Query 000504
Match_columns 1458
No_of_seqs 673 out of 5911
Neff 7.4
Searched_HMMs 46136
Date Mon Apr 1 17:04:26 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000504.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000504hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 1E-276 3E-281 2627.1 145.1 1235 201-1449 122-1380(1381)
2 PLN03130 ABC transporter C fam 100.0 7E-211 2E-215 2135.0 172.2 1414 8-1447 30-1477(1622)
3 PLN03232 ABC transporter C fam 100.0 7E-207 1E-211 2099.2 171.7 1415 8-1447 30-1474(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 7E-204 1E-208 2072.3 172.6 1232 199-1444 199-1520(1522)
5 TIGR01271 CFTR_protein cystic 100.0 7E-199 2E-203 2015.9 153.9 1234 201-1447 3-1455(1490)
6 PTZ00243 ABC transporter; Prov 100.0 3E-189 6E-194 1921.0 152.3 1242 200-1447 58-1549(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 2E-141 4E-146 1336.9 114.7 1080 333-1444 90-1225(1228)
8 PTZ00265 multidrug resistance 100.0 3E-130 7E-135 1328.5 141.6 1163 265-1444 50-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 1.3E-88 2.9E-93 816.4 62.7 567 876-1448 134-708 (716)
10 COG2274 SunT ABC-type bacterio 100.0 1.9E-81 4.1E-86 788.9 67.8 547 893-1444 156-708 (709)
11 COG1132 MdlB ABC-type multidru 100.0 4.6E-78 1E-82 765.7 68.8 543 896-1445 19-565 (567)
12 PRK11174 cysteine/glutathione 100.0 1.8E-76 3.9E-81 755.3 71.1 560 878-1445 11-585 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 2.2E-76 4.7E-81 765.2 68.9 552 879-1441 151-711 (711)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2E-75 4.4E-80 756.9 72.2 540 895-1443 140-684 (686)
15 PRK10790 putative multidrug tr 100.0 7.8E-75 1.7E-79 740.3 72.8 544 896-1447 28-578 (592)
16 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.1E-75 8.9E-80 757.3 70.3 559 877-1441 142-709 (710)
17 TIGR01193 bacteriocin_ABC ABC- 100.0 4.7E-75 1E-79 756.0 70.1 558 876-1442 143-707 (708)
18 PRK11176 lipid transporter ATP 100.0 6.9E-74 1.5E-78 731.1 70.8 542 898-1445 32-580 (582)
19 TIGR03375 type_I_sec_LssB type 100.0 1.3E-73 2.9E-78 740.7 71.3 549 877-1432 135-689 (694)
20 PRK11160 cysteine/glutathione 100.0 2E-73 4.4E-78 722.0 70.8 555 880-1442 7-572 (574)
21 TIGR02203 MsbA_lipidA lipid A 100.0 1.6E-72 3.6E-77 717.5 70.6 543 896-1444 19-568 (571)
22 TIGR01846 type_I_sec_HlyB type 100.0 4.3E-72 9.3E-77 726.1 71.9 561 876-1444 126-692 (694)
23 COG4988 CydD ABC-type transpor 100.0 3.1E-72 6.8E-77 664.9 63.7 514 928-1446 41-557 (559)
24 COG4987 CydC ABC-type transpor 100.0 4.5E-72 9.7E-77 650.9 60.5 494 942-1442 73-571 (573)
25 KOG0055 Multidrug/pheromone ex 100.0 1.6E-73 3.4E-78 721.3 49.9 513 927-1445 71-589 (1228)
26 TIGR02868 CydC thiol reductant 100.0 2.7E-71 5.9E-76 699.0 65.2 505 896-1403 18-529 (529)
27 PRK13657 cyclic beta-1,2-gluca 100.0 1.4E-70 3.1E-75 700.1 72.3 548 893-1445 21-571 (588)
28 TIGR02204 MsbA_rel ABC transpo 100.0 1.3E-70 2.9E-75 700.4 70.6 561 878-1443 7-574 (576)
29 KOG0056 Heavy metal exporter H 100.0 3.7E-73 8.1E-78 641.0 38.2 542 904-1450 228-780 (790)
30 TIGR01192 chvA glucan exporter 100.0 3E-69 6.6E-74 684.7 72.1 561 880-1448 10-574 (585)
31 PRK10789 putative multidrug tr 100.0 1.1E-69 2.5E-74 687.7 67.0 510 931-1446 40-552 (569)
32 TIGR02857 CydD thiol reductant 100.0 4.4E-69 9.5E-74 678.9 65.5 514 897-1415 9-529 (529)
33 KOG0057 Mitochondrial Fe/S clu 100.0 3.9E-69 8.6E-74 626.3 56.6 510 927-1444 74-586 (591)
34 PRK11174 cysteine/glutathione 100.0 2E-66 4.3E-71 662.9 72.5 539 266-820 13-583 (588)
35 TIGR01842 type_I_sec_PrtD type 100.0 1.7E-66 3.6E-71 656.4 67.8 523 897-1431 12-542 (544)
36 PTZ00265 multidrug resistance 100.0 6.9E-67 1.5E-71 710.2 68.5 512 929-1444 99-728 (1466)
37 COG5265 ATM1 ABC-type transpor 100.0 1.9E-68 4.2E-73 601.2 39.5 487 948-1442 3-496 (497)
38 COG1123 ATPase components of v 100.0 1.1E-66 2.5E-71 621.4 45.6 465 590-1443 5-531 (539)
39 PRK10261 glutathione transport 100.0 3E-66 6.4E-71 660.0 49.8 483 589-1442 11-565 (623)
40 KOG0058 Peptide exporter, ABC 100.0 4.5E-64 9.7E-69 604.6 63.5 540 268-821 140-704 (716)
41 TIGR01194 cyc_pep_trnsptr cycl 100.0 2.8E-64 6.1E-69 636.1 64.0 516 897-1423 24-551 (555)
42 PRK15134 microcin C ABC transp 100.0 1.8E-65 3.8E-70 644.5 46.5 449 590-1434 5-518 (529)
43 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.3E-63 9.3E-68 644.7 70.3 535 267-817 146-708 (710)
44 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.2E-62 2.7E-67 637.5 72.5 537 265-819 126-683 (686)
45 TIGR03375 type_I_sec_LssB type 100.0 1.4E-62 3.1E-67 637.7 72.3 530 265-808 137-688 (694)
46 TIGR00958 3a01208 Conjugate Tr 100.0 1.6E-62 3.6E-67 635.8 71.9 531 270-815 156-708 (711)
47 COG2274 SunT ABC-type bacterio 100.0 2.2E-62 4.8E-67 616.5 70.7 541 264-819 143-706 (709)
48 TIGR00956 3a01205 Pleiotropic 100.0 3.2E-64 6.8E-69 684.3 57.5 250 1164-1427 715-989 (1394)
49 PRK13549 xylose transporter AT 100.0 5.2E-65 1.1E-69 636.9 44.9 442 590-1430 5-493 (506)
50 PRK09700 D-allose transporter 100.0 6.6E-65 1.4E-69 637.0 43.8 436 590-1428 5-495 (510)
51 TIGR03269 met_CoM_red_A2 methy 100.0 1.4E-64 3E-69 635.6 45.8 219 1207-1431 279-517 (520)
52 PRK15064 ABC transporter ATP-b 100.0 5.5E-64 1.2E-68 631.1 50.8 201 1206-1432 318-526 (530)
53 PRK10762 D-ribose transporter 100.0 3.6E-64 7.8E-69 628.6 43.6 431 590-1430 4-483 (501)
54 PRK11176 lipid transporter ATP 100.0 3.6E-61 7.7E-66 614.2 71.9 539 267-819 17-577 (582)
55 PRK15439 autoinducer 2 ABC tra 100.0 5.7E-64 1.2E-68 627.1 44.4 445 590-1432 11-493 (510)
56 TIGR02203 MsbA_lipidA lipid A 100.0 5E-61 1.1E-65 612.0 72.2 538 267-818 6-565 (571)
57 TIGR02633 xylG D-xylose ABC tr 100.0 1.1E-63 2.5E-68 624.7 45.4 437 591-1429 2-490 (500)
58 TIGR01193 bacteriocin_ABC ABC- 100.0 7.6E-61 1.6E-65 622.9 71.9 532 268-818 149-706 (708)
59 PRK10790 putative multidrug tr 100.0 2.3E-60 5.1E-65 607.2 74.7 538 268-821 16-575 (592)
60 PRK11288 araG L-arabinose tran 100.0 4.2E-63 9.1E-68 619.0 46.3 433 590-1430 4-484 (501)
61 TIGR01257 rim_protein retinal- 100.0 2.7E-60 5.7E-65 640.7 76.7 216 1205-1432 1935-2160(2272)
62 PRK10522 multidrug transporter 100.0 1E-60 2.2E-65 603.8 65.6 471 933-1424 54-531 (547)
63 PRK10982 galactose/methyl gala 100.0 1.1E-62 2.4E-67 614.1 45.8 433 594-1430 2-479 (491)
64 PLN03232 ABC transporter C fam 100.0 1E-60 2.2E-65 656.8 68.7 474 952-1445 366-841 (1495)
65 PRK11819 putative ABC transpor 100.0 9.4E-62 2E-66 612.7 53.3 483 589-1432 5-534 (556)
66 TIGR02204 MsbA_rel ABC transpo 100.0 8.6E-60 1.9E-64 601.1 71.5 541 266-818 9-572 (576)
67 PLN03130 ABC transporter C fam 100.0 1.6E-60 3.4E-65 654.1 68.1 473 952-1445 366-841 (1622)
68 PRK10938 putative molybdenum t 100.0 1.1E-62 2.4E-67 614.4 42.7 439 590-1425 3-486 (490)
69 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.6E-61 3.5E-66 610.7 52.9 481 590-1431 4-531 (552)
70 TIGR01842 type_I_sec_PrtD type 100.0 1.2E-59 2.6E-64 594.0 69.3 521 271-808 2-542 (544)
71 PRK13657 cyclic beta-1,2-gluca 100.0 2.8E-59 6E-64 596.4 72.8 533 269-820 13-569 (588)
72 PRK10789 putative multidrug tr 100.0 2.1E-59 4.6E-64 593.9 70.8 524 285-820 5-549 (569)
73 TIGR02868 CydC thiol reductant 100.0 1.5E-59 3.2E-64 592.3 68.1 499 268-780 6-529 (529)
74 PRK11160 cysteine/glutathione 100.0 1.1E-58 2.3E-63 587.7 72.0 537 269-818 10-571 (574)
75 COG4172 ABC-type uncharacteriz 100.0 2.4E-61 5.3E-66 538.9 40.6 457 589-1440 5-525 (534)
76 PRK10636 putative ABC transpor 100.0 1.5E-60 3.3E-65 607.7 52.0 200 1207-1431 312-517 (638)
77 TIGR01846 type_I_sec_HlyB type 100.0 2E-58 4.3E-63 598.5 72.3 540 266-819 130-690 (694)
78 TIGR01192 chvA glucan exporter 100.0 2.5E-57 5.4E-62 575.8 72.9 532 269-819 13-568 (585)
79 TIGR02857 CydD thiol reductant 100.0 1.1E-57 2.4E-62 575.3 67.5 506 274-792 2-529 (529)
80 COG1132 MdlB ABC-type multidru 100.0 2.8E-57 6E-62 575.6 70.9 530 273-821 13-564 (567)
81 PRK11147 ABC transporter ATPas 100.0 3.8E-59 8.3E-64 596.6 52.1 200 1207-1431 319-528 (635)
82 COG4988 CydD ABC-type transpor 100.0 1.2E-56 2.7E-61 532.2 66.0 523 279-821 4-555 (559)
83 PLN03073 ABC transporter F fam 100.0 5.3E-58 1.2E-62 584.8 52.2 199 1206-1429 507-712 (718)
84 COG0488 Uup ATPase components 100.0 3.2E-58 7E-63 561.9 46.3 485 590-1432 3-526 (530)
85 PLN03140 ABC transporter G fam 100.0 8.6E-57 1.9E-61 608.2 60.7 211 1207-1427 867-1106(1470)
86 COG4618 ArpD ABC-type protease 100.0 8.1E-57 1.8E-61 518.0 49.6 486 937-1432 73-561 (580)
87 TIGR00957 MRP_assoc_pro multi 100.0 2E-55 4.3E-60 605.3 70.3 529 898-1445 324-863 (1522)
88 TIGR00954 3a01203 Peroxysomal 100.0 8.6E-55 1.9E-59 556.9 58.9 509 892-1417 97-653 (659)
89 PRK13409 putative ATPase RIL; 100.0 1.3E-56 2.7E-61 563.3 40.9 191 1207-1425 340-536 (590)
90 KOG0057 Mitochondrial Fe/S clu 100.0 1.1E-53 2.4E-58 497.5 57.7 515 288-817 43-582 (591)
91 KOG0054 Multidrug resistance-a 100.0 3E-53 6.5E-58 550.5 63.8 476 952-1445 267-744 (1381)
92 COG4987 CydC ABC-type transpor 100.0 1E-52 2.2E-57 489.4 60.6 461 344-818 84-570 (573)
93 PTZ00243 ABC transporter; Prov 100.0 2.3E-52 4.9E-57 573.2 70.4 458 353-821 1033-1546(1560)
94 TIGR01194 cyc_pep_trnsptr cycl 100.0 7.3E-52 1.6E-56 523.2 62.8 508 269-800 11-551 (555)
95 TIGR01271 CFTR_protein cystic 100.0 1.4E-51 3.1E-56 565.3 66.7 477 941-1442 136-646 (1490)
96 COG1129 MglA ABC-type sugar tr 100.0 4.1E-53 8.9E-58 502.4 41.8 441 589-1427 7-486 (500)
97 COG4618 ArpD ABC-type protease 100.0 8.1E-51 1.8E-55 468.5 54.6 525 263-808 11-560 (580)
98 PRK10522 multidrug transporter 100.0 2.6E-50 5.7E-55 509.0 64.1 500 265-800 3-530 (547)
99 KOG0056 Heavy metal exporter H 100.0 3.2E-52 6.9E-57 471.5 40.3 524 283-820 223-773 (790)
100 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.4E-53 5.1E-58 487.0 27.9 238 1206-1445 1-238 (275)
101 COG3845 ABC-type uncharacteriz 100.0 8.8E-51 1.9E-55 470.9 39.2 439 589-1428 3-489 (501)
102 TIGR00954 3a01203 Peroxysomal 100.0 6.5E-48 1.4E-52 493.6 61.3 501 276-794 97-653 (659)
103 PRK14257 phosphate ABC transpo 100.0 2.2E-49 4.7E-54 465.7 26.6 258 1171-1435 35-317 (329)
104 COG5265 ATM1 ABC-type transpor 100.0 1.4E-45 3.1E-50 416.4 39.4 448 356-816 20-493 (497)
105 KOG0927 Predicted transporter 100.0 9.1E-47 2E-51 437.4 26.0 194 1207-1424 389-588 (614)
106 COG1126 GlnQ ABC-type polar am 100.0 6E-45 1.3E-49 381.7 21.9 217 1207-1436 2-230 (240)
107 cd03288 ABCC_SUR2 The SUR doma 100.0 4E-44 8.6E-49 409.9 29.6 240 1204-1443 16-255 (257)
108 COG1135 AbcC ABC-type metal io 100.0 1.5E-44 3.2E-49 397.0 21.8 224 1208-1442 2-243 (339)
109 KOG0062 ATPase component of AB 100.0 2.4E-43 5.1E-48 407.0 28.4 193 1205-1423 360-560 (582)
110 cd03252 ABCC_Hemolysin The ABC 100.0 4.3E-43 9.3E-48 397.1 27.6 234 1208-1442 1-235 (237)
111 cd03244 ABCC_MRP_domain2 Domai 100.0 6.9E-43 1.5E-47 391.3 26.9 221 1206-1426 1-221 (221)
112 PRK14257 phosphate ABC transpo 100.0 5.3E-43 1.2E-47 411.6 24.9 260 525-808 23-313 (329)
113 COG1117 PstB ABC-type phosphat 100.0 2.2E-43 4.7E-48 367.6 18.3 220 1206-1434 6-240 (253)
114 COG1125 OpuBA ABC-type proline 100.0 1.1E-42 2.3E-47 370.7 19.9 218 1208-1438 2-232 (309)
115 cd03251 ABCC_MsbA MsbA is an e 100.0 1.3E-41 2.8E-46 384.4 27.1 231 1208-1439 1-232 (234)
116 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.7E-41 3.6E-46 376.1 25.8 207 1202-1426 1-207 (207)
117 cd03254 ABCC_Glucan_exporter_l 100.0 2.1E-41 4.5E-46 381.4 26.4 226 1206-1432 1-227 (229)
118 cd03253 ABCC_ATM1_transporter 100.0 3.9E-41 8.4E-46 381.0 27.8 233 1208-1442 1-234 (236)
119 TIGR02314 ABC_MetN D-methionin 100.0 2.9E-41 6.3E-46 397.4 25.2 219 1208-1437 2-236 (343)
120 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 7.4E-41 1.6E-45 379.1 27.3 232 1208-1440 1-234 (238)
121 COG1120 FepC ABC-type cobalami 100.0 2.3E-41 4.9E-46 374.6 22.4 213 1207-1432 2-229 (258)
122 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.6E-41 5.6E-46 372.0 22.2 209 1207-1432 4-228 (254)
123 cd03245 ABCC_bacteriocin_expor 100.0 7.9E-41 1.7E-45 374.3 26.4 219 1206-1424 1-220 (220)
124 KOG0065 Pleiotropic drug resis 100.0 7.4E-40 1.6E-44 414.3 38.1 199 1220-1428 802-1018(1391)
125 COG1124 DppF ABC-type dipeptid 100.0 1.1E-40 2.3E-45 357.5 22.6 225 1207-1442 3-242 (252)
126 cd03260 ABC_PstB_phosphate_tra 100.0 1E-40 2.3E-45 375.1 22.7 211 1208-1429 1-227 (227)
127 COG1127 Ttg2A ABC-type transpo 100.0 1.4E-40 3.1E-45 354.1 22.0 224 1205-1441 6-245 (263)
128 PRK13631 cbiO cobalt transport 100.0 1.5E-40 3.3E-45 389.8 24.5 218 1205-1432 19-266 (320)
129 COG1126 GlnQ ABC-type polar am 100.0 1.6E-40 3.4E-45 348.5 21.0 202 590-811 2-228 (240)
130 cd03261 ABC_Org_Solvent_Resist 100.0 2.4E-40 5.2E-45 374.2 23.7 212 1208-1432 1-227 (235)
131 COG1122 CbiO ABC-type cobalt t 100.0 1.7E-40 3.7E-45 368.5 21.8 215 1207-1433 3-230 (235)
132 COG3839 MalK ABC-type sugar tr 100.0 2.2E-40 4.8E-45 380.2 23.3 216 1207-1437 3-229 (338)
133 PRK14250 phosphate ABC transpo 100.0 7.1E-40 1.5E-44 371.4 26.4 221 1207-1440 3-230 (241)
134 PRK14269 phosphate ABC transpo 100.0 6.1E-40 1.3E-44 373.2 25.8 219 1207-1434 2-233 (246)
135 PRK13650 cbiO cobalt transport 100.0 5.7E-40 1.2E-44 379.7 24.3 215 1207-1432 4-230 (279)
136 cd03248 ABCC_TAP TAP, the Tran 100.0 6.5E-40 1.4E-44 368.4 24.1 217 1204-1420 8-226 (226)
137 COG4178 ABC-type uncharacteriz 100.0 5.8E-37 1.3E-41 371.1 50.9 467 928-1417 87-588 (604)
138 PRK11153 metN DL-methionine tr 100.0 7.6E-40 1.7E-44 388.2 24.9 221 1208-1439 2-238 (343)
139 COG1136 SalX ABC-type antimicr 100.0 1.4E-39 3E-44 353.6 24.1 204 1208-1422 2-222 (226)
140 cd03263 ABC_subfamily_A The AB 100.0 7.6E-40 1.6E-44 366.4 22.8 210 1208-1429 1-219 (220)
141 PRK11650 ugpC glycerol-3-phosp 100.0 1.5E-39 3.2E-44 386.1 26.3 218 1207-1438 3-231 (356)
142 COG3638 ABC-type phosphate/pho 100.0 7.6E-40 1.6E-44 347.7 20.8 212 1207-1430 3-236 (258)
143 PRK13637 cbiO cobalt transport 100.0 1.2E-39 2.6E-44 378.2 23.8 214 1208-1432 3-235 (287)
144 PRK10744 pstB phosphate transp 100.0 2.9E-39 6.3E-44 370.6 26.5 222 1205-1435 11-248 (260)
145 PRK11432 fbpC ferric transport 100.0 1.8E-39 3.9E-44 384.3 25.5 217 1206-1437 5-232 (351)
146 PRK14273 phosphate ABC transpo 100.0 1.9E-39 4.1E-44 371.1 24.8 222 1207-1437 7-244 (254)
147 PRK13647 cbiO cobalt transport 100.0 1.5E-39 3.2E-44 375.2 24.0 212 1207-1430 4-226 (274)
148 cd03250 ABCC_MRP_domain1 Domai 100.0 2.1E-39 4.5E-44 358.5 24.2 199 1208-1419 1-204 (204)
149 COG2884 FtsE Predicted ATPase 100.0 5.4E-40 1.2E-44 336.5 17.7 207 1208-1426 2-221 (223)
150 PRK13635 cbiO cobalt transport 100.0 1.9E-39 4.1E-44 375.1 24.6 215 1207-1432 5-230 (279)
151 cd03296 ABC_CysA_sulfate_impor 100.0 2.7E-39 5.8E-44 366.5 25.1 212 1208-1434 3-229 (239)
152 TIGR00972 3a0107s01c2 phosphat 100.0 2.7E-39 5.8E-44 368.3 25.2 221 1208-1437 2-238 (247)
153 TIGR00960 3a0501s02 Type II (G 100.0 1.1E-39 2.3E-44 364.2 21.5 202 1208-1420 2-216 (216)
154 PRK14242 phosphate transporter 100.0 2.7E-39 5.9E-44 369.6 25.2 219 1207-1434 6-240 (253)
155 cd03256 ABC_PhnC_transporter A 100.0 1.7E-39 3.8E-44 368.7 23.2 211 1208-1430 1-233 (241)
156 cd03219 ABC_Mj1267_LivG_branch 100.0 1.6E-39 3.5E-44 367.7 22.8 212 1208-1432 1-233 (236)
157 cd03258 ABC_MetN_methionine_tr 100.0 2.1E-39 4.5E-44 366.1 23.2 214 1208-1432 2-231 (233)
158 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.4E-39 5.1E-44 367.6 23.4 217 1208-1434 1-228 (242)
159 TIGR03265 PhnT2 putative 2-ami 100.0 2.2E-39 4.7E-44 384.2 24.0 217 1207-1438 4-231 (353)
160 PRK14247 phosphate ABC transpo 100.0 3.8E-39 8.3E-44 367.8 25.1 222 1207-1437 3-240 (250)
161 TIGR01186 proV glycine betaine 100.0 1.7E-39 3.7E-44 384.2 22.6 206 1222-1438 6-226 (363)
162 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.5E-38 3.1E-43 366.2 29.4 219 1205-1441 37-256 (282)
163 PRK14259 phosphate ABC transpo 100.0 6.4E-39 1.4E-43 369.1 26.5 223 1203-1434 9-256 (269)
164 TIGR02315 ABC_phnC phosphonate 100.0 2.9E-39 6.3E-44 367.3 23.3 211 1208-1430 2-234 (243)
165 PRK14267 phosphate ABC transpo 100.0 4E-39 8.7E-44 368.3 24.2 219 1207-1434 4-240 (253)
166 PRK14235 phosphate transporter 100.0 6.3E-39 1.4E-43 369.0 25.9 222 1204-1434 16-254 (267)
167 PRK13646 cbiO cobalt transport 100.0 3.7E-39 7.9E-44 374.2 24.1 215 1208-1432 3-236 (286)
168 PRK13643 cbiO cobalt transport 100.0 3.9E-39 8.6E-44 374.1 24.2 214 1208-1432 2-234 (288)
169 PRK13632 cbiO cobalt transport 100.0 6.1E-39 1.3E-43 369.9 25.4 215 1207-1432 7-232 (271)
170 COG4615 PvdE ABC-type sideroph 100.0 1.9E-36 4.2E-41 338.0 44.2 471 928-1424 49-530 (546)
171 cd03259 ABC_Carb_Solutes_like 100.0 2.7E-39 5.9E-44 360.0 21.5 202 1208-1424 1-213 (213)
172 PRK11629 lolD lipoprotein tran 100.0 4.8E-39 1E-43 363.0 23.6 208 1207-1425 5-228 (233)
173 PRK10851 sulfate/thiosulfate t 100.0 6.7E-39 1.4E-43 380.1 25.9 216 1207-1437 2-232 (353)
174 PRK13636 cbiO cobalt transport 100.0 5.6E-39 1.2E-43 372.2 24.4 214 1207-1432 5-232 (283)
175 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7E-39 1.5E-43 362.4 24.5 211 1208-1432 2-222 (236)
176 cd03247 ABCC_cytochrome_bd The 100.0 4.4E-39 9.6E-44 347.9 21.8 178 1208-1424 1-178 (178)
177 cd03224 ABC_TM1139_LivF_branch 100.0 4E-39 8.6E-44 361.1 22.0 212 1208-1431 1-221 (222)
178 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.1E-39 8.8E-44 370.8 22.6 217 1209-1438 26-257 (269)
179 cd03266 ABC_NatA_sodium_export 100.0 5.6E-39 1.2E-43 358.9 22.4 205 1208-1424 2-218 (218)
180 PRK13640 cbiO cobalt transport 100.0 1.3E-38 2.8E-43 368.9 26.1 216 1206-1432 4-233 (282)
181 PRK14245 phosphate ABC transpo 100.0 7.7E-39 1.7E-43 365.2 23.8 220 1207-1435 3-238 (250)
182 PRK14244 phosphate ABC transpo 100.0 4.5E-39 9.7E-44 367.4 21.9 221 1208-1437 6-243 (251)
183 COG1116 TauB ABC-type nitrate/ 100.0 7E-39 1.5E-43 347.4 22.1 219 1207-1446 3-239 (248)
184 PRK10619 histidine/lysine/argi 100.0 1.1E-38 2.4E-43 365.3 25.1 218 1205-1434 3-244 (257)
185 PRK15079 oligopeptide ABC tran 100.0 1.2E-38 2.7E-43 375.0 26.1 223 1207-1439 8-259 (331)
186 PRK14268 phosphate ABC transpo 100.0 8.3E-39 1.8E-43 366.4 23.9 222 1207-1437 12-248 (258)
187 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.3E-39 9.3E-44 359.8 21.0 202 1208-1420 1-218 (218)
188 PRK11308 dppF dipeptide transp 100.0 1.2E-38 2.7E-43 374.7 25.8 225 1207-1441 5-254 (327)
189 TIGR03258 PhnT 2-aminoethylpho 100.0 7E-39 1.5E-43 380.3 23.9 218 1205-1437 3-234 (362)
190 PRK14251 phosphate ABC transpo 100.0 9E-39 2E-43 364.9 23.8 222 1207-1437 4-241 (251)
191 PRK11000 maltose/maltodextrin 100.0 8.6E-39 1.9E-43 382.1 24.6 216 1207-1437 3-229 (369)
192 PRK14237 phosphate transporter 100.0 1.6E-38 3.5E-43 365.6 25.9 220 1206-1434 19-254 (267)
193 cd03265 ABC_DrrA DrrA is the A 100.0 9.7E-39 2.1E-43 357.4 23.5 208 1208-1429 1-219 (220)
194 PRK13537 nodulation ABC transp 100.0 7.5E-39 1.6E-43 374.1 23.5 213 1206-1432 6-228 (306)
195 PRK09452 potA putrescine/sperm 100.0 1.3E-38 2.8E-43 379.3 25.9 217 1206-1437 13-240 (375)
196 PRK09536 btuD corrinoid ABC tr 100.0 9.4E-39 2E-43 382.3 24.7 213 1207-1432 3-229 (402)
197 PRK13642 cbiO cobalt transport 100.0 1.3E-38 2.9E-43 368.1 25.1 215 1207-1432 4-230 (277)
198 cd03226 ABC_cobalt_CbiO_domain 100.0 7.2E-39 1.6E-43 354.4 21.9 198 1209-1421 1-205 (205)
199 PRK13652 cbiO cobalt transport 100.0 1.3E-38 2.8E-43 368.2 24.7 213 1208-1432 4-228 (277)
200 PRK14262 phosphate ABC transpo 100.0 1.1E-38 2.5E-43 363.9 23.8 224 1207-1439 3-242 (250)
201 PRK13651 cobalt transporter AT 100.0 1.2E-38 2.6E-43 371.6 24.5 215 1207-1432 2-255 (305)
202 TIGR03005 ectoine_ehuA ectoine 100.0 1.6E-38 3.4E-43 363.1 24.9 217 1208-1437 1-242 (252)
203 PRK13644 cbiO cobalt transport 100.0 1.5E-38 3.1E-43 367.0 24.8 213 1208-1432 2-225 (274)
204 PRK11831 putative ABC transpor 100.0 2.2E-38 4.8E-43 364.8 26.2 223 1207-1442 7-244 (269)
205 cd03264 ABC_drug_resistance_li 100.0 8.1E-39 1.7E-43 355.7 21.7 202 1208-1424 1-211 (211)
206 PRK13634 cbiO cobalt transport 100.0 1E-38 2.2E-43 371.0 23.6 215 1208-1432 3-236 (290)
207 PRK14239 phosphate transporter 100.0 1.4E-38 3.1E-43 363.6 24.3 219 1207-1434 5-239 (252)
208 cd03268 ABC_BcrA_bacitracin_re 100.0 1.1E-38 2.4E-43 353.9 22.7 202 1208-1424 1-208 (208)
209 PRK14274 phosphate ABC transpo 100.0 2.1E-38 4.6E-43 363.4 25.7 221 1207-1436 12-248 (259)
210 PRK14266 phosphate ABC transpo 100.0 1.7E-38 3.7E-43 362.5 24.7 223 1207-1438 3-241 (250)
211 PRK14256 phosphate ABC transpo 100.0 2.2E-38 4.8E-43 361.9 25.7 224 1205-1437 2-242 (252)
212 TIGR03411 urea_trans_UrtD urea 100.0 1.3E-38 2.7E-43 361.8 23.4 211 1208-1431 3-231 (242)
