Query 000503
Match_columns 1459
No_of_seqs 449 out of 5632
Neff 7.8
Searched_HMMs 29240
Date Tue Mar 26 17:05:17 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000503.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_276-280//hhsearch_pdb/000503hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1614.8 108.9 1214 223-1457 2-1316(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1286.5 101.7 1154 278-1458 47-1271(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 754.0 62.1 513 940-1457 137-653 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 719.0 51.3 511 939-1457 108-625 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 686.4 56.4 561 888-1457 27-590 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 685.3 60.5 568 882-1457 7-578 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 665.8 56.6 561 889-1459 5-578 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 664.5 66.9 560 888-1457 15-579 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 660.6 70.1 560 888-1457 15-579 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 652.7 65.6 562 889-1457 10-583 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1614.78 Aligned_cols=1214 Identities=18% Similarity=0.201 Sum_probs=912.5
Q ss_pred HHCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC-------------CCCCCCHHHHHHHH-HHHHHHHHHHH
Q ss_conf 980014-9888789989999999158999999999984210-------------89985169999999-75979999999
Q 000503 223 MNRGVI-KQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSC-------------NCTNPSLVRAICCA-YGYPYICLGLL 287 (1459)
Q Consensus 223 ~~~g~~-~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~-------------~~~~~~l~~~l~~~-~~~~~~~~~~~ 287 (1459)
++.|.+ ++|+..|.+.+.|++..+...+.+++.|.....+ ..++.++ +.+|+. -++..++..+-
T Consensus 2 ~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 2 LRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSI-PQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp --CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCH-HHHTTTCCHHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCH-HHHHHCCCHHHHHHHHHH
T ss_conf 8773100687635445679501110000113454243554334310012232025687799-997315676789999999
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHCC-------C--------CC-CH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999989999---99999998426-------8--------87-34-----799999999999999999999999999
Q 000503 288 KVVNDSIGFAGPL---LLNKLIKFLQQ-------G--------SG-HL-----DGYVLAIALGLTSILKSFFDTQYSFHL 343 (1459)
Q Consensus 288 ~l~~~~~~~~~P~---ll~~li~~l~~-------~--------~~-~~-----~g~~l~~~l~~~~~~~a~~~~~~~~~~ 343 (1459)
.++..+...+.|+ ++.++++.+.+ . .. .. .-..++..++.+.++..++.-.+.+..
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999982499432578986699999996699999999-99999997999999999999988679999
Q 000503 344 SKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKFAFV 422 (1459)
Q Consensus 344 ~r~~~~~r~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nLms~D~~ri~~~~-~~~~~~w~~p~~i~i~~~lL~~~lG~a~l 422 (1459)
...+.++-..+...+|+|.++++....++.++|+++|.++.|++++.+++ ..+..++..++.++.++.+++..-...++
T Consensus 161 ~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~l 240 (1321)
T 4f4c_A 161 LYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLTL 240 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889899879984899999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999899999999999999999999999999999999965899998170699999999999999999999999999
Q 000503 423 SGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDA 502 (1459)
Q Consensus 423 ~g~~~~~~~~~~~~~~~~~~~~~q~~~~~~~d~Rv~~~se~L~~ik~IK~~~we~~~~~~i~~~R~~El~~~~~~~~~~~ 502 (1459)
+.++++.+..++..++++++.+.+++.++..+++.+.++|.++|||+||+|+||+.+.+++.+..++..+...+.....+
T Consensus 241 v~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1321)
T 4f4c_A 241 VMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLG 320 (1321)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999983999998214299999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 99999989889--9999999999880998877479999999999999999999999999999999999999619998862
Q 000503 503 WCVFFWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH 580 (1459)
Q Consensus 503 ~~~~~~~~~p~--~~~~~tf~~y~~~~~~L~~~~~Ftslsl~~~l~~pl~~lp~~i~~~~~a~~s~~RI~~fL~~~e~~~ 580 (1459)
........... ++.+++++.+.+.++.++++.+|+.++++..+..|+..++..++.+.++.+|++||.+||+.++..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 400 (1321)
T 4f4c_A 321 ISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVID 400 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999999599869999999999999999999899999999999999999999971785345
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCEEECEEEECCCCEEEEECCCCCCHHHHHHHHHCC
Q ss_conf 44320199986457876668898459997225860578853335540000147409969999968998478999998638
Q 000503 581 ELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGE 660 (1459)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~L~~isl~i~~G~l~~IvG~vGSGKSTLL~ailGe 660 (1459)
........+ ...+..|+++|++|+|+..++.|+ |+|+||++++|++++||||+|||||||+++|+|+
T Consensus 401 ~~~~~~~~~----------~~~~g~I~~~nvsF~Y~~~~~~~v---L~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~ 467 (1321)
T 4f4c_A 401 SSSKAGRKD----------MKIKGDITVENVHFTYPSRPDVPI---LRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRY 467 (1321)
T ss_dssp CSSSCCCCC----------CCCCCCEEEEEEEECCSSSTTSCS---EEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTS
T ss_pred CCCCCCCCC----------CCCCCCEEEEEEEEECCCCCCCCE---EECEEEEECCCCEEEEEECCCCCHHHHHHHHCCC
T ss_conf 666556567----------788876799985540799998743---3331886228827899805898577888875456
Q ss_pred CCCCCEEEEECC-------------CEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCC
Q ss_conf 557870899709-------------0999858987778778898625999-99788999999842115574106997530
Q 000503 661 MMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAY 726 (1459)
Q Consensus 661 ~~~~~G~v~~~g-------------~iayv~Q~pwl~n~TIreNIlfg~~-~d~~~y~~vi~aC~L~~Dl~~lp~GD~T~ 726 (1459)
+++.+|+|.++| +||||+|+|||+|+||||||+||.+ .+++++.++++.|++++|++.||+||+|+
T Consensus 468 ~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~ 547 (1321)
T 4f4c_A 468 YDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTL 547 (1321)
T ss_dssp SCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSE
T ss_pred CCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCE
T ss_conf 51644861579965011259998504666587533207861678864155220999999998756546887088888607
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHCCCEEEEE
Q ss_conf 26797656708999999999881499988870775441499999999994208456896599973782012108989999
Q 000503 727 IGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVM 806 (1459)
Q Consensus 727 iGe~G~~LSGGQkqRIaLARAlY~~~~IllLDD~~SaLD~~t~~~I~~~~i~g~ll~~kTvIlvTH~~~~l~~aD~Ii~l 806 (1459)
|||+|.+|||||||||+||||+|++|+|++||||+||||+++++. +++++.+ ++++||+|++||+++.++.||+|++|
T Consensus 548 vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~-i~~~l~~-~~~~~T~iiiaHrls~i~~aD~Iivl 625 (1321)
T 4f4c_A 548 VGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGI-VQQALDK-AAKGRTTIIIAHRLSTIRNADLIISC 625 (1321)
T ss_dssp ESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHH-HHHHHHH-HHTTSEEEEECSCTTTTTTCSEEEEE
T ss_pred ECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH-HHHHHHH-HHCCCEEEEECCCHHHHHHCCEEEEE
T ss_conf 558988777778799999998725999899845544688789999-9999999-84798899973638789868989996
Q ss_pred ECCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHH--HH--HCCCC-----CC--------HHHHHHHH----------
Q ss_conf 398599932977887400257655543210113332--21--00123-----41--------13444210----------
Q 000503 807 DKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQK--QE--MRTNA-----SS--------ANKQILLQ---------- 859 (1459)
Q Consensus 807 ~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~-----~~--------~~~~~~~~---------- 859 (1459)
++|+|+++|+|+||++.++.+.++..........+. +. ..... .. ...+....
