.1E-37 2E-41 360.2 18.7 188 625-823 7-220 (363)
344 cd03215 ABC_Carb_Monos_II This 100.0 1.8E-36 4E-41 328.1 19.6 172 1222-1433 4-182 (182)
345 COG4178 ABC-type uncharacteriz 100.0 4E-33 8.6E-38 336.8 50.4 450 338-808 105-588 (604)
346 cd03213 ABCG_EPDR ABCG transpo 100.0 2.1E-36 4.6E-41 330.8 20.1 182 1222-1437 3-194 (194)
347 PRK00349 uvrA excinuclease ABC 100.0 1.9E-35 4.2E-40 381.4 32.2 226 1222-1454 614-937 (943)
348 cd03214 ABC_Iron-Siderophores_ 100.0 2.5E-36 5.5E-41 326.4 19.7 177 1224-1437 1-180 (180)
349 PRK03695 vitamin B12-transport 100.0 4.6E-36 9.9E-41 341.1 22.6 210 1224-1445 2-223 (248)
350 PRK11650 ugpC glycerol-3-phosp 100.0 3.1E-36 6.8E-41 357.1 22.1 202 605-823 3-225 (356)
351 cd03232 ABC_PDR_domain2 The pl 100.0 2.4E-36 5.2E-41 330.0 19.3 181 1222-1437 3-192 (192)
352 CHL00131 ycf16 sulfate ABC tra 100.0 6.4E-36 1.4E-40 341.7 23.7 217 1222-1442 7-239 (252)
353 cd03245 ABCC_bacteriocin_expor 100.0 7.4E-36 1.6E-40 334.1 23.3 205 605-815 2-220 (220)
354 TIGR03608 L_ocin_972_ABC putat 100.0 2.2E-36 4.7E-41 334.9 18.6 197 1225-1428 1-206 (206)
355 cd03223 ABCD_peroxisomal_ALDP 100.0 4.8E-36 1E-40 319.4 20.5 164 1223-1432 1-164 (166)
356 TIGR02770 nickel_nikD nickel i 100.0 5.2E-36 1.1E-40 337.3 21.8 207 1239-1452 1-223 (230)
357 TIGR02314 ABC_MetN D-methionin 100.0 3.1E-36 6.8E-41 354.0 20.5 203 606-822 2-230 (343)
358 PRK13631 cbiO cobalt transport 100.0 6.1E-36 1.3E-40 350.3 22.2 209 602-822 18-265 (320)
359 COG0411 LivG ABC-type branched 100.0 2.4E-36 5.1E-41 322.6 16.6 221 1223-1447 5-242 (250)
360 COG4619 ABC-type uncharacteriz 100.0 1.7E-36 3.8E-41 301.0 14.4 197 1231-1435 10-214 (223)
361 PRK09580 sufC cysteine desulfu 100.0 9.8E-36 2.1E-40 339.4 22.7 215 1223-1442 2-233 (248)
362 COG1123 ATPase components of v 100.0 1.4E-35 3.1E-40 353.7 24.5 228 1222-1454 5-254 (539)
363 TIGR01184 ntrCD nitrate transp 100.0 4.7E-36 1E-40 337.3 19.1 194 1240-1443 1-203 (230)
364 cd03290 ABCC_SUR1_N The SUR do 100.0 1.1E-35 2.3E-40 332.1 21.7 199 607-810 2-218 (218)
365 PRK11432 fbpC ferric transport 100.0 1E-35 2.2E-40 351.7 22.2 201 605-823 6-227 (351)
366 cd03267 ABC_NatA_like Similar 100.0 8.1E-36 1.8E-40 336.7 20.0 195 1237-1437 34-236 (236)
367 COG4175 ProV ABC-type proline/ 100.0 7.8E-36 1.7E-40 324.9 18.9 220 1222-1450 4-260 (386)
368 cd03261 ABC_Org_Solvent_Resist 100.0 1E-35 2.3E-40 336.2 20.0 198 607-822 2-226 (235)
369 COG4615 PvdE ABC-type sideroph 100.0 7.1E-33 1.5E-37 307.9 41.7 507 269-814 3-529 (546)
370 PRK15439 autoinducer 2 ABC tra 100.0 3.9E-35 8.4E-40 367.5 26.6 215 1222-1444 11-229 (510)
371 PRK13549 xylose transporter AT 100.0 2.2E-35 4.8E-40 369.9 24.3 216 1222-1444 5-232 (506)
372 PRK09452 potA putrescine/sperm 100.0 2.2E-35 4.7E-40 351.0 22.3 202 604-823 13-235 (375)
373 cd03216 ABC_Carb_Monos_I This 100.0 4.3E-35 9.4E-40 311.1 21.8 159 1223-1435 1-162 (163)
374 PRK09700 D-allose transporter 100.0 3.3E-35 7.2E-40 368.9 24.5 216 1222-1444 5-234 (510)
375 TIGR03265 PhnT2 putative 2-ami 100.0 1.9E-35 4.1E-40 350.0 20.9 202 605-823 4-225 (353)
376 PRK13538 cytochrome c biogenes 100.0 2.3E-35 5.1E-40 325.7 20.3 194 1223-1428 2-202 (204)
377 PRK10762 D-ribose transporter 100.0 3.8E-35 8.1E-40 367.4 24.3 216 1222-1444 4-230 (501)
378 PRK13643 cbiO cobalt transport 100.0 2.7E-35 5.8E-40 341.7 20.9 205 606-822 2-233 (288)
379 PRK13637 cbiO cobalt transport 100.0 3.3E-35 7.1E-40 340.8 21.4 207 605-822 2-234 (287)
380 PRK13634 cbiO cobalt transport 100.0 2.9E-35 6.3E-40 341.7 20.9 205 606-822 3-235 (290)
381 PRK10851 sulfate/thiosulfate t 100.0 4E-35 8.6E-40 347.3 22.1 201 605-823 2-227 (353)
382 COG2884 FtsE Predicted ATPase 100.0 2E-35 4.4E-40 300.7 16.8 193 606-815 2-219 (223)
383 PRK13650 cbiO cobalt transport 100.0 3E-35 6.6E-40 339.9 20.6 203 605-822 4-229 (279)
384 cd03296 ABC_CysA_sulfate_impor 100.0 5.2E-35 1.1E-39 331.2 21.7 198 606-821 3-225 (239)
385 cd03260 ABC_PstB_phosphate_tra 100.0 2.8E-35 6E-40 331.0 19.1 196 607-819 2-226 (227)
386 PRK13646 cbiO cobalt transport 100.0 4.1E-35 8.9E-40 340.0 21.0 206 605-822 2-235 (286)
387 TIGR03258 PhnT 2-aminoethylpho 100.0 3.5E-35 7.7E-40 348.0 20.7 202 604-823 4-229 (362)
388 cd03369 ABCC_NFT1 Domain 2 of 100.0 8.9E-35 1.9E-39 322.1 22.6 189 604-816 5-206 (207)
389 cd03231 ABC_CcmA_heme_exporter 100.0 7.5E-35 1.6E-39 320.8 21.8 194 1223-1428 1-198 (201)
390 PRK11000 maltose/maltodextrin 100.0 4.2E-35 9.1E-40 349.9 21.2 200 605-822 3-223 (369)
391 COG1245 Predicted ATPase, RNas 100.0 2.9E-34 6.3E-39 324.6 26.1 176 1246-1443 363-546 (591)
392 cd03259 ABC_Carb_Solutes_like 100.0 3.7E-35 8E-40 326.7 18.7 191 607-815 2-213 (213)
393 PRK13647 cbiO cobalt transport 100.0 4.6E-35 9.9E-40 337.5 20.1 199 605-820 4-225 (274)
394 cd03248 ABCC_TAP TAP, the Tran 100.0 8.3E-35 1.8E-39 326.9 21.7 205 602-811 8-226 (226)
395 PRK14269 phosphate ABC transpo 100.0 6.6E-35 1.4E-39 331.8 21.0 203 605-822 2-230 (246)
396 PRK13651 cobalt transporter AT 100.0 6.3E-35 1.4E-39 339.9 21.3 206 605-822 2-254 (305)
397 PRK11288 araG L-arabinose tran 100.0 9.4E-35 2E-39 363.8 24.2 211 1222-1439 4-224 (501)
398 PRK10261 glutathione transport 100.0 1.2E-34 2.6E-39 369.9 25.5 221 1222-1447 12-261 (623)
399 cd03219 ABC_Mj1267_LivG_branch 100.0 4.7E-35 1E-39 331.3 19.1 197 607-821 2-231 (236)
400 PRK10982 galactose/methyl gala 100.0 7.9E-35 1.7E-39 363.9 23.0 212 1225-1443 1-222 (491)
401 PRK14250 phosphate ABC transpo 100.0 1.3E-34 2.8E-39 328.2 22.2 201 605-822 3-221 (241)
402 PRK13540 cytochrome c biogenes 100.0 8.4E-35 1.8E-39 320.2 19.9 193 1223-1427 2-198 (200)
403 cd03265 ABC_DrrA DrrA is the A 100.0 6.3E-35 1.4E-39 326.4 19.0 197 606-820 1-219 (220)
404 PRK11607 potG putrescine trans 100.0 1.1E-34 2.3E-39 345.7 22.1 204 603-823 17-240 (377)
405 PRK14242 phosphate transporter 100.0 1E-34 2.2E-39 331.8 21.1 204 604-822 5-237 (253)
406 TIGR00630 uvra excinuclease AB 100.0 1E-33 2.2E-38 364.9 32.6 214 1222-1442 612-923 (924)
407 TIGR01257 rim_protein retinal- 100.0 1.1E-34 2.3E-39 392.9 24.8 219 1221-1445 927-1150(2272)
408 PRK00635 excinuclease ABC subu 100.0 6.6E-34 1.4E-38 379.5 31.9 211 1222-1445 600-907 (1809)
409 COG4608 AppF ABC-type oligopep 100.0 7.8E-35 1.7E-39 318.3 18.9 196 1222-1454 4-209 (268)
410 COG4559 ABC-type hemin transpo 100.0 1E-34 2.2E-39 300.0 18.6 213 1223-1446 2-232 (259)
411 cd03226 ABC_cobalt_CbiO_domain 100.0 7E-35 1.5E-39 322.4 18.7 188 608-812 2-205 (205)
412 cd03293 ABC_NrtD_SsuB_transpor 100.0 7.9E-35 1.7E-39 325.6 19.3 197 607-817 2-218 (220)
413 TIGR00960 3a0501s02 Type II (G 100.0 4.7E-35 1E-39 326.6 17.4 190 606-811 2-216 (216)
414 TIGR02315 ABC_phnC phosphonate 100.0 1.1E-34 2.5E-39 329.6 20.6 198 606-820 2-233 (243)
415 PRK13543 cytochrome c biogenes 100.0 1.5E-34 3.2E-39 321.6 21.0 195 1222-1430 11-212 (214)
416 PRK13635 cbiO cobalt transport 100.0 1.8E-34 3.8E-39 333.3 22.3 202 605-822 5-229 (279)
417 COG4598 HisP ABC-type histidin 100.0 3.9E-35 8.4E-40 293.9 14.5 219 1222-1448 6-245 (256)
418 PRK14273 phosphate ABC transpo 100.0 1.7E-34 3.7E-39 330.1 21.9 204 604-822 6-238 (254)
419 TIGR00972 3a0107s01c2 phosphat 100.0 1.2E-34 2.6E-39 330.0 20.5 201 606-821 2-231 (247)
420 PRK11153 metN DL-methionine tr 100.0 1.2E-34 2.6E-39 343.3 21.3 204 606-823 2-231 (343)
421 PRK15134 microcin C ABC transp 100.0 4.4E-34 9.6E-39 360.1 27.6 221 1222-1447 5-249 (529)
422 PRK13537 nodulation ABC transp 100.0 1.3E-34 2.9E-39 337.9 21.2 202 604-823 6-228 (306)
423 PRK10938 putative molybdenum t 100.0 1.5E-34 3.3E-39 361.4 23.2 211 1223-1445 4-225 (490)
424 cd03294 ABC_Pro_Gly_Bertaine T 100.0 9.7E-35 2.1E-39 334.1 19.4 186 625-822 38-250 (269)
425 PRK13644 cbiO cobalt transport 100.0 1.6E-34 3.5E-39 333.0 21.0 200 606-822 2-224 (274)
426 cd03268 ABC_BcrA_bacitracin_re 100.0 1.6E-34 3.5E-39 320.3 20.1 191 607-815 2-208 (208)
427 PRK10535 macrolide transporter 100.0 2.1E-34 4.6E-39 368.8 23.9 217 1222-1443 4-231 (648)
428 cd03256 ABC_PhnC_transporter A 100.0 1.5E-34 3.3E-39 328.2 20.1 197 607-820 2-232 (241)
429 TIGR02633 xylG D-xylose ABC tr 100.0 2.5E-34 5.5E-39 360.4 24.1 214 1223-1443 2-229 (500)
430 PRK13546 teichoic acids export 100.0 4.9E-34 1.1E-38 325.9 24.2 214 1222-1453 4-241 (264)
431 cd03263 ABC_subfamily_A The AB 100.0 1.6E-34 3.5E-39 323.3 19.7 197 607-820 2-219 (220)
432 PRK10744 pstB phosphate transp 100.0 2.9E-34 6.2E-39 329.1 22.1 206 602-822 10-244 (260)
433 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.2E-34 2.5E-39 324.0 18.4 191 607-811 2-218 (218)
434 PRK11629 lolD lipoprotein tran 100.0 2.2E-34 4.8E-39 324.8 20.7 198 605-816 5-228 (233)
435 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.3E-34 5.1E-39 325.3 20.9 199 606-822 2-221 (236)
436 cd03224 ABC_TM1139_LivF_branch 100.0 2.1E-34 4.6E-39 322.8 19.9 198 607-821 2-220 (222)
437 cd03258 ABC_MetN_methionine_tr 100.0 2.4E-34 5.1E-39 324.8 20.4 202 606-821 2-229 (233)
438 PRK11247 ssuB aliphatic sulfon 100.0 3.4E-34 7.4E-39 326.1 21.7 197 604-818 11-219 (257)
439 cd03235 ABC_Metallic_Cations A 100.0 1.7E-34 3.7E-39 321.4 18.7 188 608-814 2-212 (213)
440 cd03301 ABC_MalK_N The N-termi 100.0 1.7E-34 3.7E-39 321.4 18.5 191 607-815 2-213 (213)
441 TIGR02324 CP_lyasePhnL phospho 100.0 2.8E-34 6.1E-39 322.2 20.4 201 1223-1428 2-222 (224)
442 TIGR01288 nodI ATP-binding ABC 100.0 3.2E-34 7E-39 335.3 21.3 202 604-823 3-225 (303)
443 PRK09536 btuD corrinoid ABC tr 100.0 2.8E-34 6E-39 343.1 21.1 200 605-822 3-228 (402)
444 PRK14237 phosphate transporter 100.0 4.3E-34 9.4E-39 328.6 21.9 207 601-822 16-251 (267)
445 PRK14235 phosphate transporter 100.0 4.1E-34 8.9E-39 328.8 21.7 204 603-821 17-250 (267)
446 PRK13539 cytochrome c biogenes 100.0 3.5E-34 7.6E-39 316.9 20.3 193 1223-1430 3-200 (207)
447 cd03264 ABC_drug_resistance_li 100.0 1.9E-34 4.2E-39 320.4 18.3 190 606-815 1-211 (211)
448 PRK13633 cobalt transporter AT 100.0 4.9E-34 1.1E-38 330.2 22.2 206 605-822 4-233 (280)
449 cd03218 ABC_YhbG The ABC trans 100.0 2.8E-34 6.1E-39 324.1 19.6 197 607-821 2-221 (232)
450 cd03247 ABCC_cytochrome_bd The 100.0 3.6E-34 7.9E-39 309.2 19.5 166 606-815 1-178 (178)
451 PRK13636 cbiO cobalt transport 100.0 4.2E-34 9.2E-39 331.1 21.4 201 605-822 5-231 (283)
452 PRK13640 cbiO cobalt transport 100.0 4E-34 8.6E-39 331.1 21.2 203 604-822 4-232 (282)
453 cd03266 ABC_NatA_sodium_export 100.0 3E-34 6.4E-39 320.7 19.4 196 606-815 2-218 (218)
454 PRK13641 cbiO cobalt transport 100.0 4E-34 8.7E-39 331.9 21.0 206 605-822 2-234 (287)
455 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.7E-34 7.9E-39 325.0 20.1 200 607-821 2-224 (242)
456 PRK14245 phosphate ABC transpo 100.0 3.7E-34 8E-39 326.6 20.2 203 605-822 3-234 (250)
457 PRK14274 phosphate ABC transpo 100.0 5.9E-34 1.3E-38 326.5 22.0 204 604-822 11-243 (259)
458 PLN03211 ABC transporter G-25; 100.0 4.1E-34 8.8E-39 363.9 22.8 199 1237-1444 81-296 (659)
459 PRK13632 cbiO cobalt transport 100.0 6.1E-34 1.3E-38 328.1 22.1 203 604-822 6-231 (271)
460 PRK13536 nodulation factor exp 100.0 3.8E-34 8.1E-39 337.3 20.7 203 603-823 39-262 (340)
461 PRK11831 putative ABC transpor 100.0 6.1E-34 1.3E-38 327.7 22.0 201 604-822 6-233 (269)
462 PRK13545 tagH teichoic acids e 100.0 1.5E-33 3.2E-38 337.9 25.9 214 1222-1454 21-241 (549)
463 TIGR01189 ccmA heme ABC export 100.0 3.2E-34 7E-39 315.2 18.6 192 1223-1427 1-197 (198)
464 PRK14259 phosphate ABC transpo 100.0 7.4E-34 1.6E-38 326.8 22.4 205 603-822 11-253 (269)
465 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.5E-34 9.7E-39 317.5 19.8 190 606-815 1-211 (211)
466 PRK14248 phosphate ABC transpo 100.0 6.4E-34 1.4E-38 327.7 21.6 205 603-822 19-252 (268)
467 TIGR03415 ABC_choXWV_ATP choli 100.0 3E-34 6.5E-39 340.0 19.0 188 625-823 38-255 (382)
468 PRK14251 phosphate ABC transpo 100.0 4.8E-34 1E-38 325.9 20.0 202 605-821 4-234 (251)
469 cd03269 ABC_putative_ATPase Th 100.0 3.9E-34 8.4E-39 317.8 18.6 191 607-815 2-210 (210)
470 PRK09493 glnQ glutamine ABC tr 100.0 6E-34 1.3E-38 322.9 20.5 199 606-822 2-225 (240)
471 TIGR02211 LolD_lipo_ex lipopro 100.0 4.8E-34 1E-38 319.7 19.4 193 606-812 2-220 (221)
472 PRK14249 phosphate ABC transpo 100.0 7.7E-34 1.7E-38 324.1 21.4 203 605-822 4-235 (251)
473 PRK14268 phosphate ABC transpo 100.0 5.8E-34 1.3E-38 326.2 20.5 203 604-821 11-241 (258)
474 COG0410 LivF ABC-type branched 100.0 5.2E-34 1.1E-38 302.4 18.5 206 606-823 4-227 (237)
475 PRK14270 phosphate ABC transpo 100.0 6.7E-34 1.5E-38 324.6 20.8 203 605-822 4-235 (251)
476 KOG0060 Long-chain acyl-CoA tr 100.0 1.6E-31 3.4E-36 311.6 40.6 336 1082-1431 269-642 (659)
477 COG4181 Predicted ABC-type tra 100.0 4.8E-34 1E-38 284.6 16.8 209 1222-1436 6-227 (228)
478 PRK13649 cbiO cobalt transport 100.0 6.1E-34 1.3E-38 330.0 20.5 206 605-822 2-234 (280)
479 PRK14239 phosphate transporter 100.0 7.2E-34 1.6E-38 324.8 20.8 203 605-822 5-236 (252)
480 PRK13645 cbiO cobalt transport 100.0 6.6E-34 1.4E-38 330.9 20.8 207 604-822 5-240 (289)
481 PRK10247 putative ABC transpor 100.0 6.5E-34 1.4E-38 319.0 20.0 198 604-818 6-223 (225)
482 TIGR03411 urea_trans_UrtD urea 100.0 7.6E-34 1.6E-38 322.6 20.7 197 606-821 3-230 (242)
483 TIGR03269 met_CoM_red_A2 methy 100.0 4.7E-34 1E-38 359.4 20.8 215 1223-1444 1-258 (520)
484 TIGR03771 anch_rpt_ABC anchore 100.0 5.4E-34 1.2E-38 319.0 19.0 193 1245-1454 1-209 (223)
485 PRK13652 cbiO cobalt transport 100.0 1E-33 2.2E-38 327.1 21.8 201 605-822 3-227 (277)
486 PRK10575 iron-hydroxamate tran 100.0 1E-33 2.2E-38 325.4 21.7 201 603-821 9-236 (265)
487 TIGR01188 drrA daunorubicin re 100.0 4.4E-34 9.5E-39 334.1 18.9 187 625-823 7-214 (302)
488 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 8.1E-34 1.8E-38 317.7 20.1 197 1223-1437 23-224 (224)
489 TIGR03410 urea_trans_UrtE urea 100.0 7E-34 1.5E-38 320.3 19.7 197 607-820 2-219 (230)
490 PRK14240 phosphate transporter 100.0 1.1E-33 2.5E-38 322.6 21.6 202 605-821 3-233 (250)
491 PRK14243 phosphate transporter 100.0 1.5E-33 3.3E-38 323.5 22.7 204 604-822 9-248 (264)
492 PRK13642 cbiO cobalt transport 100.0 9.7E-34 2.1E-38 327.3 21.1 203 605-822 4-229 (277)
493 TIGR01166 cbiO cobalt transpor 100.0 4.6E-34 1E-38 311.9 17.4 177 1237-1418 5-189 (190)
494 PRK10619 histidine/lysine/argi 100.0 8.9E-34 1.9E-38 324.7 20.6 201 604-821 4-240 (257)
495 PRK10584 putative ABC transpor 100.0 1.1E-33 2.5E-38 318.2 21.1 196 605-814 6-227 (228)
496 cd03223 ABCD_peroxisomal_ALDP 100.0 8.4E-34 1.8E-38 302.2 18.9 161 606-809 1-163 (166)
497 PRK10070 glycine betaine trans 100.0 5.2E-34 1.1E-38 340.6 19.2 187 626-823 43-255 (400)
498 KOG0066 eIF2-interacting prote 100.0 3.2E-34 6.9E-39 319.5 16.1 197 1222-1441 586-788 (807)
499 PRK13648 cbiO cobalt transport 100.0 1.2E-33 2.6E-38 325.5 21.2 203 604-822 6-231 (269)
500 PRK14247 phosphate ABC transpo 100.0 1.2E-33 2.7E-38 322.4 21.2 202 605-821 3-233 (250)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-257 Score=2444.27 Aligned_cols=1237 Identities=42% Similarity=0.704 Sum_probs=1137.4
Q ss_pred CCCCCCCCh--hHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCcchHHHHHHHHhH
Q 000503 202 TDSGNNQSY--WDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGY 279 (1459)
Q Consensus 202 ~~~e~~~~~--~s~~~f~Wl~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~ 279 (1459)
++|.+.++. +|+++|||++|++++|||++|+.+|+|+++++++++.+.++|++.|+++.++++++|+++++++++|+|
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~~~psl~~al~~~f~~ 201 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSGKKPSLLRALLRTFGR 201 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhccccCCcHHHHHHHHHHHH
Confidence 345555555 999999999999999999999999999999999999999999999999874434578999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 280 PYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQG-SGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTII 358 (1459)
Q Consensus 280 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~-~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~i 358 (1459)
+++..++++++.+...|++|.+++.++++++++ .+.+.||+++++++++.++++++.++|+|...++|+++|+++.++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~I 281 (1381)
T KOG0054|consen 202 TFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAI 281 (1381)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHH
Confidence 999999999999999999999999999999884 5678899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000503 359 YQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWI 438 (1459)
Q Consensus 359 y~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~~~~~~~~~~ 438 (1459)
|+|+|+++...+++.+.|+++|+|++|++|+.++..++|.+|.+|+|+++++++||.++|+++++|++++++++|+|.++
T Consensus 282 Y~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~ 361 (1381)
T KOG0054|consen 282 YRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFL 361 (1381)
T ss_pred HHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999989999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 439 ANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLF 518 (1459)
Q Consensus 439 ~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1459)
+++++++|++.|+.+|+|+++|+|+|+|||+|||||||+.|.++|++.|++|++.++|..++.+++.+++.+.|++++++
T Consensus 362 a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~ 441 (1381)
T KOG0054|consen 362 AKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVV 441 (1381)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCc
Q 000503 519 TFGLFA-LMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLS 597 (1459)
Q Consensus 519 ~f~~~~-~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~ 597 (1459)
+|++|+ ..++.++++++|+++++|++++.|+.++|..+..++++.+|++|+++||..+|.++..... .+.
T Consensus 442 tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~--~~~------- 512 (1381)
T KOG0054|consen 442 TFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVER--SPD------- 512 (1381)
T ss_pred HHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcccccc--CCC-------
Confidence 999999 7788999999999999999999999999999999999999999999999998876632110 011
Q ss_pred ccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcCcEEEE
Q 000503 598 NFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYV 677 (1459)
Q Consensus 598 ~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~ 677 (1459)
...+.+++++|++|+|+++++++ .|+||||+|++|+++||||++||||||||++|+||+++.+|+|.++|.+|||
T Consensus 513 --~~~~~~i~i~~~sfsW~~~~~~~---tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv 587 (1381)
T KOG0054|consen 513 --EAGENAIEIKNGSFSWDSESPEP---TLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYV 587 (1381)
T ss_pred --CCCCceEEEeeeeEecCCCCCcc---cccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEe
Confidence 23456799999999999754434 4999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEE
Q 000503 678 PQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYML 757 (1459)
Q Consensus 678 ~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illl 757 (1459)
||+|||+||||||||+||.+||++||++|+++|+|++|++.+|+||+|+|||+|.||||||||||+||||+|+++|||||
T Consensus 588 ~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLL 667 (1381)
T KOG0054|consen 588 PQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLL 667 (1381)
T ss_pred ccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhccccCcccccccchh
Q 000503 758 DDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTS 837 (1459)
Q Consensus 758 De~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 837 (1459)
|||+||||+||++|||++|+.| .+++||+|+|||+++++++||+|++|+||+|.++|+|+|+++.+..+.++..+.+.+
T Consensus 668 DDplSAVDahvg~~if~~ci~~-~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~ 746 (1381)
T KOG0054|consen 668 DDPLSAVDAHVGKHIFEECIRG-LLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESE 746 (1381)
T ss_pred cCcchhhhHhhhHHHHHHHHHh-hhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchh
Confidence 9999999999999999999977 889999999999999999999999999999999999999997666555432111111
Q ss_pred hhhh--hhhhccccc---c---hhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHHHHhh-hhHHHHHHHHHHH
Q 000503 838 LHMQ--KQEMRTNAS---S---ANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKF-SGWFITLVICLSA 908 (1459)
Q Consensus 838 ~~~~--~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~-~g~~~~~~~~~~~ 908 (1459)
.... ....+.... . ..+.....+++.....++..+..++|+++.|.+++++|+.|+++ .|+....+++++.
T Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~ 826 (1381)
T KOG0054|consen 747 QEEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLF 826 (1381)
T ss_pred hccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHH
Confidence 0000 000000000 0 00000000111111112234566778889999999999999998 5677777777888
Q ss_pred HHHHHHHhhhhhhhhhhccccCCCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Q 000503 909 ILMQASRNGNDLWLSYWVDTTGSSQTK-YSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPV 987 (1459)
Q Consensus 909 ~~~~~~~~~~~~wl~~w~~~~~~~~~~-~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~ 987 (1459)
++.+++..+.++||++|++........ .+..+|+++|++++++..++.+++++.+...+.++++++|++|+++++|+||
T Consensus 827 v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm 906 (1381)
T KOG0054|consen 827 VLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPM 906 (1381)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 999999999999999999875432221 4678999999999999999999999999999999999999999999999999
Q ss_pred ccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 988 LFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELR 1067 (1459)
Q Consensus 988 ~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~l~ 1067 (1459)
+|||+||+|||+||||+|++.+|..+|..+..++.+++.++++++++++..|+++++++|+.++|++++++|++++||++
T Consensus 907 ~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLk 986 (1381)
T KOG0054|consen 907 SFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELK 986 (1381)
T ss_pred hhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000503 1068 RLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIG 1147 (1459)
Q Consensus 1068 ~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~ 1147 (1459)
|+++.+|||+|+||+|+++|+.|||||+.|++|.+++.+++|.+++++|...+.+||+++|+|+++++++.++++++++.
T Consensus 987 RLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~ 1066 (1381)
T KOG0054|consen 987 RLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLL 1066 (1381)
T ss_pred HhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888764
Q ss_pred hcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc--cccCCCCCCCCCCCccEEE
Q 000503 1148 SRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE--LCGYQSLSPDWPFQGLIEF 1225 (1459)
Q Consensus 1148 ~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~--~~~~~~~~~~wp~~g~I~f 1225 (1459)
... ..++|.+|++++|++++++.++|++++.+++|+.|+|+||+.||.++|+|+ ......||++||.+|+|+|
T Consensus 1067 ~~~-----~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f 1141 (1381)
T KOG0054|consen 1067 PSG-----LISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEF 1141 (1381)
T ss_pred cCC-----CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEE
Confidence 321 145999999999999999999999999999999999999999999998883 1222337889999999999
Q ss_pred EEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000503 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1459)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1459)
+|++++|+|+.|+|||||||+|+||||||||||||||||||+++|+|+.||.+|+|.|||+||+++++++||+++++|||
T Consensus 1142 ~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQ 1221 (1381)
T KOG0054|consen 1142 EDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQ 1221 (1381)
T ss_pred EEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000503 1306 SPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1383 (1459)
Q Consensus 1306 dp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDE 1383 (1459)
||+||+||+|+||||+++++|++||+||++|+|++.++++ |||+.|.|+|.|||.||||++||||||||++|||+|||
T Consensus 1222 dPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDE 1301 (1381)
T KOG0054|consen 1222 DPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDE 1301 (1381)
T ss_pred CCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEec
Confidence 9999999999999999999999999999999999999988 99999999999999999999999999999999999999
Q ss_pred cCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000503 1384 CTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1458 (1459)
Q Consensus 1384 aTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1458 (1459)
|||++|++||..||++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|++|+++++|.|++++.+.+
T Consensus 1302 ATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~ 1376 (1381)
T KOG0054|consen 1302 ATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAA 1376 (1381)
T ss_pred ccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998887653
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.2e-209 Score=2120.58 Aligned_cols=1428 Identities=31% Similarity=0.526 Sum_probs=1181.3
Q ss_pred CccCCCCcc-ccccc------cccchhhhHHHHHHhhhHHHH-HHhhhc-ccc-cCCCccchhhHHHHHHHHHHHHHHHH
Q 000503 2 DFICPNSPF-VWDGS------TFSKCFDDMILDFATNMVTIF-IILIIG-ITQ-RSPRQNQRINLMEKVFLHILPLVGAC 71 (1459)
Q Consensus 2 ~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~~k~~~~~~~~~~~~ 71 (1459)
+-+|+.... +|.+. .+.+||++..+..+++..... ..+.+- .++ .+...+..+..+.|+.+.++++..++
T Consensus 7 ~~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1622)
T PLN03130 7 DWYCRPVPNGVWAKKVDNAFGAYTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQRFCLRSKWYNYFLALLAAYCTA 86 (1622)
T ss_pred hhhcCCCccCCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHhccccccCCccccchHHHHHHHHHHHHHHH
Confidence 347964322 35553 466999995444444433332 111111 111 12222233366666666555544333
Q ss_pred HHHHHHHHH---HHHhcc-CccccchH-HHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHH---HHHHHHHHhH
Q 000503 72 LSSVDVILL---LKEKLH-GEFVSYHE-WLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIK---PVMGILHQLV 143 (1459)
Q Consensus 72 ~~~~~~~~~---~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~l~~~~~~~---~~~~~~~~rt 143 (1459)
..++..... ..+... +.+..+.. +++.++..++++++.++.+.||.|+.+++..+.+||++. +++.++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 163 (1622)
T PLN03130 87 EPLFRLVMGISVLNLDGQTSLPPFEIVSLIVEALTWCSMLVMIGVETKIYIREFRWYVRFAVIYVLVGDAVMLNLVL--- 163 (1622)
T ss_pred HHHHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeehhHHHhhHHHHHHHHH---
Confidence 333221111 111110 11122333 666788888888888889999999999999999999998 7777662
Q ss_pred Hhhhhhhhh---hhhHHHHHHHHHHHHHHH-HHHHhhcccCccccc---ccccccCCC-CCCCCCCCCCCCCCChhHHHH
Q 000503 144 TFSSFEVLK---CLKEICLVLLDIMFGISI-NIIRVKRASSRRSSI---EESLLSVDG-DVEEDCNTDSGNNQSYWDLMA 215 (1459)
Q Consensus 144 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~e~~~~~~s~~~ 215 (1459)
...+.... .. ....+++.+++.++. ++.+..++.+ .+. .+...+.++ ......+.+||+++|+|||++
T Consensus 164 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~ 239 (1622)
T PLN03130 164 -SVKEYYSSFVLYL-YISEVAAQVLFGILLLVYFPNLDPYP--GYTPIGSESVDDYEYEELPGGEQICPERHANIFSRIF 239 (1622)
T ss_pred -HHHHHHhccccce-ehhHHHHHHHHHHHHHHHHhcCCCCc--ccccccccccccccccCCcccCCCCcccccCHHHHHH
Confidence 11111111 11 122232333333332 2222222211 110 000000000 001234678999999999999
Q ss_pred HHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCcchHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000503 216 FKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIG 295 (1459)
Q Consensus 216 f~Wl~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~ 295 (1459)
|||++|++++|||++|+.+|||+++++++++.+.++|++.|+++. + +++++|+++++++|++.++..++++++..++.
T Consensus 240 F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~ 317 (1622)
T PLN03130 240 FGWMTPLMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEEL-K-KPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQ 317 (1622)
T ss_pred HHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHh-c-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999875 2 35689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCh
Q 000503 296 FAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSD 375 (1459)
Q Consensus 296 ~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~ 375 (1459)
+++|++++.+++++.++...+.++++++++++..++.+++.++|.+...+++.++|+.+...+|+|+++++...+++.++
T Consensus 318 ~~~P~ll~~li~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~ 397 (1622)
T PLN03130 318 FVGPLLLNLLLESMQNGEPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTS 397 (1622)
T ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCH
Confidence 99999999999999764444567777777777777777777888888899999999999999999999999998888899
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 376 GEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDE 455 (1459)
Q Consensus 376 g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 455 (1459)
|+++|+|++|++++.+....+|.+|..|+++++++++||..+|+++++|++++++++|++.++++++++.++++++.+|+
T Consensus 398 G~ivnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~ 477 (1622)
T PLN03130 398 GKITNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDK 477 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHH
Q 000503 456 RIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMV 535 (1459)
Q Consensus 456 R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ 535 (1459)
|.+.++|+++|||+||+||||+.+.+++++.|++|++..++..+..++..+++...|.++++++|++|.+.++.+|++.+
T Consensus 478 r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~v 557 (1622)
T PLN03130 478 RIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARA 557 (1622)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999988888888888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCcccCCCCceEEEEcceEec
Q 000503 536 FTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSW 615 (1459)
Q Consensus 536 ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w 615 (1459)
|+++++++.+..|+..+|..+..+.++++|++||++||..+|..+... .+. ......|+++|++|+|
T Consensus 558 f~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~----~~~---------~~~~~~I~~~nvsf~y 624 (1622)
T PLN03130 558 FTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPN----PPL---------EPGLPAISIKNGYFSW 624 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC----Ccc---------cCCCCceEEEeeEEEc
Confidence 999999999999999999999999999999999999998765422100 000 0112469999999999
Q ss_pred cCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC-eEEEEcCcEEEEcCCCCCCCCCHHHHhcc
Q 000503 616 YCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH-GSIHASGSIAYVPQVPWILSGTIRDNILF 694 (1459)
Q Consensus 616 ~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~-G~i~~~~~i~y~~Q~~~l~~~ti~~nI~~ 694 (1459)
+++++ +++|+|+||++++|++++|+||+|||||||+++|+|+++|++ |+|.++++||||+|+|||||+||||||+|
T Consensus 625 ~~~~~---~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~f 701 (1622)
T PLN03130 625 DSKAE---RPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILF 701 (1622)
T ss_pred cCCCC---CceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhC
Confidence 75422 345999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHH
Q 000503 695 GKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILS 774 (1459)
Q Consensus 695 g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~ 774 (1459)
|+++|+++|++++++|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++|++
T Consensus 702 g~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~ 781 (1622)
T PLN03130 702 GSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFD 781 (1622)
T ss_pred CCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhhh--hhccc-ccc
Q 000503 775 NAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQ--EMRTN-ASS 851 (1459)
Q Consensus 775 ~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~ 851 (1459)
+|+.+ .++++|+|+|||+++.++.||+|++|++|+|+++|+++|+.+..+.+..+..+.....+.... +.... ...
T Consensus 782 ~~l~~-~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 860 (1622)
T PLN03130 782 KCIKD-ELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEEDDQTSS 860 (1622)
T ss_pred HHhhH-HhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhccccccccccccccccccccc
Confidence 98766 567899999999999999999999999999999999999987654443322111000000000 00000 000
Q ss_pred hhh-h---hhhhcccc--cCCCcchhhhhHHHHHhcccchHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 000503 852 ANK-Q---ILLQEKDV--VSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG-WFITLVICLSAILMQASRNGNDLWLSY 924 (1459)
Q Consensus 852 ~~~-~---~~~~~~~~--~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~wl~~ 924 (1459)
... . ........ .+..+......++|+++.|.+++++|++|+++.| ++..++++++.++.++...++++|+++
T Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 940 (1622)
T PLN03130 861 KPVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSE 940 (1622)
T ss_pred ccccccccccccccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 00000000 0000011223456778899999999999999865 334444455666778888899999999
Q ss_pred hccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhh
Q 000503 925 WVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSS 1004 (1459)
Q Consensus 925 w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~ 1004 (1459)
|++.... ......+|+++|++++++..++.+++.+++...+.+++.++|++++++++++|++||+++|+|+|+|||++
T Consensus 941 w~~~~~~--~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~ 1018 (1622)
T PLN03130 941 WTDQGTP--KTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAK 1018 (1622)
T ss_pred HHhcccc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHH
Confidence 9975321 12234568889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhh
Q 000503 1005 DLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTET 1084 (1459)
Q Consensus 1005 D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~ 1084 (1459)
|++.+|..++..+..++..++.+++.++++++..|+.+++++|+.++++.++++|.+++|++++++.++++|+++|+.|+
T Consensus 1019 Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Et 1098 (1622)
T PLN03130 1019 DLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEA 1098 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 99999999999999999999999988888888888888888898888888899999999999999999999999999999
Q ss_pred hccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHH
Q 000503 1085 LNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGL 1164 (1459)
Q Consensus 1085 l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl 1164 (1459)
++|+.|||+|+++++|.+++.+..+.+++..+.....++|++.++++++++++.+.+.+.+... +........++.+|+
T Consensus 1099 l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~-~~~~~~~~~~~~~G~ 1177 (1622)
T PLN03130 1099 LNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQN-GRAENQAAFASTMGL 1177 (1622)
T ss_pred hCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cccccchhhhHHHHH
Confidence 9999999999999999999999999999999999999999999999888766655544444321 110011123678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccc--cCCCCCCCCCCCccEEEEEEEEEecCCCCcccee
Q 000503 1165 ALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHD 1242 (1459)
Q Consensus 1165 ~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~--~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~ 1242 (1459)
+++|++.+...++++.+.+.++|+.++|++|+.+|.+.|+|+.. +...+++.||.+|.|+|+||+|+|+++.++||+|
T Consensus 1178 ~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~ 1257 (1622)
T PLN03130 1178 LLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHG 1257 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecc
Confidence 99999999999999999999999999999999999998887532 2234556799999999999999998877789999
Q ss_pred eeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCC
Q 000503 1243 INFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH 1322 (1459)
Q Consensus 1243 isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~ 1322 (1459)
+||+|+||||||||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||+||+|||||||||++
T Consensus 1258 is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~ 1337 (1622)
T PLN03130 1258 LSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN 1337 (1622)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHH
Q 000503 1323 MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAI 1400 (1459)
Q Consensus 1323 ~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I 1400 (1459)
+++|+|+|+|+++|+++++++++ ||||.++|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|
T Consensus 1338 ~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I 1417 (1622)
T PLN03130 1338 EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTI 1417 (1622)
T ss_pred CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000503 1401 SSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1458 (1459)
Q Consensus 1401 ~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1458 (1459)
++.+++||+|+||||++|+++||||+|||+|+|+|+|+|+||+++++|.|++|++++|
T Consensus 1418 ~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1418 REEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTG 1475 (1622)
T ss_pred HHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999987889999999887
No 3
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.2e-209 Score=2124.73 Aligned_cols=1407 Identities=31% Similarity=0.516 Sum_probs=1196.2
Q ss_pred ccchhhhHHHHHHhhhHHHH-HHhhhc-ccccCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc-c
Q 000503 17 FSKCFDDMILDFATNMVTIF-IILIIG-ITQRSPR-QNQRINLMEKVFLHILPLVGACLSSVDVILLLKEKLHGEFVS-Y 92 (1459)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 92 (1459)
+.+||.+..+..+++.++.+ ....+- ..++..+ ....+.+..|++...++++ ++++. ++...|..+....+ +
T Consensus 23 ~t~~f~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~ 98 (1522)
T TIGR00957 23 FTKCFQNTVLAWVPCFYLWVCFPCYFLYLSRHDRGYIQMTHLNKTKTALGFLLWI---VCWAD-LFYSFWERSHGRAPAP 98 (1522)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcCCcchHHHHHHHHHHHHHH---HHHHH-HHHHHHhccccccccc
Confidence 55999998887766666555 221111 1122222 4455667778776655433 33322 23333433222222 5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhHHhhhhhhhhh--hh-HHHHHHHHHHHHHH
Q 000503 93 HEWLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIKPVMGILHQLVTFSSFEVLKC--LK-EICLVLLDIMFGIS 169 (1459)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~l~~~~~~~~~~~~~~~rt~~~~~~~~~~--~~-~~~~~~~~~~~~~~ 169 (1459)
.+++++++.++++++++++++.||.|+.|||.++.+||++++++|++++||+|........ .. ....+++.++++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1522)
T TIGR00957 99 VFLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALVCALAILRSKILLALKEDAIVDPFRDTTFYIYFALVLS 178 (1522)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhcccCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccccccceehhhHHHHHHHHHH
Confidence 6788999999999999999999999999999999999999999999999999875321100 00 12333344444544
Q ss_pred HHHHHh-hcccCcccccccccccCCCCCCCCCCCCCCCCCChhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHH
Q 000503 170 INIIRV-KRASSRRSSIEESLLSVDGDVEEDCNTDSGNNQSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTC 248 (1459)
Q Consensus 170 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~s~~~f~Wl~pl~~~g~~~~L~~~dl~~l~~~~~~~~~ 248 (1459)
.++.+. .++++ .+.+.. ...+.+||+++|++||++|||+||++++|||++|+.+|||+++++++++.+
T Consensus 179 ~~~~~~~~~~~~--------~~~~~~---~~~~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~ 247 (1522)
T TIGR00957 179 QLVLSCFSDKSP--------LFSETN---HDPNPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLNKEDTSEMV 247 (1522)
T ss_pred HHHHHhhcCCCC--------cccccc---ccCCCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCCHhHhHHHH
Confidence 433332 22222 111100 112468999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhc---------------------------------------CCCCcchHHHHHHHHhHHHHHHHHHHH
Q 000503 249 HSKLLSCWQAQRSC---------------------------------------NCTNPSLVRAICCAYGYPYICLGLLKV 289 (1459)
Q Consensus 249 ~~~~~~~w~~~~~~---------------------------------------~~~~~~l~~~l~~~~~~~~~~~~~~~l 289 (1459)
.++|++.|+++.++ +.++++|+++++++|++.++..+++++
T Consensus 248 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~l~~~~~~l 327 (1522)
T TIGR00957 248 VPVLVENWKKECKKTRKQPVSAVYGKKDPSKPKGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYFLMSFCFKA 327 (1522)
T ss_pred HHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccCCccHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999875310 113478999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 000503 290 VNDSIGFAGPLLLNKLIKFLQQG-SGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLA 368 (1459)
Q Consensus 290 ~~~~~~~~~P~ll~~li~~~~~~-~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~ 368 (1459)
+.+++.+++|++++.+++++.++ .+.+.||++++++++++++.+++.++|.|...+++.++|++|+..||+|+|+++..
T Consensus 328 ~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~ 407 (1522)
T TIGR00957 328 IHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITNS 407 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChh
Confidence 99999999999999999999763 34456899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 369 ERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEK 448 (1459)
Q Consensus 369 ~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~ 448 (1459)
.+++.++|+++|+|++|++++..+...+|.+|..|++++++++++|.++|+++++|++++++++|++.++++++++.+++
T Consensus 408 ~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 487 (1522)
T TIGR00957 408 ARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTKTYQVA 487 (1522)
T ss_pred hcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Q 000503 449 MMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALM-- 526 (1459)
Q Consensus 449 ~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-- 526 (1459)
+++.+|+|++.++|+++|||+||++|||+.+.+++++.|++|++..++..+...+..+.+...|.++.+++|++|.+.
T Consensus 488 ~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 567 (1522)
T TIGR00957 488 HMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVDE 567 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999888887778888888889999999876
Q ss_pred CCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCcccCCCCceE
Q 000503 527 GHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAV 606 (1459)
Q Consensus 527 ~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 606 (1459)
++.|+++.+|+++++++++..|+..+|..++.+.++++|++||++||+.++.++..... .... ......+
T Consensus 568 ~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~-~~~~---------~~~~~~i 637 (1522)
T TIGR00957 568 NNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIER-RTIK---------PGEGNSI 637 (1522)
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccc-cccC---------CCCCCcE
Confidence 46799999999999999999999999999999999999999999999876543211000 0000 0112369
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcCcEEEEcCCCCCCCC
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSG 686 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~~~l~~~ 686 (1459)
+++|++|+|+.+ + +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+||||+|+||++++
T Consensus 638 ~~~~~~~~~~~~-~---~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~~ 713 (1522)
T TIGR00957 638 TVHNATFTWARD-L---PPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQND 713 (1522)
T ss_pred EEEEeEEEcCCC-C---CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECCEEEEEcCCccccCC
Confidence 999999999742 1 245999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccH
Q 000503 687 TIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDA 766 (1459)
Q Consensus 687 ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~ 766 (1459)
||||||.||.++|+++|++++++|++.+|++.+|+||+|.+|++|.+|||||||||+||||+|++|+|++||||||+||+
T Consensus 714 Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~ 793 (1522)
T TIGR00957 714 SLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDA 793 (1522)
T ss_pred cHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcC-cccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhccccCcccccccch--hh---hh
Q 000503 767 QVARWILSNAIMG-PHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDT--SL---HM 840 (1459)
Q Consensus 767 ~~~~~i~~~~~~~-~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~--~~---~~ 840 (1459)
++++++++.++.. ...+++|+|+|||+++.++.||+|++|++|+++++|+++++.+..+.+.....+... .. +.
T Consensus 794 ~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 873 (1522)
T TIGR00957 794 HVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLED 873 (1522)
T ss_pred HHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHhhccccccccccc
Confidence 9999999986521 145789999999999999999999999999999999999997654433322110000 00 00
Q ss_pred h------hhhhcc-------cc---cchhh-h------h--hh---h---cc--cccCCCcchhhhhHHHHHhcccchHH
Q 000503 841 Q------KQEMRT-------NA---SSANK-Q------I--LL---Q---EK--DVVSVSDDAQEIIEVEQRKEGRVELT 887 (1459)
Q Consensus 841 ~------~~~~~~-------~~---~~~~~-~------~--~~---~---~~--~~~~~~~~~~~~~~~e~~~~g~v~~~ 887 (1459)
. .+..+. .. ..+.. . . .. . .. +..+..+...+..++|.++.|.++++
T Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~ 953 (1522)
T TIGR00957 874 SWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELS 953 (1522)
T ss_pred cccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHHHHHHhcCcccHH
Confidence 0 000000 00 00000 0 0 00 0 00 00000001123445677888999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 888 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 967 (1459)
Q Consensus 888 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 967 (1459)
+|++|+++.|+...++++++.++.+++..++++|+++|++......+.....+|+++|++++++..++.++..+++.+.+
T Consensus 954 ~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~ 1033 (1522)
T TIGR00957 954 VYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGG 1033 (1522)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988776666677777788889999999999975321112233456788999999999998888888889999
Q ss_pred HHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHH
Q 000503 968 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1047 (1459)
Q Consensus 968 ~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p 1047 (1459)
.++++++|++++++++++|++||+++|+|+++|||++|++.+|+.++..+..++..++.+++.++++++..|+++++++|
T Consensus 1034 ~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~ 1113 (1522)
T TIGR00957 1034 IQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPP 1113 (1522)
T ss_pred HHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988888889999888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1048 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1127 (1459)
Q Consensus 1048 l~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 1127 (1459)
+.++++.++++|.+++|++++++.++++|+++++.|+++|+.|||+||+|++|.+++.+..|.++++.+.....++|+..
T Consensus 1114 ~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1193 (1522)
T TIGR00957 1114 LGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAV 1193 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Q 000503 1128 RLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEEL 1207 (1459)
Q Consensus 1128 ~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~ 1207 (1459)
++++++.+++.+++.+.++. .+..++|.+|++++|+..+..++.++++.++++|+.++|++|+.+|.+.|+|+.
T Consensus 1194 ~~~~~~~~~~~~~~~~~v~~------~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~ 1267 (1522)
T TIGR00957 1194 RLECVGNCIVLFAALFAVIS------RHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAP 1267 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 99998776555544444321 134578999999999999999999999999999999999999999998887753
Q ss_pred c--cCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECC
Q 000503 1208 C--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDG 1285 (1459)
Q Consensus 1208 ~--~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG 1285 (1459)
. +...++++||.+|.|+|+||+|+|+++.++||+|+||+|+||||||||||||||||||+++|+|+++|++|+|.|||
T Consensus 1268 ~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG 1347 (1522)
T TIGR00957 1268 WQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDG 1347 (1522)
T ss_pred ccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECC
Confidence 1 22345567999999999999999987767899999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHH
Q 000503 1286 LNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQR 1363 (1459)
Q Consensus 1286 ~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQr 1363 (1459)
+||++++++++|++|++|||||+||+||||+||||+++++|+|+|+|+++|+++++++++ ||||.++|+|.+||||||
T Consensus 1348 ~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQr 1427 (1522)
T TIGR00957 1348 LNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQR 1427 (1522)
T ss_pred EEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHh
Q 000503 1364 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1364 Qrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
||+||||||||+|+|||||||||+||.+||+.||++|++.+++||||+||||++++++||||+|||+|+|+|+|+|+||+
T Consensus 1428 Qrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl 1507 (1522)
T TIGR00957 1428 QLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLL 1507 (1522)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcHHHHHHHhhCC
Q 000503 1444 QDECSVFSSFVRASTM 1459 (1459)
Q Consensus 1444 ~~~~~~f~~l~~~~g~ 1459 (1459)
++ +|.|++|++++|.
T Consensus 1508 ~~-~~~f~~l~~~~g~ 1522 (1522)
T TIGR00957 1508 QQ-RGIFYSMAKDAGL 1522 (1522)
T ss_pred hC-CCHHHHHHHHcCC
Confidence 97 5899999999884
No 4
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.9e-205 Score=2085.96 Aligned_cols=1429 Identities=30% Similarity=0.517 Sum_probs=1175.4
Q ss_pred cCCCCc-cccccc------cccchhhhHHHHHHhhhHHHH-HHhhhc-c-cccCCCccchhhHHHHHHHHHHHHHHHHHH
Q 000503 4 ICPNSP-FVWDGS------TFSKCFDDMILDFATNMVTIF-IILIIG-I-TQRSPRQNQRINLMEKVFLHILPLVGACLS 73 (1459)
Q Consensus 4 ~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 73 (1459)
+|+... ..|.+. .+.+||++..+...++..... ..+.+- . ..++...+..+..+.|+.+.+++++.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (1495)
T PLN03232 9 YCKPIAEGFWEKTVDGAFGAYTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAKAQIYVLRKKYYNCVLGILACYCVVEP 88 (1495)
T ss_pred hcCCccccCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccccCCccccchHHHHHHHHHHHHHHHHH
Confidence 785322 245543 356999995444444433332 211111 1 012222222236666666655555433333
Q ss_pred HHHHHHH---HHHhcc-CccccchH-HHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHH---HHHHHHHHhHHh
Q 000503 74 SVDVILL---LKEKLH-GEFVSYHE-WLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIK---PVMGILHQLVTF 145 (1459)
Q Consensus 74 ~~~~~~~---~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~l~~~~~~~---~~~~~~~~rt~~ 145 (1459)
....... ..+... .....+.. +++.++..++++++..+.+.||.|+.+++..+.+||++. +++.++. .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 164 (1495)
T PLN03232 89 VLRLVMGISLFDMDEETDLPPFEVASLMVEAFAWFSMLVLIGLETKQYVKEFRWYVRFGVVYVLVADAVLLDLVL----P 164 (1495)
T ss_pred HHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeehhHhhhhHHHHHHHH----H
Confidence 3221110 111111 11122333 666788888888777899999999999999999999999 7777762 1
Q ss_pred hhhhhhh---hhhHHHHHHHHHHHHHHH-HHHHhhcccCcccccccccccC-C-CCCCCCCCCCCCCCCChhHHHHHHhH
Q 000503 146 SSFEVLK---CLKEICLVLLDIMFGISI-NIIRVKRASSRRSSIEESLLSV-D-GDVEEDCNTDSGNNQSYWDLMAFKSI 219 (1459)
Q Consensus 146 ~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~e~~~~~~s~~~f~Wl 219 (1459)
..+.... .. ....++..+.+.+.. +..+..++.+.-.....+...+ . ...+...+++||+++|+|||++|||+
T Consensus 165 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~f~w~ 243 (1495)
T PLN03232 165 LKNSINRTALYL-CISSRCCQALFGILLLVYIPELDPYPGYHILNNESLDNVEYDALRGGENICPERYASIFSRIYFSWM 243 (1495)
T ss_pred HHHHHhccccce-ehhHHHHHHHHHHHHHHhcccCCCCCcccccccccccccccccccccCCCCccccCCHHHHHHHHHH
Confidence 1111111 11 122222233322222 2222222111000000000000 0 00011245789999999999999999
Q ss_pred HHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCcchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000503 220 DSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFAGP 299 (1459)
Q Consensus 220 ~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P 299 (1459)
+|++++||+++|+.+|||+|+++++++.+.++|++.|+++. + +++++|+++++++|++.++..++++++.+++.+++|
T Consensus 244 ~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P 321 (1495)
T PLN03232 244 TPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEES-R-RPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFVGP 321 (1495)
T ss_pred HHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhh-c-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999765 2 356899999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHH
Q 000503 300 LLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQ 379 (1459)
Q Consensus 300 ~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~ 379 (1459)
++++++++++++++..+.++.+++++++..++.+++.++|.+...+++.++|+.+...+|+|+++++...+++.++|+++
T Consensus 322 ~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~ 401 (1495)
T PLN03232 322 VILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVT 401 (1495)
T ss_pred HHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHH
Confidence 99999999997644445678888888888888899988999999999999999999999999999999888888999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 380 TFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRR 459 (1459)
Q Consensus 380 nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~ 459 (1459)
|+|++|++++.+....+|.+|..|++++++++++|..+|++++++++++++++|++.++++++++.++++++.+|+|.+.
T Consensus 402 n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~ 481 (1495)
T PLN03232 402 NMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGI 481 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHH
Q 000503 460 TGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCL 539 (1459)
Q Consensus 460 ~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l 539 (1459)
++|+++|||+||+||||+.+.+++++.|++|++..++..+..++..+++...|.++++++|++|.+.++++|++.+|+++
T Consensus 482 ~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~~l 561 (1495)
T PLN03232 482 INEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAFTSL 561 (1495)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999988888877777788888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCcccCCCCceEEEEcceEeccCCC
Q 000503 540 ALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNN 619 (1459)
Q Consensus 540 ~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~ 619 (1459)
++++.+..|+..+|..+..+.++++|++||++|++.++..+... .+. ......++++|++|+|+.++
T Consensus 562 ~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~----~~~---------~~~~~~I~~~~vsF~y~~~~ 628 (1495)
T PLN03232 562 SLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN----PPL---------QPGAPAISIKNGYFSWDSKT 628 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc----CCc---------CCCCCcEEEEeeEEEcCCCC
Confidence 99999999999999999999999999999999997665321100 000 01234699999999998532
Q ss_pred ccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeE-EEEcCcEEEEcCCCCCCCCCHHHHhccCCCC
Q 000503 620 EEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS-IHASGSIAYVPQVPWILSGTIRDNILFGKNY 698 (1459)
Q Consensus 620 ~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~-i~~~~~i~y~~Q~~~l~~~ti~~nI~~g~~~ 698 (1459)
+ +++|+|+||++++|++++|+||+|||||||+++|+|+++|++|. +.++++||||+|+|||||+||||||+||+++
T Consensus 629 ~---~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~ 705 (1495)
T PLN03232 629 S---KPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDF 705 (1495)
T ss_pred C---CceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCcc
Confidence 2 34599999999999999999999999999999999999999975 5678999999999999999999999999999
Q ss_pred CHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhc
Q 000503 699 DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIM 778 (1459)
Q Consensus 699 ~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~ 778 (1459)
|+++|++++++|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++|+++++.
T Consensus 706 ~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~ 785 (1495)
T PLN03232 706 ESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMK 785 (1495)
T ss_pred CHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhhhhh-cccccc-h-hhh
Q 000503 779 GPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEM-RTNASS-A-NKQ 855 (1459)
Q Consensus 779 ~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~ 855 (1459)
+ .++++|+|+|||+++.++.||+|++|++|+|+++|+++|+.+..+.+..+..+........+... ..+... . ...
T Consensus 786 ~-~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (1495)
T PLN03232 786 D-ELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKLGPTVT 864 (1495)
T ss_pred h-hhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhccccccccccccccccccccccccc
Confidence 6 56789999999999999999999999999999999999998765544333221110000000000 000000 0 000
Q ss_pred hhhhcc---cccCCCcchhhhhHHHHHhcccchHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC
Q 000503 856 ILLQEK---DVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG-WFITLVICLSAILMQASRNGNDLWLSYWVDTTGS 931 (1459)
Q Consensus 856 ~~~~~~---~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~ 931 (1459)
....+. +..+..+......++|+++.|.+++++|++|+++.| ++..++++++.++.++...++++|+++|++....
T Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~ 944 (1495)
T PLN03232 865 IDVSERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTP 944 (1495)
T ss_pred ccccccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 000000 000000011124466778899999999999999865 3444455556667778888899999999875321
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhc
Q 000503 932 SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDD 1011 (1459)
Q Consensus 932 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~ 1011 (1459)
......+|+++|++++++..++.+++.+++...+.+++.++|++++++++++|++||+++|+|+++|||++|++.+|+
T Consensus 945 --~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~ 1022 (1495)
T PLN03232 945 --KSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDR 1022 (1495)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHH
Confidence 122346799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHH
Q 000503 1012 SLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTI 1091 (1459)
Q Consensus 1012 ~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tI 1091 (1459)
.++..+..++..++.+++.++++++..++++++++|+.++++.++.+|.+++|++++.+..+++|+++++.|+++|+.||
T Consensus 1023 ~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tI 1102 (1495)
T PLN03232 1023 NVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSI 1102 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHH
Confidence 99999999988888888888877777788777888888888888899999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHH
Q 000503 1092 RAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAP 1171 (1459)
Q Consensus 1092 raf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~ 1171 (1459)
|+|+++++|.+++.+..+.+++..+.....++|+..+++.++++++.+.+.+.+.. .+........++.+|++++|+..
T Consensus 1103 raf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~g~~~~~~~~ 1181 (1495)
T PLN03232 1103 RAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLR-NGNAENQAGFASTMGLLLSYTLN 1181 (1495)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccccchHHHHHHHHHHHH
Confidence 99999999999999999999999999888999999999887765554444333332 11111111235678889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccc--cCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeC
Q 000503 1172 IVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEG 1249 (1459)
Q Consensus 1172 ~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~--~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~ 1249 (1459)
+..+++++++.+.++|+.++|+||+.++.+.|+|+.. ....++++||.+|.|+|+||+|+|+++.++||+|+||+|+|
T Consensus 1182 ~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~ 1261 (1495)
T PLN03232 1182 ITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSP 1261 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcC
Confidence 9999999999999999999999999999998887532 22234567999999999999999987777899999999999
Q ss_pred CcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCCCChHHH
Q 000503 1250 GTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKI 1329 (1459)
Q Consensus 1250 GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei 1329 (1459)
|||||||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||++|+|||||||||+++++|+|+
T Consensus 1262 GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei 1341 (1495)
T PLN03232 1262 SEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADL 1341 (1495)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCc
Q 000503 1330 WSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGM 1407 (1459)
Q Consensus 1330 ~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~ 1407 (1459)
|+|+++++++++++++ ||||.++|+|.||||||||||||||||+|+|+|||||||||+||.+||+.||++|++.+++|
T Consensus 1342 ~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~ 1421 (1495)
T PLN03232 1342 WEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSC 1421 (1495)
T ss_pred HHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCC
Confidence 9999999999999998 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhCC
Q 000503 1408 TVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRASTM 1459 (1459)
Q Consensus 1408 TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g~ 1459 (1459)
|+|+||||++|+++||||+|||+|+|+|+|+|+||+++++|.|++|++++|.
T Consensus 1422 TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1422 TMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGP 1473 (1495)
T ss_pred EEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 9999999999999999999999999999999999999888899999998873
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4e-194 Score=1970.02 Aligned_cols=1230 Identities=27% Similarity=0.459 Sum_probs=1074.1
Q ss_pred CCCCCCCChhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCcchHHHHHHHHhHHH
Q 000503 202 TDSGNNQSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPY 281 (1459)
Q Consensus 202 ~~~e~~~~~~s~~~f~Wl~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~ 281 (1459)
.+||+++|+|||++|||+||++++||+++|+.+|||+|+++++++.+.++|++.|+++..++.++++|+++++++|+|++
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~~l~~~~~~~~ 82 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELASAKKNPKLLNALRRCFFWRF 82 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999998765233456899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 282 ICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGS--GHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 359 (1459)
Q Consensus 282 ~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~--~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy 359 (1459)
+..++++++.+++.+++|+++++++++++... ..+.+|++++++++++++.+++.+++.|...++++++|++|...||
T Consensus 83 ~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy 162 (1490)
T TIGR01271 83 VFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIY 162 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999996422 2356889999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000503 360 QKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIA 439 (1459)
Q Consensus 360 ~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~~~~~~~~~~~ 439 (1459)
+|+|+++....++.++|+++|+|++|++++..+...+|.+|..|+++++++++||+++|+++++|++++++++|++.+++
T Consensus 163 ~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~ 242 (1490)
T TIGR01271 163 KKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLG 242 (1490)
T ss_pred HHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 440 NLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFT 519 (1459)
Q Consensus 440 ~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (1459)
+++.++++++++.+|+|++.++|+|+|||+||+||||+.|.+++++.|++|++..++..++..+..+++...|.++++++
T Consensus 243 ~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (1490)
T TIGR01271 243 QKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888888888999999999
Q ss_pred HHHHHHhCCCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCcc
Q 000503 520 FGLFALMGHQLDAAMVFTCLALFNSLISPLN-SFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSN 598 (1459)
Q Consensus 520 f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~-~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~ 598 (1459)
|++|.+.++ ++++.+||+++++++++.|+. .+|..+..+.++.+|++||++||..+|.++...
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~--------------- 386 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY--------------- 386 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc---------------
Confidence 999988755 789999999999999999985 799999999999999999999998766432100
Q ss_pred cCCCCceEEEEcceEeccCCC----------------c-c-----------ccccceeeceeEecCCcEEEEEcCCCCcH
Q 000503 599 FNSKDMAVIMQDATCSWYCNN----------------E-E-----------EQNVVLNQVSLCLPKGSLVAVIGEVGSGK 650 (1459)
Q Consensus 599 ~~~~~~~i~~~~~sf~w~~~~----------------~-~-----------~~~~~l~~i~l~i~~g~~~~ivG~~GsGK 650 (1459)
......++++|++|.|+... . . ..+++|+|+||+|++|++++|+|||||||
T Consensus 387 -~~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGK 465 (1490)
T TIGR01271 387 -NLTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGK 465 (1490)
T ss_pred -cCCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCH
Confidence 01123588999999996310 0 0 01357999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCeEEEEcCcEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCC
Q 000503 651 SSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1459)
Q Consensus 651 Stll~~l~g~~~~~~G~i~~~~~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~ 730 (1459)
||||++|+|+++|++|+|.++|+||||+|+||++++||+|||+||.++++++|++++++|+|++|++.+|+||+|.+|++
T Consensus 466 STLl~~l~G~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~ 545 (1490)
T TIGR01271 466 SSLLMMIMGELEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEG 545 (1490)
T ss_pred HHHHHHHhCCCCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000503 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1459)
Q Consensus 731 g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~ 810 (1459)
|.+|||||||||+||||+|++|+||||||||||||+++++++++.|+.+ +.+++|+|+|||+++.++.||+|++|++|+
T Consensus 546 g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~-~~~~~tvilvtH~~~~~~~ad~ii~l~~g~ 624 (1490)
T TIGR01271 546 GITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCK-LMSNKTRILVTSKLEHLKKADKILLLHEGV 624 (1490)
T ss_pred CCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-HhcCCeEEEEeCChHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999987655 567899999999999999999999999999
Q ss_pred EEEecCHHHHHhccccCccccc--------------------------c--c-----c-hh------hhhhhhhh-----
Q 000503 811 VKWIGSSADLAVSLYSGFWSTN--------------------------E--F-----D-TS------LHMQKQEM----- 845 (1459)
Q Consensus 811 i~~~g~~~~l~~~~~~~~~~~~--------------------------~--~-----~-~~------~~~~~~~~----- 845 (1459)
+++.|+++++......+..... + . + .. ......+.
T Consensus 625 i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (1490)
T TIGR01271 625 CYFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSI 704 (1490)
T ss_pred EEEEcCHHHHHhcChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999998754211100000 0 0 0 00 00000000
Q ss_pred --------------------------c--ccccch------hh----h-h----h--------------------hh---
Q 000503 846 --------------------------R--TNASSA------NK----Q-I----L--------------------LQ--- 859 (1459)
Q Consensus 846 --------------------------~--~~~~~~------~~----~-~----~--------------------~~--- 859 (1459)
. .....+ .. + . . ..
T Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1490)
T TIGR01271 705 ILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNR 784 (1490)
T ss_pred cccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccccccc
Confidence 0 000000 00 0 0 0 00
Q ss_pred -----cc--cc--------------c-------C-CC-------c----c--hhhhhHHHHHhcccchHHHHHHHHhhhh
Q 000503 860 -----EK--DV--------------V-------S-VS-------D----D--AQEIIEVEQRKEGRVELTVYKNYAKFSG 897 (1459)
Q Consensus 860 -----~~--~~--------------~-------~-~~-------~----~--~~~~~~~e~~~~g~v~~~~y~~y~~~~g 897 (1459)
+. +. . . .. + + .....++|+++.|.++|++|++|+++.|
T Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g 864 (1490)
T TIGR01271 785 GENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNR 864 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcC
Confidence 00 00 0 0 00 0 0 0112445677889999999999999876
Q ss_pred H-HHHHHHHHHHHHHHHHHhhhhhhhhhhccccC-----C-CCC-----------CcchhHH-HHHHHHHHHHHHHHHHH
Q 000503 898 W-FITLVICLSAILMQASRNGNDLWLSYWVDTTG-----S-SQT-----------KYSTSFY-LVVLCIFCMFNSFLTLV 958 (1459)
Q Consensus 898 ~-~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~-----~-~~~-----------~~~~~~~-l~~~~~l~~~~~~~~~~ 958 (1459)
+ ..+++++++.++.+++..++++|+.+|..... . ... .....+| +.+|+++.++..++.++
T Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1490)
T TIGR01271 865 NLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFF 944 (1490)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHH
Confidence 5 44444456667778899999999998875210 0 000 0011233 44555555556677778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHH
Q 000503 959 RAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQ 1038 (1459)
Q Consensus 959 ~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~ 1038 (1459)
+.+++...+.+++.++|++++++++++|++||+++|+|+++|||++|++.+|+.+|..+..++..++.+++.++++++..
T Consensus 945 ~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~ 1024 (1490)
T TIGR01271 945 RGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQ 1024 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1039 VFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSE 1118 (1459)
Q Consensus 1039 ~~~~~~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~ 1118 (1459)
|+++++++|++++++.++++|.+++|++++++..+++|+++|+.|+++|+.|||+||++++|.+++.+..+.+++..+..
T Consensus 1025 p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1490)
T TIGR01271 1025 PYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLY 1104 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99988899998889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000503 1119 LTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLE 1198 (1459)
Q Consensus 1119 ~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~ 1198 (1459)
.+.++|+..++++++.+++..++++++.. ....+|.+|++++|++.+...++++++.+.++|..+.|++|+.+
T Consensus 1105 ~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-------~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~ 1177 (1490)
T TIGR01271 1105 LSTLRWFQMRIDIIFVFFFIAVTFIAIGT-------NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFK 1177 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987765444433333311 11346778999999999999999999999999999999999999
Q ss_pred hhcCCcccccc----------------CCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCc
Q 000503 1199 YMDVPQEELCG----------------YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAG 1262 (1459)
Q Consensus 1199 ~~~~~~e~~~~----------------~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSG 1262 (1459)
|.+.|+|+... ...+++.||..|.|+|+||+|+|+++.+++|+|+||+|+||||||||||||||
T Consensus 1178 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsG 1257 (1490)
T TIGR01271 1178 FIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSG 1257 (1490)
T ss_pred HhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCC
Confidence 99887764211 01234579999999999999999987788999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHH
Q 000503 1263 KSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEV 1342 (1459)
Q Consensus 1263 KSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i 1342 (1459)
||||+++|+|+++ ++|+|.|||+||++++++++|++|++|||||++|+||||+||||++.++|+++|+||+++++++++
T Consensus 1258 KSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i 1336 (1490)
T TIGR01271 1258 KSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVI 1336 (1490)
T ss_pred HHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHH
Confidence 9999999999998 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHh
Q 000503 1343 EAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL 1420 (1459)
Q Consensus 1343 ~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~ 1420 (1459)
+++ ||||.|+|+|.||||||||||||||||||+|+|||||||||+||.+||+.|+++|++.+++||||+||||++++.
T Consensus 1337 ~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~ 1416 (1490)
T TIGR01271 1337 EQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALL 1416 (1490)
T ss_pred HhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH
Confidence 998 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000503 1421 NMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1458 (1459)
Q Consensus 1421 ~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1458 (1459)
+||||+||++|+|+|+|+|++|++ ++|.|++|+++++
T Consensus 1417 ~~DrIlvL~~G~ivE~g~p~~Ll~-~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1417 ECQQFLVIEGSSVKQYDSIQKLLN-ETSLFKQAMSAAD 1453 (1490)
T ss_pred hCCEEEEEECCEEEEeCCHHHHHc-CCcHHHHHHHHhC
Confidence 999999999999999999999997 4789999999875
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.6e-184 Score=1870.94 Aligned_cols=1250 Identities=32% Similarity=0.526 Sum_probs=1066.8
Q ss_pred CCCCCCCCChhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhh-------------------
Q 000503 201 NTDSGNNQSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRS------------------- 261 (1459)
Q Consensus 201 ~~~~e~~~~~~s~~~f~Wl~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~------------------- 261 (1459)
.+.||+++||+.|+++.|++|++.+..|..|+.+|||+-..+.++-++..++.+..++...
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1560)
T PTZ00243 58 TPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLDA 137 (1560)
T ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeeccc
Confidence 4579999999999999999999999999999999999988888876555555443222100
Q ss_pred --------------------------------c-----------------------------------------------
Q 000503 262 --------------------------------C----------------------------------------------- 262 (1459)
Q Consensus 262 --------------------------------~----------------------------------------------- 262 (1459)
+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (1560)
T PTZ00243 138 SSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSST 217 (1560)
T ss_pred cccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeeccc
Confidence 0
Q ss_pred ----------CCCCcchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHHHHHHHHHHHHH
Q 000503 263 ----------NCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGS-GHLDGYVLAIALGLTSIL 331 (1459)
Q Consensus 263 ----------~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~-~~~~g~~l~~~l~~~~~~ 331 (1459)
..+..+|+++++++|++.++..++++++.+++.+++|++++.++++++++. ....|+++++++++++++
T Consensus 218 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~~ 297 (1560)
T PTZ00243 218 GSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQLI 297 (1560)
T ss_pred ccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHH
Confidence 012347999999999999999999999999999999999999999997633 334578888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 332 KSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERS--EFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVA 409 (1459)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~--~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~ 409 (1459)
++++.++|.|...+.+.++|++|...||+|+++++..+.. +.++|+++|+|++|++++..+..++|.+|.+|++++++
T Consensus 298 ~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~~ 377 (1560)
T PTZ00243 298 QSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLLS 377 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887654 56889999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHH
Q 000503 410 LYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSS 489 (1459)
Q Consensus 410 ~~lL~~~lg~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~ 489 (1459)
+++||+.+|+++++|++++++++|++.++++++.+.++++++++|+|++.++|+++|||+||+||||+.|.+++++.|++
T Consensus 378 ~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~ 457 (1560)
T PTZ00243 378 ILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRAR 457 (1560)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 490 EVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRL 569 (1459)
Q Consensus 490 El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI 569 (1459)
|++.+++..+...+..++++.+|.++.+++|++|.+.+++||++.+||++++|++++.|+.++|..++.+.++++|++||
T Consensus 458 El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI 537 (1560)
T PTZ00243 458 ELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRI 537 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCCCchh----hhh-----hcCCCCcc-----cCC---------------------------------CcccCCC
Q 000503 570 TRFLGCSEYKHE----LEQ-----AANSPSYI-----SNG---------------------------------LSNFNSK 602 (1459)
Q Consensus 570 ~~fL~~~e~~~~----~~~-----~~~~~~~~-----~~~---------------------------------~~~~~~~ 602 (1459)
++||+.+|.... ... ....+... .+. .......
T Consensus 538 ~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1560)
T PTZ00243 538 STFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHP 617 (1560)
T ss_pred HHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccc
Confidence 999987663110 000 00000000 000 0000011
Q ss_pred CceEEEEcceEeccCCCc----------------------------------cccccceeeceeEecCCcEEEEEcCCCC
Q 000503 603 DMAVIMQDATCSWYCNNE----------------------------------EEQNVVLNQVSLCLPKGSLVAVIGEVGS 648 (1459)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~----------------------------------~~~~~~l~~i~l~i~~g~~~~ivG~~Gs 648 (1459)
...+.++|++|+|+.... ...+++|+|+||++++|++++|+|||||
T Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGs 697 (1560)
T PTZ00243 618 SPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGS 697 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCC
Confidence 234667777777652100 0123579999999999999999999999
Q ss_pred cHHHHHHHHhcCccCCCeEEEEcCcEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCccccc
Q 000503 649 GKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIG 728 (1459)
Q Consensus 649 GKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig 728 (1459)
|||||+++|+|+++|++|+|.++++||||+|+||++++||+|||.|+.++++++|++++++|+|++|++.+|+|++|.+|
T Consensus 698 GKSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~ 777 (1560)
T PTZ00243 698 GKSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEIG 777 (1560)
T ss_pred cHHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHhc
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred CCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeC
Q 000503 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 808 (1459)
Q Consensus 729 ~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~ 808 (1459)
++|.+|||||||||+||||+|++|++||||||||+||++++++++++++.+ ..+++|+|++||+++.++.||+|++|++
T Consensus 778 ~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~-~~~~~TvIlvTH~~~~~~~ad~ii~l~~ 856 (1560)
T PTZ00243 778 EKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLG-ALAGKTRVLATHQVHVVPRADYVVALGD 856 (1560)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHH-hhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999987665 4468999999999999999999999999
Q ss_pred CeEEEecCHHHHHhccccCccccccc---ch--hhhhhhh--hhccccc---c-h---hhhhhh-hcccccCCCcchhhh
Q 000503 809 GQVKWIGSSADLAVSLYSGFWSTNEF---DT--SLHMQKQ--EMRTNAS---S-A---NKQILL-QEKDVVSVSDDAQEI 873 (1459)
Q Consensus 809 G~i~~~g~~~~l~~~~~~~~~~~~~~---~~--~~~~~~~--~~~~~~~---~-~---~~~~~~-~~~~~~~~~~~~~~~ 873 (1459)
|++.++|+++++..... +..+.... .. ......+ ....... . . ..+... ...+...........
T Consensus 857 G~i~~~G~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 935 (1560)
T PTZ00243 857 GRVEFSGSSADFMRTSL-YATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRL 935 (1560)
T ss_pred CEEEEecCHHHHHhChH-HHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 99999999999875421 11111000 00 0000000 0000000 0 0 000000 000000000112234
Q ss_pred hHHHHHhcccchHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHH
Q 000503 874 IEVEQRKEGRVELTVYKNYAKFSGWFI-TLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFN 952 (1459)
Q Consensus 874 ~~~e~~~~g~v~~~~y~~y~~~~g~~~-~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~ 952 (1459)
.++|+++.|.++|++|++|++..|... .+.++++.++.+++..++++|+++|++... ......|+++|+++.++.
T Consensus 936 ~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~----~~~~~~~l~~y~~~~~~~ 1011 (1560)
T PTZ00243 936 MTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSF----KLSAATYLYVYLGIVLLG 1011 (1560)
T ss_pred hhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----CCCcccHHHHHHHHHHHH
Confidence 566777889999999999999876443 333444455667788889999999987431 122346788888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhh
Q 000503 953 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAV 1032 (1459)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~ 1032 (1459)
.++.+++.+.....+.++++++|+.++++++++|++|||++++|+++|||++|++.+|+.++..+..++..++.+++.++
T Consensus 1012 ~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li 1091 (1560)
T PTZ00243 1012 TFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSIL 1091 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777888899999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHH
Q 000503 1033 VLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQ 1112 (1459)
Q Consensus 1033 ~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~ 1112 (1459)
++++..|+++++++|+.++++.++++|.+..|++++.+..+++|+++++.|+++|+.|||+|++++++.+++.+..|.+.
T Consensus 1092 ~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~ 1171 (1560)
T PTZ00243 1092 VTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVY 1171 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 88888898888888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1113 RTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVS 1192 (1459)
Q Consensus 1113 ~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s 1192 (1459)
+..+.....++|+..+++++..+++.+++++.+..... ..+..++|.++++++|+..+...+.++++.+.++|+.+.|
T Consensus 1172 ~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s 1249 (1560)
T PTZ00243 1172 SCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTML--RATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNS 1249 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988776554443333322110 1122468899999999999999999999999999999999
Q ss_pred HHHHHhhhcC-Ccccccc-------------------------CCCCC---CCCCCCccEEEEEEEEEecCCCCccceee
Q 000503 1193 LERVLEYMDV-PQEELCG-------------------------YQSLS---PDWPFQGLIEFQNVTMRYKPSLPAALHDI 1243 (1459)
Q Consensus 1193 ~~Ri~~~~~~-~~e~~~~-------------------------~~~~~---~~wp~~g~I~f~nVs~~Y~~~~~~vL~~i 1243 (1459)
++|+.+|.+. |+|+... ...++ +.||..|.|+|+||+|+|+++.++||+||
T Consensus 1250 ~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~v 1329 (1560)
T PTZ00243 1250 VERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGV 1329 (1560)
T ss_pred HHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecc
Confidence 9999999964 3332100 01111 23556799999999999988777899999
Q ss_pred eEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCC
Q 000503 1244 NFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM 1323 (1459)
Q Consensus 1244 sl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~ 1323 (1459)
||+|+||||||||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++
T Consensus 1330 sf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~ 1409 (1560)
T PTZ00243 1330 SFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLE 1409 (1560)
T ss_pred eEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccC-CCEEEEeccCcCCCHHHHHHHHHHH
Q 000503 1324 NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKS-SKVLCLDECTANVDAQTASILQNAI 1400 (1459)
Q Consensus 1324 ~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~-~~ILlLDEaTS~lD~~te~~I~~~I 1400 (1459)
++|+|+|+|+++|+++++++++ ||||.++|+|.|||||||||||||||||++ |+|||||||||+||.+||+.||++|
T Consensus 1410 ~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L 1489 (1560)
T PTZ00243 1410 ASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATV 1489 (1560)
T ss_pred CCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHH
Confidence 9999999999999999999998 999999999999999999999999999996 8999999999999999999999999
Q ss_pred HHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000503 1401 SSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1458 (1459)
Q Consensus 1401 ~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1458 (1459)
++.+++||||+||||++++.+||||+||++|+|+|+|+|+||+++++|.|++|++++|
T Consensus 1490 ~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1490 MSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred HHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999987889999999876
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-144 Score=1363.17 Aligned_cols=1156 Identities=21% Similarity=0.264 Sum_probs=845.6
Q ss_pred chHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhccCCC-c-----hHHHHHHHHHHHHHHHHHHHH-H
Q 000503 268 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLL---NKLIKFLQQGSG-H-----LDGYVLAIALGLTSILKSFFD-T 337 (1459)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll---~~li~~~~~~~~-~-----~~g~~l~~~l~~~~~~~~~~~-~ 337 (1459)
++++-...+-++++++..+..+...+.+..+|++. .++.+.+....+ . ..-.++.+.+.+..++.+++. .
T Consensus 14 ~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~~ 93 (1228)
T KOG0055|consen 14 SFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQVS 93 (1228)
T ss_pred chHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444556677777777777788888888765 344444433111 1 111111122222222222222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
Q 000503 338 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-----SFHDAWSLPFQIGVALYL 412 (1459)
Q Consensus 338 ~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-----~~~~~~~~p~~i~i~~~l 412 (1459)
.+.+...|...++|.... +..||...+.++...+|++.+-|+.|+++|++++. ++|.+-....-++++++.
T Consensus 94 c~~~~geRq~~riR~~yl----~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~ 169 (1228)
T KOG0055|consen 94 CWMRTGERQTARIRSKYL----KAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYY 169 (1228)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666666555 45566677778777889999999999999998543 333333333333343333
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHH
Q 000503 413 LYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVK 492 (1459)
Q Consensus 413 L~~~lg~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~ 492 (1459)
.|++ +++.+.+..++.......++.+.+...+.+++..+.-+...|++.+||+|-.|+.|+...++..+.-+.-.+
T Consensus 170 -~W~L---tlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k 245 (1228)
T KOG0055|consen 170 -GWKL---TLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALK 245 (1228)
T ss_pred -HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHH
Confidence 3333 333444444445556677888888888888888899999999999999999999999888887665433333
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 493 HLSTRKYLDAWCVFFW--ATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLT 570 (1459)
Q Consensus 493 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~ 570 (1459)
...+......+...+. .+.......+|||..++..+..+++.+|+.+...-.-...|.+....++.+..|+++..+|.
T Consensus 246 ~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~ 325 (1228)
T KOG0055|consen 246 FGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIF 325 (1228)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHH
Confidence 3333333333322221 12223445678887778888899999999886666666788888899999999999999999
Q ss_pred HhhCCCCCchhhhhhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcH
Q 000503 571 RFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGK 650 (1459)
Q Consensus 571 ~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGK 650 (1459)
+-++.....+.... . + .......+.|+++|+.|+||++++ .++|+|+||+||+|+.+++||||||||
T Consensus 326 ~~i~~~~~i~~~~~-~--------~-~~~~~~~g~ief~nV~FsYPsRpd---v~Il~g~sl~i~~G~~valVG~SGsGK 392 (1228)
T KOG0055|consen 326 ETIDRKPSIDPYSK-G--------G-RVLSSIKGEIEFRNVCFSYPSRPD---VKILKGVSLKIPSGQTVALVGPSGSGK 392 (1228)
T ss_pred HHhcCCCCCCcccc-c--------C-CcccccccceEEEEEEecCCCCCc---chhhCCeEEEeCCCCEEEEECCCCCCH
Confidence 98865432221110 0 0 011235678999999999998754 345999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhH
Q 000503 651 SSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDI 716 (1459)
Q Consensus 651 Stll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di 716 (1459)
||++++|.|.|+|++|+|.++| +||.|.|+|.||++||+|||.||+| -+.++..++++....++.+
T Consensus 393 ST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi 472 (1228)
T KOG0055|consen 393 STLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFI 472 (1228)
T ss_pred HHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHH
Confidence 9999999999999999999987 5999999999999999999999985 4678888999999999999
Q ss_pred hhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcch
Q 000503 717 SLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA 796 (1459)
Q Consensus 717 ~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~ 796 (1459)
..+|+|++|.+||+|..|||||||||||||||.++|+||||||||||||+++++.+ +.++.. ..+|+|.|+|+||++.
T Consensus 473 ~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~V-q~ALd~-~~~grTTivVaHRLSt 550 (1228)
T KOG0055|consen 473 LKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVV-QEALDK-ASKGRTTIVVAHRLST 550 (1228)
T ss_pred HhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHH-HHHHHH-hhcCCeEEEEeeehhh
Confidence 99999999999999999999999999999999999999999999999999977655 444544 7789999999999999
Q ss_pred hhcCCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhh-hh----hcccccch--hhhhhhhcccc--cCCC
Q 000503 797 ISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQK-QE----MRTNASSA--NKQILLQEKDV--VSVS 867 (1459)
Q Consensus 797 l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~--~~~~~~~~~~~--~~~~ 867 (1459)
+++||+|++|++|+|+|.|+|+||++..+.+.++.+..+.....+. ++ .+...... ........+.. ....
T Consensus 551 IrnaD~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~ 630 (1228)
T KOG0055|consen 551 IRNADKIAVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLL 630 (1228)
T ss_pred hhccCEEEEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccc
Confidence 9999999999999999999999999888777665322111110000 00 00000000 00000000000 0000
Q ss_pred --cchhhhhHHHHHhcccchHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCC---CCCcchhH
Q 000503 868 --DDAQEIIEVEQRKEGRVELTVYKNYAKF--SGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSS---QTKYSTSF 940 (1459)
Q Consensus 868 --~~~~~~~~~e~~~~g~v~~~~y~~y~~~--~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~---~~~~~~~~ 940 (1459)
...++..++...+.. ....++.-++. ..|..+++..++.++..+....-.+.+++..+..... ........
T Consensus 631 ~~~~~~e~~~~~~~~~~--~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~ 708 (1228)
T KOG0055|consen 631 SVKPEGEDPEEPVSEED--EKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRA 708 (1228)
T ss_pred ccccccccccccccccc--ccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHH
Confidence 000000000000001 11112233331 2455555555555554443333333333222211100 11122345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc--cChhhHHHHHhhhhhhhhchhhHHHH
Q 000503 941 YLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQ--TPGGRILNRFSSDLYMIDDSLPFILN 1018 (1459)
Q Consensus 941 ~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~--~~~G~ilnrfs~D~~~id~~l~~~l~ 1018 (1459)
|..+|++++++..++.++..+++...+.+...++|.++|++++++++.|||. +. |.+.+|+++|...+...+...+.
T Consensus 709 ~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~ 787 (1228)
T KOG0055|consen 709 WALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLS 787 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999996 56 99999999999999988888888
Q ss_pred HHHHHHHhHHHhhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhchhHhHHHhhhccHHHHHhc
Q 000503 1019 ILLANFVGLLGIAVVLSYVQVFF---LLLLVPFWFIYSKLQFFYRS-TSRELRRLDSVSRSPIYASFTETLNGSSTIRAF 1094 (1459)
Q Consensus 1019 ~~~~~~~~~l~~~~~~~~~~~~~---~~~~~pl~~~~~~~~~~y~~-~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf 1094 (1459)
.++.++..++..+++.++..|-+ .+++.|++++..+.+..+.. .+++.+.... .......|++.+++||++|
T Consensus 788 ~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~----ea~~iA~eai~NIrTV~al 863 (1228)
T KOG0055|consen 788 LVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYE----EASKIAIEAVSNIRTVAAL 863 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH----HHHHHHHHHHHhHHHHHHH
Confidence 88888888777777766666654 45567777776666665543 3333332222 2234678999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHH
Q 000503 1095 KSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVS 1174 (1459)
Q Consensus 1095 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~ 1174 (1459)
+.|++|.+.|.+.++...+...... .|.++...+-..++.+.-++...++.. ....+..++..+...+..+..-..
T Consensus 864 ~~e~~~~~~y~~~l~~p~~~~~~~~---~i~gl~f~~sqs~~~~~~A~~f~~G~~-Li~~g~~~~~~~~~vf~~l~~ta~ 939 (1228)
T KOG0055|consen 864 CAEEKFMELYKEELEKPRKSSFKRG---LISGLGFGFSQSLLFFVYALSFWYGAR-LISNGEMTFEDVFRVFMALSFTAM 939 (1228)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhHH-HHhcCCcCHHHHHHHHHHHHHHHH
Confidence 9999999999998888777665443 333333333222222222221111111 011234455555544444444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCC-CCccceeeeEEEeCCcEE
Q 000503 1175 LLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQV 1253 (1459)
Q Consensus 1175 ~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~Gekv 1253 (1459)
.+.......++.-++..|+.+++++++.+++-...........+.+|+|+|+||+|+||.. ..+||+|+||+|++||.+
T Consensus 940 ~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTv 1019 (1228)
T KOG0055|consen 940 ALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTV 1019 (1228)
T ss_pred HHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEE
Confidence 5667778888999999999999999988774322111111112468999999999999743 236999999999999999
Q ss_pred EEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCC-CCChHHHHHH
Q 000503 1254 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSV 1332 (1459)
Q Consensus 1254 gIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~-~~~d~ei~~a 1332 (1459)
|+||||||||||++.+|.|+|+|++|.|.|||.||+++++++||++|++|+|||.||++||||||.++. ..+.+||.+|
T Consensus 1020 ALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~A 1099 (1228)
T KOG0055|consen 1020 ALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEA 1099 (1228)
T ss_pred EEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999983 4589999999
Q ss_pred HHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEE
Q 000503 1333 LEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVI 1410 (1459)
Q Consensus 1333 L~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI 1410 (1459)
++.++.+++|.++ ||||.|||+|.+||||||||||||||++|||||||||||||+||.++|+.+|++|++...++|.|
T Consensus 1100 ak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~I 1179 (1228)
T KOG0055|consen 1100 AKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTI 1179 (1228)
T ss_pred HHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEE
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000503 1411 TIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1458 (1459)
Q Consensus 1411 ~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1458 (1459)
+|||||+||++||.|+|+++|+|+|+|+|++|++ ++|.|++|++.+.
T Consensus 1180 vIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1180 VIAHRLSTIQNADVIAVLKNGKVVEQGTHDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred EEecchhhhhcCCEEEEEECCEEEecccHHHHHh-CCCchHHHhhhcc
Confidence 9999999999999999999999999999999999 5689999998653
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.9e-133 Score=1360.13 Aligned_cols=1163 Identities=17% Similarity=0.210 Sum_probs=847.2
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1459)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 348 (1459)
+++-.-+.+++.++.+.++.++..++....|+++.++++.+..+.. ...+++.++++.++..++...+.+...+++.
T Consensus 50 ~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (1466)
T PTZ00265 50 PFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN---VNDIIFSLVLIGIFQFILSFISSFCMDVVTT 126 (1466)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344556667777788888888888899999999987642211 1223344445556666677777888889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHHH
Q 000503 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYL-LYTQVKFAFVSGLA 426 (1459)
Q Consensus 349 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~p~~i~i~~~l-L~~~lg~a~l~~~~ 426 (1459)
++...+...+|+|.++++...++..+.|++.+.++.|++.+...+ ..+..+...++.++.++++ ++..+.++. +.++
T Consensus 127 ~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lal-v~l~ 205 (1466)
T PTZ00265 127 KILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTL-CITC 205 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHH
Confidence 999999999999999999988888888999999999999988754 3455555555554444333 232222232 2233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 427 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 506 (1459)
Q Consensus 427 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 506 (1459)
++.+++.+..++.+++.+..++..+..++..+.+.|.++||++||.|+.|+.+.+++.+..+...+...+.....++...
T Consensus 206 ~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~ 285 (1466)
T PTZ00265 206 VFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIG 285 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445667788888888888888899999999999999999999999999999887655555544454444444322
Q ss_pred HHHHH--HHHHHHHHHHHHHHhCC--------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 000503 507 FWATT--PTLFSLFTFGLFALMGH--------QLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCS 576 (1459)
Q Consensus 507 ~~~~~--~~~~~~~~f~~~~~~~~--------~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~ 576 (1459)
+.... ...+.++++|.+.+..+ .++++.+++.+........++..+...+..+..+.+|.+||.+.++.+
T Consensus 286 ~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~ 365 (1466)
T PTZ00265 286 MINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRK 365 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22222 22345567888877653 588898888765554445556666677889999999999999999764
Q ss_pred CCchhhhhhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHH
Q 000503 577 EYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNS 656 (1459)
Q Consensus 577 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~ 656 (1459)
+..+.. . .... .+ ....++++|++|+|+.+++ .++|+|+||+|++|++++|+||||||||||+++
T Consensus 366 ~~~~~~-~-~~~~---------~~-~~~~I~~~nVsf~Y~~~~~---~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~l 430 (1466)
T PTZ00265 366 PLVENN-D-DGKK---------LK-DIKKIQFKNVRFHYDTRKD---VEIYKDLNFTLTEGKTYAFVGESGCGKSTILKL 430 (1466)
T ss_pred CCCCCC-C-CCcc---------CC-CCCcEEEEEEEEEcCCCCC---CceeccceEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 322110 0 0000 01 1136999999999975422 346999999999999999999999999999999
Q ss_pred HhcCccCCCeEEEEc-C-------------cEEEEcCCCCCCCCCHHHHhccCCC-------------------------
Q 000503 657 ILGEMMLTHGSIHAS-G-------------SIAYVPQVPWILSGTIRDNILFGKN------------------------- 697 (1459)
Q Consensus 657 l~g~~~~~~G~i~~~-~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~------------------------- 697 (1459)
|+|.++|++|+|.++ | .||||+|+|.+|++||+|||.+|..
T Consensus 431 L~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (1466)
T PTZ00265 431 IERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNK 510 (1466)
T ss_pred HHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccc
Confidence 999999999999994 3 4899999999999999999998741
Q ss_pred ---------------------------------CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHH
Q 000503 698 ---------------------------------YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 744 (1459)
Q Consensus 698 ---------------------------------~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRval 744 (1459)
.++++..++++.+++++.+..+|+|++|.+|++|.+|||||||||+|
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaI 590 (1466)
T PTZ00265 511 RNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISI 590 (1466)
T ss_pred cccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHH
Confidence 23456778888889999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhcCCEEEEEeCC--------------
Q 000503 745 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKG-------------- 809 (1459)
Q Consensus 745 ARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~~~d~i~~l~~G-------------- 809 (1459)
|||++++|+|||||||||+||+++++.+.+. +.... .+++|+|+|||+++.+..||+|++|++|
T Consensus 591 ARAll~~P~ILlLDEpTSaLD~~se~~i~~~-L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~ 669 (1466)
T PTZ00265 591 ARAIIRNPKILILDEATSSLDNKSEYLVQKT-INNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGED 669 (1466)
T ss_pred HHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccc
Confidence 9999999999999999999999999988776 43311 2478999999999999999999999886
Q ss_pred ---------------------------------eEEEecCHHHHHh-ccccCcccccccchhhhhh-----hhhh--ccc
Q 000503 810 ---------------------------------QVKWIGSSADLAV-SLYSGFWSTNEFDTSLHMQ-----KQEM--RTN 848 (1459)
Q Consensus 810 ---------------------------------~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~-----~~~~--~~~ 848 (1459)
+|+|+|+|+|+++ ..+.+..+.+......... .... ...
T Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~ 749 (1466)
T PTZ00265 670 PTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSS 749 (1466)
T ss_pred ccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccc
Confidence 5999999999987 4555554432111000000 0000 000
Q ss_pred c-c-ch-h---hhhhh---hccc------ccCCCcch-hhhhHH------HHH--hcccc--hHHHHHHHHhhhhHHHHH
Q 000503 849 A-S-SA-N---KQILL---QEKD------VVSVSDDA-QEIIEV------EQR--KEGRV--ELTVYKNYAKFSGWFITL 902 (1459)
Q Consensus 849 ~-~-~~-~---~~~~~---~~~~------~~~~~~~~-~~~~~~------e~~--~~g~v--~~~~y~~y~~~~g~~~~~ 902 (1459)
. . .. . .+... .+.. .....++. .+...+ ++. ..... .+..+..+++...+. ++
T Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 828 (1466)
T PTZ00265 750 AYKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKD-VT 828 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHH-HH
Confidence 0 0 00 0 00000 0000 00000000 000000 000 00001 111222333222222 22
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 903 VICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTK 981 (1459)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~ 981 (1459)
+.++++++..++....++.++.+.+.... .........|..++++++++..++.+++.++..+.+.+...++|..++++
T Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ 908 (1466)
T PTZ00265 829 IIALSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFEN 908 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233444444555555556655542110 00111234567777778888888889999999999999999999999999
Q ss_pred HhcCccccccc--cChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 982 IVNAPVLFFDQ--TPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFY 1059 (1459)
Q Consensus 982 vl~~p~~ff~~--~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y 1059 (1459)
+++.|++||++ +++|++++|+++|++.+...+...+..++..++.+++.++++.+..|.++++++|+.++........
T Consensus 909 ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~ 988 (1466)
T PTZ00265 909 ILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIR 988 (1466)
T ss_pred HHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999996 8899999999999999999888888888888888887777777788877766655444332221111
Q ss_pred HH--HHHHHHHH-------------HHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1060 RS--TSRELRRL-------------DSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLW 1124 (1459)
Q Consensus 1060 ~~--~sr~l~~l-------------~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w 1124 (1459)
.+ ..++.++. +.+..+.....+.|+++|++|||+|+.|+++.+++.+..+...+..........+
T Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1466)
T PTZ00265 989 ARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSM 1068 (1466)
T ss_pred HHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11111111 1222345677899999999999999999999999999988887766655444333
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 000503 1125 LSLRLQLLAAFIISFIATM-AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVP 1203 (1459)
Q Consensus 1125 l~~~l~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~ 1203 (1459)
+....+.+..+...++..+ ..+.. .+..+.|.+..++.+.+.....+..+...+.+++.+..+.+|+.++++.+
T Consensus 1069 ~~~~~~~~~~~~~~~~~~~G~~lv~-----~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~ 1143 (1466)
T PTZ00265 1069 LWGFSQSAQLFINSFAYWFGSFLIR-----RGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRK 1143 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3333333322221111111 11111 23445666555554444444456777888999999999999999999876
Q ss_pred cccccc-CCCCC--CCCCCCccEEEEEEEEEecCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC---
Q 000503 1204 QEELCG-YQSLS--PDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--- 1276 (1459)
Q Consensus 1204 ~e~~~~-~~~~~--~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~--- 1276 (1459)
++.... ..... +..+..|.|+|+||+|+|++. ..+||+|+||+|+|||++||||+||||||||+++|+|+|+|
T Consensus 1144 ~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~ 1223 (1466)
T PTZ00265 1144 SNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKND 1223 (1466)
T ss_pred CcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccc
Confidence 542111 11111 112346889999999999743 24799999999999999999999999999999999999999
Q ss_pred ---------------------------------------------------CCceEEECCEeCCCCChHHHhcccEEEeC
Q 000503 1277 ---------------------------------------------------CGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1459)
Q Consensus 1277 ---------------------------------------------------~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1459)
++|+|+|||+||++++++++|++|+||||
T Consensus 1224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Q 1303 (1466)
T PTZ00265 1224 HHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQ 1303 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCC
Confidence 69999999999999999999999999999
Q ss_pred CCcCCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000503 1306 SPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1459)
Q Consensus 1306 dp~lf~gTIReNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1459)
||+||+|||||||.++. ..+|+|+++|++.++++++|.++ ||||.|||+|.+|||||||||||||||+|+|+|||||
T Consensus 1304 ep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1304 EPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred CCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999885 47999999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeC----CeE-EEecChhHHhccCCcHHHHHHH
Q 000503 1383 ECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDH----GHL-VEQGNPQTLLQDECSVFSSFVR 1455 (1459)
Q Consensus 1383 EaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~----G~I-vE~G~p~eLl~~~~~~f~~l~~ 1455 (1459)
||||+||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |++ +|.|+|+||+++++|.|++|++
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~ 1463 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVK 1463 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHh
Confidence 9999999999999999999873 69999999999999999999999999 995 4999999999865689999998
Q ss_pred hh
Q 000503 1456 AS 1457 (1459)
Q Consensus 1456 ~~ 1457 (1459)
.+
T Consensus 1464 ~~ 1465 (1466)
T PTZ00265 1464 LA 1465 (1466)
T ss_pred hc
Confidence 65
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-88 Score=812.55 Aligned_cols=561 Identities=26% Similarity=0.365 Sum_probs=456.1
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 886 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFA 964 (1459)
Q Consensus 886 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~ 964 (1459)
+...+.|.+.-.+++...+ ++.++......+.|.++...++.... ............+..++.++.+++..++.+++.
T Consensus 135 ~~rl~~l~~~~~~~l~~a~-~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~ 213 (716)
T KOG0058|consen 135 LKRLLGLLKPEWKWLVAAF-VLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQ 213 (716)
T ss_pred HHHHHHHhchhHHHHHHHH-HHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455554444443333 33333344455555555444443211 111222333455667777888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHH
Q 000503 965 FGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLL 1044 (1459)
Q Consensus 965 ~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1044 (1459)
+.+.+...++|..+|++++++.+.|||.+.+|++++|++.|...+.+.++..+...+.+.+..++.+..+++.+|-+.++
T Consensus 214 ~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv 293 (716)
T KOG0058|consen 214 YAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLV 293 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988876443
Q ss_pred ---HHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1045 ---LVPF-WFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1120 (1459)
Q Consensus 1045 ---~~pl-~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~ 1120 (1459)
.+|+ .++...+.++|++.+++.+ ++-+.......|.+++++|||+|+.|++..++|.+.+++..+...+...
T Consensus 294 ~~i~~P~v~~~~~~yG~~~rklS~~~Q----~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~ 369 (716)
T KOG0058|consen 294 TLIVVPIVALVAKIYGKYLRKLSKQTQ----DALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAV 369 (716)
T ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333 3344445556666666655 3444556778899999999999999999999998888876665544332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000503 1121 ASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1200 (1459)
Q Consensus 1121 ~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~ 1200 (1459)
....+....++........+ ..++.+ ....+.+++|.+...+.|...+...+.++...|.++.+..+|.+|++|++
T Consensus 370 a~~~f~~~~~~~~~~~~~si---L~~Gg~-Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~ 445 (716)
T KOG0058|consen 370 AYGIFFGSTNLLGNLAVLSI---LFYGGH-LVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELM 445 (716)
T ss_pred HhhHhHhHHHHHHhHHHHHH---HHhccc-hhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHh
Confidence 22222222222222211111 111111 12246778999999999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCCccEEEEEEEEEecCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCc
Q 000503 1201 DVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1279 (1459)
Q Consensus 1201 ~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G 1279 (1459)
|.+|.-+.. ....|. ..+|.|+|+||+|+|+.. ..+||||+||+|+|||.||+||||||||||++++|.|+|+|++|
T Consensus 446 dr~P~i~~~-G~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG 523 (716)
T KOG0058|consen 446 DRKPRIPLT-GTLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSG 523 (716)
T ss_pred ccCCCCCCC-Cccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 987754222 111222 568999999999999754 34699999999999999999999999999999999999999999
Q ss_pred eEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCC
Q 000503 1280 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1356 (1459)
Q Consensus 1280 ~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~ 1356 (1459)
+|++||+||++++.+.||++|++|.|||+||+|||||||.++.+ .+||||.+|.++++.++||.++ |+||.|||+|.
T Consensus 524 ~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 524 RILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGS 603 (716)
T ss_pred eEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccc
Confidence 99999999999999999999999999999999999999988754 5899999999999999999999 99999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEe
Q 000503 1357 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1436 (1459)
Q Consensus 1357 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~ 1436 (1459)
.|||||||||||||||+|||+|||||||||+||.++|..+|++|.+..+++|||+|||||+||+.+|+|+|+++|+|+|.
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~ 683 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEM 683 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHhccCCcHHHHHHHhh
Q 000503 1437 GNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1437 G~p~eLl~~~~~~f~~l~~~~ 1457 (1459)
|+|+||+++++|.|++|++++
T Consensus 684 G~h~eLl~~~~gly~~Lv~~q 704 (716)
T KOG0058|consen 684 GTHDELLSKPNGLYAKLVQRQ 704 (716)
T ss_pred ccHHHHhhCcccHHHHHHHHh
Confidence 999999999999999999875
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.6e-80 Score=775.89 Aligned_cols=546 Identities=27% Similarity=0.392 Sum_probs=458.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000503 905 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 984 (1459)
Q Consensus 905 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 984 (1459)
++..++.+....+.+++.+..+|..-.............++++.+++..++.+++.+++...+.|....+-.++++++++
T Consensus 160 ~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hll~ 239 (709)
T COG2274 160 LLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHLLR 239 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHc
Confidence 34555666677777777777776542222222333334556677788889999999999999999999999999999999
Q ss_pred CccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 985 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1064 (1459)
Q Consensus 985 ~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr 1064 (1459)
.|++||++.++|++++|+ +|++.|.+.+.......+..+...+..++++.+.+|.++++.+....++..+.....+..|
T Consensus 240 Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~ 318 (709)
T COG2274 240 LPLSYFEKRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLR 318 (709)
T ss_pred CcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 5688888888777777777776667777777777776655444333333332222222223
Q ss_pred HHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1065 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1144 (1459)
Q Consensus 1065 ~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1144 (1459)
+..+...+..+...++..|++.|++|||+.+.|.++..++++..++..+..+.......|.+....++..+....+..+.
T Consensus 319 ~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~iL~~G 398 (709)
T COG2274 319 RKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLILWFG 398 (709)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344455667899999999999999999999999999999999999998888888877766666554333222222
Q ss_pred HHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEE
Q 000503 1145 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIE 1224 (1459)
Q Consensus 1145 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~ 1224 (1459)
+... ..+..+.|.+.........+.+++..++..|++++....+.+|+.+.++.|+|+..+.. +...|+.+|.|+
T Consensus 399 ~~lV----l~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~-~~~~~~~~g~I~ 473 (709)
T COG2274 399 AILV----LEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT-LIHLPKLQGEIE 473 (709)
T ss_pred HHHH----hcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-cccccccCceEE
Confidence 1110 13456788888888889999999999999999999999999999999999998643322 344567789999
Q ss_pred EEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEe
Q 000503 1225 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP 1304 (1459)
Q Consensus 1225 f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~Vp 1304 (1459)
|+||+|+|+++.+++|+|+||+|+|||+|||||+||||||||+++|.|+|+|++|+|++||+|+++++++.+|++|+|||
T Consensus 474 ~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~ 553 (709)
T COG2274 474 FENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVL 553 (709)
T ss_pred EEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEc
Confidence 99999999998889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCccHHHhcCcCCCC-ChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000503 1305 QSPFLFEGSLRDNLDPFHMN-DDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1381 (1459)
Q Consensus 1305 Qdp~lf~gTIReNLdp~~~~-~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1381 (1459)
||+++|+||||||+..+++. +|||+++|++.+|++++|.++ ||||.++|+|.||||||||||+||||++++|+||||
T Consensus 554 Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlL 633 (709)
T COG2274 554 QDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLL 633 (709)
T ss_pred ccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEE
Confidence 99999999999999988765 679999999999999999999 999999999999999999999999999999999999
Q ss_pred eccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000503 1382 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1382 DEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1457 (1459)
||||||||++||+.|.+.|.+..++||+|+||||++++++||||+|||+|+|+|.|+|+||++. +|.|+++++.+
T Consensus 634 DEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~~q 708 (709)
T COG2274 634 DEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred eCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999997 67999999865
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.1e-76 Score=753.71 Aligned_cols=542 Identities=26% Similarity=0.401 Sum_probs=439.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000503 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1459)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1459)
++.++........++++....+... ........+...++++.++..++.+...+...+.+.+...++|.++++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 98 (567)
T COG1132 21 LLLLLSALLSLLLPLLIGRIIDALL--ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLRL 98 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4444445555666666665444321 11112233444455555566667777777777778999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1459)
Q Consensus 986 p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~ 1065 (1459)
|+++|++++.|++++|+++|++.++..+......+...++.+++.++++...+|.+.++++....++......+.+..+.
T Consensus 99 ~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
T COG1132 99 PLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSRK 178 (567)
T ss_pred CHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998887775555556667777777777777766655554444444444445544566
Q ss_pred HHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1459)
Q Consensus 1066 l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1145 (1459)
..+....+.+.+.+.+.|+++|+++||+|+.++...+++.+..+...+...........+.....++..+....+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (567)
T COG1132 179 LSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALGG 258 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667777788999999999999999999999998888888777766665444444433333333333222222111111
Q ss_pred HhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEE
Q 000503 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1225 (1459)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1225 (1459)
... ..+..+.|.+...+.+...+..++..+...+..++....+.+|+.++.+.+++...+.. +.++..|.|+|
T Consensus 259 ~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~---~~~~~~~~I~f 331 (567)
T COG1132 259 FLV----LSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPD---PLKDTIGSIEF 331 (567)
T ss_pred HHH----HcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC---CCCCCCCeEEE
Confidence 110 12335688899999999999999999999999999999999999999998665322111 13456788999
Q ss_pred EEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000503 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1459)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1459)
+||+|+|++ .+++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|.|||+||++++.+++|++|++|||
T Consensus 332 ~~vsf~y~~-~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Q 410 (567)
T COG1132 332 ENVSFSYPG-KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQ 410 (567)
T ss_pred EEEEEEcCC-CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcc
Confidence 999999975 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000503 1306 SPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1459)
Q Consensus 1306 dp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1459)
||+||+|||||||+++++ .+|||+++|++.++++|+++++ |+||.+||+|.+||||||||+|||||++++|+|||||
T Consensus 411 d~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILD 490 (567)
T COG1132 411 DPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILD 490 (567)
T ss_pred cceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999999999987 6999999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000503 1383 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1458 (1459)
Q Consensus 1383 EaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1458 (1459)
||||++|++||+.|++.+++..+++|+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.|++||+.++
T Consensus 491 EaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~~ 565 (567)
T COG1132 491 EATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQG 565 (567)
T ss_pred ccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHhh
Confidence 999999999999999999988889999999999999999999999999999999999999997 679999998765
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.7e-76 Score=749.39 Aligned_cols=563 Identities=19% Similarity=0.246 Sum_probs=436.8
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 889 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 967 (1459)
Q Consensus 889 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 967 (1459)
++.|.+...+..+. .+++.++...+....++.+.+..+.... .........+..+++++.++..++.+++.+.....+
T Consensus 13 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (588)
T PRK11174 13 LKQQSKPAKRWLNL-SILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAG 91 (588)
T ss_pred HHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455544333322 2244445555555666666655543110 011111223444555566667777888888888899
Q ss_pred HHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHH
Q 000503 968 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1047 (1459)
Q Consensus 968 ~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p 1047 (1459)
.+...+++.++++++++.|..+|++.++|++++|+++|++.+++.+...+..++..++..++.++++.+.+|.+.++++.
T Consensus 92 ~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 171 (588)
T PRK11174 92 QHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLG 171 (588)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888777777777777777777777777766554443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1048 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1127 (1459)
Q Consensus 1048 l~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 1127 (1459)
...+...+...+.+..++..+...+..+.+.+.+.|.++|+++||+|++|+++.+++.+..++..+..........+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (588)
T PRK11174 172 TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSA 251 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444445555555566677889999999999999999999999999999888887776655544444444
Q ss_pred HHHHHHHHHHHHHH-HHHHHhhcCCCCCCC----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 000503 1128 RLQLLAAFIISFIA-TMAVIGSRGNLPATF----STPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1202 (1459)
Q Consensus 1128 ~l~~~~~~~~~~~~-~~~v~~~~~~~~~~~----~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~ 1202 (1459)
...++..+.+.++. ...... .+....+. .+.....+++.++..+..++..+...+.++..+..+.+|+.++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 330 (588)
T PRK11174 252 VLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLET 330 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 43333332221111 111111 11111111 1222333344566677888999999999999999999999999987
Q ss_pred CccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEE
Q 000503 1203 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1282 (1459)
Q Consensus 1203 ~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~ 1282 (1459)
++++...... +.+.+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||+++|+|++ |++|+|.
T Consensus 331 ~~~~~~~~~~-~~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~ 407 (588)
T PRK11174 331 PLAHPQQGEK-ELASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLK 407 (588)
T ss_pred CCcccCCCcc-ccCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEE
Confidence 6643211111 1111234679999999887654 57999999999999999999999999999999999999 9999999
Q ss_pred ECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCC
Q 000503 1283 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFS 1359 (1459)
Q Consensus 1283 IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LS 1359 (1459)
+||+|+++++.+++|++|+||||||++|+|||||||.+++ +.+|+|+++|++.|+++++++++ |+||.+||+|.+||
T Consensus 408 i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LS 487 (588)
T PRK11174 408 INGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLS 487 (588)
T ss_pred ECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCC
Confidence 9999999999999999999999999999999999999885 47999999999999999999999 99999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecCh
Q 000503 1360 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNP 1439 (1459)
Q Consensus 1360 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p 1439 (1459)
|||||||+||||++++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|
T Consensus 488 GGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G~~ 567 (588)
T PRK11174 488 VGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQGDY 567 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecCCH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred hHHhccCCcHHHHHHHhh
Q 000503 1440 QTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1440 ~eLl~~~~~~f~~l~~~~ 1457 (1459)
+||++++ +.|+++++.+
T Consensus 568 ~eL~~~~-~~y~~l~~~q 584 (588)
T PRK11174 568 AELSQAG-GLFATLLAHR 584 (588)
T ss_pred HHHHhcc-hHHHHHHHHh
Confidence 9999864 6999999765
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.3e-75 Score=755.85 Aligned_cols=540 Identities=26% Similarity=0.371 Sum_probs=437.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 903 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 982 (1459)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 982 (1459)
..+++.++........+++.+...+..............+.+++++.++..++.+++.+.+.+.+.+...++|+++++++
T Consensus 165 ~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~l 244 (711)
T TIGR00958 165 SAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLRIREDLFRSL 244 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345555666666677777666653221111111222344455556667777888888889999999999999999999
Q ss_pred hcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 983 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1062 (1459)
Q Consensus 983 l~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~ 1062 (1459)
++.|+.||+++++|+++||+++|++.+++.+...+..++..++.+++.++++.+.+|.+.++++....+...+.+.+.+.
T Consensus 245 l~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~~~ 324 (711)
T TIGR00958 245 LRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKVFGKR 324 (711)
T ss_pred HcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888888888888888888888888877655444444444444445444
Q ss_pred HHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q 000503 1063 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS---LWLSLRLQLLAAFIISF 1139 (1459)
Q Consensus 1063 sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~wl~~~l~~~~~~~~~~ 1139 (1459)
.++..+...+..+...+++.|+++|+++||+|++|+++.+++.+..++..+......... .|....+..+..+++..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 404 (711)
T TIGR00958 325 YQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQVLVLY 404 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444445566677899999999999999999999999999998888776655443322 23322222222222221
Q ss_pred HHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCC
Q 000503 1140 IATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPF 1219 (1459)
Q Consensus 1140 ~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~ 1219 (1459)
+....+. .+..+.|.+..++.|...+..++..+...+.++.++..+.+|+.++++.+++...... ..+++.
T Consensus 405 ~g~~lv~-------~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~ 475 (711)
T TIGR00958 405 YGGQLVL-------TGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGT--LAPLNL 475 (711)
T ss_pred HHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CCCCCC
Confidence 1111121 3456788888899999999999999999999999999999999999987665422111 122455
Q ss_pred CccEEEEEEEEEecCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhc
Q 000503 1220 QGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRG 1298 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~ 1298 (1459)
+|.|+|+||+|+|+++ .+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|+
T Consensus 476 ~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~ 555 (711)
T TIGR00958 476 EGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHR 555 (711)
T ss_pred CCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHh
Confidence 7889999999999753 357999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEeCCCcCCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1299 RFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1299 ~i~~VpQdp~lf~gTIReNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
+|+||||||++|+|||||||.++. ..+|+++++++++++++++++++ |+||.+||+|.+||||||||++||||++++
T Consensus 556 ~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~ 635 (711)
T TIGR00958 556 QVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRK 635 (711)
T ss_pred hceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999774 46889999999999999999998 999999999999999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1454 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1454 (1459)
|+|||||||||+||++||+.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+||++++ |.|++|+
T Consensus 636 p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~-~~y~~lv 711 (711)
T TIGR00958 636 PRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQ-GCYKHLV 711 (711)
T ss_pred CCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCC-CchHhcC
Confidence 99999999999999999999999 3445799999999999999999999999999999999999999864 6898874
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.1e-74 Score=750.54 Aligned_cols=541 Identities=21% Similarity=0.245 Sum_probs=437.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000503 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1459)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1459)
+..++........++......|..-..........+..+++++.++..++.+++.+.....+.+...+++..+++++++.
T Consensus 143 ~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~ 222 (686)
T TIGR03797 143 AMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRLLRL 222 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44445555556666666655553211111111222344555566677788888899999999999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1459)
Q Consensus 986 p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~ 1065 (1459)
|+.||++.++|++++|++ |++.+.+.+...+...+..+..+++.++++.+.+|++.++++...+++..+.....+..+.
T Consensus 223 ~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~ 301 (686)
T TIGR03797 223 PVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLLQVR 301 (686)
T ss_pred CHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 7888888777766666666655666666667777766655444333333333333333333
Q ss_pred HHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1459)
Q Consensus 1066 l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1145 (1459)
..+...+..+...+++.|+++|+.+||+++.|+++.+++.+..++..+..+.....+.|.......+..+...++..+..
T Consensus 302 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~ 381 (686)
T TIGR03797 302 KERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFAAAI 381 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333445566789999999999999999999999999999999988888887777777666555544332222211111
Q ss_pred HhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEE
Q 000503 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1225 (1459)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1225 (1459)
... ..+..+.|.+..+..+...+..++..+...+.++.....+.+|+.++++.++|...... ...+..|.|+|
T Consensus 382 ~lv----~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~---~~~~~~~~I~~ 454 (686)
T TIGR03797 382 SLL----GGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAKT---DPGKLSGAIEV 454 (686)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcC---CCCCCCceEEE
Confidence 110 12445788888888888899999999999999999999999999999987766422111 11234578999
Q ss_pred EEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000503 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1459)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1459)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|+++++|||
T Consensus 455 ~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q 534 (686)
T TIGR03797 455 DRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQ 534 (686)
T ss_pred EEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEcc
Confidence 99999997666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000503 1306 SPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1383 (1459)
Q Consensus 1306 dp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDE 1383 (1459)
||++|+|||||||.++++.+|++++++++.++++++++++ |+||.+||+|.+|||||||||+||||++++|+||||||
T Consensus 535 ~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDE 614 (686)
T TIGR03797 535 NGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDE 614 (686)
T ss_pred CCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 9999999999999988778999999999999999999998 99999999999999999999999999999999999999
Q ss_pred cCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000503 1384 CTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1384 aTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1457 (1459)
|||+||++||+.+++.|++. ++|+|+||||++++..||||+||++|+|+|.|+|+||+++ +|.|++|++.+
T Consensus 615 pTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y~~l~~~q 685 (686)
T TIGR03797 615 ATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLFAQLARRQ 685 (686)
T ss_pred CccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHHHHHHHhc
Confidence 99999999999999999876 6899999999999999999999999999999999999985 57999998753
No 15
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.7e-74 Score=750.46 Aligned_cols=541 Identities=22% Similarity=0.308 Sum_probs=440.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000503 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1459)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1459)
+..++..+.....+++.+...|.............+..+++++.++..++.+++.++....+.+...+++.++++++++.
T Consensus 161 ~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l 240 (710)
T TIGR03796 161 LAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRL 240 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33444455555566666665553211111111223344555566677788888999999999999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1459)
Q Consensus 986 p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~ 1065 (1459)
|++||++.++|++++|++.| ..+.+.+...+...+..++.+++.++++.+.+|+++++++...+++..+...+.+..+.
T Consensus 241 ~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~ 319 (710)
T TIGR03796 241 PVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVD 319 (710)
T ss_pred CHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 56777777777777777777777777777888877666555554444444444444444
Q ss_pred HHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1459)
Q Consensus 1066 l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1145 (1459)
..+......+...+++.|+++|+.+||++++|+.+.+++.+..++..+..+.......|.......+..+...++..+..
T Consensus 320 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~ 399 (710)
T TIGR03796 320 ANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGG 399 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556677889999999999999999999999999998888887777766666666555555444332222211111
Q ss_pred HhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccC----C-CCCCCCCCC
Q 000503 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGY----Q-SLSPDWPFQ 1220 (1459)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~----~-~~~~~wp~~ 1220 (1459)
... ..+..+.|.+..+..+...+..++..+...+.++.....+.+|+.++++.++|..... . ...+.++..
T Consensus 400 ~~v----~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~ 475 (710)
T TIGR03796 400 LRV----MEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLS 475 (710)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCC
Confidence 100 1244678888888889999999999999999999999999999999998877643221 0 011113456
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|+++
T Consensus 476 ~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i 555 (710)
T TIGR03796 476 GYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSV 555 (710)
T ss_pred CeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhhe
Confidence 88999999999987667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcCCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1301 AVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1301 ~~VpQdp~lf~gTIReNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
+||||||++|+|||||||.+++ ..+|++++++++.++++++++++ |+||.++|+|.+|||||||||+||||++++|+
T Consensus 556 ~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~ 635 (710)
T TIGR03796 556 AMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPS 635 (710)
T ss_pred eEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCC
Confidence 9999999999999999998875 46899999999999999999998 99999999999999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1454 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1454 (1459)
|||||||||+||++||+.|.+.|++ .++|+|+||||++++..||||+||++|+|+|.|+|+||+++ ++.|++|+
T Consensus 636 iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 636 ILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred EEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHHHc-CCcHHHHh
Confidence 9999999999999999999999987 58999999999999999999999999999999999999986 56899987
No 16
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=7.4e-74 Score=745.45 Aligned_cols=557 Identities=25% Similarity=0.340 Sum_probs=438.8
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 886 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 965 (1459)
Q Consensus 886 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 965 (1459)
+..++.|++...+.+ ...++..++..+.....+++++.+.|.............+..+++++.++..++.+++.++...