213 TIGR02769 nickel_nikE nickel i 100.0 2.2E-38 4.8E-43 364.2 25.6 224 1208-1441 3-250 (265)
214 PRK14240 phosphate transporter 100.0 2.2E-38 4.7E-43 361.6 25.1 222 1206-1436 2-239 (250)
215 PRK14249 phosphate ABC transpo 100.0 2.8E-38 6.1E-43 360.8 25.9 219 1207-1434 4-238 (251)
216 COG3840 ThiQ ABC-type thiamine 100.0 1E-38 2.3E-43 323.8 19.7 210 1208-1434 2-222 (231)
217 PRK14260 phosphate ABC transpo 100.0 2E-38 4.3E-43 363.5 24.6 221 1206-1435 6-247 (259)
218 PRK13633 cobalt transporter AT 100.0 2E-38 4.3E-43 367.2 24.8 215 1207-1432 4-234 (280)
219 PRK13648 cbiO cobalt transport 100.0 1.4E-38 3.1E-43 366.6 23.5 215 1207-1432 7-232 (269)
220 TIGR02211 LolD_lipo_ex lipopro 100.0 1.9E-38 4.2E-43 355.3 23.9 203 1208-1421 2-220 (221)
221 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.6E-38 5.6E-43 362.8 25.3 221 590-820 2-236 (275)
222 cd03290 ABCC_SUR1_N The SUR do 100.0 2.3E-38 4.9E-43 353.9 24.1 210 1209-1419 2-218 (218)
223 PRK11124 artP arginine transpo 100.0 2E-38 4.3E-43 360.1 24.0 213 1208-1433 3-232 (242)
224 PRK14248 phosphate ABC transpo 100.0 2.9E-38 6.3E-43 364.0 25.6 219 1207-1434 21-255 (268)
225 PRK09493 glnQ glutamine ABC tr 100.0 2.1E-38 4.5E-43 359.5 23.9 213 1208-1433 2-227 (240)
226 COG3842 PotA ABC-type spermidi 100.0 9E-39 2E-43 368.8 21.1 218 1206-1438 4-233 (352)
227 cd03218 ABC_YhbG The ABC trans 100.0 1.5E-38 3.2E-43 359.0 22.4 211 1208-1431 1-222 (232)
228 cd03225 ABC_cobalt_CbiO_domain 100.0 1E-38 2.2E-43 355.0 20.6 200 1209-1419 1-211 (211)
229 COG1116 TauB ABC-type nitrate/ 100.0 8.9E-39 1.9E-43 346.5 19.6 186 590-795 3-207 (248)
230 PRK10575 iron-hydroxamate tran 100.0 1.9E-38 4.1E-43 364.8 23.5 212 1207-1431 11-237 (265)
231 PRK14254 phosphate ABC transpo 100.0 4.4E-38 9.6E-43 364.5 26.6 220 1206-1434 38-272 (285)
232 PRK14236 phosphate transporter 100.0 3.8E-38 8.1E-43 363.5 25.9 221 1205-1434 23-259 (272)
233 PRK14238 phosphate transporter 100.0 5.1E-38 1.1E-42 362.0 26.9 222 1205-1435 22-259 (271)
234 cd03292 ABC_FtsE_transporter F 100.0 1.4E-38 3E-43 354.7 21.4 201 1208-1420 1-214 (214)
235 PRK11264 putative amino-acid A 100.0 3.5E-38 7.5E-43 360.0 25.2 215 1207-1434 3-236 (250)
236 cd03301 ABC_MalK_N The N-termi 100.0 1.4E-38 3.1E-43 354.3 21.3 202 1208-1424 1-213 (213)
237 PRK11022 dppD dipeptide transp 100.0 3.4E-38 7.5E-43 371.2 25.6 227 1207-1441 3-253 (326)
238 PRK11231 fecE iron-dicitrate t 100.0 2.4E-38 5.2E-43 362.1 23.4 211 1208-1431 3-227 (255)
239 PRK14252 phosphate ABC transpo 100.0 3.7E-38 7.9E-43 362.5 25.0 223 1203-1434 12-252 (265)
240 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.7E-38 3.6E-43 355.4 21.5 203 1208-1426 1-218 (220)
241 TIGR02673 FtsE cell division A 100.0 1.4E-38 3E-43 354.7 20.6 200 1208-1419 2-214 (214)
242 PRK14243 phosphate transporter 100.0 5E-38 1.1E-42 360.9 25.7 220 1207-1435 10-252 (264)
243 PRK14270 phosphate ABC transpo 100.0 4.8E-38 1E-42 358.9 25.5 218 1207-1433 4-237 (251)
244 PRK10070 glycine betaine trans 100.0 3E-38 6.5E-43 377.7 24.5 204 1223-1437 42-260 (400)
245 cd03300 ABC_PotA_N PotA is an 100.0 2.2E-38 4.7E-43 357.3 22.0 211 1208-1433 1-222 (232)
246 PRK11614 livF leucine/isoleuci 100.0 4.2E-38 9.1E-43 356.3 24.4 212 1207-1431 5-226 (237)
247 PRK13645 cbiO cobalt transport 100.0 3.3E-38 7.1E-43 367.2 23.8 217 1205-1432 4-241 (289)
248 PRK11607 potG putrescine trans 100.0 4E-38 8.8E-43 375.8 25.0 218 1206-1438 18-246 (377)
249 cd03246 ABCC_Protease_Secretio 100.0 3.1E-38 6.8E-43 339.6 21.7 172 1208-1420 1-173 (173)
250 TIGR03410 urea_trans_UrtE urea 100.0 4.3E-38 9.4E-43 354.6 23.8 211 1208-1430 1-220 (230)
251 PRK14261 phosphate ABC transpo 100.0 5.5E-38 1.2E-42 358.8 24.9 223 1207-1438 6-244 (253)
252 PRK13649 cbiO cobalt transport 100.0 3E-38 6.5E-43 366.2 23.1 215 1208-1432 3-235 (280)
253 PRK10253 iron-enterobactin tra 100.0 3.9E-38 8.4E-43 362.2 23.8 213 1206-1431 6-233 (265)
254 PRK11247 ssuB aliphatic sulfon 100.0 8.7E-38 1.9E-42 356.2 26.2 204 1206-1427 11-219 (257)
255 cd03299 ABC_ModC_like Archeal 100.0 4.5E-38 9.7E-43 355.3 23.7 210 1208-1433 1-221 (235)
256 PRK09473 oppD oligopeptide tra 100.0 5.6E-38 1.2E-42 369.7 25.1 227 1207-1441 12-261 (330)
257 PRK13641 cbiO cobalt transport 100.0 5.1E-38 1.1E-42 364.9 24.3 215 1207-1432 2-235 (287)
258 PRK13548 hmuV hemin importer A 100.0 8E-38 1.7E-42 358.0 25.5 211 1208-1431 3-230 (258)
259 PRK10895 lipopolysaccharide AB 100.0 6.8E-38 1.5E-42 355.5 24.7 212 1207-1431 3-226 (241)
260 PRK14258 phosphate ABC transpo 100.0 6.7E-38 1.5E-42 359.4 24.9 222 1206-1436 6-250 (261)
261 cd03298 ABC_ThiQ_thiamine_tran 100.0 5.4E-38 1.2E-42 349.1 23.3 200 1208-1424 1-211 (211)
262 PRK10584 putative ABC transpor 100.0 6.1E-38 1.3E-42 353.0 24.0 206 1207-1423 6-227 (228)
263 TIGR00968 3a0106s01 sulfate AB 100.0 7.7E-38 1.7E-42 353.9 24.8 210 1208-1432 1-221 (237)
264 TIGR01288 nodI ATP-binding ABC 100.0 5.7E-38 1.2E-42 367.3 24.1 212 1207-1432 4-225 (303)
265 PRK14271 phosphate ABC transpo 100.0 1.1E-37 2.5E-42 359.7 26.1 219 1207-1434 21-254 (276)
266 PRK14241 phosphate transporter 100.0 7.3E-38 1.6E-42 358.8 24.3 219 1207-1434 4-245 (258)
267 PRK13638 cbiO cobalt transport 100.0 5.1E-38 1.1E-42 362.4 23.1 212 1208-1432 2-226 (271)
268 PRK14253 phosphate ABC transpo 100.0 9.7E-38 2.1E-42 356.0 25.1 219 1207-1434 3-236 (249)
269 PRK14272 phosphate ABC transpo 100.0 7.9E-38 1.7E-42 357.5 24.4 223 1207-1438 4-243 (252)
270 PRK14265 phosphate ABC transpo 100.0 1.3E-37 2.7E-42 359.2 26.2 221 1205-1434 18-261 (274)
271 cd03235 ABC_Metallic_Cations A 100.0 3.2E-38 6.9E-43 351.5 20.5 197 1209-1424 1-213 (213)
272 PRK14263 phosphate ABC transpo 100.0 1.1E-37 2.4E-42 357.0 25.5 222 1207-1437 8-251 (261)
273 PRK13639 cbiO cobalt transport 100.0 7.5E-38 1.6E-42 361.4 23.9 213 1208-1432 2-227 (275)
274 PRK11300 livG leucine/isoleuci 100.0 8.9E-38 1.9E-42 357.7 24.3 212 1207-1431 5-243 (255)
275 PRK10771 thiQ thiamine transpo 100.0 1.6E-37 3.5E-42 350.4 25.9 208 1208-1432 2-220 (232)
276 PRK15112 antimicrobial peptide 100.0 7.9E-38 1.7E-42 359.9 23.8 226 1207-1443 4-252 (267)
277 PRK14255 phosphate ABC transpo 100.0 1E-37 2.2E-42 356.5 24.2 222 1207-1437 5-242 (252)
278 PRK14264 phosphate ABC transpo 100.0 1.1E-37 2.4E-42 364.6 25.1 220 1205-1433 43-291 (305)
279 PRK13536 nodulation factor exp 100.0 5.6E-38 1.2E-42 370.4 22.7 212 1207-1432 41-262 (340)
280 TIGR03522 GldA_ABC_ATP gliding 100.0 7.6E-38 1.6E-42 365.7 23.6 211 1208-1432 3-222 (301)
281 COG1125 OpuBA ABC-type proline 100.0 2.7E-38 5.9E-43 337.1 17.9 209 591-817 2-234 (309)
282 PRK14275 phosphate ABC transpo 100.0 1.1E-37 2.3E-42 361.8 24.4 224 1205-1437 37-276 (286)
283 cd03269 ABC_putative_ATPase Th 100.0 5.1E-38 1.1E-42 349.1 20.7 200 1208-1424 1-210 (210)
284 cd03257 ABC_NikE_OppD_transpor 100.0 1.3E-37 2.9E-42 350.3 24.3 207 1208-1424 2-228 (228)
285 PRK10908 cell division protein 100.0 1.7E-37 3.6E-42 347.9 24.8 203 1208-1422 2-217 (222)
286 PRK15093 antimicrobial peptide 100.0 1.5E-37 3.3E-42 366.9 25.6 226 1207-1440 3-257 (330)
287 COG1120 FepC ABC-type cobalami 100.0 6.3E-38 1.4E-42 347.2 20.8 199 590-808 2-228 (258)
288 TIGR03873 F420-0_ABC_ATP propo 100.0 1.1E-37 2.4E-42 356.8 23.6 211 1208-1431 2-226 (256)
289 TIGR01277 thiQ thiamine ABC tr 100.0 1.6E-37 3.5E-42 345.7 23.0 201 1208-1425 1-212 (213)
290 cd03262 ABC_HisP_GlnQ_permease 100.0 8.7E-38 1.9E-42 348.0 20.7 200 1208-1420 1-213 (213)
291 COG1131 CcmA ABC-type multidru 100.0 9.3E-38 2E-42 361.5 21.6 213 1207-1432 4-227 (293)
292 COG1135 AbcC ABC-type metal io 100.0 8.1E-38 1.8E-42 344.0 19.8 211 591-814 2-237 (339)
293 TIGR03415 ABC_choXWV_ATP choli 100.0 1.7E-37 3.6E-42 368.7 23.7 205 1222-1437 37-260 (382)
294 PRK11701 phnK phosphonate C-P 100.0 3.8E-37 8.3E-42 352.8 25.8 222 1207-1440 6-250 (258)
295 PRK14246 phosphate ABC transpo 100.0 3E-37 6.5E-42 352.7 24.6 223 1207-1438 10-248 (257)
296 PRK10418 nikD nickel transport 100.0 3.5E-37 7.6E-42 352.2 24.9 223 1207-1442 4-242 (254)
297 PRK10247 putative ABC transpor 100.0 1.6E-37 3.5E-42 348.5 21.6 209 1207-1427 7-223 (225)
298 TIGR01188 drrA daunorubicin re 100.0 1.5E-37 3.2E-42 363.6 22.1 203 1216-1432 2-214 (302)
299 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.6E-37 5.5E-42 340.4 22.5 198 589-808 3-227 (254)
300 TIGR01978 sufC FeS assembly AT 100.0 2.1E-37 4.5E-42 352.1 22.1 212 1208-1430 1-233 (243)
301 PRK11144 modC molybdate transp 100.0 3.1E-37 6.8E-42 367.2 24.5 214 1208-1437 2-224 (352)
302 COG1127 Ttg2A ABC-type transpo 100.0 3.8E-37 8.1E-42 328.0 22.2 203 588-811 6-238 (263)
303 PRK00349 uvrA excinuclease ABC 100.0 1.7E-36 3.7E-41 391.7 33.0 111 1333-1443 818-939 (943)
304 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.4E-36 3.1E-41 349.7 28.8 231 565-808 16-247 (282)
305 PRK13547 hmuV hemin importer A 100.0 5E-37 1.1E-41 352.9 24.5 211 1208-1431 2-244 (272)
306 KOG0066 eIF2-interacting prote 100.0 1.4E-37 3.1E-42 347.9 18.8 193 1207-1423 586-782 (807)
307 PRK09984 phosphonate/organopho 100.0 7.7E-37 1.7E-41 351.1 24.8 221 1207-1443 4-251 (262)
308 PRK11248 tauB taurine transpor 100.0 5.4E-37 1.2E-41 350.2 22.6 201 1208-1426 2-215 (255)
309 COG3839 MalK ABC-type sugar tr 100.0 3.4E-37 7.4E-42 353.9 20.8 204 590-813 3-228 (338)
310 PRK10419 nikE nickel transport 100.0 9.9E-37 2.1E-41 350.8 24.7 224 1207-1441 3-250 (268)
311 cd03228 ABCC_MRP_Like The MRP 100.0 6.2E-37 1.4E-41 328.9 21.2 171 1208-1419 1-171 (171)
312 TIGR03740 galliderm_ABC gallid 100.0 1.4E-36 3.1E-41 340.6 24.8 204 1208-1428 1-210 (223)
313 TIGR02982 heterocyst_DevA ABC 100.0 4.9E-37 1.1E-41 343.6 20.8 202 1208-1420 2-219 (220)
314 COG0410 LivF ABC-type branched 100.0 7.5E-37 1.6E-41 325.9 20.8 215 1207-1433 3-228 (237)
315 COG1245 Predicted ATPase, RNas 100.0 3.2E-36 6.9E-41 342.1 27.2 176 1231-1431 363-547 (591)
316 cd03250 ABCC_MRP_domain1 Domai 100.0 1.1E-36 2.4E-41 336.8 23.0 200 591-796 1-204 (204)
317 COG1118 CysA ABC-type sulfate/ 100.0 3.6E-37 7.8E-42 337.8 18.6 216 1207-1437 2-233 (345)
318 TIGR02142 modC_ABC molybdenum 100.0 9.8E-37 2.1E-41 363.5 23.5 212 1212-1438 4-228 (354)
319 COG1118 CysA ABC-type sulfate/ 100.0 3.5E-37 7.5E-42 337.9 17.6 203 591-814 3-233 (345)
320 cd03252 ABCC_Hemolysin The ABC 100.0 2.9E-36 6.3E-41 341.4 25.1 210 591-808 1-225 (237)
321 TIGR02323 CP_lyasePhnK phospho 100.0 3.4E-36 7.5E-41 344.1 25.7 222 1207-1440 3-247 (253)
322 cd03230 ABC_DR_subfamily_A Thi 100.0 1.3E-36 2.9E-41 326.9 20.7 170 1208-1420 1-173 (173)
323 cd03229 ABC_Class3 This class 100.0 2E-36 4.3E-41 327.1 21.4 172 1208-1419 1-178 (178)
324 PRK09544 znuC high-affinity zi 100.0 3.9E-36 8.5E-41 341.9 24.8 208 1207-1441 4-217 (251)
325 cd03217 ABC_FeS_Assembly ABC-t 100.0 2.5E-36 5.4E-41 332.5 22.4 185 1208-1430 1-192 (200)
326 COG1117 PstB ABC-type phosphat 100.0 7.5E-37 1.6E-41 318.8 16.6 204 589-809 6-238 (253)
327 COG3842 PotA ABC-type spermidi 100.0 1.2E-36 2.6E-41 351.2 19.7 207 589-815 4-233 (352)
328 COG4555 NatA ABC-type Na+ tran 100.0 1.1E-36 2.5E-41 314.3 17.3 214 1208-1434 2-225 (245)
329 PRK15056 manganese/iron transp 100.0 3.4E-36 7.4E-41 347.3 23.3 208 1207-1431 6-230 (272)
330 COG1137 YhbG ABC-type (unclass 100.0 1.9E-37 4.2E-42 319.7 11.2 215 1206-1433 3-230 (243)
331 COG0444 DppD ABC-type dipeptid 100.0 2.8E-36 6.1E-41 337.9 21.5 228 1208-1443 2-255 (316)
332 cd03234 ABCG_White The White s 100.0 1.5E-36 3.3E-41 341.0 19.4 203 1208-1424 4-226 (226)
333 cd03297 ABC_ModC_molybdenum_tr 100.0 3.3E-36 7.1E-41 335.5 21.4 200 1208-1424 2-214 (214)
334 COG3840 ThiQ ABC-type thiamine 100.0 1.9E-36 4.1E-41 307.5 17.5 197 591-809 2-220 (231)
335 cd03233 ABC_PDR_domain1 The pl 100.0 4E-36 8.6E-41 331.3 21.5 190 1207-1424 3-202 (202)
336 cd03254 ABCC_Glucan_exporter_l 100.0 8.6E-36 1.9E-40 335.8 24.1 210 590-808 2-226 (229)
337 cd03215 ABC_Carb_Monos_II This 100.0 3.1E-36 6.8E-41 326.8 19.6 172 1207-1420 4-182 (182)
338 cd03288 ABCC_SUR2 The SUR doma 100.0 1.2E-35 2.6E-40 340.1 25.4 219 589-815 18-250 (257)
339 cd03213 ABCG_EPDR ABCG transpo 100.0 4.4E-36 9.5E-41 328.9 20.2 182 1207-1424 3-194 (194)
340 COG1136 SalX ABC-type antimicr 100.0 8.3E-36 1.8E-40 324.2 22.0 193 591-798 2-221 (226)
341 TIGR03608 L_ocin_972_ABC putat 100.0 3.1E-36 6.7E-41 333.8 19.1 193 1210-1415 1-206 (206)
342 CHL00131 ycf16 sulfate ABC tra 100.0 1.1E-35 2.3E-40 339.9 23.6 212 1207-1429 7-239 (252)
343 cd03214 ABC_Iron-Siderophores_ 100.0 5.4E-36 1.2E-40 324.4 20.0 177 1209-1424 1-180 (180)
344 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.4E-35 3.1E-40 335.9 24.4 211 591-808 1-226 (238)
345 cd03223 ABCD_peroxisomal_ALDP 100.0 7.3E-36 1.6E-40 318.7 20.7 164 1208-1419 1-164 (166)
346 cd03251 ABCC_MsbA MsbA is an e 100.0 1.6E-35 3.4E-40 334.8 24.5 210 591-808 1-225 (234)
347 cd03232 ABC_PDR_domain2 The pl 100.0 4.4E-36 9.6E-41 328.4 19.4 181 1207-1424 3-192 (192)
348 TIGR02770 nickel_nikD nickel i 100.0 8.3E-36 1.8E-40 335.9 21.5 206 1224-1439 1-223 (230)
349 cd03244 ABCC_MRP_domain2 Domai 100.0 2.3E-35 5.1E-40 330.4 24.4 205 590-802 2-220 (221)
350 PRK03695 vitamin B12-transport 100.0 1.5E-35 3.2E-40 337.3 23.0 205 1209-1431 2-222 (248)
351 cd03253 ABCC_ATM1_transporter 100.0 2.7E-35 5.8E-40 333.3 24.8 209 591-808 1-224 (236)
352 COG1122 CbiO ABC-type cobalt t 100.0 9.4E-36 2E-40 330.6 20.0 199 590-808 3-228 (235)
353 PRK11650 ugpC glycerol-3-phosp 100.0 1.9E-35 4.1E-40 351.1 23.7 201 590-810 3-226 (356)
354 TIGR00630 uvra excinuclease AB 100.0 1.4E-34 3E-39 373.3 33.1 216 1207-1429 612-923 (924)
355 cd03245 ABCC_bacteriocin_expor 100.0 4.8E-35 1E-39 327.6 24.3 204 590-801 2-220 (220)
356 COG4619 ABC-type uncharacteriz 100.0 6.6E-36 1.4E-40 299.2 15.1 198 1216-1423 10-215 (223)
357 TIGR01184 ntrCD nitrate transp 100.0 2E-35 4.3E-40 332.6 20.5 190 1225-1430 1-203 (230)
358 cd03231 ABC_CcmA_heme_exporter 100.0 3.5E-35 7.6E-40 323.8 22.1 194 1208-1415 1-198 (201)
359 TIGR01186 proV glycine betaine 100.0 1.6E-35 3.4E-40 350.5 20.4 195 611-814 6-225 (363)
360 PRK09580 sufC cysteine desulfu 100.0 3.2E-35 7E-40 335.2 22.2 210 1208-1429 2-233 (248)
361 COG1123 ATPase components of v 100.0 2.9E-35 6.4E-40 352.3 22.6 228 1207-1443 5-256 (539)
362 cd03267 ABC_NatA_like Similar 100.0 2.6E-35 5.6E-40 332.9 20.8 191 1222-1424 34-236 (236)
363 PRK00635 excinuclease ABC subu 100.0 3.2E-34 7E-39 382.9 34.5 207 1207-1431 600-906 (1809)
364 PRK15439 autoinducer 2 ABC tra 100.0 5.9E-35 1.3E-39 365.8 25.6 212 1207-1431 11-229 (510)
365 TIGR02314 ABC_MetN D-methionin 100.0 3.7E-35 8.1E-40 345.6 22.3 203 591-810 2-232 (343)
366 cd03216 ABC_Carb_Monos_I This 100.0 7.8E-35 1.7E-39 309.8 22.2 159 1208-1422 1-162 (163)
367 COG0411 LivG ABC-type branched 100.0 9E-36 2E-40 320.0 15.0 213 1208-1433 5-241 (250)
368 COG3638 ABC-type phosphate/pho 100.0 1.8E-35 4E-40 314.4 17.1 204 589-808 2-237 (258)
369 PRK13549 xylose transporter AT 100.0 4.4E-35 9.5E-40 367.1 23.2 211 1207-1430 5-231 (506)
370 PRK13538 cytochrome c biogenes 100.0 6.1E-35 1.3E-39 322.7 21.2 194 1208-1415 2-202 (204)
371 PRK10762 D-ribose transporter 100.0 5.3E-35 1.2E-39 365.9 23.3 212 1207-1431 4-230 (501)
372 PRK09700 D-allose transporter 100.0 4.4E-35 9.6E-40 367.7 22.4 212 1207-1431 5-234 (510)
373 PRK13631 cbiO cobalt transport 100.0 8.8E-35 1.9E-39 341.2 23.4 206 588-808 19-265 (320)
374 cd03290 ABCC_SUR1_N The SUR do 100.0 1.3E-34 2.8E-39 323.7 22.7 197 592-796 2-218 (218)
375 PRK11432 fbpC ferric transport 100.0 9.2E-35 2E-39 344.2 22.5 201 590-811 6-229 (351)
376 cd03261 ABC_Org_Solvent_Resist 100.0 8.7E-35 1.9E-39 328.8 21.3 197 591-808 1-226 (235)
377 PRK10261 glutathione transport 100.0 6.5E-35 1.4E-39 372.5 22.8 223 1207-1437 12-264 (623)
378 COG1124 DppF ABC-type dipeptid 100.0 1.3E-34 2.8E-39 310.7 21.2 204 590-809 3-232 (252)
379 PRK10938 putative molybdenum t 100.0 1.2E-34 2.6E-39 362.3 23.4 212 1207-1432 3-225 (490)
380 TIGR03265 PhnT2 putative 2-ami 100.0 1.4E-34 2.9E-39 343.4 22.5 201 590-811 4-227 (353)
381 PRK13643 cbiO cobalt transport 100.0 1.5E-34 3.2E-39 335.9 22.3 203 591-808 2-233 (288)
382 PRK09452 potA putrescine/sperm 100.0 2E-34 4.3E-39 343.4 23.6 201 589-810 13-236 (375)
383 PRK15134 microcin C ABC transp 100.0 2.4E-34 5.3E-39 362.3 25.5 220 1207-1434 5-249 (529)
384 PRK13637 cbiO cobalt transport 100.0 1.6E-34 3.4E-39 335.5 21.8 205 590-808 2-234 (287)
385 PRK13634 cbiO cobalt transport 100.0 1.7E-34 3.7E-39 335.7 22.1 203 591-808 3-235 (290)
386 cd03296 ABC_CysA_sulfate_impor 100.0 2.7E-34 6E-39 325.5 23.0 197 591-808 3-226 (239)
387 PRK13540 cytochrome c biogenes 100.0 1.7E-34 3.8E-39 318.1 20.7 192 1208-1413 2-197 (200)
388 PRK13543 cytochrome c biogenes 100.0 2.7E-34 5.9E-39 319.9 22.4 195 1207-1417 11-212 (214)
389 TIGR02324 CP_lyasePhnL phospho 100.0 2.2E-34 4.8E-39 323.2 21.0 198 1208-1415 2-222 (224)
390 COG4608 AppF ABC-type oligopep 100.0 1.7E-34 3.7E-39 317.3 19.4 197 1207-1443 4-211 (268)
391 cd03260 ABC_PstB_phosphate_tra 100.0 2.1E-34 4.6E-39 324.0 20.8 194 591-805 1-226 (227)
392 PRK11000 maltose/maltodextrin 100.0 2.5E-34 5.4E-39 343.8 22.6 199 590-809 3-224 (369)
393 PRK11288 araG L-arabinose tran 100.0 2.3E-34 5E-39 360.2 23.2 207 1207-1426 4-224 (501)
394 TIGR00972 3a0107s01c2 phosphat 100.0 3.7E-34 8.1E-39 326.1 22.8 202 590-808 1-232 (247)
395 TIGR03258 PhnT 2-aminoethylpho 100.0 2.9E-34 6.3E-39 340.9 22.6 202 589-810 4-230 (362)
396 cd03219 ABC_Mj1267_LivG_branch 100.0 2.7E-34 5.8E-39 325.2 21.3 201 591-808 1-232 (236)
397 PRK14242 phosphate transporter 100.0 3.7E-34 8.1E-39 327.3 22.5 203 589-808 5-237 (253)
398 PRK13539 cytochrome c biogenes 100.0 3.8E-34 8.2E-39 317.0 21.8 193 1208-1417 3-200 (207)
399 PRK13651 cobalt transporter AT 100.0 3.9E-34 8.5E-39 333.8 22.8 204 590-808 2-254 (305)
400 TIGR01189 ccmA heme ABC export 100.0 3.7E-34 8E-39 315.0 21.3 192 1208-1414 1-197 (198)
401 PRK10851 sulfate/thiosulfate t 100.0 4.2E-34 9.2E-39 339.1 23.3 199 590-809 2-227 (353)
402 cd03259 ABC_Carb_Solutes_like 100.0 3E-34 6.5E-39 319.5 20.6 190 591-801 1-213 (213)
403 PRK14250 phosphate ABC transpo 100.0 7.6E-34 1.7E-38 322.1 24.2 199 590-808 3-221 (241)
404 cd03369 ABCC_NFT1 Domain 2 of 100.0 8.1E-34 1.7E-38 314.6 23.9 188 589-802 5-206 (207)
405 TIGR01257 rim_protein retinal- 100.0 2.9E-34 6.2E-39 389.3 24.5 215 1207-1433 928-1151(2272)
406 PRK13650 cbiO cobalt transport 100.0 3.9E-34 8.5E-39 331.0 22.2 201 590-808 4-229 (279)
407 COG4559 ABC-type hemin transpo 100.0 3.2E-34 6.9E-39 298.4 19.1 213 1208-1433 2-232 (259)
408 COG4175 ProV ABC-type proline/ 100.0 2.9E-34 6.4E-39 314.4 19.7 203 1224-1437 43-260 (386)
409 PRK13647 cbiO cobalt transport 100.0 3E-34 6.5E-39 331.1 21.0 197 590-806 4-225 (274)
410 PLN03211 ABC transporter G-25; 100.0 6E-34 1.3E-38 362.7 25.7 199 1222-1431 81-296 (659)
411 PRK14269 phosphate ABC transpo 100.0 5.7E-34 1.2E-38 324.2 22.8 202 590-808 2-230 (246)
412 PRK10982 galactose/methyl gala 100.0 3.2E-34 6.8E-39 358.3 22.6 208 1210-1430 1-222 (491)
413 PRK14273 phosphate ABC transpo 100.0 7.6E-34 1.7E-38 324.9 23.8 203 589-808 6-238 (254)
414 TIGR00960 3a0501s02 Type II (G 100.0 2.6E-34 5.6E-39 320.8 19.3 188 591-797 2-216 (216)
415 PRK13646 cbiO cobalt transport 100.0 4.6E-34 9.9E-39 331.6 21.6 204 590-808 2-235 (286)
416 cd03248 ABCC_TAP TAP, the Tran 100.0 7.4E-34 1.6E-38 319.4 22.5 203 588-797 9-226 (226)
417 cd03265 ABC_DrrA DrrA is the A 100.0 4E-34 8.6E-39 320.2 20.1 195 591-806 1-219 (220)
418 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.4E-34 9.5E-39 319.8 20.5 196 591-803 1-218 (220)
419 TIGR02633 xylG D-xylose ABC tr 100.0 6.2E-34 1.3E-38 356.7 24.0 211 1208-1430 2-229 (500)
420 cd03226 ABC_cobalt_CbiO_domain 100.0 4.1E-34 8.8E-39 316.5 19.7 186 593-798 2-205 (205)
421 COG4615 PvdE ABC-type sideroph 100.0 4.9E-31 1.1E-35 294.9 44.1 502 266-800 4-529 (546)
422 TIGR02315 ABC_phnC phosphonate 100.0 7.4E-34 1.6E-38 323.0 22.1 197 591-807 2-234 (243)
423 cd03263 ABC_subfamily_A The AB 100.0 7.2E-34 1.6E-38 318.1 21.2 197 591-806 1-219 (220)
424 cd03256 ABC_PhnC_transporter A 100.0 7.5E-34 1.6E-38 322.6 21.5 197 591-807 1-233 (241)
425 PRK11607 potG putrescine trans 100.0 8.4E-34 1.8E-38 338.7 22.9 204 588-811 17-242 (377)
426 cd03268 ABC_BcrA_bacitracin_re 100.0 9.2E-34 2E-38 314.4 21.6 190 591-801 1-208 (208)
427 PRK10535 macrolide transporter 100.0 9E-34 1.9E-38 363.2 24.3 213 1207-1430 4-231 (648)
428 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 5.7E-34 1.2E-38 318.5 19.7 190 591-797 1-218 (218)
429 COG4178 ABC-type uncharacteriz 100.0 2.7E-30 5.9E-35 313.3 52.7 434 339-793 107-587 (604)