T Consensus 626 ~~G~ive~Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1321)
T 4f4c_A 626 KNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSI 705 (1321)
T ss_dssp ETTEEEEEECHHHHHTTTCHHHHHHHHHHHHHHHHHHHCC----------------------------------------
T ss_pred ECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 39965136899999985327999999622122223323344332232111222223422222221102211101321245
Q ss_pred ------CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-
Q ss_conf ------01346777404666689888506412787999874145-8999999999999999985256565421034578-
Q 000503 860 ------EKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG-WFITLVICLSAILMQASRNGNDLWLSYWVDTTGS- 931 (1459)
Q Consensus 860 ------~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~- 931 (1459)
+++.....+.......++.++.+.....+|+.|....+ |...++.++...+.........+|+..|.+....
T Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 785 (1321)
T 4f4c_A 706 TNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGN 785 (1321)
T ss_dssp ----------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSC
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 67740257775315403899999999707863109999999877899999999999999999999999999999875179
Q ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCHHHHHHHHHHHHHH
Q ss_conf -8887641378999999999999999999999999999999999999999885386433135--6711589999602544
Q 000503 932 -SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQ--TPGGRILNRFSSDLYM 1008 (1459)
Q Consensus 932 -~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~il~~p~~ff~~--~~~G~ilnRfs~Di~~ 1008 (1459)
........+|..+|++++++..++.++..+.+...+.+.+.++|++++++++++|++|||. +|+|+++|||++|++.
T Consensus 786 ~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~ 865 (1321)
T 4f4c_A 786 PADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPN 865 (1321)
T ss_dssp SSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHH
T ss_conf 34556678999999999999999999999999999999999999999988873499333216788848888502505999
Q ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCH
Q ss_conf 20002699999999998677866479888789999999999999999999999999999999863041476788621447
Q 000503 1009 IDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGS 1088 (1459)
Q Consensus 1009 id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl 1088 (1459)
+|..++..+..++..++.+++.++++.+..|++++++++++.++++...++.+..+.......+..++...++.|+++|+
T Consensus 866 i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi 945 (1321)
T 4f4c_A 866 LRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENV 945 (1321)
T ss_dssp HHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999865377770221378689999999988899999999999999999999999888988999999627
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 999751938999999999999999999999999999999999999999999999999-8406888777721999999999
Q 000503 1089 STIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV-IGSRGNLPATFSTPGLVGLALS 1167 (1459)
Q Consensus 1089 ~tIRaf~~~~~~~~~~~~~ld~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~g~vglal~ 1167 (1459)
.+||+|++|+.+.+++.+.++...+..+.....+.+.......+..+...++..... +...+ .....++.+...+.
T Consensus 946 ~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~---~~~~~~~~~~~~~~ 1022 (1321)
T 4f4c_A 946 RTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITD---PPTMQPMRVLRVMY 1022 (1321)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSS---SCSSCHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCHHHHHHHHH
T ss_conf 988861414889999999999999999999999999999999999999999998757887537---65421478999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEE
Q ss_conf 999999999999999999999989999999630387211126789999999984089998999966998-9520112499
Q 000503 1168 YAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFT 1246 (1459)
Q Consensus 1168 ~~~~~~~~l~~li~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vL~~isl~ 1246 (1459)
+......++..+...+.+++..+.+++|+.++.+.++|... ...+++.||..|.|+|+||+|+|++.. .+||+|+||+
T Consensus 1023 ~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~-~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~ 1101 (1321)
T 4f4c_A 1023 AITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDS-LSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFS 1101 (1321)
T ss_dssp HHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCT-TCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEE
T ss_conf 99877889999999999999999999989998607665777-66778788888818999879857999988212451699
Q ss_pred EECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCC---CC
Q ss_conf 748919999889998489999998436989986699979748999957771562898077767775478831869---99
Q 000503 1247 IEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF---HM 1323 (1459)
Q Consensus 1247 I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~---~~ 1323 (1459)
|+|||+||||||||||||||+++|+|+++|++|+|.|||+||+++++++||+++++|||||++|+||||+||..+ .+
T Consensus 1102 I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~ 1181 (1321)
T 4f4c_A 1102 VEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSS 1181 (1321)
T ss_dssp ECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTT
T ss_pred ECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCC
T ss_conf 88989999989999819999999956863899789999998654999999854599878997327239999745499999
Q ss_pred CCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 9927789999990099999968--99405416999999359999999998724997799856676989997999999999
Q 000503 1324 NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAIS 1401 (1459)
Q Consensus 1324 ~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~Te~~i~~~i~ 1401 (1459)
++|+|+|+|++.++++++|+++ ||||.|+|+|.+||||||||+|||||++|+|+|||||||||+||.+||+.||++|+
T Consensus 1182 ~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~ 1261 (1321)
T 4f4c_A 1182 VTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALD 1261 (1321)
T ss_dssp SCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 99999999999829849997176789998238891569999999999999971799899968111578999999999999
Q ss_pred HHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHH
Q ss_conf 83599479985258136753097999929859895693578502993899999850
Q 000503 1402 SECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1402 ~~f~~~TvI~IaHrl~ti~~~DrI~vl~~G~ivE~g~p~~Ll~~~~s~f~~l~~~~ 1457 (1459)
+.+++||+|+||||++|+++||+|+|||+|+|+|+|+|+||++++ |.|++||+.+
T Consensus 1262 ~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~-g~y~~L~~~Q 1316 (1321)
T 4f4c_A 1262 RAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEK-GAYYKLTQKQ 1316 (1321)
T ss_dssp TTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC-----------
T ss_pred HHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCC-CHHHHHHHHH
T ss_conf 973999899960689999969999999898999988889998498-0999999999
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1286.53 Aligned_cols=1154 Identities=17% Similarity=0.207 Sum_probs=832.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C-------CC-----------C-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5979999999999999998999999999998426-8-------87-----------3-4799999999999999999999
Q 000503 278 GYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-G-------SG-----------H-LDGYVLAIALGLTSILKSFFDT 337 (1459)
Q Consensus 278 ~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~-~-------~~-----------~-~~g~~l~~~l~~~~~~~a~~~~ 337 (1459)
++.++...+..++..++....|+++..+++.+.. . .. . .....++..++.+.++..++.-
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1284)
T 3g5u_A 47 RLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAY 126 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999998613444332222221111100244688999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH--
Q ss_conf 9999999999999999999999998249943257898669999999669999999999-9999979999999999999--
Q 000503 338 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYLLY-- 414 (1459)
Q Consensus 338 ~~~~~~~r~~~~~r~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nLms~D~~ri~~~~~~-~~~~w~~p~~i~i~~~lL~-- 414 (1459)
...+...+.+.++-..+...+|+|.++++.....+.++|+++|.++.|++.+.+.... +..+....+.++.++.++.
T Consensus 127 ~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 206 (1284)
T 3g5u_A 127 IQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTR 206 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999998699899756887789999998899999999999999999999999999999999
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf -8867999999999999899999999999999999999999999999999965899998170699999999999999999
Q 000503 415 -TQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKH 493 (1459)
Q Consensus 415 -~~lG~a~l~g~~~~~~~~~~~~~~~~~~~~~q~~~~~~~d~Rv~~~se~L~~ik~IK~~~we~~~~~~i~~~R~~El~~ 493 (1459)
+.+++. .++++.++..+..++.+.+.+..++..+..++..+...|.++||++||.|++|+.+.++..+.-++-.+.