T Consensus 144 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (708)
T TIGR01193 144 LLKFIPLITRQKKLI-VNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNV 222 (708)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444554333322 2233444555566666777887777643211111112223334455556677788888888899
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHH
Q 000503 966 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1045 (1459)
Q Consensus 966 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1045 (1459)
.+.+...+++.++++++++.|+.||++.++|++++|++ |.+.+.+.+...+...+..++.+++.++++.+.+|++++++
T Consensus 223 ~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 301 (708)
T TIGR01193 223 LGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLS 301 (708)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999998 88877776655555555555555555556666666655544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1046 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1125 (1459)
Q Consensus 1046 ~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl 1125 (1459)
+...+++..+...+.+..++..+......+...+++.|+++|+.+||+||.|+.+.+++.+..+...+..+.......+.
T Consensus 302 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (708)
T TIGR01193 302 LLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQ 381 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43333333333444444455555555566778889999999999999999999999999888887777766554444333
Q ss_pred HHHHHHHHH---HHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 000503 1126 SLRLQLLAA---FIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1202 (1459)
Q Consensus 1126 ~~~l~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~ 1202 (1459)
.....++.. +++..++...+. .+..+.|.+..+..+...+..++..+...+.++.....+.+|+.++++.
T Consensus 382 ~~~~~~~~~~~~i~il~~g~~lv~-------~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 454 (708)
T TIGR01193 382 QAIKAVTKLILNVVILWTGAYLVM-------RGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLV 454 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333222222 222222222221 3456788888888999999999999999999999999999999999988
Q ss_pred CccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEE
Q 000503 1203 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1282 (1459)
Q Consensus 1203 ~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~ 1282 (1459)
++|..... ...+.++..|.|+|+||+|+|+++ +++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|+
T Consensus 455 ~~e~~~~~-~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~ 532 (708)
T TIGR01193 455 DSEFINKK-KRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEIL 532 (708)
T ss_pred CCcccccc-cccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEE
Confidence 77653221 111234557899999999999643 5799999999999999999999999999999999999999999999
Q ss_pred ECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcC--CCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCC
Q 000503 1283 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF--HMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISF 1358 (1459)
Q Consensus 1283 IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~--~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~L 1358 (1459)
+||+|+++++.+++|++++||||||++|+|||||||.++ ...+|++++++++.++++++++++ |+||.++|+|.+|
T Consensus 533 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~L 612 (708)
T TIGR01193 533 LNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSI 612 (708)
T ss_pred ECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCC
Confidence 999999999999999999999999999999999999987 346899999999999999999998 9999999999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecC
Q 000503 1359 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGN 1438 (1459)
Q Consensus 1359 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~ 1438 (1459)
||||||||+||||++++|+|||||||||+||++||+.+++.|++. +++|+|+||||++++..||+|+||++|+++|.|+
T Consensus 613 SgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~ 691 (708)
T TIGR01193 613 SGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGS 691 (708)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECC
Confidence 999999999999999999999999999999999999999999874 7899999999999999999999999999999999
Q ss_pred hhHHhccCCcHHHHHHH
Q 000503 1439 PQTLLQDECSVFSSFVR 1455 (1459)
Q Consensus 1439 p~eLl~~~~~~f~~l~~ 1455 (1459)
|+||+++ +|.|++|++
T Consensus 692 ~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 692 HDELLDR-NGFYASLIH 707 (708)
T ss_pred HHHHHhc-CCcHHHHhh
Confidence 9999986 579999986
No 17
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.8e-73 Score=725.51 Aligned_cols=543 Identities=24% Similarity=0.349 Sum_probs=432.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 904 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYST--SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTK 981 (1459)
Q Consensus 904 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~--~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~ 981 (1459)
.+++.++........++++.+..+........... ..++.+++++.++..++.+.+.+.....+.+...+++.+++++
T Consensus 28 ~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 107 (592)
T PRK10790 28 AVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDA 107 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555666666777777766632111111110 1112234444455666777777888888999999999999999
Q ss_pred HhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 982 IVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRS 1061 (1459)
Q Consensus 982 vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~ 1061 (1459)
+++.|.++|++.+.|++++|+++|++.+++.+...+..++..+..+++.++++.+.+|++.++++..+.+...+...+.+
T Consensus 108 l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~ 187 (592)
T PRK10790 108 ALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQR 187 (592)
T ss_pred HHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888888888777777777777777776554332222222222222333
Q ss_pred HHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000503 1062 TSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL-SLRLQLLAAFIISFI 1140 (1459)
Q Consensus 1062 ~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl-~~~l~~~~~~~~~~~ 1140 (1459)
..+...+......+....++.|+++|+.+||+|+.|+++.+++.+..+...+..+.....+.+. .....++..+...++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (592)
T PRK10790 188 YSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGL 267 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334456677899999999999999999999999999888777666655444333322 222222222211111
Q ss_pred HHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCC
Q 000503 1141 ATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQ 1220 (1459)
Q Consensus 1141 ~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~ 1220 (1459)
.+. .+. ...+..+.|.+..++.+...+..++..+...+.++++...+.+|+.++++.++++.... ..++..
T Consensus 268 ~~~--~~~---~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~----~~~~~~ 338 (592)
T PRK10790 268 LML--FGF---SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGND----DRPLQS 338 (592)
T ss_pred HHH--HHH---HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCC----ccCCCC
Confidence 111 111 11345678888888899999999999999999999999999999999998765432111 123345
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
+.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++++++|++|
T Consensus 339 ~~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i 417 (592)
T PRK10790 339 GRIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGV 417 (592)
T ss_pred CeEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhhe
Confidence 789999999999754 5699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1301 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1301 ~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||||||.+|+||||+||.+++..+|++++++++++|++++++.+ |+||.++|+|.+||||||||++||||++++|+|
T Consensus 418 ~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~i 497 (592)
T PRK10790 418 AMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQI 497 (592)
T ss_pred EEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCE
Confidence 999999999999999999999888999999999999999999999 999999999999999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000503 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1457 (1459)
||||||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|+||++++ +.|++|++.+
T Consensus 498 lllDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~-~~y~~l~~~~ 575 (592)
T PRK10790 498 LILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQ-GRYWQMYQLQ 575 (592)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCC-CHHHHHHHHH
Confidence 99999999999999999999999988899999999999999999999999999999999999999875 6999998754
No 18
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.6e-73 Score=724.37 Aligned_cols=544 Identities=25% Similarity=0.356 Sum_probs=442.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000503 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1459)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1459)
++.++...+....+++++...+.............+...++++.++..++.+++.+.....+.+....++..+++++++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 111 (582)
T PRK11176 32 VALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGM 111 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33444444445556666655543211111111112222334455666777777777788888899999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1459)
Q Consensus 986 p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~ 1065 (1459)
|..+|++.+.|++++|+++|++.+.+.+...+..++..++.+++.++++.+.+|+++++++..+++...+.....+..++
T Consensus 112 ~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~ 191 (582)
T PRK11176 112 PVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRN 191 (582)
T ss_pred CHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888888888888888887777777776655544444444444444444444
Q ss_pred HHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1459)
Q Consensus 1066 l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1145 (1459)
..+......+.+.+++.|.++|+.+||+|+.|+.+.+++.+..+...+..........|.....+.+..+...++..+..
T Consensus 192 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~ 271 (582)
T PRK11176 192 ISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAAS 271 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444556677889999999999999999999999999999999988888777666666666555554433222221111
Q ss_pred HhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEE
Q 000503 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1225 (1459)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1225 (1459)
+.. ..+..+.|.+..++.+...+..++..+...+.++.....+.+|+.++.+.+++...+.. ...|..+.|+|
T Consensus 272 ~~~----~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~---~~~~~~~~i~~ 344 (582)
T PRK11176 272 FPS----VMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR---VIERAKGDIEF 344 (582)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc---CCCCCCCeEEE
Confidence 100 12456788888888898999999999999999999999999999999987655322111 11244568999
Q ss_pred EEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000503 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1459)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1459)
+||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++||||
T Consensus 345 ~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 424 (582)
T PRK11176 345 RNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQ 424 (582)
T ss_pred EEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEcc
Confidence 99999998666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCccHHHhcCcCC--CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000503 1306 SPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1381 (1459)
Q Consensus 1306 dp~lf~gTIReNLdp~~--~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1381 (1459)
||++|+|||||||..+. .++|++++++++.++++++++++ |+||.+||+|.+|||||||||+||||++++|+||||
T Consensus 425 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ilil 504 (582)
T PRK11176 425 NVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILIL 504 (582)
T ss_pred CceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 99999999999998763 36899999999999999999999 999999999999999999999999999999999999
Q ss_pred eccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000503 1382 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1382 DEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1457 (1459)
|||||+||++|++.+.+.|++..+++|+|+||||+++++.||+|++|++|+|+|.|+|++|++++ +.|++|++.+
T Consensus 505 DEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~-~~y~~l~~~~ 579 (582)
T PRK11176 505 DEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQN-GVYAQLHKMQ 579 (582)
T ss_pred ECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCC-ChHHHHHHHH
Confidence 99999999999999999999988899999999999999999999999999999999999999865 6999998753
No 19
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.3e-73 Score=667.31 Aligned_cols=513 Identities=24% Similarity=0.342 Sum_probs=437.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHH
Q 000503 937 STSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFI 1016 (1459)
Q Consensus 937 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~ 1016 (1459)
....+++.++++.++..++.+.+.......+.++...+|..+++++.+.+..+-++.|+|++....+..++.++..+...
T Consensus 38 ~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ry 117 (559)
T COG4988 38 SLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARY 117 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 34456667777778888888888888888999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhHHHhhhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHh
Q 000503 1017 LNILLANFVGLLGIAVVLSYVQVF---FLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRA 1093 (1459)
Q Consensus 1017 l~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIra 1093 (1459)
+.....+.+..+.+++.+.+.+|. ++++..|++.++..+...- .+...+..-.+...+.+||.|.+.|+.|+|+
T Consensus 118 LPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~---a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~ 194 (559)
T COG4988 118 LPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLA---AKDASEKQFSALARLSGHFLDRLRGLETLRA 194 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 888888877777776666666554 4555666666554432211 1111122233445677999999999999999
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHH
Q 000503 1094 FKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIV 1173 (1459)
Q Consensus 1094 f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~ 1173 (1459)
|+..+...+++.+..++..+..+....++.-.+..+|++..+.+.++++...+..-+. +..+....-+++..+-.+.
T Consensus 195 f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~---G~ltl~~~l~~LiLAPEff 271 (559)
T COG4988 195 FGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGE---GDLTLFAGLFVLILAPEFF 271 (559)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---CCccHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999999998999999998877766665544332211 2334444455566677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEE
Q 000503 1174 SLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQV 1253 (1459)
Q Consensus 1174 ~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~Gekv 1253 (1459)
.++..+-..|........+.+.+..+.+.|.+...........|..+.+++.+|++++|+++. ++++|+||+++|||++
T Consensus 272 ~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~t 350 (559)
T COG4988 272 QPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLT 350 (559)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEE
Confidence 899999999999999999999999999887765333222223344455677779999998664 8999999999999999
Q ss_pred EEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCC-CChHHHHHH
Q 000503 1254 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSV 1332 (1459)
Q Consensus 1254 gIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~-~~d~ei~~a 1332 (1459)
||||+||||||||+++|+|+.+|++|+|.+||+|+.+++.+++|+++++|||+|++|+|||||||.+++. .+|++++++
T Consensus 351 alvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~a 430 (559)
T COG4988 351 ALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAA 430 (559)
T ss_pred EEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998876 689999999
Q ss_pred HHHhcHHHHHHh-CCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEE
Q 000503 1333 LEKCHVKEEVEA-VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVIT 1411 (1459)
Q Consensus 1333 L~~~~l~~~i~~-lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~ 1411 (1459)
++++++.++++. .||||.+||+|.+|||||+||++||||++++++++++|||||+||.|||+.|++.|.+.++++|||+
T Consensus 431 l~~a~l~~~v~~p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~ 510 (559)
T COG4988 431 LDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLV 510 (559)
T ss_pred HHHhcHHHhhcCCCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEE
Confidence 999999999986 5999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000503 1412 IAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1412 IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1457 (1459)
||||++.+.++|+|+|||+|+++|.|+|++|.+++ |.|++|++++
T Consensus 511 itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~-~~y~~l~~~q 555 (559)
T COG4988 511 ITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQ-GLYANLLKQQ 555 (559)
T ss_pred EEcChHHHhcCCEEEEecCCceeccCCHHHHhhcC-cHHHHHHHHH
Confidence 99999999999999999999999999999999865 6999999864
No 20
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.4e-72 Score=731.93 Aligned_cols=533 Identities=24% Similarity=0.320 Sum_probs=428.3
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000503 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1459)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1459)
++.++........++.++...|.............+..+++++.++..++.+++.++....+.+...+++..+++++++.
T Consensus 154 ~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l 233 (694)
T TIGR03375 154 IASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKKADLILSAKLFERVLGL 233 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 34444555566667777666653211111111122333444455667778888889999999999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1459)
Q Consensus 986 p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~ 1065 (1459)
|+.| ++.++|++++|+ +|++.+.+.+...+...+..++.+++.++++.+.+|+++++.+..+.++..+..++.+..++
T Consensus 234 ~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 311 (694)
T TIGR03375 234 RMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQRPLSR 311 (694)
T ss_pred Cccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 788999999999 79999998887776666666666666666666777766554443333333333334444444
Q ss_pred HHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1459)
Q Consensus 1066 l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1145 (1459)
..+...+..+...+++.|+++|+++||+|++|+.+.+++.+..++..+..+.....+.+.....+.+..+...++..+..
T Consensus 312 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~ 391 (694)
T TIGR03375 312 LAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGV 391 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444556677889999999999999999999999999999888887777766555555444444433322111111111
Q ss_pred HhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEE
Q 000503 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1225 (1459)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1225 (1459)
... ..+..+.|.+..++.+...+..++..+...+.++.....+.+|+.++++.++|...... .....+..|.|+|
T Consensus 392 ~~v----~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~-~~~~~~~~~~I~~ 466 (694)
T TIGR03375 392 YLI----SDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTR-FLHRPRLQGEIEF 466 (694)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-CCCCCCccceEEE
Confidence 100 12456788888889999999999999999999999999999999999988776432111 1111234678999
Q ss_pred EEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000503 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1459)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1459)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++++||||
T Consensus 467 ~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q 546 (694)
T TIGR03375 467 RNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQ 546 (694)
T ss_pred EEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECC
Confidence 99999997666679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000503 1306 SPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1459)
Q Consensus 1306 dp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1459)
||++|+|||||||.++++ .+|++++++++.++++++++++ |+||.+||+|.+|||||||||+||||++++|+|+|||
T Consensus 547 ~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLD 626 (694)
T TIGR03375 547 DPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLD 626 (694)
T ss_pred ChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999999998865 7899999999999999999998 9999999999999999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhcc
Q 000503 1383 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1383 EaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
||||+||++||+.|++.|++..+++|+|+||||++++..||+|+||++|+++|.|+|+||+++
T Consensus 627 E~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 627 EPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 999999999999999999998899999999999999999999999999999999999999875
No 21
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-74 Score=725.91 Aligned_cols=516 Identities=23% Similarity=0.303 Sum_probs=418.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHH
Q 000503 937 STSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFI 1016 (1459)
Q Consensus 937 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~ 1016 (1459)
....+...|+.+++...+..++...++.+.+.|...++|.+.+++++|+++.|||.+..|++..|++.|++.+.+.+...
T Consensus 69 ~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geK 148 (1228)
T KOG0055|consen 69 EVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEK 148 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHH
Confidence 44566777777888888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCc
Q 000503 1017 LNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKS 1096 (1459)
Q Consensus 1017 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~ 1096 (1459)
+..++..+...++.+++.++..|.+.+++++...+.......+.+..-.....+..+.+.--+...|++.+++|+.+|+-
T Consensus 149 vg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~g 228 (1228)
T KOG0055|consen 149 VGNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNG 228 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcC
Confidence 99999888888888888777777766554443333222222222222222222333334445678899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 000503 1097 EDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLL 1176 (1459)
Q Consensus 1097 e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l 1176 (1459)
|+...++|.+.++...|...... .|.++.....-.++.+..+....++... ......++|.+..++...+.-...+
T Consensus 229 q~~e~~ry~~~L~~~~k~gi~~g---~~~G~~~G~~~~~~~~~~a~~~WyG~~l-i~~~~~~~g~v~~v~~~vl~g~~sL 304 (1228)
T KOG0055|consen 229 EKKEIERYSKALENALKFGIKKG---LFKGLGLGFTFFLLFASYALAFWYGSTL-ILNGGYNGGDVITVFFSVLIGGMSL 304 (1228)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCceEEEEEeehhhhhhhh
Confidence 99999999999988887765432 3333333222222222222222222110 0112334555555555555555566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCC-CccceeeeEEEeCCcEEEE
Q 000503 1177 GNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFTIEGGTQVGI 1255 (1459)
Q Consensus 1177 ~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~-~~vL~~isl~I~~GekvgI 1255 (1459)
+.....+..+.++..|..++.+.++..++..............+|.|+|+||+|+|+... .++|+|+||+|++||.||+
T Consensus 305 gqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~val 384 (1228)
T KOG0055|consen 305 GQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVAL 384 (1228)
T ss_pred hccccchHHHhccccchHHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEE
Confidence 777777888888999999999998765543211111112223579999999999997542 3799999999999999999
Q ss_pred ECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCC-CChHHHHHHHH
Q 000503 1256 VGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLE 1334 (1459)
Q Consensus 1256 vGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~-~~d~ei~~aL~ 1334 (1459)
||+|||||||++++|.|+|+|++|+|+|||.|+.+++.++||++||+|.|||+||++||+|||.++.+ .+++|+.+|++
T Consensus 385 VG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k 464 (1228)
T KOG0055|consen 385 VGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAK 464 (1228)
T ss_pred ECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999874 58999999999
Q ss_pred HhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 000503 1335 KCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITI 1412 (1459)
Q Consensus 1335 ~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~I 1412 (1459)
.++.++++..+ |+||.+||+|.+||||||||+||||||+|+|+|||||||||+||+++|+.+|++|++..+|+|.|+|
T Consensus 465 ~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivV 544 (1228)
T KOG0055|consen 465 AANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVV 544 (1228)
T ss_pred HccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEE
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000503 1413 AHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1413 aHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1457 (1459)
||||+||+++|+|+||++|+|+|.|+|+||++++ |.|++|++.+
T Consensus 545 aHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q 588 (1228)
T KOG0055|consen 545 AHRLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQ 588 (1228)
T ss_pred eeehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHH
Confidence 9999999999999999999999999999999987 8999999765
No 22
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-72 Score=650.22 Aligned_cols=499 Identities=22% Similarity=0.350 Sum_probs=419.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhH
Q 000503 948 FCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGL 1027 (1459)
Q Consensus 948 l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~ 1027 (1459)
+++...+..++..+.......+.-.++|.++|+++...+..-..+...|+++||+..|++.+|+.+-..+...+..+...
T Consensus 67 ~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~ 146 (573)
T COG4987 67 LAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLI 146 (573)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHH
Confidence 44555555565555666678888899999999999999999999999999999999999999999999999888888888
Q ss_pred HHhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHH
Q 000503 1028 LGIAVVLSYVQVFFLLLLVPF-WFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1106 (1459)
Q Consensus 1028 l~~~~~~~~~~~~~~~~~~pl-~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~ 1106 (1459)
++..+.+++.+|++++.+... .+....+...+.+..|...+.-...+..++++|.|.+.|....+.||.++.|.+.+.+
T Consensus 147 ~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~ 226 (573)
T COG4987 147 AVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEA 226 (573)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHH
Confidence 888888888887766544333 3333334444555556666666678889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000503 1107 HVVLYQRTSYSELTASLWLSLRLQLLAAFIIS-FIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFL-SSFT 1184 (1459)
Q Consensus 1107 ~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~-~~~~ 1184 (1459)
..+.+.+.......+..|....+.++.++.+. .+..++.....+ ..+.-...+++..++.....+..+. ..+.
T Consensus 227 ~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G-----~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~ 301 (573)
T COG4987 227 TEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAG-----ALAQPGAALALLVIFAALEAFEPLAPGAFQ 301 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCC-----CcchhHHHHHHHHHHHHHHHHhhhcchhHH
Confidence 99999999999999999999988888876655 333333311111 1111122222222233444444444 6667
Q ss_pred HHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHH
Q 000503 1185 ETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKS 1264 (1459)
Q Consensus 1185 ~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKS 1264 (1459)
++.....|++|+.+..+.++|...+....+ -+.+ .++++||+|+|+++.+++|+|+||++++||||||+||||||||
T Consensus 302 ~lgq~~~Sa~Rl~~i~~q~~e~~~~~~~~~--~~~~-~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKS 378 (573)
T COG4987 302 HLGQVIASARRLNDILDQKPEVTFPDEQTA--TTGQ-ALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKS 378 (573)
T ss_pred HhhHHHHHHHHHhhhccCCcccCCCccccC--Cccc-eeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHH
Confidence 888899999999999988777533211111 1122 7999999999998888999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHH
Q 000503 1265 SILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVE 1343 (1459)
Q Consensus 1265 TLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~ 1343 (1459)
|++++|.|.++|++|+|..+|.+++.++.+++|+.|++++|.+.+|+||+|+||...++ .+|||+|++|+++||.+.++
T Consensus 379 TllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 379 TLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987654 59999999999999999999
Q ss_pred hC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh
Q 000503 1344 AV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN 1421 (1459)
Q Consensus 1344 ~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~ 1421 (1459)
+. ||+|.+||+|.+||||||||++|||+||++.++++|||||.+||++||+.|.+.|.+..+|+|+|+||||+..+..
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~ 538 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLER 538 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhh
Confidence 99 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCeEEEecChhHHhccCCcHHHHHHH
Q 000503 1422 MDEILILDHGHLVEQGNPQTLLQDECSVFSSFVR 1455 (1459)
Q Consensus 1422 ~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~ 1455 (1459)
||||+|||+|+++|+|+|.+|+++ +|.|++|++
T Consensus 539 ~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q 571 (573)
T COG4987 539 MDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQ 571 (573)
T ss_pred cCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhc
Confidence 999999999999999999999995 579999976
No 23
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.9e-72 Score=708.25 Aligned_cols=504 Identities=22% Similarity=0.300 Sum_probs=414.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHH
Q 000503 945 LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANF 1024 (1459)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~ 1024 (1459)
+.++.++..++.++..+.....+.+...+++.++++++++.|+.+|++.++|++++|+++|++.+++.+...+..++..+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~ 145 (574)
T PRK11160 66 VRGAAIGRTAGRYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAAL 145 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566677777778888889999999999999999999999999999999999999999999999888888888888
Q ss_pred HhHHHhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHH
Q 000503 1025 VGLLGIAVVLSYVQVFFLLLLVPFWF-IYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAK 1103 (1459)
Q Consensus 1025 ~~~l~~~~~~~~~~~~~~~~~~pl~~-~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~ 1103 (1459)
+.+++.++.+++.+|.+.++++..+. ++..+..++.+..+...+...++.+.+.+.+.|.++|+++||+|+.|+++.++
T Consensus 146 ~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~ 225 (574)
T PRK11160 146 VVILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQ 225 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHH
Confidence 88888888888888877654432222 22223333444444444445566777889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000503 1104 FKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYA-APIVSLLGNFLSS 1182 (1459)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~-~~~~~~l~~l~~~ 1182 (1459)
+.+..++..+..+.......+.....+++..+...++..+..... .+..+.|.+..++.|. ......+..+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-----~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~ 300 (574)
T PRK11160 226 LEQTEQQWLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGGV-----GGNAQPGALIALFVFAALAAFEALMPVAGA 300 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888887776666655555555444433222222211111 1233455554444443 3334566677778
Q ss_pred HHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCc
Q 000503 1183 FTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAG 1262 (1459)
Q Consensus 1183 ~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSG 1262 (1459)
+.+......+.+|+.++++.++|........ ..+..+.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||
T Consensus 301 ~~~~~~~~~s~~ri~~ll~~~~~~~~~~~~~--~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsG 378 (574)
T PRK11160 301 FQHLGQVIASARRINEITEQKPEVTFPTTST--AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCG 378 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcccC--CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCC
Confidence 8888899999999999998776532111111 12345789999999999765557999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHH
Q 000503 1263 KSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEE 1341 (1459)
Q Consensus 1263 KSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~-~~~d~ei~~aL~~~~l~~~ 1341 (1459)
||||+++|.|+++|++|+|.+||+|+++++.+++|+++++|||||++|+|||||||.++. ..+|+++++++++++++++
T Consensus 379 KSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~ 458 (574)
T PRK11160 379 KSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKL 458 (574)
T ss_pred HHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHH
Confidence 999999999999999999999999999999999999999999999999999999998765 4689999999999999999
Q ss_pred HHh-CCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHh
Q 000503 1342 VEA-VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL 1420 (1459)
Q Consensus 1342 i~~-lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~ 1420 (1459)
+++ .||||.+||+|.+||||||||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.
T Consensus 459 i~~p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~ 538 (574)
T PRK11160 459 LEDDKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLE 538 (574)
T ss_pred HcCccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHH
Confidence 985 4999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred hcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHh
Q 000503 1421 NMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1456 (1459)
Q Consensus 1421 ~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~ 1456 (1459)
+||+|++|++|+++|.|+|+||+++ +|.|++|++.
T Consensus 539 ~~d~i~~l~~G~i~~~g~~~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 539 QFDRICVMDNGQIIEQGTHQELLAQ-QGRYYQLKQR 573 (574)
T ss_pred hCCEEEEEeCCeEEEeCCHHHHHhc-CcHHHHHHhh
Confidence 9999999999999999999999986 5799999874
No 24
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=9.2e-72 Score=711.67 Aligned_cols=544 Identities=25% Similarity=0.375 Sum_probs=458.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000503 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1459)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1459)
++.++..++..+.+++++...+.............+..+++++.++..++.+++.++....+.+....++..+++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~~ 100 (571)
T TIGR02203 21 VAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLGL 100 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44455555555666666655543211111112233344566777777888888888999999999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1459)
Q Consensus 986 p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~ 1065 (1459)
|.++|++.+.|++++|+++|++.+++.+...+..++..++.+++.++++.+.+|+++++++...++...+...+.+..++
T Consensus 101 ~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~~~ 180 (571)
T TIGR02203 101 PVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRLRR 180 (571)
T ss_pred CHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888888888888888888888888777766666666666666666666
Q ss_pred HHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1459)
Q Consensus 1066 l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1145 (1459)
..+......+...+.+.|+++|+.+||+++.++++.+++.+..+...+..........+.....+++..+...++.+...
T Consensus 181 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 260 (571)
T TIGR02203 181 ISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFIAL 260 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666777888999999999999999999999999999999999988888777776766666555554432222211111
Q ss_pred HhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEE
Q 000503 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1225 (1459)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1225 (1459)
+. ...+..++|.+..++.++..+..++..+...+.++.....+.+|+.++++.+++...... +. -+..+.|++
T Consensus 261 ~~----~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~-~~--~~~~~~i~~ 333 (571)
T TIGR02203 261 FQ----AQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR-AI--ERARGDVEF 333 (571)
T ss_pred HH----HHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-CC--CCCCCeEEE
Confidence 10 013456789899999999999999999999999999999999999999987665422111 11 124578999
Q ss_pred EEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000503 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1459)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1459)
+||+|+|++..+++|+|+||+|+|||+++|+|+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++||||
T Consensus 334 ~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 413 (571)
T TIGR02203 334 RNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQ 413 (571)
T ss_pred EEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEcc
Confidence 99999997655679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCccHHHhcCcCC--CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000503 1306 SPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1381 (1459)
Q Consensus 1306 dp~lf~gTIReNLdp~~--~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1381 (1459)
||++|+|||||||..++ +.+|++++++++++++++++.++ ||||.++|+|.+|||||||||+||||++++|+|++|
T Consensus 414 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illL 493 (571)
T TIGR02203 414 DVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILIL 493 (571)
T ss_pred CcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999875 57899999999999999999998 999999999999999999999999999999999999
Q ss_pred eccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000503 1382 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1382 DEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1457 (1459)
|||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|+++++++ +.|+++++++
T Consensus 494 DEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~-~~~~~~~~~~ 568 (571)
T TIGR02203 494 DEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARN-GLYAQLHNMQ 568 (571)
T ss_pred eCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcC-CHHHHHHHHh
Confidence 99999999999999999999988999999999999999999999999999999999999999864 6899988753
No 25
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=5e-71 Score=693.40 Aligned_cols=543 Identities=23% Similarity=0.280 Sum_probs=471.0
Q ss_pred chHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 268 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 347 (1459)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 347 (1459)
+-++..++-|++.+.-..+..++..+++++.|++.+.++|.+-.+.+......+++++.+..++.+++.....|...+++
T Consensus 143 ~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~ 222 (709)
T COG2274 143 SWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLG 222 (709)
T ss_pred HhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556667778888889999999999999999999999999987777777888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000503 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 425 (1459)
Q Consensus 348 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~ 425 (1459)
.|+...+...+|+|.+++|...++++++|++++.++ |.+.|.+++.. +..+...++-++....| +..-+.-+++++
T Consensus 223 ~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm-~~ys~~L~li~l 300 (709)
T COG2274 223 KRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVM-FLYSWKLTLIVL 300 (709)
T ss_pred HHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 999999999999999999999999999999999886 88888886543 33344455554444434 444444555566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 426 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 505 (1459)
Q Consensus 426 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 505 (1459)
+.+++.+.+..++.+.+++..++.++...++.+.+.|.++||++||..+.|+.+..++++.-.+.++...+.........
T Consensus 301 ~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 380 (709)
T COG2274 301 AAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILN 380 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 66666777788888999999999999999999999999999999999999999999999988888888888777776665
Q ss_pred HHHHHHHHH--HHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhh
Q 000503 506 FFWATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 583 (1459)
Q Consensus 506 ~~~~~~~~~--~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 583 (1459)
.+......+ +.+++||++.+.++.+|.|+++++.++.+.+..|+..+.+.+..+.+++++.+|+.+.++.|...+...
T Consensus 381 ~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~ 460 (709)
T COG2274 381 TIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDK 460 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 554444433 456889999999999999999999999999999999999999999999999999999998765433111
Q ss_pred hhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC
Q 000503 584 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 663 (1459)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~ 663 (1459)
... ......+.|+++|++|+|..+++ ++|+|+||+|++||.++|||+||||||||+|+|+|.++|
T Consensus 461 ~~~-----------~~~~~~g~I~~~nvsf~y~~~~~----~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p 525 (709)
T COG2274 461 TLI-----------HLPKLQGEIEFENVSFRYGPDDP----PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKP 525 (709)
T ss_pred ccc-----------cccccCceEEEEEEEEEeCCCCc----chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 000 01235678999999999986532 359999999999999999999999999999999999999
Q ss_pred CCeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCCCC-HHHHHHHHHHhcchhhHhhccCCCcccccC
Q 000503 664 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYD-PQSYSETLKACTLDVDISLMVGGDMAYIGE 729 (1459)
Q Consensus 664 ~~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~~~-~~~~~~v~~~~~l~~di~~~~~gd~t~ig~ 729 (1459)
++|+|.++| .|+||+|++.+|+|||||||.++.+.. .|+..++++..+.++++..+|.|++|.+||
T Consensus 526 ~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E 605 (709)
T COG2274 526 QQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGE 605 (709)
T ss_pred CCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccccccc
Confidence 999999998 599999999999999999999998754 478888888889999999999999999999
Q ss_pred CCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCC
Q 000503 730 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 809 (1459)
Q Consensus 730 ~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G 809 (1459)
+|.+||||||||++||||++++|+|+||||||||||+++++.|.+++ .. ...++|+|+||||++.++.||+|++|++|
T Consensus 606 ~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L-~~-~~~~~T~I~IaHRl~ti~~adrIiVl~~G 683 (709)
T COG2274 606 GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNL-LQ-ILQGRTVIIIAHRLSTIRSADRIIVLDQG 683 (709)
T ss_pred CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHH-HH-HhcCCeEEEEEccchHhhhccEEEEccCC
Confidence 99999999999999999999999999999999999999999999984 33 56789999999999999999999999999
Q ss_pred eEEEecCHHHHHhccccCcc
Q 000503 810 QVKWIGSSADLAVSLYSGFW 829 (1459)
Q Consensus 810 ~i~~~g~~~~l~~~~~~~~~ 829 (1459)
+|+++|+++|+++..+.+.+
T Consensus 684 kiv~~gs~~ell~~~g~y~~ 703 (709)
T COG2274 684 KIVEQGSHEELLAQGGLYAR 703 (709)
T ss_pred ceeccCCHHHHHHhcChHHH
Confidence 99999999999987665544
No 26
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.7e-71 Score=717.95 Aligned_cols=542 Identities=23% Similarity=0.331 Sum_probs=436.2
Q ss_pred HHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Q 000503 908 AILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPV 987 (1459)
Q Consensus 908 ~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~ 987 (1459)
.++........++.++...|..-..........+..+++++.++..++.+++.++....+.+...+++.++++++++.|+
T Consensus 148 s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 227 (694)
T TIGR01846 148 SLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPL 227 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 33444444555666666555321111111222334455566666778888899999999999999999999999999999
Q ss_pred ccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 988 LFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELR 1067 (1459)
Q Consensus 988 ~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~l~ 1067 (1459)
.||++.++|++++|+ +|++.+.+.+...+...+..++.+++.++++.+.+|.++++++..++++..+.....+..+...
T Consensus 228 ~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~ 306 (694)
T TIGR01846 228 GYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRKRV 306 (694)
T ss_pred HHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 6999999887766666665555555556666777777665544333333333222222222222
Q ss_pred HHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000503 1068 RLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIG 1147 (1459)
Q Consensus 1068 ~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~ 1147 (1459)
+...+..+...+++.|+++|+.+||+||.|+.+.+++.+..++..+..+.....+.+.....+++..+...++..+....
T Consensus 307 ~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~l 386 (694)
T TIGR01846 307 EDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHL 386 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 33334556677999999999999999999999999999999988888777766666666555554443222221111110
Q ss_pred hcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEE
Q 000503 1148 SRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQN 1227 (1459)
Q Consensus 1148 ~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~n 1227 (1459)
. ..+..+.|.+..+..+...+..++..+...+.+++....+.+|+.++++.++|...... .......|.|+|+|
T Consensus 387 v----~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~--~~~~~~~~~i~~~~ 460 (694)
T TIGR01846 387 V----IGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSAGL--AALPELRGAITFEN 460 (694)
T ss_pred H----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCC--CCCCCCCCeEEEEE
Confidence 0 12456788888888899999999999999999999999999999999988776432111 11112357899999
Q ss_pred EEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCC
Q 000503 1228 VTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSP 1307 (1459)
Q Consensus 1228 Vs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp 1307 (1459)
|+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|++||+|+++++.+++|++++||||||
T Consensus 461 vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~ 540 (694)
T TIGR01846 461 IRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQEN 540 (694)
T ss_pred EEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCC
Confidence 99999876667999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecc
Q 000503 1308 FLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDEC 1384 (1459)
Q Consensus 1308 ~lf~gTIReNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEa 1384 (1459)
.+|+|||||||.+++ ..+|++++++++.++++++++++ |+||.++++|.+||||||||++||||++++|+|||||||
T Consensus 541 ~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEp 620 (694)
T TIGR01846 541 VLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEA 620 (694)
T ss_pred eehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 999999999998865 46899999999999999999998 999999999999999999999999999999999999999
Q ss_pred CcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000503 1385 TANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1385 TS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1457 (1459)
||+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|+||++++ |.|++|++.+
T Consensus 621 ts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~~-~~y~~l~~~~ 692 (694)
T TIGR01846 621 TSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQ-GLYARLWQQQ 692 (694)
T ss_pred CcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHcC-ChHHHHHHhh
Confidence 99999999999999999988899999999999999999999999999999999999999864 7999999753
No 27
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.6e-71 Score=663.47 Aligned_cols=540 Identities=20% Similarity=0.221 Sum_probs=443.3
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-GSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 350 (1459)
Q Consensus 272 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1459)
.+.+..||.+..+.++.++.....+.-|.++.+++|.+.. .+....-.-....+..++++.+++...+.+.....+.++
T Consensus 140 ~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv 219 (716)
T KOG0058|consen 140 GLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGERV 219 (716)
T ss_pred HHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556678888888888899999999999999999998876 333222233445666778888899988988889999999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHH
Q 000503 351 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVAL-YLLYTQVKFAFVSGLAIT 428 (1459)
Q Consensus 351 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~p~~i~i~~-~lL~~~lg~a~l~~~~v~ 428 (1459)
-..+...+|++.++...+.+++..+|++++.++.|++.+.+.+ .++.+..-+.++...++ +|++..+.++.+.-+ ++
T Consensus 220 ~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i-~~ 298 (716)
T KOG0058|consen 220 VARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLI-VV 298 (716)
T ss_pred HHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHH-Hh
Confidence 9999999999999999999999999999999999999998754 45666666666654443 444444444444333 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 429 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 508 (1459)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 508 (1459)
.+.+.+..+++++.++..++.+++..+-.+...|.+++||+||+|+.|+...++..+.-++-++..+|......+....+
T Consensus 299 P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~ 378 (716)
T KOG0058|consen 299 PIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGST 378 (716)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHH
Confidence 33344567778888888888888888889999999999999999999998877776654444444444443333332222
Q ss_pred HH--HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhc
Q 000503 509 AT--TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 586 (1459)
Q Consensus 509 ~~--~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 586 (1459)
.. ....++++.+|.|++.++.||++.+.+++.+--.+..++..+...++.++++..+-+|+.+|++.+..-+.. . .
T Consensus 379 ~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~-G-~ 456 (716)
T KOG0058|consen 379 NLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLT-G-T 456 (716)
T ss_pred HHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCC-C-c
Confidence 22 234567788999999999999999999999999999999999999999999999999999999765432211 0 0
Q ss_pred CCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCe
Q 000503 587 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 666 (1459)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G 666 (1459)
..| ....+.|+|+|++|+||.+++ .++|+|+||+|+|||.+|+||||||||||+.++|+.+|+|++|
T Consensus 457 ~~p----------~~~~G~IeF~~VsFaYP~Rp~---~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG 523 (716)
T KOG0058|consen 457 LAP----------DHLQGVIEFEDVSFAYPTRPD---VPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSG 523 (716)
T ss_pred ccc----------ccccceEEEEEeeeecCCCCC---chhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 011 134578999999999998755 4459999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCc
Q 000503 667 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1459)
Q Consensus 667 ~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 732 (1459)
+|.+|| +||+|.|+|.||++||+|||.+|.+ .++|+..++.+.+..++.|..+|+|++|.|||+|.
T Consensus 524 ~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 524 RILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGS 603 (716)
T ss_pred eEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccc
Confidence 999998 5999999999999999999999975 57788999999999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000503 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1459)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~ 812 (1459)
.|||||||||||||||+++|.||||||+|||||++++..+ +.++.. ..+++|||+|+||++.+++||+|+++++|+++
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lV-q~aL~~-~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~ 681 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLV-QEALDR-LMQGRTVLVIAHRLSTVRHADQIVVIDKGRVV 681 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHH-HHHHHH-hhcCCeEEEEehhhhHhhhccEEEEEcCCeEE
Confidence 9999999999999999999999999999999999976654 444543 67789999999999999999999999999999
Q ss_pred EecCHHHHHhcc-ccCcc
Q 000503 813 WIGSSADLAVSL-YSGFW 829 (1459)
Q Consensus 813 ~~g~~~~l~~~~-~~~~~ 829 (1459)
|.|+|+|+++.. +.+.+
T Consensus 682 E~G~h~eLl~~~~gly~~ 699 (716)
T KOG0058|consen 682 EMGTHDELLSKPNGLYAK 699 (716)
T ss_pred ecccHHHHhhCcccHHHH
Confidence 999999999876 34443
No 28
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-73 Score=638.37 Aligned_cols=493 Identities=24% Similarity=0.410 Sum_probs=396.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHH-hh
Q 000503 953 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLG-IA 1031 (1459)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~-~~ 1031 (1459)
+++.-+|+|+......-..+.+.-.+++++....+.|+-...+|+.+.-+.+..+.+. .+.....++.-.+.-+.. .+
T Consensus 273 G~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~v 351 (790)
T KOG0056|consen 273 GFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMV 351 (790)
T ss_pred cchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhh
Confidence 4566677787777888889999999999999999999999999988876666554443 111111111111111111 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHH
Q 000503 1032 VVLSYVQVFFLLLLVPFWFIYSKLQ----FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEH 1107 (1459)
Q Consensus 1032 ~~~~~~~~~~~~~~~pl~~~~~~~~----~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~ 1107 (1459)
-......+|+.+++.....+|..+. ..-.+..|.+...+.+++ +.-.+++-+.+|+|-|+.|++..++|.+.
T Consensus 352 YF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesr----Ar~vDsllNFETVKyy~Ae~yEverYreA 427 (790)
T KOG0056|consen 352 YFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESR----ARQVDSLLNFETVKYYNAEDYEVERYREA 427 (790)
T ss_pred hhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhh----hhhhhhhhcchhhhccCchhhhHHHHHHH
Confidence 2223346777776666555554332 111223333333333433 34578899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1108 VVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETE 1187 (1459)
Q Consensus 1108 ~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e 1187 (1459)
++.+|+..++....-..++..-+.+..+......+++++ .......+.|...+..+|.+++..+++++-..+..++
T Consensus 428 il~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY----~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ 503 (790)
T KOG0056|consen 428 ILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAY----RVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQ 503 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeee----eeeeccccccceehHHHHHHHHhCchHHHHHHHHHHH
Confidence 999999888766554444443333322221111122211 1113345678888999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHH
Q 000503 1188 KEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSIL 1267 (1459)
Q Consensus 1188 ~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl 1267 (1459)
++..-.|++.++++.++|-.+.+..+|- --.+|.|+|+||+|.|+++ +|||+||||+++||+.||+|||||+||||++
T Consensus 504 ~nfiDmEnmfdllkee~eVvd~P~a~pl-~~~~G~i~fsnvtF~Y~p~-k~vl~disF~v~pGktvAlVG~SGaGKSTim 581 (790)
T KOG0056|consen 504 KNFIDMENMFDLLKEEPEVVDLPGAPPL-KVTQGKIEFSNVTFAYDPG-KPVLSDISFTVQPGKTVALVGPSGAGKSTIM 581 (790)
T ss_pred HhhhhHHHHHHHhhcCchhhcCCCCCCc-cccCCeEEEEEeEEecCCC-CceeecceEEecCCcEEEEECCCCCchhHHH
Confidence 9999999999999887775332222222 2357999999999999876 4699999999999999999999999999999
Q ss_pred HHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC-
Q 000503 1268 NALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV- 1345 (1459)
Q Consensus 1268 ~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l- 1345 (1459)
++|+|++|.++|+|+|||+||+++..++||++||+||||.+||++||..||.+... .+|||+.+|.+.++++|.|-++
T Consensus 582 RlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fP 661 (790)
T KOG0056|consen 582 RLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFP 661 (790)
T ss_pred HHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999998764 5899999999999999999998
Q ss_pred -CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCE
Q 000503 1346 -GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDE 1424 (1459)
Q Consensus 1346 -GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~Dr 1424 (1459)
|++|.|||+|-.||||||||+++||++|++|.|++||||||+||..||+.||.++.+..+++|.|+|||||+|+.++|.
T Consensus 662 egY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ 741 (790)
T KOG0056|consen 662 EGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADL 741 (790)
T ss_pred hhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCeEEEecChhHHhccCCcHHHHHHHh
Q 000503 1425 ILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1456 (1459)
Q Consensus 1425 IlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~ 1456 (1459)
|+|+++|+|+|.|+|+||+++++|.|++||+.
T Consensus 742 ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~ 773 (790)
T KOG0056|consen 742 ILVISNGRIVERGRHEELLKRDGGAYADMWQA 773 (790)
T ss_pred EEEEeCCeEeecCcHHHHHhccCCcHHHHHHH
Confidence 99999999999999999999999999999953
No 29
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=8.4e-70 Score=693.62 Aligned_cols=545 Identities=23% Similarity=0.307 Sum_probs=430.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000503 904 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 983 (1459)
Q Consensus 904 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl 983 (1459)
+++..++..++....++++....|.... ......++.+++++.++..+..+...........+....+..+++++++
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~iid~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ 100 (588)
T PRK13657 24 LAVANVLLAAATFAEPILFGRIIDAISG---KGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERII 100 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555556666667777766653221 1112222333333333333334444444444555555667779999999
Q ss_pred cCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 984 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTS 1063 (1459)
Q Consensus 984 ~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~s 1063 (1459)
+.|..+|++.+.|++++|+++|++.+.+.+...+...+..++..++.++++.+.+|+++++++.+.+++..+...+.+..
T Consensus 101 ~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~ 180 (588)
T PRK13657 101 QLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRKT 180 (588)
T ss_pred hCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998877666666666666666666666677777776665555555555666666666
Q ss_pred HHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1064 RELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATM 1143 (1459)
Q Consensus 1064 r~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 1143 (1459)
++..+......+.+.+++.|.++|+.+||+|+.++.+.+++.+..+...+..........+.....+++..+...++.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (588)
T PRK13657 181 KDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILVL 260 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666777888899999999999999999999999999998888877766655555554444443332222221111
Q ss_pred HHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccE
Q 000503 1144 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLI 1223 (1459)
Q Consensus 1144 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I 1223 (1459)
..+.. ..+..+.|.+..++.++..+..++..+...+.++..+..+.+|+.++.+.+++........+. -+..+.|
T Consensus 261 g~~~v----~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~I 335 (588)
T PRK13657 261 GAALV----QKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAIDL-GRVKGAV 335 (588)
T ss_pred HHHHH----HcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCc-CCCCCeE
Confidence 11110 134567888888888989999999999999999999999999999998765442111111111 1234679
Q ss_pred EEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000503 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1459)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1459)
+++||+|+|+++ +++|+|+||+++|||++||+|+||||||||+++|+|+++|++|+|.+||.|+++++.+++|++++||
T Consensus 336 ~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v 414 (588)
T PRK13657 336 EFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVV 414 (588)
T ss_pred EEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999743 5699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcCCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000503 1304 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1380 (1459)
Q Consensus 1304 pQdp~lf~gTIReNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1380 (1459)
||||.+|+|||||||.+++ ..+|++++++++++++.++++++ |+||.++++|.+||||||||++||||++++|+|+|
T Consensus 415 ~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~ili 494 (588)
T PRK13657 415 FQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILI 494 (588)
T ss_pred ecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998875 46899999999999999999998 99999999999999999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000503 1381 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1458 (1459)
Q Consensus 1381 LDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1458 (1459)
||||||+||++|++.|.+.|++..+++|+|+||||+++++.||+|++|++|+++|.|+|++|+++ ++.|++|+++.+
T Consensus 495 LDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 495 LDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLRAQG 571 (588)
T ss_pred EeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHHHhh
Confidence 99999999999999999999988889999999999999999999999999999999999999986 479999987653
No 30
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=5.6e-70 Score=695.58 Aligned_cols=547 Identities=24% Similarity=0.366 Sum_probs=435.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000503 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1459)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1459)
++.++........++.+....+..-..........++.+++++.++..++.+.+.++....+.+....++..+++++++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~ 104 (576)
T TIGR02204 25 VALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERVVADIRRAVFAHLISL 104 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34445555555555555554443111111111222334445555556666777788888889999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1459)
Q Consensus 986 p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~ 1065 (1459)
|.++|++...|++++|+++|++.+++.....+..++..++.+++.++++.+.+|++.++++...++...+...+.+..+.
T Consensus 105 ~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~ 184 (576)
T TIGR02204 105 SPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRK 184 (576)
T ss_pred CHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888878777777777777777777777766554433333333333334444444
Q ss_pred HHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1459)
Q Consensus 1066 l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1145 (1459)
..+.....+....+++.|.++|+++||+|+.|+++.+++.+..+...+..........|.......+..+...++..+..
T Consensus 185 ~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 264 (576)
T TIGR02204 185 LSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVLWVGA 264 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566677889999999999999999999999999999888877776655555555554443333221111111111
Q ss_pred HhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEE
Q 000503 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1225 (1459)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1225 (1459)
.. ...+..+.|.+..+..++..+..++..+...+.++.....+.+|+.++++.++|........+..+|..+.|+|
T Consensus 265 ~~----v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 340 (576)
T TIGR02204 265 HD----VIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEF 340 (576)
T ss_pred HH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCCccCCcCCCceEEE
Confidence 00 01244578888888889999999999999999999999999999999988765421111111122344578999
Q ss_pred EEEEEEecCCC-CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEe
Q 000503 1226 QNVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP 1304 (1459)
Q Consensus 1226 ~nVs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~Vp 1304 (1459)
+||+|+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++|+|
T Consensus 341 ~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~ 420 (576)
T TIGR02204 341 EQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVP 420 (576)
T ss_pred EEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEc
Confidence 99999997543 57999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000503 1305 QSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1381 (1459)
Q Consensus 1305 Qdp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1381 (1459)
|||++|+|||||||.++++ .+|++++++++++++.++++.+ |+||.++|+|.+||||||||++||||++++|+||||
T Consensus 421 Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ilil 500 (576)
T TIGR02204 421 QDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLL 500 (576)
T ss_pred cCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEE
Confidence 9999999999999998654 5789999999999999999998 999999999999999999999999999999999999
Q ss_pred eccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000503 1382 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1382 DEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1457 (1459)
|||||+||.+|++.+.+.+++..+++|+|+||||++.+..||||++|++|+++|.|+|++|+++ ++.|++|++.+
T Consensus 501 DEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~-~~~~~~l~~~~ 575 (576)
T TIGR02204 501 DEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAK-GGLYARLARLQ 575 (576)
T ss_pred eCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHc-CChHHHHHhhc
Confidence 9999999999999999999998889999999999999999999999999999999999999985 57999998753
No 31
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.5e-69 Score=692.42 Aligned_cols=534 Identities=19% Similarity=0.189 Sum_probs=420.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 270 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-GSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1459)
Q Consensus 270 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 348 (1459)
++...+.+++.++...++.++..++..++|++++.++|.+.. +.+....+.++++++++.++..++.....+...+.+.
T Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (588)
T PRK11174 13 LKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAGQ 92 (588)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667788888889999999999999999999999997642 2222223344555666677788888888888899999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHH---HHHHhHHHHHHH
Q 000503 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYL---LYTQVKFAFVSG 424 (1459)
Q Consensus 349 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~l---L~~~lg~a~l~~ 424 (1459)
++...+...+|+|.++++...+.+.++|+++|.+++|++++.+... .+..++...+.+++++++ +.+.+++.+++
T Consensus 93 ~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~- 171 (588)
T PRK11174 93 HIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLG- 171 (588)
T ss_pred HHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999998889999999999999999998653 455555555544433332 23333333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHH----HHHHHHHHHHHHHHH
Q 000503 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMK----TRSSEVKHLSTRKYL 500 (1459)
Q Consensus 425 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~----~R~~El~~~~~~~~~ 500 (1459)
++++...+..++.++.++..++.++..++..+.+.|.++|+++||.|++|+.+.+++++ .|+.+.+..+.....
T Consensus 172 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 172 --TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333344556778888888999999999999999999999999999999988887744 344443333332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHh---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 501 DAWCVFFWATTPTLFSLFTFGLFALMGHQLDAA---------MVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTR 571 (1459)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~---------~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~ 571 (1459)
......+... .. +.++.++.+.+. +.++.| .+|+++.+...+..|+..++..+..+.++.++.+||.+
T Consensus 250 ~~~~~~~~~~-~~-~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ 326 (588)
T PRK11174 250 SAVLEFFASI-SI-ALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVT 326 (588)
T ss_pred HHHHHHHHHH-HH-HHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222211 11 122233334333 334444 45566677788899999999999999999999999999
Q ss_pred hhCCCCCchhhhhhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHH
Q 000503 572 FLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKS 651 (1459)
Q Consensus 572 fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKS 651 (1459)
+++.++..+.... ...+ ......|+++|++|.|+++ +++|+|+||+++||++++||||||||||
T Consensus 327 ~l~~~~~~~~~~~-~~~~----------~~~~~~i~~~~vsf~~~~~-----~~vL~~i~l~i~~G~~vaIvG~SGsGKS 390 (588)
T PRK11174 327 FLETPLAHPQQGE-KELA----------SNDPVTIEAEDLEILSPDG-----KTLAGPLNFTLPAGQRIALVGPSGAGKT 390 (588)
T ss_pred HHcCCCcccCCCc-cccC----------CCCCceEEEEeeEEeccCC-----CeeeeeeEEEEcCCCEEEEECCCCCCHH
Confidence 9976543211000 0000 0123459999999987642 2359999999999999999999999999
Q ss_pred HHHHHHhcCccCCCeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHh
Q 000503 652 SLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDIS 717 (1459)
Q Consensus 652 tll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~ 717 (1459)
||+++|+|++ |++|+|.++| .|+||||+||||++||||||.+|++ .+++++.++++.|+++++++
T Consensus 391 TL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~ 469 (588)
T PRK11174 391 SLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLP 469 (588)
T ss_pred HHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHH
Confidence 9999999999 9999999987 5999999999999999999999964 89999999999999999999
Q ss_pred hccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchh
Q 000503 718 LMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI 797 (1459)
Q Consensus 718 ~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l 797 (1459)
.+|+|++|.+||+|.+|||||||||+||||++++|+|+||||||||||++++++|.+. +.. +.+++|+|+||||++.+
T Consensus 470 ~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~-l~~-~~~~~TvIiItHrl~~i 547 (588)
T PRK11174 470 LLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQA-LNA-ASRRQTTLMVTHQLEDL 547 (588)
T ss_pred hcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-HhCCCEEEEEecChHHH
Confidence 9999999999999999999999999999999999999999999999999999999986 444 55789999999999999
Q ss_pred hcCCEEEEEeCCeEEEecCHHHHHhccccCc
Q 000503 798 SAADMVVVMDKGQVKWIGSSADLAVSLYSGF 828 (1459)
Q Consensus 798 ~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 828 (1459)
+.||+|++|++|+++++|+|+|+.++.+.+.
T Consensus 548 ~~aD~Iivl~~G~i~e~G~~~eL~~~~~~y~ 578 (588)
T PRK11174 548 AQWDQIWVMQDGQIVQQGDYAELSQAGGLFA 578 (588)
T ss_pred HhCCEEEEEeCCeEeecCCHHHHHhcchHHH
Confidence 9999999999999999999999987655443
No 32
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=6.8e-70 Score=686.92 Aligned_cols=503 Identities=19% Similarity=0.238 Sum_probs=396.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000503 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLV--VLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 983 (1459)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl 983 (1459)
++.++..++....++.+++.++..... ......+.. .++++.++..++.++..+.....+.+...+++.+++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~id~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 97 (529)
T TIGR02868 20 LLGALALGSAVALLGVSAWLISRAAEM--PPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRLA 97 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334445555555666666555432111 111111111 1223344556666777777778888999999999999999
Q ss_pred cCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000503 984 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIY-SKLQFFYRST 1062 (1459)
Q Consensus 984 ~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~-~~~~~~y~~~ 1062 (1459)
+.|..+|++.++|++++|+++|++.+++.+...+..++..++.+++.++++++.+|.+.++++....++ .....++.+.
T Consensus 98 ~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~ 177 (529)
T TIGR02868 98 RLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRA 177 (529)
T ss_pred ccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998888888888887777777777888887766554433332 2233344444
Q ss_pred HHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1063 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIAT 1142 (1459)
Q Consensus 1063 sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1142 (1459)
.++..+...+..+.+.+++.|+++|+++||+|++|+.+.+++.+..++..+..........+......++..+...++..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (529)
T TIGR02868 178 ARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGALW 257 (529)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444556678889999999999999999999999999999888888777665555444443333333222211111
Q ss_pred HHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCC-CCCCCCCCCc
Q 000503 1143 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQ-SLSPDWPFQG 1221 (1459)
Q Consensus 1143 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~-~~~~~wp~~g 1221 (1459)
+.... ...+..+.|.+...+.++..+..++..+...+.++.....+.+|+.++++.++|...... .+...+|..+
T Consensus 258 ~g~~~----~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~ 333 (529)
T TIGR02868 258 AGGPA----VADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVPAAGALGLGKP 333 (529)
T ss_pred HHHHH----HhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCcccCCCCc
Confidence 11100 012345678888888888889999999999999999999999999999987765322111 1111244567
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+++|++|+|.+||+|++++ .+++|++++
T Consensus 334 ~I~~~~vsf~Y~~~-~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~ 411 (529)
T TIGR02868 334 TLELRDLSFGYPGS-PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRIS 411 (529)
T ss_pred eEEEEEEEEecCCC-CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheE
Confidence 89999999999754 4699999999999999999999999999999999999999999999999999999 999999999
Q ss_pred EEeCCCcCCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1302 VVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1302 ~VpQdp~lf~gTIReNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
||||||++|+|||||||.+++ ..+|+++++|++.++++++++++ |+||.+||+|.+||||||||||||||++++|+|
T Consensus 412 ~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~i 491 (529)
T TIGR02868 412 VFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPI 491 (529)
T ss_pred EEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999875 46899999999999999999998 999999999999999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccCh
Q 000503 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRI 1416 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl 1416 (1459)
||||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 492 liLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 492 LLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999999988999999999995
No 33
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.4e-69 Score=625.41 Aligned_cols=506 Identities=24% Similarity=0.369 Sum_probs=392.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHH
Q 000503 939 SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILN 1018 (1459)
Q Consensus 939 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~ 1018 (1459)
..-+..|.+..+...++..++.+.+++...++-+....+.++..+...+++|.+..+|.+.+.+.+-...+...+...+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 34567888899999999999999999999999999999999999999999999999998888777766666555444444
Q ss_pred HHHHHHHhHHHhhhHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhc
Q 000503 1019 ILLANFVGLLGIAVVLSY-VQVFFLLLLVPFWFIYSKLQ---FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAF 1094 (1459)
Q Consensus 1019 ~~~~~~~~~l~~~~~~~~-~~~~~~~~~~pl~~~~~~~~---~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf 1094 (1459)
.++..++.+......+.+ ..+.++++++.....|..+. -.+|. ..|+....+....-+...|++.+-.+||+|
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn---~fR~~~N~Adn~as~~~~dsL~Nye~VKsf 230 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRN---RFRKAMNNADNSASRRAYDSLINYEIVKSF 230 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHH---HHHHHHHhhhhHHHHHHHHHHhhHHHHHHc
Confidence 443333333222222222 22333333322222222111 11111 112222223333345678999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHH
Q 000503 1095 KSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVS 1174 (1459)
Q Consensus 1095 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~ 1174 (1459)
+.|++..+++...+..+.+......+....+.+.-..+.. ...+.+.+.+..+ ...+..+.|......+...++..
T Consensus 231 NnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFs---v~~~~im~l~~~g-i~~~~mtvgdlv~~n~l~~qL~~ 306 (591)
T KOG0057|consen 231 NNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFS---VALTFIMVLGSNG-IAAGKMTVGDLVMVNSLLFQLSL 306 (591)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHH---HHHHHHHHHHhhh-hhhccccccchhhHHHHHHHHHh
Confidence 9999999999999998888765544333322222222221 1122222222222 22345567777777788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEE
Q 000503 1175 LLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVG 1254 (1459)
Q Consensus 1175 ~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~Gekvg 1254 (1459)
+++.+-..+.++-.++.-.+-++...+.... .... +.+.-..+|.|+|+||+|.|.++ +++|+|+||+|++|||||
T Consensus 307 ~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~--i~~~-~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekVa 382 (591)
T KOG0057|consen 307 PLNFLGSVYRELRQALTDMRTLFILLEVDED--IQEA-ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKVA 382 (591)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhhhhhhh--hhhc-cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEEE
Confidence 8888888888888777776666544322111 1111 12223446789999999999865 569999999999999999
Q ss_pred EECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCC-CChHHHHHHH
Q 000503 1255 IVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVL 1333 (1459)
Q Consensus 1255 IvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~-~~d~ei~~aL 1333 (1459)
|||+|||||||++++|+||++ ++|+|+|||+||++++++.+|+.||+||||..||++||-+||.+++. .+|||+.+++
T Consensus 383 IvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~ 461 (591)
T KOG0057|consen 383 IVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEAC 461 (591)
T ss_pred EECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHH
Confidence 999999999999999999999 99999999999999999999999999999999999999999999876 4899999999
Q ss_pred HHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEE
Q 000503 1334 EKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVIT 1411 (1459)
Q Consensus 1334 ~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~ 1411 (1459)
++++++|.+.++ |++|.|||+|..||||||||++||||+|++|+|+++|||||+||.+||+.|.+.|.+...++|+|+
T Consensus 462 k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~ 541 (591)
T KOG0057|consen 462 KRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIM 541 (591)
T ss_pred HHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEE
Confidence 999999999999 999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred eccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000503 1412 IAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1412 IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~ 1457 (1459)
|+||++++++||+|+++|+|+|+|.|+|+||++ +++.|+.+|..+
T Consensus 542 IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 542 IVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQ 586 (591)
T ss_pred EEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccc
Confidence 999999999999999999999999999999999 678999888653
No 34
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.4e-69 Score=682.58 Aligned_cols=508 Identities=21% Similarity=0.280 Sum_probs=410.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHH
Q 000503 940 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNI 1019 (1459)
Q Consensus 940 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~ 1019 (1459)
.|+++++++.++..++.++..+.....+.+...+++..+++++++.|+++|++.++|++++|+++|++.+.......+..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~ 116 (569)
T PRK10789 37 MWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLT 116 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34455555555666667777777777889999999999999999999999999999999999999999998666555655
Q ss_pred HHHHHHhHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHH
Q 000503 1020 LLANFVGLLGIAVVL-SYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSED 1098 (1459)
Q Consensus 1020 ~~~~~~~~l~~~~~~-~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~ 1098 (1459)
++..++..++.++++ .+.+|.+.++++..+.+...+.+.+.+..++..+......+.+.+.+.|+++|+++||+|++|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~ 196 (569)
T PRK10789 117 LVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLED 196 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccH
Confidence 655544444444333 3555655444333333333334444444444444444566778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 000503 1099 YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATM-AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLG 1177 (1459)
Q Consensus 1099 ~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~ 1177 (1459)
.+.+++.+..++..+..+.......+..........+...++... .... ..+..+.|.+..+..+...+..++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv-----~~g~lt~g~l~a~~~~~~~~~~pl~ 271 (569)
T PRK10789 197 RQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMV-----VNGSLTLGQLTSFVMYLGLMIWPML 271 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCcCHHHHHHHHHHHHHHHHHHH
Confidence 999999998888777766554444433332222222111111111 1111 1244578888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEEC
Q 000503 1178 NFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVG 1257 (1459)
Q Consensus 1178 ~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvG 1257 (1459)
.+...+.++.....+.+|+.++.+.+++........+ +..+.|+|+||+|+|+++.+++|+|+||+|+|||++||+|
T Consensus 272 ~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~~~---~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG 348 (569)
T PRK10789 272 ALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEPVP---EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICG 348 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCC---CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEEC
Confidence 9999999999999999999999987654321111111 2356899999999998655679999999999999999999
Q ss_pred CCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCC-CCChHHHHHHHHHh
Q 000503 1258 RTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKC 1336 (1459)
Q Consensus 1258 rtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~-~~~d~ei~~aL~~~ 1336 (1459)
+||||||||+++|.|+++|++|+|.+||.|+++++.+++|+++++|||+|++|+||+||||.++. ..+|++++++++.+
T Consensus 349 ~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~ 428 (569)
T PRK10789 349 PTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLA 428 (569)
T ss_pred CCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999998874 46899999999999
Q ss_pred cHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEecc
Q 000503 1337 HVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAH 1414 (1459)
Q Consensus 1337 ~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaH 1414 (1459)
++++++.++ |+||.++++|.+||||||||++||||++++|+|||||||||+||+++++.+++.|++..+++|+|+|||
T Consensus 429 ~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH 508 (569)
T PRK10789 429 SVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAH 508 (569)
T ss_pred CCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 999999988 999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred ChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHh
Q 000503 1415 RISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1456 (1459)
Q Consensus 1415 rl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~ 1456 (1459)
|++++..||+|++|++|+++|.|+|++|++++ +.|++|++.
T Consensus 509 ~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~y~~l~~~ 549 (569)
T PRK10789 509 RLSALTEASEILVMQHGHIAQRGNHDQLAQQS-GWYRDMYRY 549 (569)
T ss_pred chhHHHcCCEEEEEeCCEEEEecCHHHHHHcC-ChHHHHHHH
Confidence 99999999999999999999999999999865 689999874
No 35
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=4e-68 Score=674.62 Aligned_cols=543 Identities=22% Similarity=0.300 Sum_probs=425.8
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000503 905 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 984 (1459)
Q Consensus 905 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 984 (1459)
+++.++..++....++.+++..+..... .....++..++++.++..+..++..........+....+++++++++++
T Consensus 25 ~~~~~~~~~~~~~~p~~~~~iid~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~ 101 (585)
T TIGR01192 25 VIANITLAAITIAEPILFGRIIDAISSK---SDVLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRATLLTEAFGRIIS 101 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3445555566666667666655532111 1111222222223333333344444444455556666677899999999
Q ss_pred CccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 985 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1064 (1459)
Q Consensus 985 ~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr 1064 (1459)
.|++||++.++|++++|+++|++.+.+.+...+...+..++.+++.++++.+.+|.++++++.+..++..+.+.+.+..+
T Consensus 102 l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~ 181 (585)
T TIGR01192 102 MPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQRTK 181 (585)
T ss_pred CCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998877777766666666666666667777777766655555555555566666666
Q ss_pred HHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1065 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1144 (1459)
Q Consensus 1065 ~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1144 (1459)
+..+......+.+.+++.|+++|+++||+|+.++.+.+++.+..++..+..+.......+......++..+...++..+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g 261 (585)
T TIGR01192 182 NGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCILVIG 261 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666777889999999999999999999999999998888877766655444333333322222222111111111
Q ss_pred HHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCC-CCccE
Q 000503 1145 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWP-FQGLI 1223 (1459)
Q Consensus 1145 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp-~~g~I 1223 (1459)
... ...+..+.|.+..++.++..+..++..+...+.++.....+.+|+.++.+.+++...... + ..++ ..+.|
T Consensus 262 ~~~----v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-~-~~~~~~~~~i 335 (585)
T TIGR01192 262 TVL----VIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-A-PELPNVKGAV 335 (585)
T ss_pred HHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc-C-CCCCCCCCeE
Confidence 110 012445788888888888889999999999999999999999999999876554321111 1 1122 35679
Q ss_pred EEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000503 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1459)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1459)
+|+||+|+|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+|+.+++.+++|+++++|
T Consensus 336 ~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 414 (585)
T TIGR01192 336 EFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATV 414 (585)
T ss_pred EEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999753 4689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcCCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000503 1304 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1380 (1459)
Q Consensus 1304 pQdp~lf~gTIReNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1380 (1459)
||||.+|++|+||||.++. ..+|++++++++.+++++++.++ |+||.++++|.+||||||||++|||||+++|+|||
T Consensus 415 ~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ili 494 (585)
T TIGR01192 415 FQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILV 494 (585)
T ss_pred ccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998874 45889999999999999999887 99999999999999999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000503 1381 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1458 (1459)
Q Consensus 1381 LDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1458 (1459)
||||||+||.++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|++++ +.|+++++.+.
T Consensus 495 lDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~y~~l~~~~~ 571 (585)
T TIGR01192 495 LDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKD-GRFYKLLRRSG 571 (585)
T ss_pred EECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCC-ChHHHHHHhCc
Confidence 999999999999999999999888899999999999999999999999999999999999999864 69999997653
No 36
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=4.9e-68 Score=670.06 Aligned_cols=515 Identities=22% Similarity=0.284 Sum_probs=408.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccC-CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000503 906 LSAILMQASRNGNDLWLSYWVDTTG-SSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 984 (1459)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 984 (1459)
++.++..++....++.+++..+... ..........++++++++.++..++.+++.+.....+.+...+++.++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~ 89 (529)
T TIGR02857 10 LLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVAA 89 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555555556666665555321 111111223345556666777778888888888999999999999999999999
Q ss_pred CccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 985 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1064 (1459)
Q Consensus 985 ~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr 1064 (1459)
.|..+|++.++|++++|+++|++.+++.+...+..++..++.+++.++++.+.+|+++++++....+...+...+.+..+
T Consensus 90 ~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~ 169 (529)
T TIGR02857 90 LGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAAQ 169 (529)
T ss_pred CCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888777777777766666666666666776544333322222222222223223
Q ss_pred HHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000503 1065 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIA-TM 1143 (1459)
Q Consensus 1065 ~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~-~~ 1143 (1459)
...+......+.+.+++.|+++|+++||+|+.|+++.+++.+..++..+..........+.....+++..+...++. +.
T Consensus 170 ~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (529)
T TIGR02857 170 AAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVYI 249 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344555678899999999999999999999999999988888777766665555555555544433222211 11
Q ss_pred HHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccE
Q 000503 1144 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLI 1223 (1459)
Q Consensus 1144 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I 1223 (1459)
..... .+..+.|.+..++.++..+..++..+...+..+.....+.+|+.++++.++++.... +...+..+.|
T Consensus 250 ~~~~~-----~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~~~~~~~i 321 (529)
T TIGR02857 250 GFRLL-----AGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVTAAPAPSL 321 (529)
T ss_pred HHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCCCCCCCeE
Confidence 11111 234567777788888888999999999999999999999999999998554322111 1112234689
Q ss_pred EEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000503 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1459)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1459)
+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.+++|++++||
T Consensus 322 ~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v 401 (529)
T TIGR02857 322 EFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWV 401 (529)
T ss_pred EEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEE
Confidence 99999999976555799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcCCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000503 1304 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1380 (1459)
Q Consensus 1304 pQdp~lf~gTIReNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1380 (1459)
||||++|+|||||||.++. ..+|++++++++.++++++++++ |+||.++|+|.+||||||||++||||++++|+|+|
T Consensus 402 ~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ili 481 (529)
T TIGR02857 402 PQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLL 481 (529)
T ss_pred cCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998865 46889999999999999999999 99999999999999999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEE
Q 000503 1381 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILIL 1428 (1459)
Q Consensus 1381 LDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl 1428 (1459)
||||||+||++|++.+++.|++..+++|+|+||||+++++.||+|+||
T Consensus 482 lDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 482 LDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred EeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999988899999999999999999999986
No 37
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.8e-67 Score=683.34 Aligned_cols=538 Identities=21% Similarity=0.252 Sum_probs=444.4
Q ss_pred chHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 268 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 347 (1459)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 347 (1459)
.+++..++.+++.++...++.++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLE 204 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566778888888999999999999999999999998764333344455566667777778888888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000503 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 425 (1459)
Q Consensus 348 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~ 425 (1459)
.++...+...+|+|.++++...+++.++|++++.++ |++.+.+.... +..+...++-++ .+++++..-++.+++.+
T Consensus 205 ~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l 282 (686)
T TIGR03797 205 TRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALL-NLGLMFYYSWKLALVAV 282 (686)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888899999999987 78888875432 233444444433 33333333334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 426 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 505 (1459)
Q Consensus 426 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 505 (1459)
+++++.+.+..++.+.+.+..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++++..++..+...+......+..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (686)
T TIGR03797 283 ALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLT 362 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555556677788888899999999999999999999999999999999999998888877666666666555555444
Q ss_pred HHHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhh
Q 000503 506 FFWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 583 (1459)
Q Consensus 506 ~~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 583 (1459)
.+...... .+.++++|+|.+.++.+|.|.++++.+++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 363 ~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~- 441 (686)
T TIGR03797 363 VFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA- 441 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC-
Confidence 33333222 233456788888889999999999999999999999999999999999999999999999765422110
Q ss_pred hhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC
Q 000503 584 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 663 (1459)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~ 663 (1459)
. ..+ ......++++|++|+|++++ +++|+|+||+|++||.++|+|+||||||||+++|+|+++|
T Consensus 442 ~--~~~----------~~~~~~I~~~nvsf~Y~~~~----~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p 505 (686)
T TIGR03797 442 K--TDP----------GKLSGAIEVDRVTFRYRPDG----PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP 505 (686)
T ss_pred c--CCC----------CCCCceEEEEEEEEEcCCCC----ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 0 000 11234699999999997432 3459999999999999999999999999999999999999
Q ss_pred CCeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCC
Q 000503 664 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1459)
Q Consensus 664 ~~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~ 730 (1459)
++|+|.++| .||||||+|++|+|||||||.++++.++++..++++.|+++++++.+|+|++|.+||+
T Consensus 506 ~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 506 ESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred CCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 999999987 5999999999999999999999988899999999999999999999999999999999
Q ss_pred CcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000503 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1459)
Q Consensus 731 g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~ 810 (1459)
|.+||||||||++||||++++|+|++||||||+||+++++++.+. +.. . ++|+|+||||++.++.||+|++|++|+
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~-L~~-~--~~T~IiItHr~~~i~~~D~Iivl~~G~ 661 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSES-LER-L--KVTRIVIAHRLSTIRNADRIYVLDAGR 661 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-h--CCeEEEEecChHHHHcCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999988 333 2 589999999999999999999999999
Q ss_pred EEEecCHHHHHhccccCc
Q 000503 811 VKWIGSSADLAVSLYSGF 828 (1459)
Q Consensus 811 i~~~g~~~~l~~~~~~~~ 828 (1459)
|++.|+++|+.++.+.+.
T Consensus 662 iv~~G~~~~Ll~~~~~y~ 679 (686)
T TIGR03797 662 VVQQGTYDELMAREGLFA 679 (686)
T ss_pred EEEECCHHHHHhCCcHHH
Confidence 999999999987655443
No 38
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.1e-67 Score=685.71 Aligned_cols=543 Identities=20% Similarity=0.214 Sum_probs=446.3
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 271 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 350 (1459)
Q Consensus 271 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1459)
+..++.+++.++..++..++..++.++.|++++.++|.+..+......+.++++++++.++..++.....+...+++.++
T Consensus 146 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (710)
T TIGR03796 146 WRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIKL 225 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667777888888999999999999999999998765333333445566666677778888888888999999999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000503 351 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 429 (1459)
Q Consensus 351 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~ 429 (1459)
...+...+|+|.++++...+.+.++|++++.++.| +.+.++.. .+..+....+.+++.+++++..-++.+++.++.++
T Consensus 226 ~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 304 (710)
T TIGR03796 226 AVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAA 304 (710)
T ss_pred HHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988889999999999888 56776543 44444544545444444444444444444455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 430 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 509 (1459)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 509 (1459)
+.+.+..++.++..+..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++.+.++.+...+......+...+..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (710)
T TIGR03796 305 INVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPT 384 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566777888888889999999999999999999999999999999999999999888888877766665555443332
Q ss_pred HHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcC
Q 000503 510 TTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 587 (1459)
Q Consensus 510 ~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 587 (1459)
... ..+.++++|+|.+.++.+|.|.+++++++++.+..|+..++..+..+.++..+++|+.++++.++..+.....
T Consensus 385 ~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~-- 462 (710)
T TIGR03796 385 LLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEE-- 462 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc--
Confidence 222 2234567788888899999999999999999999999999999999999999999999999765432211000
Q ss_pred CCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeE
Q 000503 588 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 667 (1459)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~ 667 (1459)
.+. ............++++|++|+|+..+ +++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+
T Consensus 463 ~~~---~~~~~~~~~~~~I~~~~vsf~y~~~~----~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~ 535 (710)
T TIGR03796 463 APA---AGSEPSPRLSGYVELRNITFGYSPLE----PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGE 535 (710)
T ss_pred ccc---cccccCCCCCCeEEEEEEEEecCCCC----CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcE
Confidence 000 00000011235799999999997532 34599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------cEEEEcCCCCCCCCCHHHHhccCC-CCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcc
Q 000503 668 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1459)
Q Consensus 668 i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~ 733 (1459)
|.++| .|+||||+|++|++||||||.++. +.+++++.++++.++++++++.+|+|++|.+||+|.+
T Consensus 536 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~ 615 (710)
T TIGR03796 536 ILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGAN 615 (710)
T ss_pred EEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCC
Confidence 99987 599999999999999999999875 5789999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEE
Q 000503 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKW 813 (1459)
Q Consensus 734 LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~ 813 (1459)
|||||||||+||||++++|+|+|||||||+||+++++++++.+ .. .++|+|+||||++.++.||+|++|++|++++
T Consensus 616 LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l-~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~ 691 (710)
T TIGR03796 616 LSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNL-RR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQ 691 (710)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHH-Hh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEEE
Confidence 9999999999999999999999999999999999999999984 32 4799999999999999999999999999999
Q ss_pred ecCHHHHHhccccC
Q 000503 814 IGSSADLAVSLYSG 827 (1459)
Q Consensus 814 ~g~~~~l~~~~~~~ 827 (1459)
.|+++|+.+..+.+
T Consensus 692 ~G~~~~Ll~~~~~y 705 (710)
T TIGR03796 692 RGTHEELWAVGGAY 705 (710)
T ss_pred ecCHHHHHHcCCcH
Confidence 99999998765544
No 39
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=7.5e-67 Score=678.32 Aligned_cols=535 Identities=21% Similarity=0.288 Sum_probs=445.1
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1459)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 348 (1459)
.++..++.+++.+....++.++..++.++.|++++.++|.+....+....+.++++++++.++.+++.....+...+++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGK 216 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677888888888899999999999999999999987543333344445555666677778888888888999999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000503 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGLA 426 (1459)
Q Consensus 349 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~ 426 (1459)
++...+...+|+|.++++... .+.++|++++.+ .|++.+.+.... +..+...++.++..+++++ .-++.+++.++
T Consensus 217 ~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~li~l~ 293 (694)
T TIGR03375 217 KADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAI-IGGPLVWVPLV 293 (694)
T ss_pred HHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHH
Confidence 999999999999999999887 677899999998 799999986542 3334444444444333333 33444445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 427 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 506 (1459)
Q Consensus 427 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 506 (1459)
++++.+.+..++.+++.+..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..++..+...+..........
T Consensus 294 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (694)
T TIGR03375 294 AIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATN 373 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556667778889999999999999999999999999999999999999999999999888877777776666655443
Q ss_pred HHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhh
Q 000503 507 FWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 584 (1459)
Q Consensus 507 ~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 584 (1459)
+...... .+.++++|+|.+.++.+|+|.+++++.++..+..|+..++..+..+.+++++++|+.++++.++..+....
T Consensus 374 ~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~ 453 (694)
T TIGR03375 374 FAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTR 453 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 3333222 23456778888888999999999999999999999999999999999999999999999987543211000
Q ss_pred hcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000503 585 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 664 (1459)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~ 664 (1459)
... .......|+++|++|+|+.. + +++|+|+||+|++||.++|+|+||||||||+++|+|+++|+
T Consensus 454 ---~~~--------~~~~~~~I~~~~vsf~Y~~~-~---~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~ 518 (694)
T TIGR03375 454 ---FLH--------RPRLQGEIEFRNVSFAYPGQ-E---TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT 518 (694)
T ss_pred ---CCC--------CCCccceEEEEEEEEEeCCC-C---ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 000 01123569999999999643 1 34599999999999999999999999999999999999999
Q ss_pred CeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCC
Q 000503 665 HGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1459)
Q Consensus 665 ~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~ 730 (1459)
+|+|.++| .|+||+|+|++|++||+|||.++++ .+++++.++++.|+++++++.+|+|++|.+||+
T Consensus 519 ~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 519 EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred CceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 99999987 6999999999999999999999986 889999999999999999999999999999999
Q ss_pred CcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000503 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1459)
Q Consensus 731 g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~ 810 (1459)
|.+||||||||++||||++++|+|++||||||+||+++++.+.+. +.. ..+++|+|+||||++.++.||+|++|++|+
T Consensus 599 G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~-l~~-~~~~~T~iiItHrl~~~~~~D~iivl~~G~ 676 (694)
T TIGR03375 599 GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDR-LKR-WLAGKTLVLVTHRTSLLDLVDRIIVMDNGR 676 (694)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHH-HhCCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999887 443 456899999999999999999999999999
Q ss_pred EEEecCHHHHHhc
Q 000503 811 VKWIGSSADLAVS 823 (1459)
Q Consensus 811 i~~~g~~~~l~~~ 823 (1459)
++++|+|+|+++.
T Consensus 677 i~e~G~~~eLl~~ 689 (694)
T TIGR03375 677 IVADGPKDQVLEA 689 (694)
T ss_pred EEeeCCHHHHHHH
Confidence 9999999999754
No 40
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.9e-66 Score=672.64 Aligned_cols=535 Identities=19% Similarity=0.188 Sum_probs=424.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 274 CCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSS 353 (1459)
Q Consensus 274 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 353 (1459)
++.+++.++...++.++..++..+.|++++.++|.+..+.+.......++.++++.++..++.....+...+.+.++...
T Consensus 156 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 235 (711)
T TIGR00958 156 SGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLR 235 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556667777888899999999999999999998864322222222233344445555566655666666777788888
Q ss_pred HHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000503 354 IMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLI 432 (1459)
Q Consensus 354 L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~~~~ 432 (1459)
+...+|+|.++.+...+++.++|++.|.++.|++.+.+.. ..+..++...+.+++++++++..-...+++.++.+++..
T Consensus 236 lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~ 315 (711)
T TIGR00958 236 IREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVF 315 (711)
T ss_pred HHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8899999999999988888899999999999999998754 345555555555554444433322222333333334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000503 433 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATT- 511 (1459)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~- 511 (1459)
.+..++.++..+..++..+..++..+...|.++|+++||.|++|+.+.+++++..++-.+...+.....+.........
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (711)
T TIGR00958 316 LAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLG 395 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667777888888888999999999999999999999999999999888777665544444333333322222221111
Q ss_pred -HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCC
Q 000503 512 -PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 590 (1459)
Q Consensus 512 -~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~ 590 (1459)
...+.++.+|.|.+.++.+|++.+++++.+...+..|+..++..+..+.++.++.+||.+|++.++..+.... ..+
T Consensus 396 ~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~- 472 (711)
T TIGR00958 396 MLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGT--LAP- 472 (711)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CCC-
Confidence 1223455677888888999999999999999999999999999999999999999999999976543221000 000
Q ss_pred cccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEE
Q 000503 591 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 670 (1459)
Q Consensus 591 ~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~ 670 (1459)
.+....|+++|++|+|+.+++ +++|+|+||+|+|||.++||||||||||||+++|+|+++|++|+|.+
T Consensus 473 ---------~~~~~~I~~~nVsf~Y~~~~~---~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 540 (711)
T TIGR00958 473 ---------LNLEGLIEFQDVSFSYPNRPD---VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLL 540 (711)
T ss_pred ---------CCCCCeEEEEEEEEECCCCCC---CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 112356999999999975322 34699999999999999999999999999999999999999999999
Q ss_pred cC-------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 671 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 671 ~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
+| +|+||||+|++|++||||||.+|.+ .++++..++++.++++++++.+|+|++|.+||+|.+|||
T Consensus 541 dg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 541 DGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 87 5999999999999999999999964 678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecC
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~ 816 (1459)
|||||++||||++++|+|+|||||||+||+++++.+.+. . ..+++|+|+||||++.++.||+|++|++|+|+++|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~~-~---~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt 696 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQES-R---SRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGT 696 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHHh-h---ccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeC
Confidence 999999999999999999999999999999999988872 1 346899999999999999999999999999999999
Q ss_pred HHHHHhccccC
Q 000503 817 SADLAVSLYSG 827 (1459)
Q Consensus 817 ~~~l~~~~~~~ 827 (1459)
|+|++++.+.+
T Consensus 697 ~~eL~~~~~~y 707 (711)
T TIGR00958 697 HKQLMEDQGCY 707 (711)
T ss_pred HHHHHhCCCch
Confidence 99998765543
No 41
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=6.8e-66 Score=670.81 Aligned_cols=536 Identities=21% Similarity=0.243 Sum_probs=435.2
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 351 (1459)
Q Consensus 272 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r 351 (1459)
..++.+++.++...+..++..++.++.|++++.++|.+..+......+.++++++++.++..++.....+...+++.++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (708)
T TIGR01193 149 PLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQRLS 228 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777788888889999999999999999999987543333333445555666677777888888888899999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000503 352 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-F-HDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 429 (1459)
Q Consensus 352 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~-~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~ 429 (1459)
..+...+|+|.++++...+++.++|++++.++ |.+.+.+.... + ..+...++.++..+++++.... .+++.+++++
T Consensus 229 ~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-l~li~l~~~~ 306 (708)
T TIGR01193 229 IDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNML-LFLLSLLSIP 306 (708)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHHHHHH
Confidence 99999999999999999988899999999998 99998875432 2 2233444444333333333322 2333333344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 430 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 509 (1459)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 509 (1459)
+.+.+..++.++.++..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++..++..+...+..........+..
T Consensus 307 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (708)
T TIGR01193 307 VYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKA 386 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455677788888999999999999999999999999999999999999988887766555555554444433332222
Q ss_pred HHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcC
Q 000503 510 TTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 587 (1459)
Q Consensus 510 ~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 587 (1459)
... ..+.++++|+|.+.++.+|+|.++++.++...+..|+..+...+..+.+++++++|+.++++.++..+.... .
T Consensus 387 ~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~--~ 464 (708)
T TIGR01193 387 VTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKK--R 464 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccc--c
Confidence 221 224456788899899999999999999999999999999999999999999999999999976543221100 0
Q ss_pred CCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeE
Q 000503 588 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 667 (1459)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~ 667 (1459)
.+ .......|+++|++|+|+.+ +++|+|+||+|++|+.++|+||||||||||+++|+|+++|++|+
T Consensus 465 ~~---------~~~~~~~I~~~~vsf~y~~~-----~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~ 530 (708)
T TIGR01193 465 TE---------LNNLNGDIVINDVSYSYGYG-----SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGE 530 (708)
T ss_pred cC---------CCCCCCcEEEEEEEEEcCCC-----CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcE
Confidence 00 01223579999999999632 24599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------cEEEEcCCCCCCCCCHHHHhccCC--CCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCc
Q 000503 668 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1459)
Q Consensus 668 i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 732 (1459)
|.++| .|+||||+|++|++||||||.+|. ..++++..++++.++++++++.+|+|++|.+||+|.
T Consensus 531 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 531 ILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99987 599999999999999999999983 478889999999999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000503 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1459)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~ 812 (1459)
+|||||||||+||||++++|+|+|||||||+||+++++++.+.+ .. . +++|+|+||||++.+..||+|++|++|+++
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L-~~-~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~ 687 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNL-LN-L-QDKTIIFVAHRLSVAKQSDKIIVLDHGKII 687 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHH-HH-h-cCCEEEEEecchHHHHcCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999998874 43 3 679999999999999999999999999999
Q ss_pred EecCHHHHHhccccCc
Q 000503 813 WIGSSADLAVSLYSGF 828 (1459)
Q Consensus 813 ~~g~~~~l~~~~~~~~ 828 (1459)
+.|+++|+++..+.+.
T Consensus 688 ~~G~~~~L~~~~~~y~ 703 (708)
T TIGR01193 688 EQGSHDELLDRNGFYA 703 (708)
T ss_pred EECCHHHHHhcCCcHH
Confidence 9999999987655443
No 42
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=6.5e-68 Score=629.81 Aligned_cols=475 Identities=25% Similarity=0.375 Sum_probs=359.8
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC----CeEEEEcC--------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT----HGSIHASG-------- 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~----~G~i~~~~-------- 672 (1459)
.++++|.+..+.... .+ ..+++||||++.+||.++|||.|||||||+.++|+|..++. +|+|.++|
T Consensus 5 lL~V~nL~v~~~~~~-~~-~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~ 82 (539)
T COG1123 5 LLEVENLTVEFATDG-GR-VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSE 82 (539)
T ss_pred eEEEeceEEEEecCC-cc-eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCH
Confidence 578899998887652 22 35799999999999999999999999999999999999887 89998876
Q ss_pred ---------cEEEEcCCCC-CCCC--CHHHHhc----cCCCC-C---HHHHHHHHHHhcchhhHhhccCCCcccccCCCc
Q 000503 673 ---------SIAYVPQVPW-ILSG--TIRDNIL----FGKNY-D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1459)
Q Consensus 673 ---------~i~y~~Q~~~-l~~~--ti~~nI~----~g~~~-~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 732 (1459)
.|||++|+|+ .+|. ||.+-|. ..... . .++..+.++..+|.+.... +....
T Consensus 83 ~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPh 153 (539)
T COG1123 83 REMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPH 153 (539)
T ss_pred HHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCc
Confidence 4999999997 4554 7777664 22222 1 2233445555555443322 45677
Q ss_pred ccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeE
Q 000503 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 811 (1459)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i 811 (1459)
.|||||||||.||+||..+|++||+||||+|||+.+..+|++.+.......|.++|+|||++..+.+ ||+|+||.+|++
T Consensus 154 eLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~i 233 (539)
T COG1123 154 QLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEI 233 (539)
T ss_pred ccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEE
Confidence 9999999999999999999999999999999999999999987332223457799999999999886 999999999999
Q ss_pred EEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHH
Q 000503 812 KWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKN 891 (1459)
Q Consensus 812 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~ 891 (1459)
+|.|+.+++..+...-+
T Consensus 234 VE~G~~~~i~~~p~hpY--------------------------------------------------------------- 250 (539)
T COG1123 234 VETGPTEEILSNPQHPY--------------------------------------------------------------- 250 (539)
T ss_pred EEecCHHHHHhccCCcc---------------------------------------------------------------
Confidence 99999998864321000
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 892 YAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAA 971 (1459)
Q Consensus 892 y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 971 (1459)
-+. + +.. .+...
T Consensus 251 -T~~----------L------------------l~a-----~p~~~---------------------------------- 262 (539)
T COG1123 251 -TRG----------L------------------LAA-----VPRLG---------------------------------- 262 (539)
T ss_pred -cHH----------H------------------Hhh-----CCCcc----------------------------------
Confidence 000 0 000 00000
Q ss_pred HHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000503 972 VKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFI 1051 (1459)
Q Consensus 972 ~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~ 1051 (1459)
T Consensus 263 -------------------------------------------------------------------------------- 262 (539)
T COG1123 263 -------------------------------------------------------------------------------- 262 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1052 YSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQL 1131 (1459)
Q Consensus 1052 ~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~ 1131 (1459)
T Consensus 263 -------------------------------------------------------------------------------- 262 (539)
T COG1123 263 -------------------------------------------------------------------------------- 262 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCC
Q 000503 1132 LAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQ 1211 (1459)
Q Consensus 1132 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~ 1211 (1459)
..... ..+.+
T Consensus 263 -------------------~~~~~---------------------------------------------~~~~~------ 272 (539)
T COG1123 263 -------------------DEKII---------------------------------------------RLPRR------ 272 (539)
T ss_pred -------------------ccccc---------------------------------------------ccccc------
Confidence 00000 00000
Q ss_pred CCCCCCCCCccEEEEEEEEEecCC---------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEE
Q 000503 1212 SLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1282 (1459)
Q Consensus 1212 ~~~~~wp~~g~I~f~nVs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~ 1282 (1459)
.+. +....++++|++++|... ...+++||||++++||.+||||+||||||||.++|+|+.+|++|+|.
T Consensus 273 ~~~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~ 349 (539)
T COG1123 273 GPL---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSII 349 (539)
T ss_pred ccc---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE
Confidence 000 012248899999999741 24689999999999999999999999999999999999999999999
Q ss_pred ECCEe--CCCCChHHHhcccEEEeCCCcC--C-CccHHHhcC-cCCCCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCC
Q 000503 1283 VDGLN--IINTPVRDLRGRFAVVPQSPFL--F-EGSLRDNLD-PFHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESG 1355 (1459)
Q Consensus 1283 IDG~d--i~~i~~~~lR~~i~~VpQdp~l--f-~gTIReNLd-p~~~~~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G 1355 (1459)
++|.| .+.-+...+|+++-+|.|||+- - ..||+++|. |...+.... .+-.+..+.+.++..||.. ..+...
T Consensus 350 ~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~--~~~~~~rv~~ll~~VgL~~~~l~ryP 427 (539)
T COG1123 350 FDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGS--GAERRARVAELLELVGLPPEFLDRYP 427 (539)
T ss_pred EeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccc--hHHHHHHHHHHHHHcCCCHHHHhcCc
Confidence 99977 3333456688899999999973 2 359999984 322111100 1111122333344446666 356677
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCe
Q 000503 1356 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGH 1432 (1459)
Q Consensus 1356 ~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~ 1432 (1459)
..||||||||+||||||..+|++||+|||||+||+-+...|.+.|.+.-+ +.|.|+|||++..++. ||||+||++|+
T Consensus 428 ~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~ 507 (539)
T COG1123 428 HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGR 507 (539)
T ss_pred hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCe
Confidence 78999999999999999999999999999999999999999999877543 7999999999999987 89999999999
Q ss_pred EEEecChhHHhccCCcHHHHHHHh
Q 000503 1433 LVEQGNPQTLLQDECSVFSSFVRA 1456 (1459)
Q Consensus 1433 IvE~G~p~eLl~~~~~~f~~l~~~ 1456 (1459)
|||.|+.+++.+++...|.+..-+
T Consensus 508 iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 508 IVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred EEEeCCHHHHhcCCCChHHHHHHH
Confidence 999999999999988888776544
No 43
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.9e-66 Score=652.49 Aligned_cols=524 Identities=19% Similarity=0.223 Sum_probs=405.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000503 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1459)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1459)
++.++........++.++...|.............+..+++++.++..++.+++.+.....+.+....++.++++++++.
T Consensus 13 ~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~ 92 (544)
T TIGR01842 13 LFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFSA 92 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33444455555566666665553211111112233445555566667778888888888899999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhhchhhH-HHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPF-ILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1064 (1459)
Q Consensus 986 p~~ff~~~~~G~ilnrfs~D~~~id~~l~~-~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr 1064 (1459)
|+.. .+...+++++|++.+.+.+.. .+..++..++.++. ++++.+.+|++.++++....++..+.....+..+
T Consensus 93 ~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~~ 166 (544)
T TIGR01842 93 TLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIY-LLVCFLLHPWIGILALGGAVVLVGLALLNNRATK 166 (544)
T ss_pred cccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 9842 366789999999999876655 34444444443333 3445566666554433222222223333333333
Q ss_pred HHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000503 1065 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATM- 1143 (1459)
Q Consensus 1065 ~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~- 1143 (1459)
...+...+..+...+++.|+++|+++||+|+.|+.+.+++.+..++..+..+.......+.......+..+...++..+
T Consensus 167 ~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 246 (544)
T TIGR01842 167 KPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGLG 246 (544)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444566677889999999999999999999999999988888776665544444333333333222111111111
Q ss_pred HHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccE
Q 000503 1144 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLI 1223 (1459)
Q Consensus 1144 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I 1223 (1459)
.... ..+..++|.+..++.+...+..++..+...+.++.....+.+|+.++++.++|..... .. -+..+.|
T Consensus 247 ~~l~-----~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~---~~~~~~i 317 (544)
T TIGR01842 247 AYLA-----IDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM-PL---PEPEGHL 317 (544)
T ss_pred HHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC-CC---CCCCCeE
Confidence 1111 1245678888888999999999999999999999999999999999998766532111 11 1235689
Q ss_pred EEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000503 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1459)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1459)
+++||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.|+.+++.+.+|+++++|
T Consensus 318 ~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v 397 (544)
T TIGR01842 318 SVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYL 397 (544)
T ss_pred EEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEe
Confidence 99999999976556799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000503 1304 PQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1380 (1459)
Q Consensus 1304 pQdp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1380 (1459)
||||++|++|+|||+.++++ .+|++++++++.++++++++++ |+||.++|+|.+||||||||++||||++++|+|||
T Consensus 398 ~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ili 477 (544)
T TIGR01842 398 PQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVV 477 (544)
T ss_pred cCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999986654 7899999999999999999999 99999999999999999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhc
Q 000503 1381 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1381 LDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
||||||+||+++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||++
T Consensus 478 lDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 478 LDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred EeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 999999999999999999998875 6899999999999999999999999999999999999976
No 44
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.6e-66 Score=703.13 Aligned_cols=556 Identities=19% Similarity=0.242 Sum_probs=429.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 897 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 976 (1459)
Q Consensus 897 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~ 976 (1459)
.+..+++.+++.++..++....++.+...++... .......+...+++++++..++.+++.+++.+.+.+...+++.
T Consensus 58 ~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~ 134 (1466)
T PTZ00265 58 HRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMN---LGENVNDIIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKL 134 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444555555555555555555554321 1112334455666677778888899999999999999999999
Q ss_pred HHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 977 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1056 (1459)
Q Consensus 977 ~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~ 1056 (1459)
.++++++++|++|||..+.|++.+|++.|++.+...+...+..++..++.+++.++++++.+|.++++++.++.+++.+.
T Consensus 135 ~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~ 214 (1466)
T PTZ00265 135 EFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICG 214 (1466)
T ss_pred HHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888888888888888888888888888877665544444444444
Q ss_pred HHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1057 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFI 1136 (1459)
Q Consensus 1057 ~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~ 1136 (1459)
..+.+..+...+......+...+.+.|+++|+++||+|+.|+.+.++|.+..+...+..+.......+......++..+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 294 (1466)
T PTZ00265 215 VICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGMINGFILAS 294 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444555567788999999999999999999999999998888877776655444433222222222111
Q ss_pred HHHHHHHH-HHhhcCC---CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCC
Q 000503 1137 ISFIATMA-VIGSRGN---LPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQS 1212 (1459)
Q Consensus 1137 ~~~~~~~~-v~~~~~~---~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~ 1212 (1459)
..++..+. .....+. ...+..++|.+...+.+.+.....+..+...+..+..+..|.+|+.+.++.+++.....
T Consensus 295 ~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~~-- 372 (1466)
T PTZ00265 295 YAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVENND-- 372 (1466)
T ss_pred HHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC--
Confidence 11111111 0101110 00112344544434433333344455667778899999999999999998766532111
Q ss_pred CCCCCCCCccEEEEEEEEEecCCC-CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEE-CCEeCCC
Q 000503 1213 LSPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV-DGLNIIN 1290 (1459)
Q Consensus 1213 ~~~~wp~~g~I~f~nVs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~I-DG~di~~ 1290 (1459)
.....|..+.|+|+||+|+|+... .++|+|+||+|++||++||||+||||||||+++|.|+|+|++|+|.+ ||.|+++
T Consensus 373 ~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~ 452 (1466)
T PTZ00265 373 DGKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKD 452 (1466)
T ss_pred CCccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhh
Confidence 111123345799999999997532 46999999999999999999999999999999999999999999999 5799999
Q ss_pred CChHHHhcccEEEeCCCcCCCccHHHhcCcCC------------------------------------------------
Q 000503 1291 TPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH------------------------------------------------ 1322 (1459)
Q Consensus 1291 i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~------------------------------------------------ 1322 (1459)
++.+++|++|++|||+|.+|++||+|||.++.
T Consensus 453 ~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (1466)
T PTZ00265 453 INLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSN 532 (1466)
T ss_pred CCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcccccchh
Confidence 99999999999999999999999999997642
Q ss_pred ----------CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCH
Q 000503 1323 ----------MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDA 1390 (1459)
Q Consensus 1323 ----------~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~ 1390 (1459)
..+|++++++++.+++++++..+ |+||.++++|.+||||||||++|||||+++|+|||||||||+||+
T Consensus 533 ~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~ 612 (1466)
T PTZ00265 533 ELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDN 612 (1466)
T ss_pred hhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCH
Confidence 23578999999999999999988 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCC-------------------------------------
Q 000503 1391 QTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHG------------------------------------- 1431 (1459)
Q Consensus 1391 ~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G------------------------------------- 1431 (1459)
++++.|++.|++.. +++|+|+||||+++++.||+|+||++|
T Consensus 613 ~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1466)
T PTZ00265 613 KSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNN 692 (1466)
T ss_pred HHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccccccccccccccccccccc
Confidence 99999999999875 489999999999999999999999986
Q ss_pred ----------eEEEecChhHHhccCCcHHHHHHHhh
Q 000503 1432 ----------HLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1432 ----------~IvE~G~p~eLl~~~~~~f~~l~~~~ 1457 (1459)
+|+|+|+|+||+++++|.|+.|++.+
T Consensus 693 ~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q 728 (1466)
T PTZ00265 693 NNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQ 728 (1466)
T ss_pred cccccccCCceeEeeCCHHHHHhccCCcHHHHHhhh
Confidence 59999999999987788999999764
No 45
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.4e-68 Score=593.87 Aligned_cols=487 Identities=25% Similarity=0.391 Sum_probs=393.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHH-HHHHHH
Q 000503 962 SFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVL-SYVQVF 1040 (1459)
Q Consensus 962 ~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~-~~~~~~ 1040 (1459)
++...+..+.+.+--+.|.++.+..+.|.-+..+|-+..-......-|+..+-..+.+.+-.++-+....+++ ....||
T Consensus 5 ~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~ 84 (497)
T COG5265 5 LFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWW 84 (497)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccH
Confidence 3445556666677778888899999999888777765444433333344333333433333333332222222 234567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1041 FLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1120 (1459)
Q Consensus 1041 ~~~~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~ 1120 (1459)
++.+.+...++|.++...-..-.-..||.-..+.+..++.-.+++-+.+|+|.|+.|+++..+|.+.++.++++......
T Consensus 85 f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~ 164 (497)
T COG5265 85 FALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHV 164 (497)
T ss_pred HHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHH
Confidence 76666655555544433222222234455555666667778899999999999999999999999999999999888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000503 1121 ASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1200 (1459)
Q Consensus 1121 ~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~ 1200 (1459)
.-.|+++.-..+..........+... ....+..+.|.+...-.+..+++.+++.+-..+.++.++....|+..++.
T Consensus 165 Sl~~Ln~gQ~~I~~~~l~~~m~~s~~----~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl 240 (497)
T COG5265 165 SLLVLNFGQTAIFSTGLRVMMTMSAL----GVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLL 240 (497)
T ss_pred HHHHHHHhhHHHHHHHHHHHHhhcHH----HHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhh
Confidence 77777665444433222211111111 11235567888999999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCC-CCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCc
Q 000503 1201 DVPQEELCGYQSLSPDWP-FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1279 (1459)
Q Consensus 1201 ~~~~e~~~~~~~~~~~wp-~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G 1279 (1459)
+.+.|.... ...++-|| ..|.|.|+||+|.|.+. .++|+|+||++++|+++||||++|+||||+..+|+|||++++|
T Consensus 241 ~~~~~v~d~-pda~~L~~~~~g~v~F~~V~F~y~~~-r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 241 DVEAEVSDA-PDAPPLWPVRLGAVAFINVSFAYDPR-RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred ccchhhccC-CCCccccccccceEEEEEEEeecccc-chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 887765322 22344574 46899999999999876 4699999999999999999999999999999999999999999
Q ss_pred eEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCC
Q 000503 1280 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1356 (1459)
Q Consensus 1280 ~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~ 1356 (1459)
.|.|||.||.++..+.+|+.||+||||.+||++|+..|+.++++ .+++|++.|++.+++.++++++ |+||.|||.|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 99999999999999999999999999999999999999998875 5899999999999999999999 99999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEe
Q 000503 1357 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1436 (1459)
Q Consensus 1357 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~ 1436 (1459)
.||||||||+++||++|++|+||+||||||+||..||+.||..|++..+++|.++|||||+||.++|.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHhccCCcHHHHHHH
Q 000503 1437 GNPQTLLQDECSVFSSFVR 1455 (1459)
Q Consensus 1437 G~p~eLl~~~~~~f~~l~~ 1455 (1459)
|+|+||+++ +|.|++||.
T Consensus 479 g~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred CcHHHHHHc-CChHHHHhc
Confidence 999999997 789999986
No 46
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=8.8e-65 Score=648.14 Aligned_cols=540 Identities=18% Similarity=0.199 Sum_probs=431.7
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 271 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 350 (1459)
Q Consensus 271 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1459)
...++.+++.++..++..++..++..+.|++++.+++.+..+........++.+++++.++..++.....+...+++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 96 (582)
T PRK11176 17 WPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKV 96 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667777777777777777888899999999987654322222222333344455666666666667788889999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000503 351 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNL-ANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 429 (1459)
Q Consensus 351 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~-~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~ 429 (1459)
...+...+|+|.++++.....+.+.|++++.++.|++.+.+. ...+..++..++.+++.+.+++..-++.+++.+++++
T Consensus 97 ~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~ 176 (582)
T PRK11176 97 VMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAP 176 (582)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888899999999999999999874 3445556666666655555444433333343444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 430 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 509 (1459)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 509 (1459)
+.+.+..++.+++++..++.++..++..+...|.++|+++||.+|+|+.+.+++++.-++-.+...+..........+..
T Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (582)
T PRK11176 177 IVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQ 256 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555667788888888999999999999999999999999999999988888877665544544444444333322222
Q ss_pred HHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcC
Q 000503 510 TTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 587 (1459)
Q Consensus 510 ~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 587 (1459)
... ..+.++.++.|.+.++.++++.+.++++++..+..|+..+...+..+.+++.+++|+.++++.++..+...
T Consensus 257 ~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~---- 332 (582)
T PRK11176 257 LIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGK---- 332 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCC----
Confidence 222 23344566777777889999999999999999999999999999999999999999999997654321100
Q ss_pred CCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeE
Q 000503 588 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 667 (1459)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~ 667 (1459)
.. .+.....++++|++|+|++. + +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+
T Consensus 333 ~~---------~~~~~~~i~~~~vsf~y~~~-~---~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~ 399 (582)
T PRK11176 333 RV---------IERAKGDIEFRNVTFTYPGK-E---VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGE 399 (582)
T ss_pred cC---------CCCCCCeEEEEEEEEecCCC-C---CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCce
Confidence 00 01123469999999999643 1 24599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------cEEEEcCCCCCCCCCHHHHhccCC--CCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCc
Q 000503 668 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1459)
Q Consensus 668 i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 732 (1459)
|.++| .|+||||+|.+|++||||||.+|+ ++++++++++++.++++++++.+|+|++|.+|++|.
T Consensus 400 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~ 479 (582)
T PRK11176 400 ILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGV 479 (582)
T ss_pred EEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCC
Confidence 99987 589999999999999999999985 378999999999999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000503 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1459)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~ 812 (1459)
+||||||||++||||++++|+|++|||||||||+++++.+++. +.. +.+++|+|+||||++.++.||+|++|++|+++
T Consensus 480 ~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~-l~~-~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~ 557 (582)
T PRK11176 480 LLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAA-LDE-LQKNRTSLVIAHRLSTIEKADEILVVEDGEIV 557 (582)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999887 333 44679999999999999999999999999999
Q ss_pred EecCHHHHHhccccCcc
Q 000503 813 WIGSSADLAVSLYSGFW 829 (1459)
Q Consensus 813 ~~g~~~~l~~~~~~~~~ 829 (1459)
+.|+++++++..+.+.+
T Consensus 558 e~g~~~~l~~~~~~y~~ 574 (582)
T PRK11176 558 ERGTHAELLAQNGVYAQ 574 (582)
T ss_pred EeCCHHHHHhCCChHHH
Confidence 99999999876654443
No 47
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.9e-64 Score=644.36 Aligned_cols=535 Identities=20% Similarity=0.229 Sum_probs=439.5
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 271 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 350 (1459)
Q Consensus 271 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1459)
..+++.+++.++...++.++..++...+|++++.+++...........+.++++++++.++..++.....+...+.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 85 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKV 85 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778888888889999999999999999999986544332223333344455566667777777778888999999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000503 351 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 429 (1459)
Q Consensus 351 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~ 429 (1459)
...+...+|+|.++.+.+...+.+.|++.+.++.|++++.+... .+..++...+.+++++.+++..-++.+++.+++++
T Consensus 86 ~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~ 165 (571)
T TIGR02203 86 VRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLP 165 (571)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999888888999999999999999987553 45555555555555544444433333444444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 430 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 509 (1459)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 509 (1459)
+.+.+..++.++.++..++..+..+++.+.+.|.++|+++||.++.|+.+.+++++..++..+...+..........+..
T Consensus 166 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (571)
T TIGR02203 166 VLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQ 245 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566778888888999999999999999999999999999999999999888888776666655555444444333322
Q ss_pred HHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcC
Q 000503 510 TTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 587 (1459)
Q Consensus 510 ~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 587 (1459)
.... .+.++.+|.+.+.++.+|++.+++++.++..+..|+..+...+..+.+++++++|+.++++.++..+...
T Consensus 246 ~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~---- 321 (571)
T TIGR02203 246 LIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGT---- 321 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC----
Confidence 2222 2345667778888899999999999999999999999999999999999999999999997654322100
Q ss_pred CCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeE
Q 000503 588 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 667 (1459)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~ 667 (1459)
.+. ......++++|++|+|++.+ +++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+
T Consensus 322 ~~~---------~~~~~~i~~~~v~f~y~~~~----~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~ 388 (571)
T TIGR02203 322 RAI---------ERARGDVEFRNVTFRYPGRD----RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQ 388 (571)
T ss_pred CCC---------CCCCCeEEEEEEEEEcCCCC----CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCe
Confidence 000 11234699999999997532 24599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------cEEEEcCCCCCCCCCHHHHhccCC--CCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCc
Q 000503 668 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1459)
Q Consensus 668 i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 732 (1459)
|.++| .|+||||+|++|++||||||.++. +.++++..++++.|++++++..+|+|.+|.+|++|.
T Consensus 389 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~ 468 (571)
T TIGR02203 389 ILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGV 468 (571)
T ss_pred EEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCC
Confidence 99987 499999999999999999999985 588999999999999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000503 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1459)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~ 812 (1459)
+||||||||++||||++++|+|++||||||+||+++++++.+. +.. ..+++|+|+|||+.+.++.||+|++|++|+++
T Consensus 469 ~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~-L~~-~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~ 546 (571)
T TIGR02203 469 LLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAA-LER-LMQGRTTLVIAHRLSTIEKADRIVVMDDGRIV 546 (571)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHH-HhCCCEEEEEehhhHHHHhCCEEEEEeCCEEE
Confidence 9999999999999999999999999999999999999999887 443 45689999999999999999999999999999
Q ss_pred EecCHHHHHhcc
Q 000503 813 WIGSSADLAVSL 824 (1459)
Q Consensus 813 ~~g~~~~l~~~~ 824 (1459)
+.|+++++.+..
T Consensus 547 ~~g~~~~l~~~~ 558 (571)
T TIGR02203 547 ERGTHNELLARN 558 (571)
T ss_pred eeCCHHHHHHcC
Confidence 999999997654
No 48
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-66 Score=657.83 Aligned_cols=491 Identities=22% Similarity=0.309 Sum_probs=354.6
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|+++.|..... ..++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 11 ~~l~v~~l~~~y~~~~~--~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~ 88 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQ--KIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVI 88 (623)
T ss_pred ceEEEeceEEEecCCCC--ceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccc
Confidence 46899999999863211 12469999999999999999999999999999999999999999987643
Q ss_pred ----------------cEEEEcCCC--CCCC-CCHHHHhccCC----CCCH----HHHHHHHHHhcchhhHhhccCCCcc
Q 000503 673 ----------------SIAYVPQVP--WILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMA 725 (1459)
Q Consensus 673 ----------------~i~y~~Q~~--~l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~~~~gd~t 725 (1459)
.||||+|+| -++. .||+|||.++. ..+. ++..++++..++... ..
T Consensus 89 ~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~--------~~ 160 (623)
T PRK10261 89 ELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA--------QT 160 (623)
T ss_pred ccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------hh
Confidence 489999998 4554 59999998752 1222 234445555555210 11
Q ss_pred cccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhc-CCEE
Q 000503 726 YIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMV 803 (1459)
Q Consensus 726 ~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~~-~d~i 803 (1459)
.......+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+. +.... ..|+|+|+|||+++.+.. ||+|
T Consensus 161 ~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~l-l~~l~~~~g~tvi~itHdl~~~~~~adri 239 (623)
T PRK10261 161 ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQL-IKVLQKEMSMGVIFITHDMGVVAEIADRV 239 (623)
T ss_pred HHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEE
Confidence 23456679999999999999999999999999999999999998888875 33311 237899999999999865 9999
Q ss_pred EEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhccc
Q 000503 804 VVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGR 883 (1459)
Q Consensus 804 ~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~ 883 (1459)
++|++|++++.|+++++..... +. . ..
T Consensus 240 ~vl~~G~i~~~g~~~~~~~~~~-------------~~-------------~---------------~~------------ 266 (623)
T PRK10261 240 LVMYQGEAVETGSVEQIFHAPQ-------------HP-------------Y---------------TR------------ 266 (623)
T ss_pred EEeeCCeecccCCHHHhhcCCC-------------Ch-------------h---------------hh------------
Confidence 9999999999888776531100 00 0 00
Q ss_pred chHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 884 VELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSF 963 (1459)
Q Consensus 884 v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~ 963 (1459)
.++. ..+. +..+.
T Consensus 267 -------~l~~---------------------~~~~--~~~~~------------------------------------- 279 (623)
T PRK10261 267 -------ALLA---------------------AVPQ--LGAMK------------------------------------- 279 (623)
T ss_pred -------hhhh---------------------ccCc--ccccc-------------------------------------
Confidence 0000 0000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHH
Q 000503 964 AFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLL 1043 (1459)
Q Consensus 964 ~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~ 1043 (1459)
|+ ..+
T Consensus 280 --------------------------------~~--------------~~~----------------------------- 284 (623)
T PRK10261 280 --------------------------------GL--------------DYP----------------------------- 284 (623)
T ss_pred --------------------------------cc--------------cCC-----------------------------
Confidence 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1044 LLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASL 1123 (1459)
Q Consensus 1044 ~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1123 (1459)
.+-|.. +
T Consensus 285 -----------------------------~~~~~~----~---------------------------------------- 291 (623)
T PRK10261 285 -----------------------------RRFPLI----S---------------------------------------- 291 (623)
T ss_pred -----------------------------cccccc----c----------------------------------------
Confidence 000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 000503 1124 WLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVP 1203 (1459)
Q Consensus 1124 wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~ 1203 (1459)
. .. ... ..+
T Consensus 292 ---------------------~-----~~-~~~--------------------------------------------~~~ 300 (623)
T PRK10261 292 ---------------------L-----EH-PAK--------------------------------------------QEP 300 (623)
T ss_pred ---------------------c-----cc-ccc--------------------------------------------cCc
Confidence 0 00 000 000
Q ss_pred ccccccCCCCCCCCCCCccEEEEEEEEEecCC---------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccC
Q 000503 1204 QEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT 1274 (1459)
Q Consensus 1204 ~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~ 1274 (1459)
.+.. ...+ +....++++|++++|+.. ...+|+|+||+|++||++||+|+||||||||+++|.|+.
T Consensus 301 ~~~~---~~~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~ 374 (623)
T PRK10261 301 PIEQ---DTVV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLV 374 (623)
T ss_pred cccc---cccc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCC
Confidence 0000 0000 011259999999999621 135899999999999999999999999999999999999
Q ss_pred CCCCceEEECCEeCCCCChH---HHhcccEEEeCCCc--CCCc-cHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHh
Q 000503 1275 PICGGQILVDGLNIINTPVR---DLRGRFAVVPQSPF--LFEG-SLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEA 1344 (1459)
Q Consensus 1275 ~~~~G~I~IDG~di~~i~~~---~lR~~i~~VpQdp~--lf~g-TIReNLdp~----~~~~d~ei~~aL~~~~l~~~i~~ 1344 (1459)
+|++|+|.+||.++...+.. .+|++++||||+|. +++. |+++|+... +....++. +....+.++.
T Consensus 375 ~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~~L~~ 449 (623)
T PRK10261 375 ESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAA-----AARVAWLLER 449 (623)
T ss_pred CCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHH-----HHHHHHHHHH
Confidence 99999999999999877643 46788999999983 6654 999998531 11111111 1122344455
Q ss_pred CCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh
Q 000503 1345 VGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN 1421 (1459)
Q Consensus 1345 lGLd-t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~ 1421 (1459)
+|++ .........||||||||++|||||+.+|+||||||||++||..+.+.+.+.|++.. .+.|||+|||+++.+..
T Consensus 450 ~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~ 529 (623)
T PRK10261 450 VGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVER 529 (623)
T ss_pred cCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 5775 34556667899999999999999999999999999999999999999999998764 27899999999999976
Q ss_pred -cCEEEEEeCCeEEEecChhHHhccCCcHHH-HHHH
Q 000503 1422 -MDEILILDHGHLVEQGNPQTLLQDECSVFS-SFVR 1455 (1459)
Q Consensus 1422 -~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~-~l~~ 1455 (1459)
||||++|++|+|+|.|+++++..++...|. .++.
T Consensus 530 ~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 530 ISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred hCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHh
Confidence 899999999999999999999877655454 3443
No 49
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.4e-63 Score=637.31 Aligned_cols=532 Identities=18% Similarity=0.218 Sum_probs=415.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLD--GYVLAIALGLTSILKSFFDTQYSFHLSKLKLK 349 (1459)
Q Consensus 272 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~--g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 349 (1459)
..++.+++.++...++.++..++..+.|+++..++|.+..+.+... ...+++++++..++..++.....+...+.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (592)
T PRK10790 16 AYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVG 95 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667777777888899999999999999999997644222111 12223334455556667777777788889999
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHH---HHHhHHHHHHHH
Q 000503 350 LRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYLL---YTQVKFAFVSGL 425 (1459)
Q Consensus 350 ~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~p~~i~i~~~lL---~~~lg~a~l~~~ 425 (1459)
+...+...+|+|.++.+...+.+.+.|+++|.++.|++.+.+.... +..+....+.+++++.++ .+.+++..+++
T Consensus 96 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~- 174 (592)
T PRK10790 96 VVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMI- 174 (592)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999998888899999999999999999875443 333433333333332222 22333332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000503 426 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC- 504 (1459)
Q Consensus 426 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~- 504 (1459)
+++.+.+..+..++..+..++..+..++..+...|.++|+++||.++.|+.+.+++.+..++..+...+........
T Consensus 175 --~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (592)
T PRK10790 175 --FPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLL 252 (592)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223344555666677777777888888899999999999999999999999888877655444433332222211
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchh
Q 000503 505 ---VFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 581 (1459)
Q Consensus 505 ---~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~ 581 (1459)
..+......+..++ ++.+ +..+.++.+.+++++.++..+..|+..++..+..+.++..+.+||.++++.++.+..
T Consensus 253 ~~~~~~~~~~~~~~~~~-~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 330 (592)
T PRK10790 253 RPLLSLFSALILCGLLM-LFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG 330 (592)
T ss_pred HHHHHHHHHHHHHHHHH-HHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC
Confidence 11111111111122 2223 457789999999999999999999999999999999999999999999975432110
Q ss_pred hhhhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000503 582 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 661 (1459)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~ 661 (1459)
.. .. ......++++|++|+|+.+ . ++|+|+||++++||.++|+|+||||||||+++|+|++
T Consensus 331 ~~-----~~---------~~~~~~i~~~~v~f~y~~~--~---~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~ 391 (592)
T PRK10790 331 ND-----DR---------PLQSGRIDIDNVSFAYRDD--N---LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYY 391 (592)
T ss_pred CC-----cc---------CCCCCeEEEEEEEEEeCCC--C---ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhccc
Confidence 00 00 1123469999999999732 2 3599999999999999999999999999999999999
Q ss_pred cCCCeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCccccc
Q 000503 662 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIG 728 (1459)
Q Consensus 662 ~~~~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig 728 (1459)
+|++|+|.++| .|+||||+|++|++||||||.+|++.++++..++++.++++++++.+|+|++|.+|
T Consensus 392 ~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~ 471 (592)
T PRK10790 392 PLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLG 471 (592)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhcccccccccc
Confidence 99999999987 49999999999999999999999988999999999999999999999999999999
Q ss_pred CCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeC
Q 000503 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 808 (1459)
Q Consensus 729 ~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~ 808 (1459)
++|.+||||||||++||||++++|+|+|||||||+||++++++|.+. +.. ..+++|+|+||||++.++.||+|++|++
T Consensus 472 e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~-l~~-~~~~~tvIivtHr~~~l~~~D~ii~l~~ 549 (592)
T PRK10790 472 EQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQA-LAA-VREHTTLVVIAHRLSTIVEADTILVLHR 549 (592)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999887 433 4467999999999999999999999999
Q ss_pred CeEEEecCHHHHHhccccCcc
Q 000503 809 GQVKWIGSSADLAVSLYSGFW 829 (1459)
Q Consensus 809 G~i~~~g~~~~l~~~~~~~~~ 829 (1459)
|++++.|+++|+++..+.+..
T Consensus 550 G~i~~~G~~~~L~~~~~~y~~ 570 (592)
T PRK10790 550 GQAVEQGTHQQLLAAQGRYWQ 570 (592)
T ss_pred CEEEEEcCHHHHHhCCCHHHH
Confidence 999999999999876655443
No 50
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.2e-63 Score=630.12 Aligned_cols=504 Identities=20% Similarity=0.182 Sum_probs=392.4
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 351 (1459)
Q Consensus 272 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r 351 (1459)
.+.+.+++.++...++.++..++..+.|++++.++|.+.........+.+.++++++.++..++.....+...+.+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSL 85 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677777788888899999999999999999876542221111111222223445566666666677788889999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHH
Q 000503 352 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYL---LYTQVKFAFVSGLAI 427 (1459)
Q Consensus 352 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~l---L~~~lg~a~l~~~~v 427 (1459)
..+...+|+|.++++...+++.++|++++.++.|++++.+... .+..+....+.+++++.+ +.+.+++.++++++
T Consensus 86 ~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~- 164 (529)
T TIGR02868 86 GRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLL- 164 (529)
T ss_pred HHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-
Confidence 9999999999999999999899999999999999999987654 344444444443333333 23333333333222
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 428 TILLIPVN-KWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 506 (1459)
Q Consensus 428 ~~~~~~~~-~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 506 (1459)
++.++. .+..+..++..++..+..++..+...|.++|+++||.+++|+.+.+++++..++..+...+.....+....