430 PRK11153 metN DL-methionine tr 100.0 1E-33 2.2E-38 335.9 22.6 202 591-809 2-231 (343)
431 cd03235 ABC_Metallic_Cations A 100.0 8.6E-34 1.9E-38 315.9 20.6 187 593-801 2-213 (213)
432 PRK13537 nodulation ABC transp 100.0 1E-33 2.2E-38 331.0 22.1 199 589-808 6-227 (306)
433 TIGR03771 anch_rpt_ABC anchore 100.0 4.9E-34 1.1E-38 319.7 18.6 186 1230-1432 1-202 (223)
434 PRK13635 cbiO cobalt transport 100.0 1.3E-33 2.9E-38 326.4 22.7 201 589-808 4-229 (279)
435 TIGR01166 cbiO cobalt transpor 100.0 4.5E-34 9.8E-39 312.3 17.7 173 1222-1405 5-189 (190)
436 COG4598 HisP ABC-type histidin 100.0 3.5E-34 7.6E-39 289.3 15.4 217 1207-1436 6-246 (256)
437 PRK13546 teichoic acids export 100.0 1.5E-33 3.3E-38 322.4 22.8 208 1207-1438 4-239 (264)
438 PRK10744 pstB phosphate transp 100.0 2.2E-33 4.8E-38 322.0 24.1 203 589-808 12-244 (260)
439 cd03224 ABC_TM1139_LivF_branch 100.0 1.3E-33 2.9E-38 316.5 21.6 197 591-807 1-220 (222)
440 PRK13644 cbiO cobalt transport 100.0 1.5E-33 3.3E-38 325.2 22.7 198 591-808 2-224 (274)
441 cd03218 ABC_YhbG The ABC trans 100.0 1.3E-33 2.9E-38 318.6 21.7 197 591-808 1-222 (232)
442 PRK11247 ssuB aliphatic sulfon 100.0 1.9E-33 4E-38 320.7 22.9 195 589-804 11-219 (257)
443 TIGR01288 nodI ATP-binding ABC 100.0 1.4E-33 3.1E-38 330.2 22.4 200 588-808 2-224 (303)
444 cd03294 ABC_Pro_Gly_Bertaine T 100.0 8.8E-34 1.9E-38 326.5 20.3 185 611-808 37-250 (269)
445 cd03301 ABC_MalK_N The N-termi 100.0 1E-33 2.2E-38 315.2 20.1 190 591-801 1-213 (213)
446 PRK13641 cbiO cobalt transport 100.0 1.7E-33 3.7E-38 327.0 22.5 204 590-808 2-234 (287)
447 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.8E-33 3.8E-38 318.3 22.0 197 591-808 2-221 (236)
448 PRK14235 phosphate transporter 100.0 1.9E-33 4.1E-38 323.6 22.6 204 588-808 17-251 (267)
449 PRK13636 cbiO cobalt transport 100.0 1.9E-33 4.1E-38 326.0 22.6 199 590-808 5-231 (283)
450 cd03258 ABC_MetN_methionine_tr 100.0 1.7E-33 3.7E-38 318.0 21.5 201 591-808 2-230 (233)
451 PRK14274 phosphate ABC transpo 100.0 2.4E-33 5.2E-38 321.6 23.0 202 590-808 12-243 (259)
452 PRK11629 lolD lipoprotein tran 100.0 1.9E-33 4E-38 317.5 21.7 196 590-802 5-228 (233)
453 TIGR03269 met_CoM_red_A2 methy 100.0 9.2E-34 2E-38 356.6 21.4 211 1208-1431 1-258 (520)
454 PRK13541 cytochrome c biogenes 100.0 1.1E-33 2.5E-38 310.3 19.4 188 1208-1413 2-193 (195)
455 KOG0060 Long-chain acyl-CoA tr 100.0 1.1E-30 2.3E-35 306.1 45.2 337 1070-1418 269-642 (659)
456 cd03247 ABCC_cytochrome_bd The 100.0 1.7E-33 3.6E-38 304.4 20.4 165 591-801 1-178 (178)
457 PRK13545 tagH teichoic acids e 100.0 4.7E-33 1E-37 334.8 26.3 202 1207-1432 21-233 (549)
458 cd03266 ABC_NatA_sodium_export 100.0 1.8E-33 3.8E-38 314.6 21.1 194 591-801 2-218 (218)
459 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.2E-33 4.7E-38 318.8 22.1 200 591-808 1-225 (242)
460 COG2884 FtsE Predicted ATPase 100.0 1.3E-33 2.8E-38 289.6 18.1 192 591-801 2-219 (223)
461 PRK14251 phosphate ABC transpo 100.0 2.2E-33 4.7E-38 320.6 22.2 202 590-808 4-235 (251)
462 cd03264 ABC_drug_resistance_li 100.0 1.3E-33 2.9E-38 313.9 19.8 189 591-801 1-211 (211)
463 PRK14245 phosphate ABC transpo 100.0 2E-33 4.4E-38 320.6 21.5 202 590-808 3-234 (250)
464 PRK14239 phosphate transporter 100.0 2.5E-33 5.5E-38 320.4 22.3 202 590-808 5-236 (252)
465 PRK09536 btuD corrinoid ABC tr 100.0 1.9E-33 4E-38 336.7 21.9 198 590-808 3-228 (402)
466 PRK14248 phosphate ABC transpo 100.0 3.8E-33 8.3E-38 321.5 23.6 203 589-808 20-252 (268)
467 PRK14270 phosphate ABC transpo 100.0 3.6E-33 7.8E-38 318.8 23.0 202 590-808 4-235 (251)
468 PRK14259 phosphate ABC transpo 100.0 4.3E-33 9.4E-38 320.8 23.8 204 588-808 11-253 (269)
469 PRK14268 phosphate ABC transpo 100.0 3.3E-33 7.1E-38 320.2 22.7 203 589-808 11-242 (258)
470 PRK11831 putative ABC transpor 100.0 3.5E-33 7.5E-38 321.7 22.7 199 589-808 6-233 (269)
471 PRK09493 glnQ glutamine ABC tr 100.0 4.2E-33 9.1E-38 316.1 23.0 197 591-808 2-225 (240)
472 cd03269 ABC_putative_ATPase Th 100.0 2.3E-33 5E-38 311.8 20.3 190 591-801 1-210 (210)
473 PRK13640 cbiO cobalt transport 100.0 2.8E-33 6.1E-38 324.4 21.8 201 589-808 4-232 (282)
474 COG4175 ProV ABC-type proline/ 100.0 1.4E-33 3.1E-38 309.1 18.1 192 613-816 43-262 (386)
475 PRK13649 cbiO cobalt transport 100.0 2.8E-33 6E-38 324.7 21.7 204 590-808 2-234 (280)
476 PRK14249 phosphate ABC transpo 100.0 5E-33 1.1E-37 317.6 23.4 202 590-808 4-235 (251)
477 PRK14237 phosphate transporter 100.0 4.6E-33 9.9E-38 320.4 23.2 204 588-808 18-251 (267)
478 PRK14247 phosphate ABC transpo 100.0 5.3E-33 1.2E-37 317.2 23.4 202 590-808 3-234 (250)
479 PRK13536 nodulation factor exp 100.0 3.2E-33 6.9E-38 330.0 22.0 200 588-808 39-261 (340)
480 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.5E-33 5.5E-38 314.1 20.2 193 1208-1424 23-224 (224)
481 PRK10619 histidine/lysine/argi 100.0 4.5E-33 9.8E-38 319.0 22.7 200 589-808 4-241 (257)
482 cd03298 ABC_ThiQ_thiamine_tran 100.0 4E-33 8.6E-38 310.1 21.5 188 591-801 1-211 (211)
483 TIGR03411 urea_trans_UrtD urea 100.0 3.8E-33 8.3E-38 316.9 21.7 198 590-808 2-231 (242)
484 TIGR02211 LolD_lipo_ex lipopro 100.0 3.6E-33 7.8E-38 312.7 21.1 191 591-798 2-220 (221)
485 PRK11264 putative amino-acid A 100.0 4.4E-33 9.6E-38 317.9 22.0 198 590-808 3-233 (250)
486 PRK13645 cbiO cobalt transport 100.0 3.7E-33 8E-38 324.9 21.7 205 589-808 5-240 (289)
487 PRK14240 phosphate transporter 100.0 6.2E-33 1.4E-37 316.7 23.1 202 590-808 3-234 (250)
488 PRK14243 phosphate transporter 100.0 6.8E-33 1.5E-37 318.4 23.6 203 589-808 9-248 (264)
489 TIGR03410 urea_trans_UrtE urea 100.0 4.2E-33 9.2E-38 314.1 21.4 197 591-807 1-220 (230)
490 PRK11231 fecE iron-dicitrate t 100.0 5.2E-33 1.1E-37 318.1 22.4 197 591-808 3-227 (255)
491 PRK13632 cbiO cobalt transport 100.0 5.1E-33 1.1E-37 320.7 22.3 201 589-808 6-231 (271)
492 PRK11300 livG leucine/isoleuci 100.0 5.8E-33 1.3E-37 318.0 22.5 198 590-808 5-243 (255)
493 PRK14267 phosphate ABC transpo 100.0 5.8E-33 1.3E-37 317.5 22.5 202 590-808 4-237 (253)
494 TIGR02673 FtsE cell division A 100.0 2.9E-33 6.2E-38 311.9 19.2 186 591-796 2-214 (214)
495 cd03257 ABC_NikE_OppD_transpor 100.0 4.3E-33 9.3E-38 313.7 20.7 195 591-801 2-228 (228)
496 cd03292 ABC_FtsE_transporter F 100.0 3.3E-33 7.2E-38 311.5 19.6 187 591-797 1-214 (214)
497 PRK10247 putative ABC transpor 100.0 5.1E-33 1.1E-37 312.1 21.2 197 588-804 5-223 (225)
498 cd03223 ABCD_peroxisomal_ALDP 100.0 5E-33 1.1E-37 296.9 20.1 160 591-795 1-163 (166)
499 PRK13548 hmuV hemin importer A 100.0 9.3E-33 2E-37 316.2 23.6 197 591-808 3-230 (258)
500 PRK14236 phosphate transporter 100.0 6.7E-33 1.4E-37 319.9 22.5 204 588-808 23-256 (272)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-276 Score=2627.13 Aligned_cols=1235 Identities=43% Similarity=0.739 Sum_probs=1154.8
Q ss_pred CCCcccCCh--hHHHHHHhHHHHHHhhccCCCCCCCCCCCCcCCcHHHHHHHHHHHHHhhcc---CCCChHHHHHHHHHH
Q 000504 201 ISTFASAGV--LSKITFHWLNQLFQRGRIQKLELLHIPPIPQSETANDASSLLEESLRKQKT---DATSLPQVIIHAVWK 275 (1458)
Q Consensus 201 ~~p~~~a~~--~s~~~f~Wl~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~---~~~~l~~~l~~~~~~ 275 (1458)
++|.+.++. +|+++|||++|++++|||++|+.+|+|+++++|+++.+.++|+++|+++.+ ++|+++++++++||+
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~~~psl~~al~~~f~~ 201 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSGKKPSLLRALLRTFGR 201 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhccccCCcHHHHHHHHHHHH
Confidence 445555555 999999999999999999999999999999999999999999999999854 358999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 276 SLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTV 355 (1458)
Q Consensus 276 ~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~iR~~L~~ 355 (1458)
++++.++++++.+.+.|++|.+|+.+++|+++++. ..+. ||++|++++++.++++++.|||+|..+++|+|+|+++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~-~~~~-g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~ 279 (1381)
T KOG0054|consen 202 TFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRL-PLNN-GYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALIS 279 (1381)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCc-ccch-hHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHH
Confidence 99999999999999999999999999999998743 3444 999999999999999999999999999999999999999
Q ss_pred HHHHHhcccccCCC---CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000504 356 LIYKRSMAIKFAGP---SSGIIINMINVDVERIGDFFLYIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSN 432 (1458)
Q Consensus 356 ~Iy~K~L~ls~~~~---~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~~~~~ 432 (1458)
+||||+|++++.++ +.|+|+|+|++|++|+.++++++|.+|.+|+|+++++++||+++| +++++|++++++++|+|
T Consensus 280 ~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG-~sa~~G~~~~il~~p~n 358 (1381)
T KOG0054|consen 280 AIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLG-PSALAGVAVMVLLIPLN 358 (1381)
T ss_pred HHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHH
Confidence 99999999999986 899999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 433 TPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWASPTLV 512 (1458)
Q Consensus 433 ~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p~~v 512 (1458)
.+++++++++|++.|+.+|+|++.|||+|+|||+|||||||++|.++|+++|++|++++||..+..+++.++++++|+++
T Consensus 359 ~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv 438 (1381)
T KOG0054|consen 359 SFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLV 438 (1381)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCCCCCCCCCCCCcc
Q 000504 513 SVITFGVCI-LLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDN-QKKPITEPTSKASDVA 590 (1458)
Q Consensus 513 ~~~tF~~~~-~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e-~~~~~~~~~~~~~~~~ 590 (1458)
+++||++|+ ..|+.++++++|+++++||+|+.|+.++|..++.++|++||++|+++||..+| +++..++.+.++.+.+
T Consensus 439 ~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~ 518 (1381)
T KOG0054|consen 439 SVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENA 518 (1381)
T ss_pred HHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCce
Confidence 999999999 77889999999999999999999999999999999999999999999999999 5554444455556778
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCEEEEEcCCCC
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGKKAYVPQSSW 669 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~~ayv~Q~~~ 669 (1458)
|+++|++|+|+++ ++.++|+| |++|++|+++||||++||||||||++|+|||++.+|++ .++|++|||||+||
T Consensus 519 i~i~~~sfsW~~~-----~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v-~v~gsiaYv~Q~pW 592 (1381)
T KOG0054|consen 519 IEIKNGSFSWDSE-----SPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSV-AVNGSVAYVPQQPW 592 (1381)
T ss_pred EEEeeeeEecCCC-----CCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceE-EEcCeEEEeccccH
Confidence 9999999999985 45679999 99999999999999999999999999999999999997 99999999999999
Q ss_pred CCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCC
Q 000504 670 IQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFS 749 (1458)
Q Consensus 670 i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~s 749 (1458)
|+||||||||+||.|||++||++|+++|+|++|++.+|.||+|+|||+|.||||||||||+||||+|+|+||||||||+|
T Consensus 593 I~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplS 672 (1381)
T KOG0054|consen 593 IQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLS 672 (1381)
T ss_pred hhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhhhcchHHHHHHHHhhhhccCCC
Q 000504 750 AVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVN 829 (1458)
Q Consensus 750 aLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 829 (1458)
|||+|+++|||++|+++.+++||+|+|||++++|++||+|++|+||+|.+.|+|+|+++ .+.++.++..+.+ .+..+
T Consensus 673 AVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~-~~~~~~~l~~~~~--~~~~~ 749 (1381)
T KOG0054|consen 673 AVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLK-SGGDFAELAHEEE--SEQEE 749 (1381)
T ss_pred hhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHh-cchhHHHHhhccc--hhhcc
Confidence 99999999999999999999999999999999999999999999999999999999997 7777777632221 11111
Q ss_pred CCCCCcccc---cCcc-----CccchhhhcccCCCCCCCCCCCCccchhhcCcchHHHHHHHHHHhhhhHHHHHHHHHHH
Q 000504 830 PPQEDKCLS---RVPC-----QMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYSAFITLVYKGALVPVILLCQV 901 (1458)
Q Consensus 830 ~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~ 901 (1458)
+........ ..+. ...+..++ +....+.+..+..++|+++.|.++|++|+.|+++.+|+..+++++++.+
T Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v 827 (1381)
T KOG0054|consen 750 EASEKDLESGESSRESESRSLESLSSEEE--KSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFV 827 (1381)
T ss_pred ccccccccccccccchhhhhhhhhccccc--ccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 000000000 0000 00000000 0011112245677788999999999999999999888888888888999
Q ss_pred HHHHHHhhhhhHHHhhccccc--c---cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccc
Q 000504 902 LFQALQMGSNYWIAWATDEKR--K---VSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPIS 976 (1458)
Q Consensus 902 ~~~~~~~~~~~wl~~~~~~~~--~---~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ 976 (1458)
+.++++++++||+++|++... . .+...|+++|+++++++.++.++|++.+...++++|+++|++|+++++|+||+
T Consensus 828 ~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~ 907 (1381)
T KOG0054|consen 828 LTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMS 907 (1381)
T ss_pred HHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch
Confidence 999999999999999996432 1 35678999999999999999999999999999999999999999999999999
Q ss_pred cccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 977 FFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELAR 1056 (1458)
Q Consensus 977 ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~r 1056 (1458)
|||+||+|||+||||+|++.+|..+|..+..++.++++++++++++++++|+++++++|+.++++++++||++++||++|
T Consensus 908 FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkR 987 (1381)
T KOG0054|consen 908 FFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKR 987 (1381)
T ss_pred hcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000504 1057 MVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLP 1136 (1458)
Q Consensus 1057 l~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~ 1136 (1458)
+++.+|||+++||+||+.|+.|||||++|++|.+++..++|.+++++|...+++||+++|+|+++++++++++++++..+
T Consensus 988 LesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~ 1067 (1381)
T KOG0054|consen 988 LESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLP 1067 (1381)
T ss_pred hhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888777
Q ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEE
Q 000504 1137 RSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQ 1216 (1458)
Q Consensus 1137 ~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~ 1216 (1458)
.+..+||.+|++++|+++++..++|++|+.+++|++|+|||||.||+++|+|+|+..+..+||++||++|+|+|+|+++|
T Consensus 1068 ~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~R 1147 (1381)
T KOG0054|consen 1068 SGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLR 1147 (1381)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEE
Confidence 66678999999999999999999999999999999999999999999999998887777779999999999999999999
Q ss_pred eCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCcc
Q 000504 1217 YNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQ 1296 (1458)
Q Consensus 1217 Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~ 1296 (1458)
|+|+.|+|||||||+|+||||||||||||||||||+++|||+.||.+|+|.|||+||+++++||||+++++|||||+||+
T Consensus 1148 Yrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFs 1227 (1381)
T KOG0054|consen 1148 YRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFS 1227 (1381)
T ss_pred eCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCC
Q 000504 1297 GTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASID 1376 (1458)
Q Consensus 1297 gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD 1376 (1458)
||+|+||||+++|+|+|||+|||+|+|+++|+++|+|||++|.|+|+|||.||||++||||||||++||||||||||++|
T Consensus 1228 GTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD 1307 (1381)
T KOG0054|consen 1228 GTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVD 1307 (1381)
T ss_pred CccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHhhcc
Q 000504 1377 TATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRRTS 1449 (1458)
Q Consensus 1377 ~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~~~~~ 1449 (1458)
++||..||++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|++|+++++|.|++++.+++.++.
T Consensus 1308 ~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~~~~~ 1380 (1381)
T KOG0054|consen 1308 PETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAALSSR 1380 (1381)
T ss_pred hHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999887653
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.1e-211 Score=2135.02 Aligned_cols=1414 Identities=31% Similarity=0.510 Sum_probs=1176.8
Q ss_pred hhhhhhhHHhHHHHHHHHHHHHHHHHHHhhcCCCcchhh--hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhc-cccc
Q 000504 8 ELVSADKVLESVNVAFFIGLFTRLWIEILKRRRDDGYIL--MARRAAGLVIVLCNVLIFILYMGFGFYEYWNFRI-VSFK 84 (1458)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 84 (1458)
...--|-++.++..+++++++...+....+.....+... ...+....+.++|+....+++...+... ....+ .+ +
T Consensus 30 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~ 107 (1622)
T PLN03130 30 TPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQRFCLRSKWYNYFLALLAAYCTAEPLFRLVMGISV-LNLDGQTS-L 107 (1622)
T ss_pred CccHHhhHHHHHHHHHHHHHHHHHHHHhccccccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hccccccc-c
Confidence 344456566666666666666555554422111111101 1222345556666666666654443332 11111 12 2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhc-----cccccchhHHHHHHHH---HHHHHHHHHHHHHHHHhhcCCCCccchhhHH
Q 000504 85 SVSLVVTWALATVVALCSRYYRTLG-----EHKRWPLVLVLWWVVH---LVIVLVCVSVYLLTHLSSIGLPHILPEAKAV 156 (1458)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1458)
...+...++.+++..+++++.+.++ +.+++++.+++||++. +++.+ . ........... ....+..+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~--~~~~~~~~ 181 (1622)
T PLN03130 108 PPFEIVSLIVEALTWCSMLVMIGVETKIYIREFRWYVRFAVIYVLVGDAVMLNL-V---LSVKEYYSSFV--LYLYISEV 181 (1622)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeehhHHHhhHHHHHHH-H---HHHHHHHhccc--cceehhHH
Confidence 3344443555666666522111111 1446799999999998 65554 2 11222222210 01122222
Q ss_pred HHHHHHHHHHhhcccccccccCCCCCCCCCCCC------ccccccccccCCCCcccCChhHHHHHHhHHHHHHhhccCCC
Q 000504 157 DFVSLPLLVLLCFNATYACCCARDPSDLDIPLL------REEDDEFLCKNISTFASAGVLSKITFHWLNQLFQRGRIQKL 230 (1458)
Q Consensus 157 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~p~~~a~~~s~~~f~Wl~~l~~~g~~~~L 230 (1458)
.+.+.+.+..+. .+.|..+. ..+.|.. .+.++.+.+.+++||++||+|||++|||++|++++||+++|
T Consensus 182 ~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L 255 (1622)
T PLN03130 182 AAQVLFGILLLV----YFPNLDPY--PGYTPIGSESVDDYEYEELPGGEQICPERHANIFSRIFFGWMTPLMQLGYKRPL 255 (1622)
T ss_pred HHHHHHHHHHHH----HHhcCCCC--cccccccccccccccccCCcccCCCCcccccCHHHHHHHHHHHHHHHHHhcCCC
Confidence 222221111100 01122221 0111100 01111233467799999999999999999999999999999
Q ss_pred CCCCCCCCCcCCcHHHHHHHHHHHHHhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 000504 231 ELLHIPPIPQSETANDASSLLEESLRKQKT-DATSLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKH 309 (1458)
Q Consensus 231 ~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~-~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~ 309 (1458)
+.+|||+|+++|+++.++++|++.|+++.+ ++|+|+++++++||+.+++.++++++..++.+++|++++.+++++.+++
T Consensus 256 ~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~ 335 (1622)
T PLN03130 256 TEKDVWKLDTWDQTETLYRSFQKCWDEELKKPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQFVGPLLLNLLLESMQNGE 335 (1622)
T ss_pred ChhhccCCChhhhHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999998754 5689999999999999999999999999999999999999999997644
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC---CHHHHHHHHHhhHHHHH
Q 000504 310 DHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLIYKRSMAIKFAGP---SSGIIINMINVDVERIG 386 (1458)
Q Consensus 310 ~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~iR~~L~~~Iy~K~L~ls~~~~---~~G~ivnlms~D~~ri~ 386 (1458)
. ... ||+++++++++.++.+++.++|++...++++++|+.+...||+|.++++.... ++|+++|+|++|++++.