T Consensus 207 ~~~l~l~---~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~ 283 (1284)
T 3g5u_A 207 GWKLTLV---ILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRL 283 (1284)
T ss_dssp TSSSHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 8999999---9999999999999999999999999999999999999999978799998465399999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998988--99999999999880998877479999999999999999999999999999999999999
Q 000503 494 LSTRKYLDAWCVFFWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTR 571 (1459)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~p--~~~~~~tf~~y~~~~~~L~~~~~Ftslsl~~~l~~pl~~lp~~i~~~~~a~~s~~RI~~ 571 (1459)
..+..........+..... ..+..++++.+.+..+.++++.+++.+..+.....|+..+...+..+.++.++.+|+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~ 363 (1284)
T 3g5u_A 284 GIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFK 363 (1284)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999299889999999999999999999999999999999999999999
Q ss_pred HHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCEEECEEEECCCCEEEEECCCCCCHH
Q ss_conf 61999886244320199986457876668898459997225860578853335540000147409969999968998478
Q 000503 572 FLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKS 651 (1459)
Q Consensus 572 fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~L~~isl~i~~G~l~~IvG~vGSGKS 651 (1459)
+++.++..+........+ ......|+++|++|+|+.+.+.+. |+|+||++++|+.++|+||+|||||
T Consensus 364 ~l~~~~~~~~~~~~~~~~----------~~~~g~i~~~~v~~~y~~~~~~~v---L~~isl~i~~G~~~~ivG~sGsGKS 430 (1284)
T 3g5u_A 364 IIDNKPSIDSFSKSGHKP----------DNIQGNLEFKNIHFSYPSRKEVQI---LKGLNLKVKSGQTVALVGNSGCGKS 430 (1284)
T ss_dssp TTSCCCCCSSCCSSCCCC----------TTCCCCEEEEEEEECCSSTTSCCS---EEEEEEEECTTCEEEEECCSSSSHH
T ss_pred HHCCCCCCCCCCCCCCCC----------CCCCCEEEEEEEEEECCCCCCCCC---EECCEEEECCCCEEEEECCCCCCHH
T ss_conf 972898677666567777----------777771899998997699998710---1254589759988999899999799
Q ss_pred HHHHHHHCCCCCCCEEEEECC-------------CEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHCCHHHHH
Q ss_conf 999998638557870899709-------------0999858987778778898625999-99788999999842115574
Q 000503 652 SLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDIS 717 (1459)
Q Consensus 652 TLL~ailGe~~~~~G~v~~~g-------------~iayv~Q~pwl~n~TIreNIlfg~~-~d~~~y~~vi~aC~L~~Dl~ 717 (1459)
||+++|+|++++.+|+|.++| .|+||+|+||++++||||||.+|.+ .+++++.++++.|++.++++
T Consensus 431 Tl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~ 510 (1284)
T 3g5u_A 431 TTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIM 510 (1284)
T ss_dssp HHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH
T ss_conf 99999807889997389999998775799999865489868875377669999745798999999999999829699997
Q ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH
Q ss_conf 10699753026797656708999999999881499988870775441499999999994208456896599973782012
Q 000503 718 LMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI 797 (1459)
Q Consensus 718 ~lp~GD~T~iGe~G~~LSGGQkqRIaLARAlY~~~~IllLDD~~SaLD~~t~~~I~~~~i~g~ll~~kTvIlvTH~~~~l 797 (1459)
.+|+|++|.+||+|.+|||||||||+||||+|++|+|++||||+|+||+++++.+.+. +.. +.+++|+|++||+++.+
T Consensus 511 ~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~-l~~-~~~~~t~i~itH~l~~i 588 (1284)
T 3g5u_A 511 KLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAA-LDK-AREGRTTIVIAHRLSTV 588 (1284)
T ss_dssp HSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHH-HHH-HHTTSEEEEECSCHHHH
T ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH-HHH-HCCCCEEEEEECCHHHH
T ss_conf 4656334501478786599999999999999529998999798777799999999999-999-73999899994077899
Q ss_pred HCCCEEEEEECCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHH--HH----HHCC---CCC-CHHHHHH---HHCCCC-
Q ss_conf 10898999939859993297788740025765554321011333--22----1001---234-1134442---100134-
Q 000503 798 SAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQ--KQ----EMRT---NAS-SANKQIL---LQEKDV- 863 (1459)
Q Consensus 798 ~~aD~Ii~l~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~--~~----~~~~---~~~-~~~~~~~---~~~~~~- 863 (1459)
..||+|++|++|+++++|+++++....+.+.++........... .. .... ... ....... ......
T Consensus 589 ~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (1284)
T 3g5u_A 589 RNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSI 668 (1284)
T ss_dssp TTCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC------------------------------------------
T ss_pred HCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 74998999989999997889999867877999999743002211133333322222344333333332000345433344
Q ss_pred CCCCCCHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCCCCCCCCCC
Q ss_conf 677740466668988850--6412787999874145899999999999999998525656542----1034578888764
Q 000503 864 VSVSDDAQEIIEVEQRKE--GRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSY----WVDTTGSSQTKYS 937 (1459)
Q Consensus 864 ~~~~~~~~~~~~~e~~~~--g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~----w~~~~~~~~~~~~ 937 (1459)
....+.......++..+. ....+..+..|.+.. |...++.+++.++..+......+++.. |.+..........
T Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 747 (1284)
T 3g5u_A 669 CGPHDQDRKLSTKEALDEDVPPASFWRILKLNSTE-WPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQN 747 (1284)
T ss_dssp ---------------CCCCCSCCCTTHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHH
T ss_pred CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 56422332110245553136625899999984515-79999999999999999999999999999998556850336779
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCHHHHHHHHHHHHHHHHCHHHH
Q ss_conf 137899999999999999999999999999999999999999988538643313--567115899996025442000269
Q 000503 938 TSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFD--QTPGGRILNRFSSDLYMIDDSLPF 1015 (1459)
Q Consensus 938 ~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~il~~p~~ff~--~~~~G~ilnRfs~Di~~id~~l~~ 1015 (1459)
...|..+|++++++..++.+.+.+.+.+.+.+...++|.+++++++++|++||+ .+++|+++||+++|++.++..++.
T Consensus 748 ~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~ 827 (1284)
T 3g5u_A 748 SNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGS 827 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999983998887578998899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHH
Q ss_conf 999999999867786647988878---99999999999999999999999999999998630414767886214479997
Q 000503 1016 ILNILLANFVGLLGIAVVLSYVQV---FFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIR 1092 (1459)
Q Consensus 1016 ~l~~~~~~~~~~i~~~~~i~~~~~---~~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIR 1092 (1459)
.+..++..++.+++.++++.+..| +++++.+|+.+++.+++..+.+.... ......+....++.|+++|+.+||
T Consensus 828 ~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~e~l~gi~ti~ 904 (1284)
T 3g5u_A 828 RLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQAL---KDKKELEGSGKIATEAIENFRTVV 904 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTTCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999996999999999999999999999999999999---999999999999999998899999
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 51938999999999999999999999999999999999999999999999999840688877772199999999999999
Q 000503 1093 AFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPI 1172 (1459)
Q Consensus 1093 af~~~~~~~~~~~~~ld~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vglal~~~~~~ 1172 (1459)
+|++++.+.+++.+..+...+..... ..|.+....+...+.....+....++.. ....+..+.+.+...+.+....