T Consensus 165 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (529)
T TIGR02868 165 --LAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAA 242 (529)
T ss_pred --HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222 23334345566777888899999999999999999999999999999988776666665555555544433
Q ss_pred HHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhh
Q 000503 507 FWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 584 (1459)
Q Consensus 507 ~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 584 (1459)
+...... .+.++.+|.|.+.++.++++.+.+.+.+...+..|+..++..+..+.++.++.+|+.++++.++..+....
T Consensus 243 ~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 322 (529)
T TIGR02868 243 AQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVV 322 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCC
Confidence 3322222 23345677788888899999999999999999999999999999999999999999999976543211000
Q ss_pred hcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000503 585 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 664 (1459)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~ 664 (1459)
..+. ........++++|++|+|+++ + ++|+|+||++++||+++|+||||||||||+++|+|+++|+
T Consensus 323 --~~~~-------~~~~~~~~I~~~~vsf~Y~~~--~---~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~ 388 (529)
T TIGR02868 323 --PAAG-------ALGLGKPTLELRDLSFGYPGS--P---PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPL 388 (529)
T ss_pred --CCCc-------ccCCCCceEEEEEEEEecCCC--C---ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 0000 001123469999999999742 2 3599999999999999999999999999999999999999
Q ss_pred CeEEEEcC------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCC
Q 000503 665 HGSIHASG------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKG 731 (1459)
Q Consensus 665 ~G~i~~~~------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g 731 (1459)
+|+|.++| .||||||+|++|++||||||.+|.+ .+++++.++++.|+++++++.+|+|++|.+||+|
T Consensus 389 ~G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 468 (529)
T TIGR02868 389 QGEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGG 468 (529)
T ss_pred CcEEEECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhcccc
Confidence 99999998 7999999999999999999999864 6889999999999999999999999999999999
Q ss_pred cccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCc
Q 000503 732 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNV 794 (1459)
Q Consensus 732 ~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~ 794 (1459)
.+||||||||++||||++++|+|++||||||+||+++++.|.+.+ .. ..+++|+|+||||+
T Consensus 469 ~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l-~~-~~~~~TvIiItHrl 529 (529)
T TIGR02868 469 ARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDL-LA-ALSGKTVVVITHHL 529 (529)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HH-hcCCCEEEEEecCC
Confidence 999999999999999999999999999999999999999999884 33 56789999999985
No 51
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2e-63 Score=635.38 Aligned_cols=541 Identities=18% Similarity=0.216 Sum_probs=425.8
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1459)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 348 (1459)
.++.+++.+++.+....++.++..++.++.|++++.++|.+-.+.+......+++.++++.++..++...+.+...+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (576)
T TIGR02204 8 ALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGE 87 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566777788888888999999999999999999974322222222223333444445555666667788889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHH
Q 000503 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVAL-YLLYTQVKFAFVSGLA 426 (1459)
Q Consensus 349 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~p~~i~i~~-~lL~~~lg~a~l~~~~ 426 (1459)
++...+...+|+|.++.+.....+.+.|++.+.++.|++.+.+.. ..+..++...+.+++++ ++++....++.++. +
T Consensus 88 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-~ 166 (576)
T TIGR02204 88 RVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVL-L 166 (576)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-H
Confidence 999999999999999999988888889999999999999998764 33444444444433333 23322222222222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 427 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 506 (1459)
Q Consensus 427 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 506 (1459)
.+++.+.+..++.+++++..+++++..++..+...|.++|+++||.+++|+.+.+++++..++..+...+......+...
T Consensus 167 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (576)
T TIGR02204 167 AVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTA 246 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233334456778888899999999999999999999999999999999998888888766555554444433333222
Q ss_pred HHHHH--HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhh
Q 000503 507 FWATT--PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 584 (1459)
Q Consensus 507 ~~~~~--~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 584 (1459)
+.... ...+.++.+|+|.+..+.+|++.++++..+...+..|+..++..+..+.+++.+++||.++++.++..+....
T Consensus 247 ~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 326 (576)
T TIGR02204 247 IVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAH 326 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCC
Confidence 22111 2233455677888888899999999999999999999999999999999999999999999976532110000
Q ss_pred hcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000503 585 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 664 (1459)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~ 664 (1459)
. ...+ ......++++|++|+|+.+++ +++|+|+||+++|||.++|+|+||||||||+++|+|+++|+
T Consensus 327 ~-~~~~---------~~~~~~i~~~~v~f~y~~~~~---~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~ 393 (576)
T TIGR02204 327 P-KTLP---------VPLRGEIEFEQVNFAYPARPD---QPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ 393 (576)
T ss_pred C-ccCC---------cCCCceEEEEEEEEECCCCCC---CccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC
Confidence 0 0000 012346999999999975322 34599999999999999999999999999999999999999
Q ss_pred CeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCC
Q 000503 665 HGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1459)
Q Consensus 665 ~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~ 730 (1459)
+|+|.++| .|+||||+|++|++||||||.++.+ .++++..++++.+++.++++.+|+|++|.+|++
T Consensus 394 ~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~ 473 (576)
T TIGR02204 394 SGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGER 473 (576)
T ss_pred CCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCC
Confidence 99999987 5999999999999999999999874 577889999999999999999999999999999
Q ss_pred CcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000503 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1459)
Q Consensus 731 g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~ 810 (1459)
|.+||||||||++||||++++|++++||||||+||+++++.+++. +.. ..+++|+|+|||+.+.++.+|+|++|++|+
T Consensus 474 g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~-l~~-~~~~~t~IiitH~~~~~~~~d~vi~l~~g~ 551 (576)
T TIGR02204 474 GVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQA-LET-LMKGRTTLIIAHRLATVLKADRIVVMDQGR 551 (576)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999988876 443 456899999999999999999999999999
Q ss_pred EEEecCHHHHHhccc
Q 000503 811 VKWIGSSADLAVSLY 825 (1459)
Q Consensus 811 i~~~g~~~~l~~~~~ 825 (1459)
+++.|+++++.++.+
T Consensus 552 ~~~~g~~~~l~~~~~ 566 (576)
T TIGR02204 552 IVAQGTHAELIAKGG 566 (576)
T ss_pred EEeeecHHHHHHcCC
Confidence 999999999876543
No 52
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.4e-63 Score=641.65 Aligned_cols=541 Identities=19% Similarity=0.214 Sum_probs=439.5
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1459)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 348 (1459)
.++..++.+++.+...++..++..++.++.|++++.++|.+-...+....+.++++++++.++..++.....+...+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 208 (694)
T TIGR01846 129 WFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTS 208 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566777788888899999999999999999999987543333344455566666777788888888889999999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000503 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 427 (1459)
Q Consensus 349 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v 427 (1459)
++...+...+|+|.++++...+++.++|++++.+ .|++.+.++.. .+..+....+.+++.+.+++..-++.+++.+++
T Consensus 209 ~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~ 287 (694)
T TIGR01846 209 RIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGS 287 (694)
T ss_pred HHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 59999987643 333333222222222333333333333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 428 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFF 507 (1459)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~ 507 (1459)
+++...+..++.+++++..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++++..++..+...+..........+
T Consensus 288 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (694)
T TIGR01846 288 LVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQA 367 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455556677788888888899999999999999999999999999999999998887766666666555555444333
Q ss_pred HHHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhh
Q 000503 508 WATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQA 585 (1459)
Q Consensus 508 ~~~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~ 585 (1459)
..... ..+.++++|+|.+.++.+|.|.++++..+...+..|+..+...+..+.+++++++|+.++++.++..+.. .
T Consensus 368 ~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-~- 445 (694)
T TIGR01846 368 IELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA-G- 445 (694)
T ss_pred HHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC-C-
Confidence 32222 2234567888888888999999999999999999999999999999999999999999999765432110 0
Q ss_pred cCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC
Q 000503 586 ANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH 665 (1459)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~ 665 (1459)
... .+.....++++|++|+|+++. +++|+|+||++++|+.++|+|+||||||||+++|+|+++|++
T Consensus 446 --~~~--------~~~~~~~i~~~~vsf~y~~~~----~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~ 511 (694)
T TIGR01846 446 --LAA--------LPELRGAITFENIRFRYAPDS----PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQH 511 (694)
T ss_pred --CCC--------CCCCCCeEEEEEEEEEcCCCC----ccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 000 012235699999999997432 235999999999999999999999999999999999999999
Q ss_pred eEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCC-CCCHHHHHHHHHHhcchhhHhhccCCCcccccCCC
Q 000503 666 GSIHASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKG 731 (1459)
Q Consensus 666 G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g 731 (1459)
|+|.++| .|+||+|+|++|++||+|||.++. ..++++..++++.++++++++.+|+|.+|.+|++|
T Consensus 512 G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g 591 (694)
T TIGR01846 512 GQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKG 591 (694)
T ss_pred ceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCC
Confidence 9999987 489999999999999999999976 46788999999999999999999999999999999
Q ss_pred cccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeE
Q 000503 732 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 811 (1459)
Q Consensus 732 ~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i 811 (1459)
.+||||||||++||||++++|+|+|||||||+||+++++.+.+. +.. ..+++|+|++||+++.++.||+|++|++|++
T Consensus 592 ~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~-~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i 669 (694)
T TIGR01846 592 ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRN-MRE-ICRGRTVIIIAHRLSTVRACDRIIVLEKGQI 669 (694)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHH-HhCCCEEEEEeCChHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999887 333 4568999999999999999999999999999
Q ss_pred EEecCHHHHHhccccCc
Q 000503 812 KWIGSSADLAVSLYSGF 828 (1459)
Q Consensus 812 ~~~g~~~~l~~~~~~~~ 828 (1459)
+++|+++++.+..+.+.
T Consensus 670 ~~~g~~~~l~~~~~~y~ 686 (694)
T TIGR01846 670 AESGRHEELLALQGLYA 686 (694)
T ss_pred EEeCCHHHHHHcCChHH
Confidence 99999999987655443
No 53
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.3e-65 Score=641.28 Aligned_cols=455 Identities=26% Similarity=0.350 Sum_probs=344.9
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC-------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 672 (1459)
.++++|+++.|+... ...++|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~--~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 82 (529)
T PRK15134 5 LLAIENLSVAFRQQQ--TVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHAS 82 (529)
T ss_pred eEEEeceEEEecCCC--CceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCC
Confidence 478999999986321 112469999999999999999999999999999999999986 799998754
Q ss_pred ----------cEEEEcCCCC--CCC-CCHHHHhccCC----CCCH----HHHHHHHHHhcchhhHhhccCCCcccccCCC
Q 000503 673 ----------SIAYVPQVPW--ILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKG 731 (1459)
Q Consensus 673 ----------~i~y~~Q~~~--l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g 731 (1459)
.++|++|+|. ++. .|+++|+.++. ..+. ++..++++.+++.+.. .......
T Consensus 83 ~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~ 154 (529)
T PRK15134 83 EQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYP 154 (529)
T ss_pred HHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCC
Confidence 3899999985 443 59999986421 1222 3445566666664211 0123456
Q ss_pred cccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCC
Q 000503 732 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKG 809 (1459)
Q Consensus 732 ~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~-~d~i~~l~~G 809 (1459)
.+|||||||||+||||++.+|+++||||||++||+...+++.+. +..... .++|+|+|||+++.+.. ||+|++|++|
T Consensus 155 ~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G 233 (529)
T PRK15134 155 HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQL-LRELQQELNMGLLFITHNLSIVRKLADRVAVMQNG 233 (529)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHH-HHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECC
Confidence 69999999999999999999999999999999999999988875 332112 37899999999998875 9999999999
Q ss_pred eEEEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHH
Q 000503 810 QVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVY 889 (1459)
Q Consensus 810 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 889 (1459)
++++.|+++++..... . .
T Consensus 234 ~i~~~g~~~~~~~~~~--------------------------------------------------------~--~---- 251 (529)
T PRK15134 234 RCVEQNRAATLFSAPT--------------------------------------------------------H--P---- 251 (529)
T ss_pred EEEEeCCHHHHhhCCC--------------------------------------------------------C--H----
Confidence 9998877655421000 0 0
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 890 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLR 969 (1459)
Q Consensus 890 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 969 (1459)
+.+
T Consensus 252 --~~~--------------------------------------------------------------------------- 254 (529)
T PRK15134 252 --YTQ--------------------------------------------------------------------------- 254 (529)
T ss_pred --HHH---------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHH
Q 000503 970 AAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFW 1049 (1459)
Q Consensus 970 ~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~ 1049 (1459)
T Consensus 255 -------------------------------------------------------------------------------- 254 (529)
T PRK15134 255 -------------------------------------------------------------------------------- 254 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1050 FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL 1129 (1459)
Q Consensus 1050 ~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l 1129 (1459)
++. . .
T Consensus 255 ---------------~~~--~--~-------------------------------------------------------- 259 (529)
T PRK15134 255 ---------------KLL--N--S-------------------------------------------------------- 259 (529)
T ss_pred ---------------HHH--H--h--------------------------------------------------------
Confidence 000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccccc
Q 000503 1130 QLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCG 1209 (1459)
Q Consensus 1130 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~ 1209 (1459)
. ... ++...
T Consensus 260 ---------------------~-~~~-----------------------------------------------~~~~~-- 268 (529)
T PRK15134 260 ---------------------E-PSG-----------------------------------------------DPVPL-- 268 (529)
T ss_pred ---------------------C-ccc-----------------------------------------------ccccc--
Confidence 0 000 00000
Q ss_pred CCCCCCCCCCCccEEEEEEEEEecC---------CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCce
Q 000503 1210 YQSLSPDWPFQGLIEFQNVTMRYKP---------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQ 1280 (1459)
Q Consensus 1210 ~~~~~~~wp~~g~I~f~nVs~~Y~~---------~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~ 1280 (1459)
. ++ ....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ ++|+
T Consensus 269 -~-~~----~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~ 341 (529)
T PRK15134 269 -P-EP----ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGE 341 (529)
T ss_pred -C-CC----CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcE
Confidence 0 00 0114899999999952 12469999999999999999999999999999999999985 8999
Q ss_pred EEECCEeCCCCChHH---HhcccEEEeCCC--cCCC-ccHHHhcCcCCC-----CChHHHHHHHHHhcHHHHHHhCCCc-
Q 000503 1281 ILVDGLNIINTPVRD---LRGRFAVVPQSP--FLFE-GSLRDNLDPFHM-----NDDLKIWSVLEKCHVKEEVEAVGLE- 1348 (1459)
Q Consensus 1281 I~IDG~di~~i~~~~---lR~~i~~VpQdp--~lf~-gTIReNLdp~~~-----~~d~ei~~aL~~~~l~~~i~~lGLd- 1348 (1459)
|.+||.++...+... +|++++||||+| .+|+ .|+++|+..... .+..+. +..+.+.++.+|++
T Consensus 342 i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~ 416 (529)
T PRK15134 342 IWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQR-----EQQVIAVMEEVGLDP 416 (529)
T ss_pred EEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHH-----HHHHHHHHHHcCCCH
Confidence 999999998776543 477899999998 3666 499999964210 111111 11233445555775
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEE
Q 000503 1349 TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEI 1425 (1459)
Q Consensus 1349 t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI 1425 (1459)
........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||
T Consensus 417 ~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i 496 (529)
T PRK15134 417 ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQV 496 (529)
T ss_pred HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeE
Confidence 34566677899999999999999999999999999999999999999999998764 27899999999999876 8999
Q ss_pred EEEeCCeEEEecChhHHhccCC
Q 000503 1426 LILDHGHLVEQGNPQTLLQDEC 1447 (1459)
Q Consensus 1426 lVl~~G~IvE~G~p~eLl~~~~ 1447 (1459)
++|++|++++.|+++++++++.
T Consensus 497 ~~l~~G~i~~~~~~~~~~~~~~ 518 (529)
T PRK15134 497 IVLRQGEVVEQGDCERVFAAPQ 518 (529)
T ss_pred EEEECCEEEEEcCHHHHhcCCC
Confidence 9999999999999999987654
No 54
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-65 Score=638.61 Aligned_cols=448 Identities=23% Similarity=0.315 Sum_probs=339.5
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC--CCeEEEEcC----------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML--THGSIHASG---------- 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~--~~G~i~~~~---------- 672 (1459)
.++++|+++.|.. .++|+|+||++++|++++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~nl~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 78 (506)
T PRK13549 5 LLEMKNITKTFGG------VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRD 78 (506)
T ss_pred eEEEeeeEEEeCC------eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHH
Confidence 4789999998852 2359999999999999999999999999999999999986 899999865
Q ss_pred ----cEEEEcCCCCCCCC-CHHHHhccCCC------CCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcH
Q 000503 673 ----SIAYVPQVPWILSG-TIRDNILFGKN------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1459)
Q Consensus 673 ----~i~y~~Q~~~l~~~-ti~~nI~~g~~------~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 737 (1459)
.++|++|+|.++.. |++||+.++.. .+.+ +.+++++..++.. .......+||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG 147 (506)
T PRK13549 79 TERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDI-----------NPATPVGNLGLG 147 (506)
T ss_pred HHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCC-----------CcccchhhCCHH
Confidence 38999999987764 99999988642 1222 2233333333321 123455789999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecC
Q 000503 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1459)
Q Consensus 738 QkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~ 816 (1459)
|||||+||||+..+|+++||||||++||+...+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|+++..|+
T Consensus 148 qkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 226 (506)
T PRK13549 148 QQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDI-IRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRP 226 (506)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecc
Confidence 99999999999999999999999999999999988875 33312357899999999999875 99999999999987664
Q ss_pred HHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHHHHhhh
Q 000503 817 SADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFS 896 (1459)
Q Consensus 817 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~ 896 (1459)
.+++.. . . ... .+.
T Consensus 227 ~~~~~~-----------------------------------------------------~-~------~~~---~~~--- 240 (506)
T PRK13549 227 AAGMTE-----------------------------------------------------D-D------IIT---MMV--- 240 (506)
T ss_pred cccCCH-----------------------------------------------------H-H------HHH---Hhh---
Confidence 322100 0 0 000 000
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 897 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 976 (1459)
Q Consensus 897 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~ 976 (1459)
.
T Consensus 241 ------------------------------~------------------------------------------------- 241 (506)
T PRK13549 241 ------------------------------G------------------------------------------------- 241 (506)
T ss_pred ------------------------------C-------------------------------------------------
Confidence 0
Q ss_pred HHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 977 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1056 (1459)
Q Consensus 977 ~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~ 1056 (1459)
T Consensus 242 -------------------------------------------------------------------------------- 241 (506)
T PRK13549 242 -------------------------------------------------------------------------------- 241 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1057 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFI 1136 (1459)
Q Consensus 1057 ~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~ 1136 (1459)
+
T Consensus 242 -----------------~-------------------------------------------------------------- 242 (506)
T PRK13549 242 -----------------R-------------------------------------------------------------- 242 (506)
T ss_pred -----------------c--------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCC
Q 000503 1137 ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPD 1216 (1459)
Q Consensus 1137 ~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~ 1216 (1459)
. .. + . .+.+. ++
T Consensus 243 --------------~--~~---------------------------------------~---~--~~~~~------~~-- 254 (506)
T PRK13549 243 --------------E--LT---------------------------------------A---L--YPREP------HT-- 254 (506)
T ss_pred --------------C--cc---------------------------------------c---c--ccccc------cC--
Confidence 0 00 0 0 00000 00
Q ss_pred CCCCccEEEEEEEEEecC-CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-CCCceEEECCEeCCCCCh-
Q 000503 1217 WPFQGLIEFQNVTMRYKP-SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-ICGGQILVDGLNIINTPV- 1293 (1459)
Q Consensus 1217 wp~~g~I~f~nVs~~Y~~-~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-~~~G~I~IDG~di~~i~~- 1293 (1459)
+....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+.
T Consensus 255 -~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~ 333 (506)
T PRK13549 255 -IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQ 333 (506)
T ss_pred -CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHH
Confidence 01124899999999953 23469999999999999999999999999999999999998 599999999999875543
Q ss_pred HHHhcccEEEeCCC---cCCC-ccHHHhcCcCC--CCCh-HHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHH
Q 000503 1294 RDLRGRFAVVPQSP---FLFE-GSLRDNLDPFH--MNDD-LKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQL 1365 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp---~lf~-gTIReNLdp~~--~~~d-~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQr 1365 (1459)
+..|++++|+||+| .+|+ .|+.+|+.... .... ..+...-.+....+.++.+|++. ........||||||||
T Consensus 334 ~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqr 413 (506)
T PRK13549 334 QAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAIARLSGGNQQK 413 (506)
T ss_pred HHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCcccccccCCHHHHHH
Confidence 45677899999997 3565 59999996421 1100 00000001122344555567753 4555667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
++||||++++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. |||+++|++|+++..|+++++.
T Consensus 414 v~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 414 AVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred HHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 999999999999999999999999999999999998753 48899999999999876 8999999999999999998874
No 55
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.6e-62 Score=622.72 Aligned_cols=534 Identities=19% Similarity=0.214 Sum_probs=417.4
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCC---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 273 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSG---HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1459)
Q Consensus 273 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~---~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 348 (1459)
+++.+++.++...++.++..++..+.|.+++.+++... .+.. .......+++++++.++..++.....+...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATF 89 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888899999999999999999998642 2211 0111112333444556677777777788889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH-H--HHHHhHHHHHHH
Q 000503 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY-L--LYTQVKFAFVSG 424 (1459)
Q Consensus 349 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~-l--L~~~lg~a~l~~ 424 (1459)
++...+...+|+|.++++....++.++|++++.++.|++.+..+.. .+..+....+.++++++ + +.+.+++..+++
T Consensus 90 ~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~ 169 (574)
T PRK11160 90 RVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGI 169 (574)
T ss_pred HHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988889999999999999999998654 34445544444433332 2 233333333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1459)
Q Consensus 425 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1459)
+ .++...+..++.++.++..++..+..++..+.+.|.++|+++||.||.|+.+.+++++..++-.+...+.....+..
T Consensus 170 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
T PRK11160 170 L--LLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLS 247 (574)
T ss_pred H--HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22222233556677778888889999999999999999999999999999999888887655555544444444333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchh
Q 000503 505 VFFWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSL-ISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 581 (1459)
Q Consensus 505 ~~~~~~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l-~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~ 581 (1459)
..+..... ..+.++.+|.+. .++.++++.+++++.+..++ ..|+..++..+..+.++.++.+||.++++.++..+.
T Consensus 248 ~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~ 326 (574)
T PRK11160 248 QALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTF 326 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 22222211 223345566666 46779999988877765444 468888999999999999999999999976532110
Q ss_pred hhhhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000503 582 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 661 (1459)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~ 661 (1459)
... .+. ......++++|++|+|++++ +++|+|+||++++|+.++|+||||||||||+++|+|++
T Consensus 327 ~~~---~~~---------~~~~~~i~~~~v~f~y~~~~----~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~ 390 (574)
T PRK11160 327 PTT---STA---------AADQVSLTLNNVSFTYPDQP----QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAW 390 (574)
T ss_pred Ccc---cCC---------CCCCCeEEEEEEEEECCCCC----CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 000 000 11234699999999996431 24599999999999999999999999999999999999
Q ss_pred cCCCeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccc
Q 000503 662 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYI 727 (1459)
Q Consensus 662 ~~~~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~i 727 (1459)
+|++|+|.++| .|+||+|+|++|++||+|||.++.+ .++++..++++.++++++++. |+|++|.+
T Consensus 391 ~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~v 469 (574)
T PRK11160 391 DPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWL 469 (574)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchh
Confidence 99999999987 4999999999999999999999874 688899999999999999999 99999999
Q ss_pred cCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEe
Q 000503 728 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMD 807 (1459)
Q Consensus 728 g~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~ 807 (1459)
||+|.+||||||||++||||++++|++++||||||+||+++++.+.+. +.. ..+++|+|+||||++.++.||+|++|+
T Consensus 470 ge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~-l~~-~~~~~tviiitHr~~~~~~~d~i~~l~ 547 (574)
T PRK11160 470 GEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILEL-LAE-HAQNKTVLMITHRLTGLEQFDRICVMD 547 (574)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecChhHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999999887 433 456899999999999999999999999
Q ss_pred CCeEEEecCHHHHHhccccCc
Q 000503 808 KGQVKWIGSSADLAVSLYSGF 828 (1459)
Q Consensus 808 ~G~i~~~g~~~~l~~~~~~~~ 828 (1459)
+|++++.|+++|++++++.+.
T Consensus 548 ~G~i~~~g~~~~l~~~~g~y~ 568 (574)
T PRK11160 548 NGQIIEQGTHQELLAQQGRYY 568 (574)
T ss_pred CCeEEEeCCHHHHHhcCcHHH
Confidence 999999999999987765543
No 56
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.6e-62 Score=620.58 Aligned_cols=520 Identities=19% Similarity=0.224 Sum_probs=416.0
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 276 AYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIM 355 (1459)
Q Consensus 276 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~ 355 (1459)
.+++.++..+++.++..++..+.|++++.++|.+....+....+.+++.++++.++.+++.....+...+.+.++...+.
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777888889999999999999999999764322223334455566666777888888888889999999999999
Q ss_pred HHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHH
Q 000503 356 TIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVA--LYLLYTQVKFAFVSGLAITILL 431 (1459)
Q Consensus 356 ~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~p~~i~i~--~~lL~~~lg~a~l~~~~v~~~~ 431 (1459)
..+|+|.++++... .+...+..+.|++++.+.... +..+...++.++.. ++.+.+.+++.++++++ +.
T Consensus 83 ~~~~~~ll~~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~---l~ 154 (544)
T TIGR01842 83 QPIFAASFSATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVCFLLHPWIGILALGGAV---VL 154 (544)
T ss_pred HHHHHHHhcCcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH---HH
Confidence 99999999998732 245667788999999876542 33444444443332 33333344443333322 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 432 IPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATT 511 (1459)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~ 511 (1459)
+.+..+..++.++..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++..++..+...+.....+....+....
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566777788889999999999999999999999999999999999988877666665555444444333322222
Q ss_pred H--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCC
Q 000503 512 P--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSP 589 (1459)
Q Consensus 512 ~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~ 589 (1459)
. ..+.++++|.|.+.++.+|+|.+++++.++..+..|+..+...+..+.+++.+.+||.++++.++..+.. .+
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-----~~ 309 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA-----MP 309 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC-----CC
Confidence 1 2234566888888889999999999999999999999999999999999999999999999754422110 00
Q ss_pred CcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEE
Q 000503 590 SYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIH 669 (1459)
Q Consensus 590 ~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~ 669 (1459)
. +..+..++++|++|+|+..+ +++|+|+||++++|+.++|+||||||||||+++|+|+++|++|+|.
T Consensus 310 ~---------~~~~~~i~~~~v~~~y~~~~----~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~ 376 (544)
T TIGR01842 310 L---------PEPEGHLSVENVTIVPPGGK----KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVR 376 (544)
T ss_pred C---------CCCCCeEEEEEEEEEcCCCC----ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE
Confidence 0 11234699999999996421 2459999999999999999999999999999999999999999999
Q ss_pred EcC-------------cEEEEcCCCCCCCCCHHHHhccCC-CCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccC
Q 000503 670 ASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1459)
Q Consensus 670 ~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 735 (1459)
++| .++||||+|++|++|++|||.++. +.+++++.++++.+++++.++.+|+|++|.+|++|.+||
T Consensus 377 ~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LS 456 (544)
T TIGR01842 377 LDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLS 456 (544)
T ss_pred ECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCC
Confidence 986 599999999999999999998655 478889999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEec
Q 000503 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 736 GGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g 815 (1459)
||||||++||||++++|+++|||||||+||+++++.+.+. +.....+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 457 gGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g 535 (544)
T TIGR01842 457 GGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANA-IKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFG 535 (544)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHH-HHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeC
Confidence 9999999999999999999999999999999999998886 333123578999999999999899999999999999999
Q ss_pred CHHHHHh
Q 000503 816 SSADLAV 822 (1459)
Q Consensus 816 ~~~~l~~ 822 (1459)
+++++.+
T Consensus 536 ~~~~l~~ 542 (544)
T TIGR01842 536 ERDEVLA 542 (544)
T ss_pred CHHHHhh
Confidence 9998864
No 57
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.2e-62 Score=625.33 Aligned_cols=533 Identities=19% Similarity=0.215 Sum_probs=413.9
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 273 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRS 352 (1459)
Q Consensus 273 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~ 352 (1459)
.++.++..+...++..++..++.++.|+++..++|.+..+.. .+ .+++.++++.++..+......+...+...+++.
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKGD--IF-PLLAAWAGFGLFNIIAGVLVARHADRLAHRRRL 89 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566677778888899999999999999999998764321 11 112222222333333344445566778888888
Q ss_pred HHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHH
Q 000503 353 SIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVAL---YLLYTQVKFAFVSGLAIT 428 (1459)
Q Consensus 353 ~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~p~~i~i~~---~lL~~~lg~a~l~~~~v~ 428 (1459)
.+...+|+|.++++.....+.+.|++++.++.|++.+.... ..+..+....+..++.+ +.+.+.+++.++ +++
T Consensus 90 ~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l---~~~ 166 (588)
T PRK13657 90 AVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLV---VLG 166 (588)
T ss_pred HHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 89999999999999988888999999999999999987543 23333333333222222 223333333333 333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 429 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 508 (1459)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 508 (1459)
++...+..++.++..+.+++.++..++..+...|.++|+++||.++.|+.+.+++.+.-++..+...+..........+.
T Consensus 167 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (588)
T PRK13657 167 IVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLN 246 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444566778888888889999999999999999999999999999998877776654443333333222222222211
Q ss_pred H--HHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhc
Q 000503 509 A--TTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 586 (1459)
Q Consensus 509 ~--~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 586 (1459)
. .....+.++++|+|.+.++.+|++.+++++.++..+..|+..+...+..+..+..+++|+.++++.++..+....
T Consensus 247 ~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~-- 324 (588)
T PRK13657 247 RAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPG-- 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCC--
Confidence 1 112234556778888888999999999999999999999999999999999999999999999875432111000
Q ss_pred CCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCe
Q 000503 587 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 666 (1459)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G 666 (1459)
... .......++++|++|+|+.+ . ++|+|+||+++||++++|+|+||||||||+++|+|+++|++|
T Consensus 325 -~~~--------~~~~~~~I~~~~vsf~y~~~--~---~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G 390 (588)
T PRK13657 325 -AID--------LGRVKGAVEFDDVSFSYDNS--R---QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSG 390 (588)
T ss_pred -CCC--------cCCCCCeEEEEEEEEEeCCC--C---ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCC
Confidence 000 01123469999999999632 2 359999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCC-CCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCc
Q 000503 667 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1459)
Q Consensus 667 ~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 732 (1459)
+|.++| .|+||||+|++|++||||||.+++ +.++++..++++.+++++.+..+|+|.+|.+|++|.
T Consensus 391 ~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~ 470 (588)
T PRK13657 391 RILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGR 470 (588)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCC
Confidence 999987 699999999999999999999986 467888999999999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000503 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1459)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~ 812 (1459)
+||||||||++||||++++|+|++||||||+||+++++.+++.+ .. ..+++|+|+||||++.++.||+|++|++|++.
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l-~~-~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~ 548 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAAL-DE-LMKGRTTFIIAHRLSTVRNADRILVFDNGRVV 548 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HH-HhcCCEEEEEEecHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999998873 33 44679999999999999999999999999999
Q ss_pred EecCHHHHHhccccCcc
Q 000503 813 WIGSSADLAVSLYSGFW 829 (1459)
Q Consensus 813 ~~g~~~~l~~~~~~~~~ 829 (1459)
+.|+++++++..+.+.+
T Consensus 549 ~~g~~~~l~~~~~~y~~ 565 (588)
T PRK13657 549 ESGSFDELVARGGRFAA 565 (588)
T ss_pred EeCCHHHHHHCCChHHH
Confidence 99999999866544433
No 58
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.3e-62 Score=621.25 Aligned_cols=522 Identities=20% Similarity=0.237 Sum_probs=413.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000503 288 KVVNDSIGFAGPLLLNKLIKFLQQGS-GHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVR 366 (1459)
Q Consensus 288 ~l~~~~~~~~~P~ll~~li~~~~~~~-~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~ 366 (1459)
.++..++..+.|++++.++|.+.... .....+.+++.++++.++..++.....+...+.+.++...+...+|+|.++++
T Consensus 4 ~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 4 LIIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34556777889999999999875422 22223334444555566667777666777788899999999999999999999
Q ss_pred ccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 367 LAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKF-AFVSGLAITILLIPVNKWIANLIAN 444 (1459)
Q Consensus 367 ~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~p~~i~i~~~lL~~~lg~-a~l~~~~v~~~~~~~~~~~~~~~~~ 444 (1459)
...+.+.++|++++.+++|++.+.... ..+..++..++.+++++++++..++| .+++.++++++...+..++.+++.+
T Consensus 84 ~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 84 PEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888899999999999999998654 34555666555544444333223333 2233333333444455667777778
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 000503 445 ATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP--TLFSLFTFGL 522 (1459)
Q Consensus 445 ~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~~f~~ 522 (1459)
..++..+..++..+.+.|.++|+++||.+++|+.+.+++.+..++..+...+.....+....+..... ..+.++.+|.
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999998888777654444443333333333222221111 2233456778
Q ss_pred HHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCcccCCC
Q 000503 523 FALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSK 602 (1459)
Q Consensus 523 ~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (1459)
|.+.++.+|+|.+++++.+...+..|+..+++.+..+.+++++.+||.++++.++..+... .+. +..
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~----~~~---------~~~ 310 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS----EPV---------PEG 310 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC----CCC---------CCC
Confidence 8888899999999999999999999999999999999999999999999997643211000 000 112
Q ss_pred CceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000503 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1459)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1459)
...++++|++|+|+..+ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 311 ~~~I~~~~v~~~y~~~~----~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~ 386 (569)
T PRK10789 311 RGELDVNIRQFTYPQTD----HPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDS 386 (569)
T ss_pred CCcEEEEEEEEECCCCC----CccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHH
Confidence 34689999999997431 2459999999999999999999999999999999999999999999976
Q ss_pred ---cEEEEcCCCCCCCCCHHHHhccCC-CCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHH
Q 000503 673 ---SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 748 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARal 748 (1459)
.++||+|+|++|++|++|||.++. +.+++++.++++.+++++++..+|+|++|.+|++|.+||||||||++||||+
T Consensus 387 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARal 466 (569)
T PRK10789 387 WRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARAL 466 (569)
T ss_pred HHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHH
Confidence 489999999999999999999985 4788899999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhccccCc
Q 000503 749 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGF 828 (1459)
Q Consensus 749 y~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 828 (1459)
+++|+++|||||||+||+++++++.+. +.. ..+++|+|++||+++.++.||+|++|++|++++.|+++++.++.+.+.
T Consensus 467 l~~~~illlDEpts~LD~~~~~~i~~~-l~~-~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~ 544 (569)
T PRK10789 467 LLNAEILILDDALSAVDGRTEHQILHN-LRQ-WGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYR 544 (569)
T ss_pred hcCCCEEEEECccccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHH
Confidence 999999999999999999999999887 433 456899999999999999999999999999999999999987655443
No 59
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.2e-62 Score=621.30 Aligned_cols=511 Identities=16% Similarity=0.153 Sum_probs=383.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000503 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1459)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1459)
++.++...+....++.++.+.+.... ... ..+..++++.++..++.++..+.....+.+...++|.++++++++.
T Consensus 25 ~~~~~~~~~~~~~~~~i~~~i~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~ 99 (555)
T TIGR01194 25 ALGLAGGLAIIALLASINNAIHEENF--LGQ---GSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGA 99 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCc--ccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33444445555566666666543110 000 1122233445555667777788888899999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1459)
Q Consensus 986 p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~ 1065 (1459)
|+.+|++.++|++++|+++|++.+++.+.. +..++..++.+++.++++++.+|.+.++++..+.+...+..+..+..++
T Consensus 100 ~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~ 178 (555)
T TIGR01194 100 PIEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFK 178 (555)
T ss_pred CHHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987753 5566666666667777777777776655443333333333322222233
Q ss_pred HHHHHHhhhchhHhHHHhhhccHHHHHhcCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSED--YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATM 1143 (1459)
Q Consensus 1066 l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 1143 (1459)
..+......+.+.+.+.|.+.|+++||+|+.++ ...+++.+..++..+................+++..+...+ .
T Consensus 179 ~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 255 (555)
T TIGR01194 179 FFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGC---A 255 (555)
T ss_pred HHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 333334455678899999999999999999954 55667777666666555433222222111112221111111 1
Q ss_pred HHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc-cc---cC-CCC--CCC
Q 000503 1144 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE-LC---GY-QSL--SPD 1216 (1459)
Q Consensus 1144 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~-~~---~~-~~~--~~~ 1216 (1459)
.+++. . .+..+.|.+...+.++..+..++..+...+.+++....+.+|+.++.+.+.++ .. .. ... .+.
T Consensus 256 ~~~~~--~--~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~ 331 (555)
T TIGR01194 256 LFAAA--M--FASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAH 331 (555)
T ss_pred HHHHH--H--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccc
Confidence 11111 0 12346788888888888999999999999999999999999999997642221 10 00 000 011
Q ss_pred CCCCccEEEEEEEEEecCC---CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh
Q 000503 1217 WPFQGLIEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV 1293 (1459)
Q Consensus 1217 wp~~g~I~f~nVs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~ 1293 (1459)
....+.|+|+||+|+|++. .+++|+|+||+|++||++|||||||||||||+++|.|+++|++|+|.+||+|+++++.
T Consensus 332 ~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~ 411 (555)
T TIGR01194 332 DKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSR 411 (555)
T ss_pred CCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH
Confidence 1234689999999999753 2369999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
+++|+++++|||||++|++|+|+|+.+ ..++++++++++.++++++++.+ |+||. .+||||||||++||||
T Consensus 412 ~~~~~~i~~v~q~~~lf~~ti~~n~~~--~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRa 484 (555)
T TIGR01194 412 DDYRDLFSAIFADFHLFDDLIGPDEGE--HASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICA 484 (555)
T ss_pred HHHHhhCcEEccChhhhhhhhhccccc--chhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHH
Confidence 999999999999999999999999743 45788999999999999999988 99984 5899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHH-h-cCCcEEEEeccChhhHhhcCEEEEEeCCeEEEe
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISS-E-CKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1436 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~-~-~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~ 1436 (1459)
++++|+|||||||||+||++|++.+++.+.+ . .+++|+|+||||++++..||+|+||++|+++|.
T Consensus 485 ll~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 485 WLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999887643 3 468999999999999999999999999999975
No 60
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=8.9e-65 Score=637.62 Aligned_cols=436 Identities=22% Similarity=0.360 Sum_probs=335.4
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc--cCCCeEEEEc-------------
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM--MLTHGSIHAS------------- 671 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~--~~~~G~i~~~------------- 671 (1459)
+++|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|.. +|++|+|.++
T Consensus 2 ~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~ 75 (520)
T TIGR03269 2 EVKNLTKKFDG------KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERP 75 (520)
T ss_pred EEEEEEEEECC------eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccc
Confidence 57888888742 23599999999999999999999999999999999996 7999999875
Q ss_pred ----------C-----------------------cEEEEcCC-CCCCC-CCHHHHhccCC---CCCH----HHHHHHHHH
Q 000503 672 ----------G-----------------------SIAYVPQV-PWILS-GTIRDNILFGK---NYDP----QSYSETLKA 709 (1459)
Q Consensus 672 ----------~-----------------------~i~y~~Q~-~~l~~-~ti~~nI~~g~---~~~~----~~~~~v~~~ 709 (1459)
| .++|++|+ +.+++ .|++||+.++. .++. ++..++++.
T Consensus 76 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 155 (520)
T TIGR03269 76 SKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEM 155 (520)
T ss_pred cccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 1 28999997 56665 59999998742 1222 344556666
Q ss_pred hcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEE
Q 000503 710 CTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRI 788 (1459)
Q Consensus 710 ~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i 788 (1459)
++++... .....+|||||||||+||||+..+|+++||||||++||+.+.+++.+. +..... .++|+|
T Consensus 156 ~gl~~~~-----------~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvi 223 (520)
T TIGR03269 156 VQLSHRI-----------THIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA-LEEAVKASGISMV 223 (520)
T ss_pred cCChhhh-----------hcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH-HHHHHHhcCcEEE
Confidence 6664332 234568999999999999999999999999999999999999998775 332112 378999
Q ss_pred EEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCC
Q 000503 789 LCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVS 867 (1459)
Q Consensus 789 ~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 867 (1459)
+|||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 224 ivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-------------------------------------------- 259 (520)
T TIGR03269 224 LTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV-------------------------------------------- 259 (520)
T ss_pred EEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH--------------------------------------------
Confidence 99999999875 999999999998765543321000
Q ss_pred cchhhhhHHHHHhcccchHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHH
Q 000503 868 DDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCI 947 (1459)
Q Consensus 868 ~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~ 947 (1459)
|. .
T Consensus 260 ------------------------~~---------------------------------~-------------------- 262 (520)
T TIGR03269 260 ------------------------FM---------------------------------E-------------------- 262 (520)
T ss_pred ------------------------HH---------------------------------h--------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhH
Q 000503 948 FCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGL 1027 (1459)
Q Consensus 948 l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~ 1027 (1459)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHH
Q 000503 1028 LGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEH 1107 (1459)
Q Consensus 1028 l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~ 1107 (1459)
...
T Consensus 263 -------------------------------------~~~---------------------------------------- 265 (520)
T TIGR03269 263 -------------------------------------GVS---------------------------------------- 265 (520)
T ss_pred -------------------------------------hch----------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1108 VVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETE 1187 (1459)
Q Consensus 1108 ~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e 1187 (1459)
. .+
T Consensus 266 -------------------------------------------~----------------------------------~~ 268 (520)
T TIGR03269 266 -------------------------------------------E----------------------------------VE 268 (520)
T ss_pred -------------------------------------------h----------------------------------hc
Confidence 0 00
Q ss_pred HHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecC---CCCccceeeeEEEeCCcEEEEECCCCCcHH
Q 000503 1188 KEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKP---SLPAALHDINFTIEGGTQVGIVGRTGAGKS 1264 (1459)
Q Consensus 1188 ~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~---~~~~vL~~isl~I~~GekvgIvGrtGSGKS 1264 (1459)
. .++. +. ....++++|++++|+. +..++|+|+||+|++||++||+|+||||||
T Consensus 269 ~-------------~~~~-------~~----~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKS 324 (520)
T TIGR03269 269 K-------------ECEV-------EV----GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKT 324 (520)
T ss_pred c-------------cccc-------CC----CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHH
Confidence 0 0000 00 0124999999999953 234699999999999999999999999999
Q ss_pred HHHHHHhccCCCCCceEEEC-CE---eCCCCC---hHHHhcccEEEeCCCcCCCc-cHHHhcCcC-C-CCChHHHHHHHH
Q 000503 1265 SILNALFRLTPICGGQILVD-GL---NIINTP---VRDLRGRFAVVPQSPFLFEG-SLRDNLDPF-H-MNDDLKIWSVLE 1334 (1459)
Q Consensus 1265 TLl~~L~rl~~~~~G~I~ID-G~---di~~i~---~~~lR~~i~~VpQdp~lf~g-TIReNLdp~-~-~~~d~ei~~aL~ 1334 (1459)
||+++|.|+++|++|+|.++ |. ++...+ ...+|++++|+||++.+|+. |+++|+... . ....++ .
T Consensus 325 TLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~-----~ 399 (520)
T TIGR03269 325 TLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDEL-----A 399 (520)
T ss_pred HHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHH-----H
Confidence 99999999999999999996 64 344332 23567789999999988875 999999632 1 111111 1
Q ss_pred HhcHHHHHHhCCCch-----hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCc
Q 000503 1335 KCHVKEEVEAVGLET-----FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGM 1407 (1459)
Q Consensus 1335 ~~~l~~~i~~lGLdt-----~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~ 1407 (1459)
+....+.++.+|++. ........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .+.
T Consensus 400 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~ 479 (520)
T TIGR03269 400 RMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQ 479 (520)
T ss_pred HHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCc
Confidence 112234445556643 3455566899999999999999999999999999999999999999999998764 278
Q ss_pred EEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1408 TVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1408 TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 480 tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 480 TFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred EEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999876 89999999999999999998864
No 61
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-64 Score=633.74 Aligned_cols=446 Identities=21% Similarity=0.329 Sum_probs=337.4
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|.. .++|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 78 (510)
T PRK09700 5 YISMAGIGKSFGP------VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAA 78 (510)
T ss_pred eEEEeeeEEEcCC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHH
Confidence 4789999998852 2359999999999999999999999999999999999999999999875
Q ss_pred --cEEEEcCCCCCCCC-CHHHHhccCCC-----C-----CH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccC
Q 000503 673 --SIAYVPQVPWILSG-TIRDNILFGKN-----Y-----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1459)
Q Consensus 673 --~i~y~~Q~~~l~~~-ti~~nI~~g~~-----~-----~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 735 (1459)
.++|++|++.++.. |++||+.++.. + +. ++..++++.+++... ......+||
T Consensus 79 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS 147 (510)
T PRK09700 79 QLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVD-----------LDEKVANLS 147 (510)
T ss_pred HCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCC-----------cccchhhCC
Confidence 38999999987765 99999987531 0 11 123334444444321 234556899
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000503 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1459)
Q Consensus 736 GGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1459)
|||||||+||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 148 gG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~ 226 (510)
T PRK09700 148 ISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLI-MNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCS 226 (510)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeee
Confidence 9999999999999999999999999999999999988876 33212347899999999999875 999999999999877
Q ss_pred cCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHHHHh
Q 000503 815 GSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAK 894 (1459)
Q Consensus 815 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~ 894 (1459)
|+++++... +.. ....+
T Consensus 227 g~~~~~~~~------------------------------------------------~~~---~~~~~------------ 243 (510)
T PRK09700 227 GMVSDVSND------------------------------------------------DIV---RLMVG------------ 243 (510)
T ss_pred cchhhCCHH------------------------------------------------HHH---HHhcC------------
Confidence 764432100 000 00000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 895 FSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKV 974 (1459)
Q Consensus 895 ~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 974 (1459)
.
T Consensus 244 ------------------------------------~------------------------------------------- 244 (510)
T PRK09700 244 ------------------------------------R------------------------------------------- 244 (510)
T ss_pred ------------------------------------C-------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000503 975 HNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSK 1054 (1459)
Q Consensus 975 h~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~ 1054 (1459)
+
T Consensus 245 -----------~-------------------------------------------------------------------- 245 (510)
T PRK09700 245 -----------E-------------------------------------------------------------------- 245 (510)
T ss_pred -----------C--------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1055 LQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAA 1134 (1459)
Q Consensus 1055 ~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~ 1134 (1459)
.. .
T Consensus 246 -----------~~-----~------------------------------------------------------------- 248 (510)
T PRK09700 246 -----------LQ-----N------------------------------------------------------------- 248 (510)
T ss_pred -----------cc-----c-------------------------------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCC
Q 000503 1135 FIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLS 1214 (1459)
Q Consensus 1135 ~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~ 1214 (1459)
.. .. ..+.. .++
T Consensus 249 ----------------~~-~~----------------------------------------------~~~~~-----~~~ 260 (510)
T PRK09700 249 ----------------RF-NA----------------------------------------------MKENV-----SNL 260 (510)
T ss_pred ----------------cc-cc----------------------------------------------ccccc-----ccC
Confidence 00 00 00000 000
Q ss_pred CCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh-
Q 000503 1215 PDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV- 1293 (1459)
Q Consensus 1215 ~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~- 1293 (1459)
+.+..++++|+++.|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.
T Consensus 261 ---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~ 333 (510)
T PRK09700 261 ---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPL 333 (510)
T ss_pred ---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHH
Confidence 0112599999998763 38999999999999999999999999999999999999999999999999876543
Q ss_pred HHHhcccEEEeCCC---cCCCc-cHHHhcCcCCCCChH------HH-HHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChh
Q 000503 1294 RDLRGRFAVVPQSP---FLFEG-SLRDNLDPFHMNDDL------KI-WSVLEKCHVKEEVEAVGLE-TFVKESGISFSVG 1361 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp---~lf~g-TIReNLdp~~~~~d~------ei-~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgG 1361 (1459)
..+|++++|+||++ .+|++ |+++|+......... .. ...-++....+.++.+|+. .........||||
T Consensus 334 ~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG 413 (510)
T PRK09700 334 DAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGG 413 (510)
T ss_pred HHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCccccCChH
Confidence 45678999999984 57765 999998753210000 00 0000112234455556775 3456666789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecCh
Q 000503 1362 QRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1439 (1459)
Q Consensus 1362 QrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1439 (1459)
||||++|||||+++|+||||||||++||..+.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++|++++.+++
T Consensus 414 q~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~ 493 (510)
T PRK09700 414 NQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTN 493 (510)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecC
Confidence 9999999999999999999999999999999999999998753 48899999999998865 899999999999998877
Q ss_pred hH
Q 000503 1440 QT 1441 (1459)
Q Consensus 1440 ~e 1441 (1459)
.+
T Consensus 494 ~~ 495 (510)
T PRK09700 494 RD 495 (510)
T ss_pred cc
Confidence 33
No 62
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3e-63 Score=674.73 Aligned_cols=248 Identities=22% Similarity=0.284 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHHHHhhh--cCCccccccCCCCCCCCCCCc--cEEEEEEEEEec--CCCCccceeeeEEEeCCcEEEEEC
Q 000503 1184 TETEKEMVSLERVLEYM--DVPQEELCGYQSLSPDWPFQG--LIEFQNVTMRYK--PSLPAALHDINFTIEGGTQVGIVG 1257 (1459)
Q Consensus 1184 ~~~e~~~~s~~Ri~~~~--~~~~e~~~~~~~~~~~wp~~g--~I~f~nVs~~Y~--~~~~~vL~~isl~I~~GekvgIvG 1257 (1459)
.+.|..+.++||..++. +.+.|.......... .+.+| .++++||+++|+ ++.+++|+|||++|+|||++||+|
T Consensus 718 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G 796 (1394)
T TIGR00956 718 ETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDM-EKESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMG 796 (1394)
T ss_pred cccccccccccccccCCCCccccccccccccccc-cccCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEEC
Confidence 45566677888888763 233332111111000 01134 478999999995 334579999999999999999999
Q ss_pred CCCCcHHHHHHHHhccCC---CCCceEEECCEeCCCCChHHHhcccEEEeCCCcC-CCccHHHhcCcCC------CCChH
Q 000503 1258 RTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL-FEGSLRDNLDPFH------MNDDL 1327 (1459)
Q Consensus 1258 rtGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~l-f~gTIReNLdp~~------~~~d~ 1327 (1459)
|||||||||+++|.|+.+ |++|+|.+||.++. ..+|++++||||++.+ +..|+||||++.. ..+++
T Consensus 797 ~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~ 872 (1394)
T TIGR00956 797 ASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKS 872 (1394)
T ss_pred CCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHH
Confidence 999999999999999998 78899999999985 2578999999998765 4569999997421 22333
Q ss_pred H----HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC-EEEEeccCcCCCHHHHHHHHHHHHH
Q 000503 1328 K----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK-VLCLDECTANVDAQTASILQNAISS 1402 (1459)
Q Consensus 1328 e----i~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~-ILlLDEaTS~lD~~te~~I~~~I~~ 1402 (1459)
+ +.++++..++.+ -.|+.+++.|.+||||||||++|||||+.+|+ ||+||||||+||..+...+++.|++
T Consensus 873 ~~~~~v~~~l~~l~L~~-----~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~ 947 (1394)
T TIGR00956 873 EKMEYVEEVIKLLEMES-----YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRK 947 (1394)
T ss_pred HHHHHHHHHHHHcCChh-----hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHH
Confidence 3 344455544433 25788888888999999999999999999997 9999999999999999999999988
Q ss_pred h-cCCcEEEEeccChhhH--hhcCEEEEEeCC-eEEEecChhH
Q 000503 1403 E-CKGMTVITIAHRISTV--LNMDEILILDHG-HLVEQGNPQT 1441 (1459)
Q Consensus 1403 ~-~~~~TvI~IaHrl~ti--~~~DrIlVl~~G-~IvE~G~p~e 1441 (1459)
. .+++|||+++|+++.. ..||+|++|++| +++++|++.+
T Consensus 948 la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 948 LADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 7 4689999999999974 568999999997 9999999854
No 63
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=6.4e-63 Score=565.70 Aligned_cols=530 Identities=20% Similarity=0.271 Sum_probs=448.7
Q ss_pred cchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 267 PSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKL 346 (1459)
Q Consensus 267 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 346 (1459)
.....+.+..++..++..+++..+.+++.+..|+++-++.|.+-.+.+.....++.+....+|+++.+++..+.+...|+
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Ri 90 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRI 90 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778888888999999999999999999999999999998877777788888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000503 347 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-----SFHDAWSLPFQIGVALYLLYTQVKFAF 421 (1459)
Q Consensus 347 ~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-----~~~~~~~~p~~i~i~~~lL~~~lg~a~ 421 (1459)
+.++...|...||.-+++.+..........+.+ .|.+.+..+.. .+.+..+.|+.+++ +|+++..+|+.+
T Consensus 91 g~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v-~fl~Hp~lG~~a 165 (580)
T COG4618 91 GERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAV-IFLFHPWLGLIA 165 (580)
T ss_pred HHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHH-HHHHHHHHHHHH
Confidence 999999999999999976655433222222332 36666666543 57788889998887 789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 422 VSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLD 501 (1459)
Q Consensus 422 l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~ 501 (1459)
++|.++++.+..+|-++++ +..++-.+..-+|.......++|..+|+.+|+.+...+++.+.....++...+.....
T Consensus 166 ~~ga~iLv~la~ln~~~t~---~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~ 242 (580)
T COG4618 166 LAGAIILVVLALLNERATR---KPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRN 242 (580)
T ss_pred HHHHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999888888877776665 5567778888899999999999999999999999999999988877776655544433
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 000503 502 AWCVFFWATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYK 579 (1459)
Q Consensus 502 ~~~~~~~~~~~~~--~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~ 579 (1459)
.....+.-..-.+ ..++..|+|++.++++|+|.++++-.+......|+......+.++..|+.|++|++++|......
T Consensus 243 ~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~ 322 (580)
T COG4618 243 GAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAA 322 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 3332222222222 34567888999999999999999999999999999999999999999999999999999643221
Q ss_pred hhhhhhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhc
Q 000503 580 HELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILG 659 (1459)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g 659 (1459)
++.. ..+.++..+.++++++.-|.. .+++++|+||++++|+-++||||||||||||.++|.|
T Consensus 323 ~~~m--------------~LP~P~g~L~Ve~l~~~PPg~----~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG 384 (580)
T COG4618 323 AERM--------------PLPAPQGALSVERLTAAPPGQ----KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVG 384 (580)
T ss_pred cCCC--------------CCCCCCceeeEeeeeecCCCC----CCcceecceeEecCCceEEEECCCCccHHHHHHHHHc
Confidence 1110 112355678899999865432 2456999999999999999999999999999999999
Q ss_pred CccCCCeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhc-cCCCCCHHHHHHHHHHhcchhhHhhccCCCcc
Q 000503 660 EMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNIL-FGKNYDPQSYSETLKACTLDVDISLMVGGDMA 725 (1459)
Q Consensus 660 ~~~~~~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~-~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t 725 (1459)
..+|.+|+|++|| +|||.||+..||.|||+|||. |+.+.|+++.-++.++.+.++-|..+|+||+|
T Consensus 385 ~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT 464 (580)
T COG4618 385 IWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDT 464 (580)
T ss_pred ccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccC
Confidence 9999999999987 699999999999999999995 88889999999999999999999999999999
Q ss_pred cccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEE
Q 000503 726 YIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVV 805 (1459)
Q Consensus 726 ~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~ 805 (1459)
.||+.|.+|||||||||+||||+|.+|.+++||||.|+||.+-+..+.+. +.....+|.|+|+||||++.+..+|+|++
T Consensus 465 ~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~A-i~~~k~rG~~vvviaHRPs~L~~~Dkilv 543 (580)
T COG4618 465 RIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAA-ILAAKARGGTVVVIAHRPSALASVDKILV 543 (580)
T ss_pred ccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHH-HHHHHHcCCEEEEEecCHHHHhhcceeee
Confidence 99999999999999999999999999999999999999999988877765 55546788999999999999999999999
Q ss_pred EeCCeEEEecCHHHHHhc
Q 000503 806 MDKGQVKWIGSSADLAVS 823 (1459)
Q Consensus 806 l~~G~i~~~g~~~~l~~~ 823 (1459)
|++|++...|+.+|+.++
T Consensus 544 l~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 544 LQDGRIAAFGPREEVLAK 561 (580)
T ss_pred ecCChHHhcCCHHHHHHH
Confidence 999999999999998765
No 64
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.5e-64 Score=632.26 Aligned_cols=436 Identities=21% Similarity=0.315 Sum_probs=335.7
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|.. .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~i~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~ 77 (501)
T PRK10762 4 LLQLKGIDKAFPG------VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQ 77 (501)
T ss_pred eEEEeeeEEEeCC------eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHH
Confidence 4788999998852 2359999999999999999999999999999999999999999999875
Q ss_pred --cEEEEcCCCCCCCC-CHHHHhccCCC-------CCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHH
Q 000503 673 --SIAYVPQVPWILSG-TIRDNILFGKN-------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1459)
Q Consensus 673 --~i~y~~Q~~~l~~~-ti~~nI~~g~~-------~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 738 (1459)
.++|++|++.++.. |++||+.++.. ++.+ +..++++.+++... ......+|||||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~ 146 (501)
T PRK10762 78 EAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFS-----------SDKLVGELSIGE 146 (501)
T ss_pred hCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCC-----------ccCchhhCCHHH
Confidence 38999999987754 99999998642 1222 23344444444321 234456899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCH
Q 000503 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 817 (1459)
Q Consensus 739 kqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~ 817 (1459)
||||+||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|+++..|+.
T Consensus 147 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~ 225 (501)
T PRK10762 147 QQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRV-IRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREV 225 (501)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCc
Confidence 9999999999999999999999999999999988765 32212347899999999999865 999999999999876543
Q ss_pred HHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHHHHhhhh
Q 000503 818 ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG 897 (1459)
Q Consensus 818 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 897 (1459)
+++.. ++ .
T Consensus 226 ~~~~~-----------------------------------------------------~~--------~----------- 233 (501)
T PRK10762 226 ADLTE-----------------------------------------------------DS--------L----------- 233 (501)
T ss_pred CcCCH-----------------------------------------------------HH--------H-----------
Confidence 22100 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 898 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 977 (1459)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 977 (1459)
...+...
T Consensus 234 ------------------------~~~~~~~------------------------------------------------- 240 (501)
T PRK10762 234 ------------------------IEMMVGR------------------------------------------------- 240 (501)
T ss_pred ------------------------HHHhcCC-------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 978 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1057 (1459)
Q Consensus 978 ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~ 1057 (1459)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1058 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1137 (1459)
Q Consensus 1058 ~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 1137 (1459)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCC
Q 000503 1138 SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW 1217 (1459)
Q Consensus 1138 ~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~w 1217 (1459)
.. . ..++.. ..+
T Consensus 241 -------------~~-~----------------------------------------------~~~~~~-----~~~--- 252 (501)
T PRK10762 241 -------------KL-E----------------------------------------------DQYPRL-----DKA--- 252 (501)
T ss_pred -------------Cc-c----------------------------------------------cccccc-----ccC---
Confidence 00 0 000000 000
Q ss_pred CCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh-HHH
Q 000503 1218 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDL 1296 (1459)
Q Consensus 1218 p~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~l 1296 (1459)
|..-.|+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+
T Consensus 253 ~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~ 325 (501)
T PRK10762 253 PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGL 325 (501)
T ss_pred CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHH
Confidence 0112488999974 37999999999999999999999999999999999999999999999999987664 356
Q ss_pred hcccEEEeCCC---cCCC-ccHHHhcCcCCC---------CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhH
Q 000503 1297 RGRFAVVPQSP---FLFE-GSLRDNLDPFHM---------NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQ 1362 (1459)
Q Consensus 1297 R~~i~~VpQdp---~lf~-gTIReNLdp~~~---------~~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQ 1362 (1459)
|++++||||+| .+|. -|+++|+..... .+..+ .+....+.++.+|++ ...+.....|||||
T Consensus 326 ~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSgGe 400 (501)
T PRK10762 326 ANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHAD-----EQQAVSDFIRLFNIKTPSMEQAIGLLSGGN 400 (501)
T ss_pred HCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHH-----HHHHHHHHHHhcCCCCCCccCchhhCCHHH
Confidence 78899999997 3554 599999964211 01111 111234455556774 34566677899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChh
Q 000503 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1440 (1459)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~ 1440 (1459)
|||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++
T Consensus 401 kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~ 480 (501)
T PRK10762 401 QQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEFTRE 480 (501)
T ss_pred HHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccc
Confidence 999999999999999999999999999999999999998864 47899999999999876 8999999999999999988
Q ss_pred HHh
Q 000503 1441 TLL 1443 (1459)
Q Consensus 1441 eLl 1443 (1459)
++.
T Consensus 481 ~~~ 483 (501)
T PRK10762 481 QAT 483 (501)
T ss_pred cCC
Confidence 764
No 65
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=8e-62 Score=617.64 Aligned_cols=528 Identities=23% Similarity=0.288 Sum_probs=418.9
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 277 YGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMT 356 (1459)
Q Consensus 277 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~ 356 (1459)
++ .++...++.++..++....|.++..+++.+.. .......+...+++++++..++.....+...+.+.++...+..
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~ 89 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA--DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRR 89 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 77778888888999999999999999988762 1222233334444444556666666667777777999999999
Q ss_pred HHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHH
Q 000503 357 IIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWS-LPFQIGVALYLLY---TQVKFAFVSGLAITILLI 432 (1459)
Q Consensus 357 ~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~-~p~~i~i~~~lL~---~~lg~a~l~~~~v~~~~~ 432 (1459)
.+|+|.++++...+++...|++++.++.|++.+............ +++.++..+.+++ +.+++..+.+ .+++.
T Consensus 90 ~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~ 166 (567)
T COG1132 90 DLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLI---LPLLA 166 (567)
T ss_pred HHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHH
Confidence 999999999999988888999999999999999987766433222 3333333222222 2333333322 23333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Q 000503 433 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFF--WAT 510 (1459)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~--~~~ 510 (1459)
....++.++.++..++..+..++..+.+.|.++|++.||.++.|+...++..+..++..+...+........... ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (567)
T COG1132 167 LVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLS 246 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666688888888899999999999999999999999999877666655444444433323222222211 112
Q ss_pred HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCC
Q 000503 511 TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 590 (1459)
Q Consensus 511 ~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~ 590 (1459)
.-....++.++.+.+..+.+++|.+.+++.++..+..|+..+...+..+..+..+.+|+.++++.++...+... +
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~----~- 321 (567)
T COG1132 247 SLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPD----P- 321 (567)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC----C-
Confidence 22234455667777788889999999999999999999999999999999999999999999987442111000 0
Q ss_pred cccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEE
Q 000503 591 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 670 (1459)
Q Consensus 591 ~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~ 670 (1459)
.......|+++|++|+|+++ +++|+|+||++++||.++||||+||||||++++|+|+++|++|+|.+
T Consensus 322 --------~~~~~~~I~f~~vsf~y~~~-----~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~i 388 (567)
T COG1132 322 --------LKDTIGSIEFENVSFSYPGK-----KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILI 388 (567)
T ss_pred --------CCCCCCeEEEEEEEEEcCCC-----CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEE
Confidence 01234569999999999742 34599999999999999999999999999999999999999999999
Q ss_pred cC-------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 671 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 671 ~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
+| +||||||+|+||++||+|||.+|++ .++++..++++.+++++.++.+|+|++|.+||+|.+|||
T Consensus 389 dg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSg 468 (567)
T COG1132 389 DGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSG 468 (567)
T ss_pred CCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCH
Confidence 87 5999999999999999999999987 588899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecC
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~ 816 (1459)
|||||++||||++++|+|++||||||+||+++++.|.+.+ .. +.++||+|+|+||++.+..||+|++|++|+|++.|+
T Consensus 469 GQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l-~~-l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~ 546 (567)
T COG1132 469 GQRQRLAIARALLRNPPILILDEATSALDTETEALIQDAL-KK-LLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGT 546 (567)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHH-HH-HhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecC
Confidence 9999999999999999999999999999999999998874 32 457789999999999999999999999999999999
Q ss_pred HHHHHhccccCccc
Q 000503 817 SADLAVSLYSGFWS 830 (1459)
Q Consensus 817 ~~~l~~~~~~~~~~ 830 (1459)
|+|++++++.+.++
T Consensus 547 h~eLl~~~g~y~~l 560 (567)
T COG1132 547 HEELLAKGGLYARL 560 (567)
T ss_pred HHHHHHcCCHHHHH
Confidence 99999876655443
No 66
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.4e-62 Score=671.55 Aligned_cols=548 Identities=19% Similarity=0.204 Sum_probs=395.0
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 886 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 965 (1459)
Q Consensus 886 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 965 (1459)
.+..+..++..++..+... +..++...+...+++.++...+.............|+.++++..++..++.....+....
T Consensus 289 ~~l~~~l~~~~~~~~~~~~-~~~i~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (1495)
T PLN03232 289 PWLLRALNNSLGGRFWLGG-IFKIGHDLSQFVGPVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGR 367 (1495)
T ss_pred chHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566665555544333 344566666666777776665533211111111112222222222222222222223356
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHH
Q 000503 966 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1045 (1459)
Q Consensus 966 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1045 (1459)
.+.+....+...+++++++.|..++++.++|+++||+++|++.+++... .+..+....+.+++.++++.....+..++.
T Consensus 368 ~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~~-~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~ 446 (1495)
T PLN03232 368 VGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIAE-QLHGLWSAPFRIIVSMVLLYQQLGVASLFG 446 (1495)
T ss_pred HHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 6777778888899999999999999999999999999999999988753 333333333333333332222111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1046 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1125 (1459)
Q Consensus 1046 ~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl 1125 (1459)
+++.+++..+..++.+..++.++.....+....+.+.|.++|+++||+|+||+.+.+++.+..+...+..........+.
T Consensus 447 ~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~ 526 (1495)
T PLN03232 447 SLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFN 526 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222223333333444444445555667789999999999999999999999999887766555544433333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 000503 1126 SLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQE 1205 (1459)
Q Consensus 1126 ~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e 1205 (1459)
........ .++.++.+.+.... .+..++|.+..++++...+..++..+...+..+..+..|.+|+.++++.+++
T Consensus 527 ~~~~~~~~-~~~~~~~fg~~~v~-----~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~ 600 (1495)
T PLN03232 527 SFILNSIP-VVVTLVSFGVFVLL-----GGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEER 600 (1495)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 22111111 11111111111111 2345788888888999999999999999999999999999999999986654
Q ss_pred ccccCCCCCCCCCCCccEEEEEEEEEecCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEEC
Q 000503 1206 ELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD 1284 (1459)
Q Consensus 1206 ~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~ID 1284 (1459)
.... .+ +..+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+.
T Consensus 601 ~~~~--~~-~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~-- 675 (1495)
T PLN03232 601 ILAQ--NP-PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV-- 675 (1495)
T ss_pred cccc--cC-CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE--
Confidence 2111 11 111234579999999999753 35799999999999999999999999999999999999999999773
Q ss_pred CEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhH
Q 000503 1285 GLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1362 (1459)
Q Consensus 1285 G~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQ 1362 (1459)
.+|++++||||+|++|+|||||||.++.++++++++++++.|++.+.++.+ |+||.|||+|.+|||||
T Consensus 676 ----------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQ 745 (1495)
T PLN03232 676 ----------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQ 745 (1495)
T ss_pred ----------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHH
Confidence 368899999999999999999999999888999999999999999999988 99999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHH-HHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhH
Q 000503 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASIL-QNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQT 1441 (1459)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I-~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~e 1441 (1459)
||||+||||++++|+|+|||||||+||++|++.| ++.++...+++|+|+||||++++..||+|++|++|+|+|.|+|+|
T Consensus 746 kQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~e 825 (1495)
T PLN03232 746 KQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAE 825 (1495)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHH
Confidence 9999999999999999999999999999999866 556777778999999999999999999999999999999999999
Q ss_pred HhccCCcHHHHHHHhh
Q 000503 1442 LLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1442 Ll~~~~~~f~~l~~~~ 1457 (1459)
|+++ ++.|+++++..
T Consensus 826 L~~~-~~~~~~l~~~~ 840 (1495)
T PLN03232 826 LSKS-GSLFKKLMENA 840 (1495)
T ss_pred HHhc-chhHHHHHHhc
Confidence 9975 46899988654
No 67
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.1e-62 Score=666.75 Aligned_cols=545 Identities=18% Similarity=0.197 Sum_probs=390.4
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 888 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 967 (1459)
Q Consensus 888 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 967 (1459)
..+..++..++..+.. +++.++..++...+++.++...+.............++.++++..++..++..-..+.....+
T Consensus 291 l~~~l~~~~~~~~~~~-~~~~i~~~~~~~~~P~ll~~li~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 369 (1622)
T PLN03130 291 LLRALNNSLGGRFWLG-GFFKIGNDLSQFVGPLLLNLLLESMQNGEPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVG 369 (1622)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555443332 234455556666667766665543211111111111111111111111211111112234566
Q ss_pred HHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHH
Q 000503 968 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1047 (1459)
Q Consensus 968 ~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p 1047 (1459)
.+....+...+++++++.|..++++.++|+++|++++|++.+++.... +..+....+.+++.++++.....+..++.++
T Consensus 370 ~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~~-l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~ 448 (1622)
T PLN03130 370 FRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQQ-LHTLWSAPFRIIIAMVLLYQQLGVASLIGSL 448 (1622)
T ss_pred HHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777888999999999999999999999999999999999987643 3333333333333333333222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1048 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1127 (1459)
Q Consensus 1048 l~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 1127 (1459)
++++...++.++.+..+..++.....+....+.+.|.++|+++||+|+||+.|.+++.+..+...+..........+...
T Consensus 449 v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~ 528 (1622)
T PLN03130 449 MLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSF 528 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233333333434444444444556667778999999999999999999999999987666544433322222222221
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Q 000503 1128 RLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEEL 1207 (1459)
Q Consensus 1128 ~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~ 1207 (1459)
...... .++.++.+...... .+..++|.+..++++...+..++..+...+..+..+..|.+|+.++++.+++..
T Consensus 529 ~~~~~~-~~v~~~~fg~~~~~-----~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~ 602 (1622)
T PLN03130 529 ILNSIP-VLVTVVSFGVFTLL-----GGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVL 602 (1622)
T ss_pred HHHHHH-HHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 111111 11111111111111 234578888888888888888999999999999999999999999997654321
Q ss_pred ccCCCCCCCCCCCccEEEEEEEEEecCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCC-ceEEECC
Q 000503 1208 CGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG-GQILVDG 1285 (1459)
Q Consensus 1208 ~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~-G~I~IDG 1285 (1459)
... ++ .-+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++ |+|.+
T Consensus 603 ~~~--~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l-- 677 (1622)
T PLN03130 603 LPN--PP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI-- 677 (1622)
T ss_pred ccC--Cc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE--
Confidence 111 11 11224579999999999753 3579999999999999999999999999999999999999999 99974
Q ss_pred EeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHH
Q 000503 1286 LNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQR 1363 (1459)
Q Consensus 1286 ~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQr 1363 (1459)
|++|+||||+|++|+|||||||.++.++++++++++++.|+|.+.++.+ |++|.|||+|.+||||||
T Consensus 678 -----------~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQK 746 (1622)
T PLN03130 678 -----------RGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQK 746 (1622)
T ss_pred -----------cCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHH
Confidence 7799999999999999999999999889999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHH-HHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHH
Q 000503 1364 QLICLARALLKSSKVLCLDECTANVDAQTASIL-QNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTL 1442 (1459)
Q Consensus 1364 Qrl~LARALLr~~~ILlLDEaTS~lD~~te~~I-~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eL 1442 (1459)
|||+||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|++|+|+|.|+|+||
T Consensus 747 QRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL 826 (1622)
T PLN03130 747 QRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEEL 826 (1622)
T ss_pred HHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999866 6678777789999999999999999999999999999999999999
Q ss_pred hccCCcHHHHHHHhh
Q 000503 1443 LQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1443 l~~~~~~f~~l~~~~ 1457 (1459)
+++ ++.|+++++..
T Consensus 827 ~~~-~~~~~~l~~~~ 840 (1622)
T PLN03130 827 SNN-GPLFQKLMENA 840 (1622)
T ss_pred Hhc-chhHHHHHHhc
Confidence 975 46899988654
No 68
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=2e-61 Score=609.81 Aligned_cols=507 Identities=21% Similarity=0.213 Sum_probs=401.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 278 GYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMT 356 (1459)
Q Consensus 278 ~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~ 356 (1459)
++.++..+++.++..++..+.|++++.++|.+. ++......+.+++.++++.++..++.....+...+++.++...+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677788889999999999999999999874 3222223334455555666777788888888889999999999999
Q ss_pred HHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHH
Q 000503 357 IIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLL---YTQVKFAFVSGLAITILLI 432 (1459)
Q Consensus 357 ~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL---~~~lg~a~l~~~~v~~~~~ 432 (1459)
.+|+|.++++.....+.++|++++.++.|++.+.+... .+..+....+.+++++.++ .+.+++..++++ ++..
T Consensus 82 ~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~---~l~~ 158 (529)
T TIGR02857 82 RLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTA---PLIP 158 (529)
T ss_pred HHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH---HHHH
Confidence 99999999999988889999999999999999987554 3555555444443333322 233333333222 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 433 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP 512 (1459)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~ 512 (1459)
.+..++.++..+..++.++..+++.+.+.|.++|+++||.|++|+.+.+++++.-++..+...+..........+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02857 159 IFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFA 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23355677777888888899999999999999999999999999999888876654444443333333333222222222
Q ss_pred HHH--HHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCC
Q 000503 513 TLF--SLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 590 (1459)
Q Consensus 513 ~~~--~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~ 590 (1459)
.+. .++.++.+.+.++.+|.+.+++++.+...+..|+..+...+..+.++..+++|+.++++.++...... ..+
T Consensus 239 ~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~- 314 (529)
T TIGR02857 239 TLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVT- 314 (529)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCC-
Confidence 121 12234445555778999999999999999999999999999999999999999999997442111000 000
Q ss_pred cccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEE
Q 000503 591 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 670 (1459)
Q Consensus 591 ~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~ 670 (1459)
......++++|++|+|+..+ +++|+|+||++++|+.++|+||+|||||||+++|+|+++|++|+|.+
T Consensus 315 ---------~~~~~~i~~~~v~f~y~~~~----~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~ 381 (529)
T TIGR02857 315 ---------AAPAPSLEFSGLSVAYPGRR----APALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAV 381 (529)
T ss_pred ---------CCCCCeEEEEEEEEECCCCC----cccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 01124699999999997431 24599999999999999999999999999999999999999999999
Q ss_pred cC-------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 671 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 671 ~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
+| .++||+|+|++|++||||||.++.+ .++++..++++.++++++++.+|+|++|.+||+|.+|||
T Consensus 382 ~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSg 461 (529)
T TIGR02857 382 NGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSG 461 (529)
T ss_pred CCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCH
Confidence 87 4999999999999999999999864 678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEE
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVM 806 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l 806 (1459)
|||||++||||++++|++++||||||+||+++++.+.+. +.. ..+++|+|+||||++.++.||+|++|
T Consensus 462 Gq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~-l~~-~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 462 GQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEA-LRA-LAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999999999999887 444 45789999999999999999999975
No 69
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=6.9e-64 Score=626.43 Aligned_cols=451 Identities=21% Similarity=0.352 Sum_probs=344.1
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|+++.|.. +.+|+|+||++++|++++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 10 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 83 (510)
T PRK15439 10 PLLCARSISKQYSG------VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKA 83 (510)
T ss_pred ceEEEEeEEEEeCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHH
Confidence 35889999999852 2359999999999999999999999999999999999999999999876
Q ss_pred ---cEEEEcCCCCCCCC-CHHHHhccCCCCC---HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 673 ---SIAYVPQVPWILSG-TIRDNILFGKNYD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~~-ti~~nI~~g~~~~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
.++|++|++.++.. |++||+.++.... +++..++++..++... ......+|||||||||+||
T Consensus 84 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la 152 (510)
T PRK15439 84 HQLGIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLD-----------LDSSAGSLEVADRQIVEIL 152 (510)
T ss_pred HhCCEEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcc-----------ccCChhhCCHHHHHHHHHH
Confidence 38999999987765 9999999875322 2344555666655422 2334568999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHhcc
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVSL 824 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 824 (1459)
|||+.+|+++||||||++||+...+++.+. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 153 ~aL~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (510)
T PRK15439 153 RGLMRDSRILILDEPTASLTPAETERLFSR-IRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD 231 (510)
T ss_pred HHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH
Confidence 999999999999999999999999988876 33222347899999999998865 9999999999999887765531100
Q ss_pred ccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHHHHhhhhHHHHHHH
Q 000503 825 YSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITLVI 904 (1459)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~ 904 (1459)
. ... +.
T Consensus 232 ------------------------------------------------~---~~~------------~~----------- 237 (510)
T PRK15439 232 ------------------------------------------------I---IQA------------IT----------- 237 (510)
T ss_pred ------------------------------------------------H---HHH------------Hh-----------
Confidence 0 000 00
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000503 905 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 984 (1459)
Q Consensus 905 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 984 (1459)
.. . ..
T Consensus 238 ----------------------~~--~--~~------------------------------------------------- 242 (510)
T PRK15439 238 ----------------------PA--A--RE------------------------------------------------- 242 (510)
T ss_pred ----------------------Cc--c--cc-------------------------------------------------
Confidence 00 0 00
Q ss_pred CccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 985 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1064 (1459)
Q Consensus 985 ~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr 1064 (1459)
.
T Consensus 243 -------------------------------------------------------------------------------~ 243 (510)
T PRK15439 243 -------------------------------------------------------------------------------K 243 (510)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred HHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1065 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1144 (1459)
Q Consensus 1065 ~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1144 (1459)
+.+..
T Consensus 244 ~~~~~--------------------------------------------------------------------------- 248 (510)
T PRK15439 244 SLSAS--------------------------------------------------------------------------- 248 (510)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 00000
Q ss_pred HHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEE
Q 000503 1145 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIE 1224 (1459)
Q Consensus 1145 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~ 1224 (1459)
. +. .+ ..+.... ..+ +.+-.|+
T Consensus 249 ------~-------------------------------------------~~-~~-~~~~~~~----~~~---~~~~~l~ 270 (510)
T PRK15439 249 ------Q-------------------------------------------KL-WL-ELPGNRR----QQA---AGAPVLT 270 (510)
T ss_pred ------c-------------------------------------------cc-cc-ccccccc----ccC---CCCceEE
Confidence 0 00 00 0000000 000 0112489
Q ss_pred EEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH-HhcccEEE
Q 000503 1225 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRFAVV 1303 (1459)
Q Consensus 1225 f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i~~V 1303 (1459)
++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+... .|++++|+
T Consensus 271 ~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v 343 (510)
T PRK15439 271 VEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYL 343 (510)
T ss_pred EeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEEC
Confidence 999983 2699999999999999999999999999999999999999999999999998776554 46789999
Q ss_pred eCCC---cCCCc-cHHHhcCcC--C--C-C-ChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHH
Q 000503 1304 PQSP---FLFEG-SLRDNLDPF--H--M-N-DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARAL 1372 (1459)
Q Consensus 1304 pQdp---~lf~g-TIReNLdp~--~--~-~-~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQrQrl~LARAL 1372 (1459)
||++ .+|+. |+++|+... . . . ...+ ++..+.+.++.+|++ .........||||||||++||||+
T Consensus 344 ~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrl~la~al 418 (510)
T PRK15439 344 PEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAR-----ENAVLERYRRALNIKFNHAEQAARTLSGGNQQKVLIAKCL 418 (510)
T ss_pred CCChhhCCccCCCcHHHHHHhhhhhhhccccChHH-----HHHHHHHHHHHcCCCCCCccCccccCCcHHHHHHHHHHHH
Confidence 9996 36654 999998432 1 0 0 1111 112234555666775 456666778999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||||++|++|+++..|+++++..+
T Consensus 419 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~~ 493 (510)
T PRK15439 419 EASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAINVD 493 (510)
T ss_pred hhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccCCHH
Confidence 99999999999999999999999999998764 48999999999999986 899999999999999999887643
No 70
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=9.8e-64 Score=625.73 Aligned_cols=447 Identities=22% Similarity=0.298 Sum_probs=333.7
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC--CCeEEEEcC-----------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML--THGSIHASG----------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~--~~G~i~~~~----------- 672 (1459)
++++|+++.|.. .++|+|+||++++|++++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 2 l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~ 75 (500)
T TIGR02633 2 LEMKGIVKTFGG------VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDT 75 (500)
T ss_pred EEEEeEEEEeCC------eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHH
Confidence 578899998852 2359999999999999999999999999999999999987 799999875
Q ss_pred ---cEEEEcCCCCCCCC-CHHHHhccCCCC-------CHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcH
Q 000503 673 ---SIAYVPQVPWILSG-TIRDNILFGKNY-------DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~~-ti~~nI~~g~~~-------~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 737 (1459)
.++|++|+|.++.. |++||+.++..+ +.+ +.+++++.+++.... + .....+||||
T Consensus 76 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~----~~~~~~LSgG 145 (500)
T TIGR02633 76 ERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN------V----TRPVGDYGGG 145 (500)
T ss_pred HhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc------c----cCchhhCCHH
Confidence 38999999987765 999999876421 211 233344444432111 0 1234589999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecC
Q 000503 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1459)
Q Consensus 738 QkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~ 816 (1459)
|||||+||||++.+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+
T Consensus 146 ~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~ 224 (500)
T TIGR02633 146 QQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDI-IRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKD 224 (500)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecC
Confidence 99999999999999999999999999999999988876 33212357899999999999875 99999999999876543
Q ss_pred HHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHHHHhhh
Q 000503 817 SADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFS 896 (1459)
Q Consensus 817 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~ 896 (1459)
.+++. . . . ....+
T Consensus 225 ~~~~~------------------------------------------------~-----~--------~--~~~~~---- 237 (500)
T TIGR02633 225 MSTMS------------------------------------------------E-----D--------D--IITMM---- 237 (500)
T ss_pred cccCC------------------------------------------------H-----H--------H--HHHHH----
Confidence 11000 0 0 0 00000
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 897 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 976 (1459)
Q Consensus 897 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~ 976 (1459)
..
T Consensus 238 -----------------------------~~------------------------------------------------- 239 (500)
T TIGR02633 238 -----------------------------VG------------------------------------------------- 239 (500)
T ss_pred -----------------------------hC-------------------------------------------------
Confidence 00
Q ss_pred HHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 977 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1056 (1459)
Q Consensus 977 ~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~ 1056 (1459)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T TIGR02633 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1057 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFI 1136 (1459)
Q Consensus 1057 ~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~ 1136 (1459)
+
T Consensus 240 -----------------~-------------------------------------------------------------- 240 (500)
T TIGR02633 240 -----------------R-------------------------------------------------------------- 240 (500)
T ss_pred -----------------c--------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCC
Q 000503 1137 ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPD 1216 (1459)
Q Consensus 1137 ~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~ 1216 (1459)
. .. . ..+.+. .+
T Consensus 241 --------------~--~~---~-----------------------------------------~~~~~~-----~~--- 252 (500)
T TIGR02633 241 --------------E--IT---S-----------------------------------------LYPHEP-----HE--- 252 (500)
T ss_pred --------------c--cc---c-----------------------------------------cccccc-----cC---
Confidence 0 00 0 000000 00
Q ss_pred CCCCccEEEEEEEEEecCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-CCceEEECCEeCCCCC-h
Q 000503 1217 WPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-CGGQILVDGLNIINTP-V 1293 (1459)
Q Consensus 1217 wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-~~G~I~IDG~di~~i~-~ 1293 (1459)
+.+-.|+++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+ .
T Consensus 253 -~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~ 331 (500)
T TIGR02633 253 -IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPA 331 (500)
T ss_pred -CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHH
Confidence 011248999999999432 23599999999999999999999999999999999999995 8999999999986543 3
Q ss_pred HHHhcccEEEeCCC---cCCC-ccHHHhcCcCCC--CCh-HHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHH
Q 000503 1294 RDLRGRFAVVPQSP---FLFE-GSLRDNLDPFHM--NDD-LKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQL 1365 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp---~lf~-gTIReNLdp~~~--~~d-~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQr 1365 (1459)
..+|++++++||++ .+|+ .|+++|+..... ... ..+...-.+....+.++.+|+.. ........||||||||
T Consensus 332 ~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGqkqr 411 (500)
T TIGR02633 332 QAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIGRLSGGNQQK 411 (500)
T ss_pred HHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccccCCHHHHHH
Confidence 56788999999996 3666 499999975311 000 00000111122344555556642 3445556899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHH
Q 000503 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1442 (1459)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1442 (1459)
++|||||+++|++|||||||++||..+.+.+++.|++.. ++.|||+|||+++.+.. ||||++|++|+++..++.+++
T Consensus 412 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 412 AVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred HHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 999999999999999999999999999999999998753 47899999999999976 899999999999988766554
No 71
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.3e-61 Score=648.76 Aligned_cols=220 Identities=22% Similarity=0.320 Sum_probs=187.4
Q ss_pred CccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcc
Q 000503 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1299 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1299 (1459)
...|+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++.+ +.+..|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34699999999997533569999999999999999999999999999999999999999999999999975 45677899
Q ss_pred cEEEeCCCcCCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1300 FAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1300 i~~VpQdp~lf~g-TIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
|||+||++.+++. |+||||..+. ..+++++.+. ..+.++.+||+...+.....||||||||+++||||+.+
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~-----v~~lLe~lgL~~~~dk~~~~LSGGqKqRLslA~ALi~~ 2088 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKV-----ANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGC 2088 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999998875 9999996532 1222222211 22344445666555666668999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~-~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
|+||+|||||++||+.+.+.+++.|++. .+++|||++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 2089 P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2089 PPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 9999999999999999999999999886 358999999999999986 899999999999999999999654
No 72
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-61 Score=567.44 Aligned_cols=523 Identities=22% Similarity=0.273 Sum_probs=417.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000503 285 GLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLY 364 (1459)
Q Consensus 285 ~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~ 364 (1459)
.++..+..+....|-.++-..++.+-..+.....+.++++++++.++++++.....+..++.+.++|..|+..+++|..+
T Consensus 6 ~ll~~l~~i~~i~qa~llA~~l~~l~~~~~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~ 85 (559)
T COG4988 6 ALLAVLSGIAIIAQAALLADILTKLIEGQLFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAK 85 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555555666667667666666554433344455677788888899999999999999999999999999999999999
Q ss_pred CCccccCCCChhHHHHHHHhhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 365 VRLAERSEFSDGEIQTFMSVDTDRTVNLAN----SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIAN 440 (1459)
Q Consensus 365 l~~~~~~~~~~g~i~nlms~D~~~i~~~~~----~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~~~~~~~~~~~~ 440 (1459)
++....+..++|++.+++..-++.+...+. .....-..|+-+.++++++.+.-|+..++.+..+.+++ ..+++
T Consensus 86 ~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfM---ilvg~ 162 (559)
T COG4988 86 LGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFM---ILVGL 162 (559)
T ss_pred CChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 998888888999999999999999887433 33344557777888888888776666555544444433 44556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 441 LIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLM----KTRSSEVKHLSTRKYLDAWCVFFWATTPTLFS 516 (1459)
Q Consensus 441 ~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~----~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (1459)
..++..+++++....-.+..-+-|+|+.++|.|+..+...++|. +.|+.-|+.++-.-.-....-++.... +...
T Consensus 163 ~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~ls-iAlv 241 (559)
T COG4988 163 AAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLS-IALV 241 (559)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 66677778888888888889999999999999998766666654 456555555543332223333332222 2222
Q ss_pred HHHHHHHHHhC-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCC
Q 000503 517 LFTFGLFALMG-HQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNG 595 (1459)
Q Consensus 517 ~~~f~~~~~~~-~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~ 595 (1459)
.+.+ .+.+.+ |+++....+.++.+.--+-.|+..+...+..-.++.++.+++..|++.|............
T Consensus 242 Av~~-g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~------- 313 (559)
T COG4988 242 AVYI-GFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEV------- 313 (559)
T ss_pred HHHH-HHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcccccc-------
Confidence 2333 334455 6899999999999999999999999999999999999999999999877543311100000
Q ss_pred CcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC---
Q 000503 596 LSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--- 672 (1459)
Q Consensus 596 ~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--- 672 (1459)
...+...+..+|.+|.|+.. +++++|+||++++|++++|||+||||||||+++|+|+++|++|+|.++|
T Consensus 314 ---~~~~~~ei~~~~l~~~y~~g-----~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l 385 (559)
T COG4988 314 ---ANEPPIEISLENLSFRYPDG-----KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDL 385 (559)
T ss_pred ---ccCCCceeeecceEEecCCC-----CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccc
Confidence 01223445566999999753 1459999999999999999999999999999999999999999999987
Q ss_pred ----------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 ----------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 ----------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
+++||+|+|.||++||||||+++++ -+++...++++..+|.+.++. |+|.+|.+||+|.+|||||+||
T Consensus 386 ~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QR 464 (559)
T COG4988 386 RDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQR 464 (559)
T ss_pred cccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHH
Confidence 5999999999999999999999987 668899999999999999999 9999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 821 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 821 (1459)
|+||||++++++++|||||||+||.++++.|.+. +.. +.+++|+|+||||++.+..+|+|++|++|+++++|+|+++.
T Consensus 465 laLARAll~~~~l~llDEpTA~LD~etE~~i~~~-l~~-l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~ 542 (559)
T COG4988 465 LALARALLSPASLLLLDEPTAHLDAETEQIILQA-LQE-LAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELS 542 (559)
T ss_pred HHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHH-HHH-HHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHh
Confidence 9999999999999999999999999999988887 443 67789999999999999999999999999999999999998
Q ss_pred hccccCccc
Q 000503 822 VSLYSGFWS 830 (1459)
Q Consensus 822 ~~~~~~~~~ 830 (1459)
++.+.+.++
T Consensus 543 ~~~~~y~~l 551 (559)
T COG4988 543 EKQGLYANL 551 (559)
T ss_pred hcCcHHHHH
Confidence 877666544
No 73
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.4e-60 Score=605.60 Aligned_cols=533 Identities=18% Similarity=0.214 Sum_probs=414.2
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 273 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRS 352 (1459)
Q Consensus 273 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~ 352 (1459)
.++.+++.++..+++.++..++..+.|++++.++|.+...... ..+++.+++..++..+......+...++..+++.
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSDV---LPTLALWAGFGVFNTIAYVLVAREADRLAHGRRA 89 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888888899999999999999999999977542211 1111122223333444444445566778888899
Q ss_pred HHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHHH
Q 000503 353 SIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYL---LYTQVKFAFVSGLAIT 428 (1459)
Q Consensus 353 ~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~l---L~~~lg~a~l~~~~v~ 428 (1459)
.+...+|+|.++++...+++.++|++++.++.|++.+..... .+..+...++.+++++++ +.+.+++.++ +++
T Consensus 90 ~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l---~~~ 166 (585)
T TIGR01192 90 TLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLM---VLG 166 (585)
T ss_pred HHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 999999999999999998888999999999999999986543 333444444444333222 2233333332 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 429 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 508 (1459)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 508 (1459)
++...+..++.+++.+..++..+..++..+.+.|.++|+++||.++.|+.+.+++++..++-.+...+..........+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (585)
T TIGR01192 167 ILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLN 246 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344556677777888888888889999999999999999999999998888877765443333333322222222221
Q ss_pred HHH--HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhc
Q 000503 509 ATT--PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 586 (1459)
Q Consensus 509 ~~~--~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 586 (1459)
... -..+.++.+|.|.+.++.++++.+++++.++..+..|+..+...+..+.++..+++|+.++++.++..+....
T Consensus 247 ~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-- 324 (585)
T TIGR01192 247 RMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-- 324 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc--
Confidence 111 1223456678888888999999999999999999999999999999999999999999999975432110000
Q ss_pred CCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCe
Q 000503 587 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 666 (1459)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G 666 (1459)
.+. .+.....++++|++|+|+.+ +++|+|+||++++|+.++|+||||||||||+++|+|+++|++|
T Consensus 325 -~~~--------~~~~~~~i~~~~v~~~y~~~-----~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G 390 (585)
T TIGR01192 325 -APE--------LPNVKGAVEFRHITFEFANS-----SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVG 390 (585)
T ss_pred -CCC--------CCCCCCeEEEEEEEEECCCC-----CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCC
Confidence 000 01123469999999999642 2359999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCc
Q 000503 667 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1459)
Q Consensus 667 ~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 732 (1459)
+|.++| .++||+|+|++|++|++|||.++.+ .++++..++++.+++++.+..+|+|++|.+|++|.
T Consensus 391 ~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~ 470 (585)
T TIGR01192 391 QILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGN 470 (585)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCC
Confidence 999876 5899999999999999999999864 57778888999999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000503 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1459)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~ 812 (1459)
+||||||||++||||++++|+++|||||||+||+++++.+.+. +.. ..+++|+|+|||+++.++.||+|++|++|+++
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~-l~~-~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~ 548 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNA-IDA-LRKNRTTFIIAHRLSTVRNADLVLFLDQGRLI 548 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHH-HHH-HhCCCEEEEEEcChHHHHcCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999998876 433 45689999999999999999999999999999
Q ss_pred EecCHHHHHhccccCcc
Q 000503 813 WIGSSADLAVSLYSGFW 829 (1459)
Q Consensus 813 ~~g~~~~l~~~~~~~~~ 829 (1459)
+.|+++++.++.+.+.+
T Consensus 549 ~~g~~~~l~~~~~~y~~ 565 (585)
T TIGR01192 549 EKGSFQELIQKDGRFYK 565 (585)
T ss_pred EECCHHHHHHCCChHHH
Confidence 99999999876655443
No 74
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-62 Score=616.40 Aligned_cols=202 Identities=19% Similarity=0.305 Sum_probs=170.8
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| ++++
T Consensus 318 ~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 384 (530)
T PRK15064 318 NALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANI 384 (530)
T ss_pred ceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEE
Confidence 36999999999964 3599999999999999999999999999999999999999999999987 3579
Q ss_pred EEEeCCCc--CCC-ccHHHhcCcCCC--CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1301 AVVPQSPF--LFE-GSLRDNLDPFHM--NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1301 ~~VpQdp~--lf~-gTIReNLdp~~~--~~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
+|+||++. +++ .|+++|+..... ..++++.++++. +|+. .........||||||||++||||+++
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~~LSgGq~qrv~la~al~~ 455 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGR---------LLFSQDDIKKSVKVLSGGEKGRMLFGKLMMQ 455 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHH---------cCCChhHhcCcccccCHHHHHHHHHHHHHhc
Confidence 99999984 443 599999864321 122334444444 3553 33455667899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEE-EecChhHHhccC
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-EQGNPQTLLQDE 1446 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~Iv-E~G~p~eLl~~~ 1446 (1459)
+|+||||||||++||+.+.+.+.+.|++. +.|||+|||+++.+.. ||||++|++|+++ +.|+++++++.+
T Consensus 456 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~~ 527 (530)
T PRK15064 456 KPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRSQ 527 (530)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHHh
Confidence 99999999999999999999999999876 4599999999999886 8999999999998 789999987653
No 75
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-63 Score=622.00 Aligned_cols=443 Identities=21% Similarity=0.285 Sum_probs=334.3
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|+. .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~ 77 (501)
T PRK11288 4 YLSFDGIGKTFPG------VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAAL 77 (501)
T ss_pred eEEEeeeEEEECC------EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHH
Confidence 4788999998852 2359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCCC-CHHHHhccCCC------CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHH
Q 000503 673 --SIAYVPQVPWILSG-TIRDNILFGKN------YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1459)
Q Consensus 673 --~i~y~~Q~~~l~~~-ti~~nI~~g~~------~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 739 (1459)
.|+|++|+|.++.. |++||+.++.. .+. ++..++++.+++... ......+||||||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGq~ 146 (501)
T PRK11288 78 AAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDID-----------PDTPLKYLSIGQR 146 (501)
T ss_pred hCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCC-----------cCCchhhCCHHHH
Confidence 38999999988765 99999988631 122 233445555544321 2334568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHH
Q 000503 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 818 (1459)
Q Consensus 740 qRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~ 818 (1459)
|||+||||+..+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..++..
T Consensus 147 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 225 (501)
T PRK11288 147 QMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRV-IRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDM 225 (501)
T ss_pred HHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCcc
Confidence 999999999999999999999999999999988876 33212347899999999999865 9999999999987533100
Q ss_pred HHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHHHHhhhhH
Q 000503 819 DLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGW 898 (1459)
Q Consensus 819 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~ 898 (1459)
+ . . . .+. +.
T Consensus 226 ~-------------~-----------------------------~-----~------~~~-------------~~----- 234 (501)
T PRK11288 226 A-------------Q-----------------------------V-----D------RDQ-------------LV----- 234 (501)
T ss_pred c-------------c-----------------------------C-----C------HHH-------------HH-----
Confidence 0 0 0 0 000 00
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 899 FITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTL 978 (1459)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~l 978 (1459)
..+...
T Consensus 235 ------------------------~~~~~~-------------------------------------------------- 240 (501)
T PRK11288 235 ------------------------QAMVGR-------------------------------------------------- 240 (501)
T ss_pred ------------------------HHhcCC--------------------------------------------------
Confidence 000000
Q ss_pred HHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 979 LTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFF 1058 (1459)
Q Consensus 979 l~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~ 1058 (1459)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK11288 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1059 YRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIIS 1138 (1459)
Q Consensus 1059 y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~ 1138 (1459)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK11288 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCC
Q 000503 1139 FIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWP 1218 (1459)
Q Consensus 1139 ~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp 1218 (1459)
.. .. . ...++. + +
T Consensus 241 ------------~~-~~----------------------------------------~---~~~~~~-------~----~ 253 (501)
T PRK11288 241 ------------EI-GD----------------------------------------I---YGYRPR-------P----L 253 (501)
T ss_pred ------------Cc-cc----------------------------------------c---cccccc-------C----C
Confidence 00 00 0 000000 0 0
Q ss_pred CCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCC-hHHHh
Q 000503 1219 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLR 1297 (1459)
Q Consensus 1219 ~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~lR 1297 (1459)
.+..++++|++++ .+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .+..|
T Consensus 254 ~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 327 (501)
T PRK11288 254 GEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIR 327 (501)
T ss_pred CCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHh
Confidence 1124889999742 4899999999999999999999999999999999999999999999999987543 34567
Q ss_pred cccEEEeCCCc---CCC-ccHHHhcCcCCC-C-ChHHH--HHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHH
Q 000503 1298 GRFAVVPQSPF---LFE-GSLRDNLDPFHM-N-DDLKI--WSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICL 1368 (1459)
Q Consensus 1298 ~~i~~VpQdp~---lf~-gTIReNLdp~~~-~-~d~ei--~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQrQrl~L 1368 (1459)
++++|+||+|. +|+ .|+.+|+..... . ..... ...-++....+.++.+|++ ........+||||||||++|
T Consensus 328 ~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrl~l 407 (501)
T PRK11288 328 AGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIMNLSGGNQQKAIL 407 (501)
T ss_pred CCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCccccCCHHHHHHHHH
Confidence 89999999973 554 699999865311 0 00000 0000111233455555773 34555566899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
|||++.+|++|||||||++||..+.+.+.+.|++.. .+.|||+|||+++.+.. ||||++|++|++++.|+++|..
T Consensus 408 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 408 GRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred HHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 999999999999999999999999999999998764 47899999999999976 8999999999999999998765
No 76
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-62 Score=614.67 Aligned_cols=435 Identities=22% Similarity=0.321 Sum_probs=328.1
Q ss_pred EcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------cE
Q 000503 609 QDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------------SI 674 (1459)
Q Consensus 609 ~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------------~i 674 (1459)
+|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 2 ~nl~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 75 (491)
T PRK10982 2 SNISKSFPG------VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGI 75 (491)
T ss_pred CceEEEeCC------EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 466777642 2359999999999999999999999999999999999999999999876 38
Q ss_pred EEEcCCCCCCC-CCHHHHhccCCC------CCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHH
Q 000503 675 AYVPQVPWILS-GTIRDNILFGKN------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1459)
Q Consensus 675 ~y~~Q~~~l~~-~ti~~nI~~g~~------~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRva 743 (1459)
+|++|++.++. .|++||+.++.. .+.+ +.+++++.+++.. .......+|||||||||+
T Consensus 76 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGq~qrv~ 144 (491)
T PRK10982 76 SMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDI-----------DPRAKVATLSVSQMQMIE 144 (491)
T ss_pred EEEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCC-----------CccCchhhCCHHHHHHHH
Confidence 99999998765 599999987631 1222 2223333333321 223456799999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000503 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
||||+..+|+++||||||++||+.+.+++.+. +.....+++|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 145 lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 223 (491)
T PRK10982 145 IAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTI-IRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTM 223 (491)
T ss_pred HHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCH
Confidence 99999999999999999999999999998776 33312357899999999998865 99999999999987665322100
Q ss_pred ccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHHHHhhhhHHHHH
Q 000503 823 SLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITL 902 (1459)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~ 902 (1459)
.+. .
T Consensus 224 -----------------------------------------------------~~~-------~---------------- 227 (491)
T PRK10982 224 -----------------------------------------------------DKI-------I---------------- 227 (491)
T ss_pred -----------------------------------------------------HHH-------H----------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 903 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 982 (1459)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 982 (1459)
..+..
T Consensus 228 --------------------~~~~~------------------------------------------------------- 232 (491)
T PRK10982 228 --------------------AMMVG------------------------------------------------------- 232 (491)
T ss_pred --------------------HHHhC-------------------------------------------------------
Confidence 00000
Q ss_pred hcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 983 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1062 (1459)
Q Consensus 983 l~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~ 1062 (1459)
T Consensus 233 -------------------------------------------------------------------------------- 232 (491)
T PRK10982 233 -------------------------------------------------------------------------------- 232 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1063 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIAT 1142 (1459)
Q Consensus 1063 sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1142 (1459)
+
T Consensus 233 -----------~-------------------------------------------------------------------- 233 (491)
T PRK10982 233 -----------R-------------------------------------------------------------------- 233 (491)
T ss_pred -----------C--------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCcc
Q 000503 1143 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGL 1222 (1459)
Q Consensus 1143 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~ 1222 (1459)
. .. + ..+.+. .+ +.+..
T Consensus 234 --------~--~~---------------------------------------~-----~~~~~~-----~~----~~~~~ 250 (491)
T PRK10982 234 --------S--LT---------------------------------------Q-----RFPDKE-----NK----PGEVI 250 (491)
T ss_pred --------C--cc---------------------------------------c-----cccccc-----CC----CCCcE
Confidence 0 00 0 000000 00 01125
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChH-HHhcccE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR-DLRGRFA 1301 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~-~lR~~i~ 1301 (1459)
|+++|++++| +++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|+.++
T Consensus 251 i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 326 (491)
T PRK10982 251 LEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFA 326 (491)
T ss_pred EEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCE
Confidence 8999999875 2489999999999999999999999999999999999999999999999999876654 4577899
Q ss_pred EEeCCCc---CCC-ccHHHh-----cCcCCC----CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHH
Q 000503 1302 VVPQSPF---LFE-GSLRDN-----LDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLIC 1367 (1459)
Q Consensus 1302 ~VpQdp~---lf~-gTIReN-----Ldp~~~----~~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQrQrl~ 1367 (1459)
|+||++. +|+ .|+++| +..... .+..+.. ....+.++.+|+. .........||||||||++
T Consensus 327 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~ 401 (491)
T PRK10982 327 LVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMK-----SDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVI 401 (491)
T ss_pred EcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHH-----HHHHHHHHhcCccCCCcccccccCCcHHHHHHH
Confidence 9999963 565 477766 321111 1111111 1223445555663 2345566789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
||||++++|+||||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|+++..++++++.
T Consensus 402 la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 479 (491)
T PRK10982 402 IGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTKTTT 479 (491)
T ss_pred HHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 9999999999999999999999999999999997753 48999999999999876 8999999999999888776544
No 77
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=3.8e-60 Score=598.82 Aligned_cols=469 Identities=19% Similarity=0.230 Sum_probs=349.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhh
Q 000503 953 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAV 1032 (1459)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~ 1032 (1459)
.++.++..+.....+.+...+++.++++++++.|+++|++.++|++++|+++|++.+...+. .+..++..++.+++.++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~ 140 (547)
T PRK10522 62 MAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAA 140 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 44566677788888999999999999999999999999999999999999999999887544 35556666677777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcH---HHHHHHHHHHHH
Q 000503 1033 VLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSE---DYFMAKFKEHVV 1109 (1459)
Q Consensus 1033 ~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e---~~~~~~~~~~~~ 1109 (1459)
++.+.+|.++++++..+.+...+..+..+..+...+...+..+.+.+++.|.++|+++++ ++.+ +.+.+++.+..+
T Consensus 141 ~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~ 219 (547)
T PRK10522 141 YLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQ 219 (547)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHH
Confidence 777778877665554444443343333333333333344566788899999999999995 5443 456777777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1110 LYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKE 1189 (1459)
Q Consensus 1110 ~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~ 1189 (1459)
...+..+...............+.. ..+++..+... .. .....+.++....+...+..++..+...+.++...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~ 292 (547)
T PRK10522 220 EYRHHIIRADTFHLSAVNWSNIMML---GAIGLVFYMAN--SL--GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSA 292 (547)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH--Hh--hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655444322211111111111111 11111111111 00 01122333333334444567888899999999999
Q ss_pred HHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHH
Q 000503 1190 MVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNA 1269 (1459)
Q Consensus 1190 ~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~ 1269 (1459)
..+.+|+.++.+.++|+......+ -|..+.|+++||+|+|++ .+++|+|+||+|+|||++||+|+||||||||+++
T Consensus 293 ~~a~~ri~~l~~~~~~~~~~~~~~---~~~~~~i~~~~v~f~y~~-~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~l 368 (547)
T PRK10522 293 QVAFNKLNKLALAPYKAEFPRPQA---FPDWQTLELRNVTFAYQD-NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAML 368 (547)
T ss_pred HHHHHHHHHHhccccccccccccc---cCcCceEEEEEEEEEeCC-CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 999999999876554321111111 122357999999999974 3469999999999999999999999999999999
Q ss_pred HhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCch
Q 000503 1270 LFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLET 1349 (1459)
Q Consensus 1270 L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt 1349 (1459)
|+|+++|++|+|.+||+|+++++.+++|+++++|||||.+|+||+++| ....+|++++++++++++.+.+.
T Consensus 369 l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~------ 439 (547)
T PRK10522 369 LTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLE------ 439 (547)
T ss_pred HhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhh------
Confidence 999999999999999999999999999999999999999999999999 23456777887887776654432
Q ss_pred hhhc---CCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCE
Q 000503 1350 FVKE---SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDE 1424 (1459)
Q Consensus 1350 ~v~e---~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~~Dr 1424 (1459)
.++ +|.+||||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||++++..||+
T Consensus 440 -~~~~~~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~ 518 (547)
T PRK10522 440 -LEDGRISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADR 518 (547)
T ss_pred -ccccCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCE
Confidence 222 378999999999999999999999999999999999999999999987654 48999999999999999999
Q ss_pred EEEEeCCeEEEe-cChhHHhc
Q 000503 1425 ILILDHGHLVEQ-GNPQTLLQ 1444 (1459)
Q Consensus 1425 IlVl~~G~IvE~-G~p~eLl~ 1444 (1459)
|++|++|+++|. |++.+-..
T Consensus 519 i~~l~~G~i~e~~~~~~~~~~ 539 (547)
T PRK10522 519 LLEMRNGQLSELTGEERDAAS 539 (547)
T ss_pred EEEEECCEEEEecCCchhhhh
Confidence 999999999988 55554443
No 78
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.8e-61 Score=604.99 Aligned_cols=202 Identities=23% Similarity=0.285 Sum_probs=167.5
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ + .++
T Consensus 323 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~i 389 (556)
T PRK11819 323 KVIEAENLSKSFGD--RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VKL 389 (556)
T ss_pred eEEEEEeEEEEECC--eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eEE
Confidence 46999999999964 3599999999999999999999999999999999999999999999954 2 169
Q ss_pred EEEeCCC-cCCCc-cHHHhcCcCCCC----C-hHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHH
Q 000503 1301 AVVPQSP-FLFEG-SLRDNLDPFHMN----D-DLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARAL 1372 (1459)
Q Consensus 1301 ~~VpQdp-~lf~g-TIReNLdp~~~~----~-d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQrl~LARAL 1372 (1459)
+|+||++ .++.. |+++|+...... . +.+.. +.++.+|+.. ........||||||||++||||+
T Consensus 390 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~---------~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al 460 (556)
T PRK11819 390 AYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSR---------AYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTL 460 (556)
T ss_pred EEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHH---------HHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHH
Confidence 9999997 56654 999999653211 1 11111 2344456643 34555668999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeC-CeEEE-ecChhHHhccC
Q 000503 1373 LKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-GHLVE-QGNPQTLLQDE 1446 (1459)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~-G~IvE-~G~p~eLl~~~ 1446 (1459)
+.+|++|||||||++||+.+.+.+.+.|++. + .|||+|||+++.+.. ||+|++|++ |++.+ .|++++++++.
T Consensus 461 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~~ 535 (556)
T PRK11819 461 KQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEEDK 535 (556)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHHH
Confidence 9999999999999999999999999999875 4 499999999999876 899999986 88874 78898887653
No 79
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=4.2e-62 Score=609.48 Aligned_cols=442 Identities=19% Similarity=0.252 Sum_probs=330.5
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|+++.|.. ..+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 4 l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~ 77 (490)
T PRK10938 4 LQISQGTFRLSD------TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQK 77 (490)
T ss_pred EEEEeEEEEcCC------eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHH
Confidence 788999999853 1259999999999999999999999999999999999999999998754
Q ss_pred cEEEEcCCCCC---------CCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHH
Q 000503 673 SIAYVPQVPWI---------LSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1459)
Q Consensus 673 ~i~y~~Q~~~l---------~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRva 743 (1459)
.++|++|++.+ +..|++||+.++.. ++++.+++++..+++... .....+|||||||||+
T Consensus 78 ~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~ 145 (490)
T PRK10938 78 LVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITALL-----------DRRFKYLSTGETRKTL 145 (490)
T ss_pred HhceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhhh-----------hCCcccCCHHHHHHHH
Confidence 27999998753 14599999876532 344566677777665322 2345689999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000503 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
||||+..+|+++||||||++||+...+++.+. +.....+++|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 146 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 224 (490)
T PRK10938 146 LCQALMSEPDLLILDEPFDGLDVASRQQLAEL-LASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQ 224 (490)
T ss_pred HHHHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999988876 33312347899999999998875 99999999999998776554321
Q ss_pred ccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHHHHhhhhHHHHH
Q 000503 823 SLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITL 902 (1459)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~ 902 (1459)
... . .+..+.
T Consensus 225 ~~~--------------------------------------------~-------~~~~~~------------------- 234 (490)
T PRK10938 225 QAL--------------------------------------------V-------AQLAHS------------------- 234 (490)
T ss_pred chh--------------------------------------------h-------hhhhhh-------------------
Confidence 000 0 000000
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 903 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 982 (1459)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 982 (1459)
T Consensus 235 -------------------------------------------------------------------------------- 234 (490)
T PRK10938 235 -------------------------------------------------------------------------------- 234 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 983 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1062 (1459)
Q Consensus 983 l~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~ 1062 (1459)
T Consensus 235 -------------------------------------------------------------------------------- 234 (490)
T PRK10938 235 -------------------------------------------------------------------------------- 234 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1063 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIAT 1142 (1459)
Q Consensus 1063 sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1142 (1459)
+.+ .+.
T Consensus 235 -~~~-------------------~~~------------------------------------------------------ 240 (490)
T PRK10938 235 -EQL-------------------EGV------------------------------------------------------ 240 (490)
T ss_pred -hcc-------------------Ccc------------------------------------------------------
Confidence 000 000
Q ss_pred HHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCcc
Q 000503 1143 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGL 1222 (1459)
Q Consensus 1143 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~ 1222 (1459)
.... ..+.... ...+ .....
T Consensus 241 --------~~~~------------------------------------------------~~~~~~~-~~~~---~~~~~ 260 (490)
T PRK10938 241 --------QLPE------------------------------------------------PDEPSAR-HALP---ANEPR 260 (490)
T ss_pred --------ccCc------------------------------------------------ccccccc-cccC---CCCce
Confidence 0000 0000000 0000 01225
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-CCceEEECCEeCCC-CChHHHhccc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-CGGQILVDGLNIIN-TPVRDLRGRF 1300 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-~~G~I~IDG~di~~-i~~~~lR~~i 1300 (1459)
|+++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.. .+....|+++
T Consensus 261 l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 338 (490)
T PRK10938 261 IVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHI 338 (490)
T ss_pred EEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhc
Confidence 999999999964 3599999999999999999999999999999999998876 69999999987632 2334568899
Q ss_pred EEEeCCCcCCC---ccHHHhcCcC--C---CC--ChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000503 1301 AVVPQSPFLFE---GSLRDNLDPF--H---MN--DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1369 (1459)
Q Consensus 1301 ~~VpQdp~lf~---gTIReNLdp~--~---~~--~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQrl~LA 1369 (1459)
+|+||++.++. -|+++++.+. . .. .+.+. +....+.++.+|++. ........||||||||++||
T Consensus 339 ~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la 413 (490)
T PRK10938 339 GYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQ-----QKLAQQWLDILGIDKRTADAPFHSLSWGQQRLALIV 413 (490)
T ss_pred eEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHH-----HHHHHHHHHHcCCchhhccCchhhCCHHHHHHHHHH
Confidence 99999986542 3677776421 1 01 01110 111234444556765 45555668999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC-C-cEEEEeccChhhHhh--cCEEEEEeCCeEEEec
Q 000503 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK-G-MTVITIAHRISTVLN--MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~-~-~TvI~IaHrl~ti~~--~DrIlVl~~G~IvE~G 1437 (1459)
|||+++|+||||||||++||+++.+.+.+.|++..+ + .|||+|||+++.+.. ||++++|++|++++.-
T Consensus 414 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 414 RALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEee
Confidence 999999999999999999999999999999988643 3 479999999999975 7999999999998764
No 80
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.4e-60 Score=602.25 Aligned_cols=482 Identities=22% Similarity=0.281 Sum_probs=332.3
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--cEEEEcCCCC
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPW 682 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~~~ 682 (1459)
.++++|++++|+.+ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .||||+|+|+
T Consensus 4 ~i~~~nls~~~~~~-----~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~ 78 (552)
T TIGR03719 4 IYTMNRVSKVVPPK-----KEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQ 78 (552)
T ss_pred EEEEeeEEEecCCC-----CeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCC
Confidence 47899999998521 2359999999999999999999999999999999999999999999874 6999999999
Q ss_pred CCC-CCHHHHhccCCC-------------------CC--------HHHHHHHHHHhcchh---hHhhcc--CCCcccccC
Q 000503 683 ILS-GTIRDNILFGKN-------------------YD--------PQSYSETLKACTLDV---DISLMV--GGDMAYIGE 729 (1459)
Q Consensus 683 l~~-~ti~~nI~~g~~-------------------~~--------~~~~~~v~~~~~l~~---di~~~~--~gd~t~ig~ 729 (1459)
++. .|++|||.++.. .+ .+++.++++.++... .+..+- -|.. ....
T Consensus 79 ~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~ 157 (552)
T TIGR03719 79 LDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCP-PWDA 157 (552)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCC-cccC
Confidence 875 599999987521 01 012334444444321 111110 0111 1245
Q ss_pred CCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeC
Q 000503 730 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDK 808 (1459)
Q Consensus 730 ~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~ 808 (1459)
...+|||||||||+||||++.+|+++||||||++||+.+.+++.+. +.. . +.|+|+|||+++++.. ||+|++|++
T Consensus 158 ~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~-L~~-~--~~tvIiisHd~~~~~~~~d~v~~l~~ 233 (552)
T TIGR03719 158 DVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQH-LQE-Y--PGTVVAVTHDRYFLDNVAGWILELDR 233 (552)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHH-HHh-C--CCeEEEEeCCHHHHHhhcCeEEEEEC
Confidence 6679999999999999999999999999999999999999988876 332 2 3699999999999876 999999999
Q ss_pred CeEE-EecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHH
Q 000503 809 GQVK-WIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELT 887 (1459)
Q Consensus 809 G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~ 887 (1459)
|+++ ..|+++++..... . .. + ....+.+..+.
T Consensus 234 g~i~~~~g~~~~~~~~~~-----------~-~~--------------~---------------~~~~~~~~~~~------ 266 (552)
T TIGR03719 234 GRGIPWEGNYSSWLEQKE-----------K-RL--------------E---------------QEEKEESARQK------ 266 (552)
T ss_pred CEEEEecCCHHHHHHHHH-----------H-HH--------------H---------------HHHHHHHHHHH------
Confidence 9975 6788877642100 0 00 0 00000000000
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 888 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 967 (1459)
Q Consensus 888 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 967 (1459)
.+.. ...|...
T Consensus 267 ----~~~~--------------------------~~~~~~~--------------------------------------- 277 (552)
T TIGR03719 267 ----ALKR--------------------------ELEWVRS--------------------------------------- 277 (552)
T ss_pred ----HHHH--------------------------HHHHHHh---------------------------------------
Confidence 0000 0000000
Q ss_pred HHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHH
Q 000503 968 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1047 (1459)
Q Consensus 968 ~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p 1047 (1459)
.+
T Consensus 278 -----------------~~------------------------------------------------------------- 279 (552)
T TIGR03719 278 -----------------SP------------------------------------------------------------- 279 (552)
T ss_pred -----------------hh-------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1048 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1127 (1459)
Q Consensus 1048 l~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 1127 (1459)
.. ++. +. +.
T Consensus 280 -------------~~-~~~------------------------------------~~--------~~------------- 288 (552)
T TIGR03719 280 -------------KA-RQA------------------------------------KS--------KA------------- 288 (552)
T ss_pred -------------hh-HHH------------------------------------HH--------HH-------------
Confidence 00 000 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCccc
Q 000503 1128 RLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY-MDVPQEE 1206 (1459)
Q Consensus 1128 ~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~-~~~~~e~ 1206 (1459)
.....++..+. ...+++.
T Consensus 289 -------------------------------------------------------------~~~~~~~~~~~~~~~~~~~ 307 (552)
T TIGR03719 289 -------------------------------------------------------------RLARYEELLSQEFQKRNET 307 (552)
T ss_pred -------------------------------------------------------------HHHHHHhhhhhcccccCCC
Confidence 00000000000 0000000
Q ss_pred cccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCE
Q 000503 1207 LCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL 1286 (1459)
Q Consensus 1207 ~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~ 1286 (1459)
... ..+...-+.+..++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+++
T Consensus 308 ~~~-~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~- 383 (552)
T TIGR03719 308 AEI-YIPPGPRLGDKVIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE- 383 (552)
T ss_pred cee-ecCCCCCCCCeEEEEeeEEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-
Confidence 000 000000011235999999999964 3599999999999999999999999999999999999999999999964
Q ss_pred eCCCCChHHHhcccEEEeCCCc-CCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCCh
Q 000503 1287 NIINTPVRDLRGRFAVVPQSPF-LFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSV 1360 (1459)
Q Consensus 1287 di~~i~~~~lR~~i~~VpQdp~-lf~-gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSg 1360 (1459)
+ .+++|+||++. +++ -|+++|+..... ....+. ...+.++.+|++. ........|||
T Consensus 384 ~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~-------~~~~~l~~~~l~~~~~~~~~~~LSg 446 (552)
T TIGR03719 384 T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREV-------PSRAYVGRFNFKGSDQQKKVGQLSG 446 (552)
T ss_pred c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchH-------HHHHHHHhCCCChhHhcCchhhCCH
Confidence 2 16999999973 665 499999965321 111110 0123444556653 34555668999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeC-CeEEE-ec
Q 000503 1361 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-GHLVE-QG 1437 (1459)
Q Consensus 1361 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~-G~IvE-~G 1437 (1459)
|||||++||||++.+|++|||||||++||..+.+.+.+.|++. . .|||+|||+++.+.. ||+|++|++ |++++ .|
T Consensus 447 Ge~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 447 GERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCC
Confidence 9999999999999999999999999999999999999999876 3 499999999999886 899999987 68874 58
Q ss_pred ChhHHhcc
Q 000503 1438 NPQTLLQD 1445 (1459)
Q Consensus 1438 ~p~eLl~~ 1445 (1459)
+++++.+.
T Consensus 525 ~~~~~~~~ 532 (552)
T TIGR03719 525 NYSEYEED 532 (552)
T ss_pred CHHHHHHH
Confidence 88777643
No 81
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.2e-60 Score=530.60 Aligned_cols=460 Identities=25% Similarity=0.358 Sum_probs=345.8
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------ 672 (1459)
..+.++|.+..+.... ....++++|||++.+||.+++||.||||||-..++++|+++. -+|+|..+|
T Consensus 5 ~lL~v~nLsV~f~~~~--~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~ 82 (534)
T COG4172 5 PLLSIRNLSVAFHQEG--GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAA 82 (534)
T ss_pred cceeeeccEEEEecCC--cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcC
Confidence 3467788777776432 234579999999999999999999999999999999999875 367888776
Q ss_pred -----------cEEEEcCCCCC-CCC--CHHHHh----ccCCCCC----HHHHHHHHHHhcchhhHhhccCCCcccccCC
Q 000503 673 -----------SIAYVPQVPWI-LSG--TIRDNI----LFGKNYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1459)
Q Consensus 673 -----------~i~y~~Q~~~l-~~~--ti~~nI----~~g~~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~ 730 (1459)
+|+.++|+|-- .|. ||...| ...+..+ +++..+.++..++.+- ...+...