T Consensus 336 ~--~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~ 412 (1622)
T PLN03130 336 P--AWI-GYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQ 412 (1622)
T ss_pred c--chH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHH
Confidence 2 334 78888777777777788888999999999999999999999999999987554 78999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 000504 387 DFFLYIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRV 466 (1458)
Q Consensus 387 ~~~~~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~ 466 (1458)
+++..+|.+|..|+++++++++||..+| +++++|++++++++|++..+++++++.++++|+.+|+|++.++|+|+|||+
T Consensus 413 ~~~~~l~~l~~~pl~ii~~~~lL~~~lg-~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~ 491 (1622)
T PLN03130 413 QICQQLHTLWSAPFRIIIAMVLLYQQLG-VASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDT 491 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 000504 467 LKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPI 546 (1458)
Q Consensus 467 IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl 546 (1458)
||+|+||+.|.+++++.|++|++..++..+..++..+++...|.++++++|++|.+.++++|++.+|++++++++++.|+
T Consensus 492 IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl 571 (1622)
T PLN03130 492 VKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPL 571 (1622)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888888888898889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcE
Q 000504 547 YNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSK 625 (1458)
Q Consensus 547 ~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~ 625 (1458)
..+|..+..+.++++|++||++||..+|..+... .+.......|+++|++|+|+.+ +..+.|+| |+++++|++
T Consensus 572 ~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~-~~~~~~~~~I~~~nvsf~y~~~-----~~~~vL~~inl~i~~Ge~ 645 (1622)
T PLN03130 572 FMLPNLITQAVNANVSLKRLEELLLAEERVLLPN-PPLEPGLPAISIKNGYFSWDSK-----AERPTLSNINLDVPVGSL 645 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC-CcccCCCCceEEEeeEEEccCC-----CCCceeeceeEEecCCCE
Confidence 9999999999999999999999998776321111 1111123469999999999854 34678999 999999999
Q ss_pred EEEEccCCCChhHHHHHHhCCccCCC-CcEEEECCEEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHH
Q 000504 626 VAVCGSVGSGKSSLLSSILGEIPRIS-GAAIKVHGKKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIE 704 (1458)
Q Consensus 626 ~~ivG~~GsGKSTLl~~llG~~~~~~-G~~i~~~g~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~ 704 (1458)
++|+||+|||||||+++|+|+++|.+ |++ .+++++|||+|+||++++||||||+||+++++++|++++++|+|++|++
T Consensus 646 vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I-~l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~ 724 (1622)
T PLN03130 646 VAIVGSTGEGKTSLISAMLGELPPRSDASV-VIRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLD 724 (1622)
T ss_pred EEEECCCCCCHHHHHHHHHHhhccCCCceE-EEcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHH
Confidence 99999999999999999999999999 886 8999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhc
Q 000504 705 MWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLD 784 (1458)
Q Consensus 705 ~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~ 784 (1458)
.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++++.+.+++||+|+|||++++++
T Consensus 725 ~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~ 804 (1622)
T PLN03130 725 LLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLS 804 (1622)
T ss_pred hCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred cCCEEEEEeCCeEEEcccchhhhhhcchHHHHHHHHhhhhccCCCCCCCCc-c-cccCccCc--cchhhhccc-CCCCCC
Q 000504 785 AADLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDK-C-LSRVPCQM--SQITEERFA-RPISCG 859 (1458)
Q Consensus 785 ~~D~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~--~~~~~~~~~-~~~~~~ 859 (1458)
.||+|++|+||+|++.|+++|+++ .+..+.++...+....+..+...+.. . ....+... .....+... +.....
T Consensus 805 ~aD~Ii~L~~G~i~e~Gt~~eL~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (1622)
T PLN03130 805 QVDRIILVHEGMIKEEGTYEELSN-NGPLFQKLMENAGKMEEYVEENGEEEDDQTSSKPVANGNANNLKKDSSSKKKSKE 883 (1622)
T ss_pred hCCEEEEEeCCEEEEeCCHHHHHh-cchhHHHHHHhcccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999987 56666666654321110000000000 0 00000000 000000000 000001
Q ss_pred CCCCCCccchhhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhccccc--ccccchhHHHHHHHH
Q 000504 860 EFSGRSQDEDTELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKR--KVSREQLIGVFIFLS 937 (1458)
Q Consensus 860 ~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~--~~~~~~~l~vy~~l~ 937 (1458)
......++|+++.|.++|++|+.|+++.++.+++.+++++.++.+++.+++++|+++|++... ......|+++|++++
T Consensus 884 ~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~ 963 (1622)
T PLN03130 884 GKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTHGPLFYNLIYALLS 963 (1622)
T ss_pred cchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHH
Confidence 112345678889999999999999999777666666666777888888999999999986322 122456788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHH
Q 000504 938 GGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLS 1017 (1458)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~ 1017 (1458)
++..++.+++.+++...+.++++++|.+++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++
T Consensus 964 ~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~ 1043 (1622)
T PLN03130 964 FGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLS 1043 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHH
Q 000504 1018 IIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLID 1097 (1458)
Q Consensus 1018 ~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d 1097 (1458)
.+++++.++|..+++++|+.++++.++++|.+++|+++|.+..+++|+++|+.|+++|+.|||+|+++++|.+.+.+..|
T Consensus 1044 ~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~ 1123 (1622)
T PLN03130 1044 TFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMD 1123 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHH
Confidence 99999988887777888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCC----CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000504 1098 DYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRS----AIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKM 1173 (1458)
Q Consensus 1098 ~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~----~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~ 1173 (1458)
.+.+..+.....++|++.++++++++++.+...+.+..... ...++.+|++++|++.+...+.++++.+.++|+.+
T Consensus 1124 ~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~ 1203 (1622)
T PLN03130 1124 NNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSL 1203 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998887666554443332211 11267889999999999999999999999999999
Q ss_pred hHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHH
Q 000504 1174 ISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQ 1253 (1458)
Q Consensus 1174 ~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~ 1253 (1458)
+|+||+.+|.+.|+|++...++..+++.||.+|.|+|+||+|+|+++.++||+|+||+|+||||||||||||||||||++
T Consensus 1204 ~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~ 1283 (1622)
T PLN03130 1204 NAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLN 1283 (1622)
T ss_pred HHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHH
Confidence 99999999999998876544445566789999999999999999988788999999999999999999999999999999
Q ss_pred HHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccc
Q 000504 1254 ALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRL 1333 (1458)
Q Consensus 1254 ~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~g 1333 (1458)
+|+|+++|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+|+|+||++++++++|.++|+|
T Consensus 1284 lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~~I~~lp~G 1363 (1622)
T PLN03130 1284 ALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIRRNSLG 1363 (1622)
T ss_pred HHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCcHHHHHhCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEE
Q 000504 1334 LDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVL 1413 (1458)
Q Consensus 1334 Ldt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVl 1413 (1458)
|||+|+|+|.|||||||||+||||||||+|+|||||||||+||.+||+.||++|++.+++||||+||||++|+++||||+
T Consensus 1364 Ldt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIl 1443 (1622)
T PLN03130 1364 LDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRIL 1443 (1622)
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCEEEEecChhHHhhcCCChHHHHHHHHHhh
Q 000504 1414 VLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRR 1447 (1458)
Q Consensus 1414 vL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~~~ 1447 (1458)
||++|+|+|+|+|++|+++++|.|++|+++.+..
T Consensus 1444 VLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~~ 1477 (1622)
T PLN03130 1444 VLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGAA 1477 (1622)
T ss_pred EEECCEEEEeCCHHHHHhCCCCHHHHHHHHcChh
Confidence 9999999999999999988789999999887653
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=6.8e-207 Score=2099.21 Aligned_cols=1415 Identities=30% Similarity=0.503 Sum_probs=1172.9
Q ss_pred hhhhhhhHHhHHHHHHHHHHHHHHHHHHhhcCCCcchhh--hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhc-cccc
Q 000504 8 ELVSADKVLESVNVAFFIGLFTRLWIEILKRRRDDGYIL--MARRAAGLVIVLCNVLIFILYMGFGFYEYWNFRI-VSFK 84 (1458)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 84 (1458)
...--|-++..+..+++++++...+....+++....+.. ...+....+.++|+....+++...+... ....+ .. +
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~ 107 (1495)
T PLN03232 30 TPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAKAQIYVLRKKYYNCVLGILACYCVVEPVLRLVMGISL-FDMDEETD-L 107 (1495)
T ss_pred CccHHhhHHHHHHHHHHHHHHHHHHHHHhhccccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hccccccc-c
Confidence 334456566666666666666555554432222211101 1222345556666666666553333222 11111 12 2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhc-----cccccchhHHHHHHHH---HHHHHHHHHHHHHHHHhhcCCCCccchhhHH
Q 000504 85 SVSLVVTWALATVVALCSRYYRTLG-----EHKRWPLVLVLWWVVH---LVIVLVCVSVYLLTHLSSIGLPHILPEAKAV 156 (1458)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1458)
...+...+..+++..+++++.+.++ +.+++++.+++||++. +++.+ . ........... ....+..+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~--~~~~~~~~ 181 (1495)
T PLN03232 108 PPFEVASLMVEAFAWFSMLVLIGLETKQYVKEFRWYVRFGVVYVLVADAVLLDL-V---LPLKNSINRTA--LYLCISSR 181 (1495)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeehhHhhhhHHHHHH-H---HHHHHHHhccc--cceehhHH
Confidence 3334443555666666622111122 1446799999999998 66555 2 11111111110 01122222
Q ss_pred HHHHHHHHHHhhcccccccccCCCCCCCC---CCCCc--cccccccccCCCCcccCChhHHHHHHhHHHHHHhhccCCCC
Q 000504 157 DFVSLPLLVLLCFNATYACCCARDPSDLD---IPLLR--EEDDEFLCKNISTFASAGVLSKITFHWLNQLFQRGRIQKLE 231 (1458)
Q Consensus 157 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~p~~~a~~~s~~~f~Wl~~l~~~g~~~~L~ 231 (1458)
.+.+.+.+..+. .+.|..+. +... .+..+ +.+..+.+.+++||++||+|||++|||++|++++||+++|+
T Consensus 182 ~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~f~w~~pl~~~g~~~~L~ 256 (1495)
T PLN03232 182 CCQALFGILLLV----YIPELDPY-PGYHILNNESLDNVEYDALRGGENICPERYASIFSRIYFSWMTPLMQLGYRKPIT 256 (1495)
T ss_pred HHHHHHHHHHHH----hcccCCCC-CcccccccccccccccccccccCCCCccccCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 222221111100 01122211 0000 00011 00112334678999999999999999999999999999999
Q ss_pred CCCCCCCCcCCcHHHHHHHHHHHHHhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 000504 232 LLHIPPIPQSETANDASSLLEESLRKQKT-DATSLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHD 310 (1458)
Q Consensus 232 ~~dl~~l~~~~~~~~~~~~~~~~w~~~~~-~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~ 310 (1458)
.+|||+|+++|+++.++++|++.|+++.+ ++++|+++++++||+.++..++++++.+++.+++|++++.+++++++++.
T Consensus 257 ~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~~ 336 (1495)
T PLN03232 257 EKDVWQLDQWDQTETLIKRFQRCWTEESRRPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFVGPVILSHLLQSMQEGDP 336 (1495)
T ss_pred hhhccCCChhhhHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999998754 46899999999999999999999999999999999999999999976442
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC---CHHHHHHHHHhhHHHHHH
Q 000504 311 HSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLIYKRSMAIKFAGP---SSGIIINMINVDVERIGD 387 (1458)
Q Consensus 311 ~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~iR~~L~~~Iy~K~L~ls~~~~---~~G~ivnlms~D~~ri~~ 387 (1458)
... |+.++++++++.++.+++.++|++...++++++|+.+...+|+|.++++.... ++|+++|+|++|++++.+
T Consensus 337 --~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~ 413 (1495)
T PLN03232 337 --AWV-GYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQ 413 (1495)
T ss_pred --cch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 334 88888888889999999999999999999999999999999999999987644 799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000504 388 FFLYIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVL 467 (1458)
Q Consensus 388 ~~~~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~I 467 (1458)
+..++|.+|..|+++++++++||..+| +++++|++++++++|++..+++++++.++++|+.+|+|.+.++|+++|||+|
T Consensus 414 ~~~~l~~l~~~p~~ii~~~~~l~~~lg-~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~I 492 (1495)
T PLN03232 414 IAEQLHGLWSAPFRIIVSMVLLYQQLG-VASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTV 492 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000504 468 KLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIY 547 (1458)
Q Consensus 468 Kl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~ 547 (1458)
|+|+||+.|.+++++.|++|++..++..+..+...++....|.++++++|++|.+.++++|++.+|+++++++.+..|+.
T Consensus 493 K~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~ 572 (1495)
T PLN03232 493 KCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLN 572 (1495)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888887777788888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEE
Q 000504 548 NLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKV 626 (1458)
Q Consensus 548 ~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~ 626 (1458)
.+|..+..+.++++|++||++||+.+|+.+... .+.......|+++|++|+|+.+ ++.++|+| ||++++||++
T Consensus 573 ~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~-~~~~~~~~~I~~~~vsF~y~~~-----~~~~vL~~inl~i~~Ge~v 646 (1495)
T PLN03232 573 MLPNLLSQVVNANVSLQRIEELLLSEERILAQN-PPLQPGAPAISIKNGYFSWDSK-----TSKPTLSDINLEIPVGSLV 646 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcccccccc-CCcCCCCCcEEEEeeEEEcCCC-----CCCceeeeeEEEEcCCCEE
Confidence 999999999999999999999998776321111 1111123469999999999854 34678999 9999999999
Q ss_pred EEEccCCCChhHHHHHHhCCccCCCCcEEEECCEEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhh
Q 000504 627 AVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGKKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMW 706 (1458)
Q Consensus 627 ~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l 706 (1458)
+|+||+|||||||+++|+|+++|.+|++..+++.+|||+|+||++++||||||+||+++++++|++++++|+|.+|++.+
T Consensus 647 aIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~L 726 (1495)
T PLN03232 647 AIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLL 726 (1495)
T ss_pred EEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhC
Confidence 99999999999999999999999999877889999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccC
Q 000504 707 ADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAA 786 (1458)
Q Consensus 707 ~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~ 786 (1458)
|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++++.+.+++||+|+|||+++.++.|
T Consensus 727 p~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~a 806 (1495)
T PLN03232 727 PGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLM 806 (1495)
T ss_pred CCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhC
Confidence 99999999999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred CEEEEEeCCeEEEcccchhhhhhcchHHHHHHHHhhhhccCCCCCC-CCcccccCccCccchhhhcccCCC-CCCCCCCC
Q 000504 787 DLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQ-EDKCLSRVPCQMSQITEERFARPI-SCGEFSGR 864 (1458)
Q Consensus 787 D~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 864 (1458)
|+|++|+||+|++.|+++|+.+ .+..+.++...+....+..+..+ .+......+.......++...... .+......
T Consensus 807 D~Ii~L~~G~i~~~Gt~~eL~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (1495)
T PLN03232 807 DRIILVSEGMIKEEGTFAELSK-SGSLFKKLMENAGKMDATQEVNTNDENILKLGPTVTIDVSERNLGSTKQGKRGRSVL 885 (1495)
T ss_pred CEEEEEeCCEEEEecCHHHHHh-cchhHHHHHHhcccccccccccccccccccccccccccccccccccccccccchhhh
Confidence 9999999999999999999987 55666666544321111000000 000000000000000000000000 00011234
Q ss_pred CccchhhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhccccc--ccccchhHHHHHHHHHHHHH
Q 000504 865 SQDEDTELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKR--KVSREQLIGVFIFLSGGSSF 942 (1458)
Q Consensus 865 ~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~--~~~~~~~l~vy~~l~~~~~~ 942 (1458)
.++|+++.|.++|++|+.|+++.++++.+.+++++.++.+++.+++++|+++|++... ......|+++|++++++..+
T Consensus 886 ~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~l~~y~~l~~~~~~ 965 (1495)
T PLN03232 886 VKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPKSYSPGFYIVVYALLGFGQVA 965 (1495)
T ss_pred hhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHH
Confidence 6678889999999999999999877666666666777788888999999999985321 22346789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000504 943 FILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILM 1022 (1458)
Q Consensus 943 ~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~ 1022 (1458)
+.+++.+++...+.++++++|++++++++++|++|||++|+|+++||+++|++.+|..++..+..++..++.+++.++++
T Consensus 966 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~ 1045 (1495)
T PLN03232 966 VTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALI 1045 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHH
Q 000504 1023 SQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCV 1102 (1458)
Q Consensus 1023 ~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~ 1102 (1458)
+..++...++++|+.++++.++.+|.+++|+++|.+..+++|+++|++|+++|+.|||+|+++++|.+++.+..|.+.+.
T Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~ 1125 (1495)
T PLN03232 1046 GTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRF 1125 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 88887777777788777788889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000504 1103 TFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAI-----DPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVE 1177 (1458)
Q Consensus 1103 ~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sve 1177 (1458)
.+.....++|+..++++++.+++.+...+.+.. .+.. .++.+|++++|+..+...+.++++.+.++|+.++|+|
T Consensus 1126 ~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~e 1204 (1495)
T PLN03232 1126 TLANTSSNRWLTIRLETLGGVMIWLTATFAVLR-NGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVE 1204 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999889999999999988766555444433322 2221 2567888999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhc
Q 000504 1178 RILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFR 1257 (1458)
Q Consensus 1178 Ri~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~r 1257 (1458)
|+.+|.+.|+|++...+...+++.||..|.|+|+||+|+|+++.++||+|+||+|+||||||||||||||||||+++|+|
T Consensus 1205 Ri~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~r 1284 (1495)
T PLN03232 1205 RVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFR 1284 (1495)
T ss_pred HHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 99999999888654333344566899999999999999998877889999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCcc
Q 000504 1258 VVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAP 1337 (1458)
Q Consensus 1258 l~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~ 1337 (1458)
+++|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+|+|+||++++++++|+++|+||||+
T Consensus 1285 l~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~ 1364 (1495)
T PLN03232 1285 IVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAE 1364 (1495)
T ss_pred CCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCCHHHHHhCcCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeC
Q 000504 1338 VAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDE 1417 (1458)
Q Consensus 1338 v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~ 1417 (1458)
|+|+|.|||||||||+||||||||+|+|||||||||+||++||+.||++|++.+++||||+||||++|+++||||+||++
T Consensus 1365 v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1365 VSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSS 1444 (1495)
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecChhHHhhcCCChHHHHHHHHHhh
Q 000504 1418 GKVLEYDSPRQLLEDNSSSFSKLVAEFLRR 1447 (1458)
Q Consensus 1418 G~ivE~g~p~~Ll~~~~s~F~~l~~~~~~~ 1447 (1458)
|+|+|+|+|+||+++++|.|++|+++....
T Consensus 1445 G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1445 GQVLEYDSPQELLSRDTSAFFRMVHSTGPA 1474 (1495)
T ss_pred CEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 999999999999998888999999887654
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=6.7e-204 Score=2072.29 Aligned_cols=1232 Identities=33% Similarity=0.591 Sum_probs=1097.8
Q ss_pred cCCCCcccCChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCcCCcHHHHHHHHHHHHHhhcc------------------
Q 000504 199 KNISTFASAGVLSKITFHWLNQLFQRGRIQKLELLHIPPIPQSETANDASSLLEESLRKQKT------------------ 260 (1458)
Q Consensus 199 ~~~~p~~~a~~~s~~~f~Wl~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~------------------ 260 (1458)
.+.+||++||++||++|||+||++++|||++|+.+|||+++++|+++.++++|++.|+++.+
T Consensus 199 ~~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 278 (1522)
T TIGR00957 199 PNPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLNKEDTSEMVVPVLVENWKKECKKTRKQPVSAVYGKKDPSK 278 (1522)
T ss_pred CCCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCCHhHhHHHHHHHHHHHHHHHHhhccccccccccccccccc
Confidence 45689999999999999999999999999999999999999999999999999999986510
Q ss_pred ------------------------CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHH
Q 000504 261 ------------------------DATSLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHY 316 (1458)
Q Consensus 261 ------------------------~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~ 316 (1458)
++++|+++++++||+.++..++++++.+++.+++|++++.+++|+.++.. ....
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~-~~~~- 356 (1522)
T TIGR00957 279 PKGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMA-PDWQ- 356 (1522)
T ss_pred ccccccccccccccccccccccccCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-ccch-
Confidence 23689999999999999999999999999999999999999999976543 2234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC---CHHHHHHHHHhhHHHHHHHHHHHH
Q 000504 317 GLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLIYKRSMAIKFAGP---SSGIIINMINVDVERIGDFFLYIH 393 (1458)
Q Consensus 317 g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~iR~~L~~~Iy~K~L~ls~~~~---~~G~ivnlms~D~~ri~~~~~~~~ 393 (1458)
||++++++++..++.+++.+||+|...++|+++|++|+..||+|+|+++.... ++|+++|+|++|++|+.++..++|
T Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~ 436 (1522)
T TIGR00957 357 GYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYIN 436 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999987655 889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccH
Q 000504 394 RIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWE 473 (1458)
Q Consensus 394 ~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE 473 (1458)
.+|..|+++++++++||..+| +++++|++++++++|++..+++.++++++++|+.+|+|++.++|+|+|||.||+|+||
T Consensus 437 ~~~~~~~~i~~~~~ll~~~~g-~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e 515 (1522)
T TIGR00957 437 MIWSAPLQVILALYFLWLNLG-PSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWE 515 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 474 QEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWASPTLVSVITFGVCILL--KTPLTSGAVLSALATFRILQEPIYNLPE 551 (1458)
Q Consensus 474 ~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p~~v~~~tF~~~~~~--~~~L~~~~vft~lalf~~l~~pl~~lp~ 551 (1458)
+.|.+++++.|++|++..++..+...+..+.++.+|.++.+++|++|.+. ++.|+++.+|+++++|++++.|+..+|.
T Consensus 516 ~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~ 595 (1522)
T TIGR00957 516 LAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPM 595 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888888888889999999999998876 4679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCC-CCCCCCCCC-CCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEE
Q 000504 552 LISMIAQTKVSLYRIQEFIKEDNQ-KKPITEPTS-KASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAV 628 (1458)
Q Consensus 552 ~i~~~~~a~vS~~RI~~fL~~~e~-~~~~~~~~~-~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~i 628 (1458)
.+..+.++++|++||++||+.+|. ++..+.... ......|+++|++|+|+.+ ..+.|+| |+++++|++++|
T Consensus 596 ~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------~~~~l~~isl~i~~G~~v~I 669 (1522)
T TIGR00957 596 VISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKPGEGNSITVHNATFTWARD------LPPTLNGITFSIPEGALVAV 669 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcccccccccccccCCCCCCcEEEEEeEEEcCCC------CCceeeeeEEEEcCCCEEEE
Confidence 999999999999999999987662 221111111 1112369999999999753 3578999 999999999999
Q ss_pred EccCCCChhHHHHHHhCCccCCCCcEEEECCEEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcC
Q 000504 629 CGSVGSGKSSLLSSILGEIPRISGAAIKVHGKKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWAD 708 (1458)
Q Consensus 629 vG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~ 708 (1458)
+||||||||||+++|+|+++|++|++ .++|++|||+|+||++++||+|||.||.++++++|++++++|++.+|++.+|+
T Consensus 670 vG~~GsGKSTLl~~l~g~~~~~~G~i-~~~g~i~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~ 748 (1522)
T TIGR00957 670 VGQVGCGKSSLLSALLAEMDKVEGHV-HMKGSVAYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPS 748 (1522)
T ss_pred ECCCCCCHHHHHHHHhCCCccCCcEE-EECCEEEEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCC
Confidence 99999999999999999999999997 89999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHH--HHHhCCcEEEEEecccchhccC
Q 000504 709 GDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCL--MGLLSQKTVLYTTHQLEFLDAA 786 (1458)
Q Consensus 709 gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~--~~~~~~~tvilvtH~~~~l~~~ 786 (1458)
||+|.+|++|.+|||||||||+||||+|++||+||||||||+||+++++++++.++ .+.++++|+|+|||++++++.|
T Consensus 749 g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~ 828 (1522)
T TIGR00957 749 GDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQV 828 (1522)
T ss_pred CCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhC
Confidence 99999999999999999999999999999999999999999999999999999887 3566789999999999999999
Q ss_pred CEEEEEeCCeEEEcccchhhhhhcchHHHHHHHHhhhhccCC--CCC------CCCcccc--c----------Ccc-C--
Q 000504 787 DLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQV--NPP------QEDKCLS--R----------VPC-Q-- 843 (1458)
Q Consensus 787 D~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~--~----------~~~-~-- 843 (1458)
|+|++|++|+|++.|+++++.+ .+..+.++...+....+.. +.. .+..... . .+. +
T Consensus 829 D~ii~l~~G~i~~~g~~~~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1522)
T TIGR00957 829 DVIIVMSGGKISEMGSYQELLQ-RDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQL 907 (1522)
T ss_pred CEEEEecCCeEEeeCCHHHHHh-cchhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhc
Confidence 9999999999999999999987 5555666554322111000 000 0000000 0 000 0
Q ss_pred --ccc-hhh-hc----c---cCCCCCCCCCCCCccchhhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhh
Q 000504 844 --MSQ-ITE-ER----F---ARPISCGEFSGRSQDEDTELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNY 912 (1458)
Q Consensus 844 --~~~-~~~-~~----~---~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1458)
... ... ++ . ..........+..++|+++.|++++++|+.|+++.+. ..+++++++.++.+++.+++++
T Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~ 986 (1522)
T TIGR00957 908 SASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKAIGL-FITFLSIFLFVCNHVSALASNY 986 (1522)
T ss_pred cccccccccccccccccccccccccccchhhhHHHHHHhcCcccHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000 00 0 0000000112344567788999999999999998753 4444555556677888899999
Q ss_pred HHHhhccccc----ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHH
Q 000504 913 WIAWATDEKR----KVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILN 988 (1458)
Q Consensus 913 wl~~~~~~~~----~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~iln 988 (1458)
|+++|.+... ..+...|+++|++++++..++.+++.++....+.++++++|++++++++++|++|||++|+|+|+|
T Consensus 987 ~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~iln 1066 (1522)
T TIGR00957 987 WLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVN 1066 (1522)
T ss_pred HHHHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHH
Confidence 9999986321 122456788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHH
Q 000504 989 RCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHH 1068 (1458)
Q Consensus 989 R~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~ 1068 (1458)
||++|++.+|..+|..+..++..++.+++.++++++.+|.++++++|+++++++++++|.+++|+++|++.++++|+++|
T Consensus 1067 R~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~ 1146 (1522)
T TIGR00957 1067 RFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSH 1146 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999999888988888888888888999999999999999999999999999
Q ss_pred HHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHH
Q 000504 1069 FSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLA 1148 (1458)
Q Consensus 1069 ~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~ 1148 (1458)
+.|+++|+.|||+|++|++|.+++.+..|.++++.+.....++|+..++++++.++++++..+.+ ...+.+++|.+|++
T Consensus 1147 ~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~g~l~~~ 1225 (1522)
T TIGR00957 1147 FNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNCIVLFAALFAV-ISRHSLSAGLVGLS 1225 (1522)
T ss_pred HHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988765554444333 33567899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeee
Q 000504 1149 ATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGI 1228 (1458)
Q Consensus 1149 l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~i 1228 (1458)
++|++.+...+.++++.+.++|+.++|+||+.+|.+.|+|.+...+...++++||..|.|+|+||+|+|+++.++||+|+
T Consensus 1226 l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~i 1305 (1522)
T TIGR00957 1226 VSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHI 1305 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccce
Confidence 99999999999999999999999999999999999988876533334456678999999999999999988777899999
Q ss_pred eEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCCC
Q 000504 1229 TCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQ 1308 (1458)
Q Consensus 1229 s~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~ 1308 (1458)
||+|+||||||||||||||||||+++|+|+++|++|+|.|||+||+++++++||++|++|||||+||+||||+||||+++
T Consensus 1306 s~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~ 1385 (1522)
T TIGR00957 1306 NVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQ 1385 (1522)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHH
Q 000504 1309 HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIR 1388 (1458)
Q Consensus 1309 ~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~ 1388 (1458)
++|+|||+||++|+++++|.++|+||||+|+|+|.|||||||||+||||||||+|+|||||||||+||.+||+.||++|+
T Consensus 1386 ~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~ 1465 (1522)
T TIGR00957 1386 YSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIR 1465 (1522)
T ss_pred CCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHH
Q 000504 1389 EETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEF 1444 (1458)
Q Consensus 1389 ~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~ 1444 (1458)
+.+++||||+||||++|+++||||+|||+|+|+|+|+|+||+++ +|.|++|+++.