T Consensus 905 a~~~e~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~-lv~~~~~~~~~~~~~~~~~~~~ 980 (1284)
T 3g5u_A 905 SLTREQKFETMYAQSLQIPYRNAMKK---AHVFGITFSFTQAMMYFSYAAAFRFGAY-LVTQQLMTFENVLLVFSAIVFG 980 (1284)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCSSSCSCSTTHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCHHHHHHHHHHHHHH
T ss_conf 84659999999999999999999999---9999999999999999999999999999-9990980699999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCCEEEEEEEECCC
Q ss_conf 999999999999999998999999963038721112678999999998408999899996699-8952011249974891
Q 000503 1173 VSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGT 1251 (1459)
Q Consensus 1173 ~~~l~~li~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~Ge 1251 (1459)
..++..+...+.++.....+.+|+.++.+.+++.........+.++.+|.|+|+||+++|+.. ..++|+|+||+|++||
T Consensus 981 ~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge 1060 (1284)
T 3g5u_A 981 AMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQ 1060 (1284)
T ss_dssp HHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCC
T ss_conf 99999999999999999999999999983887666655566545677785799998997799998700203059976998
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC---CCCHHH
Q ss_conf 99998899984899999984369899866999797489999577715628980777677754788318699---999277
Q 000503 1252 QVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDLK 1328 (1459)
Q Consensus 1252 kvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~---~~sd~e 1328 (1459)
++||||+||||||||+++|+|+++|++|+|.+||+|+++++++.+|+++++|||||.+|++|||+|+.++. ..++++
T Consensus 1061 ~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~ 1140 (1284)
T 3g5u_A 1061 TLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEE 1140 (1284)
T ss_dssp EEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHH
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHH
T ss_conf 89998899997899999994686789977989999800078999970268987787406666999974668778999999
Q ss_pred HHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 89999990099999968--9940541699999935999999999872499779985667698999799999999983599
Q 000503 1329 IWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKG 1406 (1459)
Q Consensus 1329 i~~aL~~~~L~~~i~~l--gLdt~i~e~G~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~ 1406 (1459)
+++++++++++++++.+ |+||.++|+|.+||||||||+|||||++++|+||+||||||++|.++++.|++.|++..++
T Consensus 1141 i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~ 1220 (1284)
T 3g5u_A 1141 IVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREG 1220 (1284)
T ss_dssp HHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 99999983959999727042456117888933899999999999997499999986875557999999999999986799
Q ss_pred CEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHC
Q ss_conf 4799852581367530979999298598956935785029938999998508
Q 000503 1407 MTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1458 (1459)
Q Consensus 1407 ~TvI~IaHrl~ti~~~DrI~vl~~G~ivE~g~p~~Ll~~~~s~f~~l~~~~g 1458 (1459)
+|+|+||||++++.+||||+||++|+++|.|+|++|++++ |.|++|++.+.
T Consensus 1221 ~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~~-g~y~~l~~~q~ 1271 (1284)
T 3g5u_A 1221 RTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQK-GIYFSMVSVQA 1271 (1284)
T ss_dssp SCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHSC-SHHHHHHHHHC
T ss_pred CEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCC-CHHHHHHHHHH
T ss_conf 9899995587999809989999899899977899998477-77999999976
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=753.99 Aligned_cols=513 Identities=19% Similarity=0.243 Sum_probs=437.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 78999999999999999999999999999999999999999885386433135671158999960254420002699999
Q 000503 940 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNI 1019 (1459)
Q Consensus 940 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~l~~ 1019 (1459)
.+...+++++++..++.++..+.+.+.+.+...+++.++++++++.|++|||++++|+++||+++|++.+.+.+...+..
T Consensus 137 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 137 NVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999997889899879984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHH
Q ss_conf 99999867786647988878999999999999999999999999999999986304147678862144799975193899
Q 000503 1020 LLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDY 1099 (1459)
Q Consensus 1020 ~~~~~~~~i~~~~~i~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIRaf~~~~~ 1099 (1459)
++..++.+++.++++.+..|.++++.+..+.++..+..++.+..+...+......+...+++.|+++|+.+||+|++|+.
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 296 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRY 296 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999983999998214299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999998406888777721999999999999999999999
Q 000503 1100 FMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNF 1179 (1459)
Q Consensus 1100 ~~~~~~~~ld~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vglal~~~~~~~~~l~~l 1179 (1459)
+.+++.+..+...+..........+......++..+...++....... ...+.+++|.+..++.+...+..++..+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----v~~g~lt~g~~~~~~~~~~~~~~~l~~~ 372 (1321)
T 4f4c_A 297 ELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGW----VHDGSLNFGDMLTTFSSVMMGSMALGLA 372 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999999999----9959986999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCCEEEEEEEECCCEEEEECC
Q ss_conf 99999999998999999963038721112678999999998408999899996699-89520112499748919999889
Q 000503 1180 LSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGR 1258 (1459)
Q Consensus 1180 i~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGr 1258 (1459)
...+..+.....+.+|+.++.+.+++............+.+|.|+|+||+|+|+.. ..++|+|+||+|+|||++||||+
T Consensus 373 ~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~ 452 (1321)
T 4f4c_A 373 GPQLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGS 452 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEEC
T ss_conf 99999999999999999999717853456665565677888767999855407999987433331886228827899805
Q ss_pred CCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCCC-CCHHHHHHHHHHHC
Q ss_conf 99848999999843698998669997974899995777156289807776777547883186999-99277899999900
Q 000503 1259 TGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCH 1337 (1459)
Q Consensus 1259 TGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~ 1337 (1459)
||||||||+++|+|+++|++|+|.+||+|+++++++++|++++||||||++|+|||||||..+.+ .+|+++++|++.++
T Consensus 453 sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~ 532 (1321)
T 4f4c_A 453 SGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMAN 532 (1321)
T ss_dssp SSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 89857788887545651644861579965011259998504666587533207861678864155220999999998756
Q ss_pred HHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 99999968--9940541699999935999999999872499779985667698999799999999983599479985258
Q 000503 1338 VKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHR 1415 (1459)
Q Consensus 1338 L~~~i~~l--gLdt~i~e~G~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHr 1415 (1459)
++++|+.+ |+||.|+|+|.+||||||||++||||++++|+|+|||||||++|++||+.+++.|++..+++|+|+||||
T Consensus 533 l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHr 612 (1321)
T 4f4c_A 533 AEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHR 612 (1321)
T ss_dssp CHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSC
T ss_pred CHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 54688708888860755898877777879999999872599989984554468878999999999998479889997363
Q ss_pred HHHHHHCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHH
Q ss_conf 136753097999929859895693578502993899999850
Q 000503 1416 ISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1416 l~ti~~~DrI~vl~~G~ivE~g~p~~Ll~~~~s~f~~l~~~~ 1457 (1459)
++++.+||+|+||++|+|+|.|+|+||+++ ++.|++|++.+
T Consensus 613 ls~i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q 653 (1321)
T 4f4c_A 613 LSTIRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQ 653 (1321)
T ss_dssp TTTTTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHH
T ss_pred HHHHHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHH
T ss_conf 878986898999639965136899999985-32799999962
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=718.98 Aligned_cols=511 Identities=21% Similarity=0.258 Sum_probs=432.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 37899999999999999999999999999999999999999988538643313567115899996025442000269999
Q 000503 939 SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILN 1018 (1459)
Q Consensus 939 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~l~ 1018 (1459)
..|..+|++++++..++.+++.+.+.+.+.+...++|.+++++++++|++|||++++|+++||+++|++.+++.++..+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~ 187 (1284)
T 3g5u_A 108 TTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIG 187 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999869989975688778999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHH
Q ss_conf 99999986778664798887899999999999999999999999999999998630414767886214479997519389
Q 000503 1019 ILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSED 1098 (1459)
Q Consensus 1019 ~~~~~~~~~i~~~~~i~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIRaf~~~~ 1098 (1459)
.++..++.+++.++++.+..|.++++++....++..+..++.+..+...+....+.+++.+++.|+++|+.+||+|++|+