T Consensus 83 se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~y 154 (534)
T COG4172 83 SERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAY 154 (534)
T ss_pred CHHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhC
Confidence 69999999952 232 555444 3433333 2344455555555321 1234556
Q ss_pred CcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCC
Q 000503 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKG 809 (1459)
Q Consensus 731 g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G 809 (1459)
...|||||||||-||.||..+|++||-||||.|||..+..+|++-+-.-....|..++++||++..+.. ||+|+||.+|
T Consensus 155 PHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G 234 (534)
T COG4172 155 PHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHG 234 (534)
T ss_pred CcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEecc
Confidence 679999999999999999999999999999999999999999986322113347799999999999986 9999999999
Q ss_pred eEEEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHH
Q 000503 810 QVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVY 889 (1459)
Q Consensus 810 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 889 (1459)
+++|.|+.+++-..... .|
T Consensus 235 ~ivE~~~t~~lF~~PqH-------------------------------------------------------------pY 253 (534)
T COG4172 235 EIVETGTTETLFAAPQH-------------------------------------------------------------PY 253 (534)
T ss_pred EEeecCcHHHHhhCCCC-------------------------------------------------------------hH
Confidence 99998876554221000 00
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 890 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLR 969 (1459)
Q Consensus 890 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 969 (1459)
T Consensus 254 -------------------------------------------------------------------------------- 253 (534)
T COG4172 254 -------------------------------------------------------------------------------- 253 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHH
Q 000503 970 AAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFW 1049 (1459)
Q Consensus 970 ~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~ 1049 (1459)
T Consensus 254 -------------------------------------------------------------------------------- 253 (534)
T COG4172 254 -------------------------------------------------------------------------------- 253 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1050 FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL 1129 (1459)
Q Consensus 1050 ~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l 1129 (1459)
.+ ++
T Consensus 254 ----------Tr---~L--------------------------------------------------------------- 257 (534)
T COG4172 254 ----------TR---KL--------------------------------------------------------------- 257 (534)
T ss_pred ----------HH---HH---------------------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccccc
Q 000503 1130 QLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCG 1209 (1459)
Q Consensus 1130 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~ 1209 (1459)
++ .|+. +
T Consensus 258 ----------------------------------------------------------------------l~--aeP~-g 264 (534)
T COG4172 258 ----------------------------------------------------------------------LA--AEPS-G 264 (534)
T ss_pred ----------------------------------------------------------------------Hh--cCCC-C
Confidence 00 0000 0
Q ss_pred CCCCCCCCCCCccEEEEEEEEEecCC---------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCce
Q 000503 1210 YQSLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQ 1280 (1459)
Q Consensus 1210 ~~~~~~~wp~~g~I~f~nVs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~ 1280 (1459)
..+|..-...-.++.+||...|+-. .-.+.++|||+.++||.+||||+||||||||-.+|+|+++++ |+
T Consensus 265 -~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~ 342 (534)
T COG4172 265 -DPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GE 342 (534)
T ss_pred -CCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ce
Confidence 0011111122357778888887522 124789999999999999999999999999999999999976 99
Q ss_pred EEECCEeCCCCChHH---HhcccEEEeCCCcC-CC--ccHHHhcC----cCC-CCC----hHHHHHHHHHhcHHHHHHhC
Q 000503 1281 ILVDGLNIINTPVRD---LRGRFAVVPQSPFL-FE--GSLRDNLD----PFH-MND----DLKIWSVLEKCHVKEEVEAV 1345 (1459)
Q Consensus 1281 I~IDG~di~~i~~~~---lR~~i~~VpQdp~l-f~--gTIReNLd----p~~-~~~----d~ei~~aL~~~~l~~~i~~l 1345 (1459)
|..+|.||...+.++ +|+++-+|+|||+= ++ -||-+-+. ... ..+ |+.+.+||+.+||+...
T Consensus 343 I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~--- 419 (534)
T COG4172 343 IRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPAT--- 419 (534)
T ss_pred EEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhH---
Confidence 999999999888665 57899999999971 21 25444332 222 112 34566666666544322
Q ss_pred CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-c
Q 000503 1346 GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-M 1422 (1459)
Q Consensus 1346 GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~ 1422 (1459)
...-...|||||||||+||||++-+|++++||||||+||..-...|.+.+++.- .+-+-++|+|+|..++. |
T Consensus 420 -----r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~ 494 (534)
T COG4172 420 -----RNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALC 494 (534)
T ss_pred -----hhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhh
Confidence 234455799999999999999999999999999999999999999999998763 47799999999999987 8
Q ss_pred CEEEEEeCCeEEEecChhHHhccCCcHHHHH
Q 000503 1423 DEILILDHGHLVEQGNPQTLLQDECSVFSSF 1453 (1459)
Q Consensus 1423 DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l 1453 (1459)
|+|+||.+|+|||+|+-+++++++...|.+-
T Consensus 495 ~~viVm~~GkiVE~G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 495 HRVIVMRDGKIVEQGPTEAVFANPQHEYTRA 525 (534)
T ss_pred ceEEEEeCCEEeeeCCHHHHhcCCCcHHHHH
Confidence 9999999999999999999999998877653
No 82
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.3e-59 Score=539.46 Aligned_cols=513 Identities=23% Similarity=0.279 Sum_probs=408.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc--CCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000503 289 VVNDSIGFAGPLLLNKLIKFLQQ--GSG--HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLY 364 (1459)
Q Consensus 289 l~~~~~~~~~P~ll~~li~~~~~--~~~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~ 364 (1459)
+..-.+...+|++++.+++.+.. ..+ .......+.+++++.++.+++.-........+..++-......+|++.+.
T Consensus 40 ~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ 119 (591)
T KOG0057|consen 40 LGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMS 119 (591)
T ss_pred HhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33356677899999999998864 222 22334556667777788888887778888888888888889999999999
Q ss_pred CCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 000503 365 VRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILL-IPVNKWIANLI 442 (1459)
Q Consensus 365 l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~~~-~~~~~~~~~~~ 442 (1459)
++.+.+.+..+|++.+.|..-...|..... .+..+....+++.++...+++..|.+..+...+.+.. ......+..+-
T Consensus 120 ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~R 199 (591)
T KOG0057|consen 120 LDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWR 199 (591)
T ss_pred hhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHH
Confidence 999999889999999999888888887654 4566777888899988899999998766544433333 33344556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000503 443 ANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTL-FSLFTFG 521 (1459)
Q Consensus 443 ~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~-~~~~~f~ 521 (1459)
.+.+++.+++.++..+..-+.|.|-.+||.|+-|+...++....-.+--+...+.....++.++. ...+ ....++.
T Consensus 200 n~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfg---Q~~iFsv~~~~i 276 (591)
T KOG0057|consen 200 NRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFG---QKAIFSVALTFI 276 (591)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHH---HHHHHHHHHHHH
Confidence 78899999999999999999999999999999999988887665322222222222222222222 1111 1222333
Q ss_pred HH----HHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCc
Q 000503 522 LF----ALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLS 597 (1459)
Q Consensus 522 ~~----~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~ 597 (1459)
.| -+.++.+|.+...-.-+++.+|..|+..|...+..+.++..-++-.....+.++ + .+....|.
T Consensus 277 m~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~--~--i~~~~~~i------- 345 (591)
T KOG0057|consen 277 MVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDE--D--IQEAALPI------- 345 (591)
T ss_pred HHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhh--h--hhhccCCc-------
Confidence 33 245668999999999999999999999999999998888887765543332111 1 11100111
Q ss_pred ccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----
Q 000503 598 NFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----- 672 (1459)
Q Consensus 598 ~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----- 672 (1459)
...+..|+|+|++|+|.++ +++|+++||+||+||.+||+|+|||||||++++|+++++ ++|+|.++|
T Consensus 346 --~~~~~~I~F~dV~f~y~~k-----~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~ 417 (591)
T KOG0057|consen 346 --ELFGGSIEFDDVHFSYGPK-----RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKE 417 (591)
T ss_pred --ccCCCcEEEEeeEEEeCCC-----CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhh
Confidence 1234569999999999742 446999999999999999999999999999999999999 999999998
Q ss_pred --------cEEEEcCCCCCCCCCHHHHhccCCCC-CHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHH
Q 000503 673 --------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1459)
Q Consensus 673 --------~i~y~~Q~~~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRva 743 (1459)
.||||||+..|||+||.+||.+|++. .+++..++++..++++-+..+|+|++|.+||+|..|||||||||+
T Consensus 418 ~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvs 497 (591)
T KOG0057|consen 418 VSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVS 497 (591)
T ss_pred hChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHH
Confidence 49999999999999999999999864 566777888888999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhc
Q 000503 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 823 (1459)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 823 (1459)
||||+.++|+|+++|||||+||.+|++.+++. +.+ ...+||+|+|.||++.++.+|+|+++++|++.+.|+++|++..
T Consensus 498 laRa~lKda~Il~~DEaTS~LD~~TE~~i~~~-i~~-~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~ 575 (591)
T KOG0057|consen 498 LARAFLKDAPILLLDEATSALDSETEREILDM-IMD-VMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAP 575 (591)
T ss_pred HHHHHhcCCCeEEecCcccccchhhHHHHHHH-HHH-hcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhh
Confidence 99999999999999999999999999999998 455 6789999999999999999999999999999999999999874
Q ss_pred cc
Q 000503 824 LY 825 (1459)
Q Consensus 824 ~~ 825 (1459)
.+
T Consensus 576 s~ 577 (591)
T KOG0057|consen 576 SE 577 (591)
T ss_pred hh
Confidence 43
No 83
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=8.8e-59 Score=638.69 Aligned_cols=545 Identities=19% Similarity=0.182 Sum_probs=399.6
Q ss_pred chHHHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 268 SLVRAICCAYGYPYIC-LGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSK 345 (1459)
Q Consensus 268 ~l~~~l~~~~~~~~~~-~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 345 (1459)
+.++..+++.++.... .+++.++..++....|+.++...+... +.......+. .+.++++.++..++.....+....
T Consensus 953 ~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~-~~iy~~l~i~~~~~~~~~~~~~~~ 1031 (1522)
T TIGR00957 953 SVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLR-LSVYGALGILQGFAVFGYSMAVSI 1031 (1522)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555443322 233444555667778888876665321 1111111221 122333333344444334455566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000503 346 LKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSG 424 (1459)
Q Consensus 346 ~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~ 424 (1459)
.+.+.-..+...+|+|.++.+...++..+.|+++|+++.|++.+..... .+..+...++.++.++.++.....+.+++.
T Consensus 1032 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~ 1111 (1522)
T TIGR00957 1032 GGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVII 1111 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888999999999999999999999999999999999987544 455555666666555544443333333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1459)
Q Consensus 425 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1459)
++++++...+..+..+..+..++...+.++...+..+|.++|+++||.||+|+.|.++..+..+...+..........+.
T Consensus 1112 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1191 (1522)
T TIGR00957 1112 PPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWL 1191 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233333334444444455555566666777899999999999999999999988887766554444433322223332
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhh
Q 000503 505 VFFWATTPTLFSLFTFGLFAL-MGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 583 (1459)
Q Consensus 505 ~~~~~~~~~~~~~~~f~~~~~-~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 583 (1459)
.........+ .++..+.+.+ ..+.+++|.+..++.+...+..|+..+...+..+..+.+|.+||.+|++.++..+...
T Consensus 1192 ~~~~~~~~~~-~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~ 1270 (1522)
T TIGR00957 1192 AVRLECVGNC-IVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQI 1270 (1522)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 2221111111 1222233333 3567999999999999999999999999999999999999999999997654321100
Q ss_pred hhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC
Q 000503 584 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 663 (1459)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~ 663 (1459)
. ...++. . -+.++.|+++|++|+|+++. +++|+|+||+|++||.++|||++|||||||+++|+|.++|
T Consensus 1271 ~-~~~~~~------~-wp~~g~I~f~nVsf~Y~~~~----~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~ 1338 (1522)
T TIGR00957 1271 Q-ETAPPS------G-WPPRGRVEFRNYCLRYREDL----DLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES 1338 (1522)
T ss_pred c-CCCCCC------C-CCCCCcEEEEEEEEEeCCCC----cccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC
Confidence 0 000000 0 02346799999999997532 2469999999999999999999999999999999999999
Q ss_pred CCeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCC
Q 000503 664 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1459)
Q Consensus 664 ~~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~ 730 (1459)
++|+|.++| +|+||||+|.||+|||||||....++++++..++++.|++++.+..+|+|.+|.+||+
T Consensus 1339 ~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1339 AEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred CCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 999999987 5999999999999999999983347888899999999999999999999999999999
Q ss_pred CcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000503 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1459)
Q Consensus 731 g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~ 810 (1459)
|.+||||||||++||||++++|+|+|||||||+||+++++.|.+. +.. ..+++|+|+|+||++.+..||+|++|++|+
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~-l~~-~~~~~TvI~IAHRl~ti~~~DrIlVld~G~ 1496 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQST-IRT-QFEDCTVLTIAHRLNTIMDYTRVIVLDKGE 1496 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999887766 443 567899999999999999999999999999
Q ss_pred EEEecCHHHHHhccccCc
Q 000503 811 VKWIGSSADLAVSLYSGF 828 (1459)
Q Consensus 811 i~~~g~~~~l~~~~~~~~ 828 (1459)
|++.|+|+|++++.+.+.
T Consensus 1497 IvE~G~~~eLl~~~~~f~ 1514 (1522)
T TIGR00957 1497 VAEFGAPSNLLQQRGIFY 1514 (1522)
T ss_pred EEEECCHHHHHhCCCHHH
Confidence 999999999987654443
No 84
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-59 Score=597.52 Aligned_cols=200 Identities=22% Similarity=0.343 Sum_probs=164.5
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
..|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++. .++
T Consensus 311 ~~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 311 PLLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred ceEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 36999999999964 45999999999999999999999999999999999999999999999741 269
Q ss_pred EEEeCCC--cCCC-ccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1301 AVVPQSP--FLFE-GSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1301 ~~VpQdp--~lf~-gTIReNLdp~~-~~~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
+|+||++ .+.. .|+.+++.... ...++++. +.+..+|+.. ........||||||||++||||++++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~ 448 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLR---------DYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQR 448 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHH---------HHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 9999985 2433 37777763211 11122333 3344445543 34555568999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEE-EecChhHHhc
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-EQGNPQTLLQ 1444 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~Iv-E~G~p~eLl~ 1444 (1459)
|++|||||||++||..+...+.+.|++. . .|||+|||+++.+.. ||||++|++|+++ ..|++++..+
T Consensus 449 p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 449 PNLLLLDEPTNHLDLDMRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 9999999999999999999999999876 4 599999999999976 8999999999998 6799988743
No 85
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.7e-58 Score=592.66 Aligned_cols=548 Identities=22% Similarity=0.277 Sum_probs=405.2
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCC-CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 887 TVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSS-QTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 965 (1459)
Q Consensus 887 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 965 (1459)
++.+..++..+|..+...++..+. .......+..+....+..... .+......|+...++..++..++.....+....
T Consensus 190 sl~~al~~~f~~~~~~~~~~~~~~-~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~ 268 (1381)
T KOG0054|consen 190 SLLRALLRTFGRTFLLSGIFLFLR-DLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFR 268 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 344445555555554444333333 333566677776665543322 222233445556666666666666666667777
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHH
Q 000503 966 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1045 (1459)
Q Consensus 966 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1045 (1459)
.+.|....+-..+++|.++.+-..-..++.|+|+|-++.|.+.+++..++....+...+-.+++...+.-...+ .+++.
T Consensus 269 ~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~-sa~~G 347 (1381)
T KOG0054|consen 269 VGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGP-SALAG 347 (1381)
T ss_pred hhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-HHHHH
Confidence 88888888889999999999988888899999999999999999998887766665555444333332222222 22222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1046 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1125 (1459)
Q Consensus 1046 ~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl 1125 (1459)
+.+++++.-++.+..+..+..++.....+.......+|.++|+++||.|+||+.|.++..+.-+.-.+........+.+.
T Consensus 348 ~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~ 427 (1381)
T KOG0054|consen 348 VAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALN 427 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333333344444444444444445555556678999999999999999999999988765554333322222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 000503 1126 SLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQE 1205 (1459)
Q Consensus 1126 ~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e 1205 (1459)
... ......++.++.+.+... ...+..++..+..++++.-.+..++..+......+-++.+|++|+.+|+..++.
T Consensus 428 ~~~-~~~~p~lv~~~tF~~~v~----~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~ 502 (1381)
T KOG0054|consen 428 SFL-NFFSPVLVSVVTFVVFVL----LLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEEL 502 (1381)
T ss_pred HHH-HHHHHHHHHHHHHHHHhh----ccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 111 111222222222222110 112345677777788888888888888888888888999999999999976543
Q ss_pred ccccCCCCCCCCCCCccEEEEEEEEEecCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEEC
Q 000503 1206 ELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD 1284 (1459)
Q Consensus 1206 ~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~ID 1284 (1459)
+...... .+.-+.+..|+++|.+|+++++ .++.|+||||+|++||.+||||++|||||||+++|+|-++..+|++.++
T Consensus 503 ~~~~~~~-~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~ 581 (1381)
T KOG0054|consen 503 DPDSVER-SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVN 581 (1381)
T ss_pred Ccccccc-CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEc
Confidence 3211111 1222345579999999999864 4459999999999999999999999999999999999999999999998
Q ss_pred CEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhH
Q 000503 1285 GLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1362 (1459)
Q Consensus 1285 G~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQ 1362 (1459)
|. ++||||.|++|+|||||||.++.+++++...++++.|+|++.++.+ |-.|+|||+|.||||||
T Consensus 582 gs-------------iaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQ 648 (1381)
T KOG0054|consen 582 GS-------------VAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQ 648 (1381)
T ss_pred Ce-------------EEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhH
Confidence 84 9999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHH-HHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhH
Q 000503 1363 RQLICLARALLKSSKVLCLDECTANVDAQTAS-ILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQT 1441 (1459)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~-~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~e 1441 (1459)
||||+||||+.++++|++||+|-|+||+++.+ .+.++|+...++||+|.|||.++.+..||.|+||++|+|+|.|+|+|
T Consensus 649 KqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~e 728 (1381)
T KOG0054|consen 649 KQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEE 728 (1381)
T ss_pred HHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHH
Confidence 99999999999999999999999999999977 55678888889999999999999999999999999999999999999
Q ss_pred HhccCCcHHHHHHHh
Q 000503 1442 LLQDECSVFSSFVRA 1456 (1459)
Q Consensus 1442 Ll~~~~~~f~~l~~~ 1456 (1459)
|++. ++.|.++.++
T Consensus 729 l~~~-~~~~~~l~~~ 742 (1381)
T KOG0054|consen 729 LLKS-GGDFAELAHE 742 (1381)
T ss_pred HHhc-chhHHHHhhc
Confidence 9974 5688887544
No 86
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=4.1e-58 Score=587.18 Aligned_cols=203 Identities=24% Similarity=0.307 Sum_probs=165.0
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +++
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 5899999999964 35999999999999999999999999999999999999999999999 4332 699
Q ss_pred EEeCCC-cCCCc-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1302 VVPQSP-FLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1302 ~VpQdp-~lf~g-TIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
|++|++ .+++. |+++|+..... ...... ...+.+.+..+|+.. ........||||||||++||||++++|+
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~~~p~ 460 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGR-----PRHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKPSN 460 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccch-----HHHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCC
Confidence 999986 46655 99999965321 110000 011233344445542 3444556799999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe-CCeEEEe-cChhHHhc
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD-HGHLVEQ-GNPQTLLQ 1444 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~-~G~IvE~-G~p~eLl~ 1444 (1459)
+|||||||++||..+.+.+.+.|++. +.|||+|||+.+.+.. ||+|++|+ +|++.++ |++++.++
T Consensus 461 lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 461 LLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred EEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999875 5699999999999876 89999998 8999875 78888754
No 87
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.4e-57 Score=615.54 Aligned_cols=211 Identities=20% Similarity=0.299 Sum_probs=172.6
Q ss_pred cEEEEEEEEEecC-----------CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC--CCceEEECCEeC
Q 000503 1222 LIEFQNVTMRYKP-----------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNI 1288 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~-----------~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~--~~G~I~IDG~di 1288 (1459)
.+.|+||++.++. +...+|+|||++++|||.+||+||||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6999999988742 123699999999999999999999999999999999999863 689999999886
Q ss_pred CCCChHHHhcccEEEeCCCcCCCc-cHHHhcCcCC------CCChHH----HHHHHHHhcHHHHHHhCCCchhhhcCC-C
Q 000503 1289 INTPVRDLRGRFAVVPQSPFLFEG-SLRDNLDPFH------MNDDLK----IWSVLEKCHVKEEVEAVGLETFVKESG-I 1356 (1459)
Q Consensus 1289 ~~i~~~~lR~~i~~VpQdp~lf~g-TIReNLdp~~------~~~d~e----i~~aL~~~~l~~~i~~lGLdt~v~e~G-~ 1356 (1459)
. ....|+.++||+|++.+++. |+||||.+.. ..++++ +.++++..+|.+. .|+.+|..+ .
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-----~~~~vg~~~~~ 1018 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-----KDAIVGLPGVT 1018 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-----hCCccCCCCCC
Confidence 4 34567889999999988765 9999996421 112222 3444555544432 255565433 5
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-H-hhcCEEEEEeC-Ce
Q 000503 1357 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDH-GH 1432 (1459)
Q Consensus 1357 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~t-i-~~~DrIlVl~~-G~ 1432 (1459)
.||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +++|||+++|+++. + ..||++++|++ |+
T Consensus 1019 ~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~ 1098 (1470)
T PLN03140 1019 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1098 (1470)
T ss_pred CcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCE
Confidence 799999999999999999999999999999999999999999998864 48999999999984 3 56899999996 89
Q ss_pred EEEecChh
Q 000503 1433 LVEQGNPQ 1440 (1459)
Q Consensus 1433 IvE~G~p~ 1440 (1459)
++++|++.
T Consensus 1099 ~v~~G~~~ 1106 (1470)
T PLN03140 1099 VIYSGPLG 1106 (1470)
T ss_pred EEEECCcc
Confidence 99999974
No 88
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-56 Score=517.31 Aligned_cols=539 Identities=19% Similarity=0.228 Sum_probs=387.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 270 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSG--HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 347 (1459)
Q Consensus 270 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 347 (1459)
++...+ .++.++.++++.++..+....-=++-..+|..-.-... .-.-++-+++.=+..+.+++..+.-........
T Consensus 8 i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~At 86 (573)
T COG4987 8 LRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHDAT 86 (573)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 334444 56666666665554443333322333333322111111 112222334444556777777666666677788
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHhHHHHHHHH
Q 000503 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAW-SLP-FQIGVALYLLYTQVKFAFVSGL 425 (1459)
Q Consensus 348 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~-~~p-~~i~i~~~lL~~~lg~a~l~~~ 425 (1459)
.++-+.+.-.+|+|....+......+.+|++.|.+..|++.+++...-+..-| .+. +.+++++.+-+..++.+.+.++
T Consensus 87 frvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~ 166 (573)
T COG4987 87 FRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGL 166 (573)
T ss_pred HHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 89999999999999999998888888999999999999999998654433322 222 2233334444667777777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 426 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 505 (1459)
Q Consensus 426 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 505 (1459)
...+..+.+...+.+.-++..++..+.+..--+.+.+.+.|....+++|.++.+.+.+++.-..-.+.-++...+..+..
T Consensus 167 ~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~ 246 (573)
T COG4987 167 ILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSD 246 (573)
T ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555555566665666666666666667778899999999999999999888776543333333333333333333
Q ss_pred HHHHHHHHHH---HHHHHHHHHHhCCCCC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchh
Q 000503 506 FFWATTPTLF---SLFTFGLFALMGHQLD-AAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 581 (1459)
Q Consensus 506 ~~~~~~~~~~---~~~~f~~~~~~~~~Lt-~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~ 581 (1459)
++..+...+. .+++++.-. -.|..+ +..+...+..|..+..-....|..+..+.+...|.+|+.+.++.++....
T Consensus 247 a~~~l~~g~~v~~~l~w~a~~~-~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~ 325 (573)
T COG4987 247 AILLLIAGLLVIGLLLWMAAQV-GAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTF 325 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-cCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCC
Confidence 3322221111 122222211 123344 33333333334433322222237778889999999999999876543221
Q ss_pred hhhhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000503 582 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 661 (1459)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~ 661 (1459)
. . ... ...+..++++|++|+|+..+ .++|+|+||++++||.++|+|++|||||||++.|.|.+
T Consensus 326 ~-~-~~~-----------~~~~~~l~~~~vsF~y~~~~----~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~ 388 (573)
T COG4987 326 P-D-EQT-----------ATTGQALELRNVSFTYPGQQ----TKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAW 388 (573)
T ss_pred C-c-ccc-----------CCccceeeeccceeecCCCc----cchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhcc
Confidence 1 0 000 11223789999999998542 34699999999999999999999999999999999999
Q ss_pred cCCCeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccc
Q 000503 662 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYI 727 (1459)
Q Consensus 662 ~~~~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~i 727 (1459)
+|++|+|..+| .|++++|.+.+|++|+|||+..+++ -++|...++++..+|++-++..|+|.+|.+
T Consensus 389 ~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~l 468 (573)
T COG4987 389 DPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWL 468 (573)
T ss_pred CCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchh
Confidence 99999999987 5899999999999999999999986 467888999999999999999999999999
Q ss_pred cCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEe
Q 000503 728 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMD 807 (1459)
Q Consensus 728 g~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~ 807 (1459)
||+|..||||||||+||||++.+|++++||||||.+||+.|++++++. +.. ..++||+|+||||+..++.+|+|++|+
T Consensus 469 ge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~l-l~~-~~~~kTll~vTHrL~~le~~drIivl~ 546 (573)
T COG4987 469 GEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLAL-LFE-HAEGKTLLMVTHRLRGLERMDRIIVLD 546 (573)
T ss_pred ccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHH-HHH-HhcCCeEEEEecccccHhhcCEEEEEE
Confidence 999999999999999999999999999999999999999999999987 444 577999999999999999999999999
Q ss_pred CCeEEEecCHHHHHhccccCcc
Q 000503 808 KGQVKWIGSSADLAVSLYSGFW 829 (1459)
Q Consensus 808 ~G~i~~~g~~~~l~~~~~~~~~ 829 (1459)
+|+++++|+|.+++.+++.+.+
T Consensus 547 ~Gkiie~G~~~~Ll~~~g~~~~ 568 (573)
T COG4987 547 NGKIIEEGTHAELLANNGRYKR 568 (573)
T ss_pred CCeeeecCCHHhhhccccHHHH
Confidence 9999999999999886665543
No 89
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.1e-56 Score=611.24 Aligned_cols=475 Identities=18% Similarity=0.199 Sum_probs=357.1
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000503 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLA 426 (1459)
Q Consensus 348 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~ 426 (1459)
.+....+...+|++.++.+...++..+.|+++|.++.|++.+...+. .+..+....+.++.++.++.....+.+++.+.
T Consensus 1027 ~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~ 1106 (1560)
T PTZ00243 1027 RRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALVP 1106 (1560)
T ss_pred HHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345677889999999999999999999999999999999988544 34555555555554444433332233222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 427 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 506 (1459)
Q Consensus 427 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 506 (1459)
++++...+..++.+..+..++......+.-.+.++|.++|+++||.|++|+.+.++..+.-+...+...+......+...
T Consensus 1107 ~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~ 1186 (1560)
T PTZ00243 1107 CGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGV 1186 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233333444455555666666677777889999999999999999999998888766544444433332222222222
Q ss_pred HHHHH--HHHHHHHHHHHH--HHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCch--
Q 000503 507 FWATT--PTLFSLFTFGLF--ALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH-- 580 (1459)
Q Consensus 507 ~~~~~--~~~~~~~~f~~~--~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~-- 580 (1459)
..... ...+.++.++++ ....+.++++.+..++.+...+..|+..+...+..+..+..|++||.+|++..+.++
T Consensus 1187 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~ 1266 (1560)
T PTZ00243 1187 RVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMP 1266 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 11111 111112222222 223345789988888888899999999999999999999999999999996322111
Q ss_pred hhhh-------hcCCCCc------ccCC--C--cccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEE
Q 000503 581 ELEQ-------AANSPSY------ISNG--L--SNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVI 643 (1459)
Q Consensus 581 ~~~~-------~~~~~~~------~~~~--~--~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~iv 643 (1459)
.... ....+.+ .... . .......+.|+|+|++|+|+++. +++|+|+||+|++||.++||
T Consensus 1267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~----~~vL~~vsf~I~~GekVaIV 1342 (1560)
T PTZ00243 1267 ELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGL----PLVLRGVSFRIAPREKVGIV 1342 (1560)
T ss_pred cccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCC----CceeecceEEECCCCEEEEE
Confidence 0000 0000000 0000 0 00011235799999999997531 23699999999999999999
Q ss_pred cCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHh
Q 000503 644 GEVGSGKSSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKAC 710 (1459)
Q Consensus 644 G~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~ 710 (1459)
|++|||||||+++|+|.++|++|+|.++| .|+|+||+|.||+|||||||..+.++++++..++++.|
T Consensus 1343 GrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a 1422 (1560)
T PTZ00243 1343 GRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELV 1422 (1560)
T ss_pred CCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHC
Confidence 99999999999999999999999999987 59999999999999999999887788999999999999
Q ss_pred cchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccC-CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEE
Q 000503 711 TLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG-SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRIL 789 (1459)
Q Consensus 711 ~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~-~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~ 789 (1459)
++++.++.+|+|.+|.+||+|.+||||||||++||||++++ |+|||||||||+||+++++.|.+. +.. ..+++|+|+
T Consensus 1423 ~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~-L~~-~~~~~TvI~ 1500 (1560)
T PTZ00243 1423 GLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQAT-VMS-AFSAYTVIT 1500 (1560)
T ss_pred CChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HCCCCEEEE
Confidence 99999999999999999999999999999999999999996 899999999999999999988776 443 457899999
Q ss_pred EcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhc-cccCc
Q 000503 790 CTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS-LYSGF 828 (1459)
Q Consensus 790 vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~ 828 (1459)
|+||++.+..||+|++|++|+|++.|+|+|++++ .+.+.
T Consensus 1501 IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~ 1540 (1560)
T PTZ00243 1501 IAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFH 1540 (1560)
T ss_pred EeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHH
Confidence 9999999999999999999999999999999864 34443
No 90
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.1e-56 Score=514.45 Aligned_cols=481 Identities=22% Similarity=0.271 Sum_probs=357.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHH-HHHHHH
Q 000503 945 LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFIL-NILLAN 1023 (1459)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l-~~~~~~ 1023 (1459)
...+.++..++..+|...+.+.+.+.-.+++..++...+++|..--...+..+.++ |++.+...+...- .-++..
T Consensus 69 al~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~Lr----DL~qvR~Fltg~g~~A~fDa 144 (580)
T COG4618 69 ALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPLR----DLDQVRQFLTGTGLTAFFDA 144 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccchh----hHHHHHHHHcCCCcchhcCC
Confidence 33455667788889999999999999999999999999888876555454555544 5555544332110 000000
Q ss_pred HHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHH
Q 000503 1024 FVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAK 1103 (1459)
Q Consensus 1024 ~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~ 1103 (1459)
-...+ .+.+++...||+.++.+.-.++...+...-....++--+...+....-..+..-+..+.++|+|.|......++
T Consensus 145 PW~P~-yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~r 223 (580)
T COG4618 145 PWMPL-YLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKR 223 (580)
T ss_pred chHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHH
Confidence 00111 12233445566655444433333222222222222222223333444456777889999999999998776666
Q ss_pred HHHHHHHH----HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 000503 1104 FKEHVVLY----QRTSYSELT---ASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLL 1176 (1459)
Q Consensus 1104 ~~~~~~~~----~~~~~~~~~---~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l 1176 (1459)
+.+....+ .++...... ..+-+-..+|.. +..+-+.+. ..+..++|.+...-........++
T Consensus 224 W~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~------iLg~GA~Lv-----i~ge~t~G~mIA~SIl~gRaLaPi 292 (580)
T COG4618 224 WGRFNAAYLSAQERASDRNGAFGALSRALRMALQSA------VLGLGAWLV-----IKGEITPGMMIAGSILSGRALAPI 292 (580)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH------HHhcceeeE-----EcCcCCcchhhHHHHHhhhhhccH
Confidence 65544433 333322211 112111111111 111111111 134567777666555566667788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEE
Q 000503 1177 GNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIV 1256 (1459)
Q Consensus 1177 ~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIv 1256 (1459)
...+..|.++-.+..|..|+.++++..++.... ...| ..+|.+.++++++.=++..+|+|+|+||+++|||-+||+
T Consensus 293 d~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~-m~LP---~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgII 368 (580)
T COG4618 293 DLAIANWKQFVAARQSYKRLNELLAELPAAAER-MPLP---APQGALSVERLTAAPPGQKKPILKGISFALQAGEALGII 368 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC-CCCC---CCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEE
Confidence 899999999999999999999999765543221 1111 137999999999966666678999999999999999999
Q ss_pred CCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCC-CCChHHHHHHHHH
Q 000503 1257 GRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEK 1335 (1459)
Q Consensus 1257 GrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~-~~~d~ei~~aL~~ 1335 (1459)
||||||||||.++|.|..+|.+|.|.+||-|+++.+.+++=++|||.|||-.||+|||.|||.-++ +.+++.|.+|.+.
T Consensus 369 GPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~l 448 (580)
T COG4618 369 GPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARL 448 (580)
T ss_pred CCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999997666 5677789999999
Q ss_pred hcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHh-cCCcEEEEe
Q 000503 1336 CHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSE-CKGMTVITI 1412 (1459)
Q Consensus 1336 ~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~-~~~~TvI~I 1412 (1459)
++.+|.|-.+ ||||.|||+|..|||||||||+||||+..+|++++||||-||||.+-|+.+.++|.+. .+++|+|+|
T Consensus 449 AgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvvi 528 (580)
T COG4618 449 AGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVI 528 (580)
T ss_pred cChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEE
Confidence 9999999999 9999999999999999999999999999999999999999999999999999998776 469999999
Q ss_pred ccChhhHhhcCEEEEEeCCeEEEecChhHHhcc
Q 000503 1413 AHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1413 aHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
|||.+.+..+|+|+||++|++..+|+-+|.+++
T Consensus 529 aHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 529 AHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred ecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999999999999999874
No 91
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.4e-56 Score=571.15 Aligned_cols=199 Identities=22% Similarity=0.332 Sum_probs=161.7
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
..++++||+++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ +.++
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 469999999999543 3599999999999999999999999999999999999999999999875 3479
Q ss_pred EEEeCCCcCCCccHHHhcC-c----CCCCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1301 AVVPQSPFLFEGSLRDNLD-P----FHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1301 ~~VpQdp~lf~gTIReNLd-p----~~~~~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
+|+||++. ...++.+|.. . +...+++++.++|+.. |++. ........||||||||++||||+++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~---------gl~~~~~~~~~~~LSgGqkqRvaLAraL~~ 644 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSF---------GVTGNLALQPMYTLSGGQKSRVAFAKITFK 644 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHC---------CCChHHhcCCccccCHHHHHHHHHHHHHhc
Confidence 99999973 2224444421 1 1122344444444444 5542 3345566899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEE-EecChhHHh
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-EQGNPQTLL 1443 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~Iv-E~G~p~eLl 1443 (1459)
+|++|||||||++||..+.+.+.+.+++. + .|||+|||+++.+.. ||||++|++|+++ ..|++++..
T Consensus 645 ~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 645 KPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 99999999999999999999998888764 4 499999999999986 8999999999998 568887753
No 92
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2.1e-55 Score=555.43 Aligned_cols=522 Identities=15% Similarity=0.107 Sum_probs=376.2
Q ss_pred HHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 273 ICC-AYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 351 (1459)
Q Consensus 273 l~~-~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r 351 (1459)
+++ .+++.++..+++.++..++....|.+++.+++..... .....+. +++..++..++.....+...+.+.++.
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (555)
T TIGR01194 11 LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFL-GQGSLFS----FGGLCLLALLFRIGADIFPAYAGMHII 85 (555)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cchHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566 7788888888899999999999999999887632111 1111111 112233344555566677788899999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHH
Q 000503 352 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYL-LYTQVKFAFVSGLAITIL 430 (1459)
Q Consensus 352 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~l-L~~~lg~a~l~~~~v~~~ 430 (1459)
..+...+|+|.++++...+.+.++|++++.++.|++.+......+..+....+.+++++.+ ++....++.+ .++++++
T Consensus 86 ~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li-~l~~~~~ 164 (555)
T TIGR01194 86 ANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAI-TISAIII 164 (555)
T ss_pred HHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHH
Confidence 9999999999999999988888999999999999999998765555555444444433333 3333222222 2222233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 431 LIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQ--IFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 508 (1459)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~--~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 508 (1459)
.+.+..+..++..+..++..+..++..+.+.|.+.|+++||.++.++ ...+++++..++..+...+..........+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (555)
T TIGR01194 165 GTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFG 244 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455566677777888888899999999999999999999854 3333443332222222111111111111111
Q ss_pred HHHHHHHH--HHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhc
Q 000503 509 ATTPTLFS--LFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 586 (1459)
Q Consensus 509 ~~~~~~~~--~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 586 (1459)
.....+.. .+.++. ..+.++.+.+++++.+...+..|+..+...++.+.++.+|.+||.++++.++.++......
T Consensus 245 ~~~~~~~~~~~~~~~~---~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~ 321 (555)
T TIGR01194 245 QLLFFLLIGCALFAAA---MFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELS 321 (555)
T ss_pred HHHHHHHHHHHHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Confidence 11111111 111111 1257999999999999999999999999999999999999999999986422111000000
Q ss_pred CCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCe
Q 000503 587 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 666 (1459)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G 666 (1459)
.... ............++++|++|+|+..+. ..+++|+|+||++++|++++|+||||||||||+++|+|+++|++|
T Consensus 322 ~~~~---~~~~~~~~~~~~i~~~~v~f~y~~~~~-~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G 397 (555)
T TIGR01194 322 DADN---VLLLAHDKSVDSIELKDVHMNPKAPEG-SEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEG 397 (555)
T ss_pred cccc---ccccccCCCCceEEEEEEEEEeCCCCC-CcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCc
Confidence 0000 000000012356999999999974211 113469999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcc
Q 000503 667 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1459)
Q Consensus 667 ~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~ 733 (1459)
+|.++| .++||+|+|++|++|+++|+ ..+.++++..++++.++++++++.+|+|++|. .+
T Consensus 398 ~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~ 470 (555)
T TIGR01194 398 EILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TA 470 (555)
T ss_pred EEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----cc
Confidence 999986 48999999999999999996 33456778889999999999999999999984 78
Q ss_pred cCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEE
Q 000503 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKW 813 (1459)
Q Consensus 734 LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~ 813 (1459)
||||||||++||||++++|+|+|||||||+||+++++.+.+.++.....+++|+|+||||++.+..||+|++|++|++++
T Consensus 471 LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~ 550 (555)
T TIGR01194 471 LSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVK 550 (555)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999887643221235799999999999999999999999999986
Q ss_pred e
Q 000503 814 I 814 (1459)
Q Consensus 814 ~ 814 (1459)
.
T Consensus 551 ~ 551 (555)
T TIGR01194 551 D 551 (555)
T ss_pred e
Confidence 3
No 93
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-57 Score=511.82 Aligned_cols=521 Identities=22% Similarity=0.287 Sum_probs=384.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCC-chHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 286 LLKVVNDSIGFAGPLLLNKLIKFLQQGSG-HLDGYVLAIALGLTSI---LKSFFDTQYSFHLSKLKLKLRSSIMTIIYQK 361 (1459)
Q Consensus 286 ~~~l~~~~~~~~~P~ll~~li~~~~~~~~-~~~g~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K 361 (1459)
++.++.-++...-|.+.+.+++.+..+.. .+......+.+.+++- +..++.+...+...++..-....+...+|+|
T Consensus 222 ~ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrH 301 (790)
T KOG0056|consen 222 FLLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRH 301 (790)
T ss_pred HHHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHH
Confidence 34445556677789999999988864211 1111122222333221 2355666666666666666677788899999
Q ss_pred HhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH---HHHHHH
Q 000503 362 CLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLI---PVNKWI 438 (1459)
Q Consensus 362 ~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v~~~~~---~~~~~~ 438 (1459)
...++....-.+.+|+++..|...+..+.-.-..+..+-...+.+++++ .|..+..-...|+++++.+. .+...+
T Consensus 302 lh~LSlrwHL~rrtGeVLrvmdrGtssvtll~yvVF~i~PtllDl~va~--vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~i 379 (790)
T KOG0056|consen 302 LHNLSLRWHLNRRTGEVLRVMDRGTSSVTLLEYVVFQIGPTLLDLGVAM--VYFFIKFNIWFGLIVFLMMLLYCYVTIKI 379 (790)
T ss_pred HHhhceeeeecccccceeehhccCcchhhHHHHHHhhcccHHHHhhhhh--hhhhhhHhHHHHHHHHHHHHHHhheeeee
Confidence 9999988776778899999997766666522223333333444455444 34444444444544433322 222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 439 ANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLM----KTRSSEVKHLSTRKYLDAWCVFFWATTPTL 514 (1459)
Q Consensus 439 ~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~----~~R~~El~~~~~~~~~~~~~~~~~~~~~~~ 514 (1459)
...-.++++++...-.+--..-.+.+-|-.+||.|+.|+...++.. +..++|-+.+.....+......+... .+
T Consensus 380 TeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~l--gl 457 (790)
T KOG0056|consen 380 TEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGL--GL 457 (790)
T ss_pred ehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh--HH
Confidence 3444556666655555555666788889999999999887665543 33444444433333332222221111 11
Q ss_pred HHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccC
Q 000503 515 FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISN 594 (1459)
Q Consensus 515 ~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~ 594 (1459)
....-+.+|.+..+.+++|...-+..++-.+..|++.+......++...+-++|+.+.++.++...+.. ..++
T Consensus 458 l~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P---~a~p---- 530 (790)
T KOG0056|consen 458 LAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP---GAPP---- 530 (790)
T ss_pred hhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC---CCCC----
Confidence 222234567777889999998888889999999999999999999999999999999996543221111 1111
Q ss_pred CCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--
Q 000503 595 GLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-- 672 (1459)
Q Consensus 595 ~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-- 672 (1459)
.....+.|+++|++|+|+++ +++|+||||+++||+.+++|||+|+||||++++|.+.++..+|+|.++|
T Consensus 531 ----l~~~~G~i~fsnvtF~Y~p~-----k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqd 601 (790)
T KOG0056|consen 531 ----LKVTQGKIEFSNVTFAYDPG-----KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQD 601 (790)
T ss_pred ----ccccCCeEEEEEeEEecCCC-----CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCch
Confidence 12355789999999999754 4459999999999999999999999999999999999999999999998
Q ss_pred -----------cEEEEcCCCCCCCCCHHHHhccCCCC-CHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHH
Q 000503 673 -----------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1459)
Q Consensus 673 -----------~i~y~~Q~~~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkq 740 (1459)
+||.||||..|||.||..||.++++- ..|...++.+|++.++.|..+|+|++|.|||+|-.||||+||
T Consensus 602 Irnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQ 681 (790)
T KOG0056|consen 602 IRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQ 681 (790)
T ss_pred HHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchh
Confidence 59999999999999999999999863 445666788999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHH
Q 000503 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 741 RvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l 820 (1459)
|||+||++.++|.|++|||+|||||.++++.|-.. +.. +..++|.|+|.||++.+-+||.|+++++|+|+|.|+|+|+
T Consensus 682 RVAiARtiLK~P~iIlLDEATSALDT~tER~IQaa-L~r-lca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeL 759 (790)
T KOG0056|consen 682 RVAIARTILKAPSIILLDEATSALDTNTERAIQAA-LAR-LCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEEL 759 (790)
T ss_pred hHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHH-HHH-HhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHH
Confidence 99999999999999999999999999999988654 433 6789999999999999999999999999999999999999
Q ss_pred Hhc-cccCc
Q 000503 821 AVS-LYSGF 828 (1459)
Q Consensus 821 ~~~-~~~~~ 828 (1459)
... ++.+.
T Consensus 760 l~rdgG~Ya 768 (790)
T KOG0056|consen 760 LKRDGGAYA 768 (790)
T ss_pred HhccCCcHH
Confidence 876 44443
No 94
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=7.1e-56 Score=540.08 Aligned_cols=484 Identities=23% Similarity=0.308 Sum_probs=336.6
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--cEEEEcCCCC
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPW 682 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~~~ 682 (1459)
.+.++|++.++.. +++++|+||++.+|+.++|||+|||||||||++|.|+..|++|+|...+ ++||++|+|.
T Consensus 3 ~i~~~~ls~~~g~------~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~ 76 (530)
T COG0488 3 MITLENLSLAYGD------RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPP 76 (530)
T ss_pred eEEEeeeEEeeCC------ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCC
Confidence 4678899998842 3459999999999999999999999999999999999999999999986 7999999999
Q ss_pred CCCC-CHHHHhccCCCC-C--HHHHHHHH---------------------HHhcchhhHhhccCC--CcccccCCCcccC
Q 000503 683 ILSG-TIRDNILFGKNY-D--PQSYSETL---------------------KACTLDVDISLMVGG--DMAYIGEKGVNLS 735 (1459)
Q Consensus 683 l~~~-ti~~nI~~g~~~-~--~~~~~~v~---------------------~~~~l~~di~~~~~g--d~t~ig~~g~~LS 735 (1459)
.... ||+|.+.-+... . ..+|+++. ....++.+++..-.| .... ...-.+||
T Consensus 77 ~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~LS 155 (530)
T COG0488 77 LDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSSLS 155 (530)
T ss_pred cCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhhcC
Confidence 9865 999999876421 0 01111111 111222233322222 1111 34557899
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEE-E
Q 000503 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK-W 813 (1459)
Q Consensus 736 GGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~-~ 813 (1459)
||||.||+|||||..+||+|||||||++||..+..|+-+.+ . ..+| |+|+|||+.++|.. |++|+.+++|++. +
T Consensus 156 GG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L-~--~~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y 231 (530)
T COG0488 156 GGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYL-K--RYPG-TVIVVSHDRYFLDNVATHILELDRGKLTPY 231 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHH-H--hCCC-cEEEEeCCHHHHHHHhhheEEecCCceeEe
Confidence 99999999999999999999999999999999999998873 2 2345 99999999999997 9999999999765 6
Q ss_pred ecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHHHH
Q 000503 814 IGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYA 893 (1459)
Q Consensus 814 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~ 893 (1459)
.|+|+...+..... . . .+ .. ..+..+++.++
T Consensus 232 ~Gny~~~~~~r~~~----------~---~-----------~~----~~--------~~~~~~~~~~~------------- 262 (530)
T COG0488 232 KGNYSSYLEQKAER----------L---R-----------QE----AA--------AYEKQQKELAK------------- 262 (530)
T ss_pred cCCHHHHHHHHHHH----------H---H-----------HH----HH--------HHHHHHHHHHH-------------
Confidence 67777664321000 0 0 00 00 00000000000
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 894 KFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVK 973 (1459)
Q Consensus 894 ~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1459)
+..|+.
T Consensus 263 ----------------------------~~~~i~---------------------------------------------- 268 (530)
T COG0488 263 ----------------------------EQEWIR---------------------------------------------- 268 (530)
T ss_pred ----------------------------HHHHHH----------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000503 974 VHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYS 1053 (1459)
Q Consensus 974 lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~ 1053 (1459)
|+.
T Consensus 269 ---------------------------r~~-------------------------------------------------- 271 (530)
T COG0488 269 ---------------------------RGK-------------------------------------------------- 271 (530)
T ss_pred ---------------------------HHH--------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1054 KLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLA 1133 (1459)
Q Consensus 1054 ~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~ 1133 (1459)
...+++++.
T Consensus 272 ----~~~~~~k~a------------------------------------------------------------------- 280 (530)
T COG0488 272 ----AAASKAKKA------------------------------------------------------------------- 280 (530)
T ss_pred ----hccchHHHH-------------------------------------------------------------------
Confidence 000000000
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hcCCccccc-c-
Q 000503 1134 AFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY--MDVPQEELC-G- 1209 (1459)
Q Consensus 1134 ~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~--~~~~~e~~~-~- 1209 (1459)
+......+++.+- ...|.+... .
T Consensus 281 -----------------------------------------------------~sr~k~l~k~~~~~~~~~~~~~~~~~~ 307 (530)
T COG0488 281 -----------------------------------------------------KSRIKRLEKLEARLAEERPVEEGKPLA 307 (530)
T ss_pred -----------------------------------------------------HHHHHHHHHHHhhhhhcccccccccce
Confidence 0000011111100 000000000 0
Q ss_pred -CCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeC
Q 000503 1210 -YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNI 1288 (1459)
Q Consensus 1210 -~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di 1288 (1459)
...+++.-..+-.++++|+++.|.++ .++++++||.|++|++|||+||||+|||||+++|.|-..|.+|+|.+.-
T Consensus 308 ~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~--- 383 (530)
T COG0488 308 FRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE--- 383 (530)
T ss_pred eeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC---
Confidence 00011101224469999999999765 5799999999999999999999999999999999999999999998753
Q ss_pred CCCChHHHhcccEEEeCCC-cCCC-ccHHHhcCcCCCC-ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000503 1289 INTPVRDLRGRFAVVPQSP-FLFE-GSLRDNLDPFHMN-DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1459)
Q Consensus 1289 ~~i~~~~lR~~i~~VpQdp-~lf~-gTIReNLdp~~~~-~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQr 1365 (1459)
.-++||.+|+- .+++ .|+-|++....+. .+.++...|.+.++... .+......||||||-|
T Consensus 384 --------~v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~--------~~~~~v~~LSGGEk~R 447 (530)
T COG0488 384 --------TVKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGE--------DQEKPVGVLSGGEKAR 447 (530)
T ss_pred --------ceEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChH--------HHhCchhhcCHhHHHH
Confidence 12699999998 3343 3788888654422 35666666666554321 1223334699999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEe-cChhHHh
Q 000503 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQ-GNPQTLL 1443 (1459)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~-G~p~eLl 1443 (1459)
+.||+.++.+|++|||||||.+||.+|.+.+.++|.++ + -|||+|||+.+.+.. |++|+++++ ++.++ |++++..
T Consensus 448 l~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f-~-Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~ 524 (530)
T COG0488 448 LLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF-E-GTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYL 524 (530)
T ss_pred HHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC-C-CeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHH
Confidence 99999999999999999999999999999999999764 4 499999999999987 799999999 88887 8998887
Q ss_pred ccC
Q 000503 1444 QDE 1446 (1459)
Q Consensus 1444 ~~~ 1446 (1459)
+..
T Consensus 525 ~~~ 527 (530)
T COG0488 525 EQK 527 (530)
T ss_pred Hhh
Confidence 643
No 95
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=4.2e-56 Score=557.98 Aligned_cols=191 Identities=21% Similarity=0.307 Sum_probs=161.1
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.++++|++++|++ ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 4899999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEeCCCcC-CCccHHHhcCcCC-CCC-hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1302 VVPQSPFL-FEGSLRDNLDPFH-MND-DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1302 ~VpQdp~l-f~gTIReNLdp~~-~~~-d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
|+||++.+ ++.|+++|+.... ... +... .+.++.+|++.........||||||||++|||||+++|+|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~---------~~~L~~l~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p~l 474 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYK---------SEIIKPLQLERLLDKNVKDLSGGELQRVAIAACLSRDADL 474 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHH---------HHHHHHCCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999875 4569999986431 111 1122 3344445666555666678999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecC
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1438 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~ 1438 (1459)
|||||||++||.++...+.+.|++.. .++|+|+|+|+++.+.. ||||++|++ ++...|+
T Consensus 475 lLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 475 YLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 99999999999999999999998864 37899999999999876 899999964 8877766
No 96
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2.7e-54 Score=552.08 Aligned_cols=513 Identities=15% Similarity=0.124 Sum_probs=386.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 900 ITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYST----SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVH 975 (1459)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~----~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh 975 (1459)
.+++.+++.++...+....+++.+...+.....+ .... ..++.+++++.++..+..++..++......+...++|
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~-~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~ 175 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRS-PRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLY 175 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445556666666667777776665421111 1111 1223333444445555555555666667777888888
Q ss_pred HHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHH-HHHHHHHHHHHHHHHHHH
Q 000503 976 NTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSY-VQVFFLLLLVPFWFIYSK 1054 (1459)
Q Consensus 976 ~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~pl~~~~~~ 1054 (1459)
++.+++....++.|||. ++|++.+|+++|++.+.+.+...+..++..++.+++..+.+.. .+|.+.++++...++...
T Consensus 176 ~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~ 254 (659)
T TIGR00954 176 SKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGV 254 (659)
T ss_pred HHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 88888888888899987 7899999999999999999988888888888888776666554 566555555444445555
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1055 LQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAA 1134 (1459)
Q Consensus 1055 ~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~ 1134 (1459)
+.+++.+..+++.+......+.+.+.+.|.++|+++||+|+.|+.+.+++.+..++..+..........++....+++..
T Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 334 (659)
T TIGR00954 255 VLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAK 334 (659)
T ss_pred HHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 55666666666666666777788899999999999999999999999999999998888888877777777766666543
Q ss_pred HH---HHHHHH-HHHHhhcCCCCCCCchHHH-HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 000503 1135 FI---ISFIAT-MAVIGSRGNLPATFSTPGL-VGLALSY---AAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1206 (1459)
Q Consensus 1135 ~~---~~~~~~-~~v~~~~~~~~~~~~~~g~-vgl~l~~---~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~ 1206 (1459)
.. +..+.. ..++...+ ...+..+.|. ++..+.| +..+..++..+...+.++....++.+|+.++.+.++|.
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~-~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~ 413 (659)
T TIGR00954 335 YTWSAVGLVAVSIPIFDKTH-PAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDV 413 (659)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 111111 11111110 0012334443 3323333 55668888999999999999999999999999764432
Q ss_pred cc--------cC-CC-------C------CCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHH
Q 000503 1207 LC--------GY-QS-------L------SPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKS 1264 (1459)
Q Consensus 1207 ~~--------~~-~~-------~------~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKS 1264 (1459)
.. .. .. . .......+.|+++||+++|+++ +++|+|+||+|++||++||+||||||||
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKS 492 (659)
T TIGR00954 414 KSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKS 492 (659)
T ss_pred hcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHH
Confidence 10 00 00 0 0001134679999999999643 4699999999999999999999999999
Q ss_pred HHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCC--------CCChHHHHHHHHHh
Q 000503 1265 SILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH--------MNDDLKIWSVLEKC 1336 (1459)
Q Consensus 1265 TLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~--------~~~d~ei~~aL~~~ 1336 (1459)
||+++|.|+++|++|+|.+|+ |+++++|||+|.+|++|+|||+.... ..++++++++++.+
T Consensus 493 TLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~ 561 (659)
T TIGR00954 493 SLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNV 561 (659)
T ss_pred HHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHc
Confidence 999999999999999999874 67899999999999999999997532 24678899999999
Q ss_pred cHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccC
Q 000503 1337 HVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHR 1415 (1459)
Q Consensus 1337 ~l~~~i~~l-GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHr 1415 (1459)
++.+.++.- |+|+..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+++.+++. ++|+|+||||
T Consensus 562 ~l~~~~~~~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~ 638 (659)
T TIGR00954 562 QLTHILEREGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHR 638 (659)
T ss_pred CCHHHHhhcCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCc
Confidence 999988766 9999876 46699999999999999999999999999999999999999999999874 8999999999
Q ss_pred hhhHhhcCEEEEEeC
Q 000503 1416 ISTVLNMDEILILDH 1430 (1459)
Q Consensus 1416 l~ti~~~DrIlVl~~ 1430 (1459)
++++..||+|++|+.
T Consensus 639 ~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 639 KSLWKYHEYLLYMDG 653 (659)
T ss_pred hHHHHhCCEEEEEeC
Confidence 999999999999973
No 97
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.7e-53 Score=582.53 Aligned_cols=539 Identities=17% Similarity=0.242 Sum_probs=386.3
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCC--cchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 887 TVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTK--YSTSFYLVVLCIFCMFNSFLTLVRAFSFA 964 (1459)
Q Consensus 887 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~--~~~~~~l~~~~~l~~~~~~~~~~~~~~~~ 964 (1459)
+..+..++..+|..+... +..++..++...+++.+....+........ .....|++.++++.++..++.....+...
T Consensus 69 ~L~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~ 147 (1490)
T TIGR01271 69 KLLNALRRCFFWRFVFYG-ILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLH 147 (1490)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555544433 234455566667777776655442111111 11223344444445555556555666666
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHH
Q 000503 965 FGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLL 1044 (1459)
Q Consensus 965 ~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1044 (1459)
..+.+....+...+++++++.+...+++.++|+++|++++|++.++..+..... +....+.+++.++++.....+..++
T Consensus 148 ~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~-~~~~pi~i~~~~~lL~~~~G~~~l~ 226 (1490)
T TIGR01271 148 HLGMQMRIALFSLIYKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHF-VWIAPLQVILLMGLIWELLEVNGFC 226 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777788888888889999999999999999999999999999999987665433 3233333333344443333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1045 LVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLW 1124 (1459)
Q Consensus 1045 ~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w 1124 (1459)
.+.+++++..++.+..+.....++..........+...|.++|+++||.|+||+.|.+++.+..+...+..........|
T Consensus 227 ~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~ 306 (1490)
T TIGR01271 227 GLGFLILLALFQACLGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYF 306 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444444444555555556667778999999999999999999999988887666554444333322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 000503 1125 LSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLL-GNFLSSFTETEKEMVSLERVLEYMDVP 1203 (1459)
Q Consensus 1125 l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l-~~l~~~~~~~e~~~~s~~Ri~~~~~~~ 1203 (1459)
..... .....++.++.+. .+... +..+++.+..++++...+..++ ..+...+..+.++.+|++||.+|++.+
T Consensus 307 ~~~~~-~~~~~~~~~~~f~-~y~~~-----~~~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~ 379 (1490)
T TIGR01271 307 YSSAF-FFSGFFVVFLSVV-PYALI-----KGIILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKE 379 (1490)
T ss_pred HHHHH-HHHHHHHHHHHHH-HHHHh-----CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 21111 1111111111111 11111 1123555555566665555554 457777888888999999999999765
Q ss_pred ccccccCCCCCCCCCCCccEEEEEEEEEecCC--------------------------------CCccceeeeEEEeCCc
Q 000503 1204 QEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS--------------------------------LPAALHDINFTIEGGT 1251 (1459)
Q Consensus 1204 ~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~--------------------------------~~~vL~~isl~I~~Ge 1251 (1459)
+.+.... . +....|+++|++|.|+.. .+++|+|+||+|++||
T Consensus 380 e~~~~~~-----~-~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~ 453 (1490)
T TIGR01271 380 EYKTLEY-----N-LTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQ 453 (1490)
T ss_pred ccccccc-----c-CCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCC
Confidence 4321110 0 112358888888888421 1358999999999999
Q ss_pred EEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCCCChHHHHH
Q 000503 1252 QVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWS 1331 (1459)
Q Consensus 1252 kvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~ 1331 (1459)
+++|+||+|||||||+++|+|+++|++|+|.+|| +++||||+|++|++||||||.++..+++++..+
T Consensus 454 ~~~I~G~~GsGKSTLl~~l~G~~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~ 520 (1490)
T TIGR01271 454 LLAVAGSTGSGKSSLLMMIMGELEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTS 520 (1490)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccccchHHHHH
Confidence 9999999999999999999999999999999998 599999999999999999998776666677888
Q ss_pred HHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHH-HHHHhcCCcE
Q 000503 1332 VLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQN-AISSECKGMT 1408 (1459)
Q Consensus 1332 aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~-~I~~~~~~~T 1408 (1459)
+++.|++.+.++.+ |.+|.+|++|.+||||||||++||||++++|+|+|||||||+||+++++.+.+ ++++..+++|
T Consensus 521 ~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~t 600 (1490)
T TIGR01271 521 VIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKT 600 (1490)
T ss_pred HHHHHhHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCe
Confidence 99999999999988 89999999999999999999999999999999999999999999999999987 5677778999
Q ss_pred EEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000503 1409 VITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1454 (1459)
Q Consensus 1409 vI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1454 (1459)
+|+|||+++.+..||+|++|++|++++.|+|+++.+.. +.|.+.+
T Consensus 601 vilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~~~~-~~~~~~~ 645 (1490)
T TIGR01271 601 RILVTSKLEHLKKADKILLLHEGVCYFYGTFSELQAKR-PDFSSLL 645 (1490)
T ss_pred EEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHHHhcC-hHHHHHH
Confidence 99999999999999999999999999999999998753 4566655
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=6.8e-53 Score=532.75 Aligned_cols=508 Identities=17% Similarity=0.155 Sum_probs=363.2
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAG-PLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 347 (1459)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 347 (1459)
+++.+++.+++.++...++.++..++.+.. |++.+.++|.+.. .......+++.+++. .++.....+...+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADT--SLLVLPEFLGLLLLL----MAVTLGSQLALTTLG 76 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cchHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 566778888888888888889888888874 7788888886532 111111111111111 223344556667778
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000503 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 427 (1459)
Q Consensus 348 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v 427 (1459)
.++...+...+|+|.++++...+++.++|++++.++.|++.+......+..++...+.+++++++++..-...+++.+++
T Consensus 77 ~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 156 (547)
T PRK10522 77 HHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAIW 156 (547)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 88888899999999999999988888999999999999999987655666777777776666655544333333444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 428 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYG--WEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 505 (1459)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g--~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 505 (1459)
+++...+..++.++..+..++.++..++..+.+.|.++|++++++.+ .++.+.++..+..++-.+...+.........
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (547)
T PRK10522 157 MAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAV 236 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 44445566777888888888999999999999999999999997433 2234444444433222222112221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC---CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhh
Q 000503 506 FFWATTPTLFSLFTFGLFALMGH---QLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHEL 582 (1459)
Q Consensus 506 ~~~~~~~~~~~~~~f~~~~~~~~---~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~ 582 (1459)
.+.. +...+.++.+.+.++ ..+.+.+.+...+...+..|+..+...++.+.++..+++||.+++..++..+..
T Consensus 237 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~ 312 (547)
T PRK10522 237 NWSN----IMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFP 312 (547)
T ss_pred HHHH----HHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 1111 111111222222221 122222222222333467899999999999999999999999998544321100
Q ss_pred hhhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc
Q 000503 583 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 662 (1459)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~ 662 (1459)
. .+. .+....++++|++|+|+.+ . ++|+|+||++++|+.++|+||||||||||+++|+|+++
T Consensus 313 -~---~~~---------~~~~~~i~~~~v~f~y~~~--~---~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~ 374 (547)
T PRK10522 313 -R---PQA---------FPDWQTLELRNVTFAYQDN--G---FSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQ 374 (547)
T ss_pred -c---ccc---------cCcCceEEEEEEEEEeCCC--C---eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 0 000 0112469999999999732 2 35999999999999999999999999999999999999
Q ss_pred CCCeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccC
Q 000503 663 LTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGE 729 (1459)
Q Consensus 663 ~~~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~ 729 (1459)
|++|+|.++| .++|++|+|++|++|++|| +...+++..+++++.+++..++.. ++|. .
T Consensus 375 ~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~ 445 (547)
T PRK10522 375 PQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----I 445 (547)
T ss_pred CCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----C
Confidence 9999999876 5999999999999999999 455677788888888888776652 3331 2
Q ss_pred CCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhcCCEEEEEeC
Q 000503 730 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDK 808 (1459)
Q Consensus 730 ~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~~~d~i~~l~~ 808 (1459)
+|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+ .... .+++|+|+|||+++.+..||+|++|++
T Consensus 446 ~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l-~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 524 (547)
T PRK10522 446 SNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVL-LPLLQEMGKTIFAISHDDHYFIHADRLLEMRN 524 (547)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHH-HHHHHhCCCEEEEEEechHHHHhCCEEEEEEC
Confidence 48899999999999999999999999999999999999999888763 2212 247899999999999999999999999
Q ss_pred CeEEEe
Q 000503 809 GQVKWI 814 (1459)
Q Consensus 809 G~i~~~ 814 (1459)
|++++.
T Consensus 525 G~i~e~ 530 (547)
T PRK10522 525 GQLSEL 530 (547)
T ss_pred CEEEEe
Confidence 999875
No 99
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-53 Score=503.56 Aligned_cols=442 Identities=25% Similarity=0.349 Sum_probs=333.8
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|.+=+|+. .++|+|+||++.+||+++++|.||+|||||+|.|.|.++|++|+|.++|
T Consensus 7 ~ll~~~~i~K~Fgg------V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A 80 (500)
T COG1129 7 PLLELRGISKSFGG------VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDA 80 (500)
T ss_pred ceeeeecceEEcCC------ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHH
Confidence 45778898888763 2459999999999999999999999999999999999999999999987
Q ss_pred ---cEEEEcCCCCCCC-CCHHHHhccCCCC-------CHHHH----HHHHHHhcchhhHhhccCCCcccccCCCcccCcH
Q 000503 673 ---SIAYVPQVPWILS-GTIRDNILFGKNY-------DPQSY----SETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~-~ti~~nI~~g~~~-------~~~~~----~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 737 (1459)
.|+.|.|++-|+. -||.|||.+|++. |..+. +++++..++..| ......+||+|
T Consensus 81 ~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~-----------~~~~v~~Lsia 149 (500)
T COG1129 81 LAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID-----------PDTLVGDLSIA 149 (500)
T ss_pred HhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC-----------hhhhhhhCCHH
Confidence 4999999999875 5999999888653 32322 223333332211 23344589999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecC
Q 000503 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1459)
Q Consensus 738 QkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~ 816 (1459)
|||-|+||||++.+++|+|||||||+|+.+..+++|+. +.....+|.++|+|||+++.+.. ||+|.||+||+.+..++
T Consensus 150 qrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~-ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 150 QRQMVEIARALSFDARVLILDEPTAALTVKETERLFDL-IRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecc
Confidence 99999999999999999999999999999999999986 44435678999999999998765 99999999999875432
Q ss_pred H-HHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHHHHhh
Q 000503 817 S-ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKF 895 (1459)
Q Consensus 817 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~ 895 (1459)
. .++ +.++. +.
T Consensus 229 ~~~~~------------------------------------------------~~~~l----------v~---------- 240 (500)
T COG1129 229 TAAET------------------------------------------------SEDEL----------VR---------- 240 (500)
T ss_pred cccCC------------------------------------------------CHHHH----------HH----------
Confidence 1 100 00000 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 896 SGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVH 975 (1459)
Q Consensus 896 ~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh 975 (1459)
++
T Consensus 241 -----------------------------~M------------------------------------------------- 242 (500)
T COG1129 241 -----------------------------LM------------------------------------------------- 242 (500)
T ss_pred -----------------------------Hh-------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 976 NTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKL 1055 (1459)
Q Consensus 976 ~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~ 1055 (1459)
.|
T Consensus 243 -------------------vG----------------------------------------------------------- 244 (500)
T COG1129 243 -------------------VG----------------------------------------------------------- 244 (500)
T ss_pred -------------------hC-----------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1056 QFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAF 1135 (1459)
Q Consensus 1056 ~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~ 1135 (1459)
|++
T Consensus 245 --------r~~--------------------------------------------------------------------- 247 (500)
T COG1129 245 --------REL--------------------------------------------------------------------- 247 (500)
T ss_pred --------cch---------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCC
Q 000503 1136 IISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSP 1215 (1459)
Q Consensus 1136 ~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~ 1215 (1459)
.+..++. +.
T Consensus 248 ----------------------------------------------------------------~~~~~~~-------~~ 256 (500)
T COG1129 248 ----------------------------------------------------------------EDLFPEP-------PE 256 (500)
T ss_pred ----------------------------------------------------------------hhhcccc-------cc
Confidence 0000000 00
Q ss_pred CCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCC-hH
Q 000503 1216 DWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VR 1294 (1459)
Q Consensus 1216 ~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~ 1294 (1459)
.-+..-.++++|++.. ..++|+||++++||.+||.|--|||+|-++.+|+|..++.+|+|.+||.++.--+ .+
T Consensus 257 ~~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~ 330 (500)
T COG1129 257 EGIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRD 330 (500)
T ss_pred cCCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHH
Confidence 0001123667777642 2588999999999999999999999999999999999999999999999887654 55
Q ss_pred HHhcccEEEeCCCc---CC-CccHHHhcCcCC--CCChH-HHHHHHHHhcHHHHHHhCCCchh-hhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPF---LF-EGSLRDNLDPFH--MNDDL-KIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~---lf-~gTIReNLdp~~--~~~d~-ei~~aL~~~~l~~~i~~lGLdt~-v~e~G~~LSgGQrQrl 1366 (1459)
..+..|+|||-|-- +| ..+|++|+.... .+... -+...-++.-..+.++.++..+. ....-.+||||.+|++
T Consensus 331 Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~~LSGGNQQKV 410 (500)
T COG1129 331 AIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPIGTLSGGNQQKV 410 (500)
T ss_pred HHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchhhcCCchhhhhH
Confidence 88889999999874 44 559999996431 11100 23334444455666776633332 1122337999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEecChhH
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQT 1441 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~e 1441 (1459)
+|||.|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+|+-.++++. -||||+||.+|+++..=+.++
T Consensus 411 vlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~~ 487 (500)
T COG1129 411 VLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGELDREE 487 (500)
T ss_pred HHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEecccc
Confidence 99999999999999999999999999999999999875 5899999999999988 599999999999987544443
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.2e-50 Score=514.67 Aligned_cols=516 Identities=16% Similarity=0.171 Sum_probs=376.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 280 PYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 359 (1459)
Q Consensus 280 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy 359 (1459)
.++..+++.++.+++....|++.+.+++.+.+.+.... ...++.++++.++.+++.....|...++..++|..+...++
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f-~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~ 175 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNF-AWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLY 175 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777888889999999999999998764322111 10111122223333344444444555566666666666666
Q ss_pred HHHhcC----CccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHH
Q 000503 360 QKCLYV----RLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAF-VSGLAITILLIP 433 (1459)
Q Consensus 360 ~K~L~l----~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~-l~~~~v~~~~~~ 433 (1459)
++.++. +...+++ ..|++.+.+++|++.+.+... .+..+...++.++.+++.++..+++.. ++.++.+++...
T Consensus 176 ~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~ 254 (659)
T TIGR00954 176 SKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGV 254 (659)
T ss_pred HHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 665543 3333333 579999999999999987554 466666777777777777776566643 333344455556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000503 434 VNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP- 512 (1459)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~- 512 (1459)
+..++.+++.+..++..+..++-.+..+|.++|+++||+|+.|+...+++++.-++-.+...+.....+....+.....
T Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 334 (659)
T TIGR00954 255 VLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAK 334 (659)
T ss_pred HHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 6777888889999999999999999999999999999999999998888877666666666665555554444332222
Q ss_pred ---HHHHHHHHHHHHHh-C----CCCCHhHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCch
Q 000503 513 ---TLFSLFTFGLFALM-G----HQLDAAMVFT-C---LALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH 580 (1459)
Q Consensus 513 ---~~~~~~~f~~~~~~-~----~~Lt~~~~ft-~---l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~ 580 (1459)
..+..+..+...+. . +.+|.+..+. . ..++..+..|+..+...+..+.++.++.+||.++++.++..+
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~ 414 (659)
T TIGR00954 335 YTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVK 414 (659)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12222223332222 2 5788887554 2 334677799999999999999999999999999996432110
Q ss_pred hhh-hhcCCCC-----------cccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCC
Q 000503 581 ELE-QAANSPS-----------YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGS 648 (1459)
Q Consensus 581 ~~~-~~~~~~~-----------~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~Gs 648 (1459)
... .....+. ....+..........++++|++|.|+.+ +++|+|+||++++||.++|+|||||
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-----~~il~~isl~i~~Ge~~~IvG~nGs 489 (659)
T TIGR00954 415 SGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-----DVLIESLSFEVPSGNHLLICGPNGC 489 (659)
T ss_pred cccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-----CeeeecceEEECCCCEEEEECCCCC
Confidence 000 0000000 0000000011123469999999988632 2359999999999999999999999
Q ss_pred cHHHHHHHHhcCccCCCeEEEEcC--cEEEEcCCCCCCCCCHHHHhccCC--------CCCHHHHHHHHHHhcchhhHhh
Q 000503 649 GKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWILSGTIRDNILFGK--------NYDPQSYSETLKACTLDVDISL 718 (1459)
Q Consensus 649 GKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~~~l~~~ti~~nI~~g~--------~~~~~~~~~v~~~~~l~~di~~ 718 (1459)
|||||+++|+|+++|++|+|.+++ .++||+|+|+++++|++|||.++. ..++++..++++.+++++.++.
T Consensus 490 GKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~ 569 (659)
T TIGR00954 490 GKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER 569 (659)
T ss_pred CHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh
Confidence 999999999999999999998864 699999999999999999999874 2455677889999999887776
Q ss_pred ccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh
Q 000503 719 MVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS 798 (1459)
Q Consensus 719 ~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~ 798 (1459)
|.|++|..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+.+.+ .. .++|+|++||+++.++
T Consensus 570 -~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l-~~---~~~tvI~isH~~~~~~ 643 (659)
T TIGR00954 570 -EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLC-RE---FGITLFSVSHRKSLWK 643 (659)
T ss_pred -cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHH-HH---cCCEEEEEeCchHHHH
Confidence 999999876 56799999999999999999999999999999999999999988763 22 3789999999999999
Q ss_pred cCCEEEEEeC
Q 000503 799 AADMVVVMDK 808 (1459)
Q Consensus 799 ~~d~i~~l~~ 808 (1459)
.||+|++|+.
T Consensus 644 ~~d~il~l~~ 653 (659)
T TIGR00954 644 YHEYLLYMDG 653 (659)
T ss_pred hCCEEEEEeC
Confidence 9999999973
No 101
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-51 Score=458.64 Aligned_cols=466 Identities=20% Similarity=0.253 Sum_probs=356.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000503 347 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 425 (1459)
Q Consensus 347 ~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~ 425 (1459)
+......+.-..|.|++.|+.....+..+|.+..-+.--..-|....++ +..+....++++++..++++..||......
T Consensus 10 ~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t 89 (497)
T COG5265 10 GQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTT 89 (497)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHH
Confidence 3334445666788999999887766666776655554444455554433 344555678899999999999998776655
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 426 AITILLIPVNKWIA-NLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1459)
Q Consensus 426 ~v~~~~~~~~~~~~-~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1459)
++.+++..+-.+.. ..-...+++..++-.+......+.|-+-.++|.||-|+.+..+.....+..-+...|......+.
T Consensus 90 ~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~L 169 (497)
T COG5265 90 LVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVL 169 (497)
T ss_pred HHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHH
Confidence 55555443333322 22233344444444455666779999999999999999888887665544333332222222222
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhh
Q 000503 505 VFFWAT--TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHEL 582 (1459)
Q Consensus 505 ~~~~~~--~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~ 582 (1459)
++.... ...+....+.+...+..+.+|.+...-.-++...+..|++.+......+-+++...++..+.+..+-.....
T Consensus 170 n~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~ 249 (497)
T COG5265 170 NFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDA 249 (497)
T ss_pred HHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccC
Confidence 211110 111122233444456678999999999999999999999999999999999999999998888543221110
Q ss_pred hhhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc
Q 000503 583 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 662 (1459)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~ 662 (1459)
. ..++. .......+.|++++|.|.++ +++|+++||++++|+.++|||++|+||||++++|.+.|+
T Consensus 250 p---da~~L-------~~~~~g~v~F~~V~F~y~~~-----r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD 314 (497)
T COG5265 250 P---DAPPL-------WPVRLGAVAFINVSFAYDPR-----RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYD 314 (497)
T ss_pred C---CCccc-------cccccceEEEEEEEeecccc-----chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhC
Confidence 0 01110 00234679999999999754 455999999999999999999999999999999999999
Q ss_pred CCCeEEEEcC-------------cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCccccc
Q 000503 663 LTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIG 728 (1459)
Q Consensus 663 ~~~G~i~~~~-------------~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig 728 (1459)
+++|.|.++| .||.|||+..|||.|+..||.+|++ ..++...++.++.++.+.|+.+|+|++|.||
T Consensus 315 ~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vg 394 (497)
T COG5265 315 VNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVG 394 (497)
T ss_pred CcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccc
Confidence 9999999987 4999999999999999999999986 4567788899999999999999999999999
Q ss_pred CCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeC
Q 000503 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 808 (1459)
Q Consensus 729 ~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~ 808 (1459)
|+|-.||||+|||||+||++.++|+|++|||+|||||.+|++.|... +.. ..+|+|.+++.||++.+-.||+|++|++
T Consensus 395 erglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~-l~~-~~~~rttlviahrlsti~~adeiivl~~ 472 (497)
T COG5265 395 ERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAA-LRE-VSAGRTTLVIAHRLSTIIDADEIIVLDN 472 (497)
T ss_pred hheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHH-HHH-HhCCCeEEEEeehhhhccCCceEEEeeC
Confidence 99999999999999999999999999999999999999999998776 433 5689999999999999999999999999
Q ss_pred CeEEEecCHHHHHhccccCcc
Q 000503 809 GQVKWIGSSADLAVSLYSGFW 829 (1459)
Q Consensus 809 G~i~~~g~~~~l~~~~~~~~~ 829 (1459)
|+|+|.|+|+|++..++.+.+
T Consensus 473 g~i~erg~h~~ll~~~g~ya~ 493 (497)
T COG5265 473 GRIVERGTHEELLAAGGLYAE 493 (497)
T ss_pred CEEEecCcHHHHHHcCChHHH
Confidence 999999999999988766543
No 102
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.7e-52 Score=476.13 Aligned_cols=236 Identities=34% Similarity=0.623 Sum_probs=225.6
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
|.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|.+||.|+.+++...+|+++
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999997656679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1301 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1301 ~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||||+|.+|++|+++|++++...++++++++++.+++.+.++.+ ++++.++++|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999988777889999999999999999987 999999999999999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000503 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1458 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~~g 1458 (1459)
|||||||++||+++++.+++.|++.++++|||+||||++++..||||++|++|+++|.|+|++|++++ +.|++++++++
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~-~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEK-SHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCc-HHHHHHHhhcc
Confidence 99999999999999999999999888899999999999999999999999999999999999999964 79999998765
No 103
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=7.4e-51 Score=469.40 Aligned_cols=442 Identities=26% Similarity=0.381 Sum_probs=343.0
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..+++++.+-.|+. -.+++||||++++||+.++.|.||+|||||++.|.|.|+|++|+|.++|
T Consensus 3 ~~l~~~~itK~f~~------~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA 76 (501)
T COG3845 3 PALEMRGITKRFPG------VVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDA 76 (501)
T ss_pred ceEEEeccEEEcCC------EEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHH
Confidence 35788888888762 3459999999999999999999999999999999999999999999998
Q ss_pred ---cEEEEcCCCCCCCC-CHHHHhccCCCC------C----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHH
Q 000503 673 ---SIAYVPQVPWILSG-TIRDNILFGKNY------D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~~-ti~~nI~~g~~~------~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 738 (1459)
.||.|.|++-|+.. ||.|||..|.+- | .++.++..+.++|+-|.+ ++...||=|+
T Consensus 77 ~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~-----------~~V~dLsVG~ 145 (501)
T COG3845 77 IRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPD-----------AKVADLSVGE 145 (501)
T ss_pred HHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcc-----------ceeecCCcch
Confidence 49999999998866 999999998753 2 345667777777776654 3455899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCH
Q 000503 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 817 (1459)
Q Consensus 739 kqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~ 817 (1459)
||||.|-+|||++|++||||||||.|-|...+++|+. +......|+|||+|||+++.+.. ||++-||++|+++..-+
T Consensus 146 qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~-l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~- 223 (501)
T COG3845 146 QQRVEILKALYRGARLLILDEPTAVLTPQEADELFEI-LRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVD- 223 (501)
T ss_pred hHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeec-
Confidence 9999999999999999999999999999999999987 33335679999999999999876 99999999999753211
Q ss_pred HHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhhhHHHHHhcccchHHHHHHHHhhhh
Q 000503 818 ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG 897 (1459)
Q Consensus 818 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 897 (1459)
.. . +. +.+++
T Consensus 224 -~~-----------~---------------------------~~-------t~~el------------------------ 233 (501)
T COG3845 224 -PV-----------A---------------------------ET-------TEEEL------------------------ 233 (501)
T ss_pred -CC-----------C---------------------------CC-------CHHHH------------------------
Confidence 00 0 00 00000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 898 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 977 (1459)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 977 (1459)
.
T Consensus 234 ---------a---------------------------------------------------------------------- 234 (501)
T COG3845 234 ---------A---------------------------------------------------------------------- 234 (501)
T ss_pred ---------H----------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 978 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1057 (1459)
Q Consensus 978 ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~ 1057 (1459)
T Consensus 235 -------------------------------------------------------------------------------- 234 (501)
T COG3845 235 -------------------------------------------------------------------------------- 234 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1058 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1137 (1459)
Q Consensus 1058 ~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 1137 (1459)
++
T Consensus 235 ----------~l-------------------------------------------------------------------- 236 (501)
T COG3845 235 ----------EL-------------------------------------------------------------------- 236 (501)
T ss_pred ----------HH--------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCC
Q 000503 1138 SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW 1217 (1459)
Q Consensus 1138 ~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~w 1217 (1459)
.+ + .... .+.+ .++.-
T Consensus 237 ------Mv-G--~~v~------------------------------------------------~~~~-------~~~~~ 252 (501)
T COG3845 237 ------MV-G--REVV------------------------------------------------LRVV-------KPPST 252 (501)
T ss_pred ------hc-C--Cccc------------------------------------------------cccc-------cCCCC
Confidence 00 0 0000 0000 00111
Q ss_pred CCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeC-CCCChHHH
Q 000503 1218 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNI-INTPVRDL 1296 (1459)
Q Consensus 1218 p~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di-~~i~~~~l 1296 (1459)
|..-.++++|++..-+.+ -+.+++|||+|++||.+||.|-.|-|-+-|+.+|.|+..|.+|+|.++|.|+ ...+....
T Consensus 253 pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~ 331 (501)
T COG3845 253 PGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRER 331 (501)
T ss_pred CCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHH
Confidence 233468999999865433 3579999999999999999999999999999999999999999999999997 66677776
Q ss_pred hc-ccEEEeCCCc----CCCccHHHhcCcCCCCCh-----H-HHHHHHHHhcHHHHHHhC-----CCchhhhcCCCCCCh
Q 000503 1297 RG-RFAVVPQSPF----LFEGSLRDNLDPFHMNDD-----L-KIWSVLEKCHVKEEVEAV-----GLETFVKESGISFSV 1360 (1459)
Q Consensus 1297 R~-~i~~VpQdp~----lf~gTIReNLdp~~~~~d-----~-ei~~aL~~~~l~~~i~~l-----GLdt~v~e~G~~LSg 1360 (1459)
|+ .+++||.|.. ..+-|+.||+-+.....+ - -=|++.++ ...+.++.+ +.+++ ..+|||
T Consensus 332 r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~-~a~~li~~fdVr~~~~~~~----a~~LSG 406 (501)
T COG3845 332 RRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRK-FARELIEEFDVRAPSPDAP----ARSLSG 406 (501)
T ss_pred HhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHH-HHHHHHHHcCccCCCCCcc----hhhcCC
Confidence 65 5999999984 456699999854322111 0 00112211 123445544 33333 347999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecC
Q 000503 1361 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1438 (1459)
Q Consensus 1361 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~ 1438 (1459)
|+.|++-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|++|+-.|+.+.. ||||.||.+|+++...+
T Consensus 407 GNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~ 486 (501)
T COG3845 407 GNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVP 486 (501)
T ss_pred cceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceecccc
Confidence 99999999999999999999999999999999999999887764 69999999999999876 89999999999998887
Q ss_pred hhH
Q 000503 1439 PQT 1441 (1459)
Q Consensus 1439 p~e 1441 (1459)
|++
T Consensus 487 ~~~ 489 (501)
T COG3845 487 PEE 489 (501)
T ss_pred ccc
Confidence 776
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-48 Score=458.25 Aligned_cols=229 Identities=27% Similarity=0.390 Sum_probs=204.6
Q ss_pred CCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCC
Q 000503 1215 PDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNII 1289 (1459)
Q Consensus 1215 ~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~ 1289 (1459)
.+||..+.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+|+.
T Consensus 73 ~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~ 152 (329)
T PRK14257 73 EDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTR 152 (329)
T ss_pred CCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcc
Confidence 4699999999999999997555679999999999999999999999999999999999997 57999999999997
Q ss_pred --CCChHHHhcccEEEeCCCcCCCccHHHhcCcC---CCCChHHH-----HHHHHHhcHHHHHHhCCCchhhhcCCCCCC
Q 000503 1290 --NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF---HMNDDLKI-----WSVLEKCHVKEEVEAVGLETFVKESGISFS 1359 (1459)
Q Consensus 1290 --~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~---~~~~d~ei-----~~aL~~~~l~~~i~~lGLdt~v~e~G~~LS 1359 (1459)
.++...+|++++||||+|.+|++|+++|+++. ...++++. .++++.+++++ ++++.+++.|.+||
T Consensus 153 ~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----~l~~~~~~~~~~LS 227 (329)
T PRK14257 153 SKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWD-----EVKDDLDKAGNALS 227 (329)
T ss_pred ccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcc-----hhhhhhhCCcccCC
Confidence 45667899999999999999999999999843 22444444 34455555433 45678899999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecC
Q 000503 1360 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1438 (1459)
Q Consensus 1360 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~ 1438 (1459)
||||||+|||||++++|+|||||||||+||+++.+.+++.|++.++++|+|+|||+++++.+ ||||+||++|+|+|.|+
T Consensus 228 gGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~ 307 (329)
T PRK14257 228 GGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGE 307 (329)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999999889999999999999998 99999999999999999
Q ss_pred hhHHhccCCc
Q 000503 1439 PQTLLQDECS 1448 (1459)
Q Consensus 1439 p~eLl~~~~~ 1448 (1459)
|+++..++..
T Consensus 308 ~~~l~~~~~~ 317 (329)
T PRK14257 308 TKTIFIHPKN 317 (329)
T ss_pred HHHHhcCCCc
Confidence 9999987653
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.7e-46 Score=385.81 Aligned_cols=220 Identities=28% Similarity=0.434 Sum_probs=190.2
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCC-CCChHHHhccc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII-NTPVRDLRGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~-~i~~~~lR~~i 1300 (1459)
-|+++||+.+|.+. .||||||++|++||++.||||||||||||+++|.++-+|++|+|.+||.++. ..+...+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999754 5999999999999999999999999999999999999999999999998774 34789999999
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
|+|+|+.-||+- |+-||+.... ..+.+|..+ + ..+.++..||......-..+|||||+||++|||||.-+
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~---~--A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~ 154 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEARE---K--ALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMD 154 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHH---H--HHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCC
Confidence 999999999986 9999986432 122222111 1 11233444666666677789999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCc
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1448 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~ 1448 (1459)
|+|+++|||||+||+|.-..+.+++++.. .|.|.|+|||.+...++ +|||+.||+|+|+|.|+|+++..++..
T Consensus 155 P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~ 229 (240)
T COG1126 155 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKS 229 (240)
T ss_pred CCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCC
Confidence 99999999999999999999999998875 58899999999999998 699999999999999999999998764
No 106
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-45 Score=399.64 Aligned_cols=221 Identities=29% Similarity=0.440 Sum_probs=191.7
Q ss_pred EEEEEEEEEecCC---CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCC---hHHH
Q 000503 1223 IEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDL 1296 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---~~~l 1296 (1459)
|+++||++.|... ...+|+||||+|++||+.||+|+||||||||++++-++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999763 246899999999999999999999999999999999999999999999998887776 5566
Q ss_pred hcccEEEeCCCcCCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000503 1297 RGRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1459)
Q Consensus 1297 R~~i~~VpQdp~lf~-gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1459)
|++|++|+|++-|++ -|+.+|+.+-- ..+.+|+.+ ...+.++-.||....+.-..+||||||||++|||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~-----RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIARAL 156 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQ-----RVAELLELVGLSDKADRYPAQLSGGQKQRVAIARAL 156 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHH-----HHHHHHHHcCChhhhccCchhcCcchhhHHHHHHHH
Confidence 789999999999998 69999996431 233444322 122333333888778888889999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCc
Q 000503 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1448 (1459)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~ 1448 (1459)
..+|+||+.|||||+||++|-+.|.+.|++.- -|-|+++|||.++.+++ ||||.||++|+|+|.|+..|+..+|..
T Consensus 157 a~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~Pk~ 235 (339)
T COG1135 157 ANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANPKH 235 (339)
T ss_pred hcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCcch
Confidence 99999999999999999999999999987653 38899999999999998 999999999999999999999998853
No 107
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-45 Score=375.72 Aligned_cols=220 Identities=30% Similarity=0.430 Sum_probs=200.1
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCC-----ceEEECCEeCCC--CCh
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG-----GQILVDGLNIIN--TPV 1293 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~-----G~I~IDG~di~~--i~~ 1293 (1459)
..++++|+++.|.. ..+|+|||++|++++.+|++|||||||||++++|-|+.+..+ |+|.+||.||-+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 35899999999974 459999999999999999999999999999999999999876 999999999976 679
Q ss_pred HHHhcccEEEeCCCcCCCccHHHhcCcCCC----C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp~lf~gTIReNLdp~~~----~---~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
-.+|+++|+|.|.|--|+.||+||+.++-. . -|+-+.++|+++.||+.++. .+.+.+..|||||+|||
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-----rL~~sa~~LSGGQQQRL 158 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-----RLHKSALGLSGGQQQRL 158 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-----HhhCCccCCChhHHHHH
Confidence 999999999999999999999999976522 1 24557889999999998864 45566778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
||||||.-+|+||+||||||+||+.+...|.+.|.+..++-||++|||.+.-... +|+...+-.|+++|+|+-+++..+
T Consensus 159 cIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~~ 238 (253)
T COG1117 159 CIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFTN 238 (253)
T ss_pred HHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhcC
Confidence 9999999999999999999999999999999999999899999999999998766 699999999999999999999987
Q ss_pred CC
Q 000503 1446 EC 1447 (1459)
Q Consensus 1446 ~~ 1447 (1459)
|.
T Consensus 239 P~ 240 (253)
T COG1117 239 PK 240 (253)
T ss_pred cc
Confidence 75
No 108
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1e-43 Score=406.35 Aligned_cols=238 Identities=44% Similarity=0.744 Sum_probs=221.3
Q ss_pred CCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhc
Q 000503 1219 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRG 1298 (1459)
Q Consensus 1219 ~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~ 1298 (1459)
..|.|+++|++++|+....++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46789999999999754356999999999999999999999999999999999999999999999999999999889999
Q ss_pred ccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1299 RFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1299 ~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+++|+||+|.+|++|+++|+++.....+++++++++.+++.+.++.+ |+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876544556788889999999988888 9999999999999999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHh
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1456 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~ 1456 (1459)
++|||||||++||+++.+.+.+.+++..+++|+|++||+++.+..||||++|++|++++.|+++++.+.+++.|+.++..
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 99999999999999999999999988777899999999999999999999999999999999999998877889988764
No 109
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=5.9e-44 Score=412.18 Aligned_cols=196 Identities=24% Similarity=0.326 Sum_probs=157.6
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|.|+||+|+|+++ +..++++||-|.++++|++|||||+|||||++++.+.+.|..|.|.-.-. -+++
T Consensus 389 vi~~~nv~F~y~~~-~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDN-PMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKLP 456 (614)
T ss_pred eEEEeccccCCCCc-chhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccch
Confidence 48999999999765 47999999999999999999999999999999999999999999864321 2333
Q ss_pred EEeCCC---cCCCccHHHhcCcC-C-CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1302 VVPQSP---FLFEGSLRDNLDPF-H-MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1302 ~VpQdp---~lf~gTIReNLdp~-~-~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+-.|.- .-++-|.-+|+.|- . ....+++...|.++||.... .+.++ .+||+|||.|+++||.+++.|
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~----q~~p~----~~LS~Gqr~rVlFa~l~~kqP 528 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDA----QVVPM----SQLSDGQRRRVLFARLAVKQP 528 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccc----cccch----hhcccccchhHHHHHHHhcCC
Confidence 334433 34566777776543 2 23456777788888765321 22223 379999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEe-cCh
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQ-GNP 1439 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~-G~p 1439 (1459)
.||+|||||++||.+|-....++|.++ ..+||+|+|+...|.. +++|.+.++|.+... |..
T Consensus 529 ~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i 591 (614)
T KOG0927|consen 529 HLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDI 591 (614)
T ss_pred cEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecCccH
Confidence 999999999999999999999999764 3489999999999987 799999999998754 444
No 110
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-44 Score=378.23 Aligned_cols=223 Identities=31% Similarity=0.476 Sum_probs=194.5
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+|+|||++|.+ ..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 799999999973 469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcCCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCch--hhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET--FVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt--~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
|-|.--||+. ||.||+..-. ..+.+++.+- ..+.++..|||. ....-...|||||+||+.+||||..+|
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r-----~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP 154 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKR-----ADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADP 154 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCC
Confidence 9999999986 9999985322 2344444322 334444448875 345567789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHH
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSS 1452 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~ 1452 (1459)
+|++||||.++||+-|...+|+-+.+..+ ++|+|+|||++++... +|||.||++|+|+.+|+|++++++|...|-+
T Consensus 155 ~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~FV~ 233 (309)
T COG1125 155 PILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDFVE 233 (309)
T ss_pred CeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHHHH
Confidence 99999999999999999999998876533 8999999999998655 8999999999999999999999998766643
No 111
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=8.9e-43 Score=394.46 Aligned_cols=232 Identities=35% Similarity=0.569 Sum_probs=211.9
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000503 1303 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1459)
Q Consensus 1303 VpQdp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1459)
+||++.+|+.|+++|+..... .+.+++.++++..++.+.++.+ |+++..+..+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 999999999999999976543 3455667777888888888887 8898888888999999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHH
Q 000503 1380 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVR 1455 (1459)
Q Consensus 1380 lLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~ 1455 (1459)
||||||++||+.+.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|++++++++ .+.|+.+++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 999999999999999999999988778999999999999988999999999999999999999986 457887765
No 112
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-43 Score=414.16 Aligned_cols=262 Identities=22% Similarity=0.300 Sum_probs=217.1
Q ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCcccCCCCceEE
Q 000503 528 HQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVI 607 (1459)
Q Consensus 528 ~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 607 (1459)
+.++++++|+++++++.+..|+..+|..... ..|+++|+..++.+...... . .+....++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~i~ 82 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE--D-----------FNHANVFE 82 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC--C-----------CCcCceEE
Confidence 4789999999999999999999887765433 56999998765532210000 0 12345799
Q ss_pred EEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC----------
Q 000503 608 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---------- 672 (1459)
Q Consensus 608 ~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~---------- 672 (1459)
++|+++.|... . +++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 83 ~~nls~~y~~~-~---~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~ 158 (329)
T PRK14257 83 IRNFNFWYMNR-T---KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISS 158 (329)
T ss_pred EEeeEEEecCC-C---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 99999999642 1 235999999999999999999999999999999999996 5799987643
Q ss_pred -----cEEEEcCCCCCCCCCHHHHhccCCCCC----HH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHH
Q 000503 673 -----SIAYVPQVPWILSGTIRDNILFGKNYD----PQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1459)
Q Consensus 673 -----~i~y~~Q~~~l~~~ti~~nI~~g~~~~----~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 739 (1459)
.++||||+||++++||+|||.|+..++ ++ .|.++++.|+|..+++ +.++++|.+||||||
T Consensus 159 ~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~-------~~~~~~~~~LSgGqk 231 (329)
T PRK14257 159 LELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVK-------DDLDKAGNALSGGQQ 231 (329)
T ss_pred HhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhh-------hhhhCCcccCCHHHH
Confidence 599999999999999999999874322 22 2677888888866553 678899999999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHH
Q 000503 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 818 (1459)
Q Consensus 740 qRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~ 818 (1459)
|||+||||++++|+|+||||||+|||+++.+++.+. +.. +.+++|+|+|||+++++.. ||+|++|++|+|++.|+++
T Consensus 232 qRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~-i~~-l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~ 309 (329)
T PRK14257 232 QRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL-ILE-LKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETK 309 (329)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999986554 554 4567899999999999887 9999999999999999999
Q ss_pred HHHh
Q 000503 819 DLAV 822 (1459)
Q Consensus 819 ~l~~ 822 (1459)
++..
T Consensus 310 ~l~~ 313 (329)
T PRK14257 310 TIFI 313 (329)
T ss_pred HHhc
Confidence 9854
No 113
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2e-42 Score=387.37 Aligned_cols=219 Identities=53% Similarity=0.912 Sum_probs=205.6
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
|.++++|++++|+....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56899999999975445799999999999999999999999999999999999999999999999999988988999999
Q ss_pred EEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1301 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1301 ~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+|+||+|.+|++|++||++++....++++.++++..++.+.+..+ |+++..++.+.+||+|||||++||||++++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999987666777889999999999998876 999999888999999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecCh
Q 000503 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNP 1439 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p 1439 (1459)
+||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999987778999999999999999999999999999998864
No 114
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-41 Score=377.35 Aligned_cols=207 Identities=46% Similarity=0.864 Sum_probs=187.4
Q ss_pred CCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH
Q 000503 1217 WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL 1296 (1459)
Q Consensus 1217 wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l 1296 (1459)
||..+.++++|++++|+....++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543469999999999999999999999999999999999999999999999999998888889
Q ss_pred hcccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1297 RGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1297 R~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
|++++|+||+|.+|++|+++|+.++...+++++.++++ +++....||+||+||++||||++++|
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~----------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR----------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh----------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999998665444444433332 34556789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecCh
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNP 1439 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p 1439 (1459)
+|+||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|+|
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999988778999999999999988999999999999998875
No 115
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.3e-42 Score=394.78 Aligned_cols=191 Identities=23% Similarity=0.314 Sum_probs=161.2
Q ss_pred CccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcc
Q 000503 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1299 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1299 (1459)
...+++.+|+|.|.++.++.+++++++++.-+++++||++|+||||+++++.+-.+|..|.+-+.+ |.+
T Consensus 360 ~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 346999999999999877899999999999999999999999999999999999999999988865 789
Q ss_pred cEEEeCCCcCCCccHHHhc---Cc----CCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCC-CCCChhHHHHHHHHHH
Q 000503 1300 FAVVPQSPFLFEGSLRDNL---DP----FHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESG-ISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1300 i~~VpQdp~lf~gTIReNL---dp----~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G-~~LSgGQrQrl~LARA 1371 (1459)
|+|-.|.-+=| ..-|. |+ +...+++|+.+.|... |++..+...+ ..||||||-|+++|-.
T Consensus 429 i~~f~Qhhvd~---l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~---------Gl~g~la~~si~~LSGGQKsrvafA~~ 496 (582)
T KOG0062|consen 429 IKYFAQHHVDF---LDKNVNAVDFMEKSFPGKTEEEIRRHLGSF---------GLSGELALQSIASLSGGQKSRVAFAAC 496 (582)
T ss_pred ecchhHhhhhH---HHHHhHHHHHHHHhCCCCCHHHHHHHHHhc---------CCCchhhhccccccCCcchhHHHHHHH
Confidence 99999976532 22221 11 1123777877666554 6666665544 4699999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEE
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVE 1435 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE 1435 (1459)
...+|.+|||||||..||.++-..+-++|+. |+| -||+|+|+.+.+.. |+.++|.++|+|.-
T Consensus 497 ~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~-F~G-GVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 497 TWNNPHLLVLDEPTNHLDRDSLGALAKALKN-FNG-GVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred hcCCCcEEEecCCCccccHHHHHHHHHHHHh-cCC-cEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 9999999999999999999999999999976 444 79999999999987 89999999999975
No 116
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=398.81 Aligned_cols=223 Identities=24% Similarity=0.384 Sum_probs=190.6
Q ss_pred CCccEEEEEEEEEecCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCC----
Q 000503 1219 FQGLIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT---- 1291 (1459)
Q Consensus 1219 ~~g~I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i---- 1291 (1459)
....|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 344699999999997432 3699999999999999999999999999999999999999999999999998653
Q ss_pred ------------ChHHHhcccEEEeCCC--cCCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCc-hhhhc
Q 000503 1292 ------------PVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKE 1353 (1459)
Q Consensus 1292 ------------~~~~lR~~i~~VpQdp--~lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e 1353 (1459)
+...+|++++||+|+| .+|++|+++|+.+... .++++. .++ ..+.++.+|++ ...++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~---~~~--~~~~l~~~gL~~~~~~~ 172 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEA---KKL--AKFYLNKMGLDDSYLER 172 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHH---HHH--HHHHHHHcCCChhHhcC
Confidence 3567899999999998 6899999999965421 223322 222 23456666886 56788
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEEeCC
Q 000503 1354 SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHG 1431 (1459)
Q Consensus 1354 ~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlVl~~G 1431 (1459)
.+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 888999999999999999999999999999999999999999999998753 5899999999999875 59999999999
Q ss_pred eEEEecChhHHhccC
Q 000503 1432 HLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1432 ~IvE~G~p~eLl~~~ 1446 (1459)
++++.|+|+++.+++
T Consensus 253 ~i~~~g~~~~~~~~~ 267 (320)
T PRK13631 253 KILKTGTPYEIFTDQ 267 (320)
T ss_pred EEEEeCCHHHHhcCH
Confidence 999999999887643
No 117
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.3e-41 Score=399.56 Aligned_cols=223 Identities=25% Similarity=0.388 Sum_probs=188.8
Q ss_pred EEEEEEEEEecCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH---Hh
Q 000503 1223 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1297 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1297 (1459)
|+++||+++|+.+ ..++|+|+||+|++||.+||+|+||||||||+++|.|+.+|++|+|.+||.|+..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cccEEEeCCCcCCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1298 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1298 ~~i~~VpQdp~lf~-gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
++|++|||++.+|+ .|+++|+.+.. ..+.+++.+ ...+.++.+|++.........||||||||++|||||+
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~ 156 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR-----KVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALA 156 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHH
Confidence 89999999999996 69999996421 122222211 1223334446655556667789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1450 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1450 (1459)
.+|+|||||||||+||+++.+.+.+.|++..+ +.|||+|||+++.+.. ||||++|++|+|+|.|++++++.++...+
T Consensus 157 ~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~~~ 236 (343)
T TIGR02314 157 SNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKTPL 236 (343)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCcHH
Confidence 99999999999999999999999999988753 7899999999999976 89999999999999999999987665433
No 118
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-41 Score=383.02 Aligned_cols=229 Identities=34% Similarity=0.582 Sum_probs=208.0
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+....++++|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999996543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000503 1303 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1459)
Q Consensus 1303 VpQdp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1459)
+||+|.+|+.|++||+..+.. ...+++.+.++.+++.+.++.+ |+++..+....+||+|||||++|||||+++|+++
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999986533 3445666777888888888887 8888888888899999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHH
Q 000503 1380 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSS 1452 (1459)
Q Consensus 1380 lLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~ 1452 (1459)
||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|+++++.++. +.|+.
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~~~~~ 232 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQG-GVYAK 232 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcC-cchhh
Confidence 9999999999999999999999887889999999999999999999999999999999999998754 45554
No 119
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-41 Score=379.27 Aligned_cols=225 Identities=40% Similarity=0.652 Sum_probs=206.9
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
|.|+++|++++|+. ..++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDE-KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCC-CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 46899999999963 23599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEeCCCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1301 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1301 ~~VpQdp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
+|+||+|.+|++|+++|+..+.. ..++++.++++.+++.+.++.+ |+++.++....+||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999976543 3456777888889999888887 89999988888999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccC
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
+|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+..||+|++|++|++++.|+++++.++.
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~~ 228 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAKK 228 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhhC
Confidence 999999999999999999999998876789999999999999889999999999999999999987653
No 120
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-40 Score=420.90 Aligned_cols=199 Identities=24% Similarity=0.331 Sum_probs=162.9
Q ss_pred CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC--CCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCC-
Q 000503 1235 SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--ICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFE- 1311 (1459)
Q Consensus 1235 ~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~--~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~- 1311 (1459)
+....|+|||=-++||...|++|.||||||||++.|.+=.. ..+|+|+|||.+..+ +..++++|||.|++.-.+
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 34568999999999999999999999999999999997653 247999999999765 788999999999886444
Q ss_pred ccHHHhcCcC------CCCChHH----HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC-CEEE
Q 000503 1312 GSLRDNLDPF------HMNDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS-KVLC 1380 (1459)
Q Consensus 1312 gTIReNLdp~------~~~~d~e----i~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~-~ILl 1380 (1459)
-||||-|.+. .+.+++| +.++++-.+|.+.- |..||.-|..||..||.||.||=-|..|| .||.
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-----daiVG~~G~GLs~eQRKrLTIgVELvA~P~~ilF 953 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-----DALVGLPGSGLSTEQRKRLTIGVELVANPSSILF 953 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-----hhhccCCCCCCCHHHhceeeEEEEEecCCceeEE
Confidence 5999998542 2233333 33344444443332 45688878889999999999999999999 8999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh--HhhcCEEEEEe-CCeEEEecChhH
Q 000503 1381 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST--VLNMDEILILD-HGHLVEQGNPQT 1441 (1459)
Q Consensus 1381 LDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~t--i~~~DrIlVl~-~G~IvE~G~p~e 1441 (1459)
||||||+||+++...|.+.+|+.. .|+||++.-|+.+. .+.+|+++.|+ .|+.|.+|++.+
T Consensus 954 LDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 954 LDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred ecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 999999999999999999999874 69999999999885 35689999995 589999888654
No 121
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.7e-42 Score=376.61 Aligned_cols=213 Identities=29% Similarity=0.450 Sum_probs=186.7
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.++++|++++|+ ..++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.+||.|+.+++.+++-++++
T Consensus 2 ~L~~~~ls~~y~--~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYG--GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEEC--CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 378999999997 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCcC-CCccHHHhcCcCC--------CCC--hH-HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000503 1302 VVPQSPFL-FEGSLRDNLDPFH--------MND--DL-KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1459)
Q Consensus 1302 ~VpQdp~l-f~gTIReNLdp~~--------~~~--d~-ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LA 1369 (1459)
||||++.. |.-||+|-+.++. ..+ |+ .+.++|+.+++.++.+ ..-..||||||||+.||
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~---------r~~~~LSGGerQrv~iA 150 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLAD---------RPVDELSGGERQRVLIA 150 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhc---------CcccccChhHHHHHHHH
Confidence 99999754 5559998875432 112 33 4667788887766543 22335999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hcCEEEEEeCCeEEEecChhHHhcc
Q 000503 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
|||.++|+||+||||||+||....-.+++.+++.. +++|+|+|.|+++... .||++++|++|+++..|+|+|.+..
T Consensus 151 rALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~ 229 (258)
T COG1120 151 RALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTE 229 (258)
T ss_pred HHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCH
Confidence 99999999999999999999999999999999875 4799999999998765 5899999999999999999999864
No 122
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-41 Score=361.29 Aligned_cols=225 Identities=29% Similarity=0.463 Sum_probs=185.4
Q ss_pred cEEEEEEEEEecCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCC-ChHHHhc
Q 000503 1222 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT-PVRDLRG 1298 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i-~~~~lR~ 1298 (1459)
.++++|+++.|+... .++|+||||+|.+||.+||+|+||||||||.++|.|+.+|++|+|.+||.++... +....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997542 2599999999999999999999999999999999999999999999999776553 3446788
Q ss_pred ccEEEeCCCc--CCC-ccHHHhc----CcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000503 1299 RFAVVPQSPF--LFE-GSLRDNL----DPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1370 (1459)
Q Consensus 1299 ~i~~VpQdp~--lf~-gTIReNL----dp~~~-~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LAR 1370 (1459)
.+.+|+|||. +=+ -||++-| .+.+. ...++++++|+.+||.+. ........||||||||+||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~--------~l~R~P~eLSGGQ~QRiaIAR 154 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPS--------FLDRRPHELSGGQRQRIAIAR 154 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHH--------HHhcCchhcChhHHHHHHHHH
Confidence 8999999996 222 2555554 33221 123456677776665433 234556679999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000503 1371 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1447 (1459)
Q Consensus 1371 ALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1447 (1459)
||.-+|++||+|||||+||.-..+.|.+.+.+..+ +-|.|+|||+++.+.. ||||+||++|+++|.++-+++...+.
T Consensus 155 AL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~~~ 234 (252)
T COG1124 155 ALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSHPS 234 (252)
T ss_pred HhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcCCc
Confidence 99999999999999999999999999999988765 4599999999999987 89999999999999999999998755
Q ss_pred cHHHHHH
Q 000503 1448 SVFSSFV 1454 (1459)
Q Consensus 1448 ~~f~~l~ 1454 (1459)
..|.+.+
T Consensus 235 h~ytr~L 241 (252)
T COG1124 235 HPYTREL 241 (252)
T ss_pred cHHHHHH
Confidence 5665544
No 123
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-41 Score=371.72 Aligned_cols=210 Identities=29% Similarity=0.457 Sum_probs=184.4
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++|++++|+.. +||+||||+|++||.+||+||||||||||+++++|+++|++|+|.++|.+++.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 59999999999755 49999999999999999999999999999999999999999999999998776543 57899
Q ss_pred EEeCCC---cCCCccHHHhcCcCCC-----------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000503 1302 VVPQSP---FLFEGSLRDNLDPFHM-----------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1459)
Q Consensus 1302 ~VpQdp---~lf~gTIReNLdp~~~-----------~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~ 1367 (1459)
||||.. .-|+-||+|-+..+.. .+.+++.+||++++++++. |-.++ .|||||+||+.
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-----~r~i~----~LSGGQ~QRV~ 149 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-----DRQIG----ELSGGQKQRVL 149 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-----CCccc----ccCcHHHHHHH
Confidence 999955 4588999999865421 1237889999999998764 33444 59999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~-~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
|||||+++|++|+|||||+++|+.++..|.+.|.+..+ ||||++|+|+++.+.+ +|+|+.|. +++...|+|++.+..
T Consensus 150 lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~~ 228 (254)
T COG1121 150 LARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLTE 228 (254)
T ss_pred HHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccCH
Confidence 99999999999999999999999999999999988764 8999999999999987 79999995 578899999999875
Q ss_pred C
Q 000503 1446 E 1446 (1459)
Q Consensus 1446 ~ 1446 (1459)
+
T Consensus 229 ~ 229 (254)
T COG1121 229 E 229 (254)
T ss_pred H
Confidence 3
No 124
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.2e-41 Score=378.75 Aligned_cols=232 Identities=37% Similarity=0.639 Sum_probs=211.4
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999643 459999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EeCCCcCCCccHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000503 1303 VPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1459)
Q Consensus 1303 VpQdp~lf~gTIReNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1459)
+||+|.+|++|+++|+.... ..+++++.++++.+++.+.+..+ |+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999997643 23566677888888998888887 8999998888899999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHh
Q 000503 1380 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1456 (1459)
Q Consensus 1380 lLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~~ 1456 (1459)
||||||++||+++.+.+.+.|++..++.|+|+++|+++.+..||++++|++|++++.|+++++.++ .+.|+.++.+
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~~ 235 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWKA 235 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHhc
Confidence 999999999999999999999887668899999999999999999999999999999999999875 4577776653
No 125
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-41 Score=355.12 Aligned_cols=199 Identities=28% Similarity=0.369 Sum_probs=171.0
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
|+++|++-+|.. ..+|+|||++|++||.++|+|||||||||||++|.|+-+|++|+|.++|
T Consensus 3 i~i~~l~K~fg~------~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R 76 (240)
T COG1126 3 IEIKNLSKSFGD------KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLR 76 (240)
T ss_pred EEEEeeeEEeCC------eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHH
Confidence 677888777653 2359999999999999999999999999999999999999999999998
Q ss_pred -cEEEEcCCCCCCCC-CHHHHhccCC----CCC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHH
Q 000503 673 -SIAYVPQVPWILSG-TIRDNILFGK----NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~~-ti~~nI~~g~----~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRv 742 (1459)
++|+|+|+..||.- ||.|||..+. ..+ +++-.+.++..+|.+..+..|. .|||||||||
T Consensus 77 ~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRV 145 (240)
T COG1126 77 RKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRV 145 (240)
T ss_pred HhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHH
Confidence 47899999999965 9999999863 222 2344566777777776665554 8999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHH
Q 000503 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1459)
Q Consensus 743 alARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 821 (1459)
||||||.-+|+++|+|||||||||+....+++- +......|.|.|+|||.+.+... ||||+.|++|+|+++|+++++-
T Consensus 146 AIARALaM~P~vmLFDEPTSALDPElv~EVL~v-m~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f 224 (240)
T COG1126 146 AIARALAMDPKVMLFDEPTSALDPELVGEVLDV-MKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFF 224 (240)
T ss_pred HHHHHHcCCCCEEeecCCcccCCHHHHHHHHHH-HHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHh
Confidence 999999999999999999999999999988875 33324568899999999999987 9999999999999999999875
Q ss_pred h
Q 000503 822 V 822 (1459)
Q Consensus 822 ~ 822 (1459)
.
T Consensus 225 ~ 225 (240)
T COG1126 225 D 225 (240)
T ss_pred c
Confidence 4
No 126
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.1e-40 Score=377.58 Aligned_cols=231 Identities=37% Similarity=0.611 Sum_probs=207.3
Q ss_pred EEEEEEEEEecCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1223 IEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
++++|++++|+.. ..++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4789999999643 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEeCCCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1302 VVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1302 ~VpQdp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
|+||+|.+|+.|++||+..... ...+++.+.++..++.+.+..+ |+++..+....+||||||||++||||++++|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999976432 3445667778888888888877 888888888889999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000503 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1454 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1454 (1459)
|||||||++||+.+.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|+++++.+.. +..+.++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQK-GVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcC-hhHHHHh
Confidence 99999999999999999999998876789999999999999889999999999999999999998754 4555554
No 127
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.6e-41 Score=383.02 Aligned_cols=221 Identities=29% Similarity=0.458 Sum_probs=193.1
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++||+++|++.. +|+|+||+|+.||.++++|||||||||++++|.|+.+|++|+|.|||.|+.++++++ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999997543 999999999999999999999999999999999999999999999999999999976 7899
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCCC---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHMN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~~---~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
+|+|+..||+. ||++||.+.-+. ..+|+.+.. .+..+.++++..+......||||||||++|||||.++|+
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV-----~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~ 153 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRV-----KEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPK 153 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHH-----HHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCC
Confidence 99999999987 999999865322 334443222 223334477777788888999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1451 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1451 (1459)
+++||||.|+||+.....+...|++..+ +.|+|.|||+....+. +|||+||++|+|.+.|+|.|+.+++...|-
T Consensus 154 v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n~fV 230 (338)
T COG3839 154 VFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPANLFV 230 (338)
T ss_pred EEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccchhh
Confidence 9999999999999999988888877543 6899999999888776 799999999999999999999998877664
No 128
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.1e-41 Score=353.71 Aligned_cols=228 Identities=28% Similarity=0.450 Sum_probs=196.4
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHh
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1297 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1297 (1459)
-.|++++|+++|.+ ..|++||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.|+.+++.+ .+|
T Consensus 7 ~~I~vr~v~~~fG~--~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 7 PLIEVRGVTKSFGD--RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred ceEEEeeeeeecCC--EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 46999999999964 4699999999999999999999999999999999999999999999999999988764 568
Q ss_pred cccEEEeCCCcCCCc-cHHHhcCc-CCCC---ChHHHHHHHHHhcHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHHH
Q 000503 1298 GRFAVVPQSPFLFEG-SLRDNLDP-FHMN---DDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1298 ~~i~~VpQdp~lf~g-TIReNLdp-~~~~---~d~ei~~aL~~~~l~~~i~~lGLdt~-v~e~G~~LSgGQrQrl~LARA 1371 (1459)
+++|++.|+.-||+. ||+||+.+ ..++ +++++.+ +.. ..++..||... ...-.+.||||.+.|.+||||
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~-lv~----~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARA 159 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRE-LVL----MKLELVGLRGAAADLYPSELSGGMRKRVALARA 159 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHH-HHH----HHHHhcCCChhhhhhCchhhcchHHHHHHHHHH
Confidence 999999999999987 99999964 3333 3344332 111 12333388777 445577899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCc
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1448 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~ 1448 (1459)
+.-+|+|+++|||||+||+-+...+-+.|++..+ +.|+|+|||+++++.. ||||+++.+|+|+-.|+|+|+.+.++-
T Consensus 160 ialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~sd~P 239 (263)
T COG1127 160 IALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLASDDP 239 (263)
T ss_pred HhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhCCCH
Confidence 9999999999999999999999999998887643 8999999999999987 699999999999999999999998887
Q ss_pred HHHHHHH
Q 000503 1449 VFSSFVR 1455 (1459)
Q Consensus 1449 ~f~~l~~ 1455 (1459)
..+++++
T Consensus 240 ~v~qf~~ 246 (263)
T COG1127 240 WVRQFFN 246 (263)
T ss_pred HHHHHhc
Confidence 7777664
No 129
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=375.81 Aligned_cols=226 Identities=31% Similarity=0.450 Sum_probs=192.6
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999963 36999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000503 1302 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLC 1380 (1459)
Q Consensus 1302 ~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1380 (1459)
|+||+|.+|+.|+++|+.......+.+ ...+.+.++.+|++ .........||||||||++||||++++|++||
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~lll 154 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEK------NVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLL 154 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcH------HHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999999999997542221111 01123344445665 34556677899999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHHHHH
Q 000503 1381 LDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFVR 1455 (1459)
Q Consensus 1381 LDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~~ 1455 (1459)
|||||++||.++.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++..++...|.+.+.
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~~~ 232 (241)
T PRK14250 155 LDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTKLFI 232 (241)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHHHHH
Confidence 999999999999999999998764 37999999999999876 8999999999999999999998766545655443
No 130
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-40 Score=368.89 Aligned_cols=215 Identities=31% Similarity=0.510 Sum_probs=192.2
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCC-CCChHHHhccc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII-NTPVRDLRGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~-~i~~~~lR~~i 1300 (1459)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 48999999999877 78999999999999999999999999999999999999999999999999998 48899999999
Q ss_pred EEEeCCC--cCCCccHHHhcCcCCC---CChHH----HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1301 AVVPQSP--FLFEGSLRDNLDPFHM---NDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1301 ~~VpQdp--~lf~gTIReNLdp~~~---~~d~e----i~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
++|.|+| .+|..||.+.+.++.. .+.+| +.++|+.+ |+.........+||||||||++||.+
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~v---------gl~~~~~r~p~~LSGGqkqRvaIA~v 152 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELV---------GLEELLDRPPFNLSGGQKQRVAIAGV 152 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHc---------CchhhccCCccccCCcceeeHHhhHH
Confidence 9999999 7999999999987643 24444 33444444 44444556677899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
|..+|+|||||||||+||+...+.+.+.+++..+ ++|+|+|||+++.+.. |||++||++|+++.+|+|+++.++.
T Consensus 153 La~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 153 LAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 9999999999999999999999999999998754 4799999999999998 8999999999999999999998864
No 131
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.3e-40 Score=370.52 Aligned_cols=217 Identities=37% Similarity=0.540 Sum_probs=196.9
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
|.++++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999964334699999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEEeCCCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1301 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1301 ~~VpQdp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
+|+||+|.+|..|++||+..... .+++++.+.++..++.+.++.. |+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998999999976432 3445677888999998888776 89998888888999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEec
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G 1437 (1459)
+|||||||++||.++.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988779999999999998765
No 132
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-40 Score=374.99 Aligned_cols=217 Identities=29% Similarity=0.442 Sum_probs=184.8
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh---HHHhcc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1299 (1459)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 478999999963 369999999999999999999999999999999999999999999999999987764 567889
Q ss_pred cEEEeCCCcCCCc-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1300 FAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1300 i~~VpQdp~lf~g-TIReNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
++|+||++.+|++ |+++|+.... ..+.++..+ ...+.++.+|++.........||||||||++|||||++
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~ 153 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIRE-----IVLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALAL 153 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 9999999999986 9999996531 122222211 12233444466555556666899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.|+++++.+..
T Consensus 154 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 228 (235)
T cd03261 154 DPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRASD 228 (235)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCCC
Confidence 9999999999999999999999999988643 7899999999999876 8999999999999999999998643
No 133
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-40 Score=390.94 Aligned_cols=224 Identities=27% Similarity=0.428 Sum_probs=191.0
Q ss_pred EEEEEEEEEecC--CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH---Hh
Q 000503 1223 IEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1297 (1459)
Q Consensus 1223 I~f~nVs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1297 (1459)
|+++|++++|+. ...++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cccEEEeCCCcCCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1298 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1298 ~~i~~VpQdp~lf~-gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
++++||||++.+|+ .|+++|+.+.. ..++++..+ .+.+.++.+|++........+||||||||++|||||+
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~ 156 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALA 156 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHH
Confidence 89999999999987 69999996531 122222211 2334555567776667777789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1450 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1450 (1459)
++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||||++|++|++++.|+++++..++...+
T Consensus 157 ~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~ 236 (343)
T PRK11153 157 SNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPKHPL 236 (343)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCcHH
Confidence 99999999999999999999999999988643 7899999999999876 89999999999999999999987654434
Q ss_pred H
Q 000503 1451 S 1451 (1459)
Q Consensus 1451 ~ 1451 (1459)
.
T Consensus 237 ~ 237 (343)
T PRK11153 237 T 237 (343)
T ss_pred H
Confidence 3
No 134
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.2e-40 Score=372.35 Aligned_cols=213 Identities=32% Similarity=0.458 Sum_probs=180.5
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccC-----CCCCceEEECCEeCCCCC--hHH
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT-----PICGGQILVDGLNIINTP--VRD 1295 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~-----~~~~G~I~IDG~di~~i~--~~~ 1295 (1459)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++.+.+ ...