T Consensus 1466 ~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1466 TQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred HHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHc
Confidence 99999999999999999999999999999999999999999986 69999999874
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=7.4e-199 Score=2015.93 Aligned_cols=1234 Identities=27% Similarity=0.467 Sum_probs=1081.4
Q ss_pred CCCcccCChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCcCCcHHHHHHHHHHHHHhhc---cCCCChHHHHHHHHHHHH
Q 000504 201 ISTFASAGVLSKITFHWLNQLFQRGRIQKLELLHIPPIPQSETANDASSLLEESLRKQK---TDATSLPQVIIHAVWKSL 277 (1458)
Q Consensus 201 ~~p~~~a~~~s~~~f~Wl~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~---~~~~~l~~~l~~~~~~~~ 277 (1458)
.+||++||+|||++|||+||++++||+++|+.+|||+|+++|+++.++++|++.|+++. .++++|+++++++|++.+
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~~l~~~~~~~~ 82 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELASAKKNPKLLNALRRCFFWRF 82 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999998753 245899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 278 ALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLI 357 (1458)
Q Consensus 278 ~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~iR~~L~~~I 357 (1458)
++.++++++.+++.+++|++++.+++|++.++. .....||+++++++++.++++++.++++|...++|+++|++|+.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~i 161 (1490)
T TIGR01271 83 VFYGILLYFGEATKAVQPLLLGRIIASYDPFNA-PEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLI 161 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999964332 2222389999999999999999999999999999999999999999
Q ss_pred HHHhcccccCCC---CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000504 358 YKRSMAIKFAGP---SSGIIINMINVDVERIGDFFLYIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTP 434 (1458)
Q Consensus 358 y~K~L~ls~~~~---~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~~~~~~~ 434 (1458)
|+|+|+++..+. ++|+++|+|++|++++.+++.++|.+|..|+++++++++||.++| +++++|++++++++|++.+
T Consensus 162 y~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G-~~~l~~l~v~~~~~~~~~~ 240 (1490)
T TIGR01271 162 YKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLE-VNGFCGLGFLILLALFQAC 240 (1490)
T ss_pred HHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 999999986544 789999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 435 LANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWASPTLVSV 514 (1458)
Q Consensus 435 ~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p~~v~~ 514 (1458)
+++.+.++|+++|+++|+|++.++|+|+|||+||+|+||+.|.++|+++|++|++.+++..+..+...++++..|.++++
T Consensus 241 ~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1490)
T TIGR01271 241 LGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVF 320 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888888888999999999
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccEEE
Q 000504 515 ITFGVCILLKTPLTSGAVLSALATFRILQEPIY-NLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKASDVAIDI 593 (1458)
Q Consensus 515 ~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~-~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~I~i 593 (1458)
++|++|.+.++ ++++++||++++|++++.|+. .+|..+..+.++++|++||++||..+|..+... ......+++
T Consensus 321 ~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~----~~~~~~i~~ 395 (1490)
T TIGR01271 321 LSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY----NLTTTEVEM 395 (1490)
T ss_pred HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc----cCCCCceEE
Confidence 99999988754 789999999999999999985 799999999999999999999998877322111 111236999
Q ss_pred eeeEEEeCCcc--------cc------cC------------CCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCC
Q 000504 594 EAGEYAWDARE--------EN------FK------------KPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGE 646 (1458)
Q Consensus 594 ~~~~fsw~~~~--------~~------~~------------~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~ 646 (1458)
+|++|+|+... .. .+ ...+.|+| |+++++|++++|+|||||||||||++|+|+
T Consensus 396 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~ 475 (1490)
T TIGR01271 396 VNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGE 475 (1490)
T ss_pred ecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 99999996420 00 00 02467999 999999999999999999999999999999
Q ss_pred ccCCCCcEEEECCEEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHH
Q 000504 647 IPRISGAAIKVHGKKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1458)
Q Consensus 647 ~~~~~G~~i~~~g~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 726 (1458)
++|++|++ .++|++|||+|+||++++||+|||+||.++++++|++++++|+|.+|++.+|+||.|.+|++|.+||||||
T Consensus 476 ~~~~~G~i-~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqk 554 (1490)
T TIGR01271 476 LEPSEGKI-KHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQR 554 (1490)
T ss_pred CCCCCceE-EECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHH
Confidence 99999997 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhh
Q 000504 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDL 806 (1458)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l 806 (1458)
|||+||||+|++|++|||||||||||+++++++++.|+.+.++++|+|+|||++++++.||+|++|++|+|.+.|+++++
T Consensus 555 qRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l 634 (1490)
T TIGR01271 555 ARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSEL 634 (1490)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999999999999999888887789999999999999999999999999999999999999
Q ss_pred hhhcchHHHHHHHHhh---h----h-------------cc----------CC-----CCCCC--Cc--------------
Q 000504 807 IADQNSELVRQMKAHR---K----S-------------LD----------QV-----NPPQE--DK-------------- 835 (1458)
Q Consensus 807 ~~~~~~~~~~~~~~~~---~----~-------------~~----------~~-----~~~~~--~~-------------- 835 (1458)
.+ .+..+........ + . .. .. .+..+ ..
T Consensus 635 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (1490)
T TIGR01271 635 QA-KRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASAR 713 (1490)
T ss_pred Hh-cChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 86 4444444332100 0 0 00 00 00000 00
Q ss_pred ---------------c-c--ccCcc--------C-------ccchh---------------------h-----h-c----
Q 000504 836 ---------------C-L--SRVPC--------Q-------MSQIT---------------------E-----E-R---- 851 (1458)
Q Consensus 836 ---------------~-~--~~~~~--------~-------~~~~~---------------------~-----~-~---- 851 (1458)
. . ...+. . ..... . . +
T Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1490)
T TIGR01271 714 KFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQ 793 (1490)
T ss_pred ccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccc
Confidence 0 0 00000 0 00000 0 0 0
Q ss_pred --ccC-------------------C-CCC------------CCCCCCCccchhhcCcchHHHHHHHHHHhhhhHHHHHHH
Q 000504 852 --FAR-------------------P-ISC------------GEFSGRSQDEDTELGRVKWTVYSAFITLVYKGALVPVIL 897 (1458)
Q Consensus 852 --~~~-------------------~-~~~------------~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~ 897 (1458)
..+ . ... .......++|+++.|.++|++|+.|+++.+++.++.+++
T Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~ 873 (1490)
T TIGR01271 794 TSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFC 873 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHH
Confidence 000 0 000 000112445677889999999999999886656655656
Q ss_pred HHHHHHHHHHhhhhhHHHhhcccc--------cc------------c-ccchh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 898 LCQVLFQALQMGSNYWIAWATDEK--------RK------------V-SREQL-IGVFIFLSGGSSFFILGRAVLLATIA 955 (1458)
Q Consensus 898 ~~~~~~~~~~~~~~~wl~~~~~~~--------~~------------~-~~~~~-l~vy~~l~~~~~~~~~~~~~~~~~~~ 955 (1458)
++.++.+++..++++|+.+|.... +. . ...+| +++|++++++..++.+++.+++...+
T Consensus 874 ~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1490)
T TIGR01271 874 LVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTL 953 (1490)
T ss_pred HHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667788899999999998775311 00 0 11122 45555666556677888999999999
Q ss_pred HHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000504 956 IKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLV 1035 (1458)
Q Consensus 956 ~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p 1035 (1458)
.++++++|.+++++++++|++|||++|+|+|+|||++|++.+|..+|..+..++..++.+++.++++++.+|+++++++|
T Consensus 954 ~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~ 1033 (1490)
T TIGR01271 954 LTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIP 1033 (1490)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHH
Q 000504 1036 ILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCL 1115 (1458)
Q Consensus 1036 ~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~ 1115 (1458)
+++++++++++|.+++|++++++..+++|+++|+.|++.|+.|||+|+++++|.+++.+..|.+++.++.....++|+..
T Consensus 1034 l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 1113 (1490)
T TIGR01271 1034 VAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQM 1113 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccC-
Q 000504 1116 RINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIK- 1194 (1458)
Q Consensus 1116 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~- 1194 (1458)
++++++.+.+..++++.+. ...+++|.+|++++|++.+...+.++++.+.++|+.+.|+||+.+|.+.|+|.+...+
T Consensus 1114 ~~~~i~~~~~~~~~~l~~~--~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~ 1191 (1490)
T TIGR01271 1114 RIDIIFVFFFIAVTFIAIG--TNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGG 1191 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHH--HhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccc
Confidence 9998876654443333222 2235678899999999999999999999999999999999999999998877542111
Q ss_pred -------------CCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC
Q 000504 1195 -------------NSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP 1261 (1458)
Q Consensus 1195 -------------~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p 1261 (1458)
...+|+.||..|.|+|+||+++|+++.++||+|+||+|+||||||||||||||||||+++|+|+++
T Consensus 1192 ~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~- 1270 (1490)
T TIGR01271 1192 GGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS- 1270 (1490)
T ss_pred ccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-
Confidence 123456799999999999999999877899999999999999999999999999999999999998
Q ss_pred CCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCC
Q 000504 1262 SGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAED 1341 (1458)
Q Consensus 1262 ~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~ 1341 (1458)
++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+++|+||+++++++++.++|+||||+|+|+
T Consensus 1271 ~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~ 1350 (1490)
T TIGR01271 1271 TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG 1350 (1490)
T ss_pred CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccccccccC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEE
Q 000504 1342 GENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVL 1421 (1458)
Q Consensus 1342 G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~iv 1421 (1458)
|.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.+++||||+||||++++.+||||+||++|+|+
T Consensus 1351 G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~iv 1430 (1490)
T TIGR01271 1351 GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSSVK 1430 (1490)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecChhHHhhcCCChHHHHHHHHHhh
Q 000504 1422 EYDSPRQLLEDNSSSFSKLVAEFLRR 1447 (1458)
Q Consensus 1422 E~g~p~~Ll~~~~s~F~~l~~~~~~~ 1447 (1458)
|+|+|++|++ ++|.|++|+++....
T Consensus 1431 E~g~p~~Ll~-~~~~f~~l~~~~~~~ 1455 (1490)
T TIGR01271 1431 QYDSIQKLLN-ETSLFKQAMSAADRL 1455 (1490)
T ss_pred EeCCHHHHHc-CCcHHHHHHHHhChh
Confidence 9999999996 589999999987653
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.7e-189 Score=1920.98 Aligned_cols=1242 Identities=29% Similarity=0.479 Sum_probs=1078.1
Q ss_pred CCCCcccCChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCcCCcHHHHHHHHHHH----------HHhhcc---------
Q 000504 200 NISTFASAGVLSKITFHWLNQLFQRGRIQKLELLHIPPIPQSETANDASSLLEES----------LRKQKT--------- 260 (1458)
Q Consensus 200 ~~~p~~~a~~~s~~~f~Wl~~l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~----------w~~~~~--------- 260 (1458)
.+.||++||||.++++.|++|++.+..|..|+.+|+|+...+.++-++..++.+. |+-...
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1560)
T PTZ00243 58 TPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLDA 137 (1560)
T ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeeccc
Confidence 4579999999999999999999999999999999999999999986665554433 321000
Q ss_pred --------------------------------C-----------------------------------------------
Q 000504 261 --------------------------------D----------------------------------------------- 261 (1458)
Q Consensus 261 --------------------------------~----------------------------------------------- 261 (1458)
+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (1560)
T PTZ00243 138 SSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSST 217 (1560)
T ss_pred cccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeeccc
Confidence 0
Q ss_pred -------------CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHH
Q 000504 262 -------------ATSLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAK 328 (1458)
Q Consensus 262 -------------~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~ 328 (1458)
..+|+|+++++||+.+++.++++++.+++.+++|++++.+++|+++++. .+..|++++++++++.
T Consensus 218 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~--~~~~g~~l~~~l~~~~ 295 (1560)
T PTZ00243 218 GSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNA--TWGRGLGLVLTLFLTQ 295 (1560)
T ss_pred ccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--chhHHHHHHHHHHHHH
Confidence 0379999999999999999999999999999999999999999976543 3334888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC-----CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000504 329 TVESLTQRQWYFGANRIGIRVRSALTVLIYKRSMAIKFAGP-----SSGIIINMINVDVERIGDFFLYIHRIWLLPVQVF 403 (1458)
Q Consensus 329 ~~~~l~~~~~~~~~~r~g~~iR~~L~~~Iy~K~L~ls~~~~-----~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~ 403 (1458)
++++++.++|+|...+.|+++|++|.+.||+|+++++..+. ++|+|+|+|++|++++.+++.++|.+|.+|++++
T Consensus 296 ~~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li 375 (1560)
T PTZ00243 296 LIQSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLL 375 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987532 7899999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHH
Q 000504 404 LALVILYKNLGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRL 483 (1458)
Q Consensus 404 ~al~lL~~~lG~~a~l~gl~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~ 483 (1458)
+++++||..+| +++++|++++++++|++.++++++.++++++|+++|+|++.++|+++|||+||+||||+.|.++|++.
T Consensus 376 ~~~~lL~~~lG-~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~ 454 (1560)
T PTZ00243 376 LSILLLSRLVG-WCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDK 454 (1560)
T ss_pred HHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 484 REIERDSLKKYLYTCSAIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSL 563 (1458)
Q Consensus 484 R~~El~~l~k~~~~~a~~~~~~~~~p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~ 563 (1458)
|++|++.+++..+..++..++.+++|.++.+++|++|++.|++||++.+||++++|++++.|+.++|..++.+.++++|+
T Consensus 455 R~~El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~ 534 (1560)
T PTZ00243 455 RARELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSI 534 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccCC-CCCC----CC-----CCCC------------------------------------------------
Q 000504 564 YRIQEFIKEDNQ-KKPI----TE-----PTSK------------------------------------------------ 585 (1458)
Q Consensus 564 ~RI~~fL~~~e~-~~~~----~~-----~~~~------------------------------------------------ 585 (1458)
+||++||..+|. .+.. +. ....
T Consensus 535 ~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (1560)
T PTZ00243 535 KRISTFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTK 614 (1560)
T ss_pred HHHHHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhcccccccccc
Confidence 999999987661 1000 00 0000
Q ss_pred -CCCccEEEeeeEEEeCCccc--------------------c-----------c-CCCcccccC-cEEeeCCcEEEEEcc
Q 000504 586 -ASDVAIDIEAGEYAWDAREE--------------------N-----------F-KKPTIKLTD-KMKIMKGSKVAVCGS 631 (1458)
Q Consensus 586 -~~~~~I~i~~~~fsw~~~~~--------------------~-----------~-~~~~~~L~~-~l~i~~G~~~~ivG~ 631 (1458)
.....+.++|++|+|+.... . + ..+.+.|+| ||++++|++++|+||
T Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~ 694 (1560)
T PTZ00243 615 RHPSPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGA 694 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECC
Confidence 00123556666666642110 0 0 012457999 999999999999999
Q ss_pred CCCChhHHHHHHhCCccCCCCcEEEECCEEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCc
Q 000504 632 VGSGKSSLLSSILGEIPRISGAAIKVHGKKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDL 711 (1458)
Q Consensus 632 ~GsGKSTLl~~llG~~~~~~G~~i~~~g~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~ 711 (1458)
|||||||||++|+|+++|++|++ .+++.+|||+|+||++++||+|||.|+.++++++|++++++|++++|++.+|+|+.
T Consensus 695 nGsGKSTLL~~i~G~~~~~~G~i-~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~ 773 (1560)
T PTZ00243 695 TGSGKSTLLQSLLSQFEISEGRV-WAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLE 773 (1560)
T ss_pred CCCcHHHHHHHHhcCCCCCCcEE-EECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccch
Confidence 99999999999999999999997 78899999999999999999999999998888999999999999999999999999
Q ss_pred ccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEE
Q 000504 712 SVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLV 791 (1458)
Q Consensus 712 t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~ 791 (1458)
|.+|++|.+|||||||||+||||+|++|++||||||||+||++++++++++++.+.++++|+|+|||++++++.||+|++
T Consensus 774 t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~ 853 (1560)
T PTZ00243 774 TEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVA 853 (1560)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEE
Confidence 99999999999999999999999999999999999999999999999999888777789999999999999999999999
Q ss_pred EeCCeEEEcccchhhhhhcchHHHHHHHHhhhhcc--CCCCCCCC-ccc--ccCccCccc--hhhhcc--cC--CCCCCC
Q 000504 792 MKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLD--QVNPPQED-KCL--SRVPCQMSQ--ITEERF--AR--PISCGE 860 (1458)
Q Consensus 792 l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~--~~~~~~~~~--~~~~~~--~~--~~~~~~ 860 (1458)
|++|++.+.|+++++.+ .+ .+..+........+ ......+. ... ...+..... ..+... .. ......
T Consensus 854 l~~G~i~~~G~~~~l~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1560)
T PTZ00243 854 LGDGRVEFSGSSADFMR-TS-LYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAA 931 (1560)
T ss_pred EECCEEEEecCHHHHHh-Ch-HHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999986 32 34444332111100 00000000 000 000000000 000000 00 000111
Q ss_pred CCCCCccchhhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHH
Q 000504 861 FSGRSQDEDTELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGS 940 (1458)
Q Consensus 861 ~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~ 940 (1458)
..++.++|+++.|.++|++|+.|++..++...+.+++++.++.+++..++++|+++|++.....+...|+++|+++.++.
T Consensus 932 ~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~l~~y~~~~~~~ 1011 (1560)
T PTZ00243 932 AGRLMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSFKLSAATYLYVYLGIVLLG 1011 (1560)
T ss_pred cchhhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcccHHHHHHHHHHHH
Confidence 23455677888999999999999999876665555555666778888899999999886443344567888999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHH
Q 000504 941 SFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIII 1020 (1458)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~ 1020 (1458)
.++.+++.+.....+.++++++|++++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++.++
T Consensus 1012 ~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li 1091 (1560)
T PTZ00243 1012 TFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSIL 1091 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Q 000504 1021 LMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYS 1100 (1458)
Q Consensus 1021 v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~ 1100 (1458)
++++..|.++++++|+.++++.++++|.+..|+++|....+++|++++++|+++|+.|||+|+++++|.+++.+..|.+.
T Consensus 1092 ~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~ 1171 (1560)
T PTZ00243 1092 VTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVY 1171 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 99999998888888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH---hhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000504 1101 CVTFHNCGTMEWLCLRINLLFNFAFFLVLIILV---TLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVE 1177 (1458)
Q Consensus 1101 ~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sve 1177 (1458)
+..+.....++|+..+++++.+++.++++++.+ ....+..++|.++++++|+..+...+.++++.+.++|+.|.|+|
T Consensus 1172 ~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~e 1251 (1560)
T PTZ00243 1172 SCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVE 1251 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988776544433322 22344567899999999999999999999999999999999999
Q ss_pred HHHHHhc-CCCCCcccc-----------------------CCCCCC---CCCCCCccEEEEeeeEEeCCCCCcceeeeeE
Q 000504 1178 RILQFTN-IPSEAPLVI-----------------------KNSRPS---PEWPSSGKIELENLLVQYNPTLPMVLKGITC 1230 (1458)
Q Consensus 1178 Ri~~~~~-~~~E~~~~~-----------------------~~~~~~---~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~ 1230 (1458)
|+.+|.+ .|+|+.... +...++ +.||..|.|+|+||+|+|+++.|+||+||||
T Consensus 1252 Ri~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf 1331 (1560)
T PTZ00243 1252 RLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSF 1331 (1560)
T ss_pred HHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceE
Confidence 9999996 444421100 011122 2355779999999999999887889999999
Q ss_pred EeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCCCCC
Q 000504 1231 TFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHS 1310 (1458)
Q Consensus 1231 ~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~s 1310 (1458)
+|+||||||||||||||||||+++|+|+++|++|+|+|||+||+++++++||++|++|||||+||+||||+||||+++++
T Consensus 1332 ~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~s 1411 (1560)
T PTZ00243 1332 RIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEAS 1411 (1560)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccC-CCEEEEeCcCCCCCHHHHHHHHHHHHH
Q 000504 1311 DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKK-KRILVLDEATASIDTATDNVIQQTIRE 1389 (1458)
Q Consensus 1311 deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~-~~ILlLDEaTsslD~~Td~~Iq~~I~~ 1389 (1458)
|+|||+||++|+++++|.++|+||||.|+|+|.|||||||||||||||||++ |+|||||||||+||++||+.||++|++
T Consensus 1412 deeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~ 1491 (1560)
T PTZ00243 1412 SAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMS 1491 (1560)
T ss_pred HHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999996 899999999999999999999999999
Q ss_pred hcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHhh
Q 000504 1390 ETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRR 1447 (1458)
Q Consensus 1390 ~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~~~ 1447 (1458)
.+++||||+||||++|+.+||+|+||++|+|+|+|+|+||+++++|.|++|+++....
T Consensus 1492 ~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1549 (1560)
T PTZ00243 1492 AFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGRS 1549 (1560)
T ss_pred HCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 9999999999999999999999999999999999999999988889999999886543
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-141 Score=1336.92 Aligned_cols=1080 Identities=22% Similarity=0.272 Sum_probs=825.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCHHHHHHHHHhhHHHHHHHHH-----HHHHHHHHHHHHHHHHH
Q 000504 333 LTQRQWYFGANRIGIRVRSALTVLIYKRSMAIKFAGPSSGIIINMINVDVERIGDFFL-----YIHRIWLLPVQVFLALV 407 (1458)
Q Consensus 333 l~~~~~~~~~~r~g~~iR~~L~~~Iy~K~L~ls~~~~~~G~ivnlms~D~~ri~~~~~-----~~~~~w~~plqi~~al~ 407 (1458)
+...+|.+...|...|+|.....+|.|+-....... ++|++++-|+.|+++|.|++. ++|.+-.. +.++.
T Consensus 90 ~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~f----i~g~i 164 (1228)
T KOG0055|consen 90 IQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATF----IAGFV 164 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHH----HHHHH
Confidence 345678899999999999999999999877654443 449999999999999999864 33433322 22222
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHH
Q 000504 408 ILYKNLGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIE 487 (1458)
Q Consensus 408 lL~~~lG~~a~l~gl~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~E 487 (1458)
+-+ ..+|..+++.+.+..++......+++.+.+.-.+.+++--+--....|.+.+||+|-.++-|+...++-.+.
T Consensus 165 i~F-~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~---- 239 (1228)
T KOG0055|consen 165 IGF-YYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKA---- 239 (1228)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHH----
Confidence 222 227788898888888888888889998888888888887888899999999999999999999866665443
Q ss_pred HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 488 RDSLKKYLYTCSAIAFL------FWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKV 561 (1458)
Q Consensus 488 l~~l~k~~~~~a~~~~~------~~~~p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~v 561 (1458)
++..+|+...+++...+ +++-......++||..++..+..+++.+|+.+...-+-...|.+....++.+.+|++
T Consensus 240 L~~~~k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~ 319 (1228)
T KOG0055|consen 240 LENALKFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARA 319 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhcccc
Confidence 33333333333322211 112222344567787777778899999999987777777888888889999999999
Q ss_pred HHHHHHHHhcccCCCCC--CCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhH
Q 000504 562 SLYRIQEFIKEDNQKKP--ITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSS 638 (1458)
Q Consensus 562 S~~RI~~fL~~~e~~~~--~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKST 638 (1458)
+..+|.+-++...+.+. .+..........|+++|+.|+||.+ ++.+.|++ ||.|++|+.+|+|||+||||||
T Consensus 320 aa~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsR-----pdv~Il~g~sl~i~~G~~valVG~SGsGKST 394 (1228)
T KOG0055|consen 320 AAYRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSR-----PDVKILKGVSLKIPSGQTVALVGPSGSGKST 394 (1228)
T ss_pred chHHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCC-----CcchhhCCeEEEeCCCCEEEEECCCCCCHHH
Confidence 99999999987652222 1222233356789999999999987 56789999 9999999999999999999999
Q ss_pred HHHHHhCCccCCCCcEEEECC-------------EEEEEcCCCCCCCCcHHHHHhcCCCC-CHHHHHHHHHHhhhhhhHH
Q 000504 639 LLSSILGEIPRISGAAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIE 704 (1458)
Q Consensus 639 Ll~~llG~~~~~~G~~i~~~g-------------~~ayv~Q~~~i~~~Ti~enI~fg~~~-~~~~y~~vl~~c~l~~dl~ 704 (1458)
++++|.|.++|++|++ .++| ++|.|.|+|.+|++||+|||.||+|- ..++..++.+.....+.+.
T Consensus 395 ~i~LL~RfydP~~G~V-~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~ 473 (1228)
T KOG0055|consen 395 LIQLLARFYDPTSGEV-LIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFIL 473 (1228)
T ss_pred HHHHHHHhcCCCCceE-EEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHH
Confidence 9999999999999997 8887 47999999999999999999999964 4566666666666777899
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhc
Q 000504 705 MWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLD 784 (1458)
Q Consensus 705 ~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~ 784 (1458)
.+|+|.+|.+||+|..|||||||||||||||.+||+||||||||||||+++ +++.++.++...+|+|.|+|+|+++.++
T Consensus 474 ~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~s-e~~Vq~ALd~~~~grTTivVaHRLStIr 552 (1228)
T KOG0055|consen 474 KLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAES-ERVVQEALDKASKGRTTIVVAHRLSTIR 552 (1228)
T ss_pred hhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHH-HHHHHHHHHHhhcCCeEEEEeeehhhhh
Confidence 999999999999999999999999999999999999999999999999997 5666888999999999999999999999
Q ss_pred cCCEEEEEeCCeEEEcccchhhhhhcchHHHHHHHHhhhhccCCC-CCCCCccc----ccCccCccchhhhc---cc---
Q 000504 785 AADLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVN-PPQEDKCL----SRVPCQMSQITEER---FA--- 853 (1458)
Q Consensus 785 ~~D~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~---~~--- 853 (1458)
+||+|++|++|+|++.|+++||++ .++.+.++++.++......+ +.+++... +...........+. ..
T Consensus 553 naD~I~v~~~G~IvE~G~h~ELi~-~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~ 631 (1228)
T KOG0055|consen 553 NADKIAVMEEGKIVEQGTHDELIA-LGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLS 631 (1228)
T ss_pred ccCEEEEEECCEEEEecCHHHHHh-ccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCcccccccc
Confidence 999999999999999999999999 45888898887644332111 00000000 00000000000000 00
Q ss_pred -CCCCCCCCCCCCccchhhcCcchHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHhhhhhHHHh----hc-cccc--cc
Q 000504 854 -RPISCGEFSGRSQDEDTELGRVKWTVYSAFITLVYK-GALVPVILLCQVLFQALQMGSNYWIAW----AT-DEKR--KV 924 (1458)
Q Consensus 854 -~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~wl~~----~~-~~~~--~~ 924 (1458)
++..+...... .+++ -.++ ++.-++.... |+++.+-+++.++..+..-...+.+++ .. .+.. ..