T Consensus 188 ~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~ 267 (1284)
T 3g5u_A 188 MFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQK 267 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999997879999846539
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999999---99999999840688877772199999999999999999
Q 000503 1099 YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII---SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSL 1175 (1459)
Q Consensus 1099 ~~~~~~~~~ld~~~~~~~~~~~~~~wl~~~l~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~g~vglal~~~~~~~~~ 1175 (1459)
.+.+++.+..+...+..........+......++..... ...+...+. .+..++|.+..++.+.+....+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-------~g~~~~g~~~~~~~~~~~~~~~ 340 (1284)
T 3g5u_A 268 KELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVI-------SKEYSIGQVLTVFFSVLIGAFS 340 (1284)
T ss_dssp SHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HSSSCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999999999999-------2998899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCCEEEEEEEECCCEEE
Q ss_conf 999999999999998999999963038721112678999999998408999899996699-8952011249974891999
Q 000503 1176 LGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVG 1254 (1459)
Q Consensus 1176 l~~li~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~Gekvg 1254 (1459)
+..+...+..+..+..+++|+.++.+.++|............+.+|.|+|+||+|+|+.. .+++|+|+||+|+|||++|
T Consensus 341 ~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ 420 (1284)
T 3g5u_A 341 VGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVA 420 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEE
T ss_conf 99999999999999999999999972898677666567777777771899998997699998710125458975998899
Q ss_pred EECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC-CCCHHHHHHHH
Q ss_conf 98899984899999984369899866999797489999577715628980777677754788318699-99927789999
Q 000503 1255 IVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVL 1333 (1459)
Q Consensus 1255 IvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL 1333 (1459)
||||||||||||+++|.|+++|++|+|.+||.|+++++.+++|+++++|||||++|+||||||+.++. ..+++++++++
T Consensus 421 ivG~sGsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~ 500 (1284)
T 3g5u_A 421 LVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAV 500 (1284)
T ss_dssp EECCSSSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH
T ss_conf 98999997999999980788999738999999877579999986548986887537766999974579899999999999
Q ss_pred HHHCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 990099999968--994054169999993599999999987249977998566769899979999999998359947998
Q 000503 1334 EKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVIT 1411 (1459)
Q Consensus 1334 ~~~~L~~~i~~l--gLdt~i~e~G~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~ 1411 (1459)
+.++++++++.+ |+||.++|.|.+||||||||+|||||++++|+|||||||||++|.+|++.+++.+++..+++|+|+
T Consensus 501 ~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~ 580 (1284)
T 3g5u_A 501 KEANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIV 580 (1284)
T ss_dssp HHTTCHHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 98296999974656334501478786599999999999999529998999798777799999999999999739998999
Q ss_pred ECCCHHHHHHCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHH
Q ss_conf 5258136753097999929859895693578502993899999850
Q 000503 1412 IAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1412 IaHrl~ti~~~DrI~vl~~G~ivE~g~p~~Ll~~~~s~f~~l~~~~ 1457 (1459)
||||++++.+||+|+||++|+++|.|+|++|++++ +.|++++..+
T Consensus 581 itH~l~~i~~~d~i~vl~~G~i~~~g~~~~l~~~~-~~~~~~~~~~ 625 (1284)
T 3g5u_A 581 IAHRLSTVRNADVIAGFDGGVIVEQGNHDELMREK-GIYFKLVMTQ 625 (1284)
T ss_dssp ECSCHHHHTTCSEEEECSSSCCCCEECHHHHHHTT-SHHHHHHHHT
T ss_pred EECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCC-CHHHHHHHHH
T ss_conf 94077899749989999899999978899998678-7799999974
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=686.44 Aligned_cols=561 Identities=25% Similarity=0.352 Sum_probs=468.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79998741458999999999999999985256565421034578888764137899999999999999999999999999
Q 000503 888 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 967 (1459)
Q Consensus 888 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 967 (1459)
....|++...+..... +++.++........+++++.+++.............++.+++++.++..++.+...+.....+
T Consensus 27 ~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (598)
T 3qf4_B 27 RLLGYLRPHTFTLIMV-FVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLS 105 (598)
T ss_dssp HHGGGTGGGHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999-999999999999999999999999973688899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999998853864331356711589999602544200026999999999986778664798887899999999
Q 000503 968 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1047 (1459)
Q Consensus 968 ~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~p 1047 (1459)
.+...++|.++++++++.|+.||+++++|+++||+++|++.+++.+...+..++...+.+++.++++.+..|+++++.+.
T Consensus 106 ~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~ 185 (598)
T 3qf4_B 106 QDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLS 185 (598)
T ss_dssp HHHHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999977999997688889999999999999999999999999999999999999999998999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999863041476788621447999751938999999999999999999999999999999
Q 000503 1048 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1127 (1459)
Q Consensus 1048 l~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIRaf~~~~~~~~~~~~~ld~~~~~~~~~~~~~~wl~~ 1127 (1459)
...++..+..++.+..++..+...+..+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+..........+...
T Consensus 186 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (598)
T 3qf4_B 186 IVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPP 265 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999997379999974870999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999984068887777219999999999999999999999999999999899999996303872111
Q 000503 1128 RLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEEL 1207 (1459)
Q Consensus 1128 ~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vglal~~~~~~~~~l~~li~~~~~~e~~~~sveRi~~~~~~~~E~~ 1207 (1459)
..+++..+...++........ ..+.+++|.+...+.++..+..++..+...+.+++....+++|+.++.+.++|..
T Consensus 266 ~~~~~~~~~~~~~~~~g~~l~----~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 341 (598)
T 3qf4_B 266 LMNMVNNLGFALISGFGGWLA----LKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKD 341 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG----GGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999999999999----8599789999999999999999999999999999999999999999976887777
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
Q ss_conf 26789999999984089998999966998952011249974891999988999848999999843698998669997974
Q 000503 1208 CGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN 1287 (1459)
Q Consensus 1208 ~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~d 1287 (1459)
.. ...+.++..|.|+++||+++|+++ +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.|
T Consensus 342 ~~--~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~ 418 (598)
T 3qf4_B 342 DP--DAVELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGID 418 (598)
T ss_dssp CS--SCCCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEE
T ss_pred CC--CCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEE
T ss_conf 77--777777777718999989977999-860122279986998899989999969999999945857998089999998
Q ss_pred CCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCCC-CCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHHHH
Q ss_conf 899995777156289807776777547883186999-9927789999990099999968--9940541699999935999
Q 000503 1288 IINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQ 1364 (1459)
Q Consensus 1288 i~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~~-~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G~~LS~GQrQ 1364 (1459)
+++++.+.+|+++++|||||.+|++|+|||+.++.. .++++++++++.+++.+.++.+ |+|+.++++|.+|||||||
T Consensus 419 i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Q 498 (598)
T 3qf4_B 419 IRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQ 498 (598)
T ss_dssp GGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHH
T ss_pred HHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHH
T ss_conf 30188999984108990798232463999974479999999999999996978889746453236422788987999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHC
Q ss_conf 99999987249977998566769899979999999998359947998525813675309799992985989569357850
Q 000503 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQ 1444 (1459)
Q Consensus 1365 ll~LARAlLr~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHrl~ti~~~DrI~vl~~G~ivE~g~p~~Ll~ 1444 (1459)
|++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+|+||++
T Consensus 499 rv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 578 (598)
T 3qf4_B 499 LLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQ 578 (598)
T ss_dssp HHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHH
T ss_conf 99999999649999999897667999999999999999808998999942778997199899998999998778999986
Q ss_pred CCCCHHHHHHHHH
Q ss_conf 2993899999850
Q 000503 1445 DECSVFSSFVRAS 1457 (1459)
Q Consensus 1445 ~~~s~f~~l~~~~ 1457 (1459)
++ +.|++++...