T Consensus 1 i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGD--KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 578999999964 36999999999999999999999999999999999999 999999999999998776 567
Q ss_pred HhcccEEEeCCCcCCCccHHHhcCcCCC---C-ChHHHHHHHHHhcHHHHHHhCCCchhhhcC--CCCCChhHHHHHHHH
Q 000503 1296 LRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-DDLKIWSVLEKCHVKEEVEAVGLETFVKES--GISFSVGQRQLICLA 1369 (1459)
Q Consensus 1296 lR~~i~~VpQdp~lf~gTIReNLdp~~~---~-~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~--G~~LSgGQrQrl~LA 1369 (1459)
+|++++|+||++.+|..|++||+.+... . .+++.. ..+.+.++.+|++...... +.+||||||||++||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la 153 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELD-----ERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLA 153 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHH-----HHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHH
Confidence 8889999999999998899999975321 1 111111 1122334444665544444 468999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHH
Q 000503 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1442 (1459)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1442 (1459)
||++++|++|||||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 154 RALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 9999999999999999999999999999999987656899999999999875 899999999999999998764
No 135
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-40 Score=380.77 Aligned_cols=218 Identities=30% Similarity=0.514 Sum_probs=185.1
Q ss_pred EEEEEEEEEecCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCC--hHHHh
Q 000503 1223 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--VRDLR 1297 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~--~~~lR 1297 (1459)
|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999996432 36999999999999999999999999999999999999999999999999998743 45788
Q ss_pred cccEEEeCCC--cCCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCc--hhhhcCCCCCChhHHHHHHHHH
Q 000503 1298 GRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE--TFVKESGISFSVGQRQLICLAR 1370 (1459)
Q Consensus 1298 ~~i~~VpQdp--~lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLd--t~v~e~G~~LSgGQrQrl~LAR 1370 (1459)
++++||||+| .+|+.|+++|+.+... .++++..+. ..+.++.+|++ ...+.....||||||||++|||
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAr 157 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAG 157 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHH
Confidence 9999999998 5788999999975321 233322211 12333444665 4456667789999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1371 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1371 ALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
||+.+|+||||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|++++++++
T Consensus 158 aL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 158 VVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 99999999999999999999999999999988643 7899999999999865 899999999999999999998763
No 136
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-40 Score=372.25 Aligned_cols=219 Identities=26% Similarity=0.430 Sum_probs=187.3
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC---CCCceEEECCEeCCCCChHHHhc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLRG 1298 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR~ 1298 (1459)
.|+++|++++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.+.+...+|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 3789999999963 469999999999999999999999999999999999985 68999999999999888888899
Q ss_pred ccEEEeCCCcCCCccHHHhcCcCCCC---------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000503 1299 RFAVVPQSPFLFEGSLRDNLDPFHMN---------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1459)
Q Consensus 1299 ~i~~VpQdp~lf~gTIReNLdp~~~~---------~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LA 1369 (1459)
+++|+||+|.+|+.|+++|+.+.... .++++.++++.+++.+.+ .....+.+.+||||||||++||
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv~la 154 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-----KDKLKQNALALSGGQQQRLCIA 154 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-----hHHhcCCcccCCHHHHHHHHHH
Confidence 99999999999999999999754211 111233344444332221 1234566778999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000503 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1447 (1459)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1447 (1459)
||++++|+++||||||++||.++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 155 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 233 (246)
T PRK14269 155 RALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENPK 233 (246)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCCC
Confidence 9999999999999999999999999999999887678999999999998875 89999999999999999999987553
No 137
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-40 Score=378.79 Aligned_cols=219 Identities=28% Similarity=0.446 Sum_probs=187.4
Q ss_pred cEEEEEEEEEecCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1222 LIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
.++++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999643 24699999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEeCCC--cCCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1301 AVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1301 ~~VpQdp--~lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
+|+||+| .++..|+++|+.+... .+.++..+ ...+.++.+|++........+||||||||++|||||+++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~ 158 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKE-----RVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMR 158 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 9999998 3566799999975421 22222111 122334444666556666678999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhcc
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||||++|++|++++.|+++++.++
T Consensus 159 p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 159 PKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999987643 7999999999999988999999999999999999998765
No 138
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.6e-40 Score=373.02 Aligned_cols=222 Identities=26% Similarity=0.442 Sum_probs=187.7
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1301 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1301 (1459)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999963 369999999999999999999999999999999999999999999999999988876554 57799
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCCC-ChHHH-------HHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHMN-DDLKI-------WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~~-~d~ei-------~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1459)
|+||+|.+|++ |+++|+...... ....+ ...-......+.++.+|++...+.....||||||||++||||+
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 158 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIARAL 158 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHHHH
Confidence 99999999987 999998643211 00000 0000112234556666887777777788999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
+++|++|||||||++||..+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++
T Consensus 159 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 234 (236)
T cd03219 159 ATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNNP 234 (236)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccCC
Confidence 99999999999999999999999999998764 68999999999999976 8999999999999999999997643
No 139
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.1e-40 Score=355.30 Aligned_cols=208 Identities=30% Similarity=0.421 Sum_probs=173.6
Q ss_pred EEEEEEEEEecCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh---HHHh
Q 000503 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLR 1297 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR 1297 (1459)
++++||+..|..+. ..+|+++||+|++||.|+|+||||||||||+++|-++..|++|.|.++|.|+..++- ..+|
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999997543 368999999999999999999999999999999999999999999999999999884 4444
Q ss_pred -cccEEEeCCCcCCCc-cHHHhcCc---CCCCChHHHHHHHHHhcHHHHHHhCCCchhhh-cCCCCCChhHHHHHHHHHH
Q 000503 1298 -GRFAVVPQSPFLFEG-SLRDNLDP---FHMNDDLKIWSVLEKCHVKEEVEAVGLETFVK-ESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1298 -~~i~~VpQdp~lf~g-TIReNLdp---~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~-e~G~~LSgGQrQrl~LARA 1371 (1459)
++||+|+|+..|++. |++||+.. +......+..++ ..+..+.+|+..... .....||||||||+|||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~-----~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARA 156 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRA-----AEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARA 156 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHH-----HHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHH
Confidence 569999999999876 99999863 222221111111 122333346665544 5577899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEEE
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVE 1435 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE 1435 (1459)
|+.+|+|++.||||++||.+|.+.|.+.+++.. .++|+|+|||+.+....|||++.|.+|++.+
T Consensus 157 L~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 157 LINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999998874 3789999999999999999999999999543
No 140
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-40 Score=386.41 Aligned_cols=222 Identities=29% Similarity=0.434 Sum_probs=189.2
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
..|+++|++++|.. ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.+.+ |+++
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 46999999999963 4599999999999999999999999999999999999999999999999999887753 5789
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
++|+|++.+|+. |++||+.+.-. .+++++.+. +.+.++.+|++.........||||||||++|||||+++|
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~-----v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P 155 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQR-----VKEALELVDLAGFEDRYVDQISGGQQQRVALARALILKP 155 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHH-----HHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999999999986 99999975421 222222211 122333335555555666789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1451 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1451 (1459)
+|||||||||+||..+.+.+++.|++..+ ++|+|+|||+.+.+.. ||||+||++|+|++.|+|+++.+++...|.
T Consensus 156 ~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~~~~ 233 (351)
T PRK11432 156 KVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPASRFM 233 (351)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCchHH
Confidence 99999999999999999999999987754 7999999999999865 899999999999999999999988876553
No 141
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-40 Score=388.36 Aligned_cols=222 Identities=23% Similarity=0.352 Sum_probs=189.1
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++|++++|+.+ ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ +++++
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 38999999999422 4699999999999999999999999999999999999999999999999999988764 47899
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
||||++.+|+. |++||+.+... .+..+..+ ...+.++.+|++...+....+||||||||++|||||+++|+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~ 154 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEE-----RVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPA 154 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999975 99999975422 22222211 12233444466666666677899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1451 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1451 (1459)
|||||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++...|.
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~~~~ 231 (356)
T PRK11650 155 VFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPASTFV 231 (356)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCccHHH
Confidence 9999999999999999999999987653 7899999999998865 899999999999999999999988765554
No 142
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-40 Score=348.19 Aligned_cols=220 Identities=28% Similarity=0.415 Sum_probs=189.0
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCC---hHHHhc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDLRG 1298 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---~~~lR~ 1298 (1459)
.|+++||+.+|+ +...+|+||||+|++||.|+|+|+||||||||+++|.|+.+|++|+|.++|.++...+ ++.+|+
T Consensus 3 ~i~~~nl~k~yp-~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYP-GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecC-CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 489999999997 4567999999999999999999999999999999999999999999999999998887 677789
Q ss_pred ccEEEeCCCcCCCc-cHHHhcCcC------------CCCChH---HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhH
Q 000503 1299 RFAVVPQSPFLFEG-SLRDNLDPF------------HMNDDL---KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1362 (1459)
Q Consensus 1299 ~i~~VpQdp~lf~g-TIReNLdp~------------~~~~d~---ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQ 1362 (1459)
++|+|+|++-|-+- |+-+|+..+ +-++.+ +..++|+++|+.+. .-.+..+|||||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~---------A~qra~~LSGGQ 152 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK---------AYQRASTLSGGQ 152 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH---------HHHHhccCCcch
Confidence 99999999998875 899997432 233333 34556666665543 333455799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecCh
Q 000503 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1439 (1459)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1439 (1459)
+||++|||||.++|+|++=|||+|+||+++.+.+++.|++.. .|.|||+.-|.++..++ ||||+-|++|+|+..|++
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 999999999999999999999999999999999999998764 58999999999999987 799999999999999999
Q ss_pred hHHhccCCcHHHHHH
Q 000503 1440 QTLLQDECSVFSSFV 1454 (1459)
Q Consensus 1440 ~eLl~~~~~~f~~l~ 1454 (1459)
+||-+ ..+.+.|
T Consensus 233 ~el~~---~~~~~iY 244 (258)
T COG3638 233 SELTD---EALDEIY 244 (258)
T ss_pred hhhhH---HHHHHHh
Confidence 99643 2455544
No 143
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.9e-40 Score=368.62 Aligned_cols=214 Identities=27% Similarity=0.390 Sum_probs=181.3
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++||+++|+....++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+|++++|
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5789999999653246999999999999999999999999999999999999999999999999987643 667889999
Q ss_pred EeCCCcCC-CccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf-~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||+|.+| ..|+++|+.... ....++.. ....+.++.+|++........+||+|||||++||||++++|++
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIK-----EEVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSV 154 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999998 569999986431 11211111 1123344444665555555668999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHH
Q 000503 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1442 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1442 (1459)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 155 LLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999987778999999999999976 899999999999999999875
No 144
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-40 Score=371.95 Aligned_cols=225 Identities=29% Similarity=0.456 Sum_probs=190.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 469999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EeCCCcCCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCch--hhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1303 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLET--FVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1303 VpQdp~lf~-gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt--~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+||+|.+|+ .|++||+..... .+.++. .....+.++.+|++. .....+.+||||||||++||||++++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p 154 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADP 154 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999996 599999964321 111111 122344555567764 566777899999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHH-HH
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF-SS 1452 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f-~~ 1452 (1459)
++|||||||++||+++.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++.+++...+ ..
T Consensus 155 ~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 234 (242)
T cd03295 155 PLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPANDFVAE 234 (242)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCCChHHHH
Confidence 9999999999999999999999998864 37999999999998765 89999999999999999999976544333 44
Q ss_pred H
Q 000503 1453 F 1453 (1459)
Q Consensus 1453 l 1453 (1459)
+
T Consensus 235 ~ 235 (242)
T cd03295 235 F 235 (242)
T ss_pred H
Confidence 4
No 145
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=9.1e-40 Score=386.81 Aligned_cols=221 Identities=28% Similarity=0.421 Sum_probs=192.2
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++|++++|+. ..+|+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ +++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999964 4589999999999999999999999999999999999999999999999999887764 67899
Q ss_pred EEeCCCcCCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1302 VVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1302 ~VpQdp~lf~-gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
||||++.+|+ .|++||+.+... .+..+.. ....+.++.+|++........+||||||||++|||||+++|+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~ 154 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVA-----ERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPG 154 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999997 599999975421 1222221 123445555688777777888999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1451 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1451 (1459)
+|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++...|.
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~~ 231 (353)
T TIGR03265 155 LLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPFV 231 (353)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHHH
Confidence 9999999999999999999999987653 7899999999999765 899999999999999999999998876663
No 146
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-40 Score=379.42 Aligned_cols=218 Identities=28% Similarity=0.433 Sum_probs=187.0
Q ss_pred EEEEEEEEEecCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCC----ChHH
Q 000503 1223 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRD 1295 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~ 1295 (1459)
|+++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996432 3699999999999999999999999999999999999999999999999999754 3457
Q ss_pred HhcccEEEeCCC--cCCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000503 1296 LRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1369 (1459)
Q Consensus 1296 lR~~i~~VpQdp--~lf~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQrl~LA 1369 (1459)
+|++++||||+| .+|+.|+++|+.+.. ..+.++..+ + ..+.++.+||++ ..+..+.+||||||||++||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~---~--~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~la 157 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKN---Y--AHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIV 157 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHH---H--HHHHHHHcCCChhhhhCCcccCCHHHHHHHHHH
Confidence 899999999998 588899999996532 122222222 1 234555668874 45667889999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
|||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 158 raL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 236 (286)
T PRK13646 158 SILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFKD 236 (286)
T ss_pred HHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 99999999999999999999999999999998864 48999999999999865 899999999999999999998864
No 147
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.2e-40 Score=376.80 Aligned_cols=219 Identities=25% Similarity=0.340 Sum_probs=195.8
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|+... .++|+|+||+|++||+++|+|+||||||||+++|.|+++ .+|+|.++|
T Consensus 2 ~i~~~nls~~~~~~~----~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr 76 (275)
T cd03289 2 QMTVKDLTAKYTEGG----NAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWR 76 (275)
T ss_pred eEEEEEEEEEeCCCC----CcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHh
Confidence 478999999996321 236999999999999999999999999999999999998 799999987
Q ss_pred -cEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccC
Q 000503 673 -SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 751 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 751 (1459)
.|+||||+|++|++|++||+....++++++..++++.++|+..+..+|++++|.++++|.+||||||||++||||++++
T Consensus 77 ~~i~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~ 156 (275)
T cd03289 77 KAFGVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSK 156 (275)
T ss_pred hhEEEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999964445677888999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhccccCccc
Q 000503 752 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWS 830 (1459)
Q Consensus 752 ~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 830 (1459)
|+|+||||||++||+.+.+.+.+. +.. ..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+....+..+
T Consensus 157 p~illlDEpts~LD~~~~~~l~~~-l~~-~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~ 233 (275)
T cd03289 157 AKILLLDEPSAHLDPITYQVIRKT-LKQ-AFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQA 233 (275)
T ss_pred CCEEEEECccccCCHHHHHHHHHH-HHH-hcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHH
Confidence 999999999999999998877765 443 34578999999999999899999999999999999999998765444433
No 148
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-37 Score=342.46 Aligned_cols=473 Identities=19% Similarity=0.247 Sum_probs=326.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccChhhHHHHHhhhhhhhhchhhHHHHHH
Q 000503 941 YLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNIL 1020 (1459)
Q Consensus 941 ~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnrfs~D~~~id~~l~~~l~~~ 1020 (1459)
++..+.++..+..+...+........+...-.+++.++.++++.+|+.-+++...++++.++++|+..|.-.+ ..+..+
T Consensus 50 ~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~-s~lp~~ 128 (546)
T COG4615 50 VLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAF-SRLPEL 128 (546)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehH-hhhHHH
Confidence 3333444444444455555666778888999999999999999999999999999999999999999998332 233445
Q ss_pred HHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHH-
Q 000503 1021 LANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDY- 1099 (1459)
Q Consensus 1021 ~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~- 1099 (1459)
.......++..+.+++.+|.+..+.+..+++..+.+.+.++..-+--+...+....++++++..++|-+..+..+-..+
T Consensus 129 ~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~ 208 (546)
T COG4615 129 VQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEY 208 (546)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHH
Confidence 6666677778888888888766655544444333222211111111111223345688999999999999887754333
Q ss_pred -HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHH
Q 000503 1100 -FMAKFKEHVVLYQR----TSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVS 1174 (1459)
Q Consensus 1100 -~~~~~~~~~~~~~~----~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~ 1174 (1459)
+.+.+...-....+ ..........|.++.+-. ++..+..++.. .... +...........+.+-+
T Consensus 209 ~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~----lIGlvf~lal~---~~w~----st~~a~tivlvlLflr~ 277 (546)
T COG4615 209 VHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLG----LIGLVFWLALS---LGWA----STNVAATIVLVLLFLRT 277 (546)
T ss_pred HHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHH----HHHHHHHHHHh---hccc----hhhHHHHHHHHHHHHhh
Confidence 23333221111111 111111233444332211 11111111110 0111 11111111122233456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEE
Q 000503 1175 LLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVG 1254 (1459)
Q Consensus 1175 ~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~Gekvg 1254 (1459)
++.+++..+..+-++.++.+++.++...|+.+.-....+.|+| ..|+++||.|.|.+.. --+..||++|+.||.|-
T Consensus 278 pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelvF 353 (546)
T COG4615 278 PLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFPRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELVF 353 (546)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEEE
Confidence 7888888888899999999999998764443322222333445 4699999999997653 45788999999999999
Q ss_pred EECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHH
Q 000503 1255 IVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLE 1334 (1459)
Q Consensus 1255 IvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~ 1334 (1459)
|+|.|||||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|.-|-+||+.++ -+.+..+.+.+..-|+
T Consensus 354 liG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~Lq 429 (546)
T COG4615 354 LIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWLQ 429 (546)
T ss_pred EECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998764 3334456677777777
Q ss_pred HhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHh--cCCcEEEEe
Q 000503 1335 KCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSE--CKGMTVITI 1412 (1459)
Q Consensus 1335 ~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~--~~~~TvI~I 1412 (1459)
+..+.....-. |-... ...||-|||.|+++--|++.+.+|+++||=-+--|+.=.+...+.+-.. .+||||+.|
T Consensus 430 rLel~~ktsl~--d~~fs--~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aI 505 (546)
T COG4615 430 RLELAHKTSLN--DGRFS--NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAI 505 (546)
T ss_pred HHHHhhhhccc--CCccc--ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEE
Confidence 66554432211 11111 1259999999999999999999999999999999999999887776433 359999999
Q ss_pred ccChhhHhhcCEEEEEeCCeEEEec
Q 000503 1413 AHRISTVLNMDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1413 aHrl~ti~~~DrIlVl~~G~IvE~G 1437 (1459)
||+-.....+||++.|++|+++|.-
T Consensus 506 sHDd~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 506 SHDDHYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred ecCchhhhhHHHHHHHhcCceeecc
Confidence 9999999999999999999999863
No 149
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.5e-40 Score=369.96 Aligned_cols=216 Identities=28% Similarity=0.393 Sum_probs=183.8
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999876653 3678999
Q ss_pred EeCCCcCCC-ccHHHhcCcCCCC-------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1303 VPQSPFLFE-GSLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1303 VpQdp~lf~-gTIReNLdp~~~~-------~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
+||+|.+|+ .|+++|+.+.... +..+.. ..+.+.++.+|++........+||+|||||++|||||++
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~ 153 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAV 153 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 999999986 5999999753211 111111 122344555577666666677899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1447 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1447 (1459)
+|++|||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 154 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 229 (239)
T cd03296 154 EPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDHPA 229 (239)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcCCC
Confidence 9999999999999999999999999987643 7899999999998765 89999999999999999999986543
No 150
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=373.85 Aligned_cols=221 Identities=28% Similarity=0.405 Sum_probs=187.8
Q ss_pred CccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCC--CC
Q 000503 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TP 1292 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~ 1292 (1459)
++.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 567999999999964 369999999999999999999999999999999999986 589999999999863 45
Q ss_pred hHHHhcccEEEeCCCcCCCccHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000503 1293 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1459)
Q Consensus 1293 ~~~lR~~i~~VpQdp~lf~gTIReNLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQ 1364 (1459)
...+|++++|+||+|.+|+.|+++|+.+.. ..+. ++++++++.+++.+. +....++...+|||||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~q 163 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNE-----VKDKLHQSGYSLSGGQQQ 163 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChh-----hHHHHhcCCCCCCHHHHH
Confidence 667899999999999999999999997531 1222 233444444443221 124456667789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
|++||||++++|+||||||||++||.++.+.+.+.|++..++.|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 164 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 164 RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred HHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987678899999999999865 8999999999999999999998
Q ss_pred ccCC
Q 000503 1444 QDEC 1447 (1459)
Q Consensus 1444 ~~~~ 1447 (1459)
+.+.
T Consensus 244 ~~~~ 247 (260)
T PRK10744 244 TKPA 247 (260)
T ss_pred hCCC
Confidence 7543
No 151
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.1e-39 Score=371.17 Aligned_cols=221 Identities=29% Similarity=0.437 Sum_probs=186.8
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCC-----CceEEECCEeCCCC--ChHH
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIINT--PVRD 1295 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~i--~~~~ 1295 (1459)
++++||+++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGE--KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECC--eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 789999999964 35999999999999999999999999999999999999998 99999999999763 4567
Q ss_pred HhcccEEEeCCCcCCCccHHHhcCcCC---C-CChHHHHHHHHHhcHHHHHHhCCCc----hhhhcCCCCCChhHHHHHH
Q 000503 1296 LRGRFAVVPQSPFLFEGSLRDNLDPFH---M-NDDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQLIC 1367 (1459)
Q Consensus 1296 lR~~i~~VpQdp~lf~gTIReNLdp~~---~-~~d~ei~~aL~~~~l~~~i~~lGLd----t~v~e~G~~LSgGQrQrl~ 1367 (1459)
.|++++|+||++.+|+.|+++|+.+.. . .+.++..+ ...+.++.+|++ ...+....+||||||||++
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~ 154 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDE-----IVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLC 154 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHH
Confidence 788999999999999999999996421 1 11111111 122334444555 4556667789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
|||||+++|+++||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++
T Consensus 155 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 234 (247)
T TIGR00972 155 IARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFTNP 234 (247)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCC
Confidence 999999999999999999999999999999999987667899999999999876 8999999999999999999998765
Q ss_pred CcHH
Q 000503 1447 CSVF 1450 (1459)
Q Consensus 1447 ~~~f 1450 (1459)
...+
T Consensus 235 ~~~~ 238 (247)
T TIGR00972 235 KEKR 238 (247)
T ss_pred CChH
Confidence 5444
No 152
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=7.3e-40 Score=367.06 Aligned_cols=215 Identities=26% Similarity=0.423 Sum_probs=182.2
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1301 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1301 (1459)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999964 369999999999999999999999999999999999999999999999999988876654 67899
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCCCC-hHHHHHHHHHhcHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHMND-DLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~~~-d~ei~~aL~~~~l~~~i~~l-GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
|+||++.+|++ |+++|+.+..... +.+..+ .+.+.++.+ +++...+.....||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~-----~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 153 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKA-----RLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKL 153 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHH-----HHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999987 9999996542211 111111 122233333 455555666678999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 154 LLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 99999999999999999999998764 57899999999998876 89999999999999999998764
No 153
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-40 Score=361.50 Aligned_cols=205 Identities=27% Similarity=0.356 Sum_probs=172.3
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
|++++++..|... ......+|+||||+|++|++.+|+|.||+|||||++++.++-.|++|+|.++|
T Consensus 2 I~l~~vsK~~~~~-~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 2 IELENVSKTFGQT-GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred eEEEeeeeeeccC-CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 6788888888753 22334579999999999999999999999999999999999999999999988
Q ss_pred ---cEEEEcCCCCCCC-CCHHHHhccCCCC----CHHHHHHHH---HHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 ---SIAYVPQVPWILS-GTIRDNILFGKNY----DPQSYSETL---KACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~-~ti~~nI~~g~~~----~~~~~~~v~---~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
+||+++|++.|++ .||.|||.|..+. .++...+|. +..+|.+. .+....+||||||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk-----------~~~yP~qLSGGQKQR 149 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDK-----------ADRYPAQLSGGQKQR 149 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhh-----------hccCchhcCcchhhH
Confidence 5999999999997 6999999997432 233444444 44444432 245567999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 820 (1459)
|+|||||..+|+|||.|||||||||+|.+.|++.+..-....|-|+++|||.++.++. |||+.+|++|+++++|+..++
T Consensus 150 VaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 150 VAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred HHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 9999999999999999999999999999999986432223447799999999999997 999999999999999999887
Q ss_pred Hh
Q 000503 821 AV 822 (1459)
Q Consensus 821 ~~ 822 (1459)
-.
T Consensus 230 F~ 231 (339)
T COG1135 230 FA 231 (339)
T ss_pred hc
Confidence 54
No 154
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-40 Score=369.47 Aligned_cols=219 Identities=28% Similarity=0.434 Sum_probs=185.6
Q ss_pred EEEEEEEEEecCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHh
Q 000503 1223 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1297 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1297 (1459)
|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999643 12699999999999999999999999999999999999999999999999999877654 347
Q ss_pred cccEEEeCCCcCCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1298 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1298 ~~i~~VpQdp~lf~-gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
++++|+||+|.+|+ .|++||+.... ..+..+. .....+.++.+|++........+||||||||++||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~ 156 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEI-----EERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALA 156 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHh
Confidence 89999999999997 59999986421 1111111 112234455557766666677789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
++|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||++++|++|++++.|+++++.+++
T Consensus 157 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 232 (233)
T cd03258 157 NNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFANP 232 (233)
T ss_pred cCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCC
Confidence 9999999999999999999999999998864 27899999999999876 8999999999999999999987643
No 155
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=372.43 Aligned_cols=223 Identities=26% Similarity=0.392 Sum_probs=187.8
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCC--CChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~~ 1294 (1459)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 6999999999964 4699999999999999999999999999999999999997 48999999999863 3456
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCCC----CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~~----~~----d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
.+|++++|+||+|.+|+.|++||+.+... .+ ++++.++++.+++.+.+ +........+||||||||+
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgG~~qrv 159 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV-----KDKLNTNALSLSGGQQQRL 159 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh-----HHHHhCCcccCCHHHHHHH
Confidence 77899999999999999999999965321 11 23344555555543222 2233445678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+|||||+++|++|||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 160 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 239 (254)
T PRK14273 160 CIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFFN 239 (254)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988778999999999999866 899999999999999999999876
Q ss_pred CCcHHH
Q 000503 1446 ECSVFS 1451 (1459)
Q Consensus 1446 ~~~~f~ 1451 (1459)
+.-.|.
T Consensus 240 ~~~~~~ 245 (254)
T PRK14273 240 PKNTKT 245 (254)
T ss_pred CCChHH
Confidence 554333
No 156
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=377.15 Aligned_cols=218 Identities=29% Similarity=0.460 Sum_probs=184.8
Q ss_pred EEEEEEEEEecCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCC----CChHH
Q 000503 1223 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----TPVRD 1295 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~----i~~~~ 1295 (1459)
|+++||+++|+++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997432 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcccEEEeCCC--cCCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000503 1296 LRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1369 (1459)
Q Consensus 1296 lR~~i~~VpQdp--~lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQrQrl~LA 1369 (1459)
+|++++||+|+| .+|+.|+++|+.+... .+.+++.+ ...+.++.+|++ ........+||||||||++||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA 156 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIA 156 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCCChhhccCCcccCCHHHHHHHHHH
Confidence 899999999998 7899999999965321 22222211 123344445664 345666778999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
|||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+|+++.++
T Consensus 157 ~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 157 GILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99999999999999999999999999999998764 48899999999998865 999999999999999999998764
No 157
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.1e-40 Score=333.59 Aligned_cols=207 Identities=29% Similarity=0.382 Sum_probs=180.8
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHhcc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1299 (1459)
|+|+||+.+|+.+ +++|+||||+|++||.+-++|||||||||++++|++...|++|+|.++|.|+++++.+ -||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7999999999876 7899999999999999999999999999999999999999999999999999988754 58999
Q ss_pred cEEEeCCCcCCCc-cHHHhcCcCC---CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1300 FAVVPQSPFLFEG-SLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1300 i~~VpQdp~lf~g-TIReNLdp~~---~~~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
||+|.||--|... |+.||+.+-- ..+. +++.++|+.+||.+ ....-...|||||+||+|||||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~---------k~~~lP~~LSGGEQQRvaIARA 151 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKH---------KARALPSQLSGGEQQRVAIARA 151 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccch---------hhhcCccccCchHHHHHHHHHH
Confidence 9999999988865 9999986431 1222 34555666665544 4445566899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhc-CEEEEEeCCeEEEecCh
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNM-DEILILDHGHLVEQGNP 1439 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~~-DrIlVl~~G~IvE~G~p 1439 (1459)
+..+|++||=||||-|||+++...|++.+.+.. .|.||++.||+.+.+.++ -|++.+++|+++....+
T Consensus 152 iV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 152 IVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999998764 599999999999999987 78999999999977654
No 158
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=9.7e-40 Score=385.40 Aligned_cols=209 Identities=26% Similarity=0.386 Sum_probs=180.4
Q ss_pred CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH----hcccEEEeCCCcCCCc
Q 000503 1237 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGRFAVVPQSPFLFEG 1312 (1459)
Q Consensus 1237 ~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~i~~VpQdp~lf~g 1312 (1459)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.|+...+...+ |++++||||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999999998887 7899999999999985
Q ss_pred -cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCC
Q 000503 1313 -SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANV 1388 (1459)
Q Consensus 1313 -TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~l 1388 (1459)
|+++|+.+... .+.++..+ ...+.++.+||+...+....+||||||||++|||||+++|+|||||||||+|
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saL 160 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSAL 160 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99999964321 12222211 1223344447777777788899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000503 1389 DAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1450 (1459)
Q Consensus 1389 D~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1450 (1459)
|+.+.+.+++.+++.. .++|+|+|||+++.+.. ||||++|++|++++.|+|+++++++...|
T Consensus 161 D~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 161 DPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 9999999999998764 37999999999998755 89999999999999999999998765444
No 159
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.3e-39 Score=365.80 Aligned_cols=215 Identities=35% Similarity=0.525 Sum_probs=194.0
Q ss_pred CCccEEEEEEEEEecCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHh
Q 000503 1219 FQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLR 1297 (1459)
Q Consensus 1219 ~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR 1297 (1459)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 35789999999999643 24699999999999999999999999999999999999999999999999999888888888
Q ss_pred cccEEEeCCCcCCCccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1298 GRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1298 ~~i~~VpQdp~lf~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
++++|+||+|.+|++|+++|+++... ....++++..++.++.+.++.+ |+++.+++...+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999986432 2334555566667788888888 89988898899999999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeE
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHL 1433 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~I 1433 (1459)
+|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987778999999999999988999999999975
No 160
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=373.92 Aligned_cols=220 Identities=25% Similarity=0.468 Sum_probs=189.9
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 48999999999644457999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEeCCC--cCCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1302 VVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1302 ~VpQdp--~lf~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
|+||+| .++..|+++|+.+.. ..++++..+ .+.+.++.+|++........+||||||||++|||||+++|
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNP 161 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 455679999997531 122222221 1233445557776677777899999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccC
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
++|||||||++||..+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+++
T Consensus 162 ~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 233 (271)
T PRK13632 162 EIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNNK 233 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcCH
Confidence 99999999999999999999999988643 48999999999998889999999999999999999987643
No 161
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=371.36 Aligned_cols=219 Identities=28% Similarity=0.422 Sum_probs=185.4
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCC--CChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1294 (1459)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 359999999999999999999999999999999999975 589999999999875 3455
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCC----CCC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~----~~~----d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
.+|++++|+||++.+|++|+++|+.+.. ... ++++.++++.+++.+.+ +...+....+||||||||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq~qrv 158 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-----KDRLHESALGLSGGQQQRL 158 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-----hHHhhCCcccCCHHHHHHH
Confidence 7789999999999999999999996431 111 22344444444443221 2234566678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||++++|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 238 (253)
T PRK14242 159 CIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIFTR 238 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 9999999999999999999999999999999999987667899999999999865 899999999999999999999876
Q ss_pred CC
Q 000503 1446 EC 1447 (1459)
Q Consensus 1446 ~~ 1447 (1459)
+.
T Consensus 239 ~~ 240 (253)
T PRK14242 239 PR 240 (253)
T ss_pred CC
Confidence 54
No 162
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.8e-39 Score=367.01 Aligned_cols=215 Identities=27% Similarity=0.422 Sum_probs=185.7
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.+. +++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 689999999963 46999999999999999999999999999999999999999999999999998776544 458999
Q ss_pred EeCCCcCC-CccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLF-EGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf-~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||++.++ ..|+++|+..... .+.++.. ....+.++.+|++...+....+||||||||++||||++++|+|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~l 153 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPAL 153 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999874 5799999965321 1111111 1234455556887777777789999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhcc
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||||++||+++.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 154 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 154 LLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred EEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999998865 47899999999999988999999999999999999999865
No 163
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-39 Score=372.70 Aligned_cols=223 Identities=25% Similarity=0.390 Sum_probs=188.6
Q ss_pred CCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCC--
Q 000503 1218 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN-- 1290 (1459)
Q Consensus 1218 p~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~-- 1290 (1459)
|....|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++..
T Consensus 9 ~~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 9 SKNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CCCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 33457999999999964 359999999999999999999999999999999999987 689999999999863
Q ss_pred CChHHHhcccEEEeCCCcCCCccHHHhcCcCCC---CC---hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000503 1291 TPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1459)
Q Consensus 1291 i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~---~~---d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQ 1364 (1459)
.+...+|++++|+||+|.+|+.|++||+.+... .. ++++.++++.++++. +++.........||+||||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-----ECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-----hhhhhhCCCcccCCHHHHH
Confidence 566778899999999999999999999975422 11 233444555554432 2233455566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeC-----------Ce
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-----------GH 1432 (1459)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~-----------G~ 1432 (1459)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.+ ||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999987668899999999998865 899999996 67
Q ss_pred EEEecChhHHhccCC
Q 000503 1433 LVEQGNPQTLLQDEC 1447 (1459)
Q Consensus 1433 IvE~G~p~eLl~~~~ 1447 (1459)
++|.|+++++++++.
T Consensus 242 ~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 242 LVEFNETKKIFNSPK 256 (269)
T ss_pred EEEeCCHHHHHhCcC
Confidence 999999999987553
No 164
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-39 Score=369.28 Aligned_cols=215 Identities=30% Similarity=0.428 Sum_probs=183.9
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCC---hHHHhcc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDLRGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---~~~lR~~ 1299 (1459)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 46999999999999999999999999999999999999999999999999998876 4567889
Q ss_pred cEEEeCCCcCCC-ccHHHhcCcCCC------------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1300 FAVVPQSPFLFE-GSLRDNLDPFHM------------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1300 i~~VpQdp~lf~-gTIReNLdp~~~------------~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
++|+||++.+|. .|+++|+.+... .+++ ......+.++.+|++...+..+..||||||||+
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv 153 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKE------EKQRALAALERVGLLDKAYQRADQLSGGQQQRV 153 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHH------HHHHHHHHHHHcCChhhhCCCcccCCHHHHHHH
Confidence 999999999887 699999964211 1111 011123344555776666777789999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
+||||++++|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 154 AIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999999998864 37999999999999985 8999999999999999999974
Q ss_pred c
Q 000503 1444 Q 1444 (1459)
Q Consensus 1444 ~ 1444 (1459)
+
T Consensus 234 ~ 234 (241)
T cd03256 234 D 234 (241)
T ss_pred H
Confidence 3
No 165
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=373.59 Aligned_cols=216 Identities=25% Similarity=0.406 Sum_probs=182.8
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999633 46999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCC--cCCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1302 VVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1302 ~VpQdp--~lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
|+||+| .++..|+++|+.+... .+.++..+ .+.+.++.+|+..........||||||||++|||||+++|
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p 157 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVER-----RVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDP 157 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999998 6788999999975321 12111111 1122333335544445555689999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 158 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 158 DVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred CEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999998764 47999999999999865 8999999999999999997653
No 166
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.2e-39 Score=382.14 Aligned_cols=220 Identities=24% Similarity=0.375 Sum_probs=187.7
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 3889999999964 359999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCC-------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~-------~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
||||++.+|+. |++||+.+... .+.++..+ ...+.++.+|++.........||||||||++|||||+
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~ 152 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALA 152 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHh
Confidence 99999999985 99999975421 12222111 1233444446665566667789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1450 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1450 (1459)
++|++||||||||+||..+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++...|
T Consensus 153 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~~~~ 232 (353)
T PRK10851 153 VEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPATRF 232 (353)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccchH
Confidence 99999999999999999999999999988654 7899999999999776 89999999999999999999998776544
No 167
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-39 Score=373.78 Aligned_cols=219 Identities=25% Similarity=0.459 Sum_probs=188.4
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.++++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999654456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCC--cCCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1302 VVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1302 ~VpQdp--~lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
|+||+| .+++.|+++|+.+... .+.++..+ ...+.++.+||+..+......||||||||++|||||+.+|
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVE-----RVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQP 159 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHH-----HHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 4667899999975321 12222111 1223333446665566666789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhcc
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|+++++.+.
T Consensus 160 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 160 DIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999988753 7899999999999988999999999999999999998764
No 168
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-39 Score=374.25 Aligned_cols=218 Identities=28% Similarity=0.437 Sum_probs=186.4
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCC--CCChHHHhcc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--NTPVRDLRGR 1299 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~--~i~~~~lR~~ 1299 (1459)
.|+++||+++|++ ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|++
T Consensus 5 ~l~~~~l~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSD-GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 4899999999963 246999999999999999999999999999999999999999999999999984 3445678899
Q ss_pred cEEEeCCC--cCCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1300 FAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1300 i~~VpQdp--~lf~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
++|+||+| .+|+.|+++|+.+.. ..+.++.++. ..+.++.+|++........+||||||||++|||||+.
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~ 158 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVM 158 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999998 578899999996531 1232222221 2233444566666667778999999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hcCEEEEEeCCeEEEecChhHHhcc
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 159 ~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 159 EPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999988753 799999999999997 4999999999999999999999864
No 169
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.8e-39 Score=368.90 Aligned_cols=220 Identities=30% Similarity=0.397 Sum_probs=182.7
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh---HHHhcc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1299 (1459)
|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~-~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPN-GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCC-CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 689999999962 2469999999999999999999999999999999999999999999999999987654 346889
Q ss_pred cEEEeCCCcCCC-ccHHHhcCcCCCCCh---HHHH---HHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000503 1300 FAVVPQSPFLFE-GSLRDNLDPFHMNDD---LKIW---SVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1459)
Q Consensus 1300 i~~VpQdp~lf~-gTIReNLdp~~~~~d---~ei~---~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1459)
++|+||++.+|+ .|+++|+........ ..+. ..-++....+.++.+|++........+||||||||++|||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 160 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVAIARAL 160 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHH
Confidence 999999999887 599999964211000 0000 000111223444555776666777788999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 161 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 161 AQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 99999999999999999999999999998864 37899999999999865 8999999999999999999974
No 170
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.7e-39 Score=379.10 Aligned_cols=217 Identities=28% Similarity=0.410 Sum_probs=184.7
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
..|+++|++++|++ ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|+++
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999964 46999999999999999999999999999999999999999999999999998755 4578999
Q ss_pred EEEeCCCcCCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1301 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1301 ~~VpQdp~lf~-gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+|+||+|.+|. .|++||+.++.. .++.+..+ ...+.++.+|+.........+||+|||||++|||||+.+|
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P 157 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARA-----LVPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDP 157 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCC
Confidence 99999999986 599999975332 12222211 1223344445554444455579999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
++|+|||||++||+.+.+.+++.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 158 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 158 DVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999998874 47899999999999976 999999999999999999999764
No 171
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-39 Score=363.70 Aligned_cols=212 Identities=25% Similarity=0.399 Sum_probs=180.8
Q ss_pred cEEEEEEEEEecCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH---H
Q 000503 1222 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---L 1296 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---l 1296 (1459)
.++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997432 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cccEEEeCCCcCCCc-cHHHhcCcC---CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1297 R-GRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1297 R-~~i~~VpQdp~lf~g-TIReNLdp~---~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
| ++++|+||+|.+|++ |+++|+.+. .....++.. ..+.+.++.+|++........+||||||||++||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~a 159 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN-----SRALEMLAAVGLEHRANHRPSELSGGERQRVAIARA 159 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHH
Confidence 3 679999999999876 999998642 111222111 122344555577766677777899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEEEecC
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQGN 1438 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~ 1438 (1459)
++++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+..+|++++|++|++++.|+
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 160 LVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999998863 4799999999999999999999999999998775
No 172
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=370.71 Aligned_cols=224 Identities=24% Similarity=0.337 Sum_probs=186.0
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCC--CCChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII--NTPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~--~i~~~ 1294 (1459)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 4699999999999999999999999999999999999987 4999999999997 45566
Q ss_pred HHhcccEEEeCCCcCCCc-cHHHhcCcCC---CC--Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---MN--DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~g-TIReNLdp~~---~~--~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQ 1364 (1459)
.+|++++|+||+|.+|++ |+++|+.... .. .. +++.++++..++.+.+ .........+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~q 156 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEV-----KDRLNDYPSNLSGGQRQ 156 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccch-----hhhhccChhhCCHHHHH
Confidence 788999999999999976 9999996421 10 11 2233334433332111 12345566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
|++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 157 RLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999876 8999999999999999999998
Q ss_pred ccCCcHHHH
Q 000503 1444 QDECSVFSS 1452 (1459)
Q Consensus 1444 ~~~~~~f~~ 1452 (1459)
+++...+.+
T Consensus 237 ~~~~~~~~~ 245 (253)
T PRK14267 237 ENPEHELTE 245 (253)
T ss_pred hCCCcHHHH
Confidence 765433433
No 173
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.8e-36 Score=365.63 Aligned_cols=492 Identities=19% Similarity=0.195 Sum_probs=338.3
Q ss_pred HHhhhhhhhhhhccccCCC---CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Q 000503 914 SRNGNDLWLSYWVDTTGSS---QTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFF 990 (1459)
Q Consensus 914 ~~~~~~~wl~~w~~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff 990 (1459)
.....++|+..|.....+. .........+.+|.+++.+...+...+.++......+.-..+-+.++++.+...-.|+
T Consensus 58 ~~v~~~v~~~~w~~~~~~aL~~~d~~~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~ 137 (604)
T COG4178 58 LSVRGQVLLNDWNGPFYNALARRDLAAFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYR 137 (604)
T ss_pred HHhheeeeeHhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence 3344566777775432110 0011122335677777777777777888888888899989999999999988774443
Q ss_pred cccCh-----hhHHHHHhhhhhhhhchhhHHHHHHHHHHHhHHHhhhHHHH--------------HHH----HHHHHHHH
Q 000503 991 DQTPG-----GRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSY--------------VQV----FFLLLLVP 1047 (1459)
Q Consensus 991 ~~~~~-----G~ilnrfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~--------------~~~----~~~~~~~p 1047 (1459)
..... -+.=+|+.+|+...-+..-.....++.+++.++...+++.- ..| |++++.++
T Consensus 138 l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~ 217 (604)
T COG4178 138 LAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAI 217 (604)
T ss_pred HHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHH
Confidence 33221 23457999998876654444444444444444433332221 111 11112222
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 1048 FW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1126 (1459)
Q Consensus 1048 l~-~~~~~~~~~y~~~sr~l~~l~~~~~spl~~~~~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~ 1126 (1459)
+. .+..++.+...+..-+..+.|..-|. .+.-.-+....|-.|+-|+...++..+..+.-.+.+......+.+++
T Consensus 218 ~~s~~~~~iGr~Li~LN~~~~~~EA~fR~----~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~ 293 (604)
T COG4178 218 SASLLTHLIGRPLIRLNFERQKLEADFRY----SLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLT 293 (604)
T ss_pred HHHHHHHHHccccccccHHHHHHHHHHHH----HHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 21 12234445444544455555554443 33445567788889999988877777766666665555555555444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC----
Q 000503 1127 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV---- 1202 (1459)
Q Consensus 1127 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~---- 1202 (1459)
..-...+-+.+.+-.+.+ ......+..+.|.++.+.....++...++|++..+.++.+-...+.|+.++.+.
T Consensus 294 ~~~~gy~~~s~v~P~li~----ap~~f~g~i~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~ 369 (604)
T COG4178 294 WFQLGYGWLSVVLPILIA----APRYFSGQITFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAA 369 (604)
T ss_pred HhhhhhhHHHHHHHHHhc----cHhhhcCcChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 433332222221111111 011123456778888888888889999999999999999999999999998732
Q ss_pred --CccccccCC-CCCCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCc
Q 000503 1203 --PQEELCGYQ-SLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1279 (1459)
Q Consensus 1203 --~~e~~~~~~-~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G 1279 (1459)
+++...... .....-..+..|+|+|++..-+++. ..++++||+|+|||.+-|.|+||||||||+++|.|+.+--+|
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G 448 (604)
T COG4178 370 QMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSG 448 (604)
T ss_pred cCcccccCcccccccccccccceeEEeeeeEECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCC
Confidence 222111100 0000000147899999999987654 689999999999999999999999999999999999999999
Q ss_pred eEEECCEeCCCCChHHHhcccEEEeCCCcCCCccHHHhcCc-CCC--CChHHHHHHHHHhcHHHHHHhC-CCchhhhcCC
Q 000503 1280 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDP-FHM--NDDLKIWSVLEKCHVKEEVEAV-GLETFVKESG 1355 (1459)
Q Consensus 1280 ~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp-~~~--~~d~ei~~aL~~~~l~~~i~~l-GLdt~v~e~G 1355 (1459)
+|..-. -+++-++||.|.+-.||+||-|.+ ... ++|+|+.++|.+|+|.+.++++ +.+.. .
T Consensus 449 ~I~~P~-----------~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~~W----~ 513 (604)
T COG4178 449 RISMPA-----------DSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEEDRW----D 513 (604)
T ss_pred ceecCC-----------CCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccCcH----h
Confidence 986631 235899999999999999999853 332 6899999999999999999987 44442 2
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEe
Q 000503 1356 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILD 1429 (1459)
Q Consensus 1356 ~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~ 1429 (1459)
.-||+|||||+++||.+|++|++++||||||+||.+++..+.+.++++..++|||.|+||.....-.++.+-++
T Consensus 514 ~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 514 RVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred hhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 35999999999999999999999999999999999999999999999999999999999987777677766654
No 174
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-39 Score=375.84 Aligned_cols=218 Identities=29% Similarity=0.448 Sum_probs=185.0
Q ss_pred EEEEEEEEEecCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCC----CChHH
Q 000503 1223 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----TPVRD 1295 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~----i~~~~ 1295 (1459)
++++|++++|+... .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996432 469999999999999999999999999999999999999999999999999863 34667
Q ss_pred HhcccEEEeCCC--cCCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000503 1296 LRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1369 (1459)
Q Consensus 1296 lR~~i~~VpQdp--~lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQrl~LA 1369 (1459)
.|++++||||+| .+|+.|+++|+.+... .+.++..+ ...+.++.+||+. ........||||||||++||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lA 157 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQ-----KAREMIELVGLPEELLARSPFELSGGQMRRVAIA 157 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHH
Confidence 888999999998 6888899999964321 23332221 1233445557753 34666778999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
|||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 158 raL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 236 (290)
T PRK13634 158 GVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFAD 236 (290)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999988643 7899999999999865 899999999999999999998764
No 175
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.1e-39 Score=384.00 Aligned_cols=222 Identities=25% Similarity=0.409 Sum_probs=191.5
Q ss_pred CccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCC--ceEEECCEeCCCCChHHHh
Q 000503 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG--GQILVDGLNIINTPVRDLR 1297 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~--G~I~IDG~di~~i~~~~lR 1297 (1459)
.|.|+++||+++|+. ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++ |+|.+||.++.+.+. .+
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 467999999999964 369999999999999999999999999999999999999999 999999999987765 35
Q ss_pred cccEEEeCCCcCCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1298 GRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1298 ~~i~~VpQdp~lf~g-TIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
+++++|+|++.+|+. |+++|+.+.- ..+++++.+ ...+.++.+||+...+....+||||||||++|||||+
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~ 153 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIA 153 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHh
Confidence 789999999999987 9999997532 123233222 1233445557777777777899999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC---CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcH
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSECK---GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSV 1449 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~---~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~ 1449 (1459)
++|++||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++...
T Consensus 154 ~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p~~~ 233 (362)
T TIGR03258 154 IEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAPADG 233 (362)
T ss_pred cCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcCcH
Confidence 99999999999999999999999999987643 6899999999999765 8999999999999999999999887655
Q ss_pred H
Q 000503 1450 F 1450 (1459)
Q Consensus 1450 f 1450 (1459)
|
T Consensus 234 ~ 234 (362)
T TIGR03258 234 F 234 (362)
T ss_pred H
Confidence 5
No 176
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8e-40 Score=376.07 Aligned_cols=218 Identities=27% Similarity=0.416 Sum_probs=191.1
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
..|+++||+.+|+ ...+++|+||+|++||.+.+.|||||||||++++|.||..|++|+|.+||.|+..+|++ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999997 35799999999999999999999999999999999999999999999999999999986 5789
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCC----CChH----HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHM----NDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~----~~d~----ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
++|+|+..||+- ||++|+.++-. ..++ ++.++|+.++| +..-......|||||+||++||||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L---------~~~~~R~p~qLSGGQqQRVALARA 150 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGL---------EGFADRKPHQLSGGQQQRVALARA 150 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCc---------hhhhhhChhhhChHHHHHHHHHHH
Confidence 999999999986 99999977533 2333 34455555544 444455667899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCc
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1448 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~ 1448 (1459)
|..+|++|+||||-|+||.+-...++.-+++.. .+.|.|.|||+-+.... +|||+||++|+|...|+|+|+..+|.+
T Consensus 151 L~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~~ 230 (352)
T COG3842 151 LVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPAT 230 (352)
T ss_pred hhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcch
Confidence 999999999999999999999999988887653 38999999999987665 799999999999999999999999987
Q ss_pred HHH
Q 000503 1449 VFS 1451 (1459)
Q Consensus 1449 ~f~ 1451 (1459)
.|-
T Consensus 231 ~fV 233 (352)
T COG3842 231 RFV 233 (352)
T ss_pred HHH
Confidence 764
No 177
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-39 Score=348.35 Aligned_cols=196 Identities=29% Similarity=0.399 Sum_probs=167.7
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.+++++|+.+|.. ..||+|+||+|++||.|+|+||||||||||++++.|+.+|++|+|.+||.++..- ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 4899999999975 5699999999999999999999999999999999999999999999999988443 45799
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCCC---Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHMN---DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~~---~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
||+|++.||+- ||++|+...-+. +. +...+.|+.+ ||...-+.-...||||||||++|||||+
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~V---------gL~~~~~~~P~qLSGGMrQRVaiARAL~ 146 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELV---------GLAGFEDKYPHQLSGGMRQRVAIARALA 146 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHc---------CCcchhhcCccccChHHHHHHHHHHHHh
Confidence 99999999997 999998654322 11 2233334444 5555556677789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeC--CeE
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDH--GHL 1433 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~--G~I 1433 (1459)
.+|+||+||||.++||+.|...+|+-+.+.. .++||++|||++++... +|||+||.+ |+|
T Consensus 147 ~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 147 TRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred cCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999887764 36999999999998665 899999999 555
No 178
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.5e-39 Score=362.82 Aligned_cols=202 Identities=28% Similarity=0.390 Sum_probs=171.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHhcc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1299 (1459)
++++|++++|+++.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999964434699999999999999999999999999999999999999999999999999876543 47889
Q ss_pred cEEEeCCCcCCC-ccHHHhcCcCC---CCC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1300 FAVVPQSPFLFE-GSLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1300 i~~VpQdp~lf~-gTIReNLdp~~---~~~----d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
++|+||+|.+|. .|++||+.... ... ++++.++ ++.+|++........+||||||||++||||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~---------l~~~~l~~~~~~~~~~LSgG~~qrv~lara 152 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAA---------LEKVGLEGKAHALPMQLSGGEQQRVAIARA 152 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHH---------HHHcCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 999999999887 49999996431 111 1223333 344455555555556899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeE
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1433 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~I 1433 (1459)
|+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++
T Consensus 153 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 153 IVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998764 47899999999999976 899999999985
No 179
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-39 Score=367.18 Aligned_cols=226 Identities=26% Similarity=0.378 Sum_probs=188.5
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCCCChHHH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTPVRDL 1296 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i~~~~l 1296 (1459)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999964 3599999999999999999999999999999999999974 69999999999998888889
Q ss_pred hcccEEEeCCCcCC-CccHHHhcCcCCCC-----C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1297 RGRFAVVPQSPFLF-EGSLRDNLDPFHMN-----D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1297 R~~i~~VpQdp~lf-~gTIReNLdp~~~~-----~----d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
|++++|+||+|.+| ..|++||+.+.... . ++++.++++.+++.+.+ +........+||||||||+
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgG~~qrv 155 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEV-----KDRLDAPAGKLSGGQQQRL 155 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcch-----hhhhcCCcccCCHHHHHHH
Confidence 99999999999755 57999999643110 1 12334444444432211 1234455668999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 156 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14247 156 CIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVFTN 235 (250)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHHcC
Confidence 9999999999999999999999999999999999987678999999999999865 899999999999999999999876
Q ss_pred CCcHHHHHH
Q 000503 1446 ECSVFSSFV 1454 (1459)
Q Consensus 1446 ~~~~f~~l~ 1454 (1459)
+...+.+.+
T Consensus 236 ~~~~~~~~~ 244 (250)
T PRK14247 236 PRHELTEKY 244 (250)
T ss_pred CccHHHHHH
Confidence 554454433
No 180
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3e-39 Score=379.47 Aligned_cols=226 Identities=23% Similarity=0.390 Sum_probs=189.2
Q ss_pred cEEEEEEEEEecCC-----------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCC
Q 000503 1222 LIEFQNVTMRYKPS-----------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN 1290 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~-----------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~ 1290 (1459)
-++++|++++|+.. ...+++|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 58999999999631 2468999999999999999999999999999999999999999999999999998
Q ss_pred CChHH---HhcccEEEeCCC--cCCC-ccHHHhcCc----CC-CCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCC
Q 000503 1291 TPVRD---LRGRFAVVPQSP--FLFE-GSLRDNLDP----FH-MNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISF 1358 (1459)
Q Consensus 1291 i~~~~---lR~~i~~VpQdp--~lf~-gTIReNLdp----~~-~~~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~L 1358 (1459)
++.+. +|++++||+|+| .+++ .||++|+.. +. ..+.++..+. ..+.++.+|++ .........|
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~-----~~~~l~~vgl~~~~~~~~p~~L 162 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDR-----VKAMMLKVGLLPNLINRYPHEF 162 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHcCCChHHhcCCcccC
Confidence 87544 678999999999 4774 699999853 11 1233332221 12344445664 3456667789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEE
Q 000503 1359 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVE 1435 (1459)
Q Consensus 1359 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE 1435 (1459)
|||||||++|||||+.+|++||+||||++||..+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|
T Consensus 163 SgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive 242 (331)
T PRK15079 163 SGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVE 242 (331)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999987643 7899999999999986 89999999999999
Q ss_pred ecChhHHhccCCcHHHH
Q 000503 1436 QGNPQTLLQDECSVFSS 1452 (1459)
Q Consensus 1436 ~G~p~eLl~~~~~~f~~ 1452 (1459)
.|+++++++++...|.+
T Consensus 243 ~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 243 LGTYDEVYHNPLHPYTK 259 (331)
T ss_pred EcCHHHHHcCCCCHHHH
Confidence 99999999876555554
No 181
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-39 Score=361.84 Aligned_cols=206 Identities=29% Similarity=0.446 Sum_probs=174.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. .+++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEE
Confidence 478999999964 469999999999999999999999999999999999999999999999999986543 4678999
Q ss_pred EeCCCcCCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf~-gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||+|.+|. .|+++|+..... .+.++.. ....+.++.+|++........+||||||||++|||||+++|++
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~ 151 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIR-----ARVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSL 151 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 599999964311 1111111 1123445555776666666778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
|||||||++||+++.+.+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++++.|
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 152 LLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998864 37899999999998866 8999999999998875
No 182
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.4e-39 Score=363.62 Aligned_cols=206 Identities=29% Similarity=0.390 Sum_probs=175.7
Q ss_pred EEEEEEEEEecCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH----H
Q 000503 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD----L 1296 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~----l 1296 (1459)
|+++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996421 46999999999999999999999999999999999999999999999999998876433 4
Q ss_pred hcccEEEeCCCcCCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000503 1297 RGRFAVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1459)
Q Consensus 1297 R~~i~~VpQdp~lf~g-TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1459)
|++++|+||+|.+|.+ |++||+..... ....+. ...+.+.++.+|++........+||||||||++|||||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al 155 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARAL 155 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHH
Confidence 6789999999999987 99999975321 111111 12234455566787777777788999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeE
Q 000503 1373 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHL 1433 (1459)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~I 1433 (1459)
+++|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++
T Consensus 156 ~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 156 ANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred ccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999988754 7899999999999888999999999974
No 183
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-39 Score=374.16 Aligned_cols=218 Identities=25% Similarity=0.374 Sum_probs=183.8
Q ss_pred EEEEEEEEEecCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCC---------
Q 000503 1223 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--------- 1290 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~--------- 1290 (1459)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 88999999996432 259999999999999999999999999999999999999999999999987632
Q ss_pred ---------------CChHHHhcccEEEeCCC--cCCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCc-h
Q 000503 1291 ---------------TPVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE-T 1349 (1459)
Q Consensus 1291 ---------------i~~~~lR~~i~~VpQdp--~lf~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLd-t 1349 (1459)
.+...+|++++||||+| .+|..|++||+.+.. ..+.+++.+. ..+.++.+||+ .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~ 157 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELVGLDES 157 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHcCCChh
Confidence 13457789999999987 688889999997542 1233333221 22344445775 4
Q ss_pred hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEE
Q 000503 1350 FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILI 1427 (1459)
Q Consensus 1350 ~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlV 1427 (1459)
..+....+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++
T Consensus 158 ~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~v 237 (305)
T PRK13651 158 YLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIF 237 (305)
T ss_pred hhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEE
Confidence 5667777899999999999999999999999999999999999999999998764 48999999999998765 899999
Q ss_pred EeCCeEEEecChhHHhcc
Q 000503 1428 LDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1428 l~~G~IvE~G~p~eLl~~ 1445 (1459)
|++|++++.|+++++.++
T Consensus 238 l~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 238 FKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EECCEEEEECCHHHHhcC
Confidence 999999999999998865
No 184
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3e-39 Score=325.27 Aligned_cols=211 Identities=26% Similarity=0.424 Sum_probs=182.2
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|.+++|.++|.. .+ -..+++|++||+|||+||||||||||++++.||..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LP---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ce---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 568899999963 23 357899999999999999999999999999999999999999999999888774 467999
Q ss_pred EeCCCcCCCc-cHHHhcCcCC----CC---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFH----MN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~----~~---~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
+.||.-||.- ||++|+..+- +. ..+.+..++.++|+..+.+. -...||||||||++|||+|+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~R---------LP~~LSGGqRQRvALARclvR 146 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKR---------LPGELSGGQRQRVALARCLVR 146 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhh---------CccccCchHHHHHHHHHHHhc
Confidence 9999999986 9999987542 22 23456667777776655443 345799999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCc
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1448 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~ 1448 (1459)
+.+||+||||.|+||+.-...+...+.+.. ++.|+++|||..+.++. +||++++++|||++.|+-+++++.++.
T Consensus 147 ~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~~ 223 (231)
T COG3840 147 EQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKAS 223 (231)
T ss_pred cCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCCh
Confidence 999999999999999999999999887764 57899999999998876 899999999999999999999987653
No 185
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.1e-39 Score=365.73 Aligned_cols=219 Identities=22% Similarity=0.368 Sum_probs=187.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1301 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1301 (1459)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 3 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 3 LYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred EEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 789999999964 369999999999999999999999999999999999999999999999999988776644 56799
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCCCChHHH-------HHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHMNDDLKI-------WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~~~d~ei-------~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
|+||++.+|++ |++||+....... ..+ .....+..+.+.++.+|++.........||||||||++||||++
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~laral~ 159 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRD-KSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGMLLM 159 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcc-cccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHh
Confidence 99999999987 9999997532110 000 00011122345555567877777777889999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
++|++|+|||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 160 ~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 160 QDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred cCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 999999999999999999999999999987678999999999999976 89999999999999999999875
No 186
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-39 Score=368.87 Aligned_cols=222 Identities=27% Similarity=0.402 Sum_probs=186.7
Q ss_pred CCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCC--C
Q 000503 1219 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--T 1291 (1459)
Q Consensus 1219 ~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i 1291 (1459)
+.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3467999999999963 4699999999999999999999999999999999999975 89999999999975 3
Q ss_pred ChHHHhcccEEEeCCCcCCCccHHHhcCcCCC---C--C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhH
Q 000503 1292 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1362 (1459)
Q Consensus 1292 ~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~---~--~----d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQ 1362 (1459)
+...+|++++|+||+|.+|++|+++|+.+... . + ++++.++++.+++.+.+ ....+..+.+|||||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq 168 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-----KDRLHEPGTGLSGGQ 168 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-----hHHhhCCcccCCHHH
Confidence 45678899999999999999999999964211 1 1 12233344444332211 123456677899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhH
Q 000503 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1441 (1459)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1441 (1459)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 248 (267)
T PRK14235 169 QQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEK 248 (267)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999887667899999999999966 79999999999999999999
Q ss_pred HhccCC
Q 000503 1442 LLQDEC 1447 (1459)
Q Consensus 1442 Ll~~~~ 1447 (1459)
+..++.
T Consensus 249 ~~~~~~ 254 (267)
T PRK14235 249 MFTNPD 254 (267)
T ss_pred HHhCCC
Confidence 986544
No 187
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-39 Score=371.47 Aligned_cols=220 Identities=23% Similarity=0.379 Sum_probs=187.7
Q ss_pred cEEEEEEEEEecCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1222 LIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
.|+++||+++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 24699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEeCCC--cCCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1301 AVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1301 ~~VpQdp--~lf~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
+|+||+| .++..|+.+|+.+.. ..+++++.+. ..+.++.+|++.........||||||||++|||||+++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~ 158 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKR-----VDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALR 158 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 9999998 467789999997431 1233332211 12233333555555556678999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccC
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|++++++++.
T Consensus 159 p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (277)
T PRK13642 159 PEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATS 231 (277)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCH
Confidence 999999999999999999999999987753 78999999999999889999999999999999999998643
No 188
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=350.84 Aligned_cols=191 Identities=31% Similarity=0.389 Sum_probs=161.8
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------cEEE
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAY 676 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~y 676 (1459)
.+.+++++..|.. ..+|+|+||+|++||+++|+|||||||||||++|.|..+|++|+|.++| .+||
T Consensus 3 ~l~i~~v~~~f~~------~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~ 76 (248)
T COG1116 3 LLEIEGVSKSFGG------VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGY 76 (248)
T ss_pred eEEEEeeEEEeCc------eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEE
Confidence 4678888888764 3459999999999999999999999999999999999999999999987 5899
Q ss_pred EcCCCCCCC-CCHHHHhccCCCCC-------HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHH
Q 000503 677 VPQVPWILS-GTIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 748 (1459)
Q Consensus 677 ~~Q~~~l~~-~ti~~nI~~g~~~~-------~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARal 748 (1459)
|+|++-|+. -||+|||.+|-+.. +++.++.++..+|...-+..| ..||||||||||||||+
T Consensus 77 vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiARAL 145 (248)
T COG1116 77 VFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIARAL 145 (248)
T ss_pred EeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHHHH
Confidence 999998775 69999999986541 346777888888876555554 48999999999999999
Q ss_pred ccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeC--CeEE
Q 000503 749 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDK--GQVK 812 (1459)
Q Consensus 749 y~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~--G~i~ 812 (1459)
..+|++|||||||+|||+.|..++-+.++.--...++|+++|||++++.- -+|||++|.+ |+|.
T Consensus 146 ~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 146 ATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred hcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 99999999999999999999998877644322334689999999998865 4999999998 4553
No 189
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.5e-39 Score=365.22 Aligned_cols=216 Identities=25% Similarity=0.421 Sum_probs=185.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1301 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1301 (1459)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999963 359999999999999999999999999999999999999999999999999988776554 56899
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
|+||++.+|++ |+++|+..... ...++. ...+.+.++.+|++........+||||||||++||||++.+|+
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 153 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKER-----EEKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPK 153 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999987 99999964321 111111 1123445556688777777778999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 154 llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 223 (232)
T cd03218 154 FLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAAN 223 (232)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhcC
Confidence 999999999999999999999998764 47899999999987766 899999999999999999998753
No 190
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4.1e-39 Score=370.60 Aligned_cols=227 Identities=26% Similarity=0.345 Sum_probs=189.3
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHhc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRG 1298 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~ 1298 (1459)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999876643 3578
Q ss_pred ccEEEeCCCcCCCc-cHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1299 RFAVVPQSPFLFEG-SLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1299 ~i~~VpQdp~lf~g-TIReNLdp~----~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
+++|+||++.+|++ |+++|+.+. ...+.++. .....+.++.+|++.........||||||||++||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~ 159 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLL-----HSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA 159 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHh
Confidence 89999999999987 999998642 11111111 111233344456665556666789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1450 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1450 (1459)
++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++.+++....
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~ 239 (269)
T PRK11831 160 LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANPDPRV 239 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCCcHHH
Confidence 99999999999999999999999999987643 7899999999999876 89999999999999999999987654444
Q ss_pred HHHHH
Q 000503 1451 SSFVR 1455 (1459)
Q Consensus 1451 ~~l~~ 1455 (1459)
..++.
T Consensus 240 ~~~~~ 244 (269)
T PRK11831 240 RQFLD 244 (269)
T ss_pred HHHHH
Confidence 55543
No 191
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.9e-39 Score=363.27 Aligned_cols=217 Identities=29% Similarity=0.468 Sum_probs=186.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCC--ChHHHhccc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT--PVRDLRGRF 1300 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i--~~~~lR~~i 1300 (1459)
++++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999963 4699999999999999999999999999999999999999999999999999864 345678899
Q ss_pred EEEeCCCcCCC-ccHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1301 AVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1301 ~~VpQdp~lf~-gTIReNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
+|+||++.+|. .|+++|+.+.. ..+.++.. ....+.++.+|++.........||+|||||++||||++++
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 154 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAE-----KQARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVK 154 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcC
Confidence 99999999886 59999996531 11121111 1223455566887777777788999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
|++++|||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 155 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 155 PKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 99999999999999999999999998764 47999999999999975 8999999999999999999998654
No 192
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-39 Score=383.90 Aligned_cols=220 Identities=28% Similarity=0.393 Sum_probs=187.3
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++|++++|+. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 3899999999964 3599999999999999999999999999999999999999999999999999877653 57899
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
||||++.+|+. |++||+.+... .+.++..+ ...+.++.+|++........+||||||||++|||||+++|+
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~ 153 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPS 153 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999976 99999975321 12222111 12334444566666666667899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1450 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1450 (1459)
+||||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++...|
T Consensus 154 lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~~~ 229 (369)
T PRK11000 154 VFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPANRF 229 (369)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 9999999999999999999999987643 7899999999998865 89999999999999999999998776544
No 193
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-39 Score=367.98 Aligned_cols=223 Identities=27% Similarity=0.389 Sum_probs=185.0
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCC--CChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1294 (1459)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999964 469999999999999999999999999999999999997 479999999999864 3455
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCCC---CCh-----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---NDD-----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~~---~~d-----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
.+|+.++|+||+|.+|++|+++|+.+... ..+ +++.++++.++++.. .....+....+||||||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~qr~ 156 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKE-----TKDNLDRNAQAFSGGQQQRI 156 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcc-----hHHHhccChhhCCHHHHHHH
Confidence 67889999999999999999999975321 111 122333333333210 01233456678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||++++|+++||||||++||+++.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++..+
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14251 157 CIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMFIA 236 (251)
T ss_pred HHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999987778999999999999876 899999999999999999999876
Q ss_pred CCcHHH
Q 000503 1446 ECSVFS 1451 (1459)
Q Consensus 1446 ~~~~f~ 1451 (1459)
+.-.|.
T Consensus 237 ~~~~~~ 242 (251)
T PRK14251 237 PKKQIT 242 (251)
T ss_pred CCCHHH
Confidence 543343
No 194
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.1e-38 Score=364.08 Aligned_cols=227 Identities=26% Similarity=0.383 Sum_probs=189.4
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCC--------h
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--------V 1293 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~--------~ 1293 (1459)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999964 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhcccEEEeCCCcCCC-ccHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000503 1294 RDLRGRFAVVPQSPFLFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1368 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp~lf~-gTIReNLdp~----~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~L 1368 (1459)
..+|++++|+||+|.+|+ .|++||+... .....++..+ ...+.++.+|++........+||||||||++|
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~l 155 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKVGLAGKETSYPRRLSGGQQQRVAI 155 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCcchhhCChhhCChHHHHHHHH
Confidence 567889999999999886 5999999642 1112111111 12345555677766677778999999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
|||++++|++|||||||++||+++.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 156 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 235 (250)
T PRK11264 156 ARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFADP 235 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcCC
Confidence 999999999999999999999999999999998764 47899999999999976 8999999999999999999998654
Q ss_pred Cc-HHHHHHH
Q 000503 1447 CS-VFSSFVR 1455 (1459)
Q Consensus 1447 ~~-~f~~l~~ 1455 (1459)
.- ..+.++.
T Consensus 236 ~~~~~~~~~~ 245 (250)
T PRK11264 236 QQPRTRQFLE 245 (250)
T ss_pred CCHHHHHHHH
Confidence 32 3344443
No 195
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=6e-39 Score=381.35 Aligned_cols=221 Identities=25% Similarity=0.444 Sum_probs=189.6
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
..++++|++++|.. .++|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++...+.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999964 3589999999999999999999999999999999999999999999999999887764 5789
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+||+|++.+|+. |++||+.+.-. .++.++.+ .+.+.++.+|++.........||||||||++|||||+++|
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P 163 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP-----RVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKP 163 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999976 99999975321 22222211 1223344446666666677789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1450 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1450 (1459)
++||||||||+||..+.+.+.+.|++..+ +.|+|+|||+.+.+.. ||||++|++|+|++.|+|+++.+++...|
T Consensus 164 ~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~~~~ 240 (375)
T PRK09452 164 KVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLF 240 (375)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 99999999999999999999999988653 7899999999998765 89999999999999999999998876555
No 196
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.8e-38 Score=364.77 Aligned_cols=216 Identities=27% Similarity=0.378 Sum_probs=189.5
Q ss_pred CccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcc
Q 000503 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1299 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1299 (1459)
.+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~~----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLVG----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEec----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 3569999999852 4599999999999999999999999999999999999999999999998 3
Q ss_pred cEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1300 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1300 i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
++|+||++.+|++|+++|+.+.....+.++.++++.+++.+.+..+ +.++.+++.+.+||+|||||++|||||+++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999865444445566778888888877766 67888888888999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHH-HHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHH
Q 000503 1378 VLCLDECTANVDAQTASILQNA-ISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSF 1453 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~-I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l 1453 (1459)
||||||||++||+++.+.+.+. +++..+++|||+|||+++.+..||+|++|++|++++.|+++++.+.. +.|.+.
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~-~~~~~~ 255 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLR-PDFSSK 255 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcc-hHHHHH
Confidence 9999999999999999988765 45555689999999999999889999999999999999999998643 345443
No 197
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=9.9e-39 Score=364.61 Aligned_cols=218 Identities=30% Similarity=0.483 Sum_probs=186.4
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCC----------
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---------- 1292 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---------- 1292 (1459)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999964 46999999999999999999999999999999999999999999999999997653
Q ss_pred ---hHHHhcccEEEeCCCcCCC-ccHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000503 1293 ---VRDLRGRFAVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1459)
Q Consensus 1293 ---~~~lR~~i~~VpQdp~lf~-gTIReNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQ 1364 (1459)
...+|++++++||++.+|+ .|+++|+.... ....++.. ..+.+.++.+|++...+.....|||||||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~q 153 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAE-----KRAMELLDMVGLADKADHMPAQLSGGQQQ 153 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhHhhcChhhcCHHHHH
Confidence 2467889999999999886 69999996421 11111111 12344555567777677777889999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhH
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1441 (1459)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1441 (1459)
|++|||||+++|+++||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.+ |||+++|++|++++.|++++
T Consensus 154 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T TIGR03005 154 RVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDE 233 (252)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987653 7899999999999865 89999999999999999999
Q ss_pred HhccCC
Q 000503 1442 LLQDEC 1447 (1459)
Q Consensus 1442 Ll~~~~ 1447 (1459)
+.+++.
T Consensus 234 ~~~~~~ 239 (252)
T TIGR03005 234 IFRQPK 239 (252)
T ss_pred HhcCCC
Confidence 987654
No 198
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3e-39 Score=360.98 Aligned_cols=209 Identities=28% Similarity=0.442 Sum_probs=176.8
Q ss_pred EEEEEEEEEecCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999996432 269999999999999999999999999999999999999999999999999976 346778999
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+|+||+|.+|++ |++||+.... ..+.++..+ ...+.++.+|++........+||||||||++||||++++|
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDP 155 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999985421 112211111 1233444456666666677789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 156 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 156 PVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999998764 47999999999998876 8999999999998865
No 199
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=6.7e-39 Score=366.91 Aligned_cols=221 Identities=23% Similarity=0.367 Sum_probs=187.1
Q ss_pred CccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCC--------
Q 000503 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT-------- 1291 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i-------- 1291 (1459)
.+.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999964 3599999999999999999999999999999999999999999999999998642
Q ss_pred -----ChHHHhcccEEEeCCCcCCCc-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhh-hcCCCCCCh
Q 000503 1292 -----PVRDLRGRFAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGISFSV 1360 (1459)
Q Consensus 1292 -----~~~~lR~~i~~VpQdp~lf~g-TIReNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lGLdt~v-~e~G~~LSg 1360 (1459)
....+|++++|+||+|.+|++ |++||+.... ...+.+. +..+.+.++.+|++... +.....|||
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~gl~~~~~~~~~~~LS~ 155 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEA-----RERAVKYLAKVGIDERAQGKYPVHLSG 155 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHH-----HHHHHHHHHHcCCChhhhhCCcccCCH
Confidence 135678899999999999985 9999996421 1111111 11223445555776654 566778999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecC
Q 000503 1361 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1438 (1459)
Q Consensus 1361 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~ 1438 (1459)
|||||++|||||+++|+++||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|++++.|+
T Consensus 156 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (257)
T PRK10619 156 GQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGA 235 (257)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998764 48999999999999987 89999999999999999
Q ss_pred hhHHhccCC
Q 000503 1439 PQTLLQDEC 1447 (1459)
Q Consensus 1439 p~eLl~~~~ 1447 (1459)
++++.+.+.
T Consensus 236 ~~~~~~~~~ 244 (257)
T PRK10619 236 PEQLFGNPQ 244 (257)
T ss_pred HHHhhhCcc
Confidence 999986543
No 200
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.7e-39 Score=348.08 Aligned_cols=178 Identities=33% Similarity=0.566 Sum_probs=166.3
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+...+++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999975434699999999999999999999999999999999999999999999999998776 6678899999
Q ss_pred EeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000503 1303 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1459)
Q Consensus 1303 VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1459)
+||+|.+|+.|++||+ ..+||+|||||++||||++++|++||||
T Consensus 80 ~~q~~~~~~~tv~~~i------------------------------------~~~LS~G~~qrv~laral~~~p~~lllD 123 (178)
T cd03247 80 LNQRPYLFDTTLRNNL------------------------------------GRRFSGGERQRLALARILLQDAPIVLLD 123 (178)
T ss_pred EccCCeeecccHHHhh------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999997 3479999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCeEEEec
Q 000503 1383 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1383 EaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G 1437 (1459)
|||++||.++.+.+.+.|++..+++|+|+++|+++.+..||++++|++|++++.|
T Consensus 124 EP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 124 EPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999877789999999999999889999999999999865
No 201
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4e-39 Score=360.71 Aligned_cols=207 Identities=25% Similarity=0.385 Sum_probs=175.8
Q ss_pred EEEEEEEEEecCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH---Hh
Q 000503 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1297 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1297 (1459)
++++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996422 46999999999999999999999999999999999999999999999999998877654 34
Q ss_pred -cccEEEeCCCcCCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000503 1298 -GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1459)
Q Consensus 1298 -~~i~~VpQdp~lf~-gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1459)
++++|+||+|.+|+ .|++||+.... ..+..+. .+ ...+.++.+|++.........||||||||++||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~---~~--~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral 156 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEA---KE--RAYEMLEKVGLEHRINHRPSELSGGERQRVAIARAL 156 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHH---HH--HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 68999999999986 59999996521 1111111 11 123455556777767777778999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEE
Q 000503 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLV 1434 (1459)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~Iv 1434 (1459)
+++|+||||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+..+|+|++|++|+++
T Consensus 157 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 157 VNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred hCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999998764 378999999999999889999999999986
No 202
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-39 Score=367.77 Aligned_cols=220 Identities=23% Similarity=0.377 Sum_probs=186.8
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCC--CCh
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPV 1293 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~ 1293 (1459)
..|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 36999999999953 469999999999999999999999999999999999997 589999999999864 346
Q ss_pred HHHhcccEEEeCCCcCCCccHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000503 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp~lf~gTIReNLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQr 1365 (1459)
..+|+.++|+||+|.+|.+|+++|+.... ..++ +++.++++.+++.+.+ +...+.....||+|||||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LS~G~~qr 171 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-----KDDLHKSALTLSGGQQQR 171 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-----hhhhcCCcccCCHHHHHH
Confidence 67889999999999999999999996531 1111 2233444444433221 234566777899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
++||||++++|++|||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 172 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 251 (267)
T PRK14237 172 LCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIFT 251 (267)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999988778999999999999865 89999999999999999999987
Q ss_pred cCC
Q 000503 1445 DEC 1447 (1459)
Q Consensus 1445 ~~~ 1447 (1459)
.+.
T Consensus 252 ~~~ 254 (267)
T PRK14237 252 NPK 254 (267)
T ss_pred CCC
Confidence 543
No 203
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-39 Score=368.15 Aligned_cols=219 Identities=23% Similarity=0.407 Sum_probs=187.0
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++|++++|++..+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 48999999999754446999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEeCCCc--CCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1302 VVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1302 ~VpQdp~--lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
|+||+|. ++..|+++|+.+... ...++..+ .+.+.++.+|++........+||+|||||++||||++++|
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNP 161 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999994 445689999864321 12222111 1223344446665556667789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhcc
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||||++|++|++++.|+++++.++
T Consensus 162 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 162 SVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999988643 7899999999999988999999999999999999999765
No 204
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=8.2e-39 Score=381.95 Aligned_cols=220 Identities=26% Similarity=0.416 Sum_probs=189.4
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.++++|++++|+. .++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999964 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCcC-CCccHHHhcCcCCC-----C---C---hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000503 1302 VVPQSPFL-FEGSLRDNLDPFHM-----N---D---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1459)
Q Consensus 1302 ~VpQdp~l-f~gTIReNLdp~~~-----~---~---d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LA 1369 (1459)
++||++.+ |+.|++||+.+... . . ++++.++++.++ +..........||||||||++||
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vg---------l~~~~~~~~~~LSgGerQRv~IA 151 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTG---------VAQFADRPVTSLSGGERQRVLLA 151 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcC---------CchhhcCChhhCCHHHHHHHHHH
Confidence 99999987 57799999965321 1 1 223444555444 44444445568999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000503 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1447 (1459)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1447 (1459)
|||+++|+||||||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||||++|++|++++.|+|++++..+
T Consensus 152 rAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~~- 230 (402)
T PRK09536 152 RALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTAD- 230 (402)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCcH-
Confidence 99999999999999999999999999999998875 47899999999999965 8999999999999999999998643
Q ss_pred cHHHHHH
Q 000503 1448 SVFSSFV 1454 (1459)
Q Consensus 1448 ~~f~~l~ 1454 (1459)
.+.+++
T Consensus 231 -~l~~~~ 236 (402)
T PRK09536 231 -TLRAAF 236 (402)
T ss_pred -HHHHHh
Confidence 455544
No 205
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-39 Score=370.09 Aligned_cols=220 Identities=28% Similarity=0.460 Sum_probs=188.6
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCC---ceEEECCEeCCCCChHHHh
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG---GQILVDGLNIINTPVRDLR 1297 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~---G~I~IDG~di~~i~~~~lR 1297 (1459)
+.|+++|++++|++...++|+|+||+|++||++||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999996544469999999999999999999999999999999999999987 8999999999888777889
Q ss_pred cccEEEeCCC--cCCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000503 1298 GRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1459)
Q Consensus 1298 ~~i~~VpQdp--~lf~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1459)
++++|+||+| .+++.|++||+.+.. ..++++..+ ...+.++.+|++...+....+||+|||||++|||||
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral 158 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGIL 158 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHH
Confidence 9999999998 466889999997531 122322211 122334444666666667779999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhcc
Q 000503 1373 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+++|++|||||||++||..+.+.+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|+++++.++
T Consensus 159 ~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 159 AVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999988753 7899999999999988999999999999999999998764
No 206
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-39 Score=371.43 Aligned_cols=218 Identities=30% Similarity=0.457 Sum_probs=185.1
Q ss_pred EEEEEEEEEecCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCC----ChHH
Q 000503 1223 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRD 1295 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~ 1295 (1459)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999996432 3699999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcccEEEeCCC--cCCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000503 1296 LRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1369 (1459)
Q Consensus 1296 lR~~i~~VpQdp--~lf~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQrl~LA 1369 (1459)
+|++++|+||+| .+|+.|+++|+.+.. ..++++..+ ...+.++.+|++. ........||||||||++||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la 157 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEA-----LAREKLALVGISESLFEKNPFELSGGQMRRVAIA 157 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHH
Confidence 888999999998 678899999996431 122222221 1233445557763 45666778999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
||++++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 158 GILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998764 37899999999999865 899999999999999999998764
No 207
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-39 Score=372.75 Aligned_cols=221 Identities=25% Similarity=0.388 Sum_probs=185.2
Q ss_pred CccEEEEEEEEEecCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCC----C-
Q 000503 1220 QGLIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----T- 1291 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~----i- 1291 (1459)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46799999999996432 259999999999999999999999999999999999999999999999999853 2
Q ss_pred ChHHHhcccEEEeCCC--cCCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHH
Q 000503 1292 PVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQL 1365 (1459)
Q Consensus 1292 ~~~~lR~~i~~VpQdp--~lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQrQr 1365 (1459)
+...+|++++|+||+| .+|..|+++|+.+... ...++..+ + +.+.++.+|++ ...+.....||||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~---~--~~~ll~~~~L~~~~~~~~~~~LS~Gq~qr 158 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYK---K--VPELLKLVQLPEDYVKRSPFELSGGQKRR 158 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHH---H--HHHHHHHcCCChhHhcCChhhCCHHHHHH
Confidence 4567888999999998 4678899999964321 12222211 1 22344444773 44566677899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHH
Q 000503 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1442 (1459)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1442 (1459)
++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 159 v~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 238 (289)
T PRK13645 159 VALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEI 238 (289)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999987643 7899999999998865 899999999999999999998
Q ss_pred hcc
Q 000503 1443 LQD 1445 (1459)
Q Consensus 1443 l~~ 1445 (1459)
.++
T Consensus 239 ~~~ 241 (289)
T PRK13645 239 FSN 241 (289)
T ss_pred hcC
Confidence 764
No 208
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-39 Score=366.75 Aligned_cols=221 Identities=26% Similarity=0.405 Sum_probs=184.3
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCCCC--hHH
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINTP--VRD 1295 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i~--~~~ 1295 (1459)
-+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999963 469999999999999999999999999999999999986 47999999999987653 346
Q ss_pred HhcccEEEeCCCcCCCccHHHhcCcCC---CC--ChHHHHHHHHHhcHHHHHHhCCCc----hhhhcCCCCCChhHHHHH
Q 000503 1296 LRGRFAVVPQSPFLFEGSLRDNLDPFH---MN--DDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1296 lR~~i~~VpQdp~lf~gTIReNLdp~~---~~--~d~ei~~aL~~~~l~~~i~~lGLd----t~v~e~G~~LSgGQrQrl 1366 (1459)
+|++++|+||+|.+|++|+++|+.+.. .. ..++.. ....+.++.+|++ +.++..+.+||||||||+
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv 158 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLD-----EIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRL 158 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHH-----HHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHH
Confidence 788999999999999999999996431 11 111111 0122333334543 245566778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||++++|+||||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 238 (251)
T PRK14244 159 CIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIFKN 238 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999987678999999999999876 899999999999999999999987
Q ss_pred CCcHH
Q 000503 1446 ECSVF 1450 (1459)
Q Consensus 1446 ~~~~f 1450 (1459)
+...+
T Consensus 239 ~~~~~ 243 (251)
T PRK14244 239 PQSSK 243 (251)
T ss_pred CCChH
Confidence 65544
No 209
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-39 Score=366.22 Aligned_cols=220 Identities=27% Similarity=0.413 Sum_probs=183.6
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcc---CCC--CCceEEECCEeCCCC--ChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL---TPI--CGGQILVDGLNIINT--PVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl---~~~--~~G~I~IDG~di~~i--~~~ 1294 (1459)
.++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 4899999999964 4599999999999999999999999999999999997 454 589999999999764 346
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCC---CC-Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~---~~-~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
.+|++++|+||+|.+|++|+++|+.+.. .. .. +++.++++.+++.+. ++...+..+.+||||||||+
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~G~~qrv 155 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDE-----VKDKLKESAFALSGGQQQRL 155 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcc-----hhhhhhCCcccCCHHHHHHH
Confidence 7788999999999999999999996421 11 11 123333333332211 12345666778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 156 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~~ 235 (250)
T PRK14245 156 CIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFTN 235 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999999999988778999999999999865 899999999999999999999876
Q ss_pred CCc
Q 000503 1446 ECS 1448 (1459)
Q Consensus 1446 ~~~ 1448 (1459)
+..
T Consensus 236 ~~~ 238 (250)
T PRK14245 236 PEK 238 (250)
T ss_pred CCC
Confidence 543
No 210
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-39 Score=375.22 Aligned_cols=227 Identities=25% Similarity=0.403 Sum_probs=187.4
Q ss_pred cEEEEEEEEEecCC--------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh
Q 000503 1222 LIEFQNVTMRYKPS--------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV 1293 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~--------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~ 1293 (1459)
.|+++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 48999999999631 2468999999999999999999999999999999999999999999999999988875
Q ss_pred H---HHhcccEEEeCCCc--CCCc-cHHHhcCc----CCCCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhH
Q 000503 1294 R---DLRGRFAVVPQSPF--LFEG-SLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQ 1362 (1459)
Q Consensus 1294 ~---~lR~~i~~VpQdp~--lf~g-TIReNLdp----~~~~~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQ 1362 (1459)
. .+|+++++|||+|. +++. |+.+|+.. .......+. +....+.++.+|++. ........|||||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~gL~~~~~~~~p~~LSgGq 159 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAER-----REKALAMMAKVGLRPEHYDRYPHMFSGGQ 159 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHCCCChHHhcCCCccCCHHH
Confidence 3 56889999999994 5553 88888742 111122111 112234445556643 3455667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecCh
Q 000503 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1439 (1459)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1439 (1459)
|||++|||||+.+|+|||+||||++||..+.+.|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|.|++
T Consensus 160 ~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~ 239 (327)
T PRK11308 160 RQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTK 239 (327)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987643 7899999999999976 899999999999999999
Q ss_pred hHHhccCCcHHHHH
Q 000503 1440 QTLLQDECSVFSSF 1453 (1459)
Q Consensus 1440 ~eLl~~~~~~f~~l 1453 (1459)
+++++++...|.+.
T Consensus 240 ~~~~~~p~hpyt~~ 253 (327)
T PRK11308 240 EQIFNNPRHPYTQA 253 (327)
T ss_pred HHHhcCCCCHHHHH
Confidence 99998776555543
No 211
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=7.1e-39 Score=353.98 Aligned_cols=197 Identities=30% Similarity=0.473 Sum_probs=178.5
Q ss_pred EEEEEEEEEecCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcc
Q 000503 1223 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1299 (1459)
|+++||+++|++.. +++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997542 3699999999999999999999999999999999999999999999999 6
Q ss_pred cEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1300 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1300 i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
++|+||+|.+|++|++||+.+....++++.+++++.+++.+.+..+ |+++.+++.+.+||+|||||++||||++++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999876555566778888888998888877 89999988889999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHH-HHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCe
Q 000503 1378 VLCLDECTANVDAQTASILQN-AISSEC-KGMTVITIAHRISTVLNMDEILILDHGH 1432 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~-~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~~G~ 1432 (1459)
+++|||||++||.++.+.+.+ .+++.. +++|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999887766 566553 4689999999999999999999999985
No 212
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-39 Score=365.88 Aligned_cols=219 Identities=22% Similarity=0.378 Sum_probs=183.6
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccC--CC---CCceEEECCEeCCCC--ChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PI---CGGQILVDGLNIINT--PVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~--~~---~~G~I~IDG~di~~i--~~~ 1294 (1459)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. .| ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 4899999999964 36999999999999999999999999999999999995 36 499999999998653 345
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcC----CCCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPF----HMNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~----~~~~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
.+|+.++|+||+|.+|+.|++||+.+. +...+ +++.++++.+++.+. +....+....+||+|||||+
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~G~~qrv 157 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDE-----VKDRLHDSALGLSGGQQQRV 157 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchh-----HHHHHhcCcccCCHHHHHHH
Confidence 678899999999999999999998642 11111 223334444443221 12345566678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||++++|++|||||||++||.++.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 237 (252)
T PRK14239 158 CIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFMN 237 (252)
T ss_pred HHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999987667999999999998865 899999999999999999999876
Q ss_pred CC
Q 000503 1446 EC 1447 (1459)
Q Consensus 1446 ~~ 1447 (1459)
+.
T Consensus 238 ~~ 239 (252)
T PRK14239 238 PK 239 (252)
T ss_pred CC
Confidence 54
No 213
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-39 Score=368.04 Aligned_cols=221 Identities=25% Similarity=0.361 Sum_probs=183.4
Q ss_pred EEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH----hcc
Q 000503 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGR 1299 (1459)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~ 1299 (1459)
.++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 46688888854 358999999999999999999999999999999999999999999999999988776543 468
Q ss_pred cEEEeCCCcCCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1300 FAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1300 i~~VpQdp~lf~-gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
++|+||+|.+|+ .|+++|+.... .....+.. ....+.++.+|++........+||||||||++||||++++
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~ 178 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAERE-----ERAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVD 178 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999885 59999996421 11111111 1123344445666556666678999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1451 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1451 (1459)
|+||||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++++++...|.
T Consensus 179 p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~ 257 (269)
T cd03294 179 PDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPANDYV 257 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCcCcHHH
Confidence 99999999999999999999999998764 37999999999999865 899999999999999999999876654443
No 214
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-39 Score=366.37 Aligned_cols=222 Identities=23% Similarity=0.379 Sum_probs=185.2
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCCC--ChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1294 (1459)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 12 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 5999999999963 4599999999999999999999999999999999999985 799999999998653 345
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCC---CCChH----HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~---~~~d~----ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~ 1367 (1459)
.+|+.++|+||++.+|+.|+++|+.+.. ..+.+ ++.++++.+++.+. ++.........||||||||++
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LSgG~~qrv~ 164 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDE-----TSDRLKSPALSLSGGQQQRLC 164 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcc-----hhhhhcCChhhCCHHHHHHHH
Confidence 6788999999999999999999996421 11221 23334444333211 123345556689999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
|||||+++|+||||||||++||.++.+.+.+.|++..+++|||+|||+++.+.+ ||||++|++|++++.|+++++.+++
T Consensus 165 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 244 (258)
T PRK14268 165 IARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFHNP 244 (258)
T ss_pred HHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCC
Confidence 999999999999999999999999999999999987668999999999999876 8999999999999999999998765
Q ss_pred CcHH
Q 000503 1447 CSVF 1450 (1459)
Q Consensus 1447 ~~~f 1450 (1459)
...+
T Consensus 245 ~~~~ 248 (258)
T PRK14268 245 REKS 248 (258)
T ss_pred CCHH
Confidence 4433
No 215
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=365.76 Aligned_cols=221 Identities=24% Similarity=0.366 Sum_probs=184.7
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC--C---CCceEEECCEeCCC--CChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIIN--TPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~--i~~~ 1294 (1459)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 4899999999964 369999999999999999999999999999999999997 3 59999999999864 4456
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCCC----CChHH----HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~~----~~d~e----i~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
.+|++++|+||+|.+|++|+++|+.+... .++++ +.++++..++.+.+ ....+....+||||||||+
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~l~~~~~~LS~Gq~qrv 164 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-----KDRLHTQALSLSGGQQQRL 164 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hhhhhCCcccCCHHHHHHH
Confidence 78899999999999999999999964321 12222 22233333322111 2334566778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||++++|+|++|||||++||.++...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 165 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 244 (259)
T PRK14274 165 CIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFSN 244 (259)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhhC
Confidence 9999999999999999999999999999999999987678999999999999876 899999999999999999999876
Q ss_pred CCcH
Q 000503 1446 ECSV 1449 (1459)
Q Consensus 1446 ~~~~ 1449 (1459)
+...
T Consensus 245 ~~~~ 248 (259)
T PRK14274 245 PDDQ 248 (259)
T ss_pred CCCH
Confidence 5543
No 216
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-39 Score=365.06 Aligned_cols=221 Identities=29% Similarity=0.437 Sum_probs=185.5
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCC--CCh
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1293 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1293 (1459)
|.|+++||+++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 56999999999964 3699999999999999999999999999999999999863 69999999999875 455
Q ss_pred HHHhcccEEEeCCCcCCCccHHHhcCcCCC----CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000503 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp~lf~gTIReNLdp~~~----~~----d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQr 1365 (1459)
..+|++++|+||+|.+|+.|+++|+..... .+ ++++.++++.+++.+. +....+.....||||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDE-----VKDRLKKSALGLSGGQQQR 154 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchh-----hHHHHhcCCCCCCHHHHHH
Confidence 678999999999999999999999964321 11 1223333344333221 1233456667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
++||||++.+|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++..
T Consensus 155 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 234 (250)
T PRK14240 155 LCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999887668999999999998876 89999999999999999999987
Q ss_pred cCCc
Q 000503 1445 DECS 1448 (1459)
Q Consensus 1445 ~~~~ 1448 (1459)
++..
T Consensus 235 ~~~~ 238 (250)
T PRK14240 235 NPKD 238 (250)
T ss_pred CCCC
Confidence 6543
No 217
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-39 Score=365.19 Aligned_cols=225 Identities=24% Similarity=0.410 Sum_probs=187.4
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCCC--ChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1294 (1459)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999963 4699999999999999999999999999999999999984 899999999998753 345
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
.+|++++++||+|.+|+.|+++|+.... ...+ +++.++++..++.+.+ +...+....+||+|||||+
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~qr~ 155 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-----KSELNKPGTRLSGGQQQRL 155 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-----HHHHhCChhhcCHHHHHHH
Confidence 6788999999999999999999997431 1111 1233334444332211 2335566778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||++++|+||+|||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 156 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14262 156 CIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIVER 235 (250)
T ss_pred HHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999999999987778999999999998765 899999999999999999999876
Q ss_pred CCcHHHHH
Q 000503 1446 ECSVFSSF 1453 (1459)
Q Consensus 1446 ~~~~f~~l 1453 (1459)
+...|.+.
T Consensus 236 ~~~~~~~~ 243 (250)
T PRK14262 236 PKNKLTEE 243 (250)
T ss_pred CCChHHHH
Confidence 54445543
No 218
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=8.4e-39 Score=367.43 Aligned_cols=227 Identities=24% Similarity=0.378 Sum_probs=186.6
Q ss_pred EEEEEEEEEecCC-------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH
Q 000503 1223 IEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD 1295 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~ 1295 (1459)
|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 356999999999999999999999999999999999999999999999999998876543
Q ss_pred ---HhcccEEEeCCCc--CCC-ccHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000503 1296 ---LRGRFAVVPQSPF--LFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1364 (1459)
Q Consensus 1296 ---lR~~i~~VpQdp~--lf~-gTIReNLdp~----~~~~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQrQ 1364 (1459)
+|++++|+||+|. +++ .|+++|+... .....++ ....+.+.++.+|++ ...+.....|||||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~q 157 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESE-----QKARIAELLDMVGLRSEDADKLPRQLSGGQLQ 157 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHcCCChhhhhCChhhCCHHHHH
Confidence 6788999999983 443 6999998531 1111111 111233455555775 3456677789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhH
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1441 (1459)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1441 (1459)
|++||||++++|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||++++|++|++++.|++++
T Consensus 158 rv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 237 (265)
T TIGR02769 158 RINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQ 237 (265)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999975 89999999999999999999
Q ss_pred HhccCCcHHHHHH
Q 000503 1442 LLQDECSVFSSFV 1454 (1459)
Q Consensus 1442 Ll~~~~~~f~~l~ 1454 (1459)
+...++...+++.
T Consensus 238 ~~~~~~~~~~~~~ 250 (265)
T TIGR02769 238 LLSFKHPAGRNLQ 250 (265)
T ss_pred HcCCCCHHHHHHH
Confidence 9875432333343
No 219
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-39 Score=362.57 Aligned_cols=217 Identities=28% Similarity=0.444 Sum_probs=186.6
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH-Hhccc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1300 (1459)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 3889999999963 46999999999999999999999999999999999999999999999999998877644 57889
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCCC----ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHMN----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~~----~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
+++||++.+|++ |++||+...... +.++. +....+.++.+|++.........||||||||++||||++++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAAN 155 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcC
Confidence 999999998885 999999754211 11111 12234556666887777777788999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
|++|||||||++||+.+.+.+.+.+++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 156 PKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999998754 48899999999987765 899999999999999999999764
No 220
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-39 Score=355.88 Aligned_cols=202 Identities=30% Similarity=0.463 Sum_probs=174.0
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++||+++|+. .++++|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++|
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 579999999964 36999999999999 99999999999999999999999999999999999998776 778899999
Q ss_pred EeCCCcCCCc-cHHHhcCcCC---CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~---~~~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
+||+|.+|.+ |++||+.... ..+. +++.++++.. |++.........||||||||++||||+++
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 147 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELV---------NLGDRAKKKIGSLSGGMRRRVGIAQALVG 147 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHC---------CCHHHHhCchhhCCHHHHHHHHHHHHHhc
Confidence 9999999986 9999986421 1111 2233444444 44433444556799999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
+|+++||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. |||+++|++|++++.|
T Consensus 148 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 148 DPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999987777999999999999975 8999999999999865
No 221
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=378.80 Aligned_cols=222 Identities=27% Similarity=0.426 Sum_probs=189.8
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
..++++|++++|+. .++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++.+.+. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 35999999999964 369999999999999999999999999999999999999999999999999988765 47789
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+||+|++.+|+. |++||+.+... .+..++.+ .+.+.++.+|++........+||||||||++|||||+++|
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P 168 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRP 168 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 99999975421 22222221 1234455557766666677789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1451 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1451 (1459)
++|+||||||+||..+.+.+.+.|++.. .+.|+|+|||+++.+.. ||||++|++|++++.|+|+|+..++...|-
T Consensus 169 ~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~~~ 246 (377)
T PRK11607 169 KLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYS 246 (377)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccHHH
Confidence 9999999999999999999988877653 37899999999998765 899999999999999999999988776553
No 222
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.9e-39 Score=356.73 Aligned_cols=204 Identities=31% Similarity=0.469 Sum_probs=174.1
Q ss_pred EEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000503 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1459)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1459)
+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 46899999965334699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred eCCCc--CCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1304 PQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1304 pQdp~--lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
||+|. ++..|+++|+.+... .++.+..+ ...+.++.+|++.........||||||||++|||||+++|++
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~l 155 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDI 155 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99983 677899999965311 12211111 123444555776666677778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCe
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGH 1432 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~ 1432 (1459)
|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 156 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 156 LLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999998765 47899999999999987 99999999985
No 223
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=364.08 Aligned_cols=222 Identities=23% Similarity=0.367 Sum_probs=184.7
Q ss_pred CccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC--C---CCceEEECCEeCCCC--C
Q 000503 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIINT--P 1292 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~i--~ 1292 (1459)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 467999999999963 469999999999999999999999999999999999986 4 689999999999753 3
Q ss_pred hHHHhcccEEEeCCCcCCC-ccHHHhcCcC----CCCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHH
Q 000503 1293 VRDLRGRFAVVPQSPFLFE-GSLRDNLDPF----HMNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQR 1363 (1459)
Q Consensus 1293 ~~~lR~~i~~VpQdp~lf~-gTIReNLdp~----~~~~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQr 1363 (1459)
...+|++++|+||++.+|. .|+++|+... ...+. +++.++++.+++.+.+ +...+....+||+|||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~ 154 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEV-----KDRLKSNAMELSGGQQ 154 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hHHhhCCcCcCCHHHH
Confidence 4567889999999999998 5999999642 11111 1223333333332211 1234456678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHH
Q 000503 1364 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1442 (1459)
Q Consensus 1364 Qrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1442 (1459)
||++||||++++|++|||||||++||..+.+.+.+.|++..+++|||++||+++.+.. ||++++|++|++++.|+++++
T Consensus 155 qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14256 155 QRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKI 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778899999999999865 899999999999999999999
Q ss_pred hccCCc
Q 000503 1443 LQDECS 1448 (1459)
Q Consensus 1443 l~~~~~ 1448 (1459)
..++..
T Consensus 235 ~~~~~~ 240 (252)
T PRK14256 235 FTTPEK 240 (252)
T ss_pred HhCCCc
Confidence 876543
No 224
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=360.45 Aligned_cols=218 Identities=25% Similarity=0.399 Sum_probs=185.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCC------CCChHHH
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII------NTPVRDL 1296 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~------~i~~~~l 1296 (1459)
++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+
T Consensus 3 l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 3 IQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 789999999964 36999999999999999999999999999999999999999999999999874 1234567
Q ss_pred hcccEEEeCCCcCCCc-cHHHhcCcC--C--CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1297 RGRFAVVPQSPFLFEG-SLRDNLDPF--H--MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1297 R~~i~~VpQdp~lf~g-TIReNLdp~--~--~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
|++++|+||+|.+|++ |++||+... . ....++.. ..+.+.++.+|++...+....+||||||||++||||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~lara 155 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIARA 155 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 8899999999999976 999999631 1 11222211 123455566688777777778999999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1447 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1447 (1459)
++++|+|+||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+...
T Consensus 156 l~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~~ 233 (242)
T PRK11124 156 LMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQPQT 233 (242)
T ss_pred HhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcCccc
Confidence 999999999999999999999999999998764 47999999999999976 89999999999999999999865433
No 225
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=366.91 Aligned_cols=217 Identities=28% Similarity=0.470 Sum_probs=185.5
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCC-hHHHhcccE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLRGRFA 1301 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~lR~~i~ 1301 (1459)
++++|++++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999633 45999999999999999999999999999999999999999999999999998765 467788999
Q ss_pred EEeCCCc--CCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1302 VVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1302 ~VpQdp~--lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
|+||+|. +++.|+++|+.+... .+.++..+ .+.+.++.+|++.........||+|||||++|||||+.+|
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRK-----RVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEP 155 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999985 567899999975421 12222111 1223344457766666677789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhcc
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||||||++||+.+...+.+.|++.. +++|||++||+++.+..||||++|++|++++.|+++++...
T Consensus 156 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 156 ECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999998764 48999999999999988999999999999999999998764
No 226
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-39 Score=358.36 Aligned_cols=212 Identities=27% Similarity=0.431 Sum_probs=177.2
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREP-REVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcCh-HHHhhcEEE
Confidence 578999999964 36999999999999999999999999999999999999999999999999987633 567889999
Q ss_pred EeCCCcCCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||++.++++ |+++|+.... ..+.++..+ ...+.++.+|++.........||||||||++||||++.+|++
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~l 152 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRE-----RIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEV 152 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999998875 9999996421 111111111 122333344555444555568999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHH
Q 000503 1379 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1442 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eL 1442 (1459)
|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.. ||||++|++|++++.|+++++
T Consensus 153 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 153 LFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred EEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999987642 7899999999999876 899999999999999998875
No 227
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=367.69 Aligned_cols=217 Identities=26% Similarity=0.410 Sum_probs=185.0
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++|
T Consensus 4 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 4 IETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred EEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 7899999999643 359999999999999999999999999999999999999999999999999988787888999999
Q ss_pred EeCCC--cCCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1303 VPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1303 VpQdp--~lf~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
+||+| .+|+.|+++|+.... ..+.++..+ ...+.++.+|+..........||||||||++|||||+.+|+
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p~ 157 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH-----RVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEPQ 157 (277)
T ss_pred EecCcccccccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 99998 477889999996422 122222111 12233344455555566667899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hcCEEEEEeCCeEEEecChhHHhcc
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+|||||||++||+.+.+.+.+.+++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 158 llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 158 VLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 9999999999999999999999987653 789999999999986 4899999999999999999999864
No 228
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=361.28 Aligned_cols=217 Identities=24% Similarity=0.410 Sum_probs=182.1
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH-Hhccc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1300 (1459)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... .|+.+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999963 46999999999999999999999999999999999999999999999999998887654 67889
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l-GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
+|+||++.+|++ |+++|+..... .+..+..+. +.+.++.+ +++.........||||||||++||||++++|+
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQER-----IKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPR 157 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHH-----HHHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhCCC
Confidence 999999999985 99999975321 122222111 12222223 24333444556899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 158 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 158 LLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 999999999999999999999998764 48999999999998765 899999999999999999999753
No 229
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.2e-39 Score=361.41 Aligned_cols=211 Identities=27% Similarity=0.422 Sum_probs=179.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH-HhcccE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRFA 1301 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i~ 1301 (1459)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 578999999964 36999999999999999999999999999999999999999999999999998877654 467899
Q ss_pred EEeCCCcCCCc-cHHHhcCcCC-CC--ChHHHHHHHHHhcHHHHHHhCC-CchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFH-MN--DDLKIWSVLEKCHVKEEVEAVG-LETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~-~~--~d~ei~~aL~~~~l~~~i~~lG-Ldt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
|+||++.+|++ |+++|+.... .. .+++. ..+.++.++ ++........+||||||||++||||++++|
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~--------~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKI--------PDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHH--------HHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 9999996432 11 11111 112222222 444455666689999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
+++||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|+++++|++++.|+++++.
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999988653 7899999999999986 8999999999999999999983
No 230
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=369.12 Aligned_cols=219 Identities=28% Similarity=0.486 Sum_probs=184.5
Q ss_pred cEEEEEEEEEecCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCC----ChH
Q 000503 1222 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~ 1294 (1459)
.|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997422 3699999999999999999999999999999999999999999999999998653 245
Q ss_pred HHhcccEEEeCCC--cCCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHH
Q 000503 1295 DLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICL 1368 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp--~lf~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQrl~L 1368 (1459)
..|++++|+||+| .+|+.|++||+.+.. ..+.++..+ ...+.++.+|++. .......+||||||||++|
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~l 156 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKVGLSEDLISKSPFELSGGQMRRVAI 156 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCChhHhhCCcccCCHHHHHHHHH
Confidence 6788999999998 578889999996421 122222211 1234455557763 4566677899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
||||+++|++|||||||++||+++.+.+.+.|++.. ++.|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 157 aral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13641 157 AGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFSD 235 (287)
T ss_pred HHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998764 47899999999999865 899999999999999999998764
No 231
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=343.78 Aligned_cols=203 Identities=25% Similarity=0.371 Sum_probs=171.9
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
|+++|++..|.. ..+++|+||+|++||+++++|||||||||+|++|.+.++|++|+|.++|
T Consensus 2 I~~~nvsk~y~~------~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr 75 (309)
T COG1125 2 IEFENVSKRYGN------KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRR 75 (309)
T ss_pred ceeeeeehhcCC------ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHH
Confidence 678999998862 3459999999999999999999999999999999999999999999987
Q ss_pred cEEEEcCCCCCCC-CCHHHHhccCC---CCCHH----HHHHHHHHhcchh-hHhhccCCCcccccCCCcccCcHHHHHHH
Q 000503 673 SIAYVPQVPWILS-GTIRDNILFGK---NYDPQ----SYSETLKACTLDV-DISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1459)
Q Consensus 673 ~i~y~~Q~~~l~~-~ti~~nI~~g~---~~~~~----~~~~v~~~~~l~~-di~~~~~gd~t~ig~~g~~LSGGQkqRva 743 (1459)
+||||-|+.-||. .||.|||..-. .++++ +.++.++..+|+. +. .......|||||+|||.
T Consensus 76 ~IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~----------~~RyP~eLSGGQQQRVG 145 (309)
T COG1125 76 KIGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEY----------ADRYPHELSGGQQQRVG 145 (309)
T ss_pred hhhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHH----------hhcCchhcCcchhhHHH
Confidence 6999999999885 59999998642 35654 4556666677754 22 23455699999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcch-hhcCCEEEEEeCCeEEEecCHHHHHh
Q 000503 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~-l~~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
+||||..+|+|+|+||||+||||-+.+.+-+....-...-++|+|+|||+++. ++-||||.+|++|+|+..++++++..
T Consensus 146 v~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 146 VARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999888766432223347899999999987 45699999999999999999999986
Q ss_pred cc
Q 000503 823 SL 824 (1459)
Q Consensus 823 ~~ 824 (1459)
+.
T Consensus 226 ~P 227 (309)
T COG1125 226 NP 227 (309)
T ss_pred Cc
Confidence 53
No 232
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-38 Score=364.23 Aligned_cols=219 Identities=27% Similarity=0.440 Sum_probs=183.5
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCC--CChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1294 (1459)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5999999999963 469999999999999999999999999999999999865 789999999999865 3445
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCCC-C---C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM-N---D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~~-~---~----d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
.+|++++|+||+|.+|++|+++|+..... . . ++.+.++++..++.+. +....+....+||||||||+
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LSgGq~qrl 173 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDE-----VKDRLHSSALSLSGGQQQRL 173 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcc-----hHHHHhcCcccCCHHHHHHH
Confidence 67889999999999999999999864311 1 1 1223333333332211 12334566778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+|||||+++|+||||||||++||..+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++..+
T Consensus 174 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 253 (268)
T PRK14248 174 CIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFTS 253 (268)
T ss_pred HHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988667899999999998865 899999999999999999999876
Q ss_pred CC
Q 000503 1446 EC 1447 (1459)
Q Consensus 1446 ~~ 1447 (1459)
+.
T Consensus 254 ~~ 255 (268)
T PRK14248 254 PK 255 (268)
T ss_pred CC
Confidence 43
No 233
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=365.71 Aligned_cols=221 Identities=28% Similarity=0.403 Sum_probs=186.8
Q ss_pred CccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCC--CC
Q 000503 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TP 1292 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~ 1292 (1459)
.+.++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 23 ~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 23 QTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred CcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 457999999999964 3699999999999999999999999999999999999884 89999999999875 34
Q ss_pred hHHHhcccEEEeCCCcCCCccHHHhcCcCCC----CCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000503 1293 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1459)
Q Consensus 1293 ~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~----~~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQ 1364 (1459)
...+|++++|+||++.+|++|+++|+.+... ... +++.++++.+++.+.+ .+..+..+..|||||||
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~q 175 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEV-----KDRLHENAFGLSGGQQQ 175 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhH-----HHHhhCCcccCCHHHHH
Confidence 5678899999999999999999999964311 111 2233444444433221 13455667789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
|++||||++++|+|+||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 176 rv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 176 RLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTLF 255 (272)
T ss_pred HHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999875 8999999999999999999998
Q ss_pred ccCC
Q 000503 1444 QDEC 1447 (1459)
Q Consensus 1444 ~~~~ 1447 (1459)
+++.
T Consensus 256 ~~~~ 259 (272)
T PRK14236 256 TSPA 259 (272)
T ss_pred cCCC
Confidence 7543
No 234
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=363.12 Aligned_cols=219 Identities=27% Similarity=0.387 Sum_probs=185.6
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCC-----CceEEECCEeCCCC--ChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIINT--PVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~i--~~~ 1294 (1459)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 5899999999963 46999999999999999999999999999999999999997 69999999998653 456
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCCC----CCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~~----~~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
.+|++++|+||+|.+|+.|++||+.+... ... +.+.++++..++++.+ ....+..+.+||+|||||+
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LS~Gq~qrv 156 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEV-----KDNLHKSGLALSGGQQQRL 156 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhh-----hhHhhCCcccCCHHHHHHH
Confidence 78899999999999999999999975321 111 2233334444433222 2345566778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||++++|++|||||||++||..+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+++++..+
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14249 157 CIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFSR 236 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999887668999999999999987 699999999999999999999765
Q ss_pred CC
Q 000503 1446 EC 1447 (1459)
Q Consensus 1446 ~~ 1447 (1459)
+.
T Consensus 237 ~~ 238 (251)
T PRK14249 237 PR 238 (251)
T ss_pred CC
Confidence 43
No 235
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=363.29 Aligned_cols=221 Identities=23% Similarity=0.393 Sum_probs=187.9
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCC--CChHH
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVRD 1295 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~~ 1295 (1459)
++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.+++. .+...
T Consensus 4 l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 81 (250)
T PRK14266 4 IEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVE 81 (250)
T ss_pred EEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHH
Confidence 789999999964 359999999999999999999999999999999999874 489999999999875 34667
Q ss_pred HhcccEEEeCCCcCCCccHHHhcCcCC---CC-Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000503 1296 LRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1459)
Q Consensus 1296 lR~~i~~VpQdp~lf~gTIReNLdp~~---~~-~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~ 1367 (1459)
+|++++|+||+|.+|++|+++|+.+.. .. +. +++.++++.+++.+.+. ...+..+.+||+|||||++
T Consensus 82 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-----~~~~~~~~~LS~Gq~qrv~ 156 (250)
T PRK14266 82 LRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-----DKLDKSALGLSGGQQQRLC 156 (250)
T ss_pred HhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-----HHHhCCcccCCHHHHHHHH
Confidence 899999999999999999999997431 11 11 23444555555544332 2235566789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
||||++++|+||+|||||++||..+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++...+
T Consensus 157 laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~~~~ 236 (250)
T PRK14266 157 IARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIFINP 236 (250)
T ss_pred HHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHHhCC
Confidence 999999999999999999999999999999999988778999999999999887 7999999999999999999998776
Q ss_pred CcHH
Q 000503 1447 CSVF 1450 (1459)
Q Consensus 1447 ~~~f 1450 (1459)
.+.+
T Consensus 237 ~~~~ 240 (250)
T PRK14266 237 KDKR 240 (250)
T ss_pred CChH
Confidence 5544
No 236
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=9.2e-39 Score=359.73 Aligned_cols=211 Identities=26% Similarity=0.420 Sum_probs=176.2
Q ss_pred EEEEEEEEEecCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh---HHHh
Q 000503 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLR 1297 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR 1297 (1459)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 269999999999999999999999999999999999999999999999999988763 5778
Q ss_pred cccEEEeCCC--cCC-CccHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000503 1298 GRFAVVPQSP--FLF-EGSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1369 (1459)
Q Consensus 1298 ~~i~~VpQdp--~lf-~gTIReNLdp~----~~~~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQrQrl~LA 1369 (1459)
++++|+||+| .++ ..|+++|+... ....+++.. +.+ ..+.++.+|++ ...+....+||||||||++||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~---~~~-~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~la 157 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEAR---KEA-VLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIA 157 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHH---HHH-HHHHHHHCCCChhHhhCCchhcCHHHHHHHHHH
Confidence 8999999999 344 46999998532 111111111 110 12345555774 456777788999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
||++.+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 158 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 158 RALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999988754 7899999999999885 8999999999998765
No 237
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.8e-38 Score=371.63 Aligned_cols=226 Identities=25% Similarity=0.402 Sum_probs=185.2
Q ss_pred cEEEEEEEEEecCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCC---CceEEECCEeCCCCChHHH
Q 000503 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC---GGQILVDGLNIINTPVRDL 1296 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~---~G~I~IDG~di~~i~~~~l 1296 (1459)
.++++|++++|+.. ...+++||||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 58999999999632 246999999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----cccEEEeCCC--cCCC-ccHHHhcC----cCCCCChHHHHHHHHHhcHHHHHHhCCCc---hhhhcCCCCCChhH
Q 000503 1297 R----GRFAVVPQSP--FLFE-GSLRDNLD----PFHMNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVGQ 1362 (1459)
Q Consensus 1297 R----~~i~~VpQdp--~lf~-gTIReNLd----p~~~~~d~ei~~aL~~~~l~~~i~~lGLd---t~v~e~G~~LSgGQ 1362 (1459)
| ++|+|||||| .+++ -|+.+|+. .....+.++..+ ...+.++.+|++ ..++..+..|||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~-----~~~~~L~~vgL~~~~~~~~~~p~~LSgG~ 166 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFE-----ESVRMLDAVKMPEARKRMKMYPHEFSGGM 166 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCCChHHHhcCCcccCCHHH
Confidence 4 4799999999 4555 37777662 222222222111 112223333554 23566777899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecCh
Q 000503 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1439 (1459)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1439 (1459)
|||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||.+|+|+|.|++
T Consensus 167 ~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~ 246 (330)
T PRK09473 167 RQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNA 246 (330)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987643 7899999999999975 899999999999999999
Q ss_pred hHHhccCCcHHHH
Q 000503 1440 QTLLQDECSVFSS 1452 (1459)
Q Consensus 1440 ~eLl~~~~~~f~~ 1452 (1459)
+++.+++...|.+
T Consensus 247 ~~i~~~p~~pyt~ 259 (330)
T PRK09473 247 RDVFYQPSHPYSI 259 (330)
T ss_pred HHHHhCCCCHHHH
Confidence 9999887655555
No 238
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=362.42 Aligned_cols=218 Identities=28% Similarity=0.410 Sum_probs=184.6
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCCC--ChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1294 (1459)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999963 4699999999999999999999999999999999999875 799999999999753 345
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCCC---C-Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~~---~-~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
.+|++++|+||++.+|+.|+++|+.+... . +. +++.++++.+++.+.+ ....+.....||+|||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv 156 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEV-----KDDLKKSALKLSGGQQQRL 156 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhh-----hhHhhCCcccCCHHHHHHH
Confidence 67889999999999999999999974321 1 11 2233444444432211 2234556678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||++++|+||||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|+++++..+
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14270 157 CIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIFLE 236 (251)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999987777999999999999876 899999999999999999999865
Q ss_pred C
Q 000503 1446 E 1446 (1459)
Q Consensus 1446 ~ 1446 (1459)
+
T Consensus 237 ~ 237 (251)
T PRK14270 237 P 237 (251)
T ss_pred C
Confidence 4
No 239
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-39 Score=358.39 Aligned_cols=207 Identities=30% Similarity=0.381 Sum_probs=173.8
Q ss_pred EEEEEEEEEecCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999996421 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEeCCCcCCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1301 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1301 ~~VpQdp~lf~-gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+|+||+|.+|+ .|+++|+.+... ...++. .....+.++.+|++........+||||||||++|||||+++|
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p 150 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEA-----RERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDP 150 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999987 699999864311 111111 112234444556666666666789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEe--CCeEEEecCh
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILD--HGHLVEQGNP 1439 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~--~G~IvE~G~p 1439 (1459)
+++||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|+ +|+++|.++.
T Consensus 151 ~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 151 DVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999998763 37899999999998865 89999999 7999998765
No 240
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=364.99 Aligned_cols=221 Identities=24% Similarity=0.355 Sum_probs=186.2
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCC--CCh
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1293 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1293 (1459)
+.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 36999999999964 3599999999999999999999999999999999999985 48999999999864 445
Q ss_pred HHHhcccEEEeCCCcCCCccHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000503 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp~lf~gTIReNLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQr 1365 (1459)
..+|++++|+||+|.+|+.|++||+.+.. ...+ +.+.++++.+++.+.+ ....+..+..||+|||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LS~G~~qr 158 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-----KDKLNKSALGLSGGQQQR 158 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-----hhHhcCCcccCCHHHHHH
Confidence 67888999999999999999999996421 1121 2234455555543322 223445566899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe-----CCeEEEecCh
Q 000503 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD-----HGHLVEQGNP 1439 (1459)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~-----~G~IvE~G~p 1439 (1459)
++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||++++|+ +|++++.|++
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 159 LCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGVT 238 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCCH
Confidence 99999999999999999999999999999999999987777999999999999876 89999997 5999999999
Q ss_pred hHHhccCCc
Q 000503 1440 QTLLQDECS 1448 (1459)
Q Consensus 1440 ~eLl~~~~~ 1448 (1459)
+++.+++..