T Consensus 632 ~~~~~e~~~~~~-~~~~---~~~s---~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~ 704 (1228)
T KOG0055|consen 632 VKPEGEDPEEPV-SEED---EKVS---FWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKR 704 (1228)
T ss_pred cccccccccccc-cccc---cccc---HHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHH
Confidence 00000000000 1111 1222 3333333322 223222233333322222222222221 11 1111 11
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccc--cChhhHHHHHhhhhhHHhhhhH
Q 000504 925 SREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDS--TPSSRILNRCSTDQSTVDTDIP 1002 (1458)
Q Consensus 925 ~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~--tp~G~ilnR~s~D~~~id~~l~ 1002 (1458)
....|..+|+++++++.++.++..+++.+.+.+..+++|.++++++++.++.|||. +. |++.+|+++|...+...+.
T Consensus 705 ~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~ 783 (1228)
T KOG0055|consen 705 EVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVG 783 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHH
Confidence 23348889999999999999999999999999999999999999999999999996 55 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhh
Q 000504 1003 YRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCF 1082 (1458)
Q Consensus 1003 ~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf 1082 (1458)
..+..+++++..++..+++.++++|.+.++++.+.++.+.....+.+......+..............|++++++||++|
T Consensus 784 ~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al 863 (1228)
T KOG0055|consen 784 DRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAAL 863 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999988776555555444333333333333334444445567789999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHH---HHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHH
Q 000504 1083 NQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAF---FLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVL 1158 (1458)
Q Consensus 1083 ~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~---~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~ 1158 (1458)
+.|++|++.+.+.++...+..+... .|-++...+-..+++ +++..+ ..+..++..++..+-..+.-...-...
T Consensus 864 ~~e~~~~~~y~~~l~~p~~~~~~~~---~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~ 940 (1228)
T KOG0055|consen 864 CAEEKFMELYKEELEKPRKSSFKRG---LISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMA 940 (1228)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHH
Confidence 9999999999998888776655432 233333222222222 222222 233445556665443332222222223
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCC-CCcceeeeeEEeeCCcE
Q 000504 1159 QAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKK 1237 (1458)
Q Consensus 1159 ~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Gek 1237 (1458)
.........+.-....|+.++.+..+-+++-+...+... ..-+.+|+|+|+||+|+|+.. ..+||+|+|++|++||.
T Consensus 941 ~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~--~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqT 1018 (1228)
T KOG0055|consen 941 LGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGG--KLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQT 1018 (1228)
T ss_pred HHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC--ccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCE
Confidence 344455566777888899999999886653221111110 111358999999999999632 13699999999999999
Q ss_pred EEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcC-CCCCHHHHHH
Q 000504 1238 IGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWE 1316 (1458)
Q Consensus 1238 vgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sdeeI~~ 1316 (1458)
+|+||||||||||++.+|.|+|+|.+|.|.|||.||++++++.||++|++|.|||+||++||||||... .+.+.+||.+
T Consensus 1019 vALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~ 1098 (1228)
T KOG0055|consen 1019 VALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIE 1098 (1228)
T ss_pred EEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 4579999999
Q ss_pred HHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEE
Q 000504 1317 VINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTV 1396 (1458)
Q Consensus 1317 aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TV 1396 (1458)
|++.++.++||.++|+||||.|||+|.+||||||||+|||||++||||||+||||||+||.++|+.+|++|++...++|+
T Consensus 1099 Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~ 1178 (1228)
T KOG0055|consen 1099 AAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTT 1178 (1228)
T ss_pred HHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHH
Q 000504 1397 ITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEF 1444 (1458)
Q Consensus 1397 I~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~ 1444 (1458)
|+||||++||++||.|.|+++|+|+|.|+|++|++ ++|.|++|++..
T Consensus 1179 IvIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q 1225 (1228)
T KOG0055|consen 1179 IVIAHRLSTIQNADVIAVLKNGKVVEQGTHDELLA-KRGIYFRLVQLQ 1225 (1228)
T ss_pred EEEecchhhhhcCCEEEEEECCEEEecccHHHHHh-CCCchHHHhhhc
Confidence 99999999999999999999999999999999997 789999999854
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.3e-130 Score=1328.55 Aligned_cols=1163 Identities=17% Similarity=0.170 Sum_probs=837.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 265 LPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANR 344 (1458)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r 344 (1458)
+++...+.+++.++++.++.++..++..+.|+++..+++.+...+. .....+. +++..++..++...+.+...+
T Consensus 50 ~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~--~~~~~~~----~~~~~i~~~~~~~~~~~~~~~ 123 (1466)
T PTZ00265 50 PFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN--VNDIIFS----LVLIGIFQFILSFISSFCMDV 123 (1466)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch--HHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 3344445567778888888888888888899999999986642221 1111111 222222222222223333444
Q ss_pred HHHHHHHHHHHHHHHHhccccc---CCCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000504 345 IGIRVRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFA 420 (1458)
Q Consensus 345 ~g~~iR~~L~~~Iy~K~L~ls~---~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~ 420 (1458)
++.++-..+...+|+|.++++. .....|++.|-++.|++.+.+++. .+..+...++.++.++++++. +.|..+++
T Consensus 124 ~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~-~sw~Lalv 202 (1466)
T PTZ00265 124 VTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLF-KNARLTLC 202 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHH
Confidence 4555555555555666665542 123779999999999999988764 355555566666666655553 45566777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 421 ALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSA 500 (1458)
Q Consensus 421 gl~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~ 500 (1458)
.++++.+++.+...+.+++++..++..+..++..+.+.|.++|||+||.|+-|+.+.++..+..+.-.+...+.....++
T Consensus 203 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~ 282 (1466)
T PTZ00265 203 ITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESL 282 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777788888888888888888899999999999999999999999999888876544444433333333333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000504 501 IAFLFWAS--PTLVSVITFGVCILLKT--------PLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFI 570 (1458)
Q Consensus 501 ~~~~~~~~--p~~v~~~tF~~~~~~~~--------~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL 570 (1458)
...+.... -..+.+++||.+.+..+ .++++.+++.+....+...++..+...+..+.++++|.+||.+.+
T Consensus 283 ~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii 362 (1466)
T PTZ00265 283 HIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEII 362 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222221 12234556777766643 588888887765554445555666667889999999999999999
Q ss_pred cccCCCCC-CCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCcc
Q 000504 571 KEDNQKKP-ITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP 648 (1458)
Q Consensus 571 ~~~e~~~~-~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~ 648 (1458)
+.++..+. ....... ....|+++|++|+|+.. +..+.|++ ||++++||+++|+||||||||||+++|+|.++
T Consensus 363 ~~~~~~~~~~~~~~~~-~~~~I~~~nVsf~Y~~~-----~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~ 436 (1466)
T PTZ00265 363 NRKPLVENNDDGKKLK-DIKKIQFKNVRFHYDTR-----KDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYD 436 (1466)
T ss_pred cCCCCCCCCCCCccCC-CCCcEEEEEEEEEcCCC-----CCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhcc
Confidence 87552111 1111111 11369999999999854 23578999 99999999999999999999999999999999
Q ss_pred CCCCcEEEEC-C-------------EEEEEcCCCCCCCCcHHHHHhcCCC------------------------------
Q 000504 649 RISGAAIKVH-G-------------KKAYVPQSSWIQTGTIRENILFGKD------------------------------ 684 (1458)
Q Consensus 649 ~~~G~~i~~~-g-------------~~ayv~Q~~~i~~~Ti~enI~fg~~------------------------------ 684 (1458)
|++|++ .++ | .++||+|+|.++++||+|||.+|..
T Consensus 437 p~~G~I-~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1466)
T PTZ00265 437 PTEGDI-IINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCR 515 (1466)
T ss_pred CCCCeE-EEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcccccccccccccccccccccc
Confidence 999997 773 3 3699999999999999999999742
Q ss_pred ----------------------------CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHc
Q 000504 685 ----------------------------MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVY 736 (1458)
Q Consensus 685 ----------------------------~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 736 (1458)
.++++..++++.+++.+.+..+|+|.+|.+|++|.+|||||||||+||||++
T Consensus 516 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll 595 (1466)
T PTZ00265 516 AKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAII 595 (1466)
T ss_pred ccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHh
Confidence 1234556667777888889999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhccCCEEEEEeCC-------------------
Q 000504 737 SNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDAADLVLVMKDG------------------- 795 (1458)
Q Consensus 737 ~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~D~i~~l~~G------------------- 795 (1458)
++|+|+|||||||+||+++...+.+ .+..+. +++|+|+|||+++.+..||+|++|++|
T Consensus 596 ~~P~ILlLDEpTSaLD~~se~~i~~-~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~ 674 (1466)
T PTZ00265 596 RNPKILILDEATSSLDNKSEYLVQK-TINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDN 674 (1466)
T ss_pred cCCCEEEEeCcccccCHHHHHHHHH-HHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccc
Confidence 9999999999999999999877765 555554 489999999999999889999999986
Q ss_pred ----------------------------eEEEcccchhhhhhcchHHHHHHHHhhhhccCCC-C-CCCCc----cc-c-c
Q 000504 796 ----------------------------KIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVN-P-PQEDK----CL-S-R 839 (1458)
Q Consensus 796 ----------------------------~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~----~~-~-~ 839 (1458)
+|+++|+++|+++..++.+..++..+........ . .+... .. . .
T Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (1466)
T PTZ00265 675 KENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDS 754 (1466)
T ss_pred cccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccccccccccccc
Confidence 5999999999997456777777765432211100 0 00000 00 0 0
Q ss_pred Ccc---Cc-cch--hhhcc-c--CCCCC--CCCCCCCcc-c-----h----hhcCcchHHHHHHHHHHhhhhHHHHHHHH
Q 000504 840 VPC---QM-SQI--TEERF-A--RPISC--GEFSGRSQD-E-----D----TELGRVKWTVYSAFITLVYKGALVPVILL 898 (1458)
Q Consensus 840 ~~~---~~-~~~--~~~~~-~--~~~~~--~~~~~~~~~-e-----~----~~~g~v~~~~y~~y~~~~~~~~~~~~~~~ 898 (1458)
.+. .. ... .+... . ..... ....+...+ + + .......+..++.++.......+ +.++
T Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 832 (1466)
T PTZ00265 755 ERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVT--IIAL 832 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHH--HHHH
Confidence 000 00 000 00000 0 00000 000000000 0 0 00001112223334333222211 1222
Q ss_pred HHHHHHHHHhhhhhHHHhhccc-----ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000504 899 CQVLFQALQMGSNYWIAWATDE-----KRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRA 973 (1458)
Q Consensus 899 ~~~~~~~~~~~~~~wl~~~~~~-----~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~a 973 (1458)
+.++..++....++.++.+.+. ........+..++++++++..++.+++.++....+.+...+++..+++++++.
T Consensus 833 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~ 912 (1466)
T PTZ00265 833 SILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQ 912 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2223333333333333333211 00111234556677777778888899999999999999999999999999999
Q ss_pred ccccccc--cChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH--
Q 000504 974 PISFFDS--TPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYIT-- 1049 (1458)
Q Consensus 974 p~~ffd~--tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~-- 1049 (1458)
|++|||+ +++|++++|+++|++.+...+...+..++..++.+++.++++++.+|.++++++|+.++.........+
T Consensus 913 ~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 992 (1466)
T PTZ00265 913 EISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARLT 992 (1466)
T ss_pred CHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999996 889999999999999999999988888999999999999999999998887766654433222111111
Q ss_pred HHHHHHHH-------------HhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHH
Q 000504 1050 TARELARM-------------VGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLR 1116 (1458)
Q Consensus 1050 ~sr~l~rl-------------~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~ 1116 (1458)
..++.++. +.+..+.....+.|+++|+.|||+|+.|+++.+++.+..+...+..........++...
T Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1466)
T PTZ00265 993 ANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGF 1072 (1466)
T ss_pred HHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11121111 12234566889999999999999999999999999998888776665554444444444
Q ss_pred HHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCC
Q 000504 1117 INLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKN 1195 (1458)
Q Consensus 1117 l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~ 1195 (1458)
.+.+..+..+++.++ ...+..+.++.|.+..++.+.+........+...+.+++....+.+|+.++++.+++.+.....
T Consensus 1073 ~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~ 1152 (1466)
T PTZ00265 1073 SQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNG 1152 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCc
Confidence 444433333322222 3334467777776555444443333345556777888999999999999999876543211111
Q ss_pred CCC-CCCCCCCccEEEEeeeEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC------------
Q 000504 1196 SRP-SPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP------------ 1261 (1458)
Q Consensus 1196 ~~~-~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p------------ 1261 (1458)
..+ +...+..|.|+|+||+|+|+.+ ..+||+|+||+|+|||++||||+||||||||+++|.|+|+|
T Consensus 1153 ~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~ 1232 (1466)
T PTZ00265 1153 GIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEH 1232 (1466)
T ss_pred ccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccc
Confidence 110 0112346889999999999742 23699999999999999999999999999999999999999
Q ss_pred ------------------------------------------CCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccH
Q 000504 1262 ------------------------------------------SGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTV 1299 (1458)
Q Consensus 1262 ------------------------------------------~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTI 1299 (1458)
++|+|+|||+||+++++++||++|+||||||+||+|||
T Consensus 1233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTI 1312 (1466)
T PTZ00265 1233 TNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSI 1312 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccH
Confidence 69999999999999999999999999999999999999
Q ss_pred HHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHH
Q 000504 1300 RTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTA 1378 (1458)
Q Consensus 1300 R~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~ 1378 (1458)
||||..+ ++++|+||++|++.+++++||.++|+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||++
T Consensus 1313 reNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~ 1392 (1466)
T PTZ00265 1313 YENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSN 1392 (1466)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHH
Confidence 9999887 468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeC----CEE-EEecChhHHhhcCCChHHHHHHHH
Q 000504 1379 TDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDE----GKV-LEYDSPRQLLEDNSSSFSKLVAEF 1444 (1458)
Q Consensus 1379 Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~~DrVlvL~~----G~i-vE~g~p~~Ll~~~~s~F~~l~~~~ 1444 (1458)
|++.|+++|++.. +++|+|+||||++++.+||+|+||++ |++ +|.|+|+||+++++|.|++|++..
T Consensus 1393 sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1393 SEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred HHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 9999999999873 68999999999999999999999999 995 599999999976689999998753
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-88 Score=816.38 Aligned_cols=567 Identities=23% Similarity=0.335 Sum_probs=486.7
Q ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcc-----cccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 000504 876 KWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATD-----EKRKVSREQLIGVFIFLSGGSSFFILGRAVL 950 (1458)
Q Consensus 876 ~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~-----~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~ 950 (1458)
.++..+.|.+..+++... ..++.++.....+..++++...++ ++..........+..++.++++++.++|.++
T Consensus 134 ~~~rl~~l~~~~~~~l~~--a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~ 211 (716)
T KOG0058|consen 134 LLKRLLGLLKPEWKWLVA--AFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGL 211 (716)
T ss_pred HHHHHHHHhchhHHHHHH--HHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566666655433322 222333444445666665543322 1111122334556667778888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000504 951 LATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVF 1030 (1458)
Q Consensus 951 ~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~ 1030 (1458)
+.+.+.+...+++..+|++++++.++|||.+.+|++++|+++|...+...++..+...+.+.++.++.++.|+..+|.+.
T Consensus 212 ~~~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Lt 291 (716)
T KOG0058|consen 212 LQYAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLT 291 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHh
Q 000504 1031 PLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTM 1110 (1458)
Q Consensus 1031 ~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~ 1110 (1458)
++.+..+++...+.++|.+..|++.+...++-+...+...|.+++++|+|+|+.|++..++|.+.++...+.........
T Consensus 292 lv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~ 371 (716)
T KOG0058|consen 292 LVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAY 371 (716)
T ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99888888888889999999999999999999999999999999999999999999999999888887766654444343
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCC
Q 000504 1111 EWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEA 1189 (1458)
Q Consensus 1111 ~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~ 1189 (1458)
-.+....++.+++....++++ ..+...+.+++|..--.+.|...+...+.++...+.++.+.+.|.+|+.||++.++.-
T Consensus 372 ~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i 451 (716)
T KOG0058|consen 372 GIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRI 451 (716)
T ss_pred hHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCC
Confidence 334444455555444443333 3445677889999999999999999999999999999999999999999999876554
Q ss_pred ccccCCCCCCCCCCCCccEEEEeeeEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEE
Q 000504 1190 PLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILI 1268 (1458)
Q Consensus 1190 ~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~I 1268 (1458)
+.. ....|. .-+|.|+|+||+|.|+.. ..+||||+||+|+|||.||+||||||||||++++|.|+|+|++|+|++
T Consensus 452 ~~~---G~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Ill 527 (716)
T KOG0058|consen 452 PLT---GTLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILL 527 (716)
T ss_pred CCC---Cccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 322 111222 468999999999999643 236999999999999999999999999999999999999999999999
Q ss_pred cCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCCh
Q 000504 1269 DGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSV 1347 (1458)
Q Consensus 1269 DG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1347 (1458)
||+||++++.+.||++||+|.|||+||+|||||||... ...+||||.+|+++++.++||.++|+|+||.|||+|..|||
T Consensus 528 DG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSG 607 (716)
T KOG0058|consen 528 DGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSG 607 (716)
T ss_pred CCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccc
Confidence 99999999999999999999999999999999999764 46899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChh
Q 000504 1348 GQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPR 1427 (1458)
Q Consensus 1348 GQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~ 1427 (1458)
||||||||||||+|||+|||||||||+||.++|..+|++|.+..+++|||+||||++||+.+|+|+|+++|+|+|.|+|+
T Consensus 608 GQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~ 687 (716)
T KOG0058|consen 608 GQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHD 687 (716)
T ss_pred hHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCChHHHHHHHHHhhc
Q 000504 1428 QLLEDNSSSFSKLVAEFLRRT 1448 (1458)
Q Consensus 1428 ~Ll~~~~s~F~~l~~~~~~~~ 1448 (1458)
||+++++|.|++|+++.....
T Consensus 688 eLl~~~~gly~~Lv~~q~~~~ 708 (716)
T KOG0058|consen 688 ELLSKPNGLYAKLVQRQLDSG 708 (716)
T ss_pred HHhhCcccHHHHHHHHhcccC
Confidence 999999999999999876443
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.9e-81 Score=788.91 Aligned_cols=547 Identities=26% Similarity=0.372 Sum_probs=488.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhhcccc-cccc--cch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 893 VPVILLCQVLFQALQMGSNYWIAWATDEK-RKVS--REQ-LIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMIT 968 (1458)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~~-~~~~--~~~-~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~ 968 (1458)
+.-+++..++.+++.+++++...+..|.- +..+ ... ....+++.++...++.++|++++...+.+....+-.++++
T Consensus 156 l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~ 235 (709)
T COG2274 156 LFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFR 235 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 33455566777888888888888777532 2222 222 2233445566677889999999999999999999999999
Q ss_pred HHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000504 969 SVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYI 1048 (1458)
Q Consensus 969 ~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~ 1048 (1458)
++++.|++||++.++|++++|++ |++.|...+...+...+..++.++..+++|++++|+++++.+..++++..+..+..
T Consensus 236 hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~ 314 (709)
T COG2274 236 HLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQ 314 (709)
T ss_pred HHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999985 88888889999999999999999999999999999999998888888887777777
Q ss_pred HHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 000504 1049 TTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLV 1128 (1458)
Q Consensus 1049 ~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~ 1128 (1458)
+..|+..+...+..+...++..|++.|+.|||+.+.|.++..++.+..+++.+..+.......|......++..+..+.+
T Consensus 315 ~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~i 394 (709)
T COG2274 315 PLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLI 394 (709)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888899999999999999999999999999999999999999999998888888888888887766666
Q ss_pred HHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCcc
Q 000504 1129 LII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGK 1207 (1458)
Q Consensus 1129 ~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~ 1207 (1458)
+++ ......+.++.|..-...+..-.++..+..++..+.+++....+.+|+.+..+.|+|.+. +..+...|+..|+
T Consensus 395 L~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~---~~~~~~~~~~~g~ 471 (709)
T COG2274 395 LWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEG---DKTLIHLPKLQGE 471 (709)
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc---ccccccccccCce
Confidence 555 334456777887777777777788899999999999999999999999999999988642 2224455677899
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+|+||+|+|+++.|++|+|+|++|+|||+|||||+||||||||+++|.|+|+|++|+|++||+|+++++++++|++|++
T Consensus 472 I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~ 551 (709)
T COG2274 472 IEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGY 551 (709)
T ss_pred EEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeE
Confidence 99999999999998899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCCccccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEE
Q 000504 1288 IPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRIL 1366 (1458)
Q Consensus 1288 IpQdp~LF~gTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1366 (1458)
||||++||+||||||+...+ +.+|||+++|++.+|++++|.++|.||||+|+|+|.|||||||||++||||+++||+||
T Consensus 552 V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~IL 631 (709)
T COG2274 552 VLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKIL 631 (709)
T ss_pred EcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEE
Confidence 99999999999999998764 57889999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHH
Q 000504 1367 VLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEF 1444 (1458)
Q Consensus 1367 lLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~ 1444 (1458)
+||||||+||++||+.|.+.|.+...+||+|+||||++++++||||+|||+|+|+|+|+|+||++. +|.|+++++.+
T Consensus 632 lLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~~q 708 (709)
T COG2274 632 LLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred EEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999986 89999998753
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.6e-78 Score=765.74 Aligned_cols=543 Identities=27% Similarity=0.380 Sum_probs=456.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHhhccccc--ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000504 896 ILLCQVLFQALQMGSNYWIAWATDEKR--KVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRA 973 (1458)
Q Consensus 896 ~~~~~~~~~~~~~~~~~wl~~~~~~~~--~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~a 973 (1458)
.+++.++...+....++++.+..+.-. ......+...++++.++..++.++..+...+.+.+....++.++++++++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 98 (567)
T COG1132 19 AILLLLLSALLSLLLPLLIGRIIDALLADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLRL 98 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 334445556666667777665543221 111223344455555566667777777778888999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 974 PISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARE 1053 (1458)
Q Consensus 974 p~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~ 1053 (1458)
|+++|+++++|++++|+++|++.++..+......+..+++.+++.+++++..+|.+.++++...+++.....++.+..++
T Consensus 99 ~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
T COG1132 99 PLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSRK 178 (567)
T ss_pred CHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988886666667888889999999999998888777777777777777766788
Q ss_pred HHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH-H
Q 000504 1054 LARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-L 1132 (1458)
Q Consensus 1054 l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~ 1132 (1458)
..+......+.+.+.+.|+++|..+||+|+.++...+++.+..+...+...........+.....++..+....+..+ .
T Consensus 179 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (567)
T COG1132 179 LSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALGG 258 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888899999999999999999999999999887777777766666554444444444333344333333322222 2
Q ss_pred HhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEe
Q 000504 1133 VTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELEN 1212 (1458)
Q Consensus 1133 ~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~n 1212 (1458)
.....+.++.|.....+.|...+...+..+......++....+.||+.++.+.+++... ... +..+..|.|+|+|
T Consensus 259 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~---~~~--~~~~~~~~I~f~~ 333 (567)
T COG1132 259 FLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVED---PPD--PLKDTIGSIEFEN 333 (567)
T ss_pred HHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---CCC--CCCCCCCeEEEEE
Confidence 22345567888888889999999999999999999999999999999999987554211 111 1345568899999
Q ss_pred eeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCC
Q 000504 1213 LLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDP 1292 (1458)
Q Consensus 1213 vs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp 1292 (1458)
|+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.|||+||+++++.+||++|++|||||
T Consensus 334 vsf~y~~~-~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~ 412 (567)
T COG1132 334 VSFSYPGK-KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQDP 412 (567)
T ss_pred EEEEcCCC-CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcccc
Confidence 99999863 46999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccHHHhcCcCCC-CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCc
Q 000504 1293 MLFQGTVRTNLDPLEQ-HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEA 1371 (1458)
Q Consensus 1293 ~LF~gTIR~NLdp~~~-~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEa 1371 (1458)
+||+||||+||+++.+ ++|||+++|+++++++|+|.++|+||||.|||+|.+||||||||+|||||++|+|+|||||||
T Consensus 413 ~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILDEa 492 (567)
T COG1132 413 LLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDEA 492 (567)
T ss_pred eeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 9999999999999865 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHH
Q 000504 1372 TASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1372 TsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~ 1445 (1458)
||++|++||+.|++.+++..+++|+|+||||++|+.+||+|+|||+|+|+|+|+|+||+++ +|.|++|+++..
T Consensus 493 TSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~~ 565 (567)
T COG1132 493 TSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQG 565 (567)
T ss_pred ccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHhh
Confidence 9999999999999999988888999999999999999999999999999999999999986 899999998764
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.8e-76 Score=755.33 Aligned_cols=560 Identities=18% Similarity=0.221 Sum_probs=449.2
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccc--cccc---cchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 878 TVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK--RKVS---REQLIGVFIFLSGGSSFFILGRAVLLA 952 (1458)
Q Consensus 878 ~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~--~~~~---~~~~l~vy~~l~~~~~~~~~~~~~~~~ 952 (1458)
+.++.|++..++.. .+.+++.++..++.+..++.+.+..+.- +..+ ...++..++++.++..++.+++.++..
T Consensus 11 ~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK11174 11 RWLKQQSKPAKRWL--NLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGF 88 (588)
T ss_pred HHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33556666543332 2334444555666666666666555321 1111 112233344445556667778888888
Q ss_pred HHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000504 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1458)
Q Consensus 953 ~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v 1032 (1458)
..+.+...+++.++++++++.|+++|++.++|++++|+++|++.++..+...+..++..++.+++.+++++.++|.+.++
T Consensus 89 ~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 168 (588)
T PRK11174 89 KAGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLI 168 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888888888888888888999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHH
Q 000504 1033 FLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEW 1112 (1458)
Q Consensus 1033 ~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1112 (1458)
++..+++.+++..++.+..++..+......+.+.+++.|+++|+.+||+|++|+++.+++.+..++..+..........+
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (588)
T PRK11174 169 LLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFL 248 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666666666677777777777777788899999999999999999999999999999988888877766555444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHh
Q 000504 1113 LCLRINLLFNFAFFLVLIILVTLPRSAIDPSLA---------GLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFT 1183 (1458)
Q Consensus 1113 l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~ 1183 (1458)
......++..+...++.++......+.++.|.. -.++.+...+...+..+...+.++.....+.+|+.++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 328 (588)
T PRK11174 249 SSAVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFL 328 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444332222211111111233333321 12223444556667777778888899999999999999
Q ss_pred cCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCC
Q 000504 1184 NIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSG 1263 (1458)
Q Consensus 1184 ~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~ 1263 (1458)
+.|++.+.. ...+ ...+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||+++|+|++ |++
T Consensus 329 ~~~~~~~~~--~~~~-~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~ 403 (588)
T PRK11174 329 ETPLAHPQQ--GEKE-LASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQ 403 (588)
T ss_pred cCCCcccCC--Cccc-cCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCC
Confidence 876543211 1111 111234679999999887654 56999999999999999999999999999999999999 999
Q ss_pred cEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCC
Q 000504 1264 GRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDG 1342 (1458)
Q Consensus 1264 G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1342 (1458)
|+|.+||+|+++++.+++|++|+||||||+||+|||||||..+ ++++|||+++|+++|++++++.++|+|+||.|||+|
T Consensus 404 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 404 GSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred cEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 9999999999999999999999999999999999999999887 469999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEE
Q 000504 1343 ENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLE 1422 (1458)
Q Consensus 1343 ~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE 1422 (1458)
.|||||||||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||++|+++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e 563 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQ 563 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEee
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred ecChhHHhhcCCChHHHHHHHHH
Q 000504 1423 YDSPRQLLEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1423 ~g~p~~Ll~~~~s~F~~l~~~~~ 1445 (1458)
.|+|+||+++ ++.|+++++.+.