T Consensus 579 ~~-~~~~~~~~~~ 590 (598)
T 3qf4_B 579 KR-GFYYELFTSQ 590 (598)
T ss_dssp TT-CHHHHHHHHH
T ss_pred CC-CHHHHHHHHH
T ss_conf 78-7799999997
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=685.33 Aligned_cols=568 Identities=21% Similarity=0.282 Sum_probs=452.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64127879998741458999999999999999985256565421034578888764137899999999999999999999
Q 000503 882 GRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAF 961 (1459)
Q Consensus 882 g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 961 (1459)
|...++.++.|++...+.....+ ++.++..++....+++++++++.............+..+++++.++..++.++..+
T Consensus 7 g~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (587)
T 3qf4_A 7 GGGGSKTLARYLKPYWIFAVLAP-LFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCTV 85 (587)
T ss_dssp -CCCCCCGGGGTGGGHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85349999999999999999999-99999999999999999999999873698799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998853864331356711589999602544200026999999999986778664798887899
Q 000503 962 SFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFF 1041 (1459)
Q Consensus 962 ~~~~~~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~ 1041 (1459)
...+.+.+...++|.++++++++.|+.||+++++|+++||+++|++.+++.+...+..++...+.+++.++++.+..|.+
T Consensus 86 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 165 (587)
T 3qf4_A 86 FASYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKL 165 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999978897997658889999999999999999999999999999999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999863041476788621447999751938999999999999999999999999
Q 000503 1042 LLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTA 1121 (1459)
Q Consensus 1042 ~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIRaf~~~~~~~~~~~~~ld~~~~~~~~~~~~ 1121 (1459)
+++.+....++..+..++.+..+...+...+..+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+........
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 245 (587)
T 3qf4_A 166 SSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSL 245 (587)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998559999986214999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999-998406888777721999999999999999999999999999999989999999630
Q 000503 1122 SLWLSLRLQLLAAFIISFIATM-AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1200 (1459)
Q Consensus 1122 ~~wl~~~l~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~g~vglal~~~~~~~~~l~~li~~~~~~e~~~~sveRi~~~~ 1200 (1459)
..+......++..+...++... ..... .+.++.|.+..++.+...+..++..+...+..+.....+.+|+.++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~vl~~g~~~v~-----~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l 320 (587)
T 3qf4_A 246 IVFALPLFIFIVNMGMIAVLWFGGVLVR-----NNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVL 320 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999998-----49938999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 38721112678999999998408999899996699895201124997489199998899984899999984369899866
Q 000503 1201 DVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQ 1280 (1459)
Q Consensus 1201 ~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~ 1280 (1459)
+.+++..... .+.+.++..|.|+++||+++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+
T Consensus 321 ~~~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~ 399 (587)
T 3qf4_A 321 NEKPAIEEAD-NALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGR 399 (587)
T ss_dssp HCCCSCCCCT-TCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEE
T ss_pred CCCCCCCCCC-CCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
T ss_conf 6897657887-765668888807997889984899976421117998699889998999997999999992786699867
Q ss_pred EEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCC
Q ss_conf 999797489999577715628980777677754788318699-99927789999990099999968--994054169999
Q 000503 1281 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGIS 1357 (1459)
Q Consensus 1281 I~IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G~~ 1357 (1459)
|.+||+|+++++.+++|+++++|||||.+|++|+|||+.++. ..++++++++++.+++.++++.+ |+|+.+++.|.+
T Consensus 400 i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~ 479 (587)
T 3qf4_A 400 VEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRN 479 (587)
T ss_dssp EEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCS
T ss_pred EEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCC
T ss_conf 98999983407899998413897789867675599998524889999999999999684999975653121275189899
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEEC
Q ss_conf 99359999999998724997799856676989997999999999835994799852581367530979999298598956
Q 000503 1358 FSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQG 1437 (1459)
Q Consensus 1358 LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHrl~ti~~~DrI~vl~~G~ivE~g 1437 (1459)
||||||||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|
T Consensus 480 LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g 559 (587)
T 3qf4_A 480 FSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFG 559 (587)
T ss_dssp SCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEEC
T ss_conf 29999999999999972999999979754479999999999999867999899982276889819989999899899978
Q ss_pred CHHHHHCCCCCHHHHHHHHH
Q ss_conf 93578502993899999850
Q 000503 1438 NPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1438 ~p~~Ll~~~~s~f~~l~~~~ 1457 (1459)
+|+||++++ +.|+++++..
T Consensus 560 ~~~el~~~~-~~~~~~~~~~ 578 (587)
T 3qf4_A 560 THKELLEHC-KPYREIYESQ 578 (587)
T ss_dssp CHHHHHHHC-HHHHHHHHHH
T ss_pred CHHHHHHCC-CHHHHHHHHH
T ss_conf 899998678-3999999998
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=665.77 Aligned_cols=561 Identities=22% Similarity=0.344 Sum_probs=444.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CC-H----HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99987414589999999999999999852565654210345788887--64-1----37899999999999999999999
Q 000503 889 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTK--YS-T----SFYLVVLCIFCMFNSFLTLVRAF 961 (1459)
Q Consensus 889 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~--~~-~----~~~l~~~~~l~~~~~~~~~~~~~ 961 (1459)
+..|++...+.....+ ++.++........++.+++.++........ .. . ..+...+.++.++..++.+...+
T Consensus 5 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (578)
T 4a82_A 5 YLQFVKPYKYRIFATI-IVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQY 83 (578)
T ss_dssp HHHHHGGGHHHHHHHH-HHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999889999999999-999999999999999999999999816871146778888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998853864331356711589999602544200026999999999986778664798887899
Q 000503 962 SFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFF 1041 (1459)
Q Consensus 962 ~~~~~~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~ 1041 (1459)
...+.+.+...+++.++++++++.|+.||+++++|+++||+++|++.+++.+...+..++...+..++.++++.+..|++
T Consensus 84 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 163 (578)
T 4a82_A 84 LAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKL 163 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999987899997689869999999999999999999999999999999999999999996999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999863041476788621447999751938999999999999999999999999
Q 000503 1042 LLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTA 1121 (1459)
Q Consensus 1042 ~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIRaf~~~~~~~~~~~~~ld~~~~~~~~~~~~ 1121 (1459)
+++.+....++..+..++.+..++..+......+++.+++.|+++|+.+||+|++|+.+.+++.+..+...+........