T Consensus 239 ~~~~~~~~~ 247 (259)
T PRK14260 239 TQIFSNPLD 247 (259)
T ss_pred HHHhcCCCC
Confidence 999876543
No 241
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=8.4e-39 Score=353.67 Aligned_cols=198 Identities=27% Similarity=0.414 Sum_probs=168.7
Q ss_pred EEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000503 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1459)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1459)
+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 469999999999999999999999999999999999999999999999999864 4567889999
Q ss_pred eCCC--cCCCccHHHhcCcCCC-C--ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1304 PQSP--FLFEGSLRDNLDPFHM-N--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1304 pQdp--~lf~gTIReNLdp~~~-~--~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
||+| .+|+.|++||+..... . .++++.++++.+ |++.........||||||||++||||++++|++
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 147 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDL---------DLYALKERHPLSLSGGQKQRLAIAAALLSGKDL 147 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHc---------CCchhcCCCchhCCHHHHHHHHHHHHHHhCCCE
Confidence 9998 4678899999975422 1 122344444444 454444555567999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhHhh-cCEEEEEeCCeEE
Q 000503 1379 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLN-MDEILILDHGHLV 1434 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~-~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~Iv 1434 (1459)
|+|||||++||+++.+.+.+.|++. .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 148 LIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999876 357899999999999976 8999999999985
No 242
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=371.46 Aligned_cols=226 Identities=19% Similarity=0.319 Sum_probs=182.7
Q ss_pred cEEEEEEEEEecCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC----CCCceEEECCEeCCCCChHH
Q 000503 1222 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP----ICGGQILVDGLNIINTPVRD 1295 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~----~~~G~I~IDG~di~~i~~~~ 1295 (1459)
.++++|++++|+... ..+|+||||+|++||.+||+|+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 379999999997532 359999999999999999999999999999999999997 48999999999999988776
Q ss_pred Hhc----ccEEEeCCCc--CCCc-cHHHhc----CcCCCCChHHHHHHHHHhcHHHHHHhCCCc---hhhhcCCCCCChh
Q 000503 1296 LRG----RFAVVPQSPF--LFEG-SLRDNL----DPFHMNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVG 1361 (1459)
Q Consensus 1296 lR~----~i~~VpQdp~--lf~g-TIReNL----dp~~~~~d~ei~~aL~~~~l~~~i~~lGLd---t~v~e~G~~LSgG 1361 (1459)
+|+ ++++|||+|. +.+. |+.+|+ ........++.. ....+.++.+|++ ...+.....||||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~-----~~~~~~L~~~gL~~~~~~l~~~p~~LSgG 157 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRR-----QRAIDLLNQVGIPDPASRLDVYPHQLSGG 157 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHCCCCChHHHHhCCchhCCHH
Confidence 543 6999999995 4432 565544 322111211111 1122333444554 2356667789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecC
Q 000503 1362 QRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1438 (1459)
Q Consensus 1362 QrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~ 1438 (1459)
||||++|||||+.+|++||+||||++||..+...+.+.|++.. .+.|+|+|||+++.+.. ||||+||.+|+|+|.|+
T Consensus 158 q~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~ 237 (326)
T PRK11022 158 MSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGK 237 (326)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999999999998864 37899999999999864 89999999999999999
Q ss_pred hhHHhccCCcHHHH
Q 000503 1439 PQTLLQDECSVFSS 1452 (1459)
Q Consensus 1439 p~eLl~~~~~~f~~ 1452 (1459)
++++++++...|.+
T Consensus 238 ~~~~~~~p~hpyt~ 251 (326)
T PRK11022 238 AHDIFRAPRHPYTQ 251 (326)
T ss_pred HHHHhhCCCChHHH
Confidence 99999877655554
No 243
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-38 Score=362.99 Aligned_cols=219 Identities=24% Similarity=0.361 Sum_probs=186.4
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCC--CChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1294 (1459)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 4899999999964 369999999999999999999999999999999999986 479999999999853 4566
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCCC---C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1368 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~~---~---~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~L 1368 (1459)
.+|++++++||+|.+|+.|+++|+.+... . .++++.++++.+++.+.+. ...+..+.+||||||||++|
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-----~~~~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-----DKLKQSGLSLSGGQQQRLCI 162 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-----HHhcCCcccCCHHHHHHHHH
Confidence 78899999999999998999999975321 1 1233444556555544332 23455667899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe---------CCeEEEecC
Q 000503 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD---------HGHLVEQGN 1438 (1459)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~---------~G~IvE~G~ 1438 (1459)
|||++++|+||||||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||||++|+ +|++++.|+
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~ 242 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEFDR 242 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEeCC
Confidence 99999999999999999999999999999999987777899999999999876 79999998 899999999
Q ss_pred hhHHhccCC
Q 000503 1439 PQTLLQDEC 1447 (1459)
Q Consensus 1439 p~eLl~~~~ 1447 (1459)
++|+.+++.
T Consensus 243 ~~~~~~~~~ 251 (264)
T PRK14243 243 TEKIFNSPQ 251 (264)
T ss_pred HHHHHhCCC
Confidence 999987654
No 244
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=362.93 Aligned_cols=226 Identities=24% Similarity=0.383 Sum_probs=188.6
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCCC--ChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1294 (1459)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.+. +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 4899999999963 4699999999999999999999999999999999999763 489999999999876 456
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCCCC----C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMN----D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~~~----~----d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
..|++++|+||+|.+|++|++||+.+.... . ++++.++++.+++.+ ++.+..+..+.+||+|||||+
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS~G~~qrv 158 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWD-----EVKDRLHDSALSLSGGQQQRL 158 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCch-----hhHHHhhcChhhCCHHHHHHH
Confidence 778899999999999999999999753211 1 112333334333322 123345667778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||++.+|+++||||||++||.++.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 159 ~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 238 (253)
T PRK14261 159 CIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIFEN 238 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHHhC
Confidence 9999999999999999999999999999999999987777999999999999975 899999999999999999999876
Q ss_pred CCcHHHHHH
Q 000503 1446 ECSVFSSFV 1454 (1459)
Q Consensus 1446 ~~~~f~~l~ 1454 (1459)
+...+.+.+
T Consensus 239 ~~~~~~~~~ 247 (253)
T PRK14261 239 PHEELTENY 247 (253)
T ss_pred CCcHHHHHH
Confidence 544444443
No 245
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.3e-38 Score=372.36 Aligned_cols=216 Identities=28% Similarity=0.397 Sum_probs=183.3
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999964 3599999999999999999999999999999999999999999999999998764 356789999
Q ss_pred EEeCCCcCCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1302 VVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1302 ~VpQdp~lf~-gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
|+||++.+++ .|+++|+..+. ..++.+..+. +.+.++.+|++.........||||||||++|||||+++|+
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~ 155 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQ 155 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999886 59999996321 1222222221 1223344466555555566899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 156 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 156 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999998764 47899999999999976 899999999999999999999754
No 246
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-38 Score=363.32 Aligned_cols=221 Identities=24% Similarity=0.363 Sum_probs=186.4
Q ss_pred CccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCC--CC
Q 000503 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TP 1292 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~ 1292 (1459)
.-.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 22 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred ceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 346999999999964 359999999999999999999999999999999999987 699999999999853 45
Q ss_pred hHHHhcccEEEeCCCcCCCccHHHhcCcCC---CCChH-----HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000503 1293 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDL-----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1459)
Q Consensus 1293 ~~~lR~~i~~VpQdp~lf~gTIReNLdp~~---~~~d~-----ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQ 1364 (1459)
...+|++++|+||+|.+|..|+++|+.+.. ...++ .+.++++..++.+ ++....+..+..|||||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~l~~~~~~~~~~LSgGe~q 174 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-----ELKDRLHDNAYGLSGGQQQ 174 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-----hHHHHHhcCcccCCHHHHH
Confidence 567889999999999999999999997421 11221 1223333332211 2334456677789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 175 rv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 175 RLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999888778999999999999876 8999999999999999999998
Q ss_pred ccCC
Q 000503 1444 QDEC 1447 (1459)
Q Consensus 1444 ~~~~ 1447 (1459)
+++.
T Consensus 255 ~~~~ 258 (271)
T PRK14238 255 SNPS 258 (271)
T ss_pred cCCC
Confidence 7654
No 247
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.6e-38 Score=371.00 Aligned_cols=215 Identities=27% Similarity=0.386 Sum_probs=187.7
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|++ ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.. +...+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999963 469999999999999999999999999999999999999999999999999977 44678899999
Q ss_pred EeCCCcCCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||+|.+|++ |++||+.+... ...++..+ ...+.++.+|++...+....+||+|||||++|||||+++|++
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKV 154 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999987 99999964321 12222111 123445555777777777788999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
|+|||||++||+.+.+.+++.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 155 liLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 155 LILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999988778999999999999887 899999999999999999999764
No 248
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.1e-38 Score=354.98 Aligned_cols=206 Identities=27% Similarity=0.414 Sum_probs=174.7
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++|
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999964 3699999999999999999999999999999999999999999999999999766543 568999
Q ss_pred EeCCCcCCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf~-gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||++.+|. .|+++|+..... ...++..+ .+.+.++.+|++.........||||||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 151 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKV 151 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 599999965311 12222111 123334445676666667778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
++|||||++||+++.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|++++.|
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 152 FLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999998764 37899999999999876 8999999999999876
No 249
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.6e-38 Score=374.35 Aligned_cols=216 Identities=28% Similarity=0.425 Sum_probs=184.2
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++|++++|++ ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+ ...|++++
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999997654 56789999
Q ss_pred EEeCCCcCCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1302 VVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1302 ~VpQdp~lf~-gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
|+||++.++. .|++||+.++.. .+..+..+. ..+.++.+|++........+||+|||||++|||||+.+|+
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~ 192 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDPQ 192 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999875 599999975321 122222111 1233444466655555566899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 193 lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 193 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999998864 48999999999999976 999999999999999999999764
No 250
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=367.22 Aligned_cols=219 Identities=26% Similarity=0.439 Sum_probs=185.0
Q ss_pred cEEEEEEEEEecCC----CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCC-hHHH
Q 000503 1222 LIEFQNVTMRYKPS----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDL 1296 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~----~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~l 1296 (1459)
-++++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 48999999999642 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcccEEEeCCCc--CCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1297 RGRFAVVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1297 R~~i~~VpQdp~--lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
|++++|+||+|. +|..|+++|+.+... .+..+..+ .+.+.++.+|++.........||||||||++||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~lara 158 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRE-----RVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGI 158 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHH-----HHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHH
Confidence 899999999984 676789999965321 12222111 12233344466555666667899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHhcc
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
|+++|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..|||+++|++|++++.|+++++.++
T Consensus 159 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 159 LAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999998764 38999999999999988999999999999999999999764
No 251
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=363.97 Aligned_cols=223 Identities=23% Similarity=0.343 Sum_probs=190.0
Q ss_pred CCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCC--
Q 000503 1217 WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII-- 1289 (1459)
Q Consensus 1217 wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~-- 1289 (1459)
-|.++.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 11 ~~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~ 88 (265)
T PRK14252 11 SPTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNIL 88 (265)
T ss_pred cCCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccc
Confidence 456788999999999964 3699999999999999999999999999999999999975 7999999998874
Q ss_pred --CCChHHHhcccEEEeCCCcCCCccHHHhcCcCCC---C-----ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCC
Q 000503 1290 --NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFS 1359 (1459)
Q Consensus 1290 --~i~~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~---~-----~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LS 1359 (1459)
......+|++++|+||+|.+|.+|+++|+..... . .++++.++++.+++.+ ++....+.....||
T Consensus 89 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS 163 (265)
T PRK14252 89 SPEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-----EVKDRLGDLAFNLS 163 (265)
T ss_pred ccccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-----hhhHHHhCCcccCC
Confidence 3345678899999999999999999999964311 1 1244555555555432 22344556677899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecC
Q 000503 1360 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1438 (1459)
Q Consensus 1360 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~ 1438 (1459)
+|||||++||||++++|+++||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999987767899999999999975 89999999999999999
Q ss_pred hhHHhccC
Q 000503 1439 PQTLLQDE 1446 (1459)
Q Consensus 1439 p~eLl~~~ 1446 (1459)
++++..++
T Consensus 244 ~~~~~~~~ 251 (265)
T PRK14252 244 TDTIFIKP 251 (265)
T ss_pred HHHHHhCC
Confidence 99997654
No 252
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-38 Score=360.56 Aligned_cols=219 Identities=28% Similarity=0.419 Sum_probs=186.4
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCCCC-hHH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTP-VRD 1295 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i~-~~~ 1295 (1459)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 5899999999964 4699999999999999999999999999999999999986 6999999999998763 456
Q ss_pred HhcccEEEeCCCcCCCccHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCc----hhhhcCCCCCChhHHHHHH
Q 000503 1296 LRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQLIC 1367 (1459)
Q Consensus 1296 lR~~i~~VpQdp~lf~gTIReNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lGLd----t~v~e~G~~LSgGQrQrl~ 1367 (1459)
+|++++|+||+|.+|+.|+++|+.... ..+++++.+. ..+.++.+|++ +.+.....+||||||||++
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~ 173 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGV-----AQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLC 173 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHH
Confidence 788999999999999999999997431 1233333221 12233334443 3456667789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
||||++++|+||||||||++||..+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.+++
T Consensus 174 LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 253 (276)
T PRK14271 174 LARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSP 253 (276)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999999887667899999999999876 8999999999999999999998765
Q ss_pred C
Q 000503 1447 C 1447 (1459)
Q Consensus 1447 ~ 1447 (1459)
.
T Consensus 254 ~ 254 (276)
T PRK14271 254 K 254 (276)
T ss_pred C
Confidence 3
No 253
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-38 Score=365.14 Aligned_cols=220 Identities=26% Similarity=0.423 Sum_probs=184.4
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCCC--Ch
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--PV 1293 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i--~~ 1293 (1459)
..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +.
T Consensus 38 ~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 35899999999964 369999999999999999999999999999999999997 6899999999998653 45
Q ss_pred HHHhcccEEEeCCCcCCCccHHHhcCcCCC---CC---hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000503 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp~lf~gTIReNLdp~~~---~~---d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~ 1367 (1459)
..+|++++|+||++.+|++|+++|+..... .. ++++.++++..++.+.+ ....+....+||||||||++
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LSgGe~qrv~ 190 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEV-----KDQLDSSGLDLSGGQQQRLC 190 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchh-----HHHHhCCcccCCHHHHHHHH
Confidence 678899999999999999999999964211 11 22334444444332111 12345667789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEE-EEeCCeEEEecChhHHhcc
Q 000503 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEIL-ILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIl-Vl~~G~IvE~G~p~eLl~~ 1445 (1459)
|||||+++|+||||||||++||.++.+.+.+.|++..+++|||+++|+++.+.. |||++ +|++|+|++.|+++++.++
T Consensus 191 LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~~~ 270 (285)
T PRK14254 191 IARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIFEN 270 (285)
T ss_pred HHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999988777899999999999876 89975 5799999999999999875
Q ss_pred CC
Q 000503 1446 EC 1447 (1459)
Q Consensus 1446 ~~ 1447 (1459)
+.
T Consensus 271 ~~ 272 (285)
T PRK14254 271 PE 272 (285)
T ss_pred cC
Confidence 43
No 254
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-38 Score=377.91 Aligned_cols=208 Identities=27% Similarity=0.400 Sum_probs=176.8
Q ss_pred ccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH----hcccEEEeCCCcCCCc-
Q 000503 1238 AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGRFAVVPQSPFLFEG- 1312 (1459)
Q Consensus 1238 ~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~i~~VpQdp~lf~g- 1312 (1459)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.|+.+.+...+ |++++|+||++.+|+.
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998876654 4689999999999975
Q ss_pred cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCC
Q 000503 1313 SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVD 1389 (1459)
Q Consensus 1313 TIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD 1389 (1459)
|++||+.+.. ..+.++..+ ...+.++.+|++........+||||||||++|||||+.+|+||||||||++||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD 196 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERRE-----KALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALD 196 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCC
Confidence 9999997532 112222111 12334445577666666777899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000503 1390 AQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1450 (1459)
Q Consensus 1390 ~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1450 (1459)
+.+.+.+++.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+|++++.++...|
T Consensus 197 ~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 197 PLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred HHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999998764 48999999999999865 89999999999999999999988664433
No 255
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=8.3e-39 Score=354.63 Aligned_cols=202 Identities=27% Similarity=0.407 Sum_probs=173.8
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++... ..+|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999953 4699999999999999999999999999999999999999999999999998764 567889999
Q ss_pred EeCCCcCCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf~-gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||++.+|+ .|++||+.+.. ..+++++.++++..++ +.........||||||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l---------~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 147 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGL---------KDSAKKKVKGFSLGMKQRLGIALALLGNPDL 147 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCC---------HHHHhhhHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998885 69999996532 1233445555555544 4444445567999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
+||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 148 LILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998764 47899999999999876 8999999999999865
No 256
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.7e-38 Score=357.27 Aligned_cols=215 Identities=28% Similarity=0.410 Sum_probs=182.9
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++|
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999964 369999999999999999999999999999999999999999999999999987653 4788999
Q ss_pred EeCCCcCCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||+|.+|++ |+++|+..... .+..+. ...+.+.++.+|+.........+||+||+||++||||++++|++
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~l 151 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKI-----KARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQV 151 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHH-----HHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999986 99999964321 111111 11224445555665555556678999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1379 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
+||||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.+
T Consensus 152 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~ 222 (237)
T TIGR00968 152 LLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDHP 222 (237)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcCC
Confidence 999999999999999999999987643 7999999999999876 8999999999999999999998654
No 257
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.4e-38 Score=359.67 Aligned_cols=225 Identities=23% Similarity=0.385 Sum_probs=187.9
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEe-----CCCCChHH-
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN-----IINTPVRD- 1295 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~d-----i~~i~~~~- 1295 (1459)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 4899999999964 369999999999999999999999999999999999999999999999999 87776654
Q ss_pred ---HhcccEEEeCCCc--CCC-ccHHHhcCc----CCCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000503 1296 ---LRGRFAVVPQSPF--LFE-GSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1364 (1459)
Q Consensus 1296 ---lR~~i~~VpQdp~--lf~-gTIReNLdp----~~~~~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQrQ 1364 (1459)
.|+.++|+||+|. ++. .|+++|+.. .......++. ....+.++.+|++ +..+..+.+|||||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~q 158 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIR-----ATAGDWLERVEIDAARIDDLPTTFSGGMQQ 158 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHH-----HHHHHHHHHcCCChhHHhCCCccCCHHHHH
Confidence 3567999999984 343 478888742 1111111221 1234566666886 4678888899999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhH
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1441 (1459)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1441 (1459)
|++||||++++|+||||||||++||+++.+.+.+.|++..+ +.|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 159 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 238 (258)
T PRK11701 159 RLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQ 238 (258)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999985 89999999999999999999
Q ss_pred HhccCCcHHHHH
Q 000503 1442 LLQDECSVFSSF 1453 (1459)
Q Consensus 1442 Ll~~~~~~f~~l 1453 (1459)
+..++...|.+.
T Consensus 239 ~~~~~~~~~~~~ 250 (258)
T PRK11701 239 VLDDPQHPYTQL 250 (258)
T ss_pred HhcCCCCHHHHH
Confidence 987665445543
No 258
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.2e-38 Score=355.06 Aligned_cols=205 Identities=31% Similarity=0.391 Sum_probs=171.8
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh---HHHhcc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1299 (1459)
++++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 469999999999999999999999999999999999999999999999999987654 357889
Q ss_pred cEEEeCCCcCCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1300 FAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1300 i~~VpQdp~lf~g-TIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
++++||+|.+|++ |+++|+.... ..+.++..+ .+.+.++.+|++........+||||||||++||||++++
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 154 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK-----RVPAALELVGLSHKHRALPAELSGGEQQRVAIARAIVNS 154 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHHcC
Confidence 9999999999985 9999996431 112111111 122334444665555555668999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeE
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1433 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~I 1433 (1459)
|+|+||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 155 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 155 PTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999998863 57999999999999986 899999999974
No 259
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-38 Score=362.73 Aligned_cols=216 Identities=25% Similarity=0.403 Sum_probs=185.0
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999988888888889999
Q ss_pred EeCCCcCCCc-cHHHhcCcCCC-----CC--hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFHM-----ND--DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~~-----~~--d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
+||++.++++ |+++|+++... .. +++. .....+.++.+|++.........||||||||++||||+++
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~ 155 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAED-----NARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQ 155 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHH-----HHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhc
Confidence 9999998877 99999975311 00 1110 1112233333466555566677899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 156 ~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 156 DTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 999999999999999999999999998764 47899999999999875 899999999999999999998753
No 260
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-38 Score=364.14 Aligned_cols=217 Identities=26% Similarity=0.433 Sum_probs=182.2
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCC--CChHHHhccc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRF 1300 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~--i~~~~lR~~i 1300 (1459)
|+++||+++|+. ..++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 2 l~~~~l~~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPD-GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 789999999963 2469999999999999999999999999999999999999999999999999853 3345678999
Q ss_pred EEEeCCC--cCCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1301 AVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1301 ~~VpQdp--~lf~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
+|+||+| .+|+.|++||+.... ..+.++..+ ...+.++.+|++.........||||||||++||||++++
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~laral~~~ 155 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK-----RVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMK 155 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998 578899999996421 112222111 122334444555445555668999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++++++.
T Consensus 156 p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 156 PEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999998764 47899999999999875 899999999999999999998764
No 261
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=364.17 Aligned_cols=213 Identities=27% Similarity=0.402 Sum_probs=183.7
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999963 36999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCC--------C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHM--------N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~--------~---~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LA 1369 (1459)
|+||++.++.+ |+++|+..... . .++++.++++.+ |++........+||||||||++||
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgG~~qrv~la 159 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLV---------GLKPLAHRLVDSLSGGERQRAWIA 159 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc---------CCHHHhcCCcccCCHHHHHHHHHH
Confidence 99999877665 99999974311 0 112333444444 454444555568999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
||++.+|+||||||||++||..+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 160 ral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~~ 238 (265)
T PRK10575 160 MLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMRG 238 (265)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcCH
Confidence 99999999999999999999999999999998764 37999999999999865 899999999999999999998753
No 262
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=2.1e-38 Score=340.47 Aligned_cols=172 Identities=35% Similarity=0.591 Sum_probs=162.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+....++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.+.+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000503 1303 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1459)
Q Consensus 1303 VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1459)
++|+|.+|++|+++|+ ||||||||++||||++++|++||||
T Consensus 81 ~~q~~~~~~~tv~~~l---------------------------------------LS~G~~qrv~la~al~~~p~~lllD 121 (173)
T cd03246 81 LPQDDELFSGSIAENI---------------------------------------LSGGQRQRLGLARALYGNPRILVLD 121 (173)
T ss_pred ECCCCccccCcHHHHC---------------------------------------cCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999998 9999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCeE
Q 000503 1383 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHL 1433 (1459)
Q Consensus 1383 EaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~~G~I 1433 (1459)
|||++||+.+.+.+.+.|++.. +++|+|+++|+++.+..||+|++|++|++
T Consensus 122 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 122 EPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred CCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 9999999999999999998764 47899999999999988999999999975
No 263
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=364.45 Aligned_cols=217 Identities=24% Similarity=0.352 Sum_probs=181.3
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCC--CCChHHHhccc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--NTPVRDLRGRF 1300 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~--~i~~~~lR~~i 1300 (1459)
++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 689999999963 46999999999999999999999999999999999999999999999999985 34456778899
Q ss_pred EEEeCCCc--CCCccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1301 AVVPQSPF--LFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1301 ~~VpQdp~--lf~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
+|+||+|. ++..|+.+|+.... ..++++..+ .+.+.++.+|++........+||||||||++|||||+.+
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~ 154 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITR-----RVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQ 154 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcC
Confidence 99999985 57789999986421 112222211 122233334555444555668999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|+++++....
T Consensus 155 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (271)
T PRK13638 155 ARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFACT 227 (271)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCh
Confidence 99999999999999999999999998764 47899999999999965 8999999999999999999987643
No 264
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.9e-38 Score=374.19 Aligned_cols=209 Identities=25% Similarity=0.387 Sum_probs=175.1
Q ss_pred ccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCE----eCCCCChHHH---h-cccEEEeCCCcC
Q 000503 1238 AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL----NIINTPVRDL---R-GRFAVVPQSPFL 1309 (1459)
Q Consensus 1238 ~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~----di~~i~~~~l---R-~~i~~VpQdp~l 1309 (1459)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||. |+...+.+.+ | ++++||||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5799999999999999999999999999999999999999999999996 6777765554 3 589999999999
Q ss_pred CC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccC
Q 000503 1310 FE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1385 (1459)
Q Consensus 1310 f~-gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaT 1385 (1459)
|+ .|++||+.+... .+.++. +....+.++.+||+........+||||||||++|||||+++|+||||||||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~-----~~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPt 192 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAER-----RKRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPF 192 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 98 699999975321 122211 112233444456665566666789999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000503 1386 ANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1451 (1459)
Q Consensus 1386 S~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1451 (1459)
|+||+.+.+.+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|++++.++...|.
T Consensus 193 s~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~ 261 (382)
T TIGR03415 193 SALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYV 261 (382)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHH
Confidence 99999999999999987643 7999999999999755 899999999999999999999977644333
No 265
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-38 Score=360.98 Aligned_cols=220 Identities=23% Similarity=0.366 Sum_probs=187.0
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hccc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1300 (1459)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5899999999963 469999999999999999999999999999999999999999999999999988876554 4569
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCC-----------CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHM-----------ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~-----------~~----d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQ 1364 (1459)
+|+||+|.+|++ |+++|+.+... .. +.+..+. .....+.++.+|++...+....+|||||||
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gl~~~~~~~~~~LS~G~~q 160 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEA--LDRAATWLERVGLLEHANRQAGNLAYGQQR 160 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHH--HHHHHHHHHhCChhhhhhCChhhCCHHHHH
Confidence 999999999986 99999975311 00 0000011 112334555568877778888899999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhH
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1441 (1459)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1441 (1459)
|++||||++++|+||||||||++||..+.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|++++.|++++
T Consensus 161 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 240 (255)
T PRK11300 161 RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEE 240 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999876 89999999999999999999
Q ss_pred Hhcc
Q 000503 1442 LLQD 1445 (1459)
Q Consensus 1442 Ll~~ 1445 (1459)
+..+
T Consensus 241 ~~~~ 244 (255)
T PRK11300 241 IRNN 244 (255)
T ss_pred HhhC
Confidence 8754
No 266
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.3e-38 Score=351.12 Aligned_cols=201 Identities=25% Similarity=0.398 Sum_probs=170.9
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|.+|+|.. +++|+|+||++++|++++|+||||||||||||+|+|.++|.+|+|.++|
T Consensus 2 ~L~~~~ls~~y~~------~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelA 75 (258)
T COG1120 2 MLEVENLSFGYGG------KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELA 75 (258)
T ss_pred eeEEEEEEEEECC------eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHh
Confidence 3678999999973 3459999999999999999999999999999999999999999999998
Q ss_pred -cEEEEcCCCCCCCC-CHHHHhccCCC-C----------CHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHH
Q 000503 673 -SIAYVPQVPWILSG-TIRDNILFGKN-Y----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~~-ti~~nI~~g~~-~----------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 739 (1459)
.+||+||++....+ ||+|-+.+|+. + |++...++++.+++++-. ...-.+||||||
T Consensus 76 k~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGer 144 (258)
T COG1120 76 KKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGER 144 (258)
T ss_pred hhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHH
Confidence 59999999876554 99999999853 1 233455667777776432 234468999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchh-hcCCEEEEEeCCeEEEecCHH
Q 000503 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI-SAADMVVVMDKGQVKWIGSSA 818 (1459)
Q Consensus 740 qRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l-~~~d~i~~l~~G~i~~~g~~~ 818 (1459)
|||.|||||+++|+|++||||||+||....-++++.+..-...+|+|+|+|+|+++.. .+||++++|++|+++.+|+++
T Consensus 145 Qrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ 224 (258)
T COG1120 145 QRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPE 224 (258)
T ss_pred HHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcc
Confidence 9999999999999999999999999999999999874332235578999999999875 579999999999999999998
Q ss_pred HHHh
Q 000503 819 DLAV 822 (1459)
Q Consensus 819 ~l~~ 822 (1459)
|+..
T Consensus 225 evlT 228 (258)
T COG1120 225 EVLT 228 (258)
T ss_pred hhcC
Confidence 8754
No 267
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-38 Score=359.65 Aligned_cols=216 Identities=26% Similarity=0.370 Sum_probs=183.7
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 3 LEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred EEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EeCCCcC-CCccHHHhcCcCCC-C--ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc-----
Q 000503 1303 VPQSPFL-FEGSLRDNLDPFHM-N--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL----- 1373 (1459)
Q Consensus 1303 VpQdp~l-f~gTIReNLdp~~~-~--~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL----- 1373 (1459)
+||++.+ +..|++||+..... . +.++.. ....+.++.+|++.........||||||||++|||||+
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~~~~~~ 155 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDD-----ALVAAALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLAQLWEP 155 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccCCCcHHHH-----HHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccc
Confidence 9999987 56799999965321 1 111100 01223334446655556666789999999999999999
Q ss_pred -cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1374 -KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1374 -r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
++|++|||||||++||+++.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 156 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (258)
T PRK13548 156 DGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLTP 231 (258)
T ss_pred CCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhCh
Confidence 5999999999999999999999999998764 47899999999999875 899999999999999999998763
No 268
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-38 Score=359.72 Aligned_cols=222 Identities=24% Similarity=0.343 Sum_probs=187.7
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCC--CChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~~ 1294 (1459)
.+.+++.+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4889999999964 3699999999999999999999999999999999999986 79999999999864 3445
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCCC---C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1368 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~~---~---~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~L 1368 (1459)
.+|++++|+||+|.+|..|++||+.+... . .++++.++++.+++.+.+. ...++...+||+|||||++|
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-----~~~~~~~~~LS~G~~qrv~l 160 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVK-----DKLKVSGLSLSGGQQQRLCI 160 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhh-----hhhhCCcccCCHHHHHHHHH
Confidence 67889999999999999999999975421 1 1234555565555433221 23345667899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe--------CCeEEEecCh
Q 000503 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD--------HGHLVEQGNP 1439 (1459)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~--------~G~IvE~G~p 1439 (1459)
|||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.+ ||||++|+ +|++++.|++
T Consensus 161 aral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 161 ARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 99999999999999999999999999999999988778899999999999876 89999996 8999999999
Q ss_pred hHHhccCCcHH
Q 000503 1440 QTLLQDECSVF 1450 (1459)
Q Consensus 1440 ~eLl~~~~~~f 1450 (1459)
+++++++...+
T Consensus 241 ~~~~~~~~~~~ 251 (261)
T PRK14263 241 AQIFQNPREQL 251 (261)
T ss_pred HHHHhCCCcHH
Confidence 99987654333
No 269
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-38 Score=360.19 Aligned_cols=224 Identities=26% Similarity=0.410 Sum_probs=184.8
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCC-----CceEEECCEeCCC--CChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIIN--TPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~--i~~~ 1294 (1459)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 3789999999963 36999999999999999999999999999999999999874 8999999999875 3455
Q ss_pred HHhcccEEEeCCCcCCCc-cHHHhcCcCC---C-CChHHHHH----HHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---M-NDDLKIWS----VLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~g-TIReNLdp~~---~-~~d~ei~~----aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQr 1365 (1459)
.+|++++|+||+|.+|++ |+++|+.... . ..+++..+ .++..++++. +.........+||||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDE-----VKDRLKTPATGLSGGQQQR 156 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchh-----hhhhhcCCcccCCHHHHHH
Confidence 778899999999999985 9999996321 1 12222222 2223332221 1222344556899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
++||||++++|+||||||||++||..+.+.+.+.|++..+++|+|++||+++.+.+ ||||++|++|++++.|+++++++
T Consensus 157 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 236 (252)
T PRK14272 157 LCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLFT 236 (252)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987678999999999999986 89999999999999999999988
Q ss_pred cCCcHHHH
Q 000503 1445 DECSVFSS 1452 (1459)
Q Consensus 1445 ~~~~~f~~ 1452 (1459)
++...+.+
T Consensus 237 ~~~~~~~~ 244 (252)
T PRK14272 237 NPRDERTE 244 (252)
T ss_pred CcCcHHHH
Confidence 76544533
No 270
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-38 Score=361.23 Aligned_cols=219 Identities=24% Similarity=0.414 Sum_probs=182.5
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCC--CChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~~ 1294 (1459)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGS--FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECC--EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 4899999999964 3599999999999999999999999999999999999974 69999999999854 4456
Q ss_pred HHhcccEEEeCCCcCCC-ccHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFE-GSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~-gTIReNLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQr 1365 (1459)
.+|+.++++||++.+|+ .|+++|+.... ..+. +++.++++.+++.+.+ +........+||||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qr 156 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-----KDRLDKPGGGLSGGQQQR 156 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hhHhhCCcccCCHHHHHH
Confidence 78899999999999997 49999986421 1111 1233334444332111 234556667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe------CCeEEEecC
Q 000503 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD------HGHLVEQGN 1438 (1459)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~------~G~IvE~G~ 1438 (1459)
++||||++++|+++||||||++||..+.+.+.+.|++..+++|||+|||+++.+.. ||||++|+ +|+|++.|+
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~~ 236 (258)
T PRK14241 157 LCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEIDD 236 (258)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecCC
Confidence 99999999999999999999999999999999999887667899999999999865 89999996 899999999
Q ss_pred hhHHhccCC
Q 000503 1439 PQTLLQDEC 1447 (1459)
Q Consensus 1439 p~eLl~~~~ 1447 (1459)
+++++.++.
T Consensus 237 ~~~~~~~~~ 245 (258)
T PRK14241 237 TEKIFSNPT 245 (258)
T ss_pred HHHHHhCcC
Confidence 999987543
No 271
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-38 Score=358.81 Aligned_cols=219 Identities=25% Similarity=0.379 Sum_probs=184.9
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCC-CCChHH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII-NTPVRD 1295 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~-~i~~~~ 1295 (1459)
.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4889999999963 4699999999999999999999999999999999999986 5999999999986 456677
Q ss_pred HhcccEEEeCCCcCCCccHHHhcCcCCC---CC-h----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000503 1296 LRGRFAVVPQSPFLFEGSLRDNLDPFHM---ND-D----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1459)
Q Consensus 1296 lR~~i~~VpQdp~lf~gTIReNLdp~~~---~~-d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~ 1367 (1459)
+|+.++|+||+|.+|++|+++|+..... .. + +++.++++.+++.+. +....+.....||||||||++
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~LS~G~~qrv~ 155 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDE-----VKDRLKSHAFGLSGGQQQRLC 155 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchh-----hhHHhhcCcccCCHHHHHHHH
Confidence 8899999999999999999999974311 11 1 122333333333221 123445566789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
||||++.+|+||||||||++||..+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.+++
T Consensus 156 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 235 (249)
T PRK14253 156 IARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFSNP 235 (249)
T ss_pred HHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcCC
Confidence 999999999999999999999999999999999988777999999999999887 8999999999999999999997654
Q ss_pred C
Q 000503 1447 C 1447 (1459)
Q Consensus 1447 ~ 1447 (1459)
.
T Consensus 236 ~ 236 (249)
T PRK14253 236 K 236 (249)
T ss_pred C
Confidence 3
No 272
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-38 Score=361.80 Aligned_cols=221 Identities=22% Similarity=0.341 Sum_probs=185.8
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
-.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999964 3599999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEeCCCcCCC-ccHHHhcCcCC-CCChH--HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1301 AVVPQSPFLFE-GSLRDNLDPFH-MNDDL--KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1301 ~~VpQdp~lf~-gTIReNLdp~~-~~~d~--ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+|+||++.+|. .|+++|+.+.. ...+. ...+ .......+.++.+|++.........||||||||++||||++++|
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~p 162 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRK-EDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQET 162 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCH-HHHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHHHHhcCC
Confidence 99999998875 59999997531 10000 0000 00111233344446655566677789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
++|||||||++||+++.+.+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 163 ~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 163 AIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 99999999999999999999999988643 7899999999998876 89999999999999999999875
No 273
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-38 Score=364.97 Aligned_cols=225 Identities=24% Similarity=0.345 Sum_probs=185.6
Q ss_pred CccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCCC--C
Q 000503 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1292 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i--~ 1292 (1459)
...|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +
T Consensus 37 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 346899999999964 359999999999999999999999999999999999864 4999999999998643 3
Q ss_pred hHHHhcccEEEeCCCcCCCccHHHhcCcCCC---C-Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000503 1293 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1459)
Q Consensus 1293 ~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~---~-~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQ 1364 (1459)
...+|++++|+||+|.+|++|++||+.+... . +. +++.++++..++.+. +..........|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LSgGq~q 189 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDE-----VSDRLDKNALGLSGGQQQ 189 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccc-----hhhHhhCChhhCCHHHHH
Confidence 3467889999999999999999999974311 1 11 123334444333211 122345556689999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
|++|||||+++|++|||||||++||.++.+.+.+.|++..+++|||+++|+++.+.+ ||||++|++|++++.|+++++.
T Consensus 190 rv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 190 RLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999876 8999999999999999999998
Q ss_pred ccCCcHHH
Q 000503 1444 QDECSVFS 1451 (1459)
Q Consensus 1444 ~~~~~~f~ 1451 (1459)
+++...+.
T Consensus 270 ~~~~~~~~ 277 (286)
T PRK14275 270 TNPKDRMT 277 (286)
T ss_pred hCCCcHHH
Confidence 76554343
No 274
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-38 Score=354.75 Aligned_cols=217 Identities=27% Similarity=0.395 Sum_probs=183.9
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+. .++++|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.+++
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 478999999964 369999999999999999999999999999999999999999999999999987664 3678999
Q ss_pred EeCCCcCCCc-cHHHhcCcCCC-C-ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFHM-N-DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~~-~-~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1459)
+||+|.+|.+ |+++|+.+... . .+.+. ......+.++.+|++........+||+|||||++||||++++|+++
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~----~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~ll 152 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAE----IKERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKVL 152 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHH----HHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999976 99999864211 1 11110 0112233444457776666677789999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000503 1380 CLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1447 (1459)
Q Consensus 1380 lLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1447 (1459)
||||||++||..+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.+.+.
T Consensus 153 llDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~~ 223 (232)
T cd03300 153 LLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEPA 223 (232)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCCc
Confidence 99999999999999999999987653 7999999999999876 89999999999999999999987553
No 275
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-38 Score=352.54 Aligned_cols=204 Identities=26% Similarity=0.430 Sum_probs=174.2
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 478999999963 469999999999999999999999999999999999999999999999998753 56789999
Q ss_pred EeCCCcCCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||++.+|++ |++||+..... ....+. ...+.+.++.+|++........+||||||||++||||++++|++
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~ 149 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEA-----RRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPEL 149 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHH-----HHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999986 99999864321 111111 11234455556777767777778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
+||||||++||+.+.+.+.+.|++.. +++|||+++|+++.+.. ||++++|++|++++.|
T Consensus 150 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 150 LILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999998764 47899999999999876 8999999999998865
No 276
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-38 Score=356.93 Aligned_cols=204 Identities=27% Similarity=0.371 Sum_probs=175.7
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 11 ~~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 11 TPLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred CcEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 35999999999964 46999999999999999999999999999999999999999999999998763 467899
Q ss_pred EEEeCCCcCCC-ccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1301 AVVPQSPFLFE-GSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1301 ~~VpQdp~lf~-gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+|+||+|.+|+ .|++||+.+... ..++++.++ ++.+|++........+||||||||++|||||+++|++
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~---------l~~~gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~l 154 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQA---------LAAVGLADRANEWPAALSGGQKQRVALARALIHRPGL 154 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHH---------HHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999987 599999975321 112333333 3444665556666778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChh
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1440 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~ 1440 (1459)
|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 155 llLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 155 LLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999998763 37899999999999865 8999999999999988764
No 277
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-38 Score=367.18 Aligned_cols=220 Identities=24% Similarity=0.419 Sum_probs=185.4
Q ss_pred CccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-----CCCceEEECCEeCCCC--C
Q 000503 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1292 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i--~ 1292 (1459)
+..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +
T Consensus 43 ~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 446999999999964 369999999999999999999999999999999999986 6899999999998753 4
Q ss_pred hHHHhcccEEEeCCCcCCCccHHHhcCcCCCC--------------------ChHHHHHHHHHhcHHHHHHhCCCchhhh
Q 000503 1293 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMN--------------------DDLKIWSVLEKCHVKEEVEAVGLETFVK 1352 (1459)
Q Consensus 1293 ~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~~--------------------~d~ei~~aL~~~~l~~~i~~lGLdt~v~ 1352 (1459)
...+|++++|+||++.+|++|+++|+...... .++++.++++.+++.+ +++...+
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~~~~~~~ 195 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWD-----EVNDRLD 195 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCch-----hhhHHhc
Confidence 56788999999999999999999999742110 0122333444443322 1234556
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEE-EEEeC
Q 000503 1353 ESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEI-LILDH 1430 (1459)
Q Consensus 1353 e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrI-lVl~~ 1430 (1459)
....+||||||||++|||||+++|+||||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||+| ++|++
T Consensus 196 ~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~ 275 (305)
T PRK14264 196 DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTG 275 (305)
T ss_pred CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecC
Confidence 677789999999999999999999999999999999999999999999988777899999999999876 8997 56799
Q ss_pred CeEEEecChhHHhccC
Q 000503 1431 GHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1431 G~IvE~G~p~eLl~~~ 1446 (1459)
|++++.|+++++.+++
T Consensus 276 G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 276 GELVEYDDTDKIFENP 291 (305)
T ss_pred CEEEEeCCHHHHHhCc
Confidence 9999999999998654
No 278
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.5e-38 Score=352.57 Aligned_cols=200 Identities=31% Similarity=0.421 Sum_probs=170.1
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHhcc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1299 (1459)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 6899999999532 4699999999999999999999999999999999999999999999999999887643 46789
Q ss_pred cEEEeCCCcCCC-ccHHHhcCcCC---CCC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1300 FAVVPQSPFLFE-GSLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1300 i~~VpQdp~lf~-gTIReNLdp~~---~~~----d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
++|+||+|.+|. .|+++|+.... ... +++++++++. +|++........+||||||||++||||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrl~la~a 151 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQ---------VGLEHKADAFPEQLSGGEQQRVAIARA 151 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHH---------cCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 999999999986 59999986531 111 1233333443 455444444556899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCe
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGH 1432 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~ 1432 (1459)
|+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 152 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 152 IVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999998864 48999999999999987 89999999985
No 279
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-38 Score=359.34 Aligned_cols=221 Identities=25% Similarity=0.369 Sum_probs=185.9
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCC-----CceEEECCEeCCC--CCh
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIIN--TPV 1293 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~--i~~ 1293 (1459)
+.|+++|++++|+. +.+|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 46999999999964 35999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HHHhcccEEEeCCCcCCCccHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000503 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp~lf~gTIReNLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQr 1365 (1459)
..+|+.++++||++.+|+.|++||+.+.. ..++ +++.++++.+++.+.+ +...+.....||||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq~qr 158 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEI-----KHKIHKSALDLSGGQQQR 158 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchh-----hhHhcCCcccCCHHHHHH
Confidence 67889999999999999999999996421 1121 2234444444443222 223456667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeC-----CeEEEec
Q 000503 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDH-----GHLVEQG 1437 (1459)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~-----G~IvE~G 1437 (1459)
++||||++++|+||||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++.|
T Consensus 159 v~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 238 (261)
T PRK14258 159 LCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEFG 238 (261)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEeC
Confidence 999999999999999999999999999999999998742 48999999999999876 799999999 9999999
Q ss_pred ChhHHhccCCc
Q 000503 1438 NPQTLLQDECS 1448 (1459)
Q Consensus 1438 ~p~eLl~~~~~ 1448 (1459)
+|+++.+++..
T Consensus 239 ~~~~~~~~~~~ 249 (261)
T PRK14258 239 LTKKIFNSPHD 249 (261)
T ss_pred CHHHHHhCCCC
Confidence 99999876554
No 280
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-38 Score=361.71 Aligned_cols=221 Identities=25% Similarity=0.364 Sum_probs=186.3
Q ss_pred CccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCC--CC
Q 000503 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TP 1292 (1459)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~ 1292 (1459)
.-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 18 ~~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 18 HSVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred CceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 336999999999964 3699999999999999999999999999999999999863 59999999999864 34
Q ss_pred hHHHhcccEEEeCCCcCCCccHHHhcCcCCC---C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1293 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1293 ~~~lR~~i~~VpQdp~lf~gTIReNLdp~~~---~---~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
...+|++++|+||++.+|+.|+++|+..... . .++++.++++.+++.+.+ ..........||||||||+
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgGq~qrv 170 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-----KDKLKEKGTALSGGQQQRL 170 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-----HHHhcCCcccCCHHHHHHH
Confidence 4567899999999999998999999965321 1 123344455555543322 2234455678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe---------CCeEEEe
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD---------HGHLVEQ 1436 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~---------~G~IvE~ 1436 (1459)
+|||||+++|+||||||||++||..+.+.+.+.|++..+++|||+|+|+++.+.. |||+++|+ +|++++.
T Consensus 171 ~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~ 250 (274)
T PRK14265 171 CIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEF 250 (274)
T ss_pred HHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999988778999999999999875 89999997 8999999
Q ss_pred cChhHHhccCC
Q 000503 1437 GNPQTLLQDEC 1447 (1459)
Q Consensus 1437 G~p~eLl~~~~ 1447 (1459)
|+++++..++.
T Consensus 251 g~~~~~~~~~~ 261 (274)
T PRK14265 251 SPTEQMFGSPQ 261 (274)
T ss_pred CCHHHHHhCCC
Confidence 99999987654
No 281
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.1e-37 Score=358.49 Aligned_cols=229 Identities=23% Similarity=0.347 Sum_probs=184.9
Q ss_pred cEEEEEEEEEecCC-------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChH
Q 000503 1222 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~ 1294 (1459)
-|+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999521 24699999999999999999999999999999999999999999999999999766666
Q ss_pred HHhcccEEEeCCCc--CCCc-cHHHhcCcC---C-CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPF--LFEG-SLRDNLDPF---H-MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~--lf~g-TIReNLdp~---~-~~~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQrl 1366 (1459)
..|++++|+||+|. +++. |+.+|+... + .....+..+ .+.+.++.+|++. .......+||+|||||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv 158 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREK-----QIIETLRQVGLLPDHASYYPHMLAPGQKQRL 158 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHcCCChHHHhcCchhcCHHHHHHH
Confidence 66778999999985 4444 888887531 1 111111111 1223334445532 23344568999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
+||||++++|+||||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 159 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 159 GLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTADVL 238 (267)
T ss_pred HHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHh
Confidence 99999999999999999999999999999999998864 37899999999999987 8999999999999999999998
Q ss_pred ccCC-cHHHHHHH
Q 000503 1444 QDEC-SVFSSFVR 1455 (1459)
Q Consensus 1444 ~~~~-~~f~~l~~ 1455 (1459)
+++. ..+++++.
T Consensus 239 ~~~~~~~~~~~~~ 251 (267)
T PRK15112 239 ASPLHELTKRLIA 251 (267)
T ss_pred cCCCCHHHHHHHH
Confidence 7653 34556665
No 282
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=4.8e-38 Score=353.64 Aligned_cols=210 Identities=24% Similarity=0.319 Sum_probs=175.7
Q ss_pred cEEEEEEEEEecCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH---H
Q 000503 1222 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---L 1296 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---l 1296 (1459)
.|+++|++++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 589999999997532 25999999999999999999999999999999999999999999999999998877653 2
Q ss_pred -hcccEEEeCCCcCCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1297 -RGRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1297 -R~~i~~VpQdp~lf~g-TIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
+++++|+||+|.+|++ |++||+.+.. .....+. +..+.+.++.+|++.........||||||||++||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrl~la~a 160 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQS-----RNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA 160 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHH
Confidence 3679999999999885 9999986421 1111111 1122334444466555555566899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEEEe
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1436 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~ 1436 (1459)
|+++|++|||||||++||+++.+.+.+.|++.. .++|||+|+|+++.+..||+|++|++|+++|.
T Consensus 161 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 161 FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999998764 27899999999999988999999999999874
No 283
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.8e-38 Score=365.07 Aligned_cols=213 Identities=30% Similarity=0.504 Sum_probs=185.0
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.++++|++.+|+. ...+|+||||+|++||.+|++||||||||||+++|.|+++|++|+|.++|.|...- ....|+++|
T Consensus 4 ~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 4788999999973 24699999999999999999999999999999999999999999999999998765 678899999
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCCC-------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~~-------~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
|+||+|.+++. |++|||+++... .++++.+.++..+ |+..-+.....||+|||||+.||+||+
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~---------L~~~~~~~~~~lS~G~kqrl~ia~aL~ 152 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFG---------LEDKANKKVRTLSGGMKQRLSIALALL 152 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcC---------CchhhCcchhhcCHHHHHHHHHHHHHh
Confidence 99999998876 999999865321 1334555555554 443223334579999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC-C-cEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSECK-G-MTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~-~-~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
.+|++|||||||++||+.+...+.+.|++..+ + +||++.||.++.+.. ||||++|++|+++..|+++++.+.
T Consensus 153 ~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 153 HDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred cCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999998865 4 799999999999988 999999999999999999998654
No 284
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=8.1e-38 Score=350.27 Aligned_cols=206 Identities=27% Similarity=0.380 Sum_probs=173.4
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH---Hhcc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LRGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR~~ 1299 (1459)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++... +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999432 46999999999999999999999999999999999999999999999999998876543 6889
Q ss_pred cEEEeCCCcCC-CccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1300 FAVVPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1300 i~~VpQdp~lf-~gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
++|+||+|.+| ..|+++|+.... ..++++..+. ..+.++.+|++........+||+|||||++||||++++
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNK 155 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcC
Confidence 99999999875 569999997531 1222222211 12334444665555666678999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEE
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLV 1434 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~Iv 1434 (1459)
|++|||||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 156 PAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 99999999999999999999999998763 47899999999999987 7999999999985
No 285
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.3e-38 Score=347.71 Aligned_cols=204 Identities=52% Similarity=0.902 Sum_probs=181.8
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcCcEEEEcCCCCCCC
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILS 685 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~~~l~~ 685 (1459)
++++|+++.|..... +..++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+|+|++|+|.+++
T Consensus 1 l~~~~l~~~~~~~~~-~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~ 79 (204)
T cd03250 1 ISVEDASFTWDSGEQ-ETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQN 79 (204)
T ss_pred CEEeEEEEecCCCCc-cccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhcc
Confidence 357899999864210 0023699999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCccccc
Q 000503 686 GTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVD 765 (1459)
Q Consensus 686 ~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD 765 (1459)
.|++||+.++..+++++..++.+.+++...+..+|.|++|.+++++.+||||||||++||||++++|++++|||||++||
T Consensus 80 ~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD 159 (204)
T cd03250 80 GTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVD 159 (204)
T ss_pred CcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 99999999987777777788888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000503 766 AQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1459)
Q Consensus 766 ~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~ 810 (1459)
++..+.+++.++......++|+|++||+.+.+..||++++|++|+
T Consensus 160 ~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 160 AHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999888887544322234689999999999988899999999984
No 286
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-38 Score=348.64 Aligned_cols=200 Identities=26% Similarity=0.406 Sum_probs=170.2
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999642 2 39999999999999999999999999999999999999999999999987654 4678999
Q ss_pred EeCCCcCCCc-cHHHhcCcCCCC-------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~~~-------~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
+||+|.+|++ |++||+.+.... .++++.++++. +|++.........||+|||||++||||+++
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrv~ia~al~~ 145 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALAR---------VGLAGLEKRLPGELSGGERQRVALARVLVR 145 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHH---------cCCHHHHhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999986 999999753211 12233334444 355544555566899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
+|++|||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 146 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 146 DKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999998864 37899999999999976 8999999999998765
No 287
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=6.5e-38 Score=350.00 Aligned_cols=209 Identities=25% Similarity=0.383 Sum_probs=182.7
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh----HHHhc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV----RDLRG 1298 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~----~~lR~ 1298 (1459)
+.+.|+.++|+++ .++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 1 ~~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 1 VQVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred CeeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 3578999999755 569999999999999999999999999999999999999999999999998876542 34567
Q ss_pred ccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1299 RFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1299 ~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--GLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
.++|+||+|.+|+.|+++|+......++++..++++.+++.+.++.+ |+++.++....+||+|||||++||||++++|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 89999999999999999999875545566677888888888777665 7888888888899999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHH--HHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCe
Q 000503 1377 KVLCLDECTANVDAQTASILQN--AISSEC-KGMTVITIAHRISTVLNMDEILILDHGH 1432 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~--~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~~G~ 1432 (1459)
+||||||||++||..+.+.+.+ .++... .+.|+|++||+.+.+..||++++|++|+
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 9999999999999999888776 444432 3689999999999999999999999984
No 288
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-38 Score=369.97 Aligned_cols=226 Identities=21% Similarity=0.325 Sum_probs=183.9
Q ss_pred cEEEEEEEEEecC--CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC----CCCceEEECCEeCCCCChHH
Q 000503 1222 LIEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP----ICGGQILVDGLNIINTPVRD 1295 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~----~~~G~I~IDG~di~~i~~~~ 1295 (1459)
-++++|++++|+. +...+|+||||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3799999999953 22459999999999999999999999999999999999986 58999999999999888766
Q ss_pred Hh----cccEEEeCCCc--CCC-ccHHHhcCcC-------CC-CCh-HHHHHHHHHhcHHHHHHhCCCch---hhhcCCC
Q 000503 1296 LR----GRFAVVPQSPF--LFE-GSLRDNLDPF-------HM-NDD-LKIWSVLEKCHVKEEVEAVGLET---FVKESGI 1356 (1459)
Q Consensus 1296 lR----~~i~~VpQdp~--lf~-gTIReNLdp~-------~~-~~d-~ei~~aL~~~~l~~~i~~lGLdt---~v~e~G~ 1356 (1459)
++ +++++|||+|. +++ -||.+|+... .. ..+ .+. +....+.++.+||+. .......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~~~gL~~~~~~~~~~p~ 157 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWR-----KRRAIELLHRVGIKDHKDAMRSFPY 157 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHH-----HHHHHHHHHHCCCCChHHHHhCCch
Confidence 53 47999999996 333 4888887421 00 011 010 111233444445542 3455667
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeE
Q 000503 1357 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHL 1433 (1459)
Q Consensus 1357 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~I 1433 (1459)
.||||||||++|||||+.+|+|||+||||++||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|
T Consensus 158 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~i 237 (330)
T PRK15093 158 ELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQT 237 (330)
T ss_pred hCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEE
Confidence 8999999999999999999999999999999999999999999988653 7899999999999976 899999999999
Q ss_pred EEecChhHHhccCCcHHHH
Q 000503 1434 VEQGNPQTLLQDECSVFSS 1452 (1459)
Q Consensus 1434 vE~G~p~eLl~~~~~~f~~ 1452 (1459)
+|.|+++++.+++...|.+
T Consensus 238 ve~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 238 VETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EEECCHHHHHhCCCCHHHH
Confidence 9999999999876656654
No 289
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=6.7e-38 Score=358.48 Aligned_cols=215 Identities=23% Similarity=0.348 Sum_probs=183.1
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 789999999964 369999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EeCCCc-CCCccHHHhcCcCCC-C------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1303 VPQSPF-LFEGSLRDNLDPFHM-N------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1303 VpQdp~-lf~gTIReNLdp~~~-~------~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
+||+|. .+..|+++|+..+.. . ..++ ....+.+.++.+|++.........||+|||||++||||++.
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~ 154 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPH-----DAAVVDRALARTELSHLADRDMSTLSGGERQRVHVARALAQ 154 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHH-----HHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhc
Confidence 999995 456799999965321 0 0000 01122334444455555556667899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
+|+++||||||++||.++.+.+.+.|++.. ++.|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 155 EPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 999999999999999999999999998764 37899999999999964 99999999999999999999865
No 290
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.4e-38 Score=332.98 Aligned_cols=204 Identities=31% Similarity=0.421 Sum_probs=174.2
Q ss_pred CceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000503 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1459)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1459)
...|+++++++++.. +.+++|+||+|++||+++|+|||||||||||++|+|+++|++|+|.+.|
T Consensus 6 ~~~I~vr~v~~~fG~------~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~ 79 (263)
T COG1127 6 EPLIEVRGVTKSFGD------RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEE 79 (263)
T ss_pred cceEEEeeeeeecCC------EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHH
Confidence 467999999999853 3459999999999999999999999999999999999999999999987
Q ss_pred ------cEEEEcCCCCCCCC-CHHHHhccC----CCCCHHHHHH----HHHHhcchhh-HhhccCCCcccccCCCcccCc
Q 000503 673 ------SIAYVPQVPWILSG-TIRDNILFG----KNYDPQSYSE----TLKACTLDVD-ISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 673 ------~i~y~~Q~~~l~~~-ti~~nI~~g----~~~~~~~~~~----v~~~~~l~~d-i~~~~~gd~t~ig~~g~~LSG 736 (1459)
++|+++|+--||+. ||+||+.|. ...+++.+++ -+++++|..+ .+.+| ..|||
T Consensus 80 ~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSG 148 (263)
T COG1127 80 LYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSG 148 (263)
T ss_pred HHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcc
Confidence 59999999999987 999999995 2345554443 4578888877 56555 48999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~-~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1459)
|++.|+|||||+..+|+|+++|||||+|||.++..+ ++++... ..-+-|+|+|||+++.+.. ||+|+++.||+|...
T Consensus 149 GM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~-~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~ 227 (263)
T COG1127 149 GMRKRVALARAIALDPELLFLDEPTSGLDPISAGVI-DELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAE 227 (263)
T ss_pred hHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHH-HHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEe
Confidence 999999999999999999999999999999977754 4434331 2236799999999998775 899999999999999
Q ss_pred cCHHHHHhcc
Q 000503 815 GSSADLAVSL 824 (1459)
Q Consensus 815 g~~~~l~~~~ 824 (1459)
|+++|+.+..
T Consensus 228 Gt~~el~~sd 237 (263)
T COG1127 228 GTPEELLASD 237 (263)
T ss_pred CCHHHHHhCC
Confidence 9999997643
No 291
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-38 Score=357.67 Aligned_cols=222 Identities=25% Similarity=0.355 Sum_probs=185.0
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC--C---CCceEEECCEeCCC--CChH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIIN--TPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~--i~~~ 1294 (1459)
-|+++||+++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999964 469999999999999999999999999999999999975 4 59999999999864 3455
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCC---C-CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---M-ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~---~-~~----d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
.+|++++|+||+|.+|+.|+++|+.... . .. ++++.++++.+++.+ ++.........+||+|||||+
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~i~~~~~~~~~~LS~Gq~qrv 157 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWD-----EVKDHLHESALSLSGGQQQRV 157 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCcc-----chhhHHhcCcccCCHHHHHHH
Confidence 6788999999999999999999986421 1 11 122333344443321 122344556678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||++++|++|||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+...+
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 237 (252)
T PRK14255 158 CIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMFLN 237 (252)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999987667899999999999876 899999999999999999999876
Q ss_pred CCcHH
Q 000503 1446 ECSVF 1450 (1459)
Q Consensus 1446 ~~~~f 1450 (1459)
+...+
T Consensus 238 ~~~~~ 242 (252)
T PRK14255 238 PKEKE 242 (252)
T ss_pred CCChH
Confidence 65433
No 292
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=3.5e-38 Score=353.54 Aligned_cols=211 Identities=25% Similarity=0.347 Sum_probs=180.9
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999963 35999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCCcCCCccHHHhcCcCCCC--ChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1302 VVPQSPFLFEGSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1302 ~VpQdp~lf~gTIReNLdp~~~~--~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
|+||+|.+|+.|++||+...... .+.+ ...+.+.++.+|++ +.......+||+|||||++|||||+++|++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPD------PAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKV 158 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChH------HHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999642110 1100 01123445555774 456677789999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEe-CCeEEEecChh
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILD-HGHLVEQGNPQ 1440 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~-~G~IvE~G~p~ 1440 (1459)
+||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 159 LLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999998864 3789999999999998899999995 66667888875
No 293
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=355.00 Aligned_cols=226 Identities=27% Similarity=0.377 Sum_probs=188.0
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECC------EeCCCCChHH
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDG------LNIINTPVRD 1295 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG------~di~~i~~~~ 1295 (1459)
.++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+.+...
T Consensus 10 ~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 10 VFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred heeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 5999999999964 4699999999999999999999999999999999999999997666665 6777777778
Q ss_pred HhcccEEEeCCCcCCCc-cHHHhcCcCC---CC-ChHHHHHHHHHhcHHHHHHhCCCc----hhhhcCCCCCChhHHHHH
Q 000503 1296 LRGRFAVVPQSPFLFEG-SLRDNLDPFH---MN-DDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1296 lR~~i~~VpQdp~lf~g-TIReNLdp~~---~~-~d~ei~~aL~~~~l~~~i~~lGLd----t~v~e~G~~LSgGQrQrl 1366 (1459)
+|++++|+||+|.+|++ |+++|+.... .. .+++.++. +.+.++.+|++ ...+..+..||+|||||+
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl 162 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKI-----VEECLRKVGLWKEVYDRLNSPASQLSGGQQQRL 162 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHH-----HHHHHHHcCCCccchhhhcCCcccCCHHHHHHH
Confidence 89999999999999986 9999997431 11 22232221 22333334553 234556678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||||++++|+++||||||++||..+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++.++
T Consensus 163 ~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~~~ 242 (257)
T PRK14246 163 TIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIFTS 242 (257)
T ss_pred HHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999987778999999999999955 899999999999999999999887
Q ss_pred CCcHHHHHH
Q 000503 1446 ECSVFSSFV 1454 (1459)
Q Consensus 1446 ~~~~f~~l~ 1454 (1459)
+...+.+.+
T Consensus 243 ~~~~~~~~~ 251 (257)
T PRK14246 243 PKNELTEKY 251 (257)
T ss_pred CCcHHHHHH
Confidence 654455443
No 294
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-38 Score=344.95 Aligned_cols=219 Identities=31% Similarity=0.438 Sum_probs=183.1
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCE---eCCCCChHHHhcc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL---NIINTPVRDLRGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~---di~~i~~~~lR~~ 1299 (1459)
|+++|++..|+. .++++|||++|+.||.+|+.||||||||||+.+|.|+..|++|+|.+||. |.++++.+ .++
T Consensus 3 i~i~~~~~~~~~--~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~R~ 78 (345)
T COG1118 3 IRINNVKKRFGA--FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--DRK 78 (345)
T ss_pred eeehhhhhhccc--ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--hcc
Confidence 778899888864 36899999999999999999999999999999999999999999999999 77774433 468
Q ss_pred cEEEeCCCcCCCc-cHHHhcCcCCCC-----ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1300 FAVVPQSPFLFEG-SLRDNLDPFHMN-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1300 i~~VpQdp~lf~g-TIReNLdp~~~~-----~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
||+|.|+.-||.- ||++|+.++-+. ++.++ +....+.++-..|+-.-..-..+||||||||++|||||.
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~-----r~rv~elL~lvqL~~la~ryP~QLSGGQrQRVALARALA 153 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEI-----RARVEELLRLVQLEGLADRYPAQLSGGQRQRVALARALA 153 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhH-----HHHHHHHHHHhcccchhhcCchhcChHHHHHHHHHHHhh
Confidence 9999999999975 999999876422 22222 112222222223444344556789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1450 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f 1450 (1459)
..|++|+||||.++||..-.+.+++-+++.. -+.|+++|||+.+.+.. ||||+||++|+|...|+|+|....+++.|
T Consensus 154 ~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s~f 233 (345)
T COG1118 154 VEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPASRF 233 (345)
T ss_pred cCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCccc
Confidence 9999999999999999999999998888764 38999999999998776 89999999999999999999999988766
No 295
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4.2e-38 Score=350.52 Aligned_cols=204 Identities=26% Similarity=0.416 Sum_probs=174.0
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCC--CChHHHhccc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRF 1300 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~--i~~~~lR~~i 1300 (1459)
|+++||+++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 478999999964 469999999999999999999999999999999999999999999999999853 4556788999
Q ss_pred EEEeCCCcCCC-ccHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1301 AVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1301 ~~VpQdp~lf~-gTIReNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
+|+||+|.+|+ .|++||+.... ..+.++..+ ...+.++.+|++........+||||||||++||||++++
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 153 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMN 153 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcC
Confidence 99999999987 59999996532 112222111 123445555777667777778999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeE
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1433 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~I 1433 (1459)
|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.+ ||+|++|++|++
T Consensus 154 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 154 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999998764 47899999999999976 899999999975
No 296
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-38 Score=326.19 Aligned_cols=217 Identities=26% Similarity=0.417 Sum_probs=187.4
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|.|+|||.|+.+-| ...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p-~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDP-SFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccCh-HHHhhhcce
Confidence 678999999976 334899999999999999999999999999999999999999999999999998754 678999999
Q ss_pred EeCCCcCCCc-cHHHhcCcCCCC---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFHMN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~~~---~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
++-+.-++.- |.||||.+++.. ++.++. +.+.+..+.++++..++.+-.+||.|+|||++|||||.++|+|
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~k-----ari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i 154 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIK-----ARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSI 154 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHH-----HHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCe
Confidence 9977777754 999999877532 333332 2333444555666666666667999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhHh-hcCEEEEEeCCeEEEecChhHHhccC
Q 000503 1379 LCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~~-~~TvI~IaHrl~ti~-~~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
++||||||+||.-+.+.+++.|++... +++||+-||-++.+. -||||+++.+|+++..|+++++.++.
T Consensus 155 ~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~ 224 (245)
T COG4555 155 LVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDART 224 (245)
T ss_pred EEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHH
Confidence 999999999999999999999988754 999999999999998 59999999999999999999998654
No 297
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-37 Score=349.67 Aligned_cols=214 Identities=27% Similarity=0.444 Sum_probs=180.9
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+. .+|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~---~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE---FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC---ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 478999999963 38999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred EeCCCcCCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf~-gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||++.+|+ .|++||+..... .+..+..+ .+.+.++.+|+...+.....+||+|||||++||||++++|++
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~l 150 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIER-----KVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARALVVNPKI 150 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhHHhcCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 999999986 699999964211 11111111 122333444555555666678999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1379 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
++|||||++||..+.+.+.+.+++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 151 lllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 151 LLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999988643 8999999999999876 8999999999999999999998754
No 298
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-37 Score=357.97 Aligned_cols=220 Identities=24% Similarity=0.308 Sum_probs=185.2
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCC--------CceEEECCEeCCCCChH
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC--------GGQILVDGLNIINTPVR 1294 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~--------~G~I~IDG~di~~i~~~ 1294 (1459)
++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 789999999964 36999999999999999999999999999999999999998 99999999999888888
Q ss_pred HHhcccEEEeCCCc-CCCccHHHhcCcCCC-C-ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1295 DLRGRFAVVPQSPF-LFEGSLRDNLDPFHM-N-DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~-lf~gTIReNLdp~~~-~-~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
.+|+.++|+||++. +|+.|++||+..... . ........-......+.++.+|+++..+.....||||||||++||||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~lara 159 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVTTLSGGELARVQFARV 159 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHH
Confidence 88889999999986 578899999965321 0 00000000001112344555577777777778999999999999999
Q ss_pred Hc---------cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecCh
Q 000503 1372 LL---------KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1439 (1459)
Q Consensus 1372 LL---------r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1439 (1459)
|+ .+|++|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.+ ||++++|++|++++.|++
T Consensus 160 l~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (272)
T PRK13547 160 LAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAHGAP 239 (272)
T ss_pred HhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEecCH
Confidence 99 59999999999999999999999999987643 7899999999999975 899999999999999999
Q ss_pred hHHhc
Q 000503 1440 QTLLQ 1444 (1459)
Q Consensus 1440 ~eLl~ 1444 (1459)
+++++
T Consensus 240 ~~~~~ 244 (272)
T PRK13547 240 ADVLT 244 (272)
T ss_pred HHHcC
Confidence 99875
No 299
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=350.12 Aligned_cols=209 Identities=24% Similarity=0.407 Sum_probs=178.4
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++||+++|+.. ..|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 6899999999632 249999999999999999999999999999999999999999999999887654 3578999
Q ss_pred EeCCCcCCCc-cHHHhcCcCC-CC---C---hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFH-MN---D---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~-~~---~---d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
+||+|.+|++ |++||+.... .. . ++++.++++ .+|++..+......||||||||++||||+++
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~---------~~~l~~~~~~~~~~LS~G~~qrv~laral~~ 146 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIAR---------QMGIEDLLARLPGQLSGGQRQRVALARCLVR 146 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHH---------HcCcHHHHhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999986 9999997431 11 1 122333344 4455555555566899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1446 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~ 1446 (1459)
+|+++||||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 147 ~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~~ 221 (232)
T PRK10771 147 EQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSGK 221 (232)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCh
Confidence 9999999999999999999999999988643 7899999999999876 8999999999999999999998654
No 300
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.9e-38 Score=350.57 Aligned_cols=201 Identities=33% Similarity=0.457 Sum_probs=166.4
Q ss_pred EEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000503 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1459)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1459)
+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 36899999964 35999999999999999999999999999999999999999999999998874 468899999
Q ss_pred eCCCcC---CCccHHHhcCcCCCC-------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1304 PQSPFL---FEGSLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1304 pQdp~l---f~gTIReNLdp~~~~-------~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
||+|.+ |+.|++||+...... ..++. ...+.+.++.+|++........+||||||||++|||||+
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~ 148 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKAD-----KAKVDEALERVGLSELADRQIGELSGGQQQRVLLARALV 148 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHH-----HHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHH
Confidence 999976 568999998643211 11110 111233344445655555566789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++| +++.|
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 149 QDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999998764 57899999999999976 8999999986 55554
No 301
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5.8e-38 Score=366.73 Aligned_cols=207 Identities=26% Similarity=0.395 Sum_probs=175.0
Q ss_pred EecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCC
Q 000503 1231 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1310 (1459)
Q Consensus 1231 ~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf 1310 (1459)
+|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4642 369999999999999999999999999999999999999999999999999976 3456788999999999999
Q ss_pred Cc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCc
Q 000503 1311 EG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTA 1386 (1459)
Q Consensus 1311 ~g-TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS 1386 (1459)
++ |++||+.+... .+..+.. ....+.++.+|++........+||||||||++|||||+++|++|||||||+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAE-----ERAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 86 99999975321 1111111 112334444566555556667899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1387 NVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1387 ~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999998864 47899999999999976 999999999999999999998754
No 302
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8e-38 Score=342.72 Aligned_cols=200 Identities=30% Similarity=0.458 Sum_probs=169.2
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------c
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------S 673 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------~ 673 (1459)
..|+++|++|.|... + +|+||||++++|++++|+||||||||||+|+|+|.++|.+|+|.+.| +
T Consensus 3 ~~i~v~nl~v~y~~~---~---vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~ 76 (254)
T COG1121 3 PMIEVENLTVSYGNR---P---VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLR 76 (254)
T ss_pred cEEEEeeeEEEECCE---e---eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCe
Confidence 358999999999742 2 59999999999999999999999999999999999999999999865 4
Q ss_pred EEEEcCCC---CCCCCCHHHHhccCCCC-----------CHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHH
Q 000503 674 IAYVPQVP---WILSGTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1459)
Q Consensus 674 i~y~~Q~~---~l~~~ti~~nI~~g~~~-----------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 739 (1459)
||||||.. |-|..||+|-+..|... |.+..+++++..++. |+. ...-.+|||||+
T Consensus 77 IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~----------~r~i~~LSGGQ~ 145 (254)
T COG1121 77 IGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLR----------DRQIGELSGGQK 145 (254)
T ss_pred EEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhh----------CCcccccCcHHH
Confidence 99999954 77889999999987432 346777888888876 333 233448999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000503 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1459)
Q Consensus 740 qRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~ 818 (1459)
|||-|||||.++|++|+|||||+++|+.++..+++- +.....+|+||++|||+++.+. ++|+|+.|+ +++...|+++
T Consensus 146 QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~l-L~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~ 223 (254)
T COG1121 146 QRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDL-LKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPE 223 (254)
T ss_pred HHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChh
Confidence 999999999999999999999999999999988875 4332334899999999999876 599999995 5678899988
Q ss_pred HHHh
Q 000503 819 DLAV 822 (1459)
Q Consensus 819 ~l~~ 822 (1459)
+...
T Consensus 224 ~~~~ 227 (254)
T COG1121 224 EVLT 227 (254)
T ss_pred hccC
Confidence 8754
No 303
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.2e-38 Score=317.91 Aligned_cols=196 Identities=29% Similarity=0.408 Sum_probs=169.8
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------cEE
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SIA 675 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i~ 675 (1459)
.++++.|+|... + -..+++|++||+++|+|||||||||||++|.|+..|.+|+|.++| .++
T Consensus 3 ~L~~V~~~y~~~---~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVS 74 (231)
T COG3840 3 ALDDVRFSYGHL---P-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVS 74 (231)
T ss_pred cccceEEeeCcc---e-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChh
Confidence 456778887532 2 246789999999999999999999999999999999999999987 489
Q ss_pred EEcCCCCCCCC-CHHHHhccCCC-------CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHH
Q 000503 676 YVPQVPWILSG-TIRDNILFGKN-------YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 747 (1459)
Q Consensus 676 y~~Q~~~l~~~-ti~~nI~~g~~-------~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARa 747 (1459)
.++|+..||.- ||++||-+|.. .+.++.+.++...+|....+++|. +|||||||||||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 99999999976 99999999853 245678888889999988888886 899999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000503 748 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 748 ly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~-~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
+.++.+|++||||||||||.-......- +... ..++.|++||||+++.+.. +|+++++++|+|.++|+.+++..
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~L-v~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~ 219 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLAL-VSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLS 219 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHH-HHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhc
Confidence 9999999999999999999988877654 2221 3457799999999998775 99999999999999999988764
No 304
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-38 Score=359.64 Aligned_cols=203 Identities=32% Similarity=0.412 Sum_probs=174.7
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------c
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 673 (1459)
.++++|++..|... . +++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++| .
T Consensus 3 ~i~l~~v~K~yg~~-----~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~ 76 (338)
T COG3839 3 ELELKNVRKSFGSF-----E-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRG 76 (338)
T ss_pred EEEEeeeEEEcCCc-----e-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCC
Confidence 47889999998632 1 49999999999999999999999999999999999999999999987 5
Q ss_pred EEEEcCCCCCCCC-CHHHHhccCCCCC-------HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 674 IAYVPQVPWILSG-TIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 674 i~y~~Q~~~l~~~-ti~~nI~~g~~~~-------~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
||+|+|+.-|+.. ||+|||.||.... +++.+++.+..++++-++..| ..||||||||||||
T Consensus 77 iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAla 145 (338)
T COG3839 77 IAMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALA 145 (338)
T ss_pred EEEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHH
Confidence 9999999999865 9999999986542 457778888888887776555 48999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHhcc
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVSL 824 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 824 (1459)
||+.++|+++|||||+|+||++....+-..+..-....+.|+|.|||+..... .||+|++|++|+|.+.|++.|+....
T Consensus 146 RAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 146 RALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 99999999999999999999998887766532211233679999999987765 59999999999999999999997543
No 305
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.4e-37 Score=355.42 Aligned_cols=212 Identities=37% Similarity=0.660 Sum_probs=191.2
Q ss_pred CCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcCcEEEEcCCC
Q 000503 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVP 681 (1459)
Q Consensus 602 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~~ 681 (1459)
....++++|+++.+ +++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++|.|+|++|++
T Consensus 36 ~~~~l~i~nls~~~--------~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~~ 107 (282)
T cd03291 36 DDNNLFFSNLCLVG--------APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQFS 107 (282)
T ss_pred CCCeEEEEEEEEec--------ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCcc
Confidence 45678999999852 2359999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCc
Q 000503 682 WILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVL 761 (1459)
Q Consensus 682 ~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~ 761 (1459)
++++.|++||+.++..+++.++.+.++++++...+..+|.+.++.+++++.+||||||||++||||++++|+++||||||
T Consensus 108 ~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt 187 (282)
T cd03291 108 WIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPF 187 (282)
T ss_pred cccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 99999999999987665666677888888998889999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000503 762 SAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 762 s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
++||+.+.+.+.+.++.. +.+++|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 188 ~gLD~~~~~~l~~~ll~~-~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 247 (282)
T cd03291 188 GYLDVFTEKEIFESCVCK-LMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQS 247 (282)
T ss_pred ccCCHHHHHHHHHHHHHH-hhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 999999988887753322 345789999999999998899999999999999999988754
No 306
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.6e-37 Score=354.65 Aligned_cols=221 Identities=26% Similarity=0.422 Sum_probs=181.8
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC----CCceEEECCEeCCCCChHHHh
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI----CGGQILVDGLNIINTPVRDLR 1297 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~----~~G~I~IDG~di~~i~~~~lR 1297 (1459)
.++++|++++| + .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 58999999999 2 3699999999999999999999999999999999999999 999999999998632 2234
Q ss_pred cccEEEeCCCc-CCC--ccHHHhcCc----CC-CCChHHHHHHHHHhcHHHHHHhCCCch---hhhcCCCCCChhHHHHH
Q 000503 1298 GRFAVVPQSPF-LFE--GSLRDNLDP----FH-MNDDLKIWSVLEKCHVKEEVEAVGLET---FVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1298 ~~i~~VpQdp~-lf~--gTIReNLdp----~~-~~~d~ei~~aL~~~~l~~~i~~lGLdt---~v~e~G~~LSgGQrQrl 1366 (1459)
+.++|+||+|. .|. .|+.+|+.. .+ ...+++++++++.+ |++. .++.....||||||||+
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAV---------GLENAARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHc---------CCCChhhhhhcCCcccCHHHHHHH
Confidence 67999999985 343 477777532 11 11233444444444 4443 45667778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
+|||||+++|+||||||||++||..+.+.+.+.|++..+ ++|||+++|+++.+.+ ||||++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999988643 7899999999999875 8999999999999999999998
Q ss_pred ccCCc-HHHHHHHh
Q 000503 1444 QDECS-VFSSFVRA 1456 (1459)
Q Consensus 1444 ~~~~~-~f~~l~~~ 1456 (1459)
+++.. .++.++..
T Consensus 230 ~~~~~~~~~~~~~~ 243 (254)
T PRK10418 230 NAPKHAVTRSLVSA 243 (254)
T ss_pred hCCCCHHHHHHHHh
Confidence 76544 45555543
No 307
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-38 Score=328.17 Aligned_cols=204 Identities=25% Similarity=0.342 Sum_probs=173.1
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC-----eEEEEcC------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH-----GSIHASG------ 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~-----G~i~~~~------ 672 (1459)
..++++|.++.|.. ..+|+|||++|++++++|++|||||||||||+++.+..+..+ |+|.++|
T Consensus 6 ~~~~~~~l~~yYg~------~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~ 79 (253)
T COG1117 6 PAIEVRDLNLYYGD------KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDP 79 (253)
T ss_pred ceeEecceeEEECc------hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCC
Confidence 46888999998863 335999999999999999999999999999999999887765 8998876
Q ss_pred ---------cEEEEcCCCCCCCCCHHHHhccCCCC---C----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 673 ---------SIAYVPQVPWILSGTIRDNILFGKNY---D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 673 ---------~i~y~~Q~~~l~~~ti~~nI~~g~~~---~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
+||.|+|.|.-|..||.|||.+|... . ++..++.++.++|.+.... ...+.+..|||
T Consensus 80 ~~d~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSG 152 (253)
T COG1117 80 KVDVVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSG 152 (253)
T ss_pred CCCHHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCCh
Confidence 59999999999999999999998432 1 2346667777777665542 34567889999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
||+||++||||+.-+|+|+|||||||||||.+..+|-+. +.. +.++-|+|+|||+++.... +|+...+-+|+++|.|
T Consensus 153 GQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeL-i~e-Lk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g 230 (253)
T COG1117 153 GQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEEL-ITE-LKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFG 230 (253)
T ss_pred hHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHH-HHH-HHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEc
Confidence 999999999999999999999999999999988888764 433 5556699999999998765 9999999999999999
Q ss_pred CHHHHHh
Q 000503 816 SSADLAV 822 (1459)
Q Consensus 816 ~~~~l~~ 822 (1459)
+.+++-.
T Consensus 231 ~T~~iF~ 237 (253)
T COG1117 231 PTDKIFT 237 (253)
T ss_pred CHHhhhc
Confidence 9888743
No 308
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-37 Score=329.14 Aligned_cols=220 Identities=27% Similarity=0.425 Sum_probs=187.2
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hccc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1300 (1459)
-++++|++..|.. -.+|+||||++++||.++++||||+||||++++|+|+.++.+|+|.++|.||...+++.. |..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 3789999999975 369999999999999999999999999999999999999999999999999999987764 6679
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCCC-ChHHHHHHHHHhcHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHMN-DDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~~-~d~ei~~aL~~~~l~~~i~~l-GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
+||||...+|+. ||.|||..+... .+++-++. .+++..+-+ -|....+..+.+|||||+|.++|||||+.+||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccc----cHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 999999999986 999999765322 11111110 022222222 45566677788999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1447 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~ 1447 (1459)
+|+|||||.+|-+.--+.|.++|++..+ +.||+.|-++.....+ +||.+||++|+|+..|+.+||.+++.
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~~ 229 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADPD 229 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCHH
Confidence 9999999999999999999999998764 5699999999998775 89999999999999999999998754
No 309
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.1e-37 Score=337.04 Aligned_cols=194 Identities=28% Similarity=0.365 Sum_probs=158.9
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1459)
+++|++-.|...... ..+|+++||+|++||+++|+|||||||||||++|.|...|++|.|.++|
T Consensus 3 ~~~~v~k~y~~~~~~--~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~ 80 (226)
T COG1136 3 ELKNVSKIYGLGGEK--VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKL 80 (226)
T ss_pred EEeeeEEEeccCCcc--eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHH
Confidence 456666666543221 3569999999999999999999999999999999999999999999987
Q ss_pred ---cEEEEcCCCCCCCC-CHHHHhccC----CCCC---HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 ---SIAYVPQVPWILSG-TIRDNILFG----KNYD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~~-ti~~nI~~g----~~~~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
.|||++|+..|... |++|||.+. .... .++.++.++..+|.+... ..+...||||||||
T Consensus 81 R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQR 150 (226)
T COG1136 81 RRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQR 150 (226)
T ss_pred HHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHH
Confidence 49999999987755 999999853 2221 345555666666654433 23456999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~ 812 (1459)
|||||||+.+|+|++.||||.+||.++++.|++.+......+|+|+|+|||+......|||++.|+||++.
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999999999999863322134578999999999999999999999999854
No 310
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.3e-37 Score=353.72 Aligned_cols=215 Identities=20% Similarity=0.286 Sum_probs=177.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccC--CCCCceEEECCEeCCCCChHHH-hcc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDL-RGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~l-R~~ 1299 (1459)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999963 36999999999999999999999999999999999994 7999999999999988877654 456
Q ss_pred cEEEeCCCcCCCc-cHHHhcCcCCC----------CChHHHHHHHHHhcHHHHHHhCCCchh-hhcCCC-CCChhHHHHH
Q 000503 1300 FAVVPQSPFLFEG-SLRDNLDPFHM----------NDDLKIWSVLEKCHVKEEVEAVGLETF-VKESGI-SFSVGQRQLI 1366 (1459)
Q Consensus 1300 i~~VpQdp~lf~g-TIReNLdp~~~----------~~d~ei~~aL~~~~l~~~i~~lGLdt~-v~e~G~-~LSgGQrQrl 1366 (1459)
++++||+|.+|++ |+++|+..... .+.++.. ..+.+.++.+|++.. ...... .||||||||+
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl 153 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL-----KLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRN 153 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHH-----HHHHHHHHHcCCchhhcccccccCcCHHHHHHH
Confidence 9999999999987 89999853210 0111111 123344455577643 333333 4999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh--cCEEEEEeCCeEEEecChhHHh
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN--MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~--~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
+|||||+++|++|||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 154 EILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELAK 233 (243)
T ss_pred HHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHhc
Confidence 99999999999999999999999999999999998864 47899999999999986 7999999999999999998654
Q ss_pred c
Q 000503 1444 Q 1444 (1459)
Q Consensus 1444 ~ 1444 (1459)
.
T Consensus 234 ~ 234 (243)
T TIGR01978 234 E 234 (243)
T ss_pred c
Confidence 3
No 311
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=2.1e-37 Score=355.93 Aligned_cols=231 Identities=22% Similarity=0.331 Sum_probs=189.9
Q ss_pred cEEEEEEEEEecCC-------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh-
Q 000503 1222 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV- 1293 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~- 1293 (1459)
.|+++||+++|+.. .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38999999999741 3569999999999999999999999999999999999999999999999999988765
Q ss_pred --HHHhcccEEEeCCCc--CC-CccHHHhcCcC-CCCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHH
Q 000503 1294 --RDLRGRFAVVPQSPF--LF-EGSLRDNLDPF-HMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1294 --~~lR~~i~~VpQdp~--lf-~gTIReNLdp~-~~~~d~ei~~aL~~~~l~~~i~~lGLdt-~v~e~G~~LSgGQrQrl 1366 (1459)
..+|++++|+||++. ++ ..|+++|+... ....+ +...-....+.+.++.+|+++ ..+.....||+|||||+
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl 160 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLS--LDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRV 160 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhcc--CCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHH
Confidence 346889999999983 44 36899997431 10000 001111223456666678874 56777789999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
+|||||+++|+||||||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 161 CLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhcc
Confidence 999999999999999999999999999999999987643 7899999999999986 8999999999999999999998
Q ss_pred ccCCcHHHHHHH
Q 000503 1444 QDECSVFSSFVR 1455 (1459)
Q Consensus 1444 ~~~~~~f~~l~~ 1455 (1459)
.. ++.|..-+.
T Consensus 241 ~~-~~~~~~~~~ 251 (268)
T PRK10419 241 TF-SSPAGRVLQ 251 (268)
T ss_pred CC-CCHHHHHHH
Confidence 64 445554443
No 312
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.3e-37 Score=349.43 Aligned_cols=212 Identities=27% Similarity=0.372 Sum_probs=173.7
Q ss_pred EEEEEEEEEecCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC---CCCceEEECCEeCCCCChHHHh
Q 000503 1223 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLR 1297 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR 1297 (1459)
++|+||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999755 3679999999999999999999999999999999999999 99999999999885 34678
Q ss_pred cccEEEeCCCcCCCc-cHHHhcCcCCCC-ChHHHHHHHHHhcHHH-HHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1298 GRFAVVPQSPFLFEG-SLRDNLDPFHMN-DDLKIWSVLEKCHVKE-EVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1298 ~~i~~VpQdp~lf~g-TIReNLdp~~~~-~d~ei~~aL~~~~l~~-~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
++++++||++.+|++ |++||+.+.... .........+.....+ .++.++++.........||+|||||++||||+++
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 160 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQLLW 160 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHHHHHHHHHHh
Confidence 899999999999987 999999743110 0000011111111222 3444466655566667899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccCh-hhHh-hcCEEEEEeCCeEEEec
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRI-STVL-NMDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl-~ti~-~~DrIlVl~~G~IvE~G 1437 (1459)
+|+||||||||++||+.+.+.+.+.|++.. +++|+|+++|++ +.+. .||+|++|++|++++.|
T Consensus 161 ~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 161 DPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999998764 478999999998 4554 58999999999999876
No 313
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-37 Score=353.09 Aligned_cols=205 Identities=28% Similarity=0.360 Sum_probs=173.2
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 4699999999999999999999999999999999999999999999999998642 346899
Q ss_pred EeCCCcCCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf~-gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||++.+|+ .|+++|+.+.. .....+. .....+.++.+|++........+||||||||++|||||+++|++
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~l 149 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQR-----LEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQL 149 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHH-----HHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999887 59999996431 1121111 11233445555776656666778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEe--CCeEEEecCh
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILD--HGHLVEQGNP 1439 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~--~G~IvE~G~p 1439 (1459)
|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|+ +|++++.+++
T Consensus 150 llLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 150 LLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999998863 38999999999999876 89999998 5999998764
No 314
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-37 Score=366.80 Aligned_cols=212 Identities=24% Similarity=0.369 Sum_probs=181.2
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCC----ChHHHhc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRDLRG 1298 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~lR~ 1298 (1459)
|++ |++++|+.. .+ |+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +....|+
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 23 99999999999999999999999999999999999999999999998753 2445688
Q ss_pred ccEEEeCCCcCCCc-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1299 RFAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1299 ~i~~VpQdp~lf~g-TIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+++|+||++.+|+. |+++|+.+... ..++++. +.++.+|++........+||||||||++|||||+++|
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~---------~~l~~~gl~~~~~~~~~~LSgGq~qRvalaraL~~~p 147 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFD---------KIVALLGIEPLLDRYPGSLSGGEKQRVAIGRALLTAP 147 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHH---------HHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999975 99999975422 1223333 3344446666666667789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCc
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1448 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~ 1448 (1459)
++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++..
T Consensus 148 ~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~ 222 (352)
T PRK11144 148 ELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAM 222 (352)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcch
Confidence 99999999999999999999999987653 6899999999998876 899999999999999999999988753
No 315
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=3.6e-37 Score=352.09 Aligned_cols=226 Identities=22% Similarity=0.365 Sum_probs=187.2
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEe-----CCCCChHH-
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN-----IINTPVRD- 1295 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~d-----i~~i~~~~- 1295 (1459)
.|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +...+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 4899999999964 358999999999999999999999999999999999999999999999988 77766543
Q ss_pred ---HhcccEEEeCCCc--C-CCccHHHhcCc----CCCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000503 1296 ---LRGRFAVVPQSPF--L-FEGSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1364 (1459)
Q Consensus 1296 ---lR~~i~~VpQdp~--l-f~gTIReNLdp----~~~~~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~~LSgGQrQ 1364 (1459)
+++.++++||+|. + +..|+.+|+.. .......+. ...+.+.++.+|++ +..+.....|||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~q 155 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQ 155 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHcCCChhhhhcCchhcCHHHHH
Confidence 3467999999985 2 33588888732 111111111 12344566667886 5677788899999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhH
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1441 (1459)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1441 (1459)
|++|||||+++|++|||||||++||+.+.+.+.+.|++.. .+.|+|+|+|+++.+.. ||++++|++|++++.|++++
T Consensus 156 rv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~~~ 235 (253)
T TIGR02323 156 RLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLTDQ 235 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999998764 37899999999999986 89999999999999999999
Q ss_pred HhccCCcHHHHHH
Q 000503 1442 LLQDECSVFSSFV 1454 (1459)
Q Consensus 1442 Ll~~~~~~f~~l~ 1454 (1459)
+..++...|.+++
T Consensus 236 ~~~~~~~~~~~~~ 248 (253)
T TIGR02323 236 VLDDPQHPYTQLL 248 (253)
T ss_pred HhcCCCCHHHHHH
Confidence 9876655555544
No 316
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=3.2e-37 Score=367.30 Aligned_cols=216 Identities=23% Similarity=0.361 Sum_probs=182.8
Q ss_pred EEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCC----hHHHhcccEE
Q 000503 1227 NVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP----VRDLRGRFAV 1302 (1459)
Q Consensus 1227 nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~----~~~lR~~i~~ 1302 (1459)
|++++|+.. .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|++++|
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 899999642 35 999999999999999999999999999999999999999999999986542 3456889999
Q ss_pred EeCCCcCCCc-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1380 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1380 (1459)
+||++.+|++ |++||+.+... ....+. +....+.++.+|++...+.....||||||||++|||||+++|++||
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~-----~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lll 154 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSER-----RISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLL 154 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHH-----HHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999986 99999975322 111111 1123445555677777777778999999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000503 1381 LDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1451 (1459)
Q Consensus 1381 LDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1451 (1459)
|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|.
T Consensus 155 LDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~ 228 (354)
T TIGR02142 155 MDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPWL 228 (354)
T ss_pred EcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCcccc
Confidence 9999999999999999999988643 7899999999999876 899999999999999999999987765443
No 317
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.2e-38 Score=324.22 Aligned_cols=225 Identities=24% Similarity=0.388 Sum_probs=195.1
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hcc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGR 1299 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~ 1299 (1459)
+.+..+|+..+|.. .+|+++|||++++||.||+.|||||||||.+.++.|+..|++|+|.+||.||+.+|.+.- |-.
T Consensus 3 ~~L~a~~l~K~y~k--r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKK--RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCC--eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 45788999999964 469999999999999999999999999999999999999999999999999999998763 446
Q ss_pred cEEEeCCCcCCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1300 FAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1300 i~~VpQdp~lf~g-TIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
|+|+||||.+|.+ ||+|||...-+..+.+.+.+-++..+.+.++.+.+...-...|..||||||+|+-|||||..+|+.
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~f 160 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAANPKF 160 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhcCCCE
Confidence 9999999999987 999998643333222223344555566677777787777888889999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChh-hHhhcCEEEEEeCCeEEEecChhHHhccCC
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIS-TVLNMDEILILDHGHLVEQGNPQTLLQDEC 1447 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~-ti~~~DrIlVl~~G~IvE~G~p~eLl~~~~ 1447 (1459)
++||||.|++|+-+-..||+.|+... +|--|++.-|... |+.-|||.+++.+|+|...|+|+|+.+|+.
T Consensus 161 iLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~~ 231 (243)
T COG1137 161 ILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNED 231 (243)
T ss_pred EEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcChh
Confidence 99999999999999999999998764 4778999999976 566699999999999999999999999864
No 318
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.9e-37 Score=348.36 Aligned_cols=212 Identities=29% Similarity=0.449 Sum_probs=185.0
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|+++.|.... .++++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 1 i~~~~l~~~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (237)
T cd03252 1 ITFEHVRFRYKPDG----PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRR 76 (237)
T ss_pred CEEEEEEEecCCCC----ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhh
Confidence 35788999885321 2359999999999999999999999999999999999999999999876
Q ss_pred cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccC
Q 000503 673 SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 751 (1459)
Q Consensus 673 ~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 751 (1459)
.++|++|++++++.|++||+.++.. ...++..+.++..++.+-++.+|.|.++..+..+.+|||||||||+||||++.+
T Consensus 77 ~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~ 156 (237)
T cd03252 77 QVGVVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHN 156 (237)
T ss_pred cEEEEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhC
Confidence 3899999999999999999988653 344455556666777777888888988888899999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhc
Q 000503 752 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 823 (1459)
Q Consensus 752 ~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 823 (1459)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 157 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (237)
T cd03252 157 PRILIFDEATSALDYESEHAIMRN-MHD-ICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE 226 (237)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc
Confidence 999999999999999999988876 333 3457899999999999988999999999999999999887654
No 319
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=4.3e-37 Score=353.00 Aligned_cols=229 Identities=25% Similarity=0.404 Sum_probs=185.4
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCC---CceEEECCEeCCCC-----Ch
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC---GGQILVDGLNIINT-----PV 1293 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~---~G~I~IDG~di~~i-----~~ 1293 (1459)
-++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 4899999999963 46999999999999999999999999999999999999986 49999999998654 24
Q ss_pred HHHhcccEEEeCCCcCCCc-cHHHhcCcCCCC-ChH-----HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000503 1294 RDLRGRFAVVPQSPFLFEG-SLRDNLDPFHMN-DDL-----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp~lf~g-TIReNLdp~~~~-~d~-----ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl 1366 (1459)
..+|++++|+||++.+|++ |+++|+...... .+. .....-.+....+.++.+|++.........||+|||||+
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv 161 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRV 161 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCccccCHHHHHHH
Confidence 5678899999999998875 999999643110 000 000000111233445555776666677778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
+||||++.+|++|||||||++||.++.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 162 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~- 240 (262)
T PRK09984 162 AIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQF- 240 (262)
T ss_pred HHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHh-
Confidence 99999999999999999999999999999999998874 37899999999998755 899999999999999999997
Q ss_pred ccCCcHHHHHHH
Q 000503 1444 QDECSVFSSFVR 1455 (1459)
Q Consensus 1444 ~~~~~~f~~l~~ 1455 (1459)
.+ ....+++.
T Consensus 241 ~~--~~~~~~~~ 250 (262)
T PRK09984 241 DN--ERFDHLYR 250 (262)
T ss_pred cc--HHHHHHHh
Confidence 32 24555553
No 320
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.2e-37 Score=342.07 Aligned_cols=201 Identities=22% Similarity=0.371 Sum_probs=171.0
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++||+++|+. .++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ .+|++++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999962 568999999999999999999999999999999999999999999999987644 46788999
Q ss_pred EeCCCcCCCc-cHHHhcCcC-CC-C-----ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1303 VPQSPFLFEG-SLRDNLDPF-HM-N-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~-~~-~-----~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
+||+|.+|.+ |++||+... .. . .++++.++++ .+|++........+||+|||||++||||+++
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~---------~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 145 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQ---------QVGIADYLDRLPEQLSGGQRQRVALARCLVR 145 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHH---------HcCcHHHhhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999975 999998632 11 1 1123333344 4455544555566899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecC
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1438 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~ 1438 (1459)
+|+|+||||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|.
T Consensus 146 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 146 PNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999988643 7899999999999876 89999999999999875
No 321
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.1e-37 Score=346.32 Aligned_cols=206 Identities=25% Similarity=0.348 Sum_probs=176.4
Q ss_pred EEEEEEEEEecCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HHh
Q 000503 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1297 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1297 (1459)
++++|++++|+++. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996432 4699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cccEEEeCCCcCCC-ccHHHhcCcCCC----CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000503 1298 GRFAVVPQSPFLFE-GSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1459)
Q Consensus 1298 ~~i~~VpQdp~lf~-gTIReNLdp~~~----~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1459)
+.++|+||+|.+|. .|+.+|+.+... .+.++..+ ...+.++.+|++........+||+|||||++||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~laral 156 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARE-----RARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIARAL 156 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHH
Confidence 89999999999987 699999975321 12222211 233455556777777777788999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCeE
Q 000503 1373 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHL 1433 (1459)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlVl~~G~I 1433 (1459)
+++|++|||||||++||.++.+.+.+.|++..+ ++|+|+|+|+++....||+|++|++|++
T Consensus 157 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 157 VHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999988653 7999999999998777999999999986
No 322
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-37 Score=340.02 Aligned_cols=202 Identities=29% Similarity=0.391 Sum_probs=168.8
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
|.+++.+..|.. ..+++|||++|+.||++++.|||||||||||++|+|+..|++|.|.++|
T Consensus 3 i~i~~~~~~~~~------~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~ 76 (345)
T COG1118 3 IRINNVKKRFGA------FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRD 76 (345)
T ss_pred eeehhhhhhccc------ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhh
Confidence 456666666653 2348999999999999999999999999999999999999999999987
Q ss_pred -cEEEEcCCCCCCC-CCHHHHhccCCCCC---------HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 -SIAYVPQVPWILS-GTIRDNILFGKNYD---------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~-~ti~~nI~~g~~~~---------~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
+||||.|+.-||. .||.|||.||.+.. ..+..+.++.|.|+.--+ .....||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~-----------ryP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLAD-----------RYPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhh-----------cCchhcChHHHHH
Confidence 5999999999885 59999999996322 345667788888865333 3456899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 820 (1459)
|||||||..+|++|||||||+|||++..+.+-..+..-...-+.|+++|||+.++.. .||+|++|++|+|...|+++|+
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 999999999999999999999999999888776633221223679999999998855 5999999999999999999999
Q ss_pred Hhcc
Q 000503 821 AVSL 824 (1459)
Q Consensus 821 ~~~~ 824 (1459)
....
T Consensus 226 ~~~P 229 (345)
T COG1118 226 YDHP 229 (345)
T ss_pred hcCC
Confidence 6543
No 323
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-37 Score=357.91 Aligned_cols=203 Identities=28% Similarity=0.396 Sum_probs=174.3
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|++-+|.. ..+++|+||+|++||++++.|||||||||+|++|+|+.+|++|+|.++|
T Consensus 4 ~~l~i~~v~k~yg~------~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR 77 (352)
T COG3842 4 PALEIRNVSKSFGD------FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKR 77 (352)
T ss_pred ceEEEEeeeeecCC------eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhc
Confidence 46889999988862 2359999999999999999999999999999999999999999999987
Q ss_pred cEEEEcCCCCCCC-CCHHHHhccCCCC----C-H---HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHH
Q 000503 673 SIAYVPQVPWILS-GTIRDNILFGKNY----D-P---QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1459)
Q Consensus 673 ~i~y~~Q~~~l~~-~ti~~nI~~g~~~----~-~---~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRva 743 (1459)
.|++|+|+--||. .||+|||.||... . + +++.++++..+|+.--. .+...||||||||||
T Consensus 78 ~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~-----------R~p~qLSGGQqQRVA 146 (352)
T COG3842 78 PIGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFAD-----------RKPHQLSGGQQQRVA 146 (352)
T ss_pred ccceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhh-----------hChhhhChHHHHHHH
Confidence 5999999999996 4999999999652 2 2 36777777777765333 456699999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcch-hhcCCEEEEEeCCeEEEecCHHHHHh
Q 000503 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~-l~~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
|||||..+|+++|||||+||||.+..+++-..+.......|.|.|+|||+.+. +..+|+|.+|++|+|...|+++|+..
T Consensus 147 LARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~ 226 (352)
T COG3842 147 LARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYE 226 (352)
T ss_pred HHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhh
Confidence 99999999999999999999999998887766433323447899999999876 66799999999999999999999965
Q ss_pred c
Q 000503 823 S 823 (1459)
Q Consensus 823 ~ 823 (1459)
.
T Consensus 227 ~ 227 (352)
T COG3842 227 R 227 (352)
T ss_pred C
Confidence 4
No 324
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-37 Score=343.94 Aligned_cols=211 Identities=28% Similarity=0.440 Sum_probs=187.6
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|... .++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~-----~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (229)
T cd03254 2 EIEFENVNFSYDEK-----KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLR 76 (229)
T ss_pred eEEEEEEEEecCCC-----CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHh
Confidence 46889999998531 2359999999999999999999999999999999999999999999875
Q ss_pred -cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHcc
Q 000503 673 -SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 750 (1459)
.++|++|+++++++|++||+.++.+ ...++..+.++.++++..++.+|.|.++..+....+|||||||||+||||+++
T Consensus 77 ~~i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~ 156 (229)
T cd03254 77 SMIGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLR 156 (229)
T ss_pred hhEEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 3899999999999999999998754 34556677788889988899999999999999999999999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000503 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 751 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.++.||++++|++|++.+.|+.+++..
T Consensus 157 ~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 157 DPKILILDEATSNIDTETEKLIQEA-LEK-LMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 9999999999999999999988776 433 345789999999999998899999999999999998887754
No 325
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-37 Score=328.54 Aligned_cols=171 Identities=44% Similarity=0.760 Sum_probs=161.8
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|+...+++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999997543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000503 1303 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1459)
Q Consensus 1303 VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1459)
+||+|.+|+.|++||+ ||+|||||++||||++++|++||||
T Consensus 81 ~~~~~~~~~~t~~e~l---------------------------------------LS~G~~~rl~la~al~~~p~llllD 121 (171)
T cd03228 81 VPQDPFLFSGTIRENI---------------------------------------LSGGQRQRIAIARALLRDPPILILD 121 (171)
T ss_pred EcCCchhccchHHHHh---------------------------------------hCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999997 9999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCe
Q 000503 1383 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGH 1432 (1459)
Q Consensus 1383 EaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~ 1432 (1459)
|||++||.++.+.+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 122 EP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 122 EATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred CCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 99999999999999999988767899999999999998899999999985
No 326
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.4e-36 Score=347.50 Aligned_cols=214 Identities=27% Similarity=0.359 Sum_probs=191.0
Q ss_pred CceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000503 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1459)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1459)
...++++|+++.|+.. . ..+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 17 ~~~i~~~~l~~~~~~~-~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~ 92 (257)
T cd03288 17 GGEIKIHDLCVRYENN-L---KPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHT 92 (257)
T ss_pred CceEEEEEEEEEeCCC-C---CcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHH
Confidence 4568999999999642 1 2359999999999999999999999999999999999999999999875
Q ss_pred ---cEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHc
Q 000503 673 ---SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 749 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly 749 (1459)
.++||+|+|+++++|++||+........+.+.++++..++...++.+|.|.++.+++.+.+||||||||++||||++
T Consensus 93 ~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 93 LRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred HhhhEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 48999999999999999999766544556677788888998889999999999999999999999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000503 750 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 750 ~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
++|++++|||||++||+++.+.+++. +.. +.++.|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~-l~~-~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 243 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKV-VMT-AFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLA 243 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHH-HHH-hcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999998877765 433 345789999999999998999999999999999999988754
No 327
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=9.5e-37 Score=341.84 Aligned_cols=204 Identities=31% Similarity=0.407 Sum_probs=174.0
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ++++++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 478999999964 46999999999999999999999999999999999999999999999999876422 357999
Q ss_pred EeCCCcCCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf~-gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||++.+|. .|+++|+.+.. ..+++++.++++.. |++........+||+|||||++||||++++|++
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~~rv~laral~~~p~l 145 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIV---------DLTNTGKKKAKQFSLGMKQRLGIAIALLNHPKL 145 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHc---------CCcHHHhhhHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998886 59999986421 22333444444444 554444555568999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhH
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1441 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~e 1441 (1459)
|+|||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||||++|++|++++.|++.+
T Consensus 146 lllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 146 LILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred EEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999999999998764 47899999999999865 89999999999999999876
No 328
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.5e-36 Score=340.00 Aligned_cols=206 Identities=32% Similarity=0.443 Sum_probs=184.9
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|+... +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 77 (221)
T cd03244 2 DIEFKNVSLRYRPNL----PPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLR 77 (221)
T ss_pred cEEEEEEEEecCCCC----cccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHh
Confidence 368899999996321 2469999999999999999999999999999999999999999998875
Q ss_pred -cEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccC
Q 000503 673 -SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 751 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 751 (1459)
.++|++|+|.++++|++|||.+......++..+.++..++.+.+..+|.|.++..+..+.+||||||||++||||++.+
T Consensus 78 ~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~ 157 (221)
T cd03244 78 SRISIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRK 157 (221)
T ss_pred hhEEEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999987666667777888888999988999999999999999999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecC
Q 000503 752 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1459)
Q Consensus 752 ~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~ 816 (1459)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..||++++|++|++++.|+
T Consensus 158 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 158 SKILVLDEATASVDPETDALIQKT-IRE-AFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999998888776 433 344689999999999998999999999999988765
No 329
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-36 Score=337.05 Aligned_cols=224 Identities=27% Similarity=0.456 Sum_probs=180.8
Q ss_pred EEEEEEEEEecCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC-C----CCceEEECCEeCCCCChHH
Q 000503 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-I----CGGQILVDGLNIINTPVRD 1295 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-~----~~G~I~IDG~di~~i~~~~ 1295 (1459)
++++|++..|.... ..+++||||+|++||.+||||.|||||||+.++++|+++ | .+|+|.+||.|+.+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 67899999997543 368999999999999999999999999999999999998 3 5799999999999999875
Q ss_pred H---h-cccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHh-----------cHHHHHHhCCCch---hhhcCCCC
Q 000503 1296 L---R-GRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKC-----------HVKEEVEAVGLET---FVKESGIS 1357 (1459)
Q Consensus 1296 l---R-~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~-----------~l~~~i~~lGLdt---~v~e~G~~ 1357 (1459)
+ | +.|++|||||. .-|+|..... +++.++++.- ...+.++..|++. .+..-...
T Consensus 82 ~~~iRG~~I~mIfQ~p~-------~sLnPv~~Ig-~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPM-------TSLNPVMTIG-DQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCch-------hhcCChhhHH-HHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcc
Confidence 4 3 47999999995 1122221111 1222222210 0112223335543 45666778
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEE
Q 000503 1358 FSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLV 1434 (1459)
Q Consensus 1358 LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~Iv 1434 (1459)
||||||||+.||-||+.+|++||-||||++||..+.+.|.+.|++.. .+.|+|+|||++..+.. ||||+||.+|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 99999999999999999999999999999999999999999998765 48999999999999876 8999999999999
Q ss_pred EecChhHHhccCCcHHHHHH
Q 000503 1435 EQGNPQTLLQDECSVFSSFV 1454 (1459)
Q Consensus 1435 E~G~p~eLl~~~~~~f~~l~ 1454 (1459)
|.|+.+++++++...|.+.+
T Consensus 234 E~g~~~~i~~~P~HPYT~~L 253 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGL 253 (316)
T ss_pred EeCCHHHHhcCCCChHHHHH
Confidence 99999999999987776544
No 330
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=342.83 Aligned_cols=211 Identities=31% Similarity=0.484 Sum_probs=186.5
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------c
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 673 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 673 (1459)
+++|+++.|.... .++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (234)
T cd03251 2 EFKNVTFRYPGDG----PPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQ 77 (234)
T ss_pred EEEEEEEEeCCCC----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhh
Confidence 5788888885321 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCC
Q 000503 674 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 752 (1459)
Q Consensus 674 i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~ 752 (1459)
++|++|+|++++.|++||+.++.. +.++.+.+.++.+.+.+.++.+|.|.++..+....+||||||||++||||++.+|
T Consensus 78 i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 157 (234)
T cd03251 78 IGLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDP 157 (234)
T ss_pred EEEeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 899999999999999999998743 4556667777888888889999988888899999999999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHhc
Q 000503 753 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 823 (1459)
Q Consensus 753 ~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 823 (1459)
+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 158 ~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 158 PILILDEATSALDTESERLVQAA-LER-LMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred CEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 99999999999999999988776 433 3457899999999999988999999999999999998887644
No 331
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-36 Score=327.00 Aligned_cols=170 Identities=32% Similarity=0.562 Sum_probs=157.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGK--KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 478999999964 35999999999999999999999999999999999999999999999999998766 677889999
Q ss_pred EeCCCcCCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000503 1303 VPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1381 (1459)
Q Consensus 1303 VpQdp~lf~g-TIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1381 (1459)
+||+|.+|.+ |+++|+. ||+|||||++||||++++|+|+||
T Consensus 78 ~~q~~~~~~~~tv~~~~~--------------------------------------LS~G~~qrv~laral~~~p~illl 119 (173)
T cd03230 78 LPEEPSLYENLTVRENLK--------------------------------------LSGGMKQRLALAQALLHDPELLIL 119 (173)
T ss_pred EecCCccccCCcHHHHhh--------------------------------------cCHHHHHHHHHHHHHHcCCCEEEE
Confidence 9999999887 9999973 999999999999999999999999
Q ss_pred eccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeE
Q 000503 1382 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1433 (1459)
Q Consensus 1382 DEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~I 1433 (1459)
||||++||..+.+.+.+.|++.. ++.|+|++||+.+.+.. ||+|++|++|++
T Consensus 120 DEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 120 DEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 99999999999999999998864 46899999999999885 899999999974
No 332
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=1.5e-36 Score=333.76 Aligned_cols=185 Identities=23% Similarity=0.353 Sum_probs=163.8
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcc--CCCCCceEEECCEeCCCCChHHH-hcc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL--TPICGGQILVDGLNIINTPVRDL-RGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl--~~~~~G~I~IDG~di~~i~~~~l-R~~ 1299 (1459)
++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999963 4699999999999999999999999999999999999 58999999999999998876554 556
Q ss_pred cEEEeCCCcCCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1300 FAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1300 i~~VpQdp~lf~g-TIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
++|+||+|.+|++ |+++|++ ....+||+|||||++||||++++|+|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~---------------------------------~~~~~LS~G~~qrv~laral~~~p~i 125 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR---------------------------------YVNEGFSGGEKKRNEILQLLLLEPDL 125 (200)
T ss_pred EEEeecChhhccCccHHHHHh---------------------------------hccccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999886 5666550 01136999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh--hcCEEEEEeCCeEEEecChhHHh
Q 000503 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL--NMDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~--~~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
++|||||++||.++.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.| +.|+.
T Consensus 126 lllDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 126 AILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999998764 3789999999999998 58999999999999999 55564
No 333
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=338.90 Aligned_cols=203 Identities=26% Similarity=0.391 Sum_probs=171.3
Q ss_pred EEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCC----ChHHHhcc
Q 000503 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRDLRGR 1299 (1459)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~lR~~ 1299 (1459)
.+ |++++|+.. .+ |+||+|++ |++||+|+||||||||+++|.|+++|++|+|.+||.++... +....|++
T Consensus 3 ~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 76 (214)
T cd03297 3 CV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRK 76 (214)
T ss_pred ee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhc
Confidence 45 899999753 34 99999999 99999999999999999999999999999999999998643 33457889
Q ss_pred cEEEeCCCcCCCc-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1300 FAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1300 i~~VpQdp~lf~g-TIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
++|+||++.+|++ |+++|+..... ..+++ .+....+.++.+|++.........||||||||++||||++++|+
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 151 (214)
T cd03297 77 IGLVFQQYALFPHLNVRENLAFGLKRKRNRE-----DRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQPE 151 (214)
T ss_pred EEEEecCCccCCCCCHHHHHHHHHhhCCHHH-----HHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999864 99999975321 11111 11223445556677777777788999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
|+||||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 152 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 152 LLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999987643 7899999999999865 8999999999999876
No 334
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-36 Score=327.97 Aligned_cols=172 Identities=33% Similarity=0.510 Sum_probs=159.3
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCC--hHHHhccc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--VRDLRGRF 1300 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~--~~~lR~~i 1300 (1459)
|+++|++++|+. .++++|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 46999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1459)
+|+||+|.+|.+ |+++|+... ||+|||||++||||++++|+++
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~------------------------------------lS~G~~qr~~la~al~~~p~ll 122 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG------------------------------------LSGGQQQRVALARALAMDPDVL 122 (178)
T ss_pred EEEecCCccCCCCCHHHheeec------------------------------------CCHHHHHHHHHHHHHHCCCCEE
Confidence 999999998865 999998653 9999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCe
Q 000503 1380 CLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGH 1432 (1459)
Q Consensus 1380 lLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~ 1432 (1459)
||||||++||..+.+.+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 123 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 123 LLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 99999999999999999999987654 6899999999999985 89999999985
No 335
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-37 Score=337.81 Aligned_cols=203 Identities=30% Similarity=0.409 Sum_probs=175.1
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.+.++|.+|.|+.+ .++|+|+||++++|+.++|+|+||||||||++.+.|.++|++|.|.++|
T Consensus 3 ~i~~~~l~~~y~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~ 77 (235)
T COG1122 3 MIEAENLSFRYPGR-----KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLEL 77 (235)
T ss_pred eEEEEEEEEEcCCC-----ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHh
Confidence 46789999999754 3459999999999999999999999999999999999999999998866
Q ss_pred --cEEEEcCCC--CCCCCCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 --SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 --~i~y~~Q~~--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
++|||.|+| .++..||.|.|.||.. .++ ++.+++++.|++.+..+.. ..+||||||||
T Consensus 78 ~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----------p~~LSGGqkqR 146 (235)
T COG1122 78 RQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRP-----------PFNLSGGQKQR 146 (235)
T ss_pred hcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCC-----------ccccCCcceee
Confidence 499999999 6889999999999853 333 4567788888887664433 45999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 820 (1459)
||||.+|..+|++++||||||+||+...+.+++.+..-....++|+|++||+++.+.. ||++++|++|+++.+|++.++
T Consensus 147 vaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i 226 (235)
T COG1122 147 VAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEI 226 (235)
T ss_pred HHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHH
Confidence 9999999999999999999999999999999886332212336899999999999876 999999999999999999887
Q ss_pred Hhc
Q 000503 821 AVS 823 (1459)
Q Consensus 821 ~~~ 823 (1459)
.+.
T Consensus 227 ~~~ 229 (235)
T COG1122 227 FND 229 (235)
T ss_pred hhh
Confidence 643
No 336
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-37 Score=323.79 Aligned_cols=201 Identities=24% Similarity=0.379 Sum_probs=170.0
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|++-.|+.. ..+|+||||+|++||+++|+|+|||||||||++|.|..+|++|+|.++|
T Consensus 3 ~i~~~nl~k~yp~~-----~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr 77 (258)
T COG3638 3 MIEVKNLSKTYPGG-----HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELR 77 (258)
T ss_pred eEEEeeeeeecCCC-----ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHH
Confidence 57899999999743 3459999999999999999999999999999999999999999999876
Q ss_pred ----cEEEEcCCCCCCCC-CHHHHhccCCC------------CCHHHHHHHHH---HhcchhhHhhccCCCcccccCCCc
Q 000503 673 ----SIAYVPQVPWILSG-TIRDNILFGKN------------YDPQSYSETLK---ACTLDVDISLMVGGDMAYIGEKGV 732 (1459)
Q Consensus 673 ----~i~y~~Q~~~l~~~-ti~~nI~~g~~------------~~~~~~~~v~~---~~~l~~di~~~~~gd~t~ig~~g~ 732 (1459)
.|||++|++.|.+. ||.+|++.|+- ++++....+++ ..++.+. .-.+..
T Consensus 78 ~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~-----------A~qra~ 146 (258)
T COG3638 78 KLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK-----------AYQRAS 146 (258)
T ss_pred HHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH-----------HHHHhc
Confidence 59999999998765 99999998742 33444444333 3333322 234567
Q ss_pred ccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeE
Q 000503 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQV 811 (1459)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i 811 (1459)
+|||||+|||+|||||+++|+|+|-|||+++|||.+++++++.+..-....|.|+|+.-|++++.. +||||+-|++|+|
T Consensus 147 ~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~i 226 (258)
T COG3638 147 TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRI 226 (258)
T ss_pred cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcE
Confidence 999999999999999999999999999999999999999999744333556889999999999976 5999999999999
Q ss_pred EEecCHHHHH
Q 000503 812 KWIGSSADLA 821 (1459)
Q Consensus 812 ~~~g~~~~l~ 821 (1459)
+..|+.+|+.
T Consensus 227 vfDg~~~el~ 236 (258)
T COG3638 227 VFDGPASELT 236 (258)
T ss_pred EEeCChhhhh
Confidence 9999998864
No 337
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=324.55 Aligned_cols=207 Identities=28% Similarity=0.361 Sum_probs=172.2
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|.++.|.... ...++|+||||++.+||..+|+|+||||||||.++|+|..+|++|+|.++|
T Consensus 3 ~l~v~nl~~~y~~~~--~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~ 80 (252)
T COG1124 3 LLSVRNLSIVYGGGK--FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAF 80 (252)
T ss_pred eEEEeceEEEecCCc--chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhh
Confidence 478899999987542 122579999999999999999999999999999999999999999999987
Q ss_pred --cEEEEcCCCCC-C--CCCHHHHhccCC-----CCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHH
Q 000503 673 --SIAYVPQVPWI-L--SGTIRDNILFGK-----NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1459)
Q Consensus 673 --~i~y~~Q~~~l-~--~~ti~~nI~~g~-----~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRv 742 (1459)
.|-+|+|+|.- + .-||++-|.-+- +-.+++..++++..+|..... ......|||||||||
T Consensus 81 ~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l----------~R~P~eLSGGQ~QRi 150 (252)
T COG1124 81 YRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFL----------DRRPHELSGGQRQRI 150 (252)
T ss_pred ccceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHH----------hcCchhcChhHHHHH
Confidence 38899999972 2 348888875332 122345777888888866432 344568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHH
Q 000503 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1459)
Q Consensus 743 alARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 821 (1459)
||||||..+|+++|||||||+||+.+...|++-+..-...++-|.|+|||++..+.+ ||||++|++|++++.++.+++.
T Consensus 151 aIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~ 230 (252)
T COG1124 151 AIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELL 230 (252)
T ss_pred HHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhh
Confidence 999999999999999999999999999999986443323456699999999999987 9999999999999999988886
Q ss_pred hc
Q 000503 822 VS 823 (1459)
Q Consensus 822 ~~ 823 (1459)
..
T Consensus 231 ~~ 232 (252)
T COG1124 231 SH 232 (252)
T ss_pred cC
Confidence 43
No 338
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=333.97 Aligned_cols=190 Identities=24% Similarity=0.342 Sum_probs=162.2
Q ss_pred cEEEEEEEEEecCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCC---CCCceEEECCEeCCCCChHHH
Q 000503 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDL 1296 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~l 1296 (1459)
.+.++||+|.|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 47899999999753 4579999999999999999999999999999999999999 89999999999998765 457
Q ss_pred hcccEEEeCCCcCCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000503 1297 RGRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1459)
Q Consensus 1297 R~~i~~VpQdp~lf~g-TIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1459)
|++++|+||++.+|.+ |+++|+.+.... . ..+....||+|||||++||||++++
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~----------------~~~~~~~LS~Ge~qrl~laral~~~ 136 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K----------------GNEFVRGISGGERKRVSIAEALVSR 136 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c----------------cccchhhCCHHHHHHHHHHHHHhhC
Confidence 8899999999988875 999999643110 0 1223346999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEec-cChhhHh-hcCEEEEEeCCeEEEec
Q 000503 1376 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIA-HRISTVL-NMDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~Ia-Hrl~ti~-~~DrIlVl~~G~IvE~G 1437 (1459)
|+||||||||++||+++.+.+.+.|++..+ +.|+|+++ |+.+.+. .||+|++|++|++++.|
T Consensus 137 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 137 ASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999988653 46766655 5566665 58999999999998865
No 339
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=3.2e-36 Score=342.06 Aligned_cols=208 Identities=26% Similarity=0.411 Sum_probs=176.8
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 4899999999964 3699999999999999999999999999999999999999999999987 35799
Q ss_pred EEeCCCcCCC---ccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1302 VVPQSPFLFE---GSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1302 ~VpQdp~lf~---gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
|+||+|.++. .|+++|+......+++++.++++.+++.+. .......||||||||++||||++++|++
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~---------~~~~~~~LSgGq~qrv~laral~~~p~l 141 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHL---------IDAPMQKLSGGETQRVLLARALLNRPQL 141 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHH---------HhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999998765 389999754333345566666666655443 3444567999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000503 1379 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1454 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1454 (1459)
|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++ ++++.|+++++.++ ..|.+++
T Consensus 142 llLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~~--~~~~~~~ 217 (251)
T PRK09544 142 LVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSLH--PEFISMF 217 (251)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhCC--HHHHHHh
Confidence 999999999999999999999987643 7899999999999865 899999965 79999999998753 3566665
No 340
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3e-36 Score=341.35 Aligned_cols=211 Identities=30% Similarity=0.482 Sum_probs=184.5
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------c
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 673 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 673 (1459)
+++|+++.|+.... .++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 2 ~i~~l~~~~~~~~~---~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (238)
T cd03249 2 EFKNVSFRYPSRPD---VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQ 78 (238)
T ss_pred eEEEEEEecCCCCC---ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhh
Confidence 57888888864211 2459999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCC
Q 000503 674 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 752 (1459)
Q Consensus 674 i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~ 752 (1459)
++|++|+|++++.|++||+.++.. ...++..+.++.+++...+..+|.|.++..+....+||||||||++||||++.+|
T Consensus 79 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p 158 (238)
T cd03249 79 IGLVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNP 158 (238)
T ss_pred EEEECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCC
Confidence 999999999998999999998753 3445556677778888888899999888888999999999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000503 753 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 753 ~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
+++||||||++||+...+.+.+. +.. ..+++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 159 ~llllDEP~~gLD~~~~~~l~~~-l~~-~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (238)
T cd03249 159 KILLLDEATSALDAESEKLVQEA-LDR-AMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA 226 (238)
T ss_pred CEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh
Confidence 99999999999999999988876 433 236789999999999998999999999999999998877653
No 341
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-36 Score=340.45 Aligned_cols=209 Identities=31% Similarity=0.482 Sum_probs=184.7
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------c
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 673 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 673 (1459)
+++|+++.|+.. ..+++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~ 76 (236)
T cd03253 2 EFENVTFAYDPG-----RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRA 76 (236)
T ss_pred EEEEEEEEeCCC-----CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhh
Confidence 578889988531 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCC
Q 000503 674 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 752 (1459)
Q Consensus 674 i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~ 752 (1459)
++|++|+|++++.|++||+.++.. ..++...+.++.+++...+..+|.|.++.++.+..+||||||||++||||++.+|
T Consensus 77 i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p 156 (236)
T cd03253 77 IGVVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNP 156 (236)
T ss_pred EEEECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 899999999999999999998753 3444556677888888888999999999999999999999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000503 753 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 753 ~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..||++++|++|++.+.|+.+++..