T Consensus 564 ~G~~~eL~~~-~~~y~~l~~~q~ 585 (588)
T PRK11174 564 QGDYAELSQA-GGLFATLLAHRQ 585 (588)
T ss_pred cCCHHHHHhc-chHHHHHHHHhh
Confidence 9999999974 689999987654
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.2e-76 Score=765.18 Aligned_cols=552 Identities=22% Similarity=0.303 Sum_probs=459.5
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhccccc-ccc---cchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 879 VYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKR-KVS---REQLIGVFIFLSGGSSFFILGRAVLLATI 954 (1458)
Q Consensus 879 ~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~---~~~~l~vy~~l~~~~~~~~~~~~~~~~~~ 954 (1458)
.++.|++..+. .+...+++.++...+.+..+++.....+.-. ..+ ....+..++++.++..++.+++..++...
T Consensus 151 ~l~~~~~~~~~--~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 228 (711)
T TIGR00958 151 RLLGLSGRDWP--WLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYT 228 (711)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455554322 2334444556666777777777765554211 111 11234445555666777888888999999
Q ss_pred HHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000504 955 AIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFL 1034 (1458)
Q Consensus 955 ~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~ 1034 (1458)
+.+...+++.++++++++.|++||+++++|+++||+++|++.++..+...+..++..++.+++.+++++..+|.+.++++
T Consensus 229 ~~~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l 308 (711)
T TIGR00958 229 MARINLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTL 308 (711)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHh---H
Q 000504 1035 VILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTM---E 1111 (1458)
Q Consensus 1035 p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~---~ 1111 (1458)
..+++.+++.+++.+..+++.+...+..+...+++.|+++|+.+||+|+.|+++.+++.+..++..+......... .
T Consensus 309 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (711)
T TIGR00958 309 INLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYL 388 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777788887788877778888889999999999999999999999999999888887766554433222 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCcc
Q 000504 1112 WLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPL 1191 (1458)
Q Consensus 1112 wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1191 (1458)
|....+..+..+++.. +.......+.+++|.+...+.|...+...+..+...+.++.+...+.+|+.++.+.+++.+.
T Consensus 389 ~~~~~~~~~~~~~il~--~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 466 (711)
T TIGR00958 389 WTTSVLGMLIQVLVLY--YGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPL 466 (711)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3332222222222111 11223446788999888888999999999999999999999999999999999987655321
Q ss_pred ccCCCCCCCCCCCCccEEEEeeeEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcC
Q 000504 1192 VIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDG 1270 (1458)
Q Consensus 1192 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG 1270 (1458)
. .....++..|.|+|+||+|+|+.+ .+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||
T Consensus 467 ~----~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg 542 (711)
T TIGR00958 467 T----GTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDG 542 (711)
T ss_pred C----CCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECC
Confidence 1 111123456889999999999753 35799999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000504 1271 VDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1271 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
+|+++++.+++|++|+||||||.+|+|||||||... ++.+||++++++++++++++++++|+|+||.+||+|.+|||||
T Consensus 543 ~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQ 622 (711)
T TIGR00958 543 VPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQ 622 (711)
T ss_pred EEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHH
Confidence 999999999999999999999999999999999865 4688999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHH
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
|||++||||++++|+|||||||||+||++|++.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+||
T Consensus 623 kQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL 700 (711)
T TIGR00958 623 KQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQL 700 (711)
T ss_pred HHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHH
Confidence 999999999999999999999999999999999999 334578999999999999999999999999999999999999
Q ss_pred hhcCCChHHHHH
Q 000504 1430 LEDNSSSFSKLV 1441 (1458)
Q Consensus 1430 l~~~~s~F~~l~ 1441 (1458)
+++ ++.|++|+
T Consensus 701 ~~~-~~~y~~lv 711 (711)
T TIGR00958 701 MED-QGCYKHLV 711 (711)
T ss_pred HhC-CCchHhcC
Confidence 975 67898874
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2e-75 Score=756.86 Aligned_cols=540 Identities=21% Similarity=0.260 Sum_probs=456.7
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhhcccc-ccccc---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 895 VILLCQVLFQALQMGSNYWIAWATDEK-RKVSR---EQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSV 970 (1458)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~wl~~~~~~~-~~~~~---~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~v 970 (1458)
.++++.++...+.+..++.+....+.- +..+. ..+...++++.++..++.+++.++....+.+...+++.++++++
T Consensus 140 ~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 219 (686)
T TIGR03797 140 AILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRL 219 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566666677777666555321 11111 12234455555666778888999999999999999999999999
Q ss_pred ccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 971 FRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITT 1050 (1458)
Q Consensus 971 l~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~ 1050 (1458)
++.|++||++.++|++++|++ |++.+...+...+...+..++..++.+++++.++|++.++++.++++++.+..++.+.
T Consensus 220 l~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~ 298 (686)
T TIGR03797 220 LRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLL 298 (686)
T ss_pred HcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999997 7888988888777777777777778888889999998887776666666666566666
Q ss_pred HHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH
Q 000504 1051 ARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLI 1130 (1458)
Q Consensus 1051 sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~ 1130 (1458)
.+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+..+.......|......++..+...++.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 378 (686)
T TIGR03797 299 QVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFA 378 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666667778899999999999999999999999999999999988888887777777776666655444333333
Q ss_pred H-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEE
Q 000504 1131 I-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIE 1209 (1458)
Q Consensus 1131 ~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~ 1209 (1458)
+ ......+.++.|.+-.+..+...+...+..+...+.++.....+.+|+.++.+.|+|.+. ...+ ..+..|.|+
T Consensus 379 ~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~---~~~~--~~~~~~~I~ 453 (686)
T TIGR03797 379 AAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDE---AKTD--PGKLSGAIE 453 (686)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc---CcCC--CCCCCceEE
Confidence 2 233346778888777777788888888888999999999999999999999987766431 1111 113457899
Q ss_pred EEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEc
Q 000504 1210 LENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIP 1289 (1458)
Q Consensus 1210 ~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIp 1289 (1458)
|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|++||+|+++++.+++|+++++||
T Consensus 454 ~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~ 533 (686)
T TIGR03797 454 VDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVL 533 (686)
T ss_pred EEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEc
Confidence 99999999866678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000504 1290 QDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLD 1369 (1458)
Q Consensus 1290 Qdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLD 1369 (1458)
|||.+|+|||||||..++.++|+++++|++.+++++++.++|+|+||.++|+|.|||||||||++||||++++|+||+||
T Consensus 534 Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLD 613 (686)
T TIGR03797 534 QNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFD 613 (686)
T ss_pred cCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999987668999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHH
Q 000504 1370 EATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAE 1443 (1458)
Q Consensus 1370 EaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~ 1443 (1458)
||||+||++|++.|++.|++. ++|+|+||||++++..||+|+||++|+++|.|+|++|++ +++.|++|+++
T Consensus 614 EpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~-~~~~y~~l~~~ 684 (686)
T TIGR03797 614 EATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMA-REGLFAQLARR 684 (686)
T ss_pred CCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHh-CCcHHHHHHHh
Confidence 999999999999999999986 689999999999999999999999999999999999997 57899999874
No 15
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.8e-75 Score=740.34 Aligned_cols=544 Identities=24% Similarity=0.357 Sum_probs=449.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHhhcccc-cccc--cchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 896 ILLCQVLFQALQMGSNYWIAWATDEK-RKVS--REQL---IGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITS 969 (1458)
Q Consensus 896 ~~~~~~~~~~~~~~~~~wl~~~~~~~-~~~~--~~~~---l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ 969 (1458)
.+++.++...+....++++.+..+.. +..+ .... +.+++++.++..++.+++.+.....+.+...+++.+++++
T Consensus 28 ~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 107 (592)
T PRK10790 28 AVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDA 107 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566666777777777665421 1111 1111 1223333445566677788888899999999999999999
Q ss_pred HccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000504 970 VFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYIT 1049 (1458)
Q Consensus 970 vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~ 1049 (1458)
++++|+++|+..+.|++++|+++|++.++..+...+..++..++.+++.+++++..+|++.++++..+++.+.+...+.+
T Consensus 108 l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~ 187 (592)
T PRK10790 108 ALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQR 187 (592)
T ss_pred HHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988888888888888889999998876655444444444455555
Q ss_pred HHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHH-HHHHHHHHHHHHHHH
Q 000504 1050 TARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWL-CLRINLLFNFAFFLV 1128 (1458)
Q Consensus 1050 ~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl-~~~l~~l~~~~~~~~ 1128 (1458)
..+...+......+...+++.|+++|+.+||+|+.++++.+++.+..++..+..+.......+. .....++..+...++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (592)
T PRK10790 188 YSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGL 267 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666666677888999999999999999999999999988887776666555444333332 222333333222222
Q ss_pred HHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccE
Q 000504 1129 LIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKI 1208 (1458)
Q Consensus 1129 ~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I 1208 (1458)
.++......+.++.|.......|...+...+..+...+.++++...+.+|+.++.+.+++++. .. ..++..+.|
T Consensus 268 ~~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~---~~---~~~~~~~~i 341 (592)
T PRK10790 268 LMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG---ND---DRPLQSGRI 341 (592)
T ss_pred HHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC---CC---ccCCCCCeE
Confidence 122112346778888888888888889999999999999999999999999999886654321 11 122345789
Q ss_pred EEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEE
Q 000504 1209 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSII 1288 (1458)
Q Consensus 1209 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iI 1288 (1458)
+|+||+|+|+++ +++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.+++|++|+||
T Consensus 342 ~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v 420 (592)
T PRK10790 342 DIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMV 420 (592)
T ss_pred EEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999754 5699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000504 1289 PQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVL 1368 (1458)
Q Consensus 1289 pQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlL 1368 (1458)
||||.+|+||||+||.++++++|++++++++++|++++++++|+||||.++|+|.+||||||||++||||++++|+||+|
T Consensus 421 ~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illl 500 (592)
T PRK10790 421 QQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILIL 500 (592)
T ss_pred ccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 99999999999999999888999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHhh
Q 000504 1369 DEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRR 1447 (1458)
Q Consensus 1369 DEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~~~ 1447 (1458)
|||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|+||+++ ++.|++|++.....
T Consensus 501 DEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~-~~~y~~l~~~~~~~ 578 (592)
T PRK10790 501 DEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA-QGRYWQMYQLQLAG 578 (592)
T ss_pred eCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC-CCHHHHHHHHHhhh
Confidence 9999999999999999999998889999999999999999999999999999999999999975 68999999876543
No 16
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.1e-75 Score=757.33 Aligned_cols=559 Identities=21% Similarity=0.264 Sum_probs=467.3
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccc-ccccc---chhHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 877 WTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK-RKVSR---EQLIGVFIFLSGGSSFFILGRAVLLA 952 (1458)
Q Consensus 877 ~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~-~~~~~---~~~l~vy~~l~~~~~~~~~~~~~~~~ 952 (1458)
++.++.+++..++. +..++++.++..++.++.++++....+.. +.... ..+...++++.++..++.+++.++..
T Consensus 142 ~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (710)
T TIGR03796 142 LRALWRRLRGSRGA--LLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLR 219 (710)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666644322 22334444555666666677766555321 11111 12233444455566778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000504 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1458)
Q Consensus 953 ~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v 1032 (1458)
..+.+...+++.++++++++.|++||++.++|++++|++.| ..+...+...+..++..++.+++.+++++.++|+++++
T Consensus 220 ~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 298 (710)
T TIGR03796 220 RLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLI 298 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 56887888888888888888888999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHH
Q 000504 1033 FLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEW 1112 (1458)
Q Consensus 1033 ~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1112 (1458)
.+.++++++++..++.+..++..+......+...+++.|+++|+.+||+++.|+.+.+++.+..++..+..........|
T Consensus 299 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (710)
T TIGR03796 299 GIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQI 378 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777777777777777777777778888999999999999999999999999999988888887777766666666
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCcc
Q 000504 1113 LCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPL 1191 (1458)
Q Consensus 1113 l~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1191 (1458)
......++..+...++.++ ......+.++.|.+..+..+...+...+..+...+.++.....+.+|+.++.+.|+|.+.
T Consensus 379 ~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 458 (710)
T TIGR03796 379 LGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLL 458 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 6666665555443333332 233456788888888888888888888889999999999999999999999988776532
Q ss_pred ccCC--C-CCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEE
Q 000504 1192 VIKN--S-RPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILI 1268 (1458)
Q Consensus 1192 ~~~~--~-~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~I 1268 (1458)
.... . ...+.++..|.|+++||+|+|+++.+++|+|+||+|+|||+|||||+||||||||+++|+|+++|++|+|.+
T Consensus 459 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~i 538 (710)
T TIGR03796 459 EEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILF 538 (710)
T ss_pred ccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 1100 0 011113456889999999999876677999999999999999999999999999999999999999999999
Q ss_pred cCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCCh
Q 000504 1269 DGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSV 1347 (1458)
Q Consensus 1269 DG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1347 (1458)
||+|+++++.+++|++++||||||.+|+|||||||..++ +++|++++++++++++++++.++|+|+||.++|+|.||||
T Consensus 539 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSG 618 (710)
T TIGR03796 539 DGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSG 618 (710)
T ss_pred CCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCH
Confidence 999999999999999999999999999999999998764 6899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChh
Q 000504 1348 GQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPR 1427 (1458)
Q Consensus 1348 GQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~ 1427 (1458)
|||||++||||++++|+||+||||||+||++|++.|.+.|++ .++|+|+||||++++.+||||+||++|+++|.|+|+
T Consensus 619 GQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~ 696 (710)
T TIGR03796 619 GQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHE 696 (710)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHH
Confidence 999999999999999999999999999999999999999987 589999999999999999999999999999999999
Q ss_pred HHhhcCCChHHHHH
Q 000504 1428 QLLEDNSSSFSKLV 1441 (1458)
Q Consensus 1428 ~Ll~~~~s~F~~l~ 1441 (1458)
||++ +++.|++|+
T Consensus 697 ~Ll~-~~~~y~~l~ 709 (710)
T TIGR03796 697 ELWA-VGGAYARLI 709 (710)
T ss_pred HHHH-cCCcHHHHh
Confidence 9997 478899886
No 17
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.7e-75 Score=755.95 Aligned_cols=558 Identities=21% Similarity=0.275 Sum_probs=460.4
Q ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccc-ccccc---chhHHHHHHHHHHHHHHHHHHHHHH
Q 000504 876 KWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK-RKVSR---EQLIGVFIFLSGGSSFFILGRAVLL 951 (1458)
Q Consensus 876 ~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~-~~~~~---~~~l~vy~~l~~~~~~~~~~~~~~~ 951 (1458)
++..++.|++...+. +..++++.++..++.++.++++....+.. +.... ..+...++++.++..++.+++.++.
T Consensus 143 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 143 SLLKFIPLITRQKKL--IVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred hHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566666654332 23344455666677777788887666421 11111 1122233344455567778888999
Q ss_pred HHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000504 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1458)
Q Consensus 952 ~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~ 1031 (1458)
...+.+...+++.++++++++.|++||++.++|++++|++ |...+...+...+...+..++.+++.+++++..+|++++
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 299 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFL 299 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999999999999999999998 888887777766666677777777777888889999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 000504 1032 LFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTME 1111 (1458)
Q Consensus 1032 v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1111 (1458)
+++..+++++.+...+.+..++..+......+...+++.|+++|+.+||+||.|+++.+++.+..++..+..+.......
T Consensus 300 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (708)
T TIGR01193 300 LSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQ 379 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777777777777777888888888889999999999999999999999999999988888877776665544444
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCc
Q 000504 1112 WLCLRINLLFNFAFFLVL-IILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAP 1190 (1458)
Q Consensus 1112 wl~~~l~~l~~~~~~~~~-~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~ 1190 (1458)
+......++..+...++. +.......+.++.|.+..+..+...+...+..+...+.++.....+++|+.++.+.|+|.+
T Consensus 380 ~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 459 (708)
T TIGR01193 380 GQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFI 459 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 443333333322222222 1223334778888888888888888888888999999999999999999999998877653
Q ss_pred cccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcC
Q 000504 1191 LVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDG 1270 (1458)
Q Consensus 1191 ~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG 1270 (1458)
.. ....+.++..|.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|++||
T Consensus 460 ~~---~~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg 535 (708)
T TIGR01193 460 NK---KKRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNG 535 (708)
T ss_pred cc---ccccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECC
Confidence 21 1111233457889999999999744 5699999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcC--CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000504 1271 VDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL--EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1348 (1458)
Q Consensus 1271 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~--~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1348 (1458)
+|+++++.+++|++++||||||.+|+|||||||..+ .+++|++++++++.+++++++.++|+||||.++|+|.+||||
T Consensus 536 ~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgG 615 (708)
T TIGR01193 536 FSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGG 615 (708)
T ss_pred EEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHH
Confidence 999999999999999999999999999999999876 468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhH
Q 000504 1349 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1349 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
||||++||||++++|+||+||||||+||++|++.|++.|++. +++|+|+||||++++..||+|++|++|+++|.|+|++
T Consensus 616 QrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~ 694 (708)
T TIGR01193 616 QKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDE 694 (708)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999999974 7899999999999999999999999999999999999
Q ss_pred HhhcCCChHHHHHH
Q 000504 1429 LLEDNSSSFSKLVA 1442 (1458)
Q Consensus 1429 Ll~~~~s~F~~l~~ 1442 (1458)
|+++ +|.|++|++
T Consensus 695 L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 695 LLDR-NGFYASLIH 707 (708)
T ss_pred HHhc-CCcHHHHhh
Confidence 9975 689999875
No 18
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=6.9e-74 Score=731.08 Aligned_cols=542 Identities=21% Similarity=0.270 Sum_probs=460.3
Q ss_pred HHHHHHHHHHhhhhhHHHhhcccccccccc---h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000504 898 LCQVLFQALQMGSNYWIAWATDEKRKVSRE---Q-LIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRA 973 (1458)
Q Consensus 898 ~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~---~-~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~a 973 (1458)
++.++...+.....++++...+.....+.. . +...++++.++..++.+++.++....+.+....++..+++++++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 111 (582)
T PRK11176 32 VALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGM 111 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333444445555566666444311111111 1 122233345556677777878888889999999999999999999
Q ss_pred ccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 974 PISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARE 1053 (1458)
Q Consensus 974 p~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~ 1053 (1458)
|.++|++...|++++|+++|++.+...+...+..++..++.+++.+++++..+|+++++++..+++.+++..++.+..++
T Consensus 112 ~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~ 191 (582)
T PRK11176 112 PVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRN 191 (582)
T ss_pred CHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999989999999999999999999999998887777666666666666676677
Q ss_pred HHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH-H
Q 000504 1054 LARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-L 1132 (1458)
Q Consensus 1054 l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~ 1132 (1458)
..+......+...+++.|.++|+.+||+|+.++++.+++.+..+...+..........|.....+++..+...++.++ .
T Consensus 192 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~ 271 (582)
T PRK11176 192 ISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAAS 271 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777788899999999999999999999999999999999998888887777777777776666665544333332 2
Q ss_pred HhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEe
Q 000504 1133 VTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELEN 1212 (1458)
Q Consensus 1133 ~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~n 1212 (1458)
.....+.+++|...++.++...+...+..+...+.++.+...+.+|+.++.+.++|.+. ... ...|..+.|+++|
T Consensus 272 ~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~---~~~--~~~~~~~~i~~~~ 346 (582)
T PRK11176 272 FPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDE---GKR--VIERAKGDIEFRN 346 (582)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCC---CCc--CCCCCCCeEEEEE
Confidence 33445788999988888888888889999999999999999999999999987655321 111 1123456899999
Q ss_pred eeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCC
Q 000504 1213 LLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDP 1292 (1458)
Q Consensus 1213 vs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp 1292 (1458)
|+|+|+++.+++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++||||||
T Consensus 347 vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~ 426 (582)
T PRK11176 347 VTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNV 426 (582)
T ss_pred EEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCc
Confidence 99999876667999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccHHHhcCcC--CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeC
Q 000504 1293 MLFQGTVRTNLDPL--EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDE 1370 (1458)
Q Consensus 1293 ~LF~gTIR~NLdp~--~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDE 1370 (1458)
++|+||||+||... ++++|+++++++++++++++++++|+||||.+||+|.+||||||||++||||++++|+||+|||
T Consensus 427 ~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDE 506 (582)
T PRK11176 427 HLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDE 506 (582)
T ss_pred eeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEEC
Confidence 99999999999864 3489999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHH
Q 000504 1371 ATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1371 aTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~ 1445 (1458)
|||+||++|++.|.+.|++..++||+|+||||++++..||+|++|++|+++|.|+|++|+++ ++.|++|++++.
T Consensus 507 ptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~-~~~y~~l~~~~~ 580 (582)
T PRK11176 507 ATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQ-NGVYAQLHKMQF 580 (582)
T ss_pred ccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhC-CChHHHHHHHHh
Confidence 99999999999999999998889999999999999999999999999999999999999975 589999987653
No 19
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.3e-73 Score=740.74 Aligned_cols=549 Identities=21% Similarity=0.251 Sum_probs=455.8
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccc-cccccc---hhHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 877 WTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK-RKVSRE---QLIGVFIFLSGGSSFFILGRAVLLA 952 (1458)
Q Consensus 877 ~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~-~~~~~~---~~l~vy~~l~~~~~~~~~~~~~~~~ 952 (1458)
+..++.+++..++. +..++++.++..++..+.++.+....+.. +..+.. .+...++++.++..++.+++.++..
T Consensus 135 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (694)
T TIGR03375 135 KHWFWSTLKESWPL--YRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLD 212 (694)
T ss_pred chHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456666543332 23344445566666777777776655421 111111 1222333344556677888999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000504 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1458)
Q Consensus 953 ~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v 1032 (1458)
..+.+...+++.++++++++.|++| ++.++|++++|+ +|++.+...+...+...+..++.+++.+++++.++|+++++
T Consensus 213 ~~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 290 (694)
T TIGR03375 213 VAGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999998 788999999999 79999999988887777777777888888888999998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHH
Q 000504 1033 FLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEW 1112 (1458)
Q Consensus 1033 ~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1112 (1458)
.+..+++++.+..++.+..++..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..++..+..+.......+
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666666666667777777777777788889999999999999999999999999999998888877777666555555
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCcc
Q 000504 1113 LCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPL 1191 (1458)
Q Consensus 1113 l~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1191 (1458)
......++..+...++.++ ......+.++.|..-.+.++...+...+..+...+.++.....+.+|+.++.+.|+|.+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 5544444443332222222 233446788888888888888888888889999999999999999999999988776432
Q ss_pred ccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCe
Q 000504 1192 VIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGV 1271 (1458)
Q Consensus 1192 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~ 1271 (1458)
. .......+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+
T Consensus 451 ~---~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~ 527 (694)
T TIGR03375 451 G---TRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGV 527 (694)
T ss_pred C---CCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 1 1111112345789999999999766667999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1272 DISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1272 dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
|+++++++++|++++||||||++|+|||||||...+ +++|+|++++++++++++++.++|+|+||.++|+|.|||||||
T Consensus 528 ~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQr 607 (694)
T TIGR03375 528 DIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQR 607 (694)
T ss_pred EhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHH
Confidence 999999999999999999999999999999999775 4899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHh
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
||++||||++++|+||+||||||+||++|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+||+
T Consensus 608 QRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl 687 (694)
T TIGR03375 608 QAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVL 687 (694)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999998
Q ss_pred hc
Q 000504 1431 ED 1432 (1458)
Q Consensus 1431 ~~ 1432 (1458)
++
T Consensus 688 ~~ 689 (694)
T TIGR03375 688 EA 689 (694)
T ss_pred HH
Confidence 65
No 20
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2e-73 Score=722.02 Aligned_cols=555 Identities=20% Similarity=0.246 Sum_probs=446.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccc---ccc---ccch--hHHHHHHHHHHHHHHHHHHHHHH
Q 000504 880 YSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK---RKV---SREQ--LIGVFIFLSGGSSFFILGRAVLL 951 (1458)
Q Consensus 880 y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~---~~~---~~~~--~l~vy~~l~~~~~~~~~~~~~~~ 951 (1458)
++.|++...+. +.+.+++.++..++.++.++.+.|..+.. ... .... .+..+.+++++..++.++..++.
T Consensus 7 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (574)
T PRK11160 7 FLKLYKRHWFM--LSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVS 84 (574)
T ss_pred HHHHHhhhhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555543322 22333444555556666666666655421 110 0011 11223334455666777778888
Q ss_pred HHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000504 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1458)
Q Consensus 952 ~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~ 1031 (1458)
...+.+....++.++++++++.|++||++.++|++++|+++|++.++..+...+..++.+++.+++.+++++..+|++.+
T Consensus 85 ~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 164 (574)
T PRK11160 85 HDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLAL 164 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999998999999999999999999999999987
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHh
Q 000504 1032 LFLVILGIS-IWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTM 1110 (1458)
Q Consensus 1032 v~~p~~~l~-~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~ 1110 (1458)
+++..+++. +.+..++.+..+...+......+.+.+.+.|+++|+.+||+|+.|+++.+++.+..++..+.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (574)
T PRK11160 165 TLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLT 244 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765444433 3345566666677777777888899999999999999999999999999999999888888777766666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCC
Q 000504 1111 EWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYG-LNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEA 1189 (1458)
Q Consensus 1111 ~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~-l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~ 1189 (1458)
.+.....+++..+...++.++......+..+.|....++.|. +.....+..+...+.++.....+.+|+.++.+.|+|.
T Consensus 245 ~~~~~~~~~~~~~~~~~i~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~ 324 (574)
T PRK11160 245 GLSQALMILANGLTVVLMLWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEV 324 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 666555565555444333333222224555555544444443 2233344555666777888899999999999876553
Q ss_pred ccccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEc
Q 000504 1190 PLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILID 1269 (1458)
Q Consensus 1190 ~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ID 1269 (1458)
+.. ...+ ..+..+.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|.+|
T Consensus 325 ~~~--~~~~--~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~ 400 (574)
T PRK11160 325 TFP--TTST--AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLN 400 (574)
T ss_pred CCC--cccC--CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 211 1111 113457899999999997654579999999999999999999999999999999999999999999999
Q ss_pred CeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000504 1270 GVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1348 (1458)
Q Consensus 1270 G~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1348 (1458)
|+|+++++.+++|+++++|||||.+|+|||||||... ++.+|++++++++++++++++.+ |+||||.+||+|.+||||
T Consensus 401 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgG 479 (574)
T PRK11160 401 GQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGG 479 (574)
T ss_pred CEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHH
Confidence 9999999999999999999999999999999999865 36899999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhH
Q 000504 1349 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1349 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
||||++||||++++|+||+||||||++|++|++.|++.|++..+++|+|+||||++++.+||+|++|++|+++|.|+|+|
T Consensus 480 qrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~ 559 (574)
T PRK11160 480 EQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQE 559 (574)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HhhcCCChHHHHHH
Q 000504 1429 LLEDNSSSFSKLVA 1442 (1458)
Q Consensus 1429 Ll~~~~s~F~~l~~ 1442 (1458)
|++ +++.|++|++
T Consensus 560 l~~-~~g~y~~l~~ 572 (574)
T PRK11160 560 LLA-QQGRYYQLKQ 572 (574)
T ss_pred HHh-cCcHHHHHHh
Confidence 996 4789999876
No 21
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.6e-72 Score=717.50 Aligned_cols=543 Identities=22% Similarity=0.307 Sum_probs=470.8
Q ss_pred HHHHHHHHHHHHhhhhhHHHhhcccccc---cc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000504 896 ILLCQVLFQALQMGSNYWIAWATDEKRK---VS-REQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVF 971 (1458)
Q Consensus 896 ~~~~~~~~~~~~~~~~~wl~~~~~~~~~---~~-~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl 971 (1458)
.+++.++..++....+++++...+.... .. ...+...++++.++..++.+++.++....+.+....++..++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~ 98 (571)
T TIGR02203 19 AGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLL 98 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555566666666543321111 11 1122334556666677788889999999999999999999999999
Q ss_pred cCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 972 RAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTA 1051 (1458)
Q Consensus 972 ~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~s 1051 (1458)
+.|.++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++++.+|+++++++.+.++.+++..++.+..