T Consensus 164 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (578)
T 4a82_A 164 TLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRW 243 (578)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998249999981664999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999---99999999984068887777219999999999999999999999999999999899999996
Q 000503 1122 SLWLSLRLQLLAAFI---ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLE 1198 (1459)
Q Consensus 1122 ~~wl~~~l~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~g~vglal~~~~~~~~~l~~li~~~~~~e~~~~sveRi~~ 1198 (1459)
..+.....+.+..+. +...+...+. .+..++|.+..++.+...+..++..+...+.++.....+.+|+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~v~~~g~~~v~-------~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~ 316 (578)
T 4a82_A 244 NAYSFAAINTVTDIGPIIVIGVGAYLAI-------SGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQ 316 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999998-------599589999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 30387211126789999999984089998999966998952011249974891999988999848999999843698998
Q 000503 1199 YMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG 1278 (1459)
Q Consensus 1199 ~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~ 1278 (1459)
+.+.++|..... .+.+.++..|.|+++||+++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++
T Consensus 317 ~l~~~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~ 395 (578)
T 4a82_A 317 LIDEDYDIKNGV-GAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395 (578)
T ss_dssp HHTCCCSSCCCT-TCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSE
T ss_pred HHCCCCCCCCCC-CCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
T ss_conf 976897666787-7666677788079999999758999741343379987999999989999859999999846788999
Q ss_pred CEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCC
Q ss_conf 66999797489999577715628980777677754788318699-99927789999990099999968--9940541699
Q 000503 1279 GQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESG 1355 (1459)
Q Consensus 1279 G~I~IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G 1355 (1459)
|+|.+||.|+++++.+++|++++++||+|.+|++|+|||+..+. ..++++++++++.+++.++++.+ |+|+.++++|
T Consensus 396 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g 475 (578)
T 4a82_A 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERG 475 (578)
T ss_dssp EEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGG
T ss_pred CEEEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCC
T ss_conf 67999999844278999960068992898347645999985279998899999999880959999757330102530688
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEE
Q ss_conf 99993599999999987249977998566769899979999999998359947998525813675309799992985989
Q 000503 1356 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVE 1435 (1459)
Q Consensus 1356 ~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHrl~ti~~~DrI~vl~~G~ivE 1435 (1459)
.+||||||||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|
T Consensus 476 ~~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~ 555 (578)
T 4a82_A 476 VKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555 (578)
T ss_dssp TTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEE
T ss_conf 96799999999999999749999999786545799999999999999808997999831789997199899998998999
Q ss_pred ECCHHHHHCCCCCHHHHHHHHHCC
Q ss_conf 569357850299389999985089
Q 000503 1436 QGNPQTLLQDECSVFSSFVRASTM 1459 (1459)
Q Consensus 1436 ~g~p~~Ll~~~~s~f~~l~~~~g~ 1459 (1459)
.|+|+||++++ +.|+++++.+++
T Consensus 556 ~g~~~el~~~~-~~~~~~~~~q~~ 578 (578)
T 4a82_A 556 TGTHRELIAKQ-GAYEHLYSIQNL 578 (578)
T ss_dssp EECHHHHHHTT-SHHHHHHTTTTC
T ss_pred ECCHHHHHHCC-CHHHHHHHHHCC
T ss_conf 88899998588-389999985069
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=664.54 Aligned_cols=560 Identities=23% Similarity=0.315 Sum_probs=465.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7999874145899999999999999998525656542103457888876413789-999999999999999999999999
Q 000503 888 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYL-VVLCIFCMFNSFLTLVRAFSFAFG 966 (1459)
Q Consensus 888 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l-~~~~~l~~~~~~~~~~~~~~~~~~ 966 (1459)
.+..|++...+..... +++.++........+++++++++..... .......++ ..++++.++..++.+...+.....
T Consensus 15 ~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (582)
T 3b60_A 15 RLWPTIAPFKAGLIVA-GIALILNAASDTFMLSLLKPLLDDGFGK-TDRSVLLWMPLVVIGLMILRGITSYISSYCISWV 92 (582)
T ss_dssp HHHHHHGGGHHHHHHH-HHHHHHHHHHHHHHHHHHTHHHHSSTTS-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999-9999999999999999999999988436-8657999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999885386433135671158999960254420002699999999998677866479888789999999
Q 000503 967 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1046 (1459)
Q Consensus 967 ~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~ 1046 (1459)
+.+...+++.++++++++.|+.||+++++|+++||+++|++.++..+...+..++...+.+++.++++.+..|+++++.+
T Consensus 93 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l 172 (582)
T 3b60_A 93 SGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILV 172 (582)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998099999788986589999998799999999999999999999999999999998099999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999986304147678862144799975193899999999999999999999999999999
Q 000503 1047 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1126 (1459)
Q Consensus 1047 pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIRaf~~~~~~~~~~~~~ld~~~~~~~~~~~~~~wl~ 1126 (1459)
....++..+..++.+..++..+......+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+........+.|..
T Consensus 173 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3b60_A 173 VLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISD 252 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999961999998376899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999999999999998406888777721999999999999999999999999999999989999999630387211
Q 000503 1127 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1206 (1459)
Q Consensus 1127 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vglal~~~~~~~~~l~~li~~~~~~e~~~~sveRi~~~~~~~~E~ 1206 (1459)
...+++..+...++..... . ....+.+++|.+..++.++..+..++..+...+.++.....+++|+.++.+.++|.
T Consensus 253 ~~~~~~~~~~~~~~~~~g~---~-~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~ 328 (582)
T 3b60_A 253 PIIQLIASLALAFVLYAAS---F-PSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEK 328 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHH---S-SSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHH---H-HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999999999999999999---9-99849998999999999999999999999999999999999999999997599876
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 12678999999998408999899996699895201124997489199998899984899999984369899866999797
Q 000503 1207 LCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL 1286 (1459)
Q Consensus 1207 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~ 1286 (1459)
... +.+.++..|.|+++||+++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.
T Consensus 329 ~~~---~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b60_A 329 DEG---KRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGH 405 (582)
T ss_dssp CCC---CBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTE
T ss_pred CCC---CCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCE
T ss_conf 677---77777888847999889973999974415615997699989998999998999999986106898976979999
Q ss_pred ECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHH
Q ss_conf 489999577715628980777677754788318699--99927789999990099999968--99405416999999359
Q 000503 1287 NIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1362 (1459)
Q Consensus 1287 di~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~--~~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G~~LS~GQ 1362 (1459)
|+++++.+++|++++++||+|.+|++|+|||+.++. ..++++++++++.+++.++++.+ |+|+.+++.|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq 485 (582)
T 3b60_A 406 DLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQ 485 (582)
T ss_dssp ETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHH
T ss_pred ECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 82306999999608088068747787899998545999989999999999849799998450411451147988789999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999872499779985667698999799999999983599479985258136753097999929859895693578
Q 000503 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTL 1442 (1459)
Q Consensus 1363 rQll~LARAlLr~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHrl~ti~~~DrI~vl~~G~ivE~g~p~~L 1442 (1459)
|||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+|+||++++..||+|++|++|+++|.|+|++|
T Consensus 486 ~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b60_A 486 RQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSEL 565 (582)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997289989997865557989999999999999679979999454778985998999978889884589999
Q ss_pred HCCCCCHHHHHHHHH
Q ss_conf 502993899999850
Q 000503 1443 LQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1443 l~~~~s~f~~l~~~~ 1457 (1459)
++++ +.|+++++.+
T Consensus 566 ~~~~-~~~~~~~~~q 579 (582)
T 3b60_A 566 LAQH-GVYAQLHKMQ 579 (582)
T ss_dssp HHHT-SSHHHHHHHT
T ss_pred HHCC-CHHHHHHHHH
T ss_conf 8769-8899999975
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=660.64 Aligned_cols=560 Identities=23% Similarity=0.336 Sum_probs=463.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79998741458999999999999999985256565421034578888764137899-99999999999999999999999
Q 000503 888 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLV-VLCIFCMFNSFLTLVRAFSFAFG 966 (1459)
Q Consensus 888 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~-~~~~l~~~~~~~~~~~~~~~~~~ 966 (1459)
.+..|++...+..... +++.++........+++++++++..... .......++. .++++.++..++.+...+.....
T Consensus 15 ~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (582)
T 3b5x_A 15 RLWTYIRLYKAGLVVS-TIALVINAAADTYMISLLKPLLDEGFGN-AESNFLRILPFMILGLMFVRGLSGFASSYCLSWV 92 (582)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999988999999999-9999999999999999999999998646-8667999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999885386433135671158999960254420002699999999998677866479888789999999
Q 000503 967 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1046 (1459)
Q Consensus 967 ~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~ 1046 (1459)
+.+...+++.++++++++.|+.||+++++|++++|+++|++.+++.+...+..++...+.+++.++++.+..|+++++.+
T Consensus 93 ~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l 172 (582)
T 3b5x_A 93 SGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLI 172 (582)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998699999778987899999998899999999999999999999999999999998299999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999986304147678862144799975193899999999999999999999999999999
Q 000503 1047 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1126 (1459)
Q Consensus 1047 pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIRaf~~~~~~~~~~~~~ld~~~~~~~~~~~~~~wl~ 1126 (1459)
....++..+..++.+..++..+......+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+........+.|..