T Consensus 157 ~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~ 224 (236)
T cd03253 157 PILLLDEATSALDTHTEREIQAA-LRD-VSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA 224 (236)
T ss_pred CEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999888876 333 333789999999999998899999999999999998887754
No 342
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-36 Score=346.49 Aligned_cols=209 Identities=26% Similarity=0.380 Sum_probs=172.3
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.|+++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...+++++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceEE
Confidence 48999999999633 469999999999999999999999999999999999999999999999998752 12234699
Q ss_pred EEeCCCcC---CCccHHHhcCcCCC--------C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000503 1302 VVPQSPFL---FEGSLRDNLDPFHM--------N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1459)
Q Consensus 1302 ~VpQdp~l---f~gTIReNLdp~~~--------~---~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~ 1367 (1459)
|+||+|.+ +..++++|+..... . .++++.++++. +|++.........||||||||++
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~gl~~~~~~~~~~LSgG~~qrv~ 152 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALAR---------VDMVEFRHRQIGELSGGQKKRVF 152 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHH---------cCChhHhcCCcccCCHHHHHHHH
Confidence 99999865 45689999853210 0 01123333333 35544445555679999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
|||||+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+++++ +|++++.|+++++..
T Consensus 153 laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~~ 230 (272)
T PRK15056 153 LARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTFT 230 (272)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhccC
Confidence 9999999999999999999999999999999998764 47899999999998865 8999777 899999999999864
No 343
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=9.1e-37 Score=360.20 Aligned_cols=188 Identities=27% Similarity=0.367 Sum_probs=159.1
Q ss_pred cceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------------cEEEEcCCCCCCCC-
Q 000503 625 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILSG- 686 (1459)
Q Consensus 625 ~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------------~i~y~~Q~~~l~~~- 686 (1459)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++||+|++++|+.
T Consensus 7 ~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~ 86 (363)
T TIGR01186 7 KGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHM 86 (363)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCC
Confidence 359999999999999999999999999999999999999999999876 49999999999975
Q ss_pred CHHHHhccCCCC---CH-HHHH---HHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcC
Q 000503 687 TIRDNILFGKNY---DP-QSYS---ETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 759 (1459)
Q Consensus 687 ti~~nI~~g~~~---~~-~~~~---~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe 759 (1459)
||+|||.|+.++ +. ++.+ ++++..+|+.. .+....+|||||||||+|||||+.+|+|+||||
T Consensus 87 TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~-----------~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 87 TILQNTSLGPELLGWPEQERKEKALELLKLVGLEEY-----------EHRYPDELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchh-----------hhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 999999987432 22 2333 34444444332 445667999999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000503 760 VLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1459)
Q Consensus 760 ~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 823 (1459)
|||+||+.+.+++.+.+.......++|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999988754322234789999999999865 5999999999999999999998654
No 344
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.8e-36 Score=328.13 Aligned_cols=172 Identities=30% Similarity=0.502 Sum_probs=156.6
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh-HHHhccc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i 1300 (1459)
.++++|++++| +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +..|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 8999999999999999999999999999999999999999999999999988763 4568899
Q ss_pred EEEeCCC---cCC-CccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1301 AVVPQSP---FLF-EGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1301 ~~VpQdp---~lf-~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+|+||+| .++ ..|++||+.+... ||+|||||++||||++++|
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~----------------------------------LS~G~~qrl~la~al~~~p 123 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL----------------------------------LSGGNQQKVVLARWLARDP 123 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh----------------------------------cCHHHHHHHHHHHHHccCC
Confidence 9999995 344 5799999864310 9999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeE
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1433 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~I 1433 (1459)
++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 124 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 124 RVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999998764 47999999999999987 899999999975
No 345
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=4e-33 Score=336.78 Aligned_cols=450 Identities=16% Similarity=0.179 Sum_probs=314.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCh--h---HHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 000503 338 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSD--G---EIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALY 411 (1459)
Q Consensus 338 ~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~--g---~i~nlms~D~~~i~~~~-~~~~~~~~~p~~i~i~~~ 411 (1459)
...|...++..+.|..|...+.+|-|.-....+-.... + ..=..+..|+..+.+.. .....+..+.+.++.-..
T Consensus 105 ~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~ 184 (604)
T COG4178 105 AQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTG 184 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 45677788999999999999999999877543321111 1 12247778887776643 334444555555555555
Q ss_pred HHHHHhHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCch
Q 000503 412 LLYTQVKF---------------AFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWE 476 (1459)
Q Consensus 412 lL~~~lg~---------------a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e 476 (1459)
+||...|. .+.+.++-+++...+..+++|...+...+..+.-..--.....+..+...|-+|+.|
T Consensus 185 iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE 264 (604)
T COG4178 185 ILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGE 264 (604)
T ss_pred HHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCc
Confidence 66644431 122222222222233334444433333333333222234455788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHH
Q 000503 477 QIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW----ATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSF 552 (1459)
Q Consensus 477 ~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~----~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l 552 (1459)
+...+++++.-..=++..++..........+. .++. +++.+. ++=.+..++++-|.+.++-..|+.+...+.-+
T Consensus 265 ~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~-v~P~li-~ap~~f~g~i~~G~lmqa~~aF~~v~sslswf 342 (604)
T COG4178 265 KVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSV-VLPILI-AAPRYFSGQITFGGLMQAVGAFGQVHSSLSWF 342 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHH-HHHHHh-ccHhhhcCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 98888777654444443333222221111111 1111 111111 11124577899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCC---CchhhhhhcCCCCcccCCCccc-CCCCceEEEEcceEeccCCCcccccccee
Q 000503 553 PWVINGLIDAFISIRRLTRFLGCSE---YKHELEQAANSPSYISNGLSNF-NSKDMAVIMQDATCSWYCNNEEEQNVVLN 628 (1459)
Q Consensus 553 ~~~i~~~~~a~~s~~RI~~fL~~~e---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~sf~w~~~~~~~~~~~l~ 628 (1459)
...++.+.+=+++..|+.+|-..-+ .++.. +... ...... +..+..|.++|++..-+.. .+.++
T Consensus 343 i~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~------~~~~-~~~~~~~~~~~~~i~~~nl~l~~p~~-----~~ll~ 410 (604)
T COG4178 343 IDNYDAIADWRATLLRLAEFRQALEAAQMDTEK------PART-GRRIDFDDNADHGITLENLSLRTPDG-----QTLLS 410 (604)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhccCcccc------cCcc-cccccccccccceeEEeeeeEECCCC-----Ceeec
Confidence 9999999999999999999985322 11100 0000 000000 0115789999999987643 25699
Q ss_pred eceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEc-C-cEEEEcCCCCCCCCCHHHHhccCC---CCCHHHH
Q 000503 629 QVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHAS-G-SIAYVPQVPWILSGTIRDNILFGK---NYDPQSY 703 (1459)
Q Consensus 629 ~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~-~-~i~y~~Q~~~l~~~ti~~nI~~g~---~~~~~~~ 703 (1459)
+.||++++|+.+.|.|+||||||||+++|.|..|--+|+|... + .+-|+||.|.++.||.||-|++.. +++++.+
T Consensus 411 ~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l 490 (604)
T COG4178 411 ELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAEL 490 (604)
T ss_pred cceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHH
Confidence 9999999999999999999999999999999999999999887 3 489999999999999999999975 2788999
Q ss_pred HHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC
Q 000503 704 SETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML 783 (1459)
Q Consensus 704 ~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~ 783 (1459)
.+++..|+|.+-++++.+-++ =...||||||||||+||.++++|++++|||.|||||++++..+++. +.. .+.
T Consensus 491 ~~vL~~vgL~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~-l~~-~lp 563 (604)
T COG4178 491 VAVLHKVGLGDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQL-LKE-ELP 563 (604)
T ss_pred HHHHHHcCcHHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHH-HHh-hCC
Confidence 999999999988877654332 4468999999999999999999999999999999999999999887 444 467
Q ss_pred CceEEEEcCCcchhhcCCEEEEEeC
Q 000503 784 QKTRILCTHNVQAISAADMVVVMDK 808 (1459)
Q Consensus 784 ~~t~i~vth~~~~l~~~d~i~~l~~ 808 (1459)
+.|+|-|.|+.......++.+.+.+
T Consensus 564 ~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 564 DATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred CCEEEEeccchhhHHHHhhheeecc
Confidence 8899999999998887777666643
No 346
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=2.1e-36 Score=330.84 Aligned_cols=182 Identities=29% Similarity=0.437 Sum_probs=161.4
Q ss_pred cEEEEEEEEEecCC----CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccC--CCCCceEEECCEeCCCCChHH
Q 000503 1222 LIEFQNVTMRYKPS----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRD 1295 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~----~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~ 1295 (1459)
.|+++||+++|+.. ..++|+|+||+|++||+++|+|++|||||||+++|.|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 48999999999752 256999999999999999999999999999999999999 9999999999999875 36
Q ss_pred HhcccEEEeCCCcCCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1296 LRGRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1296 lR~~i~~VpQdp~lf~g-TIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
+|++++++||++.+|.+ |+++|+.... .. . .||+|||||++||||+++
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~~---------~----------~LS~G~~qrv~laral~~ 128 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------KL---------R----------GLSGGERKRVSIALELVS 128 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------Hh---------c----------cCCHHHHHHHHHHHHHHc
Confidence 78899999999998875 9999984210 00 0 699999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChh-hHhh-cCEEEEEeCCeEEEec
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIS-TVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~-ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
+|+++||||||++||..+.+.+.+.|++.. +++|+|+++|+++ .+.. ||+|++|++|++++.|
T Consensus 129 ~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 129 NPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 999999999999999999999999998864 4899999999997 4544 8999999999998765
No 347
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.9e-35 Score=381.36 Aligned_cols=226 Identities=24% Similarity=0.341 Sum_probs=156.3
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHh------ccC---CCCCce------------
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALF------RLT---PICGGQ------------ 1280 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~------rl~---~~~~G~------------ 1280 (1459)
.++++|++. ..|+|+|++|++||.+||+|.+|||||||+.-++ ++. .+..+.
T Consensus 614 ~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 686 (943)
T PRK00349 614 FLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKV 686 (943)
T ss_pred eEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCce
Confidence 477888752 2599999999999999999999999999998764 211 122233
Q ss_pred EEECCEeCCCCC----------hHHHhcccE---------EEeCCCcCCC-----------ccHHHhcCcCCC-------
Q 000503 1281 ILVDGLNIINTP----------VRDLRGRFA---------VVPQSPFLFE-----------GSLRDNLDPFHM------- 1323 (1459)
Q Consensus 1281 I~IDG~di~~i~----------~~~lR~~i~---------~VpQdp~lf~-----------gTIReNLdp~~~------- 1323 (1459)
|.||..++..-+ .+.+|.-++ +-++.-.+.+ |+++.|+.+...
T Consensus 687 v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 766 (943)
T PRK00349 687 IDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766 (943)
T ss_pred EEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCcc
Confidence 334443332111 123333332 2222211111 455555443211
Q ss_pred -----C------------ChH-----HHHHHHHHh----cH---HHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1324 -----N------------DDL-----KIWSVLEKC----HV---KEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1324 -----~------------~d~-----ei~~aL~~~----~l---~~~i~~lGLdt-~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
+ +-. .+.++++-. ++ .+.++.+||+. .++.....||||||||+.|||+|+
T Consensus 767 C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~ 846 (943)
T PRK00349 767 CKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELS 846 (943)
T ss_pred ccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHh
Confidence 0 101 122222221 11 22334458875 467777899999999999999999
Q ss_pred cCC---CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEE------eCCeEEEecChhHHh
Q 000503 1374 KSS---KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL------DHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1374 r~~---~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl------~~G~IvE~G~p~eLl 1443 (1459)
++| +++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++.
T Consensus 847 ~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~ 926 (943)
T PRK00349 847 KRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPEEVA 926 (943)
T ss_pred cCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHHHHH
Confidence 999 9999999999999999999999998764 588999999999999999999999 799999999999999
Q ss_pred ccCCcHHHHHH
Q 000503 1444 QDECSVFSSFV 1454 (1459)
Q Consensus 1444 ~~~~~~f~~l~ 1454 (1459)
+++.+.=.+.+
T Consensus 927 ~~~~s~t~~~l 937 (943)
T PRK00349 927 KVEASYTGRYL 937 (943)
T ss_pred hCcccHHHHHH
Confidence 88766444443
No 348
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=2.5e-36 Score=326.44 Aligned_cols=177 Identities=33% Similarity=0.525 Sum_probs=158.7
Q ss_pred EEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000503 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1459)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1459)
+++||+++|+. .++|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 47899999964 4699999999999999999999999999999999999999999999999999988888888899999
Q ss_pred eCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000503 1304 PQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1383 (1459)
Q Consensus 1304 pQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDE 1383 (1459)
|| +++.+++. ..+...+.+||+|||||++||||++++|+++||||
T Consensus 79 ~q--------------------------~l~~~gl~---------~~~~~~~~~LS~G~~qrl~laral~~~p~llllDE 123 (180)
T cd03214 79 PQ--------------------------ALELLGLA---------HLADRPFNELSGGERQRVLLARALAQEPPILLLDE 123 (180)
T ss_pred HH--------------------------HHHHcCCH---------hHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99 44444443 33445566899999999999999999999999999
Q ss_pred cCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1384 CTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1384 aTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
||++||.++.+.+.+.|++..+ ++|+|++||+++.+.+ ||++++|++|++++.|
T Consensus 124 P~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 124 PTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999987654 7899999999999855 8999999999998764
No 349
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=4.6e-36 Score=341.14 Aligned_cols=210 Identities=24% Similarity=0.383 Sum_probs=177.4
Q ss_pred EEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000503 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1459)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1459)
+++||+++ .+|+|+||+|++||++||+|+||||||||+++|.|++++ +|+|.+||.++...+...+|+.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~-~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPG-SGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC-CeEEEECCEecCcCCHHHHhhheEEe
Confidence 56778774 279999999999999999999999999999999999864 99999999999988888888899999
Q ss_pred eCCCcC-CCccHHHhcCcCCCC--ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc------
Q 000503 1304 PQSPFL-FEGSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK------ 1374 (1459)
Q Consensus 1304 pQdp~l-f~gTIReNLdp~~~~--~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr------ 1374 (1459)
||+|.+ +..|+++|+...... +.++. .....+.++.+|++.........||+|||||++||||+++
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~~~ 149 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAV-----ASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPDIN 149 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHH-----HHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccccC
Confidence 999854 567999999764321 11111 1123345555577666666777899999999999999997
Q ss_pred -CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1375 -SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1375 -~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+|++|||||||++||+++.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 150 p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 223 (248)
T PRK03695 150 PAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLTP 223 (248)
T ss_pred CCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhCc
Confidence 679999999999999999999999998764 47899999999998765 899999999999999999998753
No 350
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-36 Score=357.09 Aligned_cols=202 Identities=28% Similarity=0.422 Sum_probs=169.7
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------c
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 673 (1459)
.++++|+++.|+.+ ..+|+|+||++++|++++|+|||||||||||++|+|+.+|++|+|.++| .
T Consensus 3 ~l~i~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ 77 (356)
T PRK11650 3 GLKLQAVRKSYDGK-----TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRD 77 (356)
T ss_pred EEEEEeEEEEeCCC-----CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 37889999998421 2359999999999999999999999999999999999999999999987 4
Q ss_pred EEEEcCCCCCCC-CCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 674 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 674 i~y~~Q~~~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
||||+|++.+|. .||+|||.|+.. .+. ++.+++++..+|+.... ....+|||||||||+||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~QRvalA 146 (356)
T PRK11650 78 IAMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLD-----------RKPRELSGGQRQRVAMG 146 (356)
T ss_pred EEEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhh-----------CChhhCCHHHHHHHHHH
Confidence 999999999995 599999998743 222 34556666667654433 34458999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 823 (1459)
|||+.+|+++|||||||+||+.+.+.+.+.+ .... ..+.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 147 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 147 RAIVREPAVFLFDEPLSNLDAKLRVQMRLEI-QRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999999999999999999888763 3212 23789999999998765 5999999999999999999998643
No 351
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=330.01 Aligned_cols=181 Identities=24% Similarity=0.382 Sum_probs=160.1
Q ss_pred cEEEEEEEEEecCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccC--CCCCceEEECCEeCCCCChHHHh
Q 000503 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDLR 1297 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~lR 1297 (1459)
.|+++|++++|++. .+++|+|+||+|++||+++|+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999642 246999999999999999999999999999999999986 489999999999986 5678
Q ss_pred cccEEEeCCCcCCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1298 GRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1298 ~~i~~VpQdp~lf~g-TIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
++++++||+|.+|.+ |+++|+.... .++ +||||||||++||||++++|
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~---------~~~----------------------~LSgGe~qrv~la~al~~~p 127 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFSA---------LLR----------------------GLSVEQRKRLTIGVELAAKP 127 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHHH---------HHh----------------------cCCHHHhHHHHHHHHHhcCC
Confidence 899999999988875 9999986310 000 69999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-H-hhcCEEEEEeC-CeEEEec
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDH-GHLVEQG 1437 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~t-i-~~~DrIlVl~~-G~IvE~G 1437 (1459)
++|+|||||++||.++.+.+.+.|++.. +++|+|+|||+++. + ..||+|++|++ |++++.|
T Consensus 128 ~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 128 SILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred cEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 9999999999999999999999998764 47999999999984 4 56899999999 9999876
No 352
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=6.4e-36 Score=341.71 Aligned_cols=217 Identities=22% Similarity=0.325 Sum_probs=178.0
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcc--CCCCCceEEECCEeCCCCChHHHhc-
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL--TPICGGQILVDGLNIINTPVRDLRG- 1298 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl--~~~~~G~I~IDG~di~~i~~~~lR~- 1298 (1459)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++...+.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4899999999963 3599999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ccEEEeCCCcCCCc-cHHHhcCcCCC----C---ChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCC-CCChhHHHHHHH
Q 000503 1299 RFAVVPQSPFLFEG-SLRDNLDPFHM----N---DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGI-SFSVGQRQLICL 1368 (1459)
Q Consensus 1299 ~i~~VpQdp~lf~g-TIReNLdp~~~----~---~d~ei~~aL~~~~l~~~i~~lGLd-t~v~e~G~-~LSgGQrQrl~L 1368 (1459)
.++++||+|.+|++ |+++|+..... . .+.+..+.. ....+.++.+|+. ...+.... .||||||||++|
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~l 162 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFL--EIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNEI 162 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHH--HHHHHHHHHcCCchhhhccccccCCCHHHHHHHHH
Confidence 58999999999987 78999753211 0 010001111 1123334444665 34455444 599999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh--cCEEEEEeCCeEEEecChhHH
Q 000503 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN--MDEILILDHGHLVEQGNPQTL 1442 (1459)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~--~DrIlVl~~G~IvE~G~p~eL 1442 (1459)
|||++++|+|+||||||++||.++.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+|+++
T Consensus 163 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 239 (252)
T CHL00131 163 LQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAELA 239 (252)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChhhh
Confidence 999999999999999999999999999999998764 47999999999999875 799999999999999999844
No 353
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=7.4e-36 Score=334.10 Aligned_cols=205 Identities=34% Similarity=0.467 Sum_probs=180.5
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|.++.|... . .++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~-~---~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~ 77 (220)
T cd03245 2 RIEFRNVSFSYPNQ-E---IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLR 77 (220)
T ss_pred eEEEEEEEEEcCCC-C---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHH
Confidence 36789999998532 1 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHcc
Q 000503 673 -SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 750 (1459)
.++|++|+|+++..|++||+.++.. .++++..+.++.+++.+.++..|.|.+|.+.....+||||||||++||||+..
T Consensus 78 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~ 157 (220)
T cd03245 78 RNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLN 157 (220)
T ss_pred hhEEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhc
Confidence 4899999999998999999988643 34556778888889988889999999999998999999999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEec
Q 000503 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 751 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g 815 (1459)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 158 ~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 158 DPPILLLDEPTSAMDMNSEERLKER-LRQ-LLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999988876 333 33347999999999988789999999999997653
No 354
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.2e-36 Score=334.94 Aligned_cols=197 Identities=27% Similarity=0.371 Sum_probs=163.6
Q ss_pred EEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh----HHHhccc
Q 000503 1225 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV----RDLRGRF 1300 (1459)
Q Consensus 1225 f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~----~~lR~~i 1300 (1459)
++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4789999964 369999999999999999999999999999999999999999999999999875542 2467889
Q ss_pred EEEeCCCcCCC-ccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1301 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1301 ~~VpQdp~lf~-gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+|++|+|.+|+ .|++||+.+... ...++.. ....+.++.+|++...+....+||+|||||++|||||+++|
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~lS~G~~qr~~laral~~~p 153 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKR-----EKKKEALEKVGLNLKLKQKIYELSGGEQQRVALARAILKDP 153 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCchhhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 99999999997 599999975211 1111111 11233444446655556666789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEE
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL 1428 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl 1428 (1459)
++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+..||+|++|
T Consensus 154 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 154 PLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred CEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999998764 478999999999988889999875
No 355
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=4.8e-36 Score=319.44 Aligned_cols=164 Identities=33% Similarity=0.449 Sum_probs=150.5
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+.+ +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999643 46999999999999999999999999999999999999999999999873 68999
Q ss_pred EeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000503 1303 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1459)
Q Consensus 1303 VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1459)
+||+|.++++|++||+... ....||+|||||++||||++++|++++||
T Consensus 69 ~~q~~~~~~~tv~~nl~~~--------------------------------~~~~LS~G~~~rv~laral~~~p~~lllD 116 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP--------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLD 116 (166)
T ss_pred ECCCCccccccHHHHhhcc--------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 9999999999999999642 23479999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCe
Q 000503 1383 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGH 1432 (1459)
Q Consensus 1383 EaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G~ 1432 (1459)
|||++||.++.+.+.+.|++. ++|+|++||+++....||+|++|++|-
T Consensus 117 EPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 117 EATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred CCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 999999999999999999876 689999999999888899999998763
No 356
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=5.2e-36 Score=337.29 Aligned_cols=207 Identities=25% Similarity=0.366 Sum_probs=168.7
Q ss_pred cceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC----CCceEEECCEeCCCCChHHHhcccEEEeCCCc-CC-C-
Q 000503 1239 ALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI----CGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-LF-E- 1311 (1459)
Q Consensus 1239 vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~----~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~-lf-~- 1311 (1459)
+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..+++++|+||+|. .| +
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 57999999999999999999999999999999999999 899999999998754 233468999999995 34 3
Q ss_pred ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCc---hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccC
Q 000503 1312 GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1385 (1459)
Q Consensus 1312 gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLd---t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaT 1385 (1459)
-|+++|+.... ....++. +....+.++.+|++ ...+.....||||||||++||||++++|+||||||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt 153 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQA-----RALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPT 153 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHH-----HHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 48888874210 0111110 11123344444665 4566677789999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHH
Q 000503 1386 ANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSS 1452 (1459)
Q Consensus 1386 S~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~ 1452 (1459)
++||.++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++...+...|.+
T Consensus 154 ~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 154 TDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred cccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 99999999999999987653 7899999999999975 8999999999999999999998766555554
No 357
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.1e-36 Score=353.98 Aligned_cols=203 Identities=28% Similarity=0.355 Sum_probs=168.1
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|+++.|+.... ..++|+|+||++++||+++|+||||||||||+++|.|+.+|++|+|.++|
T Consensus 2 I~~~~lsk~y~~~~~--~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~ 79 (343)
T TIGR02314 2 IKLSNITKVFHQGTK--TIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTK 79 (343)
T ss_pred EEEEEEEEEECCCCc--ceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHH
Confidence 678999999863211 12469999999999999999999999999999999999999999999875
Q ss_pred ---cEEEEcCCCCCCC-CCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
.|+|++|++.++. .|++|||.++.. .+. ++..++++..+|.+.. ......||||||||
T Consensus 80 ~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~-----------~~~~~~LSgGqkQR 148 (343)
T TIGR02314 80 ARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKH-----------DSYPSNLSGGQKQR 148 (343)
T ss_pred HhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHH
Confidence 4899999999985 699999987532 222 2334455555554322 34556999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1459)
|+|||||..+|+++|||||||+||+.+.+.+++. +.... ..+.|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 V~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~l-L~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~ 227 (343)
T TIGR02314 149 VAIARALASNPKVLLCDEATSALDPATTQSILEL-LKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSE 227 (343)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999998876 33211 237899999999999865 99999999999999999999
Q ss_pred HHh
Q 000503 820 LAV 822 (1459)
Q Consensus 820 l~~ 822 (1459)
+..
T Consensus 228 v~~ 230 (343)
T TIGR02314 228 IFS 230 (343)
T ss_pred HHc
Confidence 864
No 358
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-36 Score=350.30 Aligned_cols=209 Identities=27% Similarity=0.427 Sum_probs=171.0
Q ss_pred CCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC---------
Q 000503 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 672 (1459)
Q Consensus 602 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------- 672 (1459)
.+..++++|++|.|+.... ...++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 18 ~~~~l~~~nl~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~ 96 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQE-NELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNN 96 (320)
T ss_pred CCceEEEEeEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccc
Confidence 3457899999999964211 113469999999999999999999999999999999999999999998763
Q ss_pred --------------------cEEEEcCCC--CCCCCCHHHHhccCCC---CCHH----HHHHHHHHhcchhhHhhccCCC
Q 000503 673 --------------------SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGD 723 (1459)
Q Consensus 673 --------------------~i~y~~Q~~--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd 723 (1459)
.|+||+|+| ++++.||+|||.|+.. .+++ +..+.++.+++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~--------- 167 (320)
T PRK13631 97 HELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD--------- 167 (320)
T ss_pred ccccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh---------
Confidence 279999998 7899999999998742 2222 2233344444321
Q ss_pred cccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCE
Q 000503 724 MAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADM 802 (1459)
Q Consensus 724 ~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~ 802 (1459)
...+..+.+||||||||++|||||..+|+++||||||++||+.+.+.+++. +.....+++|+|++||+++.+. .||+
T Consensus 168 -~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~-L~~l~~~g~TiiivtHd~~~~~~~adr 245 (320)
T PRK13631 168 -SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQL-ILDAKANNKTVFVITHTMEHVLEVADE 245 (320)
T ss_pred -hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCE
Confidence 224567789999999999999999999999999999999999999988876 3332235789999999999875 5999
Q ss_pred EEEEeCCeEEEecCHHHHHh
Q 000503 803 VVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 803 i~~l~~G~i~~~g~~~~l~~ 822 (1459)
|++|++|++++.|+++++..
T Consensus 246 i~vl~~G~i~~~g~~~~~~~ 265 (320)
T PRK13631 246 VIVMDKGKILKTGTPYEIFT 265 (320)
T ss_pred EEEEECCEEEEeCCHHHHhc
Confidence 99999999999999998754
No 359
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-36 Score=322.57 Aligned_cols=221 Identities=25% Similarity=0.428 Sum_probs=189.8
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1301 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1301 (1459)
++.+|++.+|.. -.+++||||++++||.+|++|||||||||+++++.|+|+|++|+|.++|.||..++++.. |..|+
T Consensus 5 L~v~~l~k~FGG--l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFGG--LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecCC--EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 578999999964 359999999999999999999999999999999999999999999999999999998875 44588
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCCC------------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHMN------------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1368 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~~------------~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~L 1368 (1459)
--+|.+-+|++ |+-||+...... ...+-.++.+++ .+.++.+||+..-++...+||+||++||-|
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A--~~~Le~vgL~~~a~~~A~~LsyG~qR~LEI 160 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERA--RELLEFVGLGELADRPAGNLSYGQQRRLEI 160 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHH--HHHHHHcCCchhhcchhhcCChhHhHHHHH
Confidence 88999999987 999998543110 000112222222 344555689888888888999999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
||||..+|++|+||||.++|.++-...+.+.|++..+ +.|+++|-|+++.+++ ||||+||+.|+++.+|+|+|..++
T Consensus 161 ArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~d 240 (250)
T COG0411 161 ARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRNN 240 (250)
T ss_pred HHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHhcC
Confidence 9999999999999999999999988899999988764 4899999999999988 899999999999999999999987
Q ss_pred CC
Q 000503 1446 EC 1447 (1459)
Q Consensus 1446 ~~ 1447 (1459)
+.
T Consensus 241 p~ 242 (250)
T COG0411 241 PR 242 (250)
T ss_pred HH
Confidence 64
No 360
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.7e-36 Score=300.96 Aligned_cols=197 Identities=25% Similarity=0.420 Sum_probs=170.3
Q ss_pred EecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCC
Q 000503 1231 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1310 (1459)
Q Consensus 1231 ~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf 1310 (1459)
.|.....++|+|+||++++||.++|.||||||||||++.+.-+.+|++|.++..|.|+++.+++.+|++++|+-|.|.||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 46556668999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHhcC-cCC---CCChH-HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccC
Q 000503 1311 EGSLRDNLD-PFH---MNDDL-KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1385 (1459)
Q Consensus 1311 ~gTIReNLd-p~~---~~~d~-ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaT 1385 (1459)
.+||.+||- |+. ...|. ...+-|+++++. ++.+..+..+||||||||++|+|-|---|+||+|||+|
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~--------~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~T 161 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRAAALDLLARFALP--------DSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEIT 161 (223)
T ss_pred ccchhhccccchHHhccCCChHHHHHHHHHcCCc--------hhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCch
Confidence 999999985 332 22232 222333333332 23455666789999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhh-HhhcCEEEEEeCCeEEE
Q 000503 1386 ANVDAQTASILQNAISSEC--KGMTVITIAHRIST-VLNMDEILILDHGHLVE 1435 (1459)
Q Consensus 1386 S~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~t-i~~~DrIlVl~~G~IvE 1435 (1459)
|+||..+.+.|.+.|..++ ++..++.|||+-+. ++.+||++-+..|++-|
T Consensus 162 sALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~ 214 (223)
T COG4619 162 SALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGE 214 (223)
T ss_pred hhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcccc
Confidence 9999999999999999887 47899999999998 88899999999998744
No 361
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=9.8e-36 Score=339.43 Aligned_cols=215 Identities=18% Similarity=0.289 Sum_probs=171.1
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccC--CCCCceEEECCEeCCCCChHHHh-cc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDLR-GR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~lR-~~ 1299 (1459)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999964 35999999999999999999999999999999999995 69999999999999887776654 57
Q ss_pred cEEEeCCCcCCCc-cHHHhcCcC-C---CCChHHHHHHHHHhc----HHHHHHhCCCch-hhhcCCC-CCChhHHHHHHH
Q 000503 1300 FAVVPQSPFLFEG-SLRDNLDPF-H---MNDDLKIWSVLEKCH----VKEEVEAVGLET-FVKESGI-SFSVGQRQLICL 1368 (1459)
Q Consensus 1300 i~~VpQdp~lf~g-TIReNLdp~-~---~~~d~ei~~aL~~~~----l~~~i~~lGLdt-~v~e~G~-~LSgGQrQrl~L 1368 (1459)
++++||+|.+++. |..+|+... . .....+ .++..+ +.+.++.+|++. ....... .||||||||++|
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~l 156 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQE---PLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDI 156 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccc---cchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHH
Confidence 9999999987765 544443211 0 000100 111111 223344446632 2222232 699999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhHhh--cCEEEEEeCCeEEEecChhHH
Q 000503 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVLN--MDEILILDHGHLVEQGNPQTL 1442 (1459)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~-~~TvI~IaHrl~ti~~--~DrIlVl~~G~IvE~G~p~eL 1442 (1459)
|||++++|+||||||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.. +|+|++|++|++++.|++++.
T Consensus 157 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 233 (248)
T PRK09580 157 LQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLV 233 (248)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999987643 7899999999999987 799999999999999999855
No 362
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.4e-35 Score=353.67 Aligned_cols=228 Identities=27% Similarity=0.454 Sum_probs=184.4
Q ss_pred cEEEEEEEEEecCCCC--ccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCC----CceEEECCEeCCCCChHH
Q 000503 1222 LIEFQNVTMRYKPSLP--AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC----GGQILVDGLNIINTPVRD 1295 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~--~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~----~G~I~IDG~di~~i~~~~ 1295 (1459)
-++++|++..|..... .+++||||+|.+||.+||||+|||||||+.++|+|+.++. +|+|.+||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975533 4899999999999999999999999999999999999987 899999999999988766
Q ss_pred Hh----cccEEEeCCCc-CCCc--cHHHhcC----cCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhc--CCCCCChhH
Q 000503 1296 LR----GRFAVVPQSPF-LFEG--SLRDNLD----PFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKE--SGISFSVGQ 1362 (1459)
Q Consensus 1296 lR----~~i~~VpQdp~-lf~g--TIReNLd----p~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e--~G~~LSgGQ 1362 (1459)
.| ++|++|||||+ .++- ||.+-+. .....+.+| .+....+.++..|+...... -...|||||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~e-----a~~~a~elL~~Vgl~~~~~~~~yPheLSGG~ 159 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAE-----ARKRAVELLEQVGLPDPERRDRYPHQLSGGM 159 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHH-----HHHHHHHHHHHcCCCChhhhccCCcccCchH
Confidence 54 57999999996 3432 4444332 111111111 01111223333366554443 567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecCh
Q 000503 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1439 (1459)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1439 (1459)
|||+.||+||..+|++||+||||.+||+.|.+.|.+.|++.. .+.++|+|||++..+.. ||||+||.+|+++|.|++
T Consensus 160 rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~ 239 (539)
T COG1123 160 RQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPT 239 (539)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCH
Confidence 999999999999999999999999999999999999998865 58999999999999987 899999999999999999
Q ss_pred hHHhccCCcHHHHHH
Q 000503 1440 QTLLQDECSVFSSFV 1454 (1459)
Q Consensus 1440 ~eLl~~~~~~f~~l~ 1454 (1459)
+++++++...|.+..
T Consensus 240 ~~i~~~p~hpYT~~L 254 (539)
T COG1123 240 EEILSNPQHPYTRGL 254 (539)
T ss_pred HHHHhccCCcccHHH
Confidence 999998876665543
No 363
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=4.7e-36 Score=337.31 Aligned_cols=194 Identities=27% Similarity=0.364 Sum_probs=163.5
Q ss_pred ceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcCCC-ccHHHhc
Q 000503 1240 LHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFE-GSLRDNL 1318 (1459)
Q Consensus 1240 L~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~-gTIReNL 1318 (1459)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|+ .|++||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 579999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CcC-----CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHH
Q 000503 1319 DPF-----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTA 1393 (1459)
Q Consensus 1319 dp~-----~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te 1393 (1459)
... ...++++..+ .+.+.++.+|++.........||||||||++|||||+++|++|||||||++||+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRA-----IVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHHhcccCCCHHHHHH-----HHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 642 1122222111 123344555666656666678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1394 SILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1394 ~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++.+++
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999998764 37899999999999876 8999999999999999887763
No 364
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.1e-35 Score=332.10 Aligned_cols=199 Identities=39% Similarity=0.692 Sum_probs=175.4
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1459)
.+.|+.|.|+.. .++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~~-----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (218)
T cd03290 2 QVTNGYFSWGSG-----LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSR 76 (218)
T ss_pred eeeeeEEecCCC-----CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchh
Confidence 456888988643 2359999999999999999999999999999999999999999998854
Q ss_pred ---cEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHc
Q 000503 673 ---SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 749 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly 749 (1459)
.++|++|+|.+++.|++||+.++.+++.++.+++++++++...++..|.|+++.++....+||||||||++||||++
T Consensus 77 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~ 156 (218)
T cd03290 77 NRYSVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALY 156 (218)
T ss_pred hcceEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHh
Confidence 38999999999999999999987766666778899999998888889999999999999999999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHH-hhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCe
Q 000503 750 HGSDIYMLDDVLSAVDAQVARWILSN-AIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1459)
Q Consensus 750 ~~~~illlDe~~s~lD~~~~~~i~~~-~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~ 810 (1459)
.+|+++||||||++||+.+.+.+.+. ++.....++.|+|++||+.+.++.||++++|++|.
T Consensus 157 ~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 157 QNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred hCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887762 22221234689999999999998899999999884
No 365
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=351.71 Aligned_cols=201 Identities=28% Similarity=0.417 Sum_probs=168.2
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------c
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 673 (1459)
.++++|+++.|.. ..+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++| .
T Consensus 6 ~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ 79 (351)
T PRK11432 6 FVVLKNITKRFGS------NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRD 79 (351)
T ss_pred EEEEEeEEEEECC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 5889999999952 2359999999999999999999999999999999999999999999976 5
Q ss_pred EEEEcCCCCCCCC-CHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 674 IAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 674 i~y~~Q~~~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
||||+|++.+|.. ||+|||.|+.. .++ ++.+++++..++... ......+|||||||||+||
T Consensus 80 ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~-----------~~r~~~~LSgGq~QRVaLA 148 (351)
T PRK11432 80 ICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGF-----------EDRYVDQISGGQQQRVALA 148 (351)
T ss_pred EEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHH
Confidence 8999999999865 99999998743 222 233445555555322 2345568999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 823 (1459)
|||+.+|+++|||||||+||+.+.+.+.+. +.... ..+.|+|+|||+.+.+. .||+|++|++|++.+.|+++++...
T Consensus 149 RaL~~~P~lLLLDEP~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 149 RALILKPKVLLFDEPLSNLDANLRRSMREK-IRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999988776 33311 23789999999999875 5999999999999999999998643
No 366
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=8.1e-36 Score=336.73 Aligned_cols=195 Identities=29% Similarity=0.381 Sum_probs=160.8
Q ss_pred CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEe-CCCcCCC-ccH
Q 000503 1237 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP-QSPFLFE-GSL 1314 (1459)
Q Consensus 1237 ~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~Vp-Qdp~lf~-gTI 1314 (1459)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|+| |++.+|. .|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 4699999999999999999999999999999999999999999999999987653 346788999997 6677764 599
Q ss_pred HHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHH
Q 000503 1315 RDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQ 1391 (1459)
Q Consensus 1315 ReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~ 1391 (1459)
+||+.... ...+++..+. ..+.++.+|++.........||||||||++|||||+.+|++|||||||++||++
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~ 187 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKR-----LDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVV 187 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHH
Confidence 99985432 1222222211 122333446655455555679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1392 TASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1392 te~~I~~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 188 ~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 188 AQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999988643 7899999999999876 8999999999998765
No 367
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-36 Score=324.85 Aligned_cols=220 Identities=27% Similarity=0.388 Sum_probs=185.7
Q ss_pred cEEEEEEEEEecCCC----------------------CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCc
Q 000503 1222 LIEFQNVTMRYKPSL----------------------PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1279 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~----------------------~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G 1279 (1459)
.|+++||+.-+..+. ..-++|+||+|+.||+.-|.|=||||||||+.++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 588889988775431 1237899999999999999999999999999999999999999
Q ss_pred eEEECCEeCCCCChHHHh----cccEEEeCCCcCCCc-cHHHhcCcCCCC---Ch----HHHHHHHHHhcHHHHHHhCCC
Q 000503 1280 QILVDGLNIINTPVRDLR----GRFAVVPQSPFLFEG-SLRDNLDPFHMN---DD----LKIWSVLEKCHVKEEVEAVGL 1347 (1459)
Q Consensus 1280 ~I~IDG~di~~i~~~~lR----~~i~~VpQdp~lf~g-TIReNLdp~~~~---~d----~ei~~aL~~~~l~~~i~~lGL 1347 (1459)
+|++||.|+..++.++|| +++++|+|.--||+- ||-+|..++-+. +. +...++|+.+ ||
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~V---------gL 154 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELV---------GL 154 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHc---------Cc
Confidence 999999999999988775 579999999999986 999999876432 22 2233444444 44
Q ss_pred chhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCE
Q 000503 1348 ETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDE 1424 (1459)
Q Consensus 1348 dt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~Dr 1424 (1459)
+..-..-...||||+|||+.|||||..+|+||++|||.|+||+--...+|+-+.+.- -++||++|||+|++... -||
T Consensus 155 ~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~r 234 (386)
T COG4175 155 EGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDR 234 (386)
T ss_pred hhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccce
Confidence 444455566899999999999999999999999999999999999999998876542 37999999999998765 799
Q ss_pred EEEEeCCeEEEecChhHHhccCCcHH
Q 000503 1425 ILILDHGHLVEQGNPQTLLQDECSVF 1450 (1459)
Q Consensus 1425 IlVl~~G~IvE~G~p~eLl~~~~~~f 1450 (1459)
|..|++|+|+..|+|+|++.+|.--|
T Consensus 235 IaimkdG~ivQ~Gtp~eIl~~PAndY 260 (386)
T COG4175 235 IAIMKDGEIVQVGTPEEILLNPANDY 260 (386)
T ss_pred EEEecCCeEEEeCCHHHHHcCccHHH
Confidence 99999999999999999999886433
No 368
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-35 Score=336.20 Aligned_cols=198 Identities=28% Similarity=0.367 Sum_probs=163.4
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1459)
+++|+++.|.. .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 75 (235)
T cd03261 2 ELRGLTKSFGG------RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRL 75 (235)
T ss_pred eEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHH
Confidence 57888888852 2359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCCC-CHHHHhccCCC----CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 --SIAYVPQVPWILSG-TIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 --~i~y~~Q~~~l~~~-ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
.++|++|++.+++. |++||+.++.. .++ ++..++++.+++.... .....+||||||||
T Consensus 76 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qr 144 (235)
T cd03261 76 RRRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-----------DLYPAELSGGMKKR 144 (235)
T ss_pred hcceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHH
Confidence 38999999998876 99999987532 222 2334455555553322 33456899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1459)
|+||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 v~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 223 (235)
T cd03261 145 VALARALALDPELLLYDEPTAGLDPIASGVIDDL-IRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEE 223 (235)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHH
Confidence 9999999999999999999999999999988876 333122 37899999999998775 99999999999999999888
Q ss_pred HHh
Q 000503 820 LAV 822 (1459)
Q Consensus 820 l~~ 822 (1459)
+..
T Consensus 224 ~~~ 226 (235)
T cd03261 224 LRA 226 (235)
T ss_pred HcC
Confidence 753
No 369
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-33 Score=307.89 Aligned_cols=507 Identities=16% Similarity=0.147 Sum_probs=334.8
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000503 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDG-YVLAIALGLTSILKSFFDTQYSFHLSKLK 347 (1459)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g-~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 347 (1459)
+...++|.++|+++....+.++....+. .++-.+-+++.+......+ ..+.+++.+..++.+.. ......-+|
T Consensus 3 ~ll~llr~nr~~~i~~~a~s~a~g~~g~---~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~i---s~lg~t~~g 76 (546)
T COG4615 3 LLLLLLRQNRWPFISVMALSLASGALGI---GLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLI---SQLGLTTLG 76 (546)
T ss_pred hHHHHhcccccHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 3457888999998887776665544333 2332222333221111111 11222322222222221 222233344
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000503 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 427 (1459)
Q Consensus 348 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~v 427 (1459)
..+-..+...+-+|.+.-|....++.+++.++.-.+.|+..|...+..+.++.-+.+-+..+...|++.-+..++..++.
T Consensus 77 q~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~ 156 (546)
T COG4615 77 QHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVW 156 (546)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 44455555666688888888777777889999999999999997777777766555555555666666666677777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000503 428 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWE--QIFSSWLMKTRSSEVKHLSTRKYLDAWC- 504 (1459)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e--~~~~~~i~~~R~~El~~~~~~~~~~~~~- 504 (1459)
+++.+..+++...+..++.....+.-|+-.+..+.++.|-|.+|...-- ..+.+.+... .+|.+. +..+...+.
T Consensus 157 ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~-a~~~r~--~~~~~n~f~~ 233 (546)
T COG4615 157 IVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPD-AQEYRH--HIIRANTFHL 233 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcc-hHHHHh--hhhhhhHHHH
Confidence 7777778888888888888888999999999999999999999987632 1111111110 111111 111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC-CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCch-hh
Q 000503 505 VFFWATTPTLFSLFTFGLFALMGHQL-DAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH-EL 582 (1459)
Q Consensus 505 ~~~~~~~~~~~~~~~f~~~~~~~~~L-t~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~-~~ 582 (1459)
....+....+..++....|+...-.. +...+.|....+-.++.|+.++...+|.+..|.++++||.++=..|+..+ ..
T Consensus 234 la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~ 313 (546)
T COG4615 234 LAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFPR 313 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCC
Confidence 11112222333344443344322212 22244454555667889999999999999999999999998765443322 11
Q ss_pred hhhcCCCCcccCCCcccCCCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc
Q 000503 583 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 662 (1459)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~ 662 (1459)
.+ .. ++-..++++|+.|+|... .+-+..||++|++||++.|+|.||||||||++++.|.++
T Consensus 314 ~q--~~------------p~~~~lelrnvrfay~~~-----~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~ 374 (546)
T COG4615 314 PQ--AF------------PDWKTLELRNVRFAYQDN-----AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQ 374 (546)
T ss_pred CC--cC------------CcccceeeeeeeeccCcc-----cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccC
Confidence 11 00 123568999999999753 244889999999999999999999999999999999999
Q ss_pred CCCeEEEEcCc-------------EEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCccccc
Q 000503 663 LTHGSIHASGS-------------IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIG 728 (1459)
Q Consensus 663 ~~~G~i~~~~~-------------i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig 728 (1459)
|++|+|.++|. ++-|.-|-|||+.+ ..++. -+++..++-++.-.+.... .+.+|.-+
T Consensus 375 PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~l-----l~~e~~as~q~i~~~LqrLel~~kt-sl~d~~fs--- 445 (546)
T COG4615 375 PQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQL-----LGPEGKASPQLIEKWLQRLELAHKT-SLNDGRFS--- 445 (546)
T ss_pred CCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhh-----hCCccCCChHHHHHHHHHHHHhhhh-cccCCccc---
Confidence 99999999983 23334444554432 22332 3455555555555444332 22233222
Q ss_pred CCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeC
Q 000503 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 808 (1459)
Q Consensus 729 ~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~ 808 (1459)
...||-|||.|+|+--|+.-+.||++|||=-+-=||+-.++.++..+-.....|||++.|||+-.+...|||++.|++
T Consensus 446 --~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~ 523 (546)
T COG4615 446 --NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRN 523 (546)
T ss_pred --ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhc
Confidence 247999999999999999999999999999999999998887776443224569999999999999999999999999
Q ss_pred CeEEEe
Q 000503 809 GQVKWI 814 (1459)
Q Consensus 809 G~i~~~ 814 (1459)
|++++.
T Consensus 524 G~~~e~ 529 (546)
T COG4615 524 GQLSEL 529 (546)
T ss_pred Cceeec
Confidence 999863
No 370
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.9e-35 Score=367.45 Aligned_cols=215 Identities=24% Similarity=0.389 Sum_probs=183.9
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHh-ccc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLR-GRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR-~~i 1300 (1459)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+....+ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999964 4699999999999999999999999999999999999999999999999999887776655 469
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1459)
+|+||++.+|++ |++||+.+.....+ +.. ..+.+.++.+|++.........||||||||++|||||+++|+||
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~-~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~ll 162 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQ-ASM-----QKMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDSRIL 162 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccch-HHH-----HHHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999998876 99999976432111 111 11233444556665555566689999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1380 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1380 lLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 163 ILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 9999999999999999999998763 47899999999999876 89999999999999999998865
No 371
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=369.93 Aligned_cols=216 Identities=25% Similarity=0.397 Sum_probs=183.1
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC--CCceEEECCEeCCCCChHH-Hhc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRD-LRG 1298 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~--~~G~I~IDG~di~~i~~~~-lR~ 1298 (1459)
-|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+... .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 4899999999963 3699999999999999999999999999999999999996 8999999999998777654 467
Q ss_pred ccEEEeCCCcCCCc-cHHHhcCcCCC------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1299 RFAVVPQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1299 ~i~~VpQdp~lf~g-TIReNLdp~~~------~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
+++||||+|.+|+. |++||+.+... .+.++..+ .+.+.++.+|++.........||||||||++||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 157 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKA 157 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHH
Confidence 89999999988875 99999975421 11111111 23345555677655555666899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
|+.+|+||||||||++||+++...+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 232 (506)
T PRK13549 158 LNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTE 232 (506)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCH
Confidence 999999999999999999999999999998763 47899999999999876 89999999999999999988743
No 372
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.2e-35 Score=350.97 Aligned_cols=202 Identities=26% Similarity=0.381 Sum_probs=169.9
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|+++.|.. ..+|+|+||++++|++++|+|||||||||||++|+|+.+|++|+|.++|
T Consensus 13 ~~L~l~~l~~~~~~------~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r 86 (375)
T PRK09452 13 PLVELRGISKSFDG------KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENR 86 (375)
T ss_pred ceEEEEEEEEEECC------eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHC
Confidence 45889999999853 2359999999999999999999999999999999999999999999987
Q ss_pred cEEEEcCCCCCCCC-CHHHHhccCCCC---CH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHH
Q 000503 673 SIAYVPQVPWILSG-TIRDNILFGKNY---DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 744 (1459)
Q Consensus 673 ~i~y~~Q~~~l~~~-ti~~nI~~g~~~---~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRval 744 (1459)
.++||+|++.+|.. ||+|||.|+... ++ ++.+++++..++...++. ...+|||||||||+|
T Consensus 87 ~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~p~~LSgGq~QRVaL 155 (375)
T PRK09452 87 HVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQR-----------KPHQLSGGQQQRVAI 155 (375)
T ss_pred CEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHHHH
Confidence 49999999999865 999999987432 22 234556666666544443 345899999999999
Q ss_pred HHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHh
Q 000503 745 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 745 ARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
||||+.+|+++|||||||+||+...+.+.+. +.... ..+.|+|+|||+.+.+. .||+|++|++|+|.+.|+++++..
T Consensus 156 ARaL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~ 234 (375)
T PRK09452 156 ARAVVNKPKVLLLDESLSALDYKLRKQMQNE-LKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYE 234 (375)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999998888776 33212 23789999999999865 599999999999999999999865
Q ss_pred c
Q 000503 823 S 823 (1459)
Q Consensus 823 ~ 823 (1459)
.
T Consensus 235 ~ 235 (375)
T PRK09452 235 E 235 (375)
T ss_pred C
Confidence 3
No 373
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=4.3e-35 Score=311.11 Aligned_cols=159 Identities=33% Similarity=0.518 Sum_probs=148.1
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh-HHHhcccE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFA 1301 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i~ 1301 (1459)
|+++|++++|+. .++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. +..|++++
T Consensus 1 l~~~~l~~~~~~--~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGG--VKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 578999999964 369999999999999999999999999999999999999999999999999988875 45678899
Q ss_pred EEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000503 1302 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1381 (1459)
Q Consensus 1302 ~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1381 (1459)
++|| ||+|||||++||||++++|++++|
T Consensus 79 ~~~q----------------------------------------------------LS~G~~qrl~laral~~~p~illl 106 (163)
T cd03216 79 MVYQ----------------------------------------------------LSVGERQMVEIARALARNARLLIL 106 (163)
T ss_pred EEEe----------------------------------------------------cCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999 999999999999999999999999
Q ss_pred eccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEE
Q 000503 1382 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVE 1435 (1459)
Q Consensus 1382 DEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE 1435 (1459)
||||++||.++.+.+.+.|++.. ++.|+|+++|+++.+.. ||++++|++|++++
T Consensus 107 DEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 107 DEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred ECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999998764 47899999999998876 89999999999975
No 374
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=368.95 Aligned_cols=216 Identities=19% Similarity=0.305 Sum_probs=182.9
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH-hccc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1300 (1459)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999964 369999999999999999999999999999999999999999999999999988776553 4679
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCC-----C-----ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHM-----N-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~-----~-----~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LA 1369 (1459)
+||||++.+|.+ |+++|+..... . +.++.. ..+.+.++.+|++...+....+||||||||++||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia 157 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMR-----VRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIA 157 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHH-----HHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHH
Confidence 999999998876 99999965321 0 111111 1223445555776555555668999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
|||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 158 KTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999998763 47899999999999976 89999999999999999988754
No 375
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.9e-35 Score=350.04 Aligned_cols=202 Identities=29% Similarity=0.393 Sum_probs=169.3
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------c
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 673 (1459)
.++++|+++.|.. ..+|+|+||++++|++++|+|||||||||||++|+|..+|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ 77 (353)
T TIGR03265 4 YLSIDNIRKRFGA------FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRD 77 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 4789999999853 2359999999999999999999999999999999999999999999986 4
Q ss_pred EEEEcCCCCCCC-CCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 674 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 674 i~y~~Q~~~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
++||+|++-+|. .||+|||.|+.. .+. ++.+++++..+|+... ..+..+|||||||||+||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRvaLA 146 (353)
T TIGR03265 78 YGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSE-----------RKYPGQLSGGQQQRVALA 146 (353)
T ss_pred EEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchh-----------hCChhhCCHHHHHHHHHH
Confidence 999999999996 599999998742 222 3445556655554322 345679999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 823 (1459)
|||+.+|+++|||||||+||+.+.+++.+.+..-....+.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 147 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 147 RALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999998877632111223789999999999875 5999999999999999999998654
No 376
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.3e-35 Score=325.70 Aligned_cols=194 Identities=26% Similarity=0.350 Sum_probs=164.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 689999999964 36999999999999999999999999999999999999999999999999987654 456788999
Q ss_pred EeCCCcCCC-ccHHHhcCcCCC----CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1303 VPQSPFLFE-GSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1303 VpQdp~lf~-gTIReNLdp~~~----~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
+||++.+++ .|++||+..... ..++++.++++.. |++.........||||||||++||||++++|+
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~---------gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 149 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQV---------GLAGFEDVPVRQLSAGQQRRVALARLWLTRAP 149 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHc---------CCHHHhhCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999998886 599999965321 1223444445544 44443444556899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhc-CEEEEE
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNM-DEILIL 1428 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~~-DrIlVl 1428 (1459)
|++|||||++||+++.+.+.+.|++.. +++|+|++||+++.+..| +|++++
T Consensus 150 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 150 LWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 999999999999999999999998763 478999999999999776 788776
No 377
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.8e-35 Score=367.39 Aligned_cols=216 Identities=19% Similarity=0.311 Sum_probs=181.5
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHH-Hhccc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1300 (1459)
-|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999963 46999999999999999999999999999999999999999999999999997665544 46789
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCC-------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~-------~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1459)
+|+||+|.+|+. |++||+.+... .+..+.. ..+.+.++.+|++........+||||||||++|||||
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 156 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMY-----AEADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVL 156 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHH-----HHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHH
Confidence 999999988875 99999975321 1111111 1123445555776555555568999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
+.+|++|||||||++||+.+.+.+.+.|++.. ++.|||+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (501)
T PRK10762 157 SFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE 230 (501)
T ss_pred hcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH
Confidence 99999999999999999999999999998753 47899999999999876 89999999999999999887643
No 378
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=341.68 Aligned_cols=205 Identities=25% Similarity=0.381 Sum_probs=169.8
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|+++.|+.... ..+++|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 i~~~~v~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 2 IKFEKVNYTYQPNSP-FASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred EEEEEEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 678999999964311 112469999999999999999999999999999999999999999998876
Q ss_pred ----cEEEEcCCC--CCCCCCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHH
Q 000503 673 ----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1459)
Q Consensus 673 ----~i~y~~Q~~--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 739 (1459)
.++||+|+| .+++.||.|||.|+.. .++ +++.++++..+|..++ ......+||||||
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSgGqk 150 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSGGQM 150 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCHHHH
Confidence 379999998 7888999999998742 222 3455666666664332 2345679999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000503 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1459)
Q Consensus 740 qRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~ 818 (1459)
||++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~ 229 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQL-FESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPS 229 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999988875 3321234789999999999886 59999999999999999999
Q ss_pred HHHh
Q 000503 819 DLAV 822 (1459)
Q Consensus 819 ~l~~ 822 (1459)
++..
T Consensus 230 ~~~~ 233 (288)
T PRK13643 230 DVFQ 233 (288)
T ss_pred HHHc
Confidence 8754
No 379
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=340.81 Aligned_cols=207 Identities=28% Similarity=0.443 Sum_probs=169.5
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|+.... ..+++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13637 2 SIKIENLTHIYMEGTP-FEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSD 80 (287)
T ss_pred EEEEEEEEEECCCCCc-cccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHH
Confidence 4788999999964211 113469999999999999999999999999999999999999999998865
Q ss_pred ---cEEEEcCCC--CCCCCCHHHHhccCCC---CCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHH
Q 000503 673 ---SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1459)
Q Consensus 673 ---~i~y~~Q~~--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkq 740 (1459)
.||||+|+| .+++.|++|||.|+.. .+++ +..++++.++|.. .+........|||||||
T Consensus 81 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~q 151 (287)
T PRK13637 81 IRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGGQKR 151 (287)
T ss_pred HhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHHHHH
Confidence 389999998 5778899999998632 2332 3455666666641 11234566799999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000503 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1459)
Q Consensus 741 RvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~ 818 (1459)
|++|||||+.+|+++||||||++||+.+.+++.+. +..... .++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~ 230 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNK-IKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPR 230 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999988876 333122 3789999999999875 59999999999999999998
Q ss_pred HHHh
Q 000503 819 DLAV 822 (1459)
Q Consensus 819 ~l~~ 822 (1459)
++..
T Consensus 231 ~~~~ 234 (287)
T PRK13637 231 EVFK 234 (287)
T ss_pred HHHh
Confidence 8754
No 380
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=341.71 Aligned_cols=205 Identities=27% Similarity=0.416 Sum_probs=169.7
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|++++|+.... ...++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 3 l~~~~l~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 3 ITFQKVEHRYQYKTP-FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEECCCCc-ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 689999999964211 113469999999999999999999999999999999999999999998876
Q ss_pred ----cEEEEcCCC--CCCCCCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHH
Q 000503 673 ----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1459)
Q Consensus 673 ----~i~y~~Q~~--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 739 (1459)
.|+||+|+| .+++.||+|||.|+.. .++ ++.+++++.++|..++. .....+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~----------~~~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL----------ARSPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh----------hCCcccCCHHHH
Confidence 389999998 5888899999988632 222 34566677777654332 345568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCH
Q 000503 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 817 (1459)
Q Consensus 740 qRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~ 817 (1459)
|||+|||||+.+|+++||||||++||+.+.+.+++. +..... .+.|+|++||+++.+. .||+|++|++|++++.|++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~-L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~ 230 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEM-FYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTP 230 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999988876 332112 3789999999999976 4999999999999999999
Q ss_pred HHHHh
Q 000503 818 ADLAV 822 (1459)
Q Consensus 818 ~~l~~ 822 (1459)
+++..
T Consensus 231 ~~~~~ 235 (290)
T PRK13634 231 REIFA 235 (290)
T ss_pred HHHhc
Confidence 88753
No 381
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=4e-35 Score=347.30 Aligned_cols=201 Identities=32% Similarity=0.435 Sum_probs=167.5
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------c
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 673 (1459)
.++++|+++.|.. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 ~L~i~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ 75 (353)
T PRK10851 2 SIEIANIKKSFGR------TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRK 75 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCC
Confidence 3678999998853 2359999999999999999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCC-CCHHHHhccCCC-------CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 674 IAYVPQVPWILS-GTIRDNILFGKN-------YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 674 i~y~~Q~~~l~~-~ti~~nI~~g~~-------~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
|+||+|++.++. .||+|||.|+.. .+. ++..++++..+|.... .....+||||||||
T Consensus 76 i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LSgGq~QR 144 (353)
T PRK10851 76 VGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLA-----------DRYPAQLSGGQKQR 144 (353)
T ss_pred EEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHH
Confidence 999999999986 499999998743 121 2344455555554322 34556999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1459)
|+|||||+.+|+++|||||||+||+.+.+.+.+. +.... ..+.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 valArAL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~ 223 (353)
T PRK10851 145 VALARALAVEPQILLLDEPFGALDAQVRKELRRW-LRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQ 223 (353)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999888776 33312 236899999999998765 99999999999999999999
Q ss_pred HHhc
Q 000503 820 LAVS 823 (1459)
Q Consensus 820 l~~~ 823 (1459)
+...
T Consensus 224 i~~~ 227 (353)
T PRK10851 224 VWRE 227 (353)
T ss_pred HHhC
Confidence 8653
No 382
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2e-35 Score=300.69 Aligned_cols=193 Identities=25% Similarity=0.379 Sum_probs=167.4
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
|+|+|++-.|+.. .++|+||||+|++||++.++||||||||||+|+|.++..|+.|+|.++|
T Consensus 2 I~f~~V~k~Y~~g-----~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~ 76 (223)
T COG2884 2 IRFENVSKAYPGG-----REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPF 76 (223)
T ss_pred eeehhhhhhcCCC-----chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccch
Confidence 6788999888753 2359999999999999999999999999999999999999999999876
Q ss_pred ---cEEEEcCCCCCCC-CCHHHHhccCCC---CC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
+||+|+|+--|.. -||.||+.|... .. +++..++++..+|.+....+|. .||||+|||
T Consensus 77 LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQR 145 (223)
T COG2884 77 LRRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQR 145 (223)
T ss_pred hhheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHH
Confidence 5999999998664 599999998643 22 2456678888899888888886 899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
|+||||+..+|++||-||||-+|||..+..|++- +..-...|.||+++||+.+.+.. --+++.+++|+++...
T Consensus 146 vaIARAiV~~P~vLlADEPTGNLDp~~s~~im~l-feeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 146 VAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRL-FEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHHHHccCCCeEeecCCCCCCChHHHHHHHHH-HHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 9999999999999999999999999999999875 33324568899999999999987 5689999999998643
No 383
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-35 Score=339.89 Aligned_cols=203 Identities=29% Similarity=0.404 Sum_probs=169.5
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|++++|+.... .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13650 4 IIEVKNLTFKYKEDQE---KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIR 80 (279)
T ss_pred eEEEEeEEEEcCCCCc---CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHH
Confidence 4789999999964211 2369999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCC--CCCCCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHH
Q 000503 673 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1459)
Q Consensus 673 -~i~y~~Q~~~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRv 742 (1459)
.++|++|+|. ++..||+|||.|+.. .++ ++..++++..+|+...+ ....+||||||||+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qrv 149 (279)
T PRK13650 81 HKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKE-----------REPARLSGGQKQRV 149 (279)
T ss_pred hhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHH
Confidence 4899999984 566799999998732 232 34566677777654333 33468999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHH
Q 000503 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 821 (1459)
Q Consensus 743 alARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 821 (1459)
+||||++.+|+++||||||++||+.+.+.+++. +..... .|+|+|++||+++.+..||+|++|++|+++..|+++++.
T Consensus 150 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 150 AIAGAVAMRPKIIILDEATSMLDPEGRLELIKT-IKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999998888775 333122 378999999999998789999999999999999998875
Q ss_pred h
Q 000503 822 V 822 (1459)
Q Consensus 822 ~ 822 (1459)
.
T Consensus 229 ~ 229 (279)
T PRK13650 229 S 229 (279)
T ss_pred c
Confidence 4
No 384
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-35 Score=331.22 Aligned_cols=198 Identities=33% Similarity=0.457 Sum_probs=163.9
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------cE
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 674 (1459)
++++|+++.|+. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 3 l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i 76 (239)
T cd03296 3 IEVRNVSKRFGD------FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNV 76 (239)
T ss_pred EEEEeEEEEECC------EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccce
Confidence 678999999853 2359999999999999999999999999999999999999999999875 48
Q ss_pred EEEcCCCCCCC-CCHHHHhccCCCC-------CH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHH
Q 000503 675 AYVPQVPWILS-GTIRDNILFGKNY-------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1459)
Q Consensus 675 ~y~~Q~~~l~~-~ti~~nI~~g~~~-------~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRv 742 (1459)
+|++|+|.++. .|++||+.++... +. ++..+.++.++++.. ......+||||||||+
T Consensus 77 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl 145 (239)
T cd03296 77 GFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWL-----------ADRYPAQLSGGQRQRV 145 (239)
T ss_pred EEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhh-----------hhcChhhCCHHHHHHH
Confidence 99999999886 5999999876321 21 223344555554322 2345568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000503 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 743 alARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 820 (1459)
+||||++.+|+++||||||++||+++.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 224 (239)
T cd03296 146 ALARALAVEPKVLLLDEPFGALDAKVRKELRRW-LRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEV 224 (239)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHH
Confidence 999999999999999999999999999988775 333122 37899999999998764 999999999999999998887
Q ss_pred H
Q 000503 821 A 821 (1459)
Q Consensus 821 ~ 821 (1459)
.
T Consensus 225 ~ 225 (239)
T cd03296 225 Y 225 (239)
T ss_pred h
Confidence 4
No 385
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.8e-35 Score=331.05 Aligned_cols=196 Identities=29% Similarity=0.392 Sum_probs=161.5
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc-----cCCCeEEEEcC---------
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM-----MLTHGSIHASG--------- 672 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~-----~~~~G~i~~~~--------- 672 (1459)
+++|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|.+ +|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 75 (227)
T cd03260 2 ELRDLNVYYGD------KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVD 75 (227)
T ss_pred EEEEEEEEcCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchH
Confidence 57888988853 23599999999999999999999999999999999999 99999998865
Q ss_pred ------cEEEEcCCCCCCCCCHHHHhccCCCC----C----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHH
Q 000503 673 ------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1459)
Q Consensus 673 ------~i~y~~Q~~~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 738 (1459)
.++|++|++.+++.|++||+.++... + +++..++++.+++...+...++ +.+|||||
T Consensus 76 ~~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~ 146 (227)
T cd03260 76 VLELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQ 146 (227)
T ss_pred HHHHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHH
Confidence 38999999998878999999875321 1 2334556666666543332211 46899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCH
Q 000503 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 817 (1459)
Q Consensus 739 kqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~ 817 (1459)
|||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||++++|++|++++.|++
T Consensus 147 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (227)
T cd03260 147 QQRLCLARALANEPEVLLLDEPTSALDPISTAKIEEL-IAE-LKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPT 224 (227)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCc
Confidence 9999999999999999999999999999999988876 333 223389999999999876 4999999999999998876
Q ss_pred HH
Q 000503 818 AD 819 (1459)
Q Consensus 818 ~~ 819 (1459)
++
T Consensus 225 ~~ 226 (227)
T cd03260 225 EQ 226 (227)
T ss_pred cc
Confidence 54
No 386
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-35 Score=340.04 Aligned_cols=206 Identities=23% Similarity=0.382 Sum_probs=167.8
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|+.... ...++|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (286)
T PRK13646 2 TIRFDNVSYTYQKGTP-YEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYI 80 (286)
T ss_pred EEEEEEEEEEECCCCc-cccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4789999999964211 113469999999999999999999999999999999999999999998875
Q ss_pred -----cEEEEcCCC--CCCCCCHHHHhccCCC---CCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHH
Q 000503 673 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1459)
Q Consensus 673 -----~i~y~~Q~~--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 738 (1459)
.||||+|+| .+++.|++|||.|+.. ++.+ +..+.++.++|+.+ .....+.+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq 150 (286)
T PRK13646 81 RPVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRD----------VMSQSPFQMSGGQ 150 (286)
T ss_pred HHHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHH
Confidence 379999998 5788899999998632 2332 23344444444322 1235667999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecC
Q 000503 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 816 (1459)
Q Consensus 739 kqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~ 816 (1459)
|||++||||++.+|+++||||||++||+.+.+.+.+. +.... ..+.|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 151 ~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~ 229 (286)
T PRK13646 151 MRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRL-LKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTS 229 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999988775 33211 24789999999999875 599999999999999999
Q ss_pred HHHHHh
Q 000503 817 SADLAV 822 (1459)
Q Consensus 817 ~~~l~~ 822 (1459)
++++..
T Consensus 230 ~~~~~~ 235 (286)
T PRK13646 230 PKELFK 235 (286)
T ss_pred HHHHHh
Confidence 988754
No 387
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3.5e-35 Score=348.00 Aligned_cols=202 Identities=27% Similarity=0.383 Sum_probs=170.0
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC--eEEEEcC---------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH--GSIHASG--------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~--G~i~~~~--------- 672 (1459)
..++++|+++.|.. ..+|+|+||++++|++++|+|||||||||||++|+|+.+|++ |+|.++|
T Consensus 4 ~~l~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~ 77 (362)
T TIGR03258 4 GGIRIDHLRVAYGA------NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH 77 (362)
T ss_pred eEEEEEEEEEEECC------eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH
Confidence 45889999999853 235999999999999999999999999999999999999999 9999876
Q ss_pred --cEEEEcCCCCCCCC-CHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHH
Q 000503 673 --SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1459)
Q Consensus 673 --~i~y~~Q~~~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRv 742 (1459)
.|+||+|++.+|.. ||+|||.|+.. .++ ++.+++++..+|+.... ....+|||||||||
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~-----------~~~~~LSgGq~QRv 146 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAA-----------HLPAQLSGGMQQRI 146 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhh-----------CChhhCCHHHHHHH
Confidence 49999999999865 99999998642 222 34556666666654333 34569999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC--CceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHH
Q 000503 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML--QKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSAD 819 (1459)
Q Consensus 743 alARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~--~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 819 (1459)
+|||||..+|+++|||||||+||+...+++.+.+ .....+ +.|+|+|||+.+.+. .||+|++|++|++++.|++++
T Consensus 147 aLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~ 225 (362)
T TIGR03258 147 AIARAIAIEPDVLLLDEPLSALDANIRANMREEI-AALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQA 225 (362)
T ss_pred HHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHH-HHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999888763 321222 689999999999875 499999999999999999999
Q ss_pred HHhc
Q 000503 820 LAVS 823 (1459)
Q Consensus 820 l~~~ 823 (1459)
+...
T Consensus 226 ~~~~ 229 (362)
T TIGR03258 226 LYDA 229 (362)
T ss_pred HHhC
Confidence 8654
No 388
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.9e-35 Score=322.06 Aligned_cols=189 Identities=29% Similarity=0.435 Sum_probs=161.3
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|+++.|+... .++++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~~~----~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 5 GEIEVENLSVRYAPDL----PPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CeEEEEEEEEEeCCCC----cccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 4588999999986321 2359999999999999999999999999999999999999999999875
Q ss_pred --cEEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHcc
Q 000503 673 --SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1459)
Q Consensus 673 --~i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 750 (1459)
.|+||+|+|.++++|++||+.+...+++++.. +++. ++.+...||||||||++||||++.
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~---~~l~---------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIY---GALR---------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHH---HHhh---------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 49999999999999999999875544433322 2221 345678999999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecC
Q 000503 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1459)
Q Consensus 751 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~ 816 (1459)
+|+++||||||++||+.+.+.+.+. +.. ..+++|+|++||+.+.+..||++++|++|++.+.|+
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKT-IRE-EFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 9999999999999999999888776 333 345789999999999988899999999999988775
No 389
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=7.5e-35 Score=320.78 Aligned_cols=194 Identities=23% Similarity=0.339 Sum_probs=164.3
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999964 36899999999999999999999999999999999999999999999999987643 567889999
Q ss_pred EeCCCcCC-CccHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000503 1303 VPQSPFLF-EGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1380 (1459)
Q Consensus 1303 VpQdp~lf-~gTIReNLdp~~~-~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1380 (1459)
+||++.++ ..|++||+..... ..++++.++++..++.+. ......+||||||||++||||++++|+++|
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~---------~~~~~~~LS~G~~qrl~laral~~~p~lll 148 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGF---------EDRPVAQLSAGQQRRVALARLLLSGRPLWI 148 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhh---------hcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999876 4799999976432 244555566666555432 233445799999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEE
Q 000503 1381 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILIL 1428 (1459)
Q Consensus 1381 LDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl 1428 (1459)
|||||++||+.+.+.+.+.|++.. +++|+|++||+...+.+ ||+++++
T Consensus 149 lDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 149 LDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 999999999999999999998754 47999999998776655 7999876
No 390
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-35 Score=349.94 Aligned_cols=200 Identities=28% Similarity=0.408 Sum_probs=168.0
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------c
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 673 (1459)
.++++|+++.|.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 3 ~l~i~~l~~~~~~------~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~ 76 (369)
T PRK11000 3 SVTLRNVTKAYGD------VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERG 76 (369)
T ss_pred EEEEEEEEEEeCC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCC
Confidence 3788999999852 2359999999999999999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCC-CHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 674 IAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 674 i~y~~Q~~~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
|+|++|++.++.. ||+|||.|+.. .+. ++.+++++.++++...+ ....+|||||||||+||
T Consensus 77 i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~-----------~~~~~LSgGq~QRvaLA 145 (369)
T PRK11000 77 VGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLD-----------RKPKALSGGQRQRVAIG 145 (369)
T ss_pred EEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhc-----------CChhhCCHHHHHHHHHH
Confidence 9999999998865 99999998642 222 34556666666654332 34468999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHh
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
|||+.+|+++|||||||+||+.+.+.+.+. +..... .+.|+|+|||+++.+. .||+|++|++|++.+.|+++++..
T Consensus 146 raL~~~P~lLLLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~ 223 (369)
T PRK11000 146 RTLVAEPSVFLLDEPLSNLDAALRVQMRIE-ISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYH 223 (369)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999888775 332122 3789999999999876 499999999999999999998854
No 391
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=2.9e-34 Score=324.61 Aligned_cols=176 Identities=22% Similarity=0.305 Sum_probs=132.9
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCc-CCCccHHHhcCcCCC-
Q 000503 1246 TIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-LFEGSLRDNLDPFHM- 1323 (1459)
Q Consensus 1246 ~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~-lf~gTIReNLdp~~~- 1323 (1459)
+|..||.+|++||||-||||++++|.|.++|++|+ ..++ +++|=||--. -|+|||++-|.-...
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~~----------~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EEDL----------KVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Cccc----------eEeecceeecCCCCCcHHHHHHHhhhh
Confidence 44567999999999999999999999999999998 2222 6888888432 388999887632111
Q ss_pred -CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHH
Q 000503 1324 -NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISS 1402 (1459)
Q Consensus 1324 -~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~ 1402 (1459)
+.+.-.+ .+.++.+.|+..+...-.+|||||.||+++|-||.|++++.+||||+|.||.+..-.+-++||+
T Consensus 429 ~~~~s~~~--------~ei~~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakvIRR 500 (591)
T COG1245 429 AFGSSYFK--------TEIVKPLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKVIRR 500 (591)
T ss_pred hcccchhH--------HhhcCccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHHHHH
Confidence 1111111 1233444666666666668999999999999999999999999999999999999888888887
Q ss_pred hc--CCcEEEEeccChhhHhh-cCEEEEEeC--CeEEEecChhHHh
Q 000503 1403 EC--KGMTVITIAHRISTVLN-MDEILILDH--GHLVEQGNPQTLL 1443 (1459)
Q Consensus 1403 ~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~--G~IvE~G~p~eLl 1443 (1459)
.. .++|.++|-|++-.+.. +||++|.+. |+=-....|..+.
T Consensus 501 ~~e~~~kta~vVdHDi~~~dyvsDr~ivF~GePg~~g~a~~P~~mr 546 (591)
T COG1245 501 FIENNEKTALVVDHDIYMIDYVSDRLIVFEGEPGKHGHASPPMSMR 546 (591)
T ss_pred HHhhcCceEEEEecceehhhhhhceEEEEecCCCccCcCCCCccHH
Confidence 53 58899999999988865 799999963 3222233455553
No 392
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-35 Score=326.70 Aligned_cols=191 Identities=30% Similarity=0.405 Sum_probs=157.8
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------cEE
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SIA 675 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i~ 675 (1459)
+++|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 2 ~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~ 75 (213)
T cd03259 2 ELKGLSKTYGS------VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIG 75 (213)
T ss_pred eeeeeEEEeCC------eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEE
Confidence 57888888853 2359999999999999999999999999999999999999999998875 489
Q ss_pred EEcCCCCCCC-CCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHH
Q 000503 676 YVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 747 (1459)
Q Consensus 676 y~~Q~~~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARa 747 (1459)
|++|+|.++. .|++||+.++.. .+. ++..++++.+++...+ .....+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLL-----------NRYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHHHHHHH
Confidence 9999998875 599999987532 222 2345566666665433 23446899999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 748 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 748 ly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREE-LKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999988876 333122 37899999999998765 9999999999998754
No 393
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=337.55 Aligned_cols=199 Identities=29% Similarity=0.391 Sum_probs=167.4
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|+.. .++|+|+||++++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~-----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 78 (274)
T PRK13647 4 IIEVEDLHFRYKDG-----TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVR 78 (274)
T ss_pred eEEEEEEEEEeCCC-----CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHH
Confidence 47899999998521 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCC--CCCCCCHHHHhccCCC---CC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHH
Q 000503 673 -SIAYVPQVP--WILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1459)
Q Consensus 673 -~i~y~~Q~~--~l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRv 742 (1459)
.++|++|+| .+++.|++||+.|+.. .+ ++++.++++.++|...... ....||||||||+
T Consensus 79 ~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgG~~qrv 147 (274)
T PRK13647 79 SKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDK-----------PPYHLSYGQKKRV 147 (274)
T ss_pred hhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------ChhhCCHHHHHHH
Confidence 489999998 5778899999998632 22 2345666777777543332 3358999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHH
Q 000503 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 743 alARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 820 (1459)
+||||+..+|+++||||||++||+.+.+++++. +.....+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 148 ~laraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 148 AIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEI-LDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999988776 3332234789999999999985 5999999999999999998664
No 394
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=8.3e-35 Score=326.92 Aligned_cols=205 Identities=27% Similarity=0.447 Sum_probs=173.3
Q ss_pred CCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC---------
Q 000503 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 672 (1459)
Q Consensus 602 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------- 672 (1459)
....++++|+++.|+.... .++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~ 84 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPD---TLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHK 84 (226)
T ss_pred cCceEEEEEEEEEeCCCCC---CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHH
Confidence 3456899999999964211 2359999999999999999999999999999999999999999999876
Q ss_pred ----cEEEEcCCCCCCCCCHHHHhccCCC-CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHH
Q 000503 673 ----SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 747 (1459)
Q Consensus 673 ----~i~y~~Q~~~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARa 747 (1459)
.++|++|+|.+++.|++||+.++.. .....+.+..+...++.-++.++.|.++..+.+..+|||||||||+||||
T Consensus 85 ~~~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~lara 164 (226)
T cd03248 85 YLHSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARA 164 (226)
T ss_pred HHHhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHH
Confidence 3899999999999999999987643 22222333334445666778888788888899999999999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeE
Q 000503 748 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 811 (1459)
Q Consensus 748 ly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i 811 (1459)
++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||+|++|++|++
T Consensus 165 l~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 165 LIRNPQVLILDEATSALDAESEQQVQQA-LYD-WPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999988776 333 3446899999999999988999999999874
No 395
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-35 Score=331.76 Aligned_cols=203 Identities=22% Similarity=0.293 Sum_probs=170.0
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc---CCCeEEEEcC---------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM---LTHGSIHASG--------- 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~---~~~G~i~~~~--------- 672 (1459)
.++++|+++.|+. +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|
T Consensus 2 ~~~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~ 75 (246)
T PRK14269 2 IAKTTNLNLFYGK------KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVV 75 (246)
T ss_pred ceeeeeeEEEECC------EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHH
Confidence 4678999999852 235999999999999999999999999999999999974 6999999876
Q ss_pred ----cEEEEcCCCCCCCCCHHHHhccCCCC---------CHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHH
Q 000503 673 ----SIAYVPQVPWILSGTIRDNILFGKNY---------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1459)
Q Consensus 673 ----~i~y~~Q~~~l~~~ti~~nI~~g~~~---------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 739 (1459)
.++|++|+|.+++.|++||+.++... ++++..++++.+++...+.. ...+++.+||||||
T Consensus 76 ~~~~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 148 (246)
T PRK14269 76 ALRKNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQ 148 (246)
T ss_pred HHhhhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHH
Confidence 48999999999999999999875321 12245567777777554432 23456779999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000503 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1459)
Q Consensus 740 qRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~ 818 (1459)
|||+||||++++|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 149 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 226 (246)
T PRK14269 149 QRLCIARALAIKPKLLLLDEPTSALDPISSGVIEEL-LKE-LSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESK 226 (246)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999998888776 433 335789999999999886 49999999999999999988
Q ss_pred HHHh
Q 000503 819 DLAV 822 (1459)
Q Consensus 819 ~l~~ 822 (1459)
++..
T Consensus 227 ~~~~ 230 (246)
T PRK14269 227 EFFE 230 (246)
T ss_pred HHHh
Confidence 8753
No 396
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-35 Score=339.86 Aligned_cols=206 Identities=22% Similarity=0.333 Sum_probs=168.4
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|+.... ...++|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (305)
T PRK13651 2 QIKVKNIVKIFNKKLP-TELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEK 80 (305)
T ss_pred EEEEEEEEEEECCCCC-ccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccc
Confidence 3688999999964321 112469999999999999999999999999999999999999999998742
Q ss_pred -------------------------cEEEEcCCC--CCCCCCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhh
Q 000503 673 -------------------------SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISL 718 (1459)
Q Consensus 673 -------------------------~i~y~~Q~~--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~ 718 (1459)
.||||+|+| .++..||+|||.|+.. .++ ++..++++.++|..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-- 158 (305)
T PRK13651 81 EKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY-- 158 (305)
T ss_pred cccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh--
Confidence 379999987 5778899999998742 232 2345566666664222
Q ss_pred ccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh
Q 000503 719 MVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS 798 (1459)
Q Consensus 719 ~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~ 798 (1459)
.+....+||||||||++|||||+.+|+++||||||++||+...+.+.+. +......|+|+|++||+++.+.
T Consensus 159 --------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivtHd~~~~~ 229 (305)
T PRK13651 159 --------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEI-FDNLNKQGKTIILVTHDLDNVL 229 (305)
T ss_pred --------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeeCHHHHH
Confidence 2345679999999999999999999999999999999999998888775 3321234789999999999875
Q ss_pred -cCCEEEEEeCCeEEEecCHHHHHh
Q 000503 799 -AADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 799 -~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
.||+|++|++|++++.|+++++..
T Consensus 230 ~~adrv~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 230 EWTKRTIFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred HhCCEEEEEECCEEEEECCHHHHhc
Confidence 599999999999999999988754
No 397
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-35 Score=363.81 Aligned_cols=211 Identities=24% Similarity=0.384 Sum_probs=177.8
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh-HHHhccc
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i 1300 (1459)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. +.+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 359999999999999999999999999999999999999999999999999976543 4567899
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCC------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~------~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
+|+||+|.+|++ |+++|+..... ....+.. ..+.+.++.+|++.........||||||||++|||||+
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~ 156 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALA 156 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHH
Confidence 999999998876 99999975321 1111111 12334555557765555556689999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecCh
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1439 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p 1439 (1459)
++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.+++
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 157 RNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred hCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999998764 47899999999999876 899999999999977654
No 398
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=369.95 Aligned_cols=221 Identities=24% Similarity=0.352 Sum_probs=180.3
Q ss_pred cEEEEEEEEEecCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCC----------
Q 000503 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII---------- 1289 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~---------- 1289 (1459)
.|+++|++++|+.. ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 59999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred CCChH---HHh-cccEEEeCCC--cCCCc-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCc---hhhhcCC
Q 000503 1290 NTPVR---DLR-GRFAVVPQSP--FLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESG 1355 (1459)
Q Consensus 1290 ~i~~~---~lR-~~i~~VpQdp--~lf~g-TIReNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lGLd---t~v~e~G 1355 (1459)
+.+.. .+| ++|++|+|+| .+++. ||++|+.... ..+..+.. ..+.+.++.+|++ .......
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~gL~~~~~~~~~~~ 166 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM-----VEAKRMLDQVRIPEAQTILSRYP 166 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHCCCCChhhHHhCCC
Confidence 22322 344 5799999999 57764 9999986421 11221111 1123344445663 3456667
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-C-CcEEEEeccChhhHhh-cCEEEEEeCCe
Q 000503 1356 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-K-GMTVITIAHRISTVLN-MDEILILDHGH 1432 (1459)
Q Consensus 1356 ~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~-~~TvI~IaHrl~ti~~-~DrIlVl~~G~ 1432 (1459)
.+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. + ++|||+|||+++.+.. ||||++|++|+
T Consensus 167 ~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~ 246 (623)
T PRK10261 167 HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGE 246 (623)
T ss_pred ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCe
Confidence 7899999999999999999999999999999999999999999998864 3 7899999999999876 89999999999
Q ss_pred EEEecChhHHhccCC
Q 000503 1433 LVEQGNPQTLLQDEC 1447 (1459)
Q Consensus 1433 IvE~G~p~eLl~~~~ 1447 (1459)
|++.|++++++..+.
T Consensus 247 i~~~g~~~~~~~~~~ 261 (623)
T PRK10261 247 AVETGSVEQIFHAPQ 261 (623)
T ss_pred ecccCCHHHhhcCCC
Confidence 999999999986554
No 399
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.7e-35 Score=331.28 Aligned_cols=197 Identities=25% Similarity=0.365 Sum_probs=162.4
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1459)
+++|+++.|+. .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (236)
T cd03219 2 EVRGLTKRFGG------LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARL 75 (236)
T ss_pred eeeeeEEEECC------EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhc
Confidence 56788888852 2359999999999999999999999999999999999999999998865
Q ss_pred cEEEEcCCCCCCCC-CHHHHhccCCCC-------------CH----HHHHHHHHHhcchhhHhhccCCCcccccCCCccc
Q 000503 673 SIAYVPQVPWILSG-TIRDNILFGKNY-------------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 734 (1459)
Q Consensus 673 ~i~y~~Q~~~l~~~-ti~~nI~~g~~~-------------~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~L 734 (1459)
.++|++|+|.++.+ |++|||.++... +. ++..+.++..+++ ...+....+|
T Consensus 76 ~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~L 144 (236)
T cd03219 76 GIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLA-----------DLADRPAGEL 144 (236)
T ss_pred CEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCcc-----------chhhCChhhC
Confidence 38999999998876 999999875321 11 1233334443332 2335567799
Q ss_pred CcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEE
Q 000503 735 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKW 813 (1459)
Q Consensus 735 SGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~ 813 (1459)
|||||||++||||++.+|++++|||||++||+.+.+++.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+
T Consensus 145 SgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~ 223 (236)
T cd03219 145 SYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAEL-IRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIA 223 (236)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe
Confidence 99999999999999999999999999999999999988876 33212257899999999999865 99999999999999
Q ss_pred ecCHHHHH
Q 000503 814 IGSSADLA 821 (1459)
Q Consensus 814 ~g~~~~l~ 821 (1459)
.|+++++.
T Consensus 224 ~~~~~~~~ 231 (236)
T cd03219 224 EGTPDEVR 231 (236)
T ss_pred ecCHHHhc
Confidence 99988874
No 400
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=363.86 Aligned_cols=212 Identities=24% Similarity=0.348 Sum_probs=179.5
Q ss_pred EEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh-HHHhcccEEE
Q 000503 1225 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFAVV 1303 (1459)
Q Consensus 1225 f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i~~V 1303 (1459)
++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+|++++|+
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999964 369999999999999999999999999999999999999999999999999976654 4467889999
Q ss_pred eCCCcCCCc-cHHHhcCcCCC------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1304 PQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1304 pQdp~lf~g-TIReNLdp~~~------~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
||++.+|.. |+++|+.+... .+.++.++ ...+.++.+|++........+||||||||++|||||+++|
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p 153 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKAFSYNA 153 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHHhCC
Confidence 999987764 99999975321 12222211 2334555567776666667789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 154 ~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 154 KIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 9999999999999999999999998763 47899999999999876 8999999999999999988874
No 401
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=328.17 Aligned_cols=201 Identities=26% Similarity=0.392 Sum_probs=168.4
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|.. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 76 (241)
T PRK14250 3 EIEFKEVSYSSFG---K---EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLR 76 (241)
T ss_pred eEEEEeEEEEeCC---e---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhh
Confidence 3688999998752 2 359999999999999999999999999999999999999999998876
Q ss_pred -cEEEEcCCCCCCCCCHHHHhccCCCC---CHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHH
Q 000503 673 -SIAYVPQVPWILSGTIRDNILFGKNY---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 748 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~~ti~~nI~~g~~~---~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARal 748 (1459)
.++|++|+|.+++.|++||+.++..+ +.++..+.++.++++.+. ......+||||||||++||||+
T Consensus 77 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la~al 146 (241)
T PRK14250 77 RKIGMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIARTL 146 (241)
T ss_pred hcEEEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHHHHH
Confidence 38999999999989999999876432 234455666666664322 1245668999999999999999
Q ss_pred ccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000503 749 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 749 y~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
+.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 147 ANNPEVLLLDEPTSALDPTSTEIIEEL-IVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 999999999999999999998887775 333122 37899999999999875 99999999999999999888753
No 402
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.4e-35 Score=320.23 Aligned_cols=193 Identities=20% Similarity=0.249 Sum_probs=162.5
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 689999999964 359999999999999999999999999999999999999999999999999875 34577899999
Q ss_pred EeCCCcCCC-ccHHHhcCcCCCC--ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000503 1303 VPQSPFLFE-GSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1459)
Q Consensus 1303 VpQdp~lf~-gTIReNLdp~~~~--~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1459)
+||++.+++ .|+++|+...... .+.+ +.+.++.+|++...+....+||+|||||++||||++++|++|
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~---------~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~~l 149 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVG---------ITELCRLFSLEHLIDYPCGLLSSGQKRQVALLRLWMSKAKLW 149 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHH---------HHHHHHHcCCchhhhCChhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 999998875 6999998643211 1122 334444445544444444579999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEE
Q 000503 1380 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILI 1427 (1459)
Q Consensus 1380 lLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlV 1427 (1459)
||||||++||..+.+.+.+.|++.. +++|+|++||+.+.+.+||.-++
T Consensus 150 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 150 LLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 9999999999999999999998753 57899999999999999986543
No 403
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-35 Score=326.43 Aligned_cols=197 Identities=21% Similarity=0.276 Sum_probs=162.5
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------c
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 673 (1459)
++++|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (220)
T cd03265 1 IEVENLVKKYGD------FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRR 74 (220)
T ss_pred CEEEEEEEEECC------EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhc
Confidence 357888888852 2359999999999999999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCC-CHHHHhccCC---CCC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 674 IAYVPQVPWILSG-TIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 674 i~y~~Q~~~l~~~-ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
++|++|++.++.. |++||+.++. ..+ +++.++.++.++++.... ....+||||||||++||
T Consensus 75 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~la 143 (220)
T cd03265 75 IGIVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAAD-----------RLVKTYSGGMRRRLEIA 143 (220)
T ss_pred EEEecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CChhhCCHHHHHHHHHH
Confidence 8999999988765 9999998642 122 234556666666654322 33458999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC-CceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~-~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 820 (1459)
||++.+|+++||||||++||+.+.+.+.+. +.....+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 144 RSLVHRPEVLFLDEPTIGLDPQTRAHVWEY-IEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999888775 3321223 7899999999999875 999999999999998887664
No 404
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=345.71 Aligned_cols=204 Identities=26% Similarity=0.362 Sum_probs=169.0
Q ss_pred CceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000503 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1459)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1459)
...++++|+++.|.. ..+|+|+||++++|++++|+|||||||||||++|+|+.+|++|+|.++|
T Consensus 17 ~~~l~l~~v~~~~~~------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~ 90 (377)
T PRK11607 17 TPLLEIRNLTKSFDG------QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQ 90 (377)
T ss_pred CceEEEEeEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHH
Confidence 346899999999852 2359999999999999999999999999999999999999999999986
Q ss_pred -cEEEEcCCCCCCCC-CHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHH
Q 000503 673 -SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRva 743 (1459)
.||||+|++-+|.. ||+|||.|+.. .++ ++..++++..++.... .....+|||||||||+
T Consensus 91 r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRVa 159 (377)
T PRK11607 91 RPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFA-----------KRKPHQLSGGQRQRVA 159 (377)
T ss_pred CCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 48999999999965 99999998742 222 2344555655554332 3345689999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHh
Q 000503 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
|||||+.+|+++|||||||+||+...+.+.+.+..-....+.|+|+|||+.+.+. .||+|++|++|++++.|+++++..
T Consensus 160 LARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~ 239 (377)
T PRK11607 160 LARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYE 239 (377)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHh
Confidence 9999999999999999999999999888776532111224789999999999865 599999999999999999999865
Q ss_pred c
Q 000503 823 S 823 (1459)
Q Consensus 823 ~ 823 (1459)
.
T Consensus 240 ~ 240 (377)
T PRK11607 240 H 240 (377)
T ss_pred C
Confidence 3
No 405
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=331.84 Aligned_cols=204 Identities=24% Similarity=0.331 Sum_probs=168.4
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------ 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~------ 672 (1459)
..++++|+++.|.. . ++|+|+||++++|++++|+||||||||||+++|+|..+ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~---~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 78 (253)
T PRK14242 5 PKMEARGLSFFYGD---F---QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDP 78 (253)
T ss_pred cEEEEeeeEEEECC---e---eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEcccc
Confidence 35889999999852 2 35999999999999999999999999999999999864 5899998765
Q ss_pred ---------cEEEEcCCCCCCCCCHHHHhccCCC---C-C----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccC
Q 000503 673 ---------SIAYVPQVPWILSGTIRDNILFGKN---Y-D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1459)
Q Consensus 673 ---------~i~y~~Q~~~l~~~ti~~nI~~g~~---~-~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 735 (1459)
.++|++|++.+++.|++||+.++.. . + +++.++.++.+++...+. +..+....+||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 151 (253)
T PRK14242 79 HVDVVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLS 151 (253)
T ss_pred ccCHHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCC
Confidence 3899999999998999999987521 1 1 234445566666543322 23456678999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000503 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1459)
Q Consensus 736 GGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1459)
|||||||+||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 152 gGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~ 229 (253)
T PRK14242 152 GGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEEL-IHE-LKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEV 229 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999888776 433 3446899999999999864 999999999999999
Q ss_pred cCHHHHHh
Q 000503 815 GSSADLAV 822 (1459)
Q Consensus 815 g~~~~l~~ 822 (1459)
|+++++..
T Consensus 230 g~~~~~~~ 237 (253)
T PRK14242 230 GPTEQIFT 237 (253)
T ss_pred CCHHHHHc
Confidence 99888753
No 406
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1e-33 Score=364.86 Aligned_cols=214 Identities=25% Similarity=0.338 Sum_probs=147.9
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHh------ccCC----C-----------CCce
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALF------RLTP----I-----------CGGQ 1280 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~------rl~~----~-----------~~G~ 1280 (1459)
.++++|++. ..|+|+||+|++||.+||+|+||||||||++-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 488888862 2599999999999999999999999999998333 1111 1 1123
Q ss_pred EEECCEeCCCCCh----------HHHhcccEEEeCC------CcCCCc--------------cHHHhcCcC---------
Q 000503 1281 ILVDGLNIINTPV----------RDLRGRFAVVPQS------PFLFEG--------------SLRDNLDPF--------- 1321 (1459)
Q Consensus 1281 I~IDG~di~~i~~----------~~lR~~i~~VpQd------p~lf~g--------------TIReNLdp~--------- 1321 (1459)
|.||-.+|..-++ +.+|.-++=.|+- +-.|+- .+.-++.+.
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 5666666643332 2445555544431 222221 111111000
Q ss_pred ---CCCChH-----------------HHHHHHHHh-------cHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1322 ---HMNDDL-----------------KIWSVLEKC-------HVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1322 ---~~~~d~-----------------ei~~aL~~~-------~l~~~i~~lGLdt-~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
..+.++ .+.++++-. ...+.++.+||+. .++.....|||||+||++|||+|.
T Consensus 765 C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~ 844 (924)
T TIGR00630 765 CKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELS 844 (924)
T ss_pred cCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHh
Confidence 011111 011111110 1112333448875 477888899999999999999999
Q ss_pred c---CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEE------eCCeEEEecChhHH
Q 000503 1374 K---SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL------DHGHLVEQGNPQTL 1442 (1459)
Q Consensus 1374 r---~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl------~~G~IvE~G~p~eL 1442 (1459)
+ +|+++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++
T Consensus 845 ~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 845 KRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 7 589999999999999999999999998764 588999999999999999999999 79999999999986
No 407
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.1e-34 Score=392.91 Aligned_cols=219 Identities=24% Similarity=0.332 Sum_probs=190.5
Q ss_pred ccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
..|+++|++++|+++..++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.++|.|+.. +....|+++
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~I 1005 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSL 1005 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcE
Confidence 3699999999996434569999999999999999999999999999999999999999999999999975 566789999
Q ss_pred EEEeCCCcCCCc-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1301 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1301 ~~VpQdp~lf~g-TIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
+++||++.+|+. |++|||.++.. .+.++..+ ...+.++.+||+...+....+||||||||++|||||+.+|
T Consensus 1006 G~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~vgL~~~~~~~~~~LSGGqKQRLsLArALi~~P 1080 (2272)
T TIGR01257 1006 GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDA 1080 (2272)
T ss_pred EEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999999999975 99999975421 12222211 2234455557777677777889999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
+||+||||||+||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 1081 kVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~ 1150 (2272)
T TIGR01257 1081 KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNC 1150 (2272)
T ss_pred CEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHh
Confidence 999999999999999999999999988779999999999999976 899999999999999999999764
No 408
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=6.6e-34 Score=379.47 Aligned_cols=211 Identities=24% Similarity=0.288 Sum_probs=154.0
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHH---------HHhccCCCCC----c----eEEEC
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILN---------ALFRLTPICG----G----QILVD 1284 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~---------~L~rl~~~~~----G----~I~ID 1284 (1459)
.++++|++. ..|+|+|++|++||.+||.|+||||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 478888762 2699999999999999999999999999999 4445332211 1 24666
Q ss_pred CEeCCCCCh----H------HHhc---------c-----cEEEeCC------------------C---------------
Q 000503 1285 GLNIINTPV----R------DLRG---------R-----FAVVPQS------------------P--------------- 1307 (1459)
Q Consensus 1285 G~di~~i~~----~------~lR~---------~-----i~~VpQd------------------p--------------- 1307 (1459)
..++..-+. . ++|+ + ..+..|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 655543222 1 4441 1 1112221 1
Q ss_pred -----cCCCc-cHHHhcCcCCC-----C-ChHHHHHHHHHhcHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHHHHc-
Q 000503 1308 -----FLFEG-SLRDNLDPFHM-----N-DDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLARALL- 1373 (1459)
Q Consensus 1308 -----~lf~g-TIReNLdp~~~-----~-~d~ei~~aL~~~~l~~~i~~lGLdt~-v~e~G~~LSgGQrQrl~LARALL- 1373 (1459)
+.+.+ ||.|||++... . +.+++.+.+ +.++.+||+.. .+....+||||||||++|||||+
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l------~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~ 826 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKI------HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLA 826 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHH------HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhh
Confidence 13333 77777765421 0 112222222 23444588775 68888899999999999999998
Q ss_pred --cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEe------CCeEEEecChhHHhc
Q 000503 1374 --KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILD------HGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1374 --r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~------~G~IvE~G~p~eLl~ 1444 (1459)
++|+++||||||++||..+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|++++.|+|+++..
T Consensus 827 ~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpeel~~ 906 (1809)
T PRK00635 827 PSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPEELIH 906 (1809)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHHHHHh
Confidence 5999999999999999999999999998764 5889999999999998899999996 799999999999986
Q ss_pred c
Q 000503 1445 D 1445 (1459)
Q Consensus 1445 ~ 1445 (1459)
.
T Consensus 907 ~ 907 (1809)
T PRK00635 907 L 907 (1809)
T ss_pred c
Confidence 3
No 409
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-35 Score=318.34 Aligned_cols=196 Identities=27% Similarity=0.434 Sum_probs=168.2
Q ss_pred cEEEEEEEEEecCCC-------CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChH
Q 000503 1222 LIEFQNVTMRYKPSL-------PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~-------~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~ 1294 (1459)
-++++|++..|+... -.+++||||+|++||.+||||.|||||||+.++|+|+++|++|+|.++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 478999999996432 26899999999999999999999999999999999999999999999999987766
Q ss_pred HHhcccEEEeCCCcCCCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000503 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1459)
Q Consensus 1295 ~lR~~i~~VpQdp~lf~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1459)
....++++.+.|+++|+.+. ........||||||||++|||||.-
T Consensus 82 ---------------------------~~~~~~~v~elL~~Vgl~~~--------~~~ryPhelSGGQrQRi~IARALal 126 (268)
T COG4608 82 ---------------------------KEERRERVLELLEKVGLPEE--------FLYRYPHELSGGQRQRIGIARALAL 126 (268)
T ss_pred ---------------------------hhHHHHHHHHHHHHhCCCHH--------HhhcCCcccCchhhhhHHHHHHHhh
Confidence 11123456666666664332 2344556799999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000503 1375 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1451 (1459)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~ 1451 (1459)
+|++++.|||||+||.-.++.|.+.+.+.- .+-|.++|||+++.++. ||||.||..|+|+|.|+-+++.+++...|-
T Consensus 127 ~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~p~HpYT 206 (268)
T COG4608 127 NPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSNPLHPYT 206 (268)
T ss_pred CCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhCCCCHHH
Confidence 999999999999999999999999987653 38899999999999998 799999999999999999999999887776
Q ss_pred HHH
Q 000503 1452 SFV 1454 (1459)
Q Consensus 1452 ~l~ 1454 (1459)
+..
T Consensus 207 k~L 209 (268)
T COG4608 207 KAL 209 (268)
T ss_pred HHH
Confidence 654
No 410
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-34 Score=300.02 Aligned_cols=213 Identities=24% Similarity=0.357 Sum_probs=182.2
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+.+|++++-. .+.+|+++||+++|||.+||+||||||||||+++|.|...|++|++.++|.++++.+..++-++-++
T Consensus 2 i~a~nls~~~~--Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLA--GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEee--cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 67889987764 3469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcC-CCccHHHhcCcCC----C---CChHH--HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000503 1303 VPQSPFL-FEGSLRDNLDPFH----M---NDDLK--IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1459)
Q Consensus 1303 VpQdp~l-f~gTIReNLdp~~----~---~~d~e--i~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1459)
.||+..+ |+-|++|-+.++. . ..+++ ..+++.++++..+- +..-..|||||+||+.|||.|
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la---------~R~y~~LSGGEqQRVqlARvL 150 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLA---------GRDYRTLSGGEQQRVQLARVL 150 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhh---------ccchhhcCchHHHHHHHHHHH
Confidence 9999976 8999999986542 1 11233 45677777654322 222336999999999999999
Q ss_pred cc------CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1373 LK------SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1373 Lr------~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
.+ ++++|+||||||+||..-...+.++.|+.. +++.|+.|-|+|+.... ||||++|.+|||+..|+|++.+.
T Consensus 151 aQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~vlt 230 (259)
T COG4559 151 AQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDVLT 230 (259)
T ss_pred HHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHhcC
Confidence 85 357999999999999999999999998874 58999999999997654 79999999999999999999987
Q ss_pred cC
Q 000503 1445 DE 1446 (1459)
Q Consensus 1445 ~~ 1446 (1459)
.+
T Consensus 231 ~E 232 (259)
T COG4559 231 DE 232 (259)
T ss_pred HH
Confidence 53
No 411
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7e-35 Score=322.36 Aligned_cols=188 Identities=27% Similarity=0.415 Sum_probs=157.1
Q ss_pred EEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------cEEEE
Q 000503 608 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------SIAYV 677 (1459)
Q Consensus 608 ~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------~i~y~ 677 (1459)
++|+++.|+.. .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 2 ~~~l~~~~~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~ 76 (205)
T cd03226 2 IENISFSYKKG-----TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYV 76 (205)
T ss_pred cccEEEEeCCc-----CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEE
Confidence 46777877531 2359999999999999999999999999999999999999999999876 48999
Q ss_pred cCCC--CCCCCCHHHHhccCCC---CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCC
Q 000503 678 PQVP--WILSGTIRDNILFGKN---YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 752 (1459)
Q Consensus 678 ~Q~~--~l~~~ti~~nI~~g~~---~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~ 752 (1459)
+|+| .+++.|++||+.++.. .++++..++++.+++...... ...+||||||||++||||+..+|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKER-----------HPLSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCC-----------CchhCCHHHHHHHHHHHHHHhCC
Confidence 9998 4677899999987642 223466777888877644332 33589999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEE
Q 000503 753 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 812 (1459)
Q Consensus 753 ~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~ 812 (1459)
++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGEL-IRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999998888775 43312457899999999999875 9999999999874
No 412
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-35 Score=325.62 Aligned_cols=197 Identities=29% Similarity=0.372 Sum_probs=161.0
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------cEEEEc
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAYVP 678 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~y~~ 678 (1459)
+++|+++.|+... ..+++|+|+||+|++|++++|+||||||||||+++|+|..+|++|+|.++| .++|++
T Consensus 2 ~~~~l~~~~~~~~--~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~ 79 (220)
T cd03293 2 EVRNVSKTYGGGG--GAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVF 79 (220)
T ss_pred eEEEEEEEcCCCC--cceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEe
Confidence 5788888885311 112469999999999999999999999999999999999999999999876 589999
Q ss_pred CCCCCCC-CCHHHHhccCCC---CC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHcc
Q 000503 679 QVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1459)
Q Consensus 679 Q~~~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 750 (1459)
|+|.++. .|++||+.++.. .+ +++..+.++.++++..+. ....+||||||||++||||++.
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 80 QQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFEN-----------AYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred cccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHHHHHHHHHHHHHc
Confidence 9999887 699999987532 22 234455666666654333 3345899999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhh-cCCEEEEEe--CCeEEEecCH
Q 000503 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMD--KGQVKWIGSS 817 (1459)
Q Consensus 751 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~-~~d~i~~l~--~G~i~~~g~~ 817 (1459)
+|+++||||||++||+.+.+.+++. +.... ..++|+|++||+++.+. .||++++|+ +|++++.++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEE-LLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999988876 33211 23789999999999876 499999999 7999987764
No 413
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4.7e-35 Score=326.56 Aligned_cols=190 Identities=25% Similarity=0.402 Sum_probs=157.0
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|+++.|+.. . +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (216)
T TIGR00960 2 IRFEQVSKAYPGG-H---QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPF 77 (216)
T ss_pred eEEEEEEEEecCC-C---eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHH
Confidence 5788999998532 1 2359999999999999999999999999999999999999999998875
Q ss_pred ---cEEEEcCCCCCCC-CCHHHHhccCCC---CC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
.++|++|+|.++. .|++||+.++.. .+ +++..++++.+++..... ....+||||||||
T Consensus 78 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qr 146 (216)
T TIGR00960 78 LRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAH-----------ALPMQLSGGEQQR 146 (216)
T ss_pred HHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHH
Confidence 3899999999886 599999987521 22 234556667666654333 2345899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeE
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 811 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i 811 (1459)
++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++
T Consensus 147 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 147 VAIARAIVHKPPLLLADEPTGNLDPELSRDIMRL-FEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999988876 33312347899999999999875 999999999974
No 414
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.1e-34 Score=329.60 Aligned_cols=198 Identities=25% Similarity=0.382 Sum_probs=162.6
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|+++.|..+ +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (243)
T TIGR02315 2 LEVENLSKVYPNG-----KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRK 76 (243)
T ss_pred eEEEeeeeecCCC-----cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHH
Confidence 5678899988511 2359999999999999999999999999999999999999999998865
Q ss_pred ---cEEEEcCCCCCCC-CCHHHHhccCCC------------CC---HHHHHHHHHHhcchhhHhhccCCCcccccCCCcc
Q 000503 673 ---SIAYVPQVPWILS-GTIRDNILFGKN------------YD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~-~ti~~nI~~g~~------------~~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~ 733 (1459)
.++|++|++.++. .|++||+.++.. .. .++..++++.+++... ......+
T Consensus 77 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~ 145 (243)
T TIGR02315 77 LRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADK-----------AYQRADQ 145 (243)
T ss_pred HHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhh-----------hcCCccc
Confidence 2899999998886 599999987531 01 1234445555555432 2345679
Q ss_pred cCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeE
Q 000503 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQV 811 (1459)
Q Consensus 734 LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~-~~d~i~~l~~G~i 811 (1459)
||||||||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||++++|++|++
T Consensus 146 LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i 224 (243)
T TIGR02315 146 LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDY-LKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEI 224 (243)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 999999999999999999999999999999999998888775 333122 3789999999999986 5999999999999
Q ss_pred EEecCHHHH
Q 000503 812 KWIGSSADL 820 (1459)
Q Consensus 812 ~~~g~~~~l 820 (1459)
++.|+++++
T Consensus 225 ~~~~~~~~~ 233 (243)
T TIGR02315 225 VFDGAPSEL 233 (243)
T ss_pred EecCCHHHh
Confidence 999988775
No 415
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.5e-34 Score=321.62 Aligned_cols=195 Identities=24% Similarity=0.312 Sum_probs=164.1
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.++++|++++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNE--EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCC--ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 5999999999964 3599999999999999999999999999999999999999999999999998752 3456799
Q ss_pred EEeCCCcCCCc-cHHHhcCcCCC---C-ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1302 VVPQSPFLFEG-SLRDNLDPFHM---N-DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1302 ~VpQdp~lf~g-TIReNLdp~~~---~-~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
|+||+|.++++ |++||+..... . .++.+.++++. +|+..........||+|||||++||||++++|
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAI---------VGLAGYEDTLVRQLSAGQKKRLALARLWLSPA 156 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHH---------cCChhhccCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 99999854211 1 12223333333 35544444555679999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeC
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDH 1430 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~ 1430 (1459)
+||+|||||++||.++.+.+.+.+++.. +++|+|++||+++.+.+ ||++++++.
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 157 PLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999999998653 47899999999999976 799999875
No 416
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=333.31 Aligned_cols=202 Identities=26% Similarity=0.394 Sum_probs=170.3
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|... . +++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~-~---~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13635 5 IIRVEHISFRYPDA-A---TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVR 80 (279)
T ss_pred eEEEEEEEEEeCCC-C---ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHh
Confidence 58899999999532 1 2369999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCC--CCCCCCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHH
Q 000503 673 -SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1459)
Q Consensus 673 -~i~y~~Q~~--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRv 742 (1459)
.|+|++|+| .+++.||+|||.++.. +++ ++..++++.++|+..+... ...||||||||+
T Consensus 81 ~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qrv 149 (279)
T PRK13635 81 RQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNRE-----------PHRLSGGQKQRV 149 (279)
T ss_pred hheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHH
Confidence 489999998 4667899999987632 222 3456667777776554433 348999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHH
Q 000503 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 821 (1459)
Q Consensus 743 alARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 821 (1459)
+||||++.+|+++||||||++||+.+.+.+++. +..... .+.|+|++||+++.+..||+|++|++|++++.|+.+++.
T Consensus 150 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 150 AIAGVLALQPDIIILDEATSMLDPRGRREVLET-VRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999988876 333122 378999999999998889999999999999999988875
Q ss_pred h
Q 000503 822 V 822 (1459)
Q Consensus 822 ~ 822 (1459)
.
T Consensus 229 ~ 229 (279)
T PRK13635 229 K 229 (279)
T ss_pred c
Confidence 4
No 417
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-35 Score=293.90 Aligned_cols=219 Identities=24% Similarity=0.405 Sum_probs=186.2
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCC----------
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT---------- 1291 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i---------- 1291 (1459)
.++.+|+..+|.+. .|||+||++.++|+.|.|+|.|||||||++.++.=+-.|+.|+|.++|..|...
T Consensus 6 ~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 6 ALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 58899999999765 499999999999999999999999999999999999999999999999887532
Q ss_pred ---ChHHHhcccEEEeCCCcCCCc-cHHHhcC--cCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhH
Q 000503 1292 ---PVRDLRGRFAVVPQSPFLFEG-SLRDNLD--PFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1362 (1459)
Q Consensus 1292 ---~~~~lR~~i~~VpQdp~lf~g-TIReNLd--p~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQ 1362 (1459)
.++.+|+++++|.|+--|.+- |+-||.- |-. ...++.+..| ..+++..|++..-..-...|||||
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~A------e~~L~kVGi~ek~~~YP~~LSGGQ 157 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERA------EKYLAKVGIAEKADAYPAHLSGGQ 157 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHH------HHHHHHhCchhhhhcCccccCchH
Confidence 256789999999999888875 9999973 322 2223322222 122333366555556667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChh
Q 000503 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1440 (1459)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~ 1440 (1459)
+||.+|||||.-+|+++++|||||+||++--..+.++|++.. .|+|.++|||-+...++ +..|+.+.+|+|-|+|+|+
T Consensus 158 QQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~ 237 (256)
T COG4598 158 QQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPPE 237 (256)
T ss_pred HHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCChH
Confidence 999999999999999999999999999999999999998765 59999999999999998 6999999999999999999
Q ss_pred HHhccCCc
Q 000503 1441 TLLQDECS 1448 (1459)
Q Consensus 1441 eLl~~~~~ 1448 (1459)
++..++.|
T Consensus 238 qvf~nP~S 245 (256)
T COG4598 238 QVFGNPQS 245 (256)
T ss_pred HHhcCCCC
Confidence 99999987
No 418
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=330.08 Aligned_cols=204 Identities=26% Similarity=0.333 Sum_probs=167.8
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------ 672 (1459)
..++++|+++.|.. . ++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 79 (254)
T PRK14273 6 AIIETENLNLFYTD---F---KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSN 79 (254)
T ss_pred ceEEEeeeEEEeCC---c---eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccc
Confidence 46899999999853 2 359999999999999999999999999999999999987 489998754
Q ss_pred ---------cEEEEcCCCCCCCCCHHHHhccCCC----CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccC
Q 000503 673 ---------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1459)
Q Consensus 673 ---------~i~y~~Q~~~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 735 (1459)
.++|++|++.+++.|++|||.++.. .+. ++..++++.+++...+. + ....+..+||
T Consensus 80 ~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~----~~~~~~~~LS 152 (254)
T PRK14273 80 NFDILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK---D----KLNTNALSLS 152 (254)
T ss_pred cccHHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH---H----HHhCCcccCC
Confidence 3899999999998999999987642 122 23344555555532221 1 2344677999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000503 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1459)
Q Consensus 736 GGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1459)
|||||||+||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 153 gG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~ 230 (254)
T PRK14273 153 GGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEEL-IIN-LKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEE 230 (254)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999988875 333 3456899999999999765 999999999999999
Q ss_pred cCHHHHHh
Q 000503 815 GSSADLAV 822 (1459)
Q Consensus 815 g~~~~l~~ 822 (1459)
|+++++..
T Consensus 231 g~~~~~~~ 238 (254)
T PRK14273 231 SSTDELFF 238 (254)
T ss_pred CCHHHHHh
Confidence 99988754
No 419
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.2e-34 Score=329.98 Aligned_cols=201 Identities=27% Similarity=0.377 Sum_probs=166.4
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC-----CeEEEEcC--------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT-----HGSIHASG-------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~-----~G~i~~~~-------- 672 (1459)
++++|+++.|.. . .+++|+||++++||+++|+|+||||||||+++|+|.++|+ +|+|.++|
T Consensus 2 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~ 75 (247)
T TIGR00972 2 IEIENLNLFYGE---K---EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKI 75 (247)
T ss_pred EEEEEEEEEECC---e---eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEcccccc
Confidence 678899998853 1 3599999999999999999999999999999999999998 99998864
Q ss_pred -------cEEEEcCCCCCCCCCHHHHhccCCC----CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcH
Q 000503 673 -------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1459)
Q Consensus 673 -------~i~y~~Q~~~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 737 (1459)
.++|++|++++++.|++||+.++.. .+. ++..++++..++..+++ ........+||||
T Consensus 76 ~~~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG 148 (247)
T TIGR00972 76 DVVELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGG 148 (247)
T ss_pred chHHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHH
Confidence 3899999999999999999987532 122 23445555556553221 1234566799999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecC
Q 000503 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1459)
Q Consensus 738 QkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~ 816 (1459)
||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 149 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (247)
T TIGR00972 149 QQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEEL-IQE-LKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGP 226 (247)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999988775 433 3345899999999998765 99999999999999999
Q ss_pred HHHHH
Q 000503 817 SADLA 821 (1459)
Q Consensus 817 ~~~l~ 821 (1459)
++++.
T Consensus 227 ~~~~~ 231 (247)
T TIGR00972 227 TEQIF 231 (247)
T ss_pred HHHHH
Confidence 88874
No 420
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=343.32 Aligned_cols=204 Identities=28% Similarity=0.365 Sum_probs=167.0
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|++++|+... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~--~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 79 (343)
T PRK11153 2 IELKNISKVFPQGG--RTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRK 79 (343)
T ss_pred EEEEeEEEEeCCCC--CceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHH
Confidence 57899999986311 112469999999999999999999999999999999999999999998875
Q ss_pred ---cEEEEcCCCCCCC-CCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
.|+|++|++.++. .|++|||.++.. .+. ++..+.++..++... ......+||||||||
T Consensus 80 ~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qR 148 (343)
T PRK11153 80 ARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDK-----------ADRYPAQLSGGQKQR 148 (343)
T ss_pred HhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 3999999999886 699999987532 222 233444555554322 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~-~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1459)
|+||||++.+|+++||||||++||+.+.+.+.+. +... ...++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 149 v~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~ 227 (343)
T PRK11153 149 VAIARALASNPKVLLCDEATSALDPATTRSILEL-LKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSE 227 (343)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999988876 3321 1237899999999999875 99999999999999999998
Q ss_pred HHhc
Q 000503 820 LAVS 823 (1459)
Q Consensus 820 l~~~ 823 (1459)
+...
T Consensus 228 ~~~~ 231 (343)
T PRK11153 228 VFSH 231 (343)
T ss_pred HHhC
Confidence 8643
No 421
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.4e-34 Score=360.10 Aligned_cols=221 Identities=24% Similarity=0.398 Sum_probs=179.9
Q ss_pred cEEEEEEEEEecCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC-----CCceEEECCEeCCCCChH
Q 000503 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTPVR 1294 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i~~~ 1294 (1459)
-|+++|++++|+.+ ..++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 24699999999999999999999999999999999999987 799999999999877654
Q ss_pred H---Hh-cccEEEeCCCc--CCC-ccHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCch---hhhcCCCCCCh
Q 000503 1295 D---LR-GRFAVVPQSPF--LFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLET---FVKESGISFSV 1360 (1459)
Q Consensus 1295 ~---lR-~~i~~VpQdp~--lf~-gTIReNLdp~----~~~~d~ei~~aL~~~~l~~~i~~lGLdt---~v~e~G~~LSg 1360 (1459)
. .| ++++||||+|. +++ -|+++|+... ...+.++.. ..+.+.++.+|++. .......+|||
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~~~~LSg 159 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAAR-----GEILNCLDRVGIRQAAKRLTDYPHQLSG 159 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHCCCCChHHHHhhCCcccCH
Confidence 3 34 57999999985 444 4899987521 111221111 11233444456643 23555668999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1361 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1361 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|
T Consensus 160 Ge~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g 239 (529)
T PRK15134 160 GERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQN 239 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999998863 37899999999999876 8999999999999999
Q ss_pred ChhHHhccCC
Q 000503 1438 NPQTLLQDEC 1447 (1459)
Q Consensus 1438 ~p~eLl~~~~ 1447 (1459)
++++++..+.
T Consensus 240 ~~~~~~~~~~ 249 (529)
T PRK15134 240 RAATLFSAPT 249 (529)
T ss_pred CHHHHhhCCC
Confidence 9999976543
No 422
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.3e-34 Score=337.89 Aligned_cols=202 Identities=25% Similarity=0.374 Sum_probs=167.5
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|+++.|.. ..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~i~i~~l~k~~~~------~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~ 79 (306)
T PRK13537 6 APIDFRNVEKRYGD------KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHAR 79 (306)
T ss_pred ceEEEEeEEEEECC------eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHH
Confidence 46899999999852 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCCCCC-CCHHHHhcc-CCC--CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHH
Q 000503 673 -SIAYVPQVPWILS-GTIRDNILF-GKN--YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~-~ti~~nI~~-g~~--~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRva 743 (1459)
.||||||+|.++. .|++||+.+ +.. .+. ++..++++.+++.... .....+||||||||++
T Consensus 80 ~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 148 (306)
T PRK13537 80 QRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKA-----------DAKVGELSGGMKRRLT 148 (306)
T ss_pred hcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHh-----------cCchhhCCHHHHHHHH
Confidence 4999999999885 599999985 321 122 2334455555543221 2234589999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000503 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
||||+.++|++++|||||++||+...+.+++. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 149 LARALVNDPDVLVLDEPTTGLDPQARHLMWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999988876 43322347899999999999875 99999999999999999999865
Q ss_pred c
Q 000503 823 S 823 (1459)
Q Consensus 823 ~ 823 (1459)
.
T Consensus 228 ~ 228 (306)
T PRK13537 228 S 228 (306)
T ss_pred c
Confidence 4
No 423
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.5e-34 Score=361.43 Aligned_cols=211 Identities=19% Similarity=0.264 Sum_probs=179.7
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|+++++
T Consensus 4 l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~ 81 (490)
T PRK10938 4 LQISQGTFRLSD--TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSD 81 (490)
T ss_pred EEEEeEEEEcCC--eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhce
Confidence 899999999964 359999999999999999999999999999999999999999999999998877777778888999
Q ss_pred EeCCCcC--C-------CccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000503 1303 VPQSPFL--F-------EGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1459)
Q Consensus 1303 VpQdp~l--f-------~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1459)
+||+|.+ + .-|+++|+.... ..++++.++++ .+|++.........||||||||++|||||+
T Consensus 82 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~---------~~~l~~~~~~~~~~LSgG~~qrv~la~al~ 151 (490)
T PRK10938 82 EWQRNNTDMLSPGEDDTGRTTAEIIQDEV-KDPARCEQLAQ---------QFGITALLDRRFKYLSTGETRKTLLCQALM 151 (490)
T ss_pred eccCcchhhcccchhhccccHHHhcccch-hHHHHHHHHHH---------HcCCHhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 9999753 2 348888875421 11223333444 345554455556689999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000503 1374 KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1445 (1459)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~ 1445 (1459)
++|++|||||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|++++++++
T Consensus 152 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 225 (490)
T PRK10938 152 SEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQ 225 (490)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcc
Confidence 9999999999999999999999999998764 47899999999999877 899999999999999999998764
No 424
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.7e-35 Score=334.15 Aligned_cols=186 Identities=30% Similarity=0.426 Sum_probs=156.5
Q ss_pred cceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------------cEEEEcCCCCCCC-C
Q 000503 625 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILS-G 686 (1459)
Q Consensus 625 ~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------------~i~y~~Q~~~l~~-~ 686 (1459)
.+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.++. .
T Consensus 38 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 117 (269)
T cd03294 38 VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHR 117 (269)
T ss_pred eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCC
Confidence 359999999999999999999999999999999999999999998865 4899999999885 5
Q ss_pred CHHHHhccCCC---CC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcC
Q 000503 687 TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 759 (1459)
Q Consensus 687 ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe 759 (1459)
|++||+.++.. ++ +++..++++.+++...+.. ...+||||||||++||||++.+|+++||||
T Consensus 118 tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrv~lAral~~~p~illLDE 186 (269)
T cd03294 118 TVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHK-----------YPDELSGGMQQRVGLARALAVDPDILLMDE 186 (269)
T ss_pred cHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------CcccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999987521 22 2345566777776544433 335899999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000503 760 VLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 760 ~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
||++||+.+.+.+.+. +.... ..++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 187 Pt~~LD~~~~~~l~~~-l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 187 AFSALDPLIRREMQDE-LLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred CCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999988876 33211 237899999999998764 99999999999999999988754
No 425
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=332.97 Aligned_cols=200 Identities=27% Similarity=0.413 Sum_probs=166.3
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|++++|+.. .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (274)
T PRK13644 2 IRLENVSYSYPDG-----TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIR 76 (274)
T ss_pred EEEEEEEEEcCCC-----CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHH
Confidence 5788999998521 2359999999999999999999999999999999999999999998865
Q ss_pred -cEEEEcCCCC--CCCCCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHH
Q 000503 673 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1459)
Q Consensus 673 -~i~y~~Q~~~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRv 742 (1459)
.++|++|+|. +++.|++|||.++.. .++ ++..++++.++++.. .......||||||||+
T Consensus 77 ~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrv 145 (274)
T PRK13644 77 KLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKY-----------RHRSPKTLSGGQGQCV 145 (274)
T ss_pred hheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHH-----------hcCCcccCCHHHHHHH
Confidence 3899999986 567899999987632 222 234455565555433 2344568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000503 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 743 alARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
+||||++.+|+++||||||++||+.+.+.+++. +.....+|.|+|++||+++.++.||+|++|++|++++.|+.+++..
T Consensus 146 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 146 ALAGILTMEPECLIFDEVTSMLDPDSGIAVLER-IKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999998888876 3321234789999999999998899999999999999999888753
No 426
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.6e-34 Score=320.34 Aligned_cols=191 Identities=24% Similarity=0.330 Sum_probs=160.8
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------cEE
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SIA 675 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i~ 675 (1459)
+++|+++.|+. .++|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++| .++
T Consensus 2 ~~~~l~~~~~~------~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~ 75 (208)
T cd03268 2 KTNDLTKTYGK------KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIG 75 (208)
T ss_pred EEEEEEEEECC------eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEE
Confidence 57889998842 2359999999999999999999999999999999999999999999876 389
Q ss_pred EEcCCCCCC-CCCHHHHhccCC---CCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccC
Q 000503 676 YVPQVPWIL-SGTIRDNILFGK---NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 751 (1459)
Q Consensus 676 y~~Q~~~l~-~~ti~~nI~~g~---~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 751 (1459)
||+|++.++ +.|++||+.++. ..++++.+++++..+++.... .....|||||||||+||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAK-----------KKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHh-----------hhHhhCCHHHHHHHHHHHHHhcC
Confidence 999999877 469999997653 234556667777777654332 34568999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 752 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 752 ~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELREL-ILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999988775 33212357899999999999875 9999999999998754
No 427
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=368.85 Aligned_cols=217 Identities=24% Similarity=0.361 Sum_probs=189.0
Q ss_pred cEEEEEEEEEecCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHH---
Q 000503 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL--- 1296 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l--- 1296 (1459)
.++++|++++|+.+ .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+.+++
T Consensus 4 ~l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 83 (648)
T PRK10535 4 LLELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQL 83 (648)
T ss_pred EEEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHH
Confidence 48999999999642 2469999999999999999999999999999999999999999999999999999887664
Q ss_pred -hcccEEEeCCCcCCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000503 1297 -RGRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1459)
Q Consensus 1297 -R~~i~~VpQdp~lf~g-TIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1459)
|++++|+||+|.+|++ |+.||++... ..+.++ .+....+.++.+|++..++.....||+||+||++||||
T Consensus 84 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~-----~~~~~~~~l~~lgl~~~~~~~~~~LS~Gq~qrv~LAra 158 (648)
T PRK10535 84 RREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQ-----RLLRAQELLQRLGLEDRVEYQPSQLSGGQQQRVSIARA 158 (648)
T ss_pred HhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHH-----HHHHHHHHHHHCCChhhhcCCcccCCHHHHHHHHHHHH
Confidence 6789999999999975 9999997421 111111 12233455666688887888888999999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCeEEEecChhHHh
Q 000503 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
|+++|++|||||||++||.++.+.+.+.|++.. +++|+|+|+|+++.+..|||+++|++|++++.|+++|..
T Consensus 159 L~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (648)
T PRK10535 159 LMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAQEKV 231 (648)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHHHHHhCCEEEEEECCEEEeecCccccc
Confidence 999999999999999999999999999998764 489999999999999889999999999999999999886
No 428
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-34 Score=328.22 Aligned_cols=197 Identities=26% Similarity=0.379 Sum_probs=161.5
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1459)
+++|+++.|..+ .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (241)
T cd03256 2 EVENLSKTYPNG-----KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQL 76 (241)
T ss_pred EEeeEEEecCCc-----cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHH
Confidence 578888888531 2359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCC-CCHHHHhccCCC------------CC---HHHHHHHHHHhcchhhHhhccCCCcccccCCCccc
Q 000503 673 --SIAYVPQVPWILS-GTIRDNILFGKN------------YD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 734 (1459)
Q Consensus 673 --~i~y~~Q~~~l~~-~ti~~nI~~g~~------------~~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~L 734 (1459)
.++|++|++.++. .|++||+.++.. .+ .++..++++..++.. .....+.+|
T Consensus 77 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~L 145 (241)
T cd03256 77 RRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQL 145 (241)
T ss_pred HhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccC
Confidence 3899999998876 699999986531 11 122333444444432 234566799
Q ss_pred CcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEE
Q 000503 735 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVK 812 (1459)
Q Consensus 735 SGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~ 812 (1459)
||||||||+||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||++++|++|+++
T Consensus 146 S~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~ 224 (241)
T cd03256 146 SGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDL-LKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIV 224 (241)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999988876 333122 3789999999999988 59999999999999
Q ss_pred EecCHHHH
Q 000503 813 WIGSSADL 820 (1459)
Q Consensus 813 ~~g~~~~l 820 (1459)
+.|+++++
T Consensus 225 ~~~~~~~~ 232 (241)
T cd03256 225 FDGPPAEL 232 (241)
T ss_pred eecCHHHh
Confidence 99998876
No 429
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.5e-34 Score=360.39 Aligned_cols=214 Identities=24% Similarity=0.369 Sum_probs=178.5
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCC--CCceEEECCEeCCCCChHH-Hhcc
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRD-LRGR 1299 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~--~~G~I~IDG~di~~i~~~~-lR~~ 1299 (1459)
|+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999963 3699999999999999999999999999999999999987 7999999999998877554 4678
Q ss_pred cEEEeCCCcCCCc-cHHHhcCcCCC-------CChHHHHHHHHHhcHHHHHHhCCCchhh-hcCCCCCChhHHHHHHHHH
Q 000503 1300 FAVVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGISFSVGQRQLICLAR 1370 (1459)
Q Consensus 1300 i~~VpQdp~lf~g-TIReNLdp~~~-------~~d~ei~~aL~~~~l~~~i~~lGLdt~v-~e~G~~LSgGQrQrl~LAR 1370 (1459)
++||||+|.+|+. |+++|+..... ...++.. ....+.++.+|++... ......||||||||++|||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~ 154 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMY-----LRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAK 154 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHH-----HHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHH
Confidence 9999999988875 99999965321 1111111 1233445555665432 2334579999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHh
Q 000503 1371 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1443 (1459)
Q Consensus 1371 ALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl 1443 (1459)
||+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (500)
T TIGR02633 155 ALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS 229 (500)
T ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC
Confidence 9999999999999999999999999999998753 47899999999999976 8999999999999999887653
No 430
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-34 Score=325.87 Aligned_cols=214 Identities=21% Similarity=0.247 Sum_probs=174.8
Q ss_pred cEEEEEEEEEecCC------------------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEE
Q 000503 1222 LIEFQNVTMRYKPS------------------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV 1283 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~------------------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~I 1283 (1459)
.|+++||+..|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~ 83 (264)
T PRK13546 4 SVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDR 83 (264)
T ss_pred eEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEE
Confidence 47888888777541 235899999999999999999999999999999999999999999999
Q ss_pred CCEeCCCCChHHHhcccEEEeCCCcCCC-ccHHHhcCcC---CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCC
Q 000503 1284 DGLNIINTPVRDLRGRFAVVPQSPFLFE-GSLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFS 1359 (1459)
Q Consensus 1284 DG~di~~i~~~~lR~~i~~VpQdp~lf~-gTIReNLdp~---~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LS 1359 (1459)
||. +++++|++.+++ .|+++|+... ...+.++..+.. .+.++..+++..+......||
T Consensus 84 ~g~-------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~~~~LS 145 (264)
T PRK13546 84 NGE-------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMT-----PKIIEFSELGEFIYQPVKKYS 145 (264)
T ss_pred CCE-------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHcCCchhhcCCcccCC
Confidence 994 456788887664 5999998642 122333332221 222333367776777778899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1360 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1360 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
+|||||++||||++++|+||||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~~~g 225 (264)
T PRK13546 146 SGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLKDYG 225 (264)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999987753 48899999999999876 8999999999999999
Q ss_pred ChhHHhccCCcHHHHH
Q 000503 1438 NPQTLLQDECSVFSSF 1453 (1459)
Q Consensus 1438 ~p~eLl~~~~~~f~~l 1453 (1459)
++++++++....|+..
T Consensus 226 ~~~~~~~~~~~~~~~~ 241 (264)
T PRK13546 226 ELDDVLPKYEAFLNDF 241 (264)
T ss_pred CHHHHHHHhHHHHHHH
Confidence 9999998665444433
No 431
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.6e-34 Score=323.29 Aligned_cols=197 Identities=26% Similarity=0.439 Sum_probs=163.4
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------cE
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------SI 674 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~i 674 (1459)
+++|+++.|... . +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 2 ~~~~l~~~~~~~-~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i 77 (220)
T cd03263 2 QIRNLTKTYKKG-T---KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSL 77 (220)
T ss_pred EEEeeEEEeCCC-C---ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhE
Confidence 578888888532 1 2359999999999999999999999999999999999999999998876 38
Q ss_pred EEEcCCCCCC-CCCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHH
Q 000503 675 AYVPQVPWIL-SGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 746 (1459)
Q Consensus 675 ~y~~Q~~~l~-~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalAR 746 (1459)
+|++|++.++ +.|++||+.++.. .++ ++..++++.+++.... .....+||||||||++|||
T Consensus 78 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~ 146 (220)
T cd03263 78 GYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-----------NKRARTLSGGMKRKLSLAI 146 (220)
T ss_pred EEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hChhhhCCHHHHHHHHHHH
Confidence 9999999888 5699999986421 222 3455666666664322 2344689999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000503 747 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 747 aly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 820 (1459)
|++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 147 al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 147 ALIGGPSVLLLDEPTSGLDPASRRAIWDL-ILE-VRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHhcCCCEEEECCCCCCCCHHHHHHHHHH-HHH-HhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999988875 333 3346899999999999875 999999999999999988764
No 432
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=329.14 Aligned_cols=206 Identities=25% Similarity=0.329 Sum_probs=170.2
Q ss_pred CCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC----
Q 000503 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---- 672 (1459)
Q Consensus 602 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~---- 672 (1459)
+...++++|+++.|.. . ++|+|+||+|++|++++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 10 ~~~~l~~~~l~~~~~~---~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~ 83 (260)
T PRK10744 10 APSKIQVRNLNFYYGK---F---HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENIL 83 (260)
T ss_pred CCceEEEEEEEEEeCC---e---EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcc
Confidence 3456889999999853 2 35999999999999999999999999999999999986 5899998764
Q ss_pred -----------cEEEEcCCCCCCCCCHHHHhccCCC----CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcc
Q 000503 673 -----------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1459)
Q Consensus 673 -----------~i~y~~Q~~~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~ 733 (1459)
.++|++|+|.++..|++||+.++.. +++ ++..++++..++..++. ...+....+
T Consensus 84 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 156 (260)
T PRK10744 84 TPKQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYS 156 (260)
T ss_pred ccccchHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCC
Confidence 4899999999988999999987532 232 23445566666543332 234567789
Q ss_pred cCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEE
Q 000503 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 812 (1459)
Q Consensus 734 LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~ 812 (1459)
||||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|+++
T Consensus 157 LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 234 (260)
T PRK10744 157 LSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEEL-ITE-LKQDYTVVIVTHNMQQAARCSDYTAFMYLGELI 234 (260)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999988776 333 3346899999999999864 9999999999999
Q ss_pred EecCHHHHHh
Q 000503 813 WIGSSADLAV 822 (1459)
Q Consensus 813 ~~g~~~~l~~ 822 (1459)
+.|+.+++..
T Consensus 235 ~~g~~~~~~~ 244 (260)
T PRK10744 235 EFGNTDTIFT 244 (260)
T ss_pred EeCCHHHHHh
Confidence 9999888753
No 433
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.2e-34 Score=323.95 Aligned_cols=191 Identities=26% Similarity=0.369 Sum_probs=156.0
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1459)
+++|+++.|+.... .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~~~--~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (218)
T cd03255 2 ELKNLSKTYGGGGE--KVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAF 79 (218)
T ss_pred eEeeeEEEecCCCc--ceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHH
Confidence 57888998853210 12469999999999999999999999999999999999999999998754
Q ss_pred ---cEEEEcCCCCCCCC-CHHHHhccCCCC---C----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 ---SIAYVPQVPWILSG-TIRDNILFGKNY---D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~~-ti~~nI~~g~~~---~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
.++|++|+|.++.. |++||+.++..+ + +++..++++..+++.. ......+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 148 (218)
T cd03255 80 RRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDR-----------LNHYPSELSGGQQQR 148 (218)
T ss_pred HhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhcChhhcCHHHHHH
Confidence 38999999998876 999999875422 1 2344555665555432 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeE
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQV 811 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~~d~i~~l~~G~i 811 (1459)
|+||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+..||++++|++|++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 149 VAIARALANDPKIILADEPTGNLDSETGKEVMEL-LRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 9999999999999999999999999998888776 333122 37899999999998888999999999974
No 434
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=324.85 Aligned_cols=198 Identities=25% Similarity=0.341 Sum_probs=162.5
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|+.... ..++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~--~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 82 (233)
T PRK11629 5 LLQCDNLCKRYQEGSV--QTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKA 82 (233)
T ss_pred eEEEEeEEEEcCCCCc--ceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHH
Confidence 4789999999964211 12469999999999999999999999999999999999999999998875
Q ss_pred -----cEEEEcCCCCCCCC-CHHHHhccCC---CCCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHH
Q 000503 673 -----SIAYVPQVPWILSG-TIRDNILFGK---NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1459)
Q Consensus 673 -----~i~y~~Q~~~l~~~-ti~~nI~~g~---~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 739 (1459)
.++|++|+|.++.. |++||+.++. ..++ ++..++++.+++... ......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~ 151 (233)
T PRK11629 83 ELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGER 151 (233)
T ss_pred HHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHH
Confidence 38999999988865 9999998642 1222 234555666655432 2345568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecC
Q 000503 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1459)
Q Consensus 740 qRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~ 816 (1459)
||++||||++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+..+|++++|++|++++.|+
T Consensus 152 qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 152 QRVAIARALVNNPRLVLADEPTGNLDARNADSIFQL-LGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999888775 33211 24789999999999998889999999999998765
No 435
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.3e-34 Score=325.28 Aligned_cols=199 Identities=25% Similarity=0.375 Sum_probs=164.1
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------c
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 673 (1459)
++++|+++.|+. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~ 75 (236)
T TIGR03864 2 LEVAGLSFAYGA------RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALAR 75 (236)
T ss_pred EEEEeeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhh
Confidence 568899998852 2359999999999999999999999999999999999999999998876 3
Q ss_pred EEEEcCCCCC-CCCCHHHHhccCCC---CCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 674 IAYVPQVPWI-LSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 674 i~y~~Q~~~l-~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
++|++|++.+ ++.|++||+.++.. .+++ +..+.++..++. ...+....+||||||||++||
T Consensus 76 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrl~la 144 (236)
T TIGR03864 76 LGVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLA-----------ERADDKVRELNGGHRRRVEIA 144 (236)
T ss_pred EEEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhcCChhhCCHHHHHHHHHH
Confidence 8999999987 46799999986532 2222 223334443332 224556679999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHHh
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
||++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 145 ral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 145 RALLHRPALLLLDEPTVGLDPASRAAIVAH-VRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHH
Confidence 999999999999999999999999988876 33212 24789999999999998899999999999999999888754
No 436
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.1e-34 Score=322.84 Aligned_cols=198 Identities=27% Similarity=0.415 Sum_probs=160.8
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1459)
+++|+++.|.. . ++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (222)
T cd03224 2 EVENLNAGYGK---S---QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARA 75 (222)
T ss_pred EEeeEEeecCC---e---eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhc
Confidence 57888888752 2 359999999999999999999999999999999999999999998865
Q ss_pred cEEEEcCCCCCCCC-CHHHHhccCCCCC--H---HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHH
Q 000503 673 SIAYVPQVPWILSG-TIRDNILFGKNYD--P---QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 746 (1459)
Q Consensus 673 ~i~y~~Q~~~l~~~-ti~~nI~~g~~~~--~---~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalAR 746 (1459)
.++|++|++.++.. |++||+.++.... . ++..++++... .+ ......+..+||||||||++|||
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~------~l----~~~~~~~~~~LS~G~~qrv~lar 145 (222)
T cd03224 76 GIGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP------RL----KERRKQLAGTLSGGEQQMLAIAR 145 (222)
T ss_pred CeEEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH------hh----hhhhhCchhhCCHHHHHHHHHHH
Confidence 38999999998876 9999998764321 1 12223333321 11 11234567799999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHH
Q 000503 747 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1459)
Q Consensus 747 aly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 821 (1459)
|+..+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 146 al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 146 ALMSRPKLLLLDEPSEGLAPKIVEEIFEA-IRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHhcCCCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 99999999999999999999999988876 33312257899999999998765 9999999999999999887764
No 437
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-34 Score=324.80 Aligned_cols=202 Identities=28% Similarity=0.402 Sum_probs=164.2
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|+++.|..... ..++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~~~~l~~~~~~~~~--~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (233)
T cd03258 2 IELKNVSKVFGDTGG--KVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRK 79 (233)
T ss_pred eEEecceEEccCCCC--ceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHH
Confidence 578899999863210 01469999999999999999999999999999999999999999998764
Q ss_pred ---cEEEEcCCCCCCC-CCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
.++|++|+|.++. .|++||+.++.. .+. ++..+.++..++... ......+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 148 (233)
T cd03258 80 ARRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDK-----------ADAYPAQLSGGQKQR 148 (233)
T ss_pred HHhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhcChhhCCHHHHHH
Confidence 3899999999986 599999987532 222 233444555554332 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1459)
++||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (233)
T cd03258 149 VGIARALANNPKVLLCDEATSALDPETTQSILAL-LRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEE 227 (233)
T ss_pred HHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 9999999999999999999999999999888776 332122 37899999999999865 99999999999999999887
Q ss_pred HH
Q 000503 820 LA 821 (1459)
Q Consensus 820 l~ 821 (1459)
+.
T Consensus 228 ~~ 229 (233)
T cd03258 228 VF 229 (233)
T ss_pred Hh
Confidence 64
No 438
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=326.12 Aligned_cols=197 Identities=29% Similarity=0.364 Sum_probs=164.5
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------cEE
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIA 675 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~ 675 (1459)
..++++|+++.|.. .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 11 ~~l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~ 84 (257)
T PRK11247 11 TPLLLNAVSKRYGE------RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTR 84 (257)
T ss_pred CcEEEEEEEEEECC------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceE
Confidence 45899999999852 2359999999999999999999999999999999999999999998876 489
Q ss_pred EEcCCCCCCC-CCHHHHhccCCCC-CHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCC
Q 000503 676 YVPQVPWILS-GTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSD 753 (1459)
Q Consensus 676 y~~Q~~~l~~-~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~ 753 (1459)
|++|+|.++. .|++||+.++... .+++..++++..++... ......+||||||||++||||++.+|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADR-----------ANEWPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999998886 6999999876321 23455566666666433 234557999999999999999999999
Q ss_pred EEEEcCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000503 754 IYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1459)
Q Consensus 754 illlDe~~s~lD~~~~~~i~~~~~~~~-~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~ 818 (1459)
++||||||++||+.+.+.+.+. +... ...++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDL-IESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999888775 3321 123789999999999876 49999999999999877643
No 439
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.7e-34 Score=321.40 Aligned_cols=188 Identities=32% Similarity=0.437 Sum_probs=154.4
Q ss_pred EEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------cEEEEcC
Q 000503 608 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAYVPQ 679 (1459)
Q Consensus 608 ~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~y~~Q 679 (1459)
++|+++.|+. .++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|
T Consensus 2 ~~~l~~~~~~------~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q 75 (213)
T cd03235 2 VEDLTVSYGG------HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQ 75 (213)
T ss_pred cccceeEECC------EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEecc
Confidence 4677787742 2359999999999999999999999999999999999999999999987 3999999
Q ss_pred CCCC---CCCCHHHHhccCCCC-----------CHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 680 VPWI---LSGTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 680 ~~~l---~~~ti~~nI~~g~~~-----------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
+|.+ ++.|++||+.++... ++++.+++++.++++..+. ....+||||||||++||
T Consensus 76 ~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la 144 (213)
T cd03235 76 RRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRVLLA 144 (213)
T ss_pred ccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHHHH
Confidence 9976 557999999875321 1234566677777654333 24458999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1459)
||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++| +++.
T Consensus 145 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~ 212 (213)
T cd03235 145 RALVQDPDLLLLDEPFAGVDPKTQEDIYEL-LRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVAS 212 (213)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-Eeec
Confidence 999999999999999999999999988876 33212257899999999999865 9999999886 5443
No 440
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.7e-34 Score=321.42 Aligned_cols=191 Identities=30% Similarity=0.422 Sum_probs=157.1
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------cEE
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SIA 675 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i~ 675 (1459)
+++|+++.|+. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 2 ~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~ 75 (213)
T cd03301 2 ELENVTKRFGN---V---TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIA 75 (213)
T ss_pred EEEeeEEEECC---e---eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEE
Confidence 57888888853 2 359999999999999999999999999999999999999999999875 389
Q ss_pred EEcCCCCCCC-CCHHHHhccCCC---CCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHH
Q 000503 676 YVPQVPWILS-GTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 747 (1459)
Q Consensus 676 y~~Q~~~l~~-~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARa 747 (1459)
|++|++.++. .|++||+.++.. .+++ +..+.++..+++.. ......+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHL-----------LDRKPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-----------HhCChhhCCHHHHHHHHHHHH
Confidence 9999999885 599999987522 2222 33444555555432 234456899999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 748 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 748 ly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
++.+|++++|||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAE-LKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999988876 332122 37899999999998775 9999999999998765
No 441
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=2.8e-34 Score=322.21 Aligned_cols=201 Identities=22% Similarity=0.319 Sum_probs=163.0
Q ss_pred EEEEEEEEEecC----C-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEEC--C--EeCCCCCh
Q 000503 1223 IEFQNVTMRYKP----S-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD--G--LNIINTPV 1293 (1459)
Q Consensus 1223 I~f~nVs~~Y~~----~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~ID--G--~di~~i~~ 1293 (1459)
|+++|++++|+. + ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+| | +++...+.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 789999999963 1 2469999999999999999999999999999999999999999999998 4 37766665
Q ss_pred HH---H-hcccEEEeCCCcCCCc-cHHHhcCcC---CCCChHHHHHHHHHhcHHHHHHhCCCchh-hhcCCCCCChhHHH
Q 000503 1294 RD---L-RGRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQ 1364 (1459)
Q Consensus 1294 ~~---l-R~~i~~VpQdp~lf~g-TIReNLdp~---~~~~d~ei~~aL~~~~l~~~i~~lGLdt~-v~e~G~~LSgGQrQ 1364 (1459)
.. + +++++|+||+|.+|+. |++||+... .....++.. ....+.++.+|++.. ....+.+||+||||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LS~G~~q 156 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAAR-----ARARELLARLNIPERLWHLPPATFSGGEQQ 156 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCCchhhhhCCcccCCHHHHH
Confidence 43 3 4679999999988875 999998642 111111111 122344455566543 34566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEE
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILIL 1428 (1459)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlVl 1428 (1459)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+. .||||+.+
T Consensus 157 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 157 RVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 9999999999999999999999999999999999998764 4789999999999886 48999876
No 442
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.2e-34 Score=335.34 Aligned_cols=202 Identities=26% Similarity=0.392 Sum_probs=166.2
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|+++.|.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~~i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 76 (303)
T TIGR01288 3 VAIDLVGVSKSYGD------KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLAR 76 (303)
T ss_pred cEEEEEeEEEEeCC------eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHh
Confidence 45889999999852 2359999999999999999999999999999999999999999999865
Q ss_pred -cEEEEcCCCCCCC-CCHHHHhcc-CC--CCCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHH
Q 000503 673 -SIAYVPQVPWILS-GTIRDNILF-GK--NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~-~ti~~nI~~-g~--~~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRva 743 (1459)
.+||++|++.++. .|++||+.+ +. ..+.+ +.+++++.+++... ......+||||||||++
T Consensus 77 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-----------~~~~~~~LSgG~~qrv~ 145 (303)
T TIGR01288 77 VAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADVRVALLSGGMKRRLT 145 (303)
T ss_pred hcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-----------hcCchhhCCHHHHHHHH
Confidence 4999999998885 599999974 22 12322 23344444444322 23345689999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHh
Q 000503 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1459)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 822 (1459)
||||++.+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 146 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 146 LARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999988876 33312357899999999999875 99999999999999999999864
Q ss_pred c
Q 000503 823 S 823 (1459)
Q Consensus 823 ~ 823 (1459)
.
T Consensus 225 ~ 225 (303)
T TIGR01288 225 E 225 (303)
T ss_pred h
Confidence 3
No 443
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.8e-34 Score=343.08 Aligned_cols=200 Identities=26% Similarity=0.402 Sum_probs=167.7
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|++++|.. +.+|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.++|
T Consensus 3 ~L~~~nls~~y~~------~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~ 76 (402)
T PRK09536 3 MIDVSDLSVEFGD------TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAAS 76 (402)
T ss_pred eEEEeeEEEEECC------EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHh
Confidence 4788999999852 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCCC-CCCCHHHHhccCCC-----C------CHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHH
Q 000503 673 -SIAYVPQVPWI-LSGTIRDNILFGKN-----Y------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1459)
Q Consensus 673 -~i~y~~Q~~~l-~~~ti~~nI~~g~~-----~------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 739 (1459)
.+|||+|++.+ ++.|++||+.++.. + +.++.+++++..++.+.. .....+||||||
T Consensus 77 ~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~-----------~~~~~~LSgGer 145 (402)
T PRK09536 77 RRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFA-----------DRPVTSLSGGER 145 (402)
T ss_pred cceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHH
Confidence 48999999987 56799999988641 1 123455566666654322 234568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000503 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1459)
Q Consensus 740 qRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~ 818 (1459)
||++|||||+++|+++||||||++||+.+...+++. +.....+++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 146 QRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~l-L~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ 224 (402)
T PRK09536 146 QRVLLARALAQATPVLLLDEPTASLDINHQVRTLEL-VRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPA 224 (402)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHH
Confidence 999999999999999999999999999998888765 3321224789999999999986 59999999999999999999
Q ss_pred HHHh
Q 000503 819 DLAV 822 (1459)
Q Consensus 819 ~l~~ 822 (1459)
++..
T Consensus 225 ev~~ 228 (402)
T PRK09536 225 DVLT 228 (402)
T ss_pred HHhC
Confidence 8754
No 444
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=328.58 Aligned_cols=207 Identities=26% Similarity=0.331 Sum_probs=172.1
Q ss_pred CCCceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC---
Q 000503 601 SKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG--- 672 (1459)
Q Consensus 601 ~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~--- 672 (1459)
.....++++|+++.|+. +++|+|+||++++||+++|+||||||||||+++|.|+++ |++|+|.++|
T Consensus 16 ~~~~~l~~~nl~~~~~~------~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~ 89 (267)
T PRK14237 16 EEEIALSTKDLHVYYGK------KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDI 89 (267)
T ss_pred CCCeEEEEeeEEEEECC------eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEc
Confidence 34457899999999852 235999999999999999999999999999999999986 5899998765
Q ss_pred ------------cEEEEcCCCCCCCCCHHHHhccCCC----CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCc
Q 000503 673 ------------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1459)
Q Consensus 673 ------------~i~y~~Q~~~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 732 (1459)
.++|++|++.++..|++|||.++.. .++ ++..++++.+++..++. +..+..+.
T Consensus 90 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~ 162 (267)
T PRK14237 90 NRKEINVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSAL 162 (267)
T ss_pred ccccCChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcc
Confidence 3899999999998999999987532 122 33455666666654432 23456778
Q ss_pred ccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeE
Q 000503 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQV 811 (1459)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i 811 (1459)
+||||||||++||||++.+|++++|||||++||+.+.+++.+. +.. +.++.|+|++||+++.+. .||++++|++|++
T Consensus 163 ~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i 240 (267)
T PRK14237 163 TLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEET-MFE-LKKNYTIIIVTHNMQQAARASDYTAFFYLGDL 240 (267)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999998888775 333 345689999999999886 4999999999999
Q ss_pred EEecCHHHHHh
Q 000503 812 KWIGSSADLAV 822 (1459)
Q Consensus 812 ~~~g~~~~l~~ 822 (1459)
++.|+++++..
T Consensus 241 ~~~g~~~~~~~ 251 (267)
T PRK14237 241 IEYDKTRNIFT 251 (267)
T ss_pred EEeCCHHHHhc
Confidence 99999988753
No 445
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-34 Score=328.78 Aligned_cols=204 Identities=23% Similarity=0.345 Sum_probs=169.2
Q ss_pred CceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC-----
Q 000503 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG----- 672 (1459)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~----- 672 (1459)
+..++++|+++.|.. . ++|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 17 ~~~l~~~nl~~~~~~---~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~ 90 (267)
T PRK14235 17 EIKMRARDVSVFYGE---K---QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYD 90 (267)
T ss_pred CceEEEEeEEEEECC---E---EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcc
Confidence 457899999999852 2 359999999999999999999999999999999999975 899998765
Q ss_pred ----------cEEEEcCCCCCCCCCHHHHhccCCC---C--C----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcc
Q 000503 673 ----------SIAYVPQVPWILSGTIRDNILFGKN---Y--D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1459)
Q Consensus 673 ----------~i~y~~Q~~~l~~~ti~~nI~~g~~---~--~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~ 733 (1459)
.++|++|+|.+++.|++||+.++.. . + .++..++++.+++..++. +..+..+.+
T Consensus 91 ~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 163 (267)
T PRK14235 91 PRLDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTG 163 (267)
T ss_pred cccchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCccc
Confidence 3899999999998899999987531 1 1 123455666666643322 123456779
Q ss_pred cCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEE
Q 000503 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 812 (1459)
Q Consensus 734 LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~ 812 (1459)
||||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|+++
T Consensus 164 LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~ 241 (267)
T PRK14235 164 LSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEEL-IDE-LRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLV 241 (267)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHH-HHH-HhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999998888775 433 3346899999999999865 9999999999999
Q ss_pred EecCHHHHH
Q 000503 813 WIGSSADLA 821 (1459)
Q Consensus 813 ~~g~~~~l~ 821 (1459)
+.|+++++.
T Consensus 242 ~~g~~~~~~ 250 (267)
T PRK14235 242 EVGDTEKMF 250 (267)
T ss_pred EeCCHHHHH
Confidence 999988875
No 446
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.5e-34 Score=316.95 Aligned_cols=193 Identities=22% Similarity=0.309 Sum_probs=162.2
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .. .|+++++
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~~-~~~~~~~ 77 (207)
T PRK13539 3 LEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--PD-VAEACHY 77 (207)
T ss_pred EEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--hh-hHhhcEE
Confidence 789999999964 359999999999999999999999999999999999999999999999998753 22 7889999
Q ss_pred EeCCCcCC-CccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLF-EGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf-~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
++|++.++ ..|+++|+..... ..++++.++++..++. .........||||||||++||||++++|++
T Consensus 78 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~---------~~~~~~~~~LS~G~~qrl~la~al~~~p~l 148 (207)
T PRK13539 78 LGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLA---------PLAHLPFGYLSAGQKRRVALARLLVSNRPI 148 (207)
T ss_pred ecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCH---------HHHcCChhhcCHHHHHHHHHHHHHhcCCCE
Confidence 99988775 5799999864321 2233455555555443 333334457999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhHhhcCEEEEEeC
Q 000503 1379 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILILDH 1430 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~-~~~~TvI~IaHrl~ti~~~DrIlVl~~ 1430 (1459)
|||||||++||..+.+.+.+.|++. .+++|+|++||+++.+.. |+++.++.
T Consensus 149 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 149 WILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 9999999999999999999999875 358999999999999998 99988754
No 447
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-34 Score=320.44 Aligned_cols=190 Identities=24% Similarity=0.353 Sum_probs=157.6
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------c
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 673 (1459)
++++|+++.|.. . ++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~---~---~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 73 (211)
T cd03264 1 LQLENLTKRYGK---K---RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRR 73 (211)
T ss_pred CEEEEEEEEECC---E---EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhh
Confidence 357889998853 1 3599999999999 9999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCC-CHHHHhccCCC---CC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 674 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 674 i~y~~Q~~~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
++|++|+|.++.. |++||+.+... .+ +++.+++++.+++....+ ....+||||||||++||
T Consensus 74 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la 142 (211)
T cd03264 74 IGYLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIA 142 (211)
T ss_pred eEEecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHH
Confidence 8999999998875 99999986421 12 234455666666653322 34468999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
||++++|+++||||||++||+.+.+++.+. +.. ..+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 143 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 143 QALVGDPSILIVDEPTAGLDPEERIRFRNL-LSE-LGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999988876 333 3345899999999999864 9999999999998754
No 448
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-34 Score=330.24 Aligned_cols=206 Identities=24% Similarity=0.376 Sum_probs=170.5
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|++++|+...+...+++|+|+||+|++|++++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 47899999999643210113469999999999999999999999999999999999999999998875
Q ss_pred --cEEEEcCCCC--CCCCCHHHHhccCCC---CC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 --SIAYVPQVPW--ILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 --~i~y~~Q~~~--l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
.++|++|+|. +++.|+.||+.|+.. .+ +++.+++++.++|..... ....+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRR-----------HAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHH
Confidence 3899999985 666799999998632 22 234566677777765443 3346899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l 820 (1459)
++||||++.+|+++||||||++||+.+.+.+.+. +..... .+.|+|++||+++.+..||++++|++|++++.|+++++
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNT-IKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988775 333112 37899999999999888999999999999999999988
Q ss_pred Hh
Q 000503 821 AV 822 (1459)
Q Consensus 821 ~~ 822 (1459)
..
T Consensus 232 ~~ 233 (280)
T PRK13633 232 FK 233 (280)
T ss_pred hc
Confidence 54
No 449
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.8e-34 Score=324.07 Aligned_cols=197 Identities=26% Similarity=0.370 Sum_probs=161.6
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1459)
+++|+++.|+. +.+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 75 (232)
T cd03218 2 RAENLSKRYGK------RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARL 75 (232)
T ss_pred eEEEEEEEeCC------EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhc
Confidence 57888998852 2359999999999999999999999999999999999999999998865
Q ss_pred cEEEEcCCCCCCCC-CHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHH
Q 000503 673 SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 744 (1459)
Q Consensus 673 ~i~y~~Q~~~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRval 744 (1459)
.++|++|++.++.+ |++||+.++.+ .++ ++.++.++..++.. .......+||||||||++|
T Consensus 76 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~l 144 (232)
T cd03218 76 GIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITH-----------LRKSKASSLSGGERRRVEI 144 (232)
T ss_pred cEEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHHHH
Confidence 38999999988876 99999987532 121 12334444444432 2345667999999999999
Q ss_pred HHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHH
Q 000503 745 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1459)
Q Consensus 745 ARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 821 (1459)
|||+..+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 145 a~al~~~p~llllDEPt~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 145 ARALATNPKFLLLDEPFAGVDPIAVQDIQKI-IKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhh
Confidence 9999999999999999999999999888775 33212347899999999987765 9999999999999999887764
No 450
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.6e-34 Score=309.17 Aligned_cols=166 Identities=33% Similarity=0.550 Sum_probs=148.6
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------c
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 673 (1459)
++++|+++.|.... +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (178)
T cd03247 1 LSINNVSFSYPEQE----QQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSL 76 (178)
T ss_pred CEEEEEEEEeCCCC----ccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhh
Confidence 35789999986421 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCC
Q 000503 674 IAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSD 753 (1459)
Q Consensus 674 i~y~~Q~~~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~ 753 (1459)
++|++|+|++++.|++||| ..+||||||||++||||++.+|+
T Consensus 77 i~~~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~ 118 (178)
T cd03247 77 ISVLNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAP 118 (178)
T ss_pred EEEEccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCC
Confidence 8999999999999999998 45899999999999999999999
Q ss_pred EEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCCeEEEec
Q 000503 754 IYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 754 illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g 815 (1459)
++||||||++||+.+.+.+++. +.. +.+++|+|++||+.+.++.||++++|++|++++.|
T Consensus 119 ~lllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 119 IVLLDEPTVGLDPITERQLLSL-IFE-VLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEEECCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999888876 333 34578999999999999889999999999998654
No 451
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-34 Score=331.08 Aligned_cols=201 Identities=23% Similarity=0.361 Sum_probs=168.2
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|+.+ .++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~-----~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~ 79 (283)
T PRK13636 5 ILKVEELNYNYSDG-----THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMK 79 (283)
T ss_pred eEEEEeEEEEeCCC-----CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHH
Confidence 58899999999521 2359999999999999999999999999999999999999999998875
Q ss_pred ---cEEEEcCCC--CCCCCCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHH
Q 000503 673 ---SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1459)
Q Consensus 673 ---~i~y~~Q~~--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkq 740 (1459)
.++|++|+| .+++.|++|||.++.. +.. ++..++++.++|... ......+|||||||
T Consensus 80 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~q 148 (283)
T PRK13636 80 LRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFGQKK 148 (283)
T ss_pred HHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHHHHH
Confidence 389999998 5778899999987531 221 344556666666432 23567799999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHH
Q 000503 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1459)
Q Consensus 741 RvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~ 818 (1459)
|++|||||+.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 149 rl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~ 227 (283)
T PRK13636 149 RVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKL-LVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPK 227 (283)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999888775 332122 2789999999999987 59999999999999999998
Q ss_pred HHHh
Q 000503 819 DLAV 822 (1459)
Q Consensus 819 ~l~~ 822 (1459)
++..
T Consensus 228 ~~~~ 231 (283)
T PRK13636 228 EVFA 231 (283)
T ss_pred HHhc
Confidence 8754
No 452
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-34 Score=331.13 Aligned_cols=203 Identities=28% Similarity=0.385 Sum_probs=169.1
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC---eEEEEcC--------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH---GSIHASG-------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~---G~i~~~~-------- 672 (1459)
..++++|+++.|+.. . .++++|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|
T Consensus 4 ~~l~i~~l~~~~~~~-~---~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~ 79 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-K---KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTV 79 (282)
T ss_pred ceEEEEEEEEEcCCC-C---ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCH
Confidence 458899999999632 1 235999999999999999999999999999999999999988 8998865
Q ss_pred -----cEEEEcCCCC--CCCCCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHH
Q 000503 673 -----SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1459)
Q Consensus 673 -----~i~y~~Q~~~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 738 (1459)
.++||+|+|+ +++.|++|||.++.. .++ ++..++++.++++.... ....+|||||
T Consensus 80 ~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LS~G~ 148 (282)
T PRK13640 80 WDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYID-----------SEPANLSGGQ 148 (282)
T ss_pred HHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHH
Confidence 4899999995 567899999987632 233 23455666676654333 3446999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCH
Q 000503 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSS 817 (1459)
Q Consensus 739 kqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~ 817 (1459)
|||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+..||++++|++|++++.|++
T Consensus 149 ~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~ 227 (282)
T PRK13640 149 KQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKL-IRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSP 227 (282)
T ss_pred HHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999988876 333122 37899999999999888999999999999999999
Q ss_pred HHHHh
Q 000503 818 ADLAV 822 (1459)
Q Consensus 818 ~~l~~ 822 (1459)
+++..
T Consensus 228 ~~~~~ 232 (282)
T PRK13640 228 VEIFS 232 (282)
T ss_pred HHHhc
Confidence 88754
No 453
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3e-34 Score=320.71 Aligned_cols=196 Identities=21% Similarity=0.337 Sum_probs=160.0
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------c
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 673 (1459)
++++|+++.|+... ...++++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 2 l~~~~v~~~~~~~~--~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (218)
T cd03266 2 ITADALTKRFRDVK--KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRR 79 (218)
T ss_pred eEEEEEEEecCCCC--ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhh
Confidence 57889999986421 112469999999999999999999999999999999999999999999875 4
Q ss_pred EEEEcCCCCCCCC-CHHHHhccCCC---CC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 674 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 674 i~y~~Q~~~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
++|++|+|.++.. |++||+.+... .+ .++..+.++..++... ......+||||||||++||
T Consensus 80 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 148 (218)
T cd03266 80 LGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEEL-----------LDRRVGGFSTGMRQKVAIA 148 (218)
T ss_pred EEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhhhhhhcCHHHHHHHHHH
Confidence 8999999998875 99999976321 22 2234455565555432 3345679999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+.+.+.. ||++++|++|++.+.|
T Consensus 149 ral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 149 RALVHDPPVLLLDEPTTGLDVMATRALREF-IRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHhcCCCEEEEcCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999998888776 33312347899999999998765 9999999999998654
No 454
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-34 Score=331.95 Aligned_cols=206 Identities=25% Similarity=0.397 Sum_probs=167.3
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|..... ...++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~~~~~~~-~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13641 2 SIKFENVDYIYSPGTP-MEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNL 80 (287)
T ss_pred EEEEEEEEEEcCCCCC-ccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4678999999963211 012469999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCC--CCCCCCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHH
Q 000503 673 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1459)
Q Consensus 673 -----~i~y~~Q~~--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 738 (1459)
.++|++|+| .+++.|++|||.++.. .+. ++.+++++.++++.+. ......+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq 150 (287)
T PRK13641 81 KKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDL----------ISKSPFELSGGQ 150 (287)
T ss_pred HHHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH----------hhCCcccCCHHH
Confidence 389999998 5777899999987531 222 2345556666664222 234566899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCH
Q 000503 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 817 (1459)
Q Consensus 739 kqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~ 817 (1459)
|||++||||+..+|+++||||||++||+...+.+.+. +.....++.|+|++||+++.+. .||+|++|++|++++.|++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~-l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~ 229 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQL-FKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASP 229 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999998888775 4331234789999999999876 5999999999999999999
Q ss_pred HHHHh
Q 000503 818 ADLAV 822 (1459)
Q Consensus 818 ~~l~~ 822 (1459)
+++..
T Consensus 230 ~~~~~ 234 (287)
T PRK13641 230 KEIFS 234 (287)
T ss_pred HHHhc
Confidence 88753
No 455
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-34 Score=324.97 Aligned_cols=200 Identities=25% Similarity=0.387 Sum_probs=162.9
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------c
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 673 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 673 (1459)
+++|+++.|+.. .++|+|+||++++|++++|+||||||||||+++|.|+++|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (242)
T cd03295 2 EFENVTKRYGGG-----KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRK 76 (242)
T ss_pred EEEEEEEEeCCc-----ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcc
Confidence 578889988631 2359999999999999999999999999999999999999999998865 4
Q ss_pred EEEEcCCCCCCC-CCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 674 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 674 i~y~~Q~~~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
++|++|+|.++. .|++||+.++.. .+. ++..++++..++.. .......+.+||||||||++||
T Consensus 77 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~la 147 (242)
T cd03295 77 IGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVA 147 (242)
T ss_pred eEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHH
Confidence 899999999886 599999987532 222 23344445444432 0123456679999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHH
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLA 821 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 821 (1459)
||++.+|++++|||||++||+.+.+.+.+. +..... +++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 148 ral~~~p~llllDEPt~~LD~~~~~~l~~~-L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 148 RALAADPPLLLMDEPFGALDPITRDQLQEE-FKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999998888776 332122 3789999999999876 49999999999999999888764
No 456
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=326.56 Aligned_cols=203 Identities=26% Similarity=0.320 Sum_probs=167.7
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcC---ccC--CCeEEEEcC-------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGE---MML--THGSIHASG------- 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~---~~~--~~G~i~~~~------- 672 (1459)
.++++|+++.|.. .++|+|+||++++|++++|+||||||||||+++|+|. .++ ++|+|.++|
T Consensus 3 ~l~~~~~~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14245 3 KIDARDVNFWYGD------FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKG 76 (250)
T ss_pred EEEEEEEEEEECC------EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEeccccc
Confidence 5789999999853 2359999999999999999999999999999999996 454 589998764
Q ss_pred --------cEEEEcCCCCCCCCCHHHHhccCCC----CC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 673 --------SIAYVPQVPWILSGTIRDNILFGKN----YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 673 --------~i~y~~Q~~~l~~~ti~~nI~~g~~----~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
.++|++|+|.+++.|++||+.++.. .+ +++..++++.+++..++. +.....+.+|||
T Consensus 77 ~~~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 149 (250)
T PRK14245 77 VQVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSG 149 (250)
T ss_pred ccHHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCH
Confidence 3899999999998899999987531 11 223455666666644332 223466789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 150 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~ 227 (250)
T PRK14245 150 GQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEEL-IHE-LKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYD 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999988776 433 3457899999999999864 9999999999999999
Q ss_pred CHHHHHh
Q 000503 816 SSADLAV 822 (1459)
Q Consensus 816 ~~~~l~~ 822 (1459)
+++++..
T Consensus 228 ~~~~~~~ 234 (250)
T PRK14245 228 DTKKIFT 234 (250)
T ss_pred CHHHHhc
Confidence 9998753
No 457
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=326.48 Aligned_cols=204 Identities=23% Similarity=0.338 Sum_probs=166.7
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc--C---CCeEEEEcC------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM--L---THGSIHASG------ 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~--~---~~G~i~~~~------ 672 (1459)
..++++|+++.|.. .++|+|+||+|++||+++|+|+||||||||+++|+|.++ | ++|+|.++|
T Consensus 11 ~~l~i~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~ 84 (259)
T PRK14274 11 EVYQINGMNLWYGQ------HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKG 84 (259)
T ss_pred ceEEEeeEEEEECC------eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEcccc
Confidence 45899999998852 235999999999999999999999999999999999987 3 689998754
Q ss_pred ---------cEEEEcCCCCCCCCCHHHHhccCCCC----CHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccC
Q 000503 673 ---------SIAYVPQVPWILSGTIRDNILFGKNY----DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1459)
Q Consensus 673 ---------~i~y~~Q~~~l~~~ti~~nI~~g~~~----~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 735 (1459)
.++|++|+|.+++.|++||+.++... +++ +..++++..++.+++. +.....+.+||
T Consensus 85 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS 157 (259)
T PRK14274 85 KVDLVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLS 157 (259)
T ss_pred ccCHHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCC
Confidence 38999999999989999999876321 222 2333444555543221 22355677999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000503 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1459)
Q Consensus 736 GGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1459)
||||||++||||++.+|++++|||||++||+++.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.
T Consensus 158 ~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~ 235 (259)
T PRK14274 158 GGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEEL-ILK-LKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVEC 235 (259)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999998888765 433 3446899999999999764 999999999999999
Q ss_pred cCHHHHHh
Q 000503 815 GSSADLAV 822 (1459)
Q Consensus 815 g~~~~l~~ 822 (1459)
|+++++..
T Consensus 236 g~~~~~~~ 243 (259)
T PRK14274 236 NDTNKMFS 243 (259)
T ss_pred CCHHHHhh
Confidence 99998753
No 458
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=4.1e-34 Score=363.88 Aligned_cols=199 Identities=25% Similarity=0.330 Sum_probs=167.8
Q ss_pred CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCC--CceEEECCEeCCCCChHHHhcccEEEeCCCcCCCc-c
Q 000503 1237 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC--GGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEG-S 1313 (1459)
Q Consensus 1237 ~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~--~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~g-T 1313 (1459)
+.+|+|+|+++++||++||+||||||||||+++|.|+.+|. +|+|.+||.++. ...+++++||||++.+|+. |
T Consensus 81 ~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~----~~~~~~i~yv~Q~~~l~~~lT 156 (659)
T PLN03211 81 RTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPT----KQILKRTGFVTQDDILYPHLT 156 (659)
T ss_pred CeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECc----hhhccceEEECcccccCCcCC
Confidence 45999999999999999999999999999999999999885 899999999874 2456789999999999975 9
Q ss_pred HHHhcCcCC------CCChHHHHHHHHHhcHHHHHHhCCC----chhhhc-CCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000503 1314 LRDNLDPFH------MNDDLKIWSVLEKCHVKEEVEAVGL----ETFVKE-SGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1459)
Q Consensus 1314 IReNLdp~~------~~~d~ei~~aL~~~~l~~~i~~lGL----dt~v~e-~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1459)
+|||+.+.. ..++++..+ ...+.++.+|| ||.+|+ ....||||||||++|||||+++|+||+||
T Consensus 157 V~E~l~~~a~~~~~~~~~~~~~~~-----~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLD 231 (659)
T PLN03211 157 VRETLVFCSLLRLPKSLTKQEKIL-----VAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILD 231 (659)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHH-----HHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEe
Confidence 999996531 123333221 12344555555 666764 35679999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-H-hhcCEEEEEeCCeEEEecChhHHhc
Q 000503 1383 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1383 EaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~t-i-~~~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
|||++||+.+...+.+.|++.. +++|||+++|+++. + ..||+|++|++|++++.|+++++.+
T Consensus 232 EPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~ 296 (659)
T PLN03211 232 EPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMA 296 (659)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHH
Confidence 9999999999999999998865 58999999999984 4 4589999999999999999999874
No 459
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-34 Score=328.11 Aligned_cols=203 Identities=27% Similarity=0.417 Sum_probs=167.3
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|+++.|+.. . +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 6 ~~l~~~nl~~~~~~~-~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~ 81 (271)
T PRK13632 6 VMIKVENVSFSYPNS-E---NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEI 81 (271)
T ss_pred eEEEEEeEEEEcCCC-C---ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHH
Confidence 468899999998532 1 2359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCC--CCCCCHHHHhccCCC---CCHHH----HHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 --SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQS----YSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 --~i~y~~Q~~~--l~~~ti~~nI~~g~~---~~~~~----~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
.++||+|+|. +++.|++|||.++.. ++++. ..++++..++...+ .....+||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr 150 (271)
T PRK13632 82 RKKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYL-----------DKEPQNLSGGQKQR 150 (271)
T ss_pred hcceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCCcccCCHHHHHH
Confidence 3899999984 556799999987532 33332 34555666665433 34456999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC-CceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~-~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l 820 (1459)
++||||++.+|+++||||||++||+.+.+.+++. +.....+ ++|+|++||+++.+..||++++|++|++.+.|+.+++
T Consensus 151 l~laral~~~p~lllLDEP~~gLD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 229 (271)
T PRK13632 151 VAIASVLALNPEIIIFDESTSMLDPKGKREIKKI-MVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEI 229 (271)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988876 3321223 4899999999999888999999999999999998876
Q ss_pred Hh
Q 000503 821 AV 822 (1459)
Q Consensus 821 ~~ 822 (1459)
..
T Consensus 230 ~~ 231 (271)
T PRK13632 230 LN 231 (271)
T ss_pred hc
Confidence 43
No 460
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.8e-34 Score=337.28 Aligned_cols=203 Identities=26% Similarity=0.373 Sum_probs=167.7
Q ss_pred CceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000503 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1459)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1459)
...++++|++..|.. ..+|+|+||+|++|++++++||||||||||+++|+|+++|++|+|.++|
T Consensus 39 ~~~i~i~nl~k~y~~------~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~ 112 (340)
T PRK13536 39 TVAIDLAGVSKSYGD------KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLA 112 (340)
T ss_pred ceeEEEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHH
Confidence 356899999999853 2359999999999999999999999999999999999999999999876
Q ss_pred --cEEEEcCCCCCC-CCCHHHHhcc-CCC--CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHH
Q 000503 673 --SIAYVPQVPWIL-SGTIRDNILF-GKN--YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1459)
Q Consensus 673 --~i~y~~Q~~~l~-~~ti~~nI~~-g~~--~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRv 742 (1459)
.||||||++.++ +.|++||+.+ +.. .+. ++.+++++.++|... ...+..+||||||||+
T Consensus 113 ~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-----------~~~~~~~LS~G~kqrv 181 (340)
T PRK13536 113 RARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADARVSDLSGGMKRRL 181 (340)
T ss_pred hccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hCCChhhCCHHHHHHH
Confidence 499999999986 4599999975 321 122 223344444444321 2234468999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHH
Q 000503 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1459)
Q Consensus 743 alARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 821 (1459)
+||||+.++|+++||||||++||+.+.+.+.+. +......|+|+|++||+++.+.. ||+|++|++|+++..|+++++.
T Consensus 182 ~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~-l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~ 260 (340)
T PRK13536 182 TLARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALI 260 (340)
T ss_pred HHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999988876 33322357899999999999875 9999999999999999999986
Q ss_pred hc
Q 000503 822 VS 823 (1459)
Q Consensus 822 ~~ 823 (1459)
..
T Consensus 261 ~~ 262 (340)
T PRK13536 261 DE 262 (340)
T ss_pred hh
Confidence 54
No 461
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=6.1e-34 Score=327.70 Aligned_cols=201 Identities=24% Similarity=0.343 Sum_probs=165.0
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 79 (269)
T PRK11831 6 NLVDMRGVSFTRGN------RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRL 79 (269)
T ss_pred ceEEEeCeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhH
Confidence 46899999999852 2359999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCCCCCCC-CHHHHhccCC----CCCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHH
Q 000503 673 -----SIAYVPQVPWILSG-TIRDNILFGK----NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1459)
Q Consensus 673 -----~i~y~~Q~~~l~~~-ti~~nI~~g~----~~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 738 (1459)
.++|++|++.+++. |++||+.++. .++.+ +..+.++..++... ......+|||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq 148 (269)
T PRK11831 80 YTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGM 148 (269)
T ss_pred HHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHH
Confidence 38999999999876 9999998642 12222 23344455544322 223456899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecC
Q 000503 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1459)
Q Consensus 739 kqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~ 816 (1459)
|||++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 149 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~ 227 (269)
T PRK11831 149 ARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKL-ISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGS 227 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999888775 332112 37899999999998875 99999999999999999
Q ss_pred HHHHHh
Q 000503 817 SADLAV 822 (1459)
Q Consensus 817 ~~~l~~ 822 (1459)
++++..
T Consensus 228 ~~~~~~ 233 (269)
T PRK11831 228 AQALQA 233 (269)
T ss_pred HHHHhc
Confidence 988754
No 462
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=337.92 Aligned_cols=214 Identities=21% Similarity=0.272 Sum_probs=172.9
Q ss_pred cEEEEEEEEEecCCC-CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhccc
Q 000503 1222 LIEFQNVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1459)
.++++|++++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+.
T Consensus 21 mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~------------ 88 (549)
T PRK13545 21 FDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA------------ 88 (549)
T ss_pred eeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee------------
Confidence 489999999997542 4699999999999999999999999999999999999999999999999762
Q ss_pred EEEeCCCcCCC-ccHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000503 1301 AVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1459)
Q Consensus 1301 ~~VpQdp~lf~-gTIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1459)
++++.+.+++ .|+++|+.... ..++++..+. ..+.++.+|++.........||||||||++|||||+.+|
T Consensus 89 -~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e~-----i~elLe~lgL~~~ld~~~~~LSGGQrQRVaLArAL~~~P 162 (549)
T PRK13545 89 -LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKEI-----IPEIIEFADIGKFIYQPVKTYSSGMKSRLGFAISVHINP 162 (549)
T ss_pred -eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHcCChhHhhCCcccCCHHHHHHHHHHHHHHhCC
Confidence 2333444444 49999986532 2233332221 122333446666666667789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000503 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1454 (1459)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1454 (1459)
++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++..+.. .|.+++
T Consensus 163 ~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~~~-~~~~~~ 241 (549)
T PRK13545 163 DILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDHYD-EFLKKY 241 (549)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhhHH-HHHHHH
Confidence 9999999999999999999999998764 47899999999999876 89999999999999999999987533 454443
No 463
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.2e-34 Score=315.20 Aligned_cols=192 Identities=20% Similarity=0.273 Sum_probs=159.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGE--RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 478999999964 36999999999999999999999999999999999999999999999999998765 456789999
Q ss_pred EeCCCcCCC-ccHHHhcCcCCC-CC--hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000503 1303 VPQSPFLFE-GSLRDNLDPFHM-ND--DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1459)
Q Consensus 1303 VpQdp~lf~-gTIReNLdp~~~-~~--d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1459)
+||++.+|+ .|+++|+..... .. ++++.++++..++ +........+||||||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l---------~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 148 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGL---------TGFEDLPAAQLSAGQQRRLALARLWLSRAPL 148 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCC---------HHHhcCChhhcCHHHHHHHHHHHHHhcCCCE
Confidence 999998887 699999864321 11 2234455555444 4334444567999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhHhhcCEEEE
Q 000503 1379 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILI 1427 (1459)
Q Consensus 1379 LlLDEaTS~lD~~te~~I~~~I~~~-~~~~TvI~IaHrl~ti~~~DrIlV 1427 (1459)
++|||||++||..+.+.+.+.|++. .++.|+|++||+...+. ||+++.
T Consensus 149 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~-~~~~~~ 197 (198)
T TIGR01189 149 WILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGLV-EARELR 197 (198)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccccc-ceEEee
Confidence 9999999999999999999999875 35789999999985543 477654
No 464
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-34 Score=326.82 Aligned_cols=205 Identities=25% Similarity=0.346 Sum_probs=167.9
Q ss_pred CceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC-----
Q 000503 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG----- 672 (1459)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~----- 672 (1459)
+..++++|+++.|.. ..+|+|+||+|++|++++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 11 ~~~l~i~nl~~~~~~------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~ 84 (269)
T PRK14259 11 NIIISLQNVTISYGT------FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYD 84 (269)
T ss_pred CceEEEEeEEEEECC------EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 356899999999853 235999999999999999999999999999999999987 6899998765
Q ss_pred ----------cEEEEcCCCCCCCCCHHHHhccCCCC---C---HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 673 ----------SIAYVPQVPWILSGTIRDNILFGKNY---D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 673 ----------~i~y~~Q~~~l~~~ti~~nI~~g~~~---~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
.++|++|+|.++..|++||+.++... + +++..++++.+++...+. ........+|||
T Consensus 85 ~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 157 (269)
T PRK14259 85 PRVDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSG 157 (269)
T ss_pred ccCCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCH
Confidence 38999999999888999999876432 2 223344555555432221 234556779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeC-------
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDK------- 808 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~------- 808 (1459)
|||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++
T Consensus 158 G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~ 235 (269)
T PRK14259 158 GQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEET-MHE-LKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGS 235 (269)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhcCEEEEEecccccccc
Confidence 999999999999999999999999999999999988775 333 3446899999999998864 999999996
Q ss_pred ----CeEEEecCHHHHHh
Q 000503 809 ----GQVKWIGSSADLAV 822 (1459)
Q Consensus 809 ----G~i~~~g~~~~l~~ 822 (1459)
|++++.|+.+++..
T Consensus 236 ~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 236 GGKVGYLVEFNETKKIFN 253 (269)
T ss_pred ccccceEEEeCCHHHHHh
Confidence 67899999888754
No 465
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-34 Score=317.50 Aligned_cols=190 Identities=27% Similarity=0.374 Sum_probs=157.4
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------cE
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 674 (1459)
++++|+++.|.. . ..|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 i~~~~l~~~~~~----~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i 72 (211)
T cd03298 1 VRLDKIRFSYGE----Q----PMHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPV 72 (211)
T ss_pred CEEEeEEEEeCC----E----ecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccE
Confidence 357888888752 1 2399999999999999999999999999999999999999999876 38
Q ss_pred EEEcCCCCCCCC-CHHHHhccCCCC-------CHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHH
Q 000503 675 AYVPQVPWILSG-TIRDNILFGKNY-------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 746 (1459)
Q Consensus 675 ~y~~Q~~~l~~~-ti~~nI~~g~~~-------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalAR 746 (1459)
+|++|+|.++.+ |++||+.++... ++++..++++.++++..... ...+||||||||++|||
T Consensus 73 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ia~ 141 (211)
T cd03298 73 SMLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKR-----------LPGELSGGERQRVALAR 141 (211)
T ss_pred EEEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHHHHHH
Confidence 999999998875 999999875321 13345666777776544433 33589999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 747 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 747 aly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
|++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 142 al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 142 VLVRDKPVLLLDEPFAALDPALRAEMLDL-VLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999988776 33211 237899999999999875 9999999999998653
No 466
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-34 Score=327.73 Aligned_cols=205 Identities=25% Similarity=0.307 Sum_probs=166.5
Q ss_pred CceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC-----
Q 000503 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG----- 672 (1459)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~----- 672 (1459)
+..++++|+++.|+. ..+|+|+||++++|++++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 19 ~~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~ 92 (268)
T PRK14248 19 EHILEVKDLSIYYGE------KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILD 92 (268)
T ss_pred CceEEEEEEEEEeCC------ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccc
Confidence 346899999999852 235999999999999999999999999999999999864 6899998754
Q ss_pred ----------cEEEEcCCCCCCCCCHHHHhccCCCCC--------HHHHHHHHHHhcchhhHhhccCCCcccccCCCccc
Q 000503 673 ----------SIAYVPQVPWILSGTIRDNILFGKNYD--------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 734 (1459)
Q Consensus 673 ----------~i~y~~Q~~~l~~~ti~~nI~~g~~~~--------~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~L 734 (1459)
.++|++|++.++++|++||+.++..+. +++..++++.+++..++. ...+....+|
T Consensus 93 ~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~L 165 (268)
T PRK14248 93 SNINVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSL 165 (268)
T ss_pred ccccHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccC
Confidence 489999999999999999998753211 122333444444432221 2245667899
Q ss_pred CcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEE
Q 000503 735 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKW 813 (1459)
Q Consensus 735 SGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~ 813 (1459)
|||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++
T Consensus 166 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~ 243 (268)
T PRK14248 166 SGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEEL-ITE-LKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVE 243 (268)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHH-HHH-HhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999988775 333 344689999999999876 499999999999999
Q ss_pred ecCHHHHHh
Q 000503 814 IGSSADLAV 822 (1459)
Q Consensus 814 ~g~~~~l~~ 822 (1459)
.|+++++..
T Consensus 244 ~~~~~~~~~ 252 (268)
T PRK14248 244 YDQTEQIFT 252 (268)
T ss_pred eCCHHHHHh
Confidence 999888753
No 467
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3e-34 Score=340.04 Aligned_cols=188 Identities=26% Similarity=0.393 Sum_probs=158.1
Q ss_pred cceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC---------------------cEEEEcCCCCC
Q 000503 625 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------------------SIAYVPQVPWI 683 (1459)
Q Consensus 625 ~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------------------~i~y~~Q~~~l 683 (1459)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++| .++||+|++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 359999999999999999999999999999999999999999998875 39999999999
Q ss_pred CC-CCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEE
Q 000503 684 LS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIY 755 (1459)
Q Consensus 684 ~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~il 755 (1459)
++ .|++|||.++.. .++ ++..++++..+|+... .....+|||||||||+|||||+.+|+|+
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~-----------~~~~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWA-----------DKKPGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 87 699999998642 222 2345566666664332 2344589999999999999999999999
Q ss_pred EEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000503 756 MLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1459)
Q Consensus 756 llDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 823 (1459)
|||||||+||+.+.+.+.+.+..-....++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 9999999999999998888643211123789999999999875 5999999999999999999998643
No 468
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-34 Score=325.92 Aligned_cols=202 Identities=26% Similarity=0.344 Sum_probs=166.5
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC-------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------- 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~------- 672 (1459)
.++++|+++.|.. .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~------~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~ 77 (251)
T PRK14251 4 IISAKDVHLSYGN------YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSK 77 (251)
T ss_pred eEEEEeeEEEECC------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEccccc
Confidence 4789999999853 235999999999999999999999999999999999997 4799998765
Q ss_pred --------cEEEEcCCCCCCCCCHHHHhccCCC---C-CH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 673 --------SIAYVPQVPWILSGTIRDNILFGKN---Y-DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 673 --------~i~y~~Q~~~l~~~ti~~nI~~g~~---~-~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
.++|++|++.+++.|++||+.++.. . ++ ++..++++.+++..+.. ...+....+|||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 150 (251)
T PRK14251 78 MDLVELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETK-------DNLDRNAQAFSG 150 (251)
T ss_pred chHHHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchH-------HHhccChhhCCH
Confidence 3899999999999999999987532 1 12 23445555555532211 123456789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
|||||++||||++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 151 Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~ 228 (251)
T PRK14251 151 GQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEET-LME-LKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAG 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHH-HHH-HHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999888776 333 3446899999999999765 9999999999999999
Q ss_pred CHHHHH
Q 000503 816 SSADLA 821 (1459)
Q Consensus 816 ~~~~l~ 821 (1459)
+.+++.
T Consensus 229 ~~~~~~ 234 (251)
T PRK14251 229 PTEEMF 234 (251)
T ss_pred CHHHHH
Confidence 988874
No 469
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-34 Score=317.77 Aligned_cols=191 Identities=23% Similarity=0.390 Sum_probs=157.2
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC---------cEEEE
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------SIAYV 677 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------~i~y~ 677 (1459)
+++|+++.|.. +++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 2 ~~~~l~~~~~~------~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~ 75 (210)
T cd03269 2 EVENVTKRFGR------VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYL 75 (210)
T ss_pred EEEEEEEEECC------EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEe
Confidence 57888888752 2359999999999999999999999999999999999999999999986 49999
Q ss_pred cCCCCCCCC-CHHHHhccCCC---CC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHc
Q 000503 678 PQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 749 (1459)
Q Consensus 678 ~Q~~~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly 749 (1459)
+|++.++.+ |++||+.+... .+ +++..+.++..+++.. ......+||||||||++||||++
T Consensus 76 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~al~ 144 (210)
T cd03269 76 PEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEY-----------ANKRVEELSKGNQQKVQFIAAVI 144 (210)
T ss_pred ccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHH-----------HhCcHhhCCHHHHHHHHHHHHHh
Confidence 999988875 99999976421 11 2234445555555432 23456789999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 750 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 750 ~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
.+|+++||||||++||+.+.+++.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 ~~p~~lllDEP~~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 145 HDPELLILDEPFSGLDPVNVELLKDV-IRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999988876 33212347899999999998865 9999999999998654
No 470
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6e-34 Score=322.89 Aligned_cols=199 Identities=26% Similarity=0.353 Sum_probs=163.5
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|+++.|+. +++++|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~------~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 75 (240)
T PRK09493 2 IEFKNVSKHFGP------TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLI 75 (240)
T ss_pred EEEEeEEEEECC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHH
Confidence 568899998852 2359999999999999999999999999999999999999999998875
Q ss_pred --cEEEEcCCCCCCC-CCHHHHhccCC----CCCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 --SIAYVPQVPWILS-GTIRDNILFGK----NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 --~i~y~~Q~~~l~~-~ti~~nI~~g~----~~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
.++|++|++.++. .|++||+.++. ..+.+ +..++++..+++. ........||||||||
T Consensus 76 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G~~qr 144 (240)
T PRK09493 76 RQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAE-----------RAHHYPSELSGGQQQR 144 (240)
T ss_pred hhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChH-----------HHhcChhhcCHHHHHH
Confidence 3899999998875 59999998753 12222 2334444444432 2234557899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 820 (1459)
++||||++.+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 145 v~la~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (240)
T PRK09493 145 VAIARALAVKPKLMLFDEPTSALDPELRHEVLKV-MQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVL 223 (240)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHH
Confidence 9999999999999999999999999999888775 33212347899999999999875 999999999999999998876
Q ss_pred Hh
Q 000503 821 AV 822 (1459)
Q Consensus 821 ~~ 822 (1459)
..
T Consensus 224 ~~ 225 (240)
T PRK09493 224 IK 225 (240)
T ss_pred hc
Confidence 43
No 471
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.8e-34 Score=319.69 Aligned_cols=193 Identities=26% Similarity=0.379 Sum_probs=156.9
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|+++.|+... ...++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~--~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (221)
T TIGR02211 2 LKCENLGKRYQEGK--LDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAK 79 (221)
T ss_pred EEEEeeeEEccCCC--cceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHH
Confidence 57889999986321 112469999999999999999999999999999999999999999998864
Q ss_pred ----cEEEEcCCCCCCC-CCHHHHhccCC---CCCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHH
Q 000503 673 ----SIAYVPQVPWILS-GTIRDNILFGK---NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1459)
Q Consensus 673 ----~i~y~~Q~~~l~~-~ti~~nI~~g~---~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkq 740 (1459)
.++|++|+|.++. .|++||+.++. .++. ++..++++.++++.. ......+|||||||
T Consensus 80 ~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~q 148 (221)
T TIGR02211 80 LRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHR-----------INHRPSELSGGERQ 148 (221)
T ss_pred HHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHH
Confidence 3899999998885 59999998742 2222 234455555555432 23445689999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhcCCEEEEEeCCeEE
Q 000503 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1459)
Q Consensus 741 RvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~~~d~i~~l~~G~i~ 812 (1459)
||+||||++.+|+++||||||++||+.+.+.+.+. +.... ..++|+|++||+++.+..+|+|++|++|+++
T Consensus 149 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 149 RVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDL-MLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999988876 33211 2378999999999998889999999999875
No 472
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-34 Score=324.12 Aligned_cols=203 Identities=23% Similarity=0.349 Sum_probs=166.3
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC-----CeEEEEcC-------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT-----HGSIHASG------- 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~-----~G~i~~~~------- 672 (1459)
.++++|+++.|.. +++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|
T Consensus 4 ~l~~~~l~~~~~~------~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~ 77 (251)
T PRK14249 4 KIKIRGVNFFYHK------HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPN 77 (251)
T ss_pred eEEEEEEEEEECC------eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccc
Confidence 5789999999853 23599999999999999999999999999999999999987 69997754
Q ss_pred --------cEEEEcCCCCCCCCCHHHHhccCCCC----CH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 673 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 673 --------~i~y~~Q~~~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
.++|++|+|.+++.|++||+.++..+ .+ ++..++++..++...+. +..+..+.+|||
T Consensus 78 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 150 (251)
T PRK14249 78 LDVVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSG 150 (251)
T ss_pred cChHHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCH
Confidence 39999999999989999999876421 11 12233334444432222 234567889999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
||||||+||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 151 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~ 228 (251)
T PRK14249 151 GQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEEL-MQE-LKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYG 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeC
Confidence 999999999999999999999999999999999887765 433 3457899999999999876 8999999999999999
Q ss_pred CHHHHHh
Q 000503 816 SSADLAV 822 (1459)
Q Consensus 816 ~~~~l~~ 822 (1459)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14249 229 RTGEIFS 235 (251)
T ss_pred CHHHHHh
Confidence 9888743
No 473
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=326.20 Aligned_cols=203 Identities=25% Similarity=0.349 Sum_probs=166.8
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------ 672 (1459)
..++++|+++.|.. +++|+|+||+|++|++++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 11 ~~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~ 84 (258)
T PRK14268 11 PQIKVENLNLWYGE------KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEP 84 (258)
T ss_pred eeEEEeeeEEEeCC------eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccc
Confidence 46889999998852 2359999999999999999999999999999999999875 799998754
Q ss_pred ---------cEEEEcCCCCCCCCCHHHHhccCCC---CCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 673 ---------SIAYVPQVPWILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 673 ---------~i~y~~Q~~~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
.++|++|++.+++.|++||+.++.. .+.+ +..++++.+++..++. ........+|||
T Consensus 85 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 157 (258)
T PRK14268 85 DVDVVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLSG 157 (258)
T ss_pred cchHHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCCH
Confidence 3899999999988999999987531 2222 2344555555532221 223456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
||||||+||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 158 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~ 235 (258)
T PRK14268 158 GQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDL-IMN-LKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFG 235 (258)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHH-HHH-HhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988775 333 3347899999999999865 9999999999999999
Q ss_pred CHHHHH
Q 000503 816 SSADLA 821 (1459)
Q Consensus 816 ~~~~l~ 821 (1459)
+++++.
T Consensus 236 ~~~~~~ 241 (258)
T PRK14268 236 QTRQIF 241 (258)
T ss_pred CHHHHh
Confidence 998874
No 474
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-34 Score=302.35 Aligned_cols=206 Identities=26% Similarity=0.392 Sum_probs=167.2
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
.+++|.+..|.. ..+|++|||++++||+++++|+||+||||||++|.|..++.+|+|.++|
T Consensus 4 L~v~~l~~~YG~------~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r 77 (237)
T COG0410 4 LEVENLSAGYGK------IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERAR 77 (237)
T ss_pred eeEEeEeecccc------eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHh
Confidence 467788777753 2359999999999999999999999999999999999999999999987
Q ss_pred -cEEEEcCCCCCCCC-CHHHHhccCCCCCHH-HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHc
Q 000503 673 -SIAYVPQVPWILSG-TIRDNILFGKNYDPQ-SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 749 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~~-ti~~nI~~g~~~~~~-~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly 749 (1459)
.|+||||.-.+|.. ||+||+..|....+. ...+. .++.-.+.+|. .......++.+|||||||.+|+||||.
T Consensus 78 ~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~e~v~~lFP~-Lker~~~~aG~LSGGEQQMLAiaRALm 152 (237)
T COG0410 78 LGIAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DLEEVYELFPR-LKERRNQRAGTLSGGEQQMLAIARALM 152 (237)
T ss_pred CCeEeCcccccchhhCcHHHHHhhhhhcccccccccc----cHHHHHHHChh-HHHHhcCcccCCChHHHHHHHHHHHHh
Confidence 59999999999965 999999987433221 11110 02222334443 223456788899999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcch-hhcCCEEEEEeCCeEEEecCHHHHHhc
Q 000503 750 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAVS 823 (1459)
Q Consensus 750 ~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~-l~~~d~i~~l~~G~i~~~g~~~~l~~~ 823 (1459)
++|++|+||||+.+|-|...+.|++. +.... ..+.||++|.++..+ ++.|||.|+|++|+|+.+|+.+|+..+
T Consensus 153 ~~PklLLLDEPs~GLaP~iv~~I~~~-i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 153 SRPKLLLLDEPSEGLAPKIVEEIFEA-IKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred cCCCEEEecCCccCcCHHHHHHHHHH-HHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 99999999999999999999999987 33312 225699999999987 456999999999999999999998653
No 475
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-34 Score=324.61 Aligned_cols=203 Identities=24% Similarity=0.310 Sum_probs=168.7
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC-------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 672 (1459)
-++++|+++.|.. . .+|+|+||++++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~ 77 (251)
T PRK14270 4 KMESKNLNLWYGE---K---QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKD 77 (251)
T ss_pred EEEEEEeEEEECC---e---eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEeccccc
Confidence 4688999998852 2 359999999999999999999999999999999999875 799998864
Q ss_pred --------cEEEEcCCCCCCCCCHHHHhccCCCC----CH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 673 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 673 --------~i~y~~Q~~~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
.++|++|++.+++.|++||+.++... ++ ++..++++.+++..++.. ..+.....|||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 150 (251)
T PRK14270 78 VDVVELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSG 150 (251)
T ss_pred ccHHHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCH
Confidence 38999999999999999999875321 22 234566677766443332 23456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
|||||++||||++.+|+++||||||++||+.+.+++.+. +.. ..+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 151 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-L~~-~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (251)
T PRK14270 151 GQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDL-MVE-LKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFN 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeC
Confidence 999999999999999999999999999999999988775 433 3346899999999999875 9999999999999999
Q ss_pred CHHHHHh
Q 000503 816 SSADLAV 822 (1459)
Q Consensus 816 ~~~~l~~ 822 (1459)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14270 229 KTEKIFL 235 (251)
T ss_pred CHHHHhc
Confidence 9888743
No 476
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=1.6e-31 Score=311.61 Aligned_cols=336 Identities=21% Similarity=0.295 Sum_probs=239.7
Q ss_pred HhhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhhcCCCCCCCc
Q 000503 1082 TETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA----VIGSRGNLPATFS 1157 (1459)
Q Consensus 1082 ~E~l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~----v~~~~~~~~~~~~ 1157 (1459)
++...+.+.|.-|+.++..........++.-.......+...|+.+..+.+.- +..++...+ ++..+ .....
T Consensus 269 ~rlr~NaE~iAFY~g~~~E~~~~~~~f~~Lv~~l~~l~~~r~~l~f~~n~~~Y-lg~ilsy~vi~~p~Fs~h---~y~~~ 344 (659)
T KOG0060|consen 269 SRLRVNAEEIAFYRGGQVEHQRTDQRFRNLVQHLRELMSFRFWLGFIDNIFDY-LGGILSYVVIAIPFFSGH---VYDDL 344 (659)
T ss_pred eeeeecchhhhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhheeeEEeeeeeccc---ccCCc
Confidence 34455667788888776655555554444444444455667787776665542 111111111 11111 12233
Q ss_pred hHHHH-HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC----C----------c---ccccc---CCCC
Q 000503 1158 TPGLV-GLALS---YAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV----P----------Q---EELCG---YQSL 1213 (1459)
Q Consensus 1158 ~~g~v-gl~l~---~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~----~----------~---e~~~~---~~~~ 1213 (1459)
++... +..-. +...+.+.+..++....++..-.+-..||-|+.+. . + |.... ....
T Consensus 345 s~aEL~~~i~~na~~~i~Li~~f~~l~~~~~~ls~lsGyt~Ri~el~~~l~d~~~~~~~~~~~~~~~~E~~~~l~~~~G~ 424 (659)
T KOG0060|consen 345 SPAELSGLISNNAFVFIYLISAFGRLVDLSRDLSRLSGYTHRIGELMEVLDDLSSGSQECTMEEEELGEAEWGLSLPPGS 424 (659)
T ss_pred CHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHHhccCCcchhhhhhhhhhhhhccCCCCCC
Confidence 34333 22211 22233344445555555555555667788777532 0 0 00000 0111
Q ss_pred CCCCCCCccEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCCh
Q 000503 1214 SPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV 1293 (1459)
Q Consensus 1214 ~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~ 1293 (1459)
+..||....|+|++|++.=|.+.+...+|+||+|+.|+.+-|+||||||||||++.|-|+.+..+|++.--...-
T Consensus 425 ~~~~~~Dn~i~~e~v~l~tPt~g~~lie~Ls~~V~~g~~LLItG~sG~GKtSLlRvlggLWp~~~G~l~k~~~~~----- 499 (659)
T KOG0060|consen 425 GKAEPADNAIEFEEVSLSTPTNGDLLIENLSLEVPSGQNLLITGPSGCGKTSLLRVLGGLWPSTGGKLTKPTDGG----- 499 (659)
T ss_pred cccccccceEEeeeeeecCCCCCceeeeeeeeEecCCCeEEEECCCCCchhHHHHHHhcccccCCCeEEecccCC-----
Confidence 345788889999999999876666667889999999999999999999999999999999999999997532110
Q ss_pred HHHhcccEEEeCCCcCCCccHHHhcC-cC-------CCCChHHHHHHHHHhcHHHHHHhC-CCchhhh-cCCCCCChhHH
Q 000503 1294 RDLRGRFAVVPQSPFLFEGSLRDNLD-PF-------HMNDDLKIWSVLEKCHVKEEVEAV-GLETFVK-ESGISFSVGQR 1363 (1459)
Q Consensus 1294 ~~lR~~i~~VpQdp~lf~gTIReNLd-p~-------~~~~d~ei~~aL~~~~l~~~i~~l-GLdt~v~-e~G~~LSgGQr 1363 (1459)
-+.+=++||.|++-.||+|+-+- |. +..+|++|.+.|+.++|.+.++.. |+|+++. +-...||+||+
T Consensus 500 ---~~~lfflPQrPYmt~GTLRdQvIYP~~~~~~~~~~~~d~~i~r~Le~v~L~hl~~r~ggld~~~~~dW~dvLS~GEq 576 (659)
T KOG0060|consen 500 ---PKDLFFLPQRPYMTLGTLRDQVIYPLKAEDMDSKSASDEDILRILENVQLGHLLEREGGLDQQVDWDWMDVLSPGEQ 576 (659)
T ss_pred ---CCceEEecCCCCccccchhheeeccCccccccccCCCHHHHHHHHHHhhhhhHHHHhCCCCchhhccHHhhcCHHHH
Confidence 04589999999999999999973 31 235799999999999999999888 9997654 44567999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCC
Q 000503 1364 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHG 1431 (1459)
Q Consensus 1364 Qrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~DrIlVl~~G 1431 (1459)
||+|+||.++.+|++-+|||+|||||.+.|..+.+.+|+. +-|-|.|.||-+.-+.-|.++-|+.+
T Consensus 577 QRLa~ARLfy~kPk~AiLDE~TSAv~~dvE~~~Yr~~r~~--giT~iSVgHRkSL~kfHd~~L~~~g~ 642 (659)
T KOG0060|consen 577 QRLAFARLFYHKPKFAILDECTSAVTEDVEGALYRKCREM--GITFISVGHRKSLWKFHDYVLRMDGR 642 (659)
T ss_pred HHHHHHHHHhcCCceEEeechhhhccHHHHHHHHHHHHHc--CCeEEEeccHHHHHhhhhEEEEecCC
Confidence 9999999999999999999999999999999999999886 89999999999988888999999863
No 477
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.8e-34 Score=284.55 Aligned_cols=209 Identities=27% Similarity=0.362 Sum_probs=175.6
Q ss_pred cEEEEEEEEEecCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChH---HH
Q 000503 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DL 1296 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~l 1296 (1459)
.|+.++++..-+.. .-.+|++|+|.|++||.+||||+||||||||+..|.|+-+|++|+|.+.|.++.+++-+ .+
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 57888887776543 23589999999999999999999999999999999999999999999999999988854 55
Q ss_pred h-cccEEEeCCCcCCCc-cHHHhcC-cC---CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000503 1297 R-GRFAVVPQSPFLFEG-SLRDNLD-PF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1370 (1459)
Q Consensus 1297 R-~~i~~VpQdp~lf~g-TIReNLd-p~---~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LAR 1370 (1459)
| +++++|+|.-.|.+. |--||.. |. ++...+. +....+.++..||...+..-..+|||||+||++|||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~------~~~A~~lL~~vGLg~Rl~HyP~qLSGGEQQRVAiAR 159 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADS------RAGAKALLEAVGLGKRLTHYPAQLSGGEQQRVALAR 159 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccH------HHHHHHHHHHhCcccccccCccccCchHHHHHHHHH
Confidence 5 579999999988765 8899974 32 2211111 112233455558888888888899999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCeEEEe
Q 000503 1371 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1436 (1459)
Q Consensus 1371 ALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlVl~~G~IvE~ 1436 (1459)
|+.-.|+||+-||||-|||.+|-+.|-+.+-+.- .+.|.++|||+......|||++-|.+|+++|.
T Consensus 160 Afa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~~ 227 (228)
T COG4181 160 AFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVED 227 (228)
T ss_pred HhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceeccC
Confidence 9999999999999999999999999999886553 48899999999999999999999999999863
No 478
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-34 Score=330.05 Aligned_cols=206 Identities=25% Similarity=0.393 Sum_probs=166.0
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|+.... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~~-~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (280)
T PRK13649 2 GINLQNVSYTYQAGTP-FEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDI 80 (280)
T ss_pred eEEEEEEEEEcCCCCc-cccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCH
Confidence 3678999999864211 112469999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCC--CCCCCCHHHHhccCCC---CCHHH----HHHHHHHhcchhhHhhccCCCcccccCCCcccCcHH
Q 000503 673 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDPQS----YSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1459)
Q Consensus 673 -----~i~y~~Q~~--~l~~~ti~~nI~~g~~---~~~~~----~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 738 (1459)
.|+|++|+| .+++.|++|||.++.. .+.+. .+++++..++..+ .......+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~ 150 (280)
T PRK13649 81 KQIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQ 150 (280)
T ss_pred HHHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHH
Confidence 289999998 5778899999987532 23222 2334444444321 1244567899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCH
Q 000503 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 817 (1459)
Q Consensus 739 kqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~ 817 (1459)
|||++||||++.+|+++||||||++||+.+.+.+.+. +......++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 151 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (280)
T PRK13649 151 MRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTL-FKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKP 229 (280)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999888776 33212347899999999998864 999999999999999998
Q ss_pred HHHHh
Q 000503 818 ADLAV 822 (1459)
Q Consensus 818 ~~l~~ 822 (1459)
+++..
T Consensus 230 ~~~~~ 234 (280)
T PRK13649 230 KDIFQ 234 (280)
T ss_pred HHHhc
Confidence 88754
No 479
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-34 Score=324.78 Aligned_cols=203 Identities=28% Similarity=0.355 Sum_probs=165.6
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc--cC---CCeEEEEcC-------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM--ML---THGSIHASG------- 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~--~~---~~G~i~~~~------- 672 (1459)
.++++|+++.|.. +++|+|+||++++||+++|+||||||||||+++|.|.. +| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~------~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~ 78 (252)
T PRK14239 5 ILQVSDLSVYYNK------KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPR 78 (252)
T ss_pred eEEEEeeEEEECC------eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcc
Confidence 4789999999853 23599999999999999999999999999999999985 36 589998765
Q ss_pred --------cEEEEcCCCCCCCCCHHHHhccCCC---C-CH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 673 --------SIAYVPQVPWILSGTIRDNILFGKN---Y-DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 673 --------~i~y~~Q~~~l~~~ti~~nI~~g~~---~-~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
.++|++|+|.+++.|++||+.++.. . ++ ++..++++.+++...+. +..+....+|||
T Consensus 79 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 151 (252)
T PRK14239 79 TDTVDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSG 151 (252)
T ss_pred cchHhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCH
Confidence 3899999999999999999986521 1 12 22333455555433222 234566779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEec
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g 815 (1459)
|||||++||||+..+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 152 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 229 (252)
T PRK14239 152 GQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEET-LLG-LKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYN 229 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHH-HHH-HhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988875 433 334689999999999876 59999999999999999
Q ss_pred CHHHHHh
Q 000503 816 SSADLAV 822 (1459)
Q Consensus 816 ~~~~l~~ 822 (1459)
+.+++..
T Consensus 230 ~~~~~~~ 236 (252)
T PRK14239 230 DTKQMFM 236 (252)
T ss_pred CHHHHHh
Confidence 9888753
No 480
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-34 Score=330.93 Aligned_cols=207 Identities=28% Similarity=0.397 Sum_probs=164.4
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|+++.|+.... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~-~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 5 KDIILDNVSYTYAKKTP-FEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred ceEEEEEEEEEeCCCCc-cccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 35889999999864210 112469999999999999999999999999999999999999999998754
Q ss_pred -------cEEEEcCCCC--CCCCCHHHHhccCCC---CCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 673 -------SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 673 -------~i~y~~Q~~~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
.|+|++|+|. +++.|++|||.++.. .+.+ +..++++..+|.. + ..+....+|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~-------~---~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPE-------D---YVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh-------h---HhcCChhhCCH
Confidence 3899999984 667899999987632 2221 1223333333321 1 12456679999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEe
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWI 814 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~ 814 (1459)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||+|++|++|++++.
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~ 232 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINL-FERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI 232 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999888775 332112 3789999999999876 5999999999999999
Q ss_pred cCHHHHHh
Q 000503 815 GSSADLAV 822 (1459)
Q Consensus 815 g~~~~l~~ 822 (1459)
|+++++..
T Consensus 233 g~~~~~~~ 240 (289)
T PRK13645 233 GSPFEIFS 240 (289)
T ss_pred CCHHHHhc
Confidence 99888753
No 481
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=6.5e-34 Score=319.00 Aligned_cols=198 Identities=23% Similarity=0.336 Sum_probs=162.0
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|+++.|.. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~i~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~ 79 (225)
T PRK10247 6 PLLQLQNVGYLAGD------AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIY 79 (225)
T ss_pred ceEEEeccEEeeCC------ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHH
Confidence 46889999998852 2359999999999999999999999999999999999999999998876
Q ss_pred --cEEEEcCCCCCCCCCHHHHhccCCC-----CCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHH
Q 000503 673 --SIAYVPQVPWILSGTIRDNILFGKN-----YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1459)
Q Consensus 673 --~i~y~~Q~~~l~~~ti~~nI~~g~~-----~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1459)
.++|++|++++++.|++||+.++.. .++++..+.++.+++.. +.......+|||||||||+||
T Consensus 80 ~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~la 149 (225)
T PRK10247 80 RQQVSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLI 149 (225)
T ss_pred HhccEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHH
Confidence 4899999999998999999986421 12233445555555432 223456779999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEcCCcchhhcCCEEEEEe-CCeEEEecCHH
Q 000503 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMD-KGQVKWIGSSA 818 (1459)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~i~vth~~~~l~~~d~i~~l~-~G~i~~~g~~~ 818 (1459)
||++++|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+.+.++.||++++|+ ++..+++|+|+
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 150 RNLQFMPKVLLLDEITSALDESNKHNVNEI-IHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999998877765 33211 23789999999999998899999995 56666777764
No 482
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.6e-34 Score=322.59 Aligned_cols=197 Identities=21% Similarity=0.313 Sum_probs=163.9
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1459)
++++|+++.|+. .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 3 i~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (242)
T TIGR03411 3 LYLEGLSVSFDG------FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIAR 76 (242)
T ss_pred EEEEeeEEEcCC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHh
Confidence 678999998852 2359999999999999999999999999999999999999999999875
Q ss_pred -cEEEEcCCCCCCCC-CHHHHhccCCCCC---------------HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccC
Q 000503 673 -SIAYVPQVPWILSG-TIRDNILFGKNYD---------------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1459)
Q Consensus 673 -~i~y~~Q~~~l~~~-ti~~nI~~g~~~~---------------~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 735 (1459)
.++|++|++.++++ |++||+.++...+ +++..+.++..+++ ........+||
T Consensus 77 ~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS 145 (242)
T TIGR03411 77 AGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLA-----------DEADRLAGLLS 145 (242)
T ss_pred cCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCC
Confidence 38999999999886 9999998753211 12233333333332 22345667999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEe
Q 000503 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1459)
Q Consensus 736 GGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1459)
||||||++||||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.++. ||+|++|++|++++.
T Consensus 146 ~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~ 223 (242)
T TIGR03411 146 HGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAEL-LKS-LAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAE 223 (242)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHH-HHH-HhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEee
Confidence 9999999999999999999999999999999999988875 332 3346899999999999875 999999999999999
Q ss_pred cCHHHHH
Q 000503 815 GSSADLA 821 (1459)
Q Consensus 815 g~~~~l~ 821 (1459)
|+++++.
T Consensus 224 ~~~~~~~ 230 (242)
T TIGR03411 224 GSLDQVQ 230 (242)
T ss_pred CCHHHHh
Confidence 9988764
No 483
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=4.7e-34 Score=359.41 Aligned_cols=215 Identities=28% Similarity=0.448 Sum_probs=175.6
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccC--CCCCceEEEC----------------
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVD---------------- 1284 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~--~~~~G~I~ID---------------- 1284 (1459)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~ 78 (520)
T TIGR03269 1 IEVKNLTKKFDG--KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKV 78 (520)
T ss_pred CEEEEEEEEECC--eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccc
Confidence 578999999953 36999999999999999999999999999999999996 7999999997
Q ss_pred -------CEeCC-------CCC---hHHHhcccEEEeCC-CcCCCc-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHH
Q 000503 1285 -------GLNII-------NTP---VRDLRGRFAVVPQS-PFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEV 1342 (1459)
Q Consensus 1285 -------G~di~-------~i~---~~~lR~~i~~VpQd-p~lf~g-TIReNLdp~~---~~~d~ei~~aL~~~~l~~~i 1342 (1459)
|.++. ..+ ...+|++++++||+ +.+|+. |+++|+.+.. ..+.++.. ....+.+
T Consensus 79 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l 153 (520)
T TIGR03269 79 GEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV-----GRAVDLI 153 (520)
T ss_pred ccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHH
Confidence 33331 111 23467889999998 567764 9999986421 12222211 1233445
Q ss_pred HhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh
Q 000503 1343 EAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL 1420 (1459)
Q Consensus 1343 ~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I~~~I~~~~--~~~TvI~IaHrl~ti~ 1420 (1459)
+.+|++........+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.
T Consensus 154 ~~~gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~ 233 (520)
T TIGR03269 154 EMVQLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIE 233 (520)
T ss_pred HHcCChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHH
Confidence 55577666666677899999999999999999999999999999999999999999998864 3789999999999987
Q ss_pred h-cCEEEEEeCCeEEEecChhHHhc
Q 000503 1421 N-MDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1421 ~-~DrIlVl~~G~IvE~G~p~eLl~ 1444 (1459)
. ||+|++|++|++++.|+++++..
T Consensus 234 ~~~d~i~~l~~G~i~~~g~~~~~~~ 258 (520)
T TIGR03269 234 DLSDKAIWLENGEIKEEGTPDEVVA 258 (520)
T ss_pred HhcCEEEEEeCCEEeeecCHHHHHH
Confidence 6 89999999999999999998865
No 484
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=5.4e-34 Score=319.04 Aligned_cols=193 Identities=25% Similarity=0.391 Sum_probs=159.3
Q ss_pred EEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCcC---CCccHHHhcCcC
Q 000503 1245 FTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL---FEGSLRDNLDPF 1321 (1459)
Q Consensus 1245 l~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~l---f~gTIReNLdp~ 1321 (1459)
|+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..|++++|+||+|.+ |+.|+++|+...
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~-----~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~ 75 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPPAKGTVKVAGASPG-----KGWRHIGYVPQRHEFAWDFPISVAHTVMSG 75 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCccch-----HhhCcEEEecccccccCCCCccHHHHHHhc
Confidence 578999999999999999999999999999999999999998864 357789999999976 457999998543
Q ss_pred CC--------CC---hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCH
Q 000503 1322 HM--------ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDA 1390 (1459)
Q Consensus 1322 ~~--------~~---d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~ 1390 (1459)
.. .. ++++.++++. +|++.........||+|||||++||||++++|+++||||||++||+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~ 146 (223)
T TIGR03771 76 RTGHIGWLRRPCVADFAAVRDALRR---------VGLTELADRPVGELSGGQRQRVLVARALATRPSVLLLDEPFTGLDM 146 (223)
T ss_pred cccccccccCCcHHHHHHHHHHHHH---------hCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 11 01 1223333333 3555445555567999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000503 1391 QTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1454 (1459)
Q Consensus 1391 ~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G~p~eLl~~~~~~f~~l~ 1454 (1459)
.+.+.+.+.|++.. +++|+|++||+++.+.+ ||+|+++ +|++++.|+++++.++. ...+++
T Consensus 147 ~~~~~l~~~l~~~~~~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~~~~~--~~~~~~ 209 (223)
T TIGR03771 147 PTQELLTELFIELAGAGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQLQDPA--PWMTTF 209 (223)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHhcChH--HHHHHh
Confidence 99999999998764 47899999999998876 8999999 79999999999997642 344443
No 485
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=327.12 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=167.1
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|+.. ..+|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 77 (277)
T PRK13652 3 LIETRDLCYSYSGS-----KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVR 77 (277)
T ss_pred eEEEEEEEEEeCCC-----CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHH
Confidence 36789999998532 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCC--CCCCCHHHHhccCC---CCCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHH
Q 000503 673 -SIAYVPQVPW--ILSGTIRDNILFGK---NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1459)
Q Consensus 673 -~i~y~~Q~~~--l~~~ti~~nI~~g~---~~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRv 742 (1459)
.++||+|+|. +++.|++||+.++. .++++ +.++.++.+++...+. .....||||||||+
T Consensus 78 ~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qrl 146 (277)
T PRK13652 78 KFVGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRD-----------RVPHHLSGGEKKRV 146 (277)
T ss_pred hheEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHHHHHH
Confidence 3899999983 67789999998753 23433 3455666666654333 34458999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHH
Q 000503 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 743 alARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 820 (1459)
+||||++.+|+++||||||++||+.+.+.+.+. +..... ++.|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 147 ~laraL~~~p~llilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~ 225 (277)
T PRK13652 147 AIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDF-LNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEI 225 (277)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999998888775 332122 3789999999999985 5999999999999999999988
Q ss_pred Hh
Q 000503 821 AV 822 (1459)
Q Consensus 821 ~~ 822 (1459)
..
T Consensus 226 ~~ 227 (277)
T PRK13652 226 FL 227 (277)
T ss_pred hc
Confidence 54
No 486
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=325.39 Aligned_cols=201 Identities=26% Similarity=0.348 Sum_probs=166.1
Q ss_pred CceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000503 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1459)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1459)
+..++++|+++.|+. +.+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 9 ~~~l~i~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~ 82 (265)
T PRK10575 9 DTTFALRNVSFRVPG------RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKA 82 (265)
T ss_pred CceEEEeeEEEEECC------EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHH
Confidence 346899999999852 2359999999999999999999999999999999999999999999876
Q ss_pred ---cEEEEcCCCCCCCC-CHHHHhccCCC--------C---CHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcH
Q 000503 673 ---SIAYVPQVPWILSG-TIRDNILFGKN--------Y---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1459)
Q Consensus 673 ---~i~y~~Q~~~l~~~-ti~~nI~~g~~--------~---~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 737 (1459)
.++|++|++-++.+ |++||+.++.. . ++++..+.++.++++..+. ....+||||
T Consensus 83 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG 151 (265)
T PRK10575 83 FARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAH-----------RLVDSLSGG 151 (265)
T ss_pred HhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-----------CCcccCCHH
Confidence 38999999876654 99999987531 1 1234556666666654333 234589999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhh-cCCEEEEEeCCeEEEec
Q 000503 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 738 QkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g 815 (1459)
||||++||||+..+|+++||||||++||+.+.+.+.+. +..... .+.|+|++||+++.+. .||+|++|++|++++.|
T Consensus 152 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~-l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~ 230 (265)
T PRK10575 152 ERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLAL-VHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQG 230 (265)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEec
Confidence 99999999999999999999999999999998887775 332112 3789999999999986 59999999999999999
Q ss_pred CHHHHH
Q 000503 816 SSADLA 821 (1459)
Q Consensus 816 ~~~~l~ 821 (1459)
+.+++.
T Consensus 231 ~~~~~~ 236 (265)
T PRK10575 231 TPAELM 236 (265)
T ss_pred CHHHhc
Confidence 988764
No 487
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.4e-34 Score=334.05 Aligned_cols=187 Identities=24% Similarity=0.342 Sum_probs=158.7
Q ss_pred cceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------cEEEEcCCCCCCCC-CHHHH
Q 000503 625 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------SIAYVPQVPWILSG-TIRDN 691 (1459)
Q Consensus 625 ~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~i~y~~Q~~~l~~~-ti~~n 691 (1459)
++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+||++|++.++.. |++||
T Consensus 7 ~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~ 86 (302)
T TIGR01188 7 KAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGREN 86 (302)
T ss_pred eEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHH
Confidence 359999999999999999999999999999999999999999999876 38999999998875 99999
Q ss_pred hccCCC---CC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccc
Q 000503 692 ILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAV 764 (1459)
Q Consensus 692 I~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~l 764 (1459)
+.+... .+ .++.+++++.+++.... .....+||||||||++||||++++|++++|||||++|
T Consensus 87 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gL 155 (302)
T TIGR01188 87 LEMMGRLYGLPKDEAEERAEELLELFELGEAA-----------DRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGL 155 (302)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------CCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 986421 12 23455666776665432 2345689999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHHHhc
Q 000503 765 DAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVS 823 (1459)
Q Consensus 765 D~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 823 (1459)
|+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 156 D~~~~~~l~~~-l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 156 DPRTRRAIWDY-IRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999988876 33322347899999999999875 999999999999999999998654
No 488
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=8.1e-34 Score=317.68 Aligned_cols=197 Identities=25% Similarity=0.290 Sum_probs=157.7
Q ss_pred EEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000503 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1459)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1459)
+.++|++.+|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... .....
T Consensus 23 l~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~-----~~~~~- 94 (224)
T cd03220 23 LGILGRKGEVGE--FWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSLL-----GLGGG- 94 (224)
T ss_pred hhhhhhhhhcCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchhh-----ccccc-
Confidence 678888888864 4699999999999999999999999999999999999999999999999986421 11111
Q ss_pred EeCCCcCCCccHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000503 1303 VPQSPFLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1459)
Q Consensus 1303 VpQdp~lf~gTIReNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1459)
+..+.|+++|+..... .+.++..+ ...+.++.+|++.........||||||||++||||++++|+++
T Consensus 95 -----~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 164 (224)
T cd03220 95 -----FNPELTGRENIYLNGRLLGLSRKEIDE-----KIDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIATALEPDIL 164 (224)
T ss_pred -----CCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 2234699999864321 12222111 1223333346665555566689999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCeEEEec
Q 000503 1380 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1380 lLDEaTS~lD~~te~~I~~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlVl~~G~IvE~G 1437 (1459)
||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 165 llDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 165 LIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999998764 46899999999999875 8999999999998865
No 489
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7e-34 Score=320.30 Aligned_cols=197 Identities=28% Similarity=0.425 Sum_probs=161.7
Q ss_pred EEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000503 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1459)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1459)
+++|+++.|+. .++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (230)
T TIGR03410 2 EVSNLNVYYGQ------SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARA 75 (230)
T ss_pred EEEeEEEEeCC------eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHh
Confidence 57888998852 2359999999999999999999999999999999999999999998865
Q ss_pred cEEEEcCCCCCCCC-CHHHHhccCCC-CC---HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHH
Q 000503 673 SIAYVPQVPWILSG-TIRDNILFGKN-YD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 747 (1459)
Q Consensus 673 ~i~y~~Q~~~l~~~-ti~~nI~~g~~-~~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARa 747 (1459)
.++|++|++.++.. |++||+.++.. .. .+.+.++++..+. ..........+||||||||++||||
T Consensus 76 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~la~a 145 (230)
T TIGR03410 76 GIAYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLAIARA 145 (230)
T ss_pred CeEEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHHHHHH
Confidence 38999999998876 99999987532 11 2233344443321 1122345667899999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhc-CCEEEEEeCCeEEEecCHHHH
Q 000503 748 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 748 ly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 820 (1459)
++.+|+++||||||++||+.+.+++.+. +..... .++|+|++||+++.+.. ||+|+++++|++++.|+.+++
T Consensus 146 l~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 146 LVTRPKLLLLDEPTEGIQPSIIKDIGRV-IRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999999988776 332122 37899999999999885 999999999999999998876
No 490
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=322.65 Aligned_cols=202 Identities=26% Similarity=0.354 Sum_probs=166.1
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC-------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 672 (1459)
.++++|+++.|.. .++++|+||+|++||+++|+||||||||||+++|+|..++ ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14240 3 KISVKDLDLFYGD------FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSD 76 (250)
T ss_pred eEEEEEEEEEECC------ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 4788999999853 1359999999999999999999999999999999998763 699998865
Q ss_pred --------cEEEEcCCCCCCCCCHHHHhccCCCC----C----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 673 --------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 673 --------~i~y~~Q~~~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
.++|++|+|.+++.|++||+.++... + +++..++++.+++..++. ...+..+.+|||
T Consensus 77 ~~~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 149 (250)
T PRK14240 77 IDVNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSG 149 (250)
T ss_pred cchHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCH
Confidence 38999999999889999999876321 1 123344555555543332 223556779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEeCCeEEEec
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1459)
|||||++||||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 150 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (250)
T PRK14240 150 GQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEEL-IQE-LKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFG 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999888765 433 3457899999999998765 9999999999999999
Q ss_pred CHHHHH
Q 000503 816 SSADLA 821 (1459)
Q Consensus 816 ~~~~l~ 821 (1459)
+.+++.
T Consensus 228 ~~~~~~ 233 (250)
T PRK14240 228 DTVDLF 233 (250)
T ss_pred CHHHHH
Confidence 988874
No 491
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=323.51 Aligned_cols=204 Identities=25% Similarity=0.332 Sum_probs=168.9
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------ 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~------ 672 (1459)
..++++|+++.|.. . ++|+|+||+|++|++++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 9 ~~l~i~~v~~~~~~---~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 82 (264)
T PRK14243 9 TVLRTENLNVYYGS---F---LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAP 82 (264)
T ss_pred eEEEEeeeEEEECC---E---EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEcccc
Confidence 36899999999853 2 35999999999999999999999999999999999876 4799998765
Q ss_pred ---------cEEEEcCCCCCCCCCHHHHhccCCCC---C---HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcH
Q 000503 673 ---------SIAYVPQVPWILSGTIRDNILFGKNY---D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1459)
Q Consensus 673 ---------~i~y~~Q~~~l~~~ti~~nI~~g~~~---~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 737 (1459)
.++|++|++.+++.|++|||.++... . +++..++++.+++..++.. ..+..+.+||||
T Consensus 83 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgG 155 (264)
T PRK14243 83 DVDPVEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGG 155 (264)
T ss_pred ccChHHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHH
Confidence 38999999999988999999876421 1 2334455666666544431 235567799999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEe---------
Q 000503 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMD--------- 807 (1459)
Q Consensus 738 QkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~--------- 807 (1459)
||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|+
T Consensus 156 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~ 233 (264)
T PRK14243 156 QQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEEL-MHE-LKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGR 233 (264)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEecCHHHHHHhCCEEEEEeccccccccc
Confidence 99999999999999999999999999999999988775 333 3445899999999998875 99999998
Q ss_pred CCeEEEecCHHHHHh
Q 000503 808 KGQVKWIGSSADLAV 822 (1459)
Q Consensus 808 ~G~i~~~g~~~~l~~ 822 (1459)
+|++++.|+.+++..
T Consensus 234 ~g~i~~~~~~~~~~~ 248 (264)
T PRK14243 234 YGYLVEFDRTEKIFN 248 (264)
T ss_pred CceEEEeCCHHHHHh
Confidence 799999999988853
No 492
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-34 Score=327.26 Aligned_cols=203 Identities=26% Similarity=0.347 Sum_probs=168.0
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|+.... .++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~---~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 80 (277)
T PRK13642 4 ILEVENLVFKYEKESD---VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLR 80 (277)
T ss_pred eEEEEEEEEEcCCCCc---CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHh
Confidence 4789999999964211 2369999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCC--CCCCCHHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHH
Q 000503 673 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1459)
Q Consensus 673 -~i~y~~Q~~~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRv 742 (1459)
.++|++|+|. +++.|+.|||.++.. ..+ ++++++++.+++.... ......||||||||+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv 149 (277)
T PRK13642 81 RKIGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFK-----------TREPARLSGGQKQRV 149 (277)
T ss_pred cceEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHHH
Confidence 3899999984 667899999987521 222 2345566666664322 234568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHHH
Q 000503 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 821 (1459)
Q Consensus 743 alARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 821 (1459)
+||||++.+|+++||||||++||+.+.+.+.+. +..... .+.|+|++||+++.+..||+|++|++|++++.|+++++.
T Consensus 150 ~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (277)
T PRK13642 150 AVAGIIALRPEIIILDESTSMLDPTGRQEIMRV-IHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELF 228 (277)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999988875 332122 278999999999999889999999999999999998875
Q ss_pred h
Q 000503 822 V 822 (1459)
Q Consensus 822 ~ 822 (1459)
.
T Consensus 229 ~ 229 (277)
T PRK13642 229 A 229 (277)
T ss_pred c
Confidence 4
No 493
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=4.6e-34 Score=311.94 Aligned_cols=177 Identities=27% Similarity=0.383 Sum_probs=146.1
Q ss_pred CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCC--CChHHHhcccEEEeCCC--cCCCc
Q 000503 1237 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRFAVVPQSP--FLFEG 1312 (1459)
Q Consensus 1237 ~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~--i~~~~lR~~i~~VpQdp--~lf~g 1312 (1459)
..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++++|+||+| .+|..
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 84 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLFAA 84 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhccccc
Confidence 459999999999999999999999999999999999999999999999999852 23456788999999998 57888
Q ss_pred cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCC
Q 000503 1313 SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVD 1389 (1459)
Q Consensus 1313 TIReNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD 1389 (1459)
|++||+.+.. ..++++..+ .+.+.++.+|++.........||+|||||++|||||+++|+++||||||++||
T Consensus 85 tv~~nl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 159 (190)
T TIGR01166 85 DVDQDVAFGPLNLGLSEAEVER-----RVREALTAVGASGLRERPTHCLSGGEKKRVAIAGAVAMRPDVLLLDEPTAGLD 159 (190)
T ss_pred cHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9999996421 122222211 12233344466555556667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CCcEEEEeccChhh
Q 000503 1390 AQTASILQNAISSEC-KGMTVITIAHRIST 1418 (1459)
Q Consensus 1390 ~~te~~I~~~I~~~~-~~~TvI~IaHrl~t 1418 (1459)
+++.+.+.+.|++.. +++|||+|||+++.
T Consensus 160 ~~~~~~~~~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 160 PAGREQMLAILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeecccc
Confidence 999999999998764 47899999999875
No 494
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=8.9e-34 Score=324.66 Aligned_cols=201 Identities=25% Similarity=0.320 Sum_probs=165.4
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|+++.|+. . .+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~~l~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~ 77 (257)
T PRK10619 4 NKLNVIDLHKRYGE---H---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDG 77 (257)
T ss_pred ccEEEeeeEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccc
Confidence 35889999999852 2 359999999999999999999999999999999999999999998765
Q ss_pred ---------------cEEEEcCCCCCCCC-CHHHHhccCC----CCCH----HHHHHHHHHhcchhhHhhccCCCccccc
Q 000503 673 ---------------SIAYVPQVPWILSG-TIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIG 728 (1459)
Q Consensus 673 ---------------~i~y~~Q~~~l~~~-ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig 728 (1459)
.++|++|++.++.. |++||+.++. ..++ ++..+.++..++...+ .+
T Consensus 78 ~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~ 147 (257)
T PRK10619 78 QLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QG 147 (257)
T ss_pred ccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hh
Confidence 38999999998875 9999997642 1222 2333444444443221 13
Q ss_pred CCCcccCcHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhc-CCEEEEEe
Q 000503 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMD 807 (1459)
Q Consensus 729 ~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~-~d~i~~l~ 807 (1459)
....+||||||||++||||++++|+++||||||++||+.+.+.+.+. +......++|+|++||+++.+.. ||+|++|+
T Consensus 148 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~ 226 (257)
T PRK10619 148 KYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRI-MQQLAEEGKTMVVVTHEMGFARHVSSHVIFLH 226 (257)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEE
Confidence 45679999999999999999999999999999999999999988875 33312347899999999999986 99999999
Q ss_pred CCeEEEecCHHHHH
Q 000503 808 KGQVKWIGSSADLA 821 (1459)
Q Consensus 808 ~G~i~~~g~~~~l~ 821 (1459)
+|++++.|+++++.
T Consensus 227 ~G~i~~~~~~~~~~ 240 (257)
T PRK10619 227 QGKIEEEGAPEQLF 240 (257)
T ss_pred CCEEEEeCCHHHhh
Confidence 99999999988874
No 495
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.1e-33 Score=318.15 Aligned_cols=196 Identities=25% Similarity=0.303 Sum_probs=160.5
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1459)
.++++|+++.|..... ..++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 6 ~l~~~~l~~~~~~~~~--~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 83 (228)
T PRK10584 6 IVEVHHLKKSVGQGEH--ELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARA 83 (228)
T ss_pred eEEEeeeEEEccCCCc--ceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHH
Confidence 5789999999864211 01359999999999999999999999999999999999999999998764
Q ss_pred -----cEEEEcCCCCCCCC-CHHHHhccCC---CCC----HHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHH
Q 000503 673 -----SIAYVPQVPWILSG-TIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1459)
Q Consensus 673 -----~i~y~~Q~~~l~~~-ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 739 (1459)
.++|++|+|.++.. |++||+.++. ..+ +++..+.++.+++...+. ....+||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Ge~ 152 (228)
T PRK10584 84 KLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLD-----------HLPAQLSGGEQ 152 (228)
T ss_pred HHHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHHH
Confidence 38999999988875 9999998642 112 234556666766654333 23458999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEe
Q 000503 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWI 814 (1459)
Q Consensus 740 qRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~ 814 (1459)
||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+.+.+..||++++|++|++++.
T Consensus 153 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 153 QRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADL-LFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999998888776 332112 37899999999999888999999999998753
No 496
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=8.4e-34 Score=302.21 Aligned_cols=161 Identities=25% Similarity=0.393 Sum_probs=144.0
Q ss_pred EEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--cEEEEcCCCCC
Q 000503 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWI 683 (1459)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~~~l 683 (1459)
++++|+++.|+.. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|++++
T Consensus 1 i~~~~~~~~~~~~-----~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~ 75 (166)
T cd03223 1 IELENLSLATPDG-----RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYL 75 (166)
T ss_pred CEEEEEEEEcCCC-----CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCcc
Confidence 3578899988532 2359999999999999999999999999999999999999999999987 79999999999
Q ss_pred CCCCHHHHhccCCCCCHHHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCCccc
Q 000503 684 LSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSA 763 (1459)
Q Consensus 684 ~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~~s~ 763 (1459)
++.|++||+.++ ....||||||||++||||++++|++++|||||++
T Consensus 76 ~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~ 121 (166)
T cd03223 76 PLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSA 121 (166)
T ss_pred ccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccc
Confidence 989999999864 2358999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhhcCCEEEEEeCC
Q 000503 764 VDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 809 (1459)
Q Consensus 764 lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~~~d~i~~l~~G 809 (1459)
||+.+.+.+.+. +.. . ++|+|++||+.+....||++++|++|
T Consensus 122 LD~~~~~~l~~~-l~~-~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 122 LDEESEDRLYQL-LKE-L--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred cCHHHHHHHHHH-HHH-h--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 999999988876 332 2 58999999999988789999999875
No 497
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-34 Score=340.55 Aligned_cols=187 Identities=25% Similarity=0.390 Sum_probs=157.5
Q ss_pred ceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------------cEEEEcCCCCCCC-CC
Q 000503 626 VLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILS-GT 687 (1459)
Q Consensus 626 ~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------------~i~y~~Q~~~l~~-~t 687 (1459)
+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++| .++|++|++.++. .|
T Consensus 43 ~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~T 122 (400)
T PRK10070 43 GVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMT 122 (400)
T ss_pred EEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCC
Confidence 59999999999999999999999999999999999999999998865 4899999999886 59
Q ss_pred HHHHhccCCC---CCH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHHHHHHHHHccCCCEEEEcCC
Q 000503 688 IRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDV 760 (1459)
Q Consensus 688 i~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe~ 760 (1459)
++|||.++.. ++. ++..++++.++|+.... ....+|||||||||+||||++.+|+++|||||
T Consensus 123 v~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~-----------~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEP 191 (400)
T PRK10070 123 VLDNTAFGMELAGINAEERREKALDALRQVGLENYAH-----------SYPDELSGGMRQRVGLARALAINPDILLMDEA 191 (400)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhh-----------cCcccCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 9999987632 222 34455666666654333 34458999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000503 761 LSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1459)
Q Consensus 761 ~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 823 (1459)
|++||+.+.+.+.+.+..-....++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 192 ts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 192 FSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 99999999998887632211124789999999999876 4999999999999999999988653
No 498
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.2e-34 Score=319.51 Aligned_cols=197 Identities=23% Similarity=0.293 Sum_probs=144.0
Q ss_pred cEEEEEEEEEecCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhccCCCCCceEEECCEeCCCCChHHHhcccE
Q 000503 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1459)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1459)
.+-+.||+|.|+. ..|.+++++|-|.--.+|+||||+|.|||||+++|.|-++|+.|+..=+ -|-+||
T Consensus 586 vLGlH~VtFgy~g-qkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPG-QKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCC-CCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 4678999999965 4578999999999999999999999999999999999999999987543 245788
Q ss_pred EEeCCCc--C-CCccHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhh-cCCCCCChhHHHHHHHHHHHccCCC
Q 000503 1302 VVPQSPF--L-FEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVK-ESGISFSVGQRQLICLARALLKSSK 1377 (1459)
Q Consensus 1302 ~VpQdp~--l-f~gTIReNLdp~~~~~d~ei~~aL~~~~l~~~i~~lGLdt~v~-e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1459)
..-|..- | -..|--|.|.-.-...-++.+.+|-..| |.+... -.-..||||||-|+++|-.-++.|+
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fG---------L~sHAHTikikdLSGGQKaRValaeLal~~PD 724 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARKQLGTFG---------LASHAHTIKIKDLSGGQKARVALAELALGGPD 724 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHHHhhhhh---------hhhccceEeeeecCCcchHHHHHHHHhcCCCC
Confidence 8877642 1 1223333332111112233344444443 333211 0123599999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcC-EEEEEeCCeEEEe-cChhH
Q 000503 1378 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMD-EILILDHGHLVEQ-GNPQT 1441 (1459)
Q Consensus 1378 ILlLDEaTS~lD~~te~~I~~~I~~~~~~~TvI~IaHrl~ti~~~D-rIlVl~~G~IvE~-G~p~e 1441 (1459)
||||||||.+||.++-..+-++|+++ +..||+|+|+-..|..-| ..+|+++-.|-|. |..++
T Consensus 725 vlILDEPTNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eIdGdFeD 788 (807)
T KOG0066|consen 725 VLILDEPTNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCNLWVVENQGIDEIDGDFED 788 (807)
T ss_pred EEEecCCCCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCceEEEEccCChhhccccHHH
Confidence 99999999999999999999999876 347999999988887643 3556665555443 44433
No 499
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=325.50 Aligned_cols=203 Identities=25% Similarity=0.381 Sum_probs=166.5
Q ss_pred ceEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000503 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1459)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1459)
..++++|+++.|.... .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~i~~l~~~~~~~~----~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~ 81 (269)
T PRK13648 6 SIIVFKNVSFQYQSDA----SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKL 81 (269)
T ss_pred ceEEEEEEEEEcCCCC----CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHH
Confidence 3588999999986321 2359999999999999999999999999999999999999999999876
Q ss_pred --cEEEEcCCCC--CCCCCHHHHhccCCC---CCHH----HHHHHHHHhcchhhHhhccCCCcccccCCCcccCcHHHHH
Q 000503 673 --SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1459)
Q Consensus 673 --~i~y~~Q~~~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 741 (1459)
.++|++|+|+ +++.|+++|+.++.. .+.+ +..++++..++... ......+||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 150 (269)
T PRK13648 82 RKHIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLER-----------ADYEPNALSGGQKQR 150 (269)
T ss_pred HhheeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCCcccCCHHHHHH
Confidence 3899999996 445699999988632 2222 23344454444322 224567899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEcCCcchhhcCCEEEEEeCCeEEEecCHHHH
Q 000503 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 820 (1459)
Q Consensus 742 valARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~i~vth~~~~l~~~d~i~~l~~G~i~~~g~~~~l 820 (1459)
++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+..||+|++|++|++++.|+++++
T Consensus 151 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 229 (269)
T PRK13648 151 VAIAGVLALNPSVIILDEATSMLDPDARQNLLDL-VRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEI 229 (269)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988875 333122 37899999999999888999999999999999999887
Q ss_pred Hh
Q 000503 821 AV 822 (1459)
Q Consensus 821 ~~ 822 (1459)
..
T Consensus 230 ~~ 231 (269)
T PRK13648 230 FD 231 (269)
T ss_pred hc
Confidence 54
No 500
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.35 Aligned_cols=202 Identities=26% Similarity=0.349 Sum_probs=164.8
Q ss_pred eEEEEcceEeccCCCccccccceeeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC-------
Q 000503 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 672 (1459)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 672 (1459)
.++++|+++.|.. .++++|+||++++|++++|+||||||||||+++|.|+++| ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 76 (250)
T PRK14247 3 KIEIRDLKVSFGQ------VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMD 76 (250)
T ss_pred eEEEEeeEEEECC------eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCC
Confidence 4788999998853 2359999999999999999999999999999999999974 799998875
Q ss_pred ------cEEEEcCCCCCC-CCCHHHHhccCCCC-----CH----HHHHHHHHHhcchhhHhhccCCCcccccCCCcccCc
Q 000503 673 ------SIAYVPQVPWIL-SGTIRDNILFGKNY-----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1459)
Q Consensus 673 ------~i~y~~Q~~~l~-~~ti~~nI~~g~~~-----~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 736 (1459)
.|||++|+|.++ +.|++||+.++... +. ++..++++.+++...+. ........+|||
T Consensus 77 ~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 149 (250)
T PRK14247 77 VIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGKLSG 149 (250)
T ss_pred HHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCcccCCH
Confidence 489999999755 57999999875321 11 23345555555543221 123455679999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEcCCcchhh-cCCEEEEEeCCeEEEec
Q 000503 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 815 (1459)
Q Consensus 737 GQkqRvalARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~i~vth~~~~l~-~~d~i~~l~~G~i~~~g 815 (1459)
||||||+||||+.++|++++|||||++||+.+.+++.+. +.. +.+++|+|++||+++.+. .||+|++|++|++.+.|
T Consensus 150 G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 227 (250)
T PRK14247 150 GQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESL-FLE-LKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWG 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEEC
Confidence 999999999999999999999999999999999988876 333 345789999999999986 59999999999999999
Q ss_pred CHHHHH
Q 000503 816 SSADLA 821 (1459)
Q Consensus 816 ~~~~l~ 821 (1459)
+++++.
T Consensus 228 ~~~~~~ 233 (250)
T PRK14247 228 PTREVF 233 (250)
T ss_pred CHHHHH
Confidence 988874
Done!