T Consensus 173 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3b5x_A 173 VVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIAD 252 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999951999997087599999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999999999999998406888777721999999999999999999999999999999989999999630387211
Q 000503 1127 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1206 (1459)
Q Consensus 1127 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vglal~~~~~~~~~l~~li~~~~~~e~~~~sveRi~~~~~~~~E~ 1206 (1459)
...+++..+...++........ ..+.+++|.+...+.++..+..++..+...+.++.....+.+|+.++.+.++|.
T Consensus 253 ~~~~~~~~~~~~~i~~~g~~~v----~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~ 328 (582)
T 3b5x_A 253 PVIQMIASLALFAVLFLASVDS----IRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETER 328 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999999999999999999999----859988999999999999999999999999999999999999999997589767
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 12678999999998408999899996699895201124997489199998899984899999984369899866999797
Q 000503 1207 LCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL 1286 (1459)
Q Consensus 1207 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~ 1286 (1459)
... +.+.++..|.|+++||+++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.
T Consensus 329 ~~~---~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b5x_A 329 DNG---KYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGH 405 (582)
T ss_pred CCC---CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf 777---77777788828999989972899865400416998799989998999997999999996577899987989999
Q ss_pred ECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHH
Q ss_conf 489999577715628980777677754788318699--99927789999990099999968--99405416999999359
Q 000503 1287 NIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1362 (1459)
Q Consensus 1287 di~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~--~~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G~~LS~GQ 1362 (1459)
|+.+.+.+.+|++++++||+|.+|++|++||+..+. ..++++++++++.+++.++++.+ |+|+.+++.|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq 485 (582)
T 3b5x_A 406 DVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQ 485 (582)
T ss_pred EHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHH
T ss_conf 85638899996485898279905310299998566889999999999999879899998476533451068888479999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999872499779985667698999799999999983599479985258136753097999929859895693578
Q 000503 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTL 1442 (1459)
Q Consensus 1363 rQll~LARAlLr~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHrl~ti~~~DrI~vl~~G~ivE~g~p~~L 1442 (1459)
|||++||||++++|+|++||||||++|+++++.+++.|++..+++|+|+|+||++++..||+|++|++|+++|.|+|++|
T Consensus 486 ~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b5x_A 486 RQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADL 565 (582)
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997499999997854468999999999999997289989999368899981998999989989997789999
Q ss_pred HCCCCCHHHHHHHHH
Q ss_conf 502993899999850
Q 000503 1443 LQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1443 l~~~~s~f~~l~~~~ 1457 (1459)
++++ +.|+++++.+
T Consensus 566 ~~~~-~~~~~~~~~q 579 (582)
T 3b5x_A 566 LAQD-GAYAQLHRIQ 579 (582)
T ss_pred HHCC-CHHHHHHHHH
T ss_conf 8488-5899999986
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=652.72 Aligned_cols=562 Identities=23% Similarity=0.280 Sum_probs=449.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9998741458999999999999999985256565421034578888-76--41378999999999999999999999999
Q 000503 889 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQT-KY--STSFYLVVLCIFCMFNSFLTLVRAFSFAF 965 (1459)
Q Consensus 889 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~~--~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 965 (1459)
+..|++...+.....+ ++.++........+++++++++....... .. ....+..+++++.++..++.+.+.+....
T Consensus 10 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (595)
T 2yl4_A 10 LLGLAYPERRRLAAAV-GFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQT 88 (595)
T ss_dssp HHHHHGGGHHHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999887899999999-999999999999999999999999735740266799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999988538643313567115899996025442000269999999999867786647988878999999
Q 000503 966 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1045 (1459)
Q Consensus 966 ~~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~ 1045 (1459)
.+.+...+++.++++++++.|+.||+++++|+++||+++|++.++..+...+..++..++.+++.++++.+..|+++++.
T Consensus 89 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~ 168 (595)
T 2yl4_A 89 SGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFV 168 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999819999977798488999999999999999999999999999999999999999819999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998630414767886214479997519389999999999999999999999999999
Q 000503 1046 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1125 (1459)
Q Consensus 1046 ~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIRaf~~~~~~~~~~~~~ld~~~~~~~~~~~~~~wl 1125 (1459)
+....++..+..++.+..+...+......+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+........+.|.
T Consensus 169 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (595)
T 2yl4_A 169 LSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGF 248 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999981199999837569999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999999999999-984068887777219999999999999999999999999999999899999996303872
Q 000503 1126 SLRLQLLAAFIISFIATMA-VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQ 1204 (1459)
Q Consensus 1126 ~~~l~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~g~vglal~~~~~~~~~l~~li~~~~~~e~~~~sveRi~~~~~~~~ 1204 (1459)
....+++..+....+.... .... .+.+++|.+..++.++..+..++..+...+.++.....+.+|+.++.+.++
T Consensus 249 ~~~~~~~~~~~~~~~~~~g~~~v~-----~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~ 323 (595)
T 2yl4_A 249 FGATGLSGNLIVLSVLYKGGLLMG-----SAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREP 323 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-----TTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999999999999999999999998-----699789999999999999999999999999999999999999999983897
Q ss_pred CCCCCCCCCCCCCCCCCC-EEEEEEEEEECCC-CCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 111267899999999840-8999899996699-89520112499748919999889998489999998436989986699
Q 000503 1205 EELCGYQSLSPDWPFQGL-IEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1282 (1459)
Q Consensus 1205 E~~~~~~~~~~~wp~~g~-I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ 1282 (1459)
|....... ++..+..|. |+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.
T Consensus 324 ~~~~~~~~-~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~ 402 (595)
T 2yl4_A 324 KLPFNEGV-ILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTIS 402 (595)
T ss_dssp SSCSSCSB-CCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEE
T ss_pred CCCCCCCC-CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 66777787-77767899838999889985899888120112799849988999899999799999998258578983799
Q ss_pred ECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCCC----CCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCC
Q ss_conf 97974899995777156289807776777547883186999----9927789999990099999968--99405416999
Q 000503 1283 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1356 (1459)
Q Consensus 1283 IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIR~NLdp~~~----~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G~ 1356 (1459)
+||.|+.+++.+.+|+++++|||+|.+|++|++||+..+.. .++++++++++.+++.++++.+ |+|+.+++.|.
T Consensus 403 ~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~ 482 (595)
T 2yl4_A 403 LDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGV 482 (595)
T ss_dssp ETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSC
T ss_pred ECCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 99998111799999732289836883268779999840587766568999999999869799997473201350168878
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEE
Q ss_conf 99935999999999872499779985667698999799999999983599479985258136753097999929859895
Q 000503 1357 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1436 (1459)
Q Consensus 1357 ~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHrl~ti~~~DrI~vl~~G~ivE~ 1436 (1459)
+||||||||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+|+||++++..||+|++|++|+++|.
T Consensus 483 ~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 562 (595)
T 2yl4_A 483 LLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEY 562 (595)
T ss_dssp CCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 68999999999999997599999998866689989999999999999659979999468789975998999989989997
Q ss_pred CCHHHHHCCCCCHHHHHHHHH
Q ss_conf 693578502993899999850
Q 000503 1437 GNPQTLLQDECSVFSSFVRAS 1457 (1459)
Q Consensus 1437 g~p~~Ll~~~~s~f~~l~~~~ 1457 (1459)
|+|++|++++++.|+++++.+
T Consensus 563 g~~~~l~~~~~~~~~~~~~~q 583 (595)
T 2yl4_A 563 GKHEELLSKPNGIYRKLMNKQ 583 (595)
T ss_dssp ECSCC------C---------
T ss_pred CCHHHHHHCCCHHHHHHHHHH
T ss_conf 889999747872999999974
Done!