T Consensus 99 ~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~ 178 (571)
T TIGR02203 99 GLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRL 178 (571)
T ss_pred cCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888888888888888888
Q ss_pred HHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH
Q 000504 1052 RELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII 1131 (1458)
Q Consensus 1052 r~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~ 1131 (1458)
++..+......++..+.+.|+++|+.+||+++.++++.+++.+..++..+..........+.....+++..+...++.++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (571)
T TIGR02203 179 RRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFI 258 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888999999999999999999999999999999999999998888877777777777666666655443333322
Q ss_pred -HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEE
Q 000504 1132 -LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIEL 1210 (1458)
Q Consensus 1132 -~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~ 1210 (1458)
......+.+++|.+..+.++...+...+..+...+.++.+...+.+|+.++.+.++|.+. ...+.+ +..+.|++
T Consensus 259 g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~~~~~~--~~~~~i~~ 333 (571)
T TIGR02203 259 ALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDT---GTRAIE--RARGDVEF 333 (571)
T ss_pred HHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC---CCCCCC--CCCCeEEE
Confidence 333456788999988888898899999999999999999999999999999987655321 111111 24568999
Q ss_pred EeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEcc
Q 000504 1211 ENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQ 1290 (1458)
Q Consensus 1211 ~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQ 1290 (1458)
+||+|+|+++.+++|+|+||+|++||+|+|+|+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++|+||
T Consensus 334 ~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 413 (571)
T TIGR02203 334 RNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQ 413 (571)
T ss_pred EEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEcc
Confidence 99999997655679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccHHHhcCcCC--CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000504 1291 DPMLFQGTVRTNLDPLE--QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVL 1368 (1458)
Q Consensus 1291 dp~LF~gTIR~NLdp~~--~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlL 1368 (1458)
||.+|+||||+||..+. +.+|++++++++++++++++.++|+||||.++|+|.+||||||||+|||||++++|+||+|
T Consensus 414 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illL 493 (571)
T TIGR02203 414 DVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILIL 493 (571)
T ss_pred CcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999998763 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHH
Q 000504 1369 DEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEF 1444 (1458)
Q Consensus 1369 DEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~ 1444 (1458)
|||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++++++ ++.|++++.+.
T Consensus 494 DEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~-~~~~~~~~~~~ 568 (571)
T TIGR02203 494 DEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR-NGLYAQLHNMQ 568 (571)
T ss_pred eCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc-CCHHHHHHHHh
Confidence 9999999999999999999998899999999999999999999999999999999999999975 67899887754
No 22
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.3e-72 Score=726.11 Aligned_cols=561 Identities=21% Similarity=0.280 Sum_probs=464.9
Q ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccc-cccc--c-chhHHHHHHHHHHHHHHHHHHHHHH
Q 000504 876 KWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK-RKVS--R-EQLIGVFIFLSGGSSFFILGRAVLL 951 (1458)
Q Consensus 876 ~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~-~~~~--~-~~~l~vy~~l~~~~~~~~~~~~~~~ 951 (1458)
++..++.+++...+. +..++++.++..++.++.++.+....+.. +..+ . ..+...++++.++..++.+++.++.
T Consensus 126 ~~~~~~~~~~~~~~~--~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~ 203 (694)
T TIGR01846 126 GFSWFIPAIIRYRKQ--FREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLF 203 (694)
T ss_pred cHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566666543322 22333444555566666777776555421 1111 1 1223334445555677788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000504 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1458)
Q Consensus 952 ~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~ 1031 (1458)
...+.+...+++.++++++++.|++||++.++|++++|+ +|++.+...+...+..++..++.+++.+++++.++|++++
T Consensus 204 ~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 282 (694)
T TIGR01846 204 AHLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTG 282 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 6999999988877777777777777778888899999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 000504 1032 LFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTME 1111 (1458)
Q Consensus 1032 v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1111 (1458)
+++..++++..+..+..+..+...+......+...+++.|+++|+.+||+||.|+++.+++.+..++..+..+.......
T Consensus 283 i~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (694)
T TIGR01846 283 VVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGN 362 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666666665555555555555555666777889999999999999999999999999999999888888777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCc
Q 000504 1112 WLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAP 1190 (1458)
Q Consensus 1112 wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~ 1190 (1458)
+.....+++..+..+++.++ ......+.++.|....+.++...+...+..+...+.+++....+.+|+.++.+.|+|.+
T Consensus 363 ~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 442 (694)
T TIGR01846 363 IAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPR 442 (694)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 76666666655444333322 23344678888888888888888888899999999999999999999999998876643
Q ss_pred cccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcC
Q 000504 1191 LVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDG 1270 (1458)
Q Consensus 1191 ~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG 1270 (1458)
.. ...+.+ +..|.|+++||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|++||
T Consensus 443 ~~--~~~~~~--~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg 518 (694)
T TIGR01846 443 SA--GLAALP--ELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDG 518 (694)
T ss_pred CC--CCCCCC--CCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 11 111111 23578999999999987666799999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000504 1271 VDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1271 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
+|+++++.+++|+++++|||||.+|+|||||||... .+++|++++++++++++++++.++|+|+||.++|+|.+|||||
T Consensus 519 ~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq 598 (694)
T TIGR01846 519 VDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQ 598 (694)
T ss_pred EehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHH
Confidence 999999999999999999999999999999999875 4689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHH
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
|||++||||++++|+||+||||||+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 599 ~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l 678 (694)
T TIGR01846 599 RQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEEL 678 (694)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hhcCCChHHHHHHHH
Q 000504 1430 LEDNSSSFSKLVAEF 1444 (1458)
Q Consensus 1430 l~~~~s~F~~l~~~~ 1444 (1458)
+++ +|.|++|+++.
T Consensus 679 ~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 679 LAL-QGLYARLWQQQ 692 (694)
T ss_pred HHc-CChHHHHHHhh
Confidence 975 68999998753
No 23
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.1e-72 Score=664.89 Aligned_cols=514 Identities=21% Similarity=0.283 Sum_probs=433.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHH
Q 000504 928 QLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAG 1007 (1458)
Q Consensus 928 ~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~ 1007 (1458)
.+++..++..++..+....+.......+.++-..++.++++++.+.+..+-...|+|.+...++.-++.++..+...+..
T Consensus 41 ~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq 120 (559)
T COG4988 41 PLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQ 120 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555556666777777777788888888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHH
Q 000504 1008 LAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENR 1087 (1458)
Q Consensus 1008 ~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~ 1087 (1458)
...+.+..+.+++.++..+|...++++..+++...+.......++...+..-..-..+.+||-+.++|+.|+|+|+..+.
T Consensus 121 ~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~ 200 (559)
T COG4988 121 MFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEA 200 (559)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHH
Confidence 99999999999999999999877665544444433334445556666667777788899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHh-hcC-CCcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 1088 FLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVT-LPR-SAIDPSLAGLAATYGLNLNVLQAWVIWN 1165 (1458)
Q Consensus 1088 f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~-~~~-~~~~~~~~gl~l~y~l~l~~~~~~~i~~ 1165 (1458)
..++..+...++.+.........---+..+|++..+.++.+++.... +.. |.++-...-+++..+.-+-..+.-+-..
T Consensus 201 ~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~ 280 (559)
T COG4988 201 TEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSF 280 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99988888888888777766666556677888888777666655332 222 3444333334444455555556556666
Q ss_pred HHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCC
Q 000504 1166 LCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTG 1245 (1458)
Q Consensus 1166 ~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTG 1245 (1458)
+....+...+.+.+..+.+.|.+.+.. .......|....+|+.+|++++|+++. ++++|+||+++||++++|||+||
T Consensus 281 fH~~~~g~aa~d~i~~~l~~~~~~~~~--~~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~talvG~SG 357 (559)
T COG4988 281 FHAAAAGEAAADKLFTLLESPVATPGS--GEKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLTALVGASG 357 (559)
T ss_pred HHHHhhhhhHHHHHHHHhcCCCCCCCC--ccccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEEEEECCCC
Confidence 677777788899999999877664321 111122333345567779999998764 79999999999999999999999
Q ss_pred CCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCCC-CCHHHHHHHHHHcCcH
Q 000504 1246 SGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQ-HSDQEIWEVINKCHLA 1324 (1458)
Q Consensus 1246 SGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~-~sdeeI~~aL~~~~L~ 1324 (1458)
||||||+++|+|+.+|++|+|.+||+|..+++.+++|+++++|||+|++|+|||||||...+. .+||||+++++++++.
T Consensus 358 aGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~ 437 (559)
T COG4988 358 AGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLL 437 (559)
T ss_pred CCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHH
Confidence 999999999999999999999999999999999999999999999999999999999987754 8999999999999999
Q ss_pred HHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChh
Q 000504 1325 EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIP 1404 (1458)
Q Consensus 1325 ~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ 1404 (1458)
++++. |+|||+.+||+|.+|||||+||++||||++++++++++|||||+||.+||+.|++.|.+.++++|||+||||++
T Consensus 438 ~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~ 516 (559)
T COG4988 438 EFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLE 516 (559)
T ss_pred HhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHh
Q 000504 1405 TVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLR 1446 (1458)
Q Consensus 1405 ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~~ 1446 (1458)
.+.++|+|+|||+|+++|.|+|++|.+ +++.|++|+++...
T Consensus 517 ~~~~~D~I~vld~G~l~~~g~~~~L~~-~~~~y~~l~~~q~~ 557 (559)
T COG4988 517 DAADADRIVVLDNGRLVEQGTHEELSE-KQGLYANLLKQQEG 557 (559)
T ss_pred HHhcCCEEEEecCCceeccCCHHHHhh-cCcHHHHHHHHHhc
Confidence 999999999999999999999999997 47899999987654
No 24
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-72 Score=650.88 Aligned_cols=494 Identities=21% Similarity=0.300 Sum_probs=423.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHH
Q 000504 942 FFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIIL 1021 (1458)
Q Consensus 942 ~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v 1021 (1458)
+.-++.-+.......+.-..++.++++++...+..-..+...|+++||+..|++.+|..+-..+...+.++...+++.+.
T Consensus 73 ~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~ 152 (573)
T COG4987 73 AARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIG 152 (573)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHH
Confidence 33344444555677888889999999999999989999999999999999999999999999999999999988888888
Q ss_pred HHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Q 000504 1022 MSQAAWQVFPLFLV-ILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYS 1100 (1458)
Q Consensus 1022 ~~~~~~~~~~v~~p-~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~ 1100 (1458)
+.+.+|++.+.+.. ++.+.+.+...+.+..|...+.-...++.+.++|.|.+.|....+.||++++|.+.+....+.+.
T Consensus 153 L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~ 232 (573)
T COG4987 153 LSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWL 232 (573)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 88888888765544 44455566777778888888888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHH-HHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhHHHH
Q 000504 1101 CVTFHNCGTMEWLCLRINLLFNFAFFL-VLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVI-WNLCNVENKMISVER 1178 (1458)
Q Consensus 1101 ~~~~~~~~~~~wl~~~l~~l~~~~~~~-~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i-~~~~~le~~~~sveR 1178 (1458)
+..........|-...+.++.++.+.. .++.......|..+...+.+++.-.+.....+.-+. ..+.++....-|.+|
T Consensus 233 ~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~R 312 (573)
T COG4987 233 KAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARR 312 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHH
Confidence 999999999999999999888877763 333344345555442222222222122222222222 445678888889999
Q ss_pred HHHHhcCCCCCccccCCCCCCCCCCCCc-cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhc
Q 000504 1179 ILQFTNIPSEAPLVIKNSRPSPEWPSSG-KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFR 1257 (1458)
Q Consensus 1179 i~~~~~~~~E~~~~~~~~~~~~~wp~~g-~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~r 1257 (1458)
+.+..+.++|.... + +.-|..+ .++++||+|+|+.+.+++|+|+||++++||||||+||||||||||+++|.|
T Consensus 313 l~~i~~q~~e~~~~--~----~~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~ 386 (573)
T COG4987 313 LNDILDQKPEVTFP--D----EQTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAG 386 (573)
T ss_pred HhhhccCCcccCCC--c----cccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHh
Confidence 99988766654321 1 1112222 799999999999888899999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCc
Q 000504 1258 VVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDA 1336 (1458)
Q Consensus 1258 l~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt 1336 (1458)
.++|++|+|..+|.+++.++.+++|+.|++++|.+++|+||+|+||... .+.||||+|++|+++||.+++++.|+||+|
T Consensus 387 ~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t 466 (573)
T COG4987 387 AWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNT 466 (573)
T ss_pred ccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhc
Confidence 9999999999999999999999999999999999999999999999754 468999999999999999999999999999
Q ss_pred cccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEe
Q 000504 1337 PVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLD 1416 (1458)
Q Consensus 1337 ~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~ 1416 (1458)
.+||+|.+||||||||++|||+||++.++++|||||.+||++||+.|.+.|.+..+|+|+|+||||+..+..||||+|||
T Consensus 467 ~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~ 546 (573)
T COG4987 467 WLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLD 546 (573)
T ss_pred hhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecChhHHhhcCCChHHHHHH
Q 000504 1417 EGKVLEYDSPRQLLEDNSSSFSKLVA 1442 (1458)
Q Consensus 1417 ~G~ivE~g~p~~Ll~~~~s~F~~l~~ 1442 (1458)
+|+++|+|+|.+|++ ++|.|++|.+
T Consensus 547 ~Gkiie~G~~~~Ll~-~~g~~~~l~q 571 (573)
T COG4987 547 NGKIIEEGTHAELLA-NNGRYKRLYQ 571 (573)
T ss_pred CCeeeecCCHHhhhc-cccHHHHHhc
Confidence 999999999999998 5799999875
No 25
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-73 Score=721.27 Aligned_cols=513 Identities=22% Similarity=0.312 Sum_probs=428.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHH
Q 000504 927 EQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLA 1006 (1458)
Q Consensus 927 ~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~ 1006 (1458)
..+...|+.++++..+..++....+...+.+...+++.+.+++++|++++|||++..|.+..|+++|++.+.+.+...+.
T Consensus 71 ~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg 150 (1228)
T KOG0055|consen 71 SKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVG 150 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHH
Confidence 45666777888888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchH
Q 000504 1007 GLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQEN 1086 (1458)
Q Consensus 1007 ~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~ 1086 (1458)
.++..+.++++.+++.++..|+++++++++.++.......+.+..-.+...+...-+..-+...|++.+++|+.+|+.|+
T Consensus 151 ~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~ 230 (1228)
T KOG0055|consen 151 NFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEK 230 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcH
Confidence 99999999999999999999999999988888777777777666666666677777778889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHH---HHHHHHHH-HhhcCCCcCHHHHHHHHHHHHHHHHHHHHH
Q 000504 1087 RFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFA---FFLVLIIL-VTLPRSAIDPSLAGLAATYGLNLNVLQAWV 1162 (1458)
Q Consensus 1087 ~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~---~~~~~~~~-~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~ 1162 (1458)
+..+++.+.++...+...... -|.++...+...++ .+...++. ..+..+..++|.+...+.+.+.-...+...
T Consensus 231 ~e~~ry~~~L~~~~k~gi~~g---~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa 307 (1228)
T KOG0055|consen 231 KEIERYSKALENALKFGIKKG---LFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQA 307 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhcc
Confidence 999999988887766544322 22222222221111 11122221 222334455554433333333333333444
Q ss_pred HHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCCC-CcceeeeeEEeeCCcEEEEE
Q 000504 1163 IWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTL-PMVLKGITCTFPGEKKIGVV 1241 (1458)
Q Consensus 1163 i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~~vL~~is~~I~~GekvgIV 1241 (1458)
...+..+.+...|..+|.+.++..++.....+..++ .-..+|.|||+||+|+|+... .++|+|+||+|++||.||+|
T Consensus 308 ~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~--~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valV 385 (1228)
T KOG0055|consen 308 SPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRV--LSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALV 385 (1228)
T ss_pred ccchHHHhccccchHHHHHHhcCCCCCCcccccCCc--ccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEE
Confidence 445666777888899999987643332111111111 123579999999999997542 37999999999999999999
Q ss_pred CCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCC-CCCHHHHHHHHHH
Q 000504 1242 GRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINK 1320 (1458)
Q Consensus 1242 GrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sdeeI~~aL~~ 1320 (1458)
|+|||||||++++|.|+|+|++|+|+|||.||.+++.++||++||+|.|||+||++||+||+.... +.|++|+.+|++.
T Consensus 386 G~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ 465 (1228)
T KOG0055|consen 386 GPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKA 465 (1228)
T ss_pred CCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998765 6899999999999
Q ss_pred cCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEe
Q 000504 1321 CHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVA 1400 (1458)
Q Consensus 1321 ~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IA 1400 (1458)
++.++||.++|+|+||.|||+|..||||||||+||||||+|+|+||+||||||+||+++|+.+|++|++..+++|.|+||
T Consensus 466 ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVa 545 (1228)
T KOG0055|consen 466 ANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVA 545 (1228)
T ss_pred ccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHH
Q 000504 1401 HRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1401 Hrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~ 1445 (1458)
||++||+++|+|+||++|+|+|.|+|+||++++ |.|++||+...
T Consensus 546 HRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q~ 589 (1228)
T KOG0055|consen 546 HRLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQE 589 (1228)
T ss_pred eehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHHh
Confidence 999999999999999999999999999999876 99999997653
No 26
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2.7e-71 Score=698.99 Aligned_cols=505 Identities=20% Similarity=0.254 Sum_probs=412.2
Q ss_pred HHHHHHHHHHHHhhhhhHHHhhcccccccccchhH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000504 896 ILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLI-GV---FIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVF 971 (1458)
Q Consensus 896 ~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l-~v---y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl 971 (1458)
.+++.++..++.++.++.+++..+..........+ .. .+++.++..++.+++.+.....+.+...+++.+++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 97 (529)
T TIGR02868 18 AILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRLA 97 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34445556666666677777665421111111111 11 112334455666777778888889999999999999999
Q ss_pred cCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHHH
Q 000504 972 RAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWY-QAYYITT 1050 (1458)
Q Consensus 972 ~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~-~~~y~~~ 1050 (1458)
+.|.+||++.++|++++|+++|++.++..+...+..++..++.+++.+++++..+|.+.++++..++++.++ ..++.+.
T Consensus 98 ~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~ 177 (529)
T TIGR02868 98 RLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRA 177 (529)
T ss_pred ccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999998998999999999999999999999988776655554443 3444555
Q ss_pred HHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH
Q 000504 1051 ARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLI 1130 (1458)
Q Consensus 1051 sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~ 1130 (1458)
.++..+......+.+.+++.|+++|+.+||+|+.|+++.+++.+..++..+..........+......++..+...++.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (529)
T TIGR02868 178 ARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGALW 257 (529)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666677889999999999999999999999999999998888877776665555555444444444433333222
Q ss_pred H-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEE
Q 000504 1131 I-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIE 1209 (1458)
Q Consensus 1131 ~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~ 1209 (1458)
+ ......+.++.|.....+.|...+...+..+...+.++.+...+.+|+.++.+.++|.+.. +...+...+|..+.|+
T Consensus 258 ~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-~~~~~~~~~~~~~~I~ 336 (529)
T TIGR02868 258 AGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEG-VVPAAGALGLGKPTLE 336 (529)
T ss_pred HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCC-CCCCCcccCCCCceEE
Confidence 2 2334467788888888888888888888888888899999999999999999876653211 1111111234567899
Q ss_pred EEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEc
Q 000504 1210 LENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIP 1289 (1458)
Q Consensus 1210 ~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIp 1289 (1458)
|+||+|+|+++ +++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.+||+|++++ .+++|++++|||
T Consensus 337 ~~~vsf~Y~~~-~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V~ 414 (529)
T TIGR02868 337 LRDLSFGYPGS-PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVFA 414 (529)
T ss_pred EEEEEEecCCC-CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEEc
Confidence 99999999764 3599999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000504 1290 QDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVL 1368 (1458)
Q Consensus 1290 Qdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlL 1368 (1458)
|||++|+|||||||..+ ++.+||++++|++++++++++.++|+|+||.+||+|.|||||||||+|||||++++|+||||
T Consensus 415 Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliL 494 (529)
T TIGR02868 415 QDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLL 494 (529)
T ss_pred cCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999985 46899999999999999999999999999999999999999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCh
Q 000504 1369 DEATASIDTATDNVIQQTIREETSRCTVITVAHRI 1403 (1458)
Q Consensus 1369 DEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl 1403 (1458)
|||||+||++|++.|++.|++..+++|+|+||||+
T Consensus 495 DE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 495 DEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred eCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999988999999999995
No 27
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.4e-70 Score=700.12 Aligned_cols=548 Identities=19% Similarity=0.250 Sum_probs=446.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhhcccccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000504 893 VPVILLCQVLFQALQMGSNYWIAWATDEKRKVS-REQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVF 971 (1458)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~-~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl 971 (1458)
+.+++++.++..++.+..++++.+..+.-.... ...++..++++.++..+..+...........+...++..+++++++
T Consensus 21 ~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ 100 (588)
T PRK13657 21 GILLAVANVLLAAATFAEPILFGRIIDAISGKGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERII 100 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566667777777888876664221111 1112223333333333333334444444555555566679999999
Q ss_pred cCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 972 RAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTA 1051 (1458)
Q Consensus 972 ~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~s 1051 (1458)
+.|+++|++.+.|++++|+++|++.+...+...+..++..++..++.+++++..+|+++++++.++++++.+..++.+..
T Consensus 101 ~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~ 180 (588)
T PRK13657 101 QLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRKT 180 (588)
T ss_pred hCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999887777777777777777778888888999888887777777777788888888
Q ss_pred HHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH
Q 000504 1052 RELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII 1131 (1458)
Q Consensus 1052 r~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~ 1131 (1458)
++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..++..+..........+.....+++..+...++.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (588)
T PRK13657 181 KDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILVL 260 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888999999999999999999999999999999888888777766555555555444444443333322222
Q ss_pred -HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEE
Q 000504 1132 -LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIEL 1210 (1458)
Q Consensus 1132 -~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~ 1210 (1458)
......+.+++|.+..++.+...+...+..+...+.++.....+.+|+.++.+.+++.+.. ...++.. +..+.|++
T Consensus 261 g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~--~~~~~~~-~~~~~I~~ 337 (588)
T PRK13657 261 GAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP--PGAIDLG-RVKGAVEF 337 (588)
T ss_pred HHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC--CCCCCcC-CCCCeEEE
Confidence 3334567888888888888888888888888888888888899999999988765432211 1111111 23467999
Q ss_pred EeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEcc
Q 000504 1211 ENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQ 1290 (1458)
Q Consensus 1211 ~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQ 1290 (1458)
+||+|+|+++ +++|+|+||+++|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.+++|++++|+||
T Consensus 338 ~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q 416 (588)
T PRK13657 338 DDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVFQ 416 (588)
T ss_pred EEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEec
Confidence 9999999743 569999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000504 1291 DPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLD 1369 (1458)
Q Consensus 1291 dp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLD 1369 (1458)
||.+|+||||+||... ++.+|++++++++++++++++.++|+|+||.++++|.+||||||||+|||||++++|+||+||
T Consensus 417 ~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~iliLD 496 (588)
T PRK13657 417 DAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILILD 496 (588)
T ss_pred CcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999999999999876 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHH
Q 000504 1370 EATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1370 EaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~ 1445 (1458)
||||+||++|++.|.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ ++.|++|+++..
T Consensus 497 Epts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 497 EATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLRAQG 571 (588)
T ss_pred CCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHHHhh
Confidence 999999999999999999988789999999999999999999999999999999999999975 689999998654
No 28
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.3e-70 Score=700.42 Aligned_cols=561 Identities=22% Similarity=0.300 Sum_probs=462.4
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhccc-ccccc---cchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 878 TVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDE-KRKVS---REQLIGVFIFLSGGSSFFILGRAVLLAT 953 (1458)
Q Consensus 878 ~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~-~~~~~---~~~~l~vy~~l~~~~~~~~~~~~~~~~~ 953 (1458)
+.++.|++...+.. .+.+++.++...+.++.++.+....+. -+..+ ...++..++++.+...++.+++.++...
T Consensus 7 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (576)
T TIGR02204 7 AALWPFVRPYRGRV--LAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTW 84 (576)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555432222 223334455556666666666544432 11111 1123334444445556667778888889
Q ss_pred HHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000504 954 IAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLF 1033 (1458)
Q Consensus 954 ~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~ 1033 (1458)
.+.+....++..+++++++.|.++|++...|++++|+++|++.++..+...+..++..++.+++.+++++.++|++.+++
T Consensus 85 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (576)
T TIGR02204 85 LGERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLV 164 (576)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888888888889999999999999999988777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHH
Q 000504 1034 LVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWL 1113 (1458)
Q Consensus 1034 ~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1113 (1458)
+...++.+.+..++.+..+...+.....++...+++.|+++|+.+||+|+.++++.+++.+..++..+..........|+
T Consensus 165 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 165 LLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666667777777777778888899999999999999999999999999999988888777766665555666
Q ss_pred HHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccc
Q 000504 1114 CLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLV 1192 (1458)
Q Consensus 1114 ~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~ 1192 (1458)
.....++..+...++.++ ......+.++.|.......|...+...+..+...+.++.+...+.+|+.++.+.++|.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 555444443322222222 2334467788898888888888889999999999999999999999999998876553211
Q ss_pred cCCCCCCCCCCCCccEEEEeeeEEeCCCC-CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCe
Q 000504 1193 IKNSRPSPEWPSSGKIELENLLVQYNPTL-PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGV 1271 (1458)
Q Consensus 1193 ~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~ 1271 (1458)
....+..+|..+.|+++||+|+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.+||+
T Consensus 325 --~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~ 402 (576)
T TIGR02204 325 --AHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGV 402 (576)
T ss_pred --CCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCE
Confidence 111112234457899999999997543 57999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1272 DISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1272 dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
|+++++.+++|++++|+||||.+|+||||+||.+.. +.+|++++++++++++.+++.++|+|+||+++|+|.+||||||
T Consensus 403 ~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~ 482 (576)
T TIGR02204 403 DLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQR 482 (576)
T ss_pred EHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHH
Confidence 999999999999999999999999999999998754 5789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHh
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
||++||||++++|+||+||||||++|.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++++
T Consensus 483 Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~ 562 (576)
T TIGR02204 483 QRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELI 562 (576)
T ss_pred HHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999998
Q ss_pred hcCCChHHHHHHH
Q 000504 1431 EDNSSSFSKLVAE 1443 (1458)
Q Consensus 1431 ~~~~s~F~~l~~~ 1443 (1458)
+ +++.|++|++.
T Consensus 563 ~-~~~~~~~l~~~ 574 (576)
T TIGR02204 563 A-KGGLYARLARL 574 (576)
T ss_pred H-cCChHHHHHhh
Confidence 6 57899998864
No 29
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-73 Score=640.98 Aligned_cols=542 Identities=21% Similarity=0.332 Sum_probs=426.2
Q ss_pred HHHHhhhhhHHHhhccc--ccccccchhHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcc
Q 000504 904 QALQMGSNYWIAWATDE--KRKVSREQLIGVFIFLSG------GSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPI 975 (1458)
Q Consensus 904 ~~~~~~~~~wl~~~~~~--~~~~~~~~~l~vy~~l~~------~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~ 975 (1458)
.......+...+|..+. .|..........|+.+.+ ++.++.-+|+++......-+.+.+-.++++++....+
T Consensus 228 rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSl 307 (790)
T KOG0056|consen 228 RLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSL 307 (790)
T ss_pred HHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhce
Confidence 33344444444444431 222222333444554433 3456677788888888889999999999999999999
Q ss_pred ccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 976 SFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIIL-MSQAAWQVFPLFLVILGISIWYQAYYITTAREL 1054 (1458)
Q Consensus 976 ~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v-~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l 1054 (1458)
.|.-...+|+++.-+.+..+.+. .+...+.++.-.++.+...++. ....+|++.++++.++.+|..+....-.--.+.
T Consensus 308 rwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~ 386 (790)
T KOG0056|consen 308 RWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKA 386 (790)
T ss_pred eeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHH
Confidence 99999999988877766655554 3333333333334443333332 234567777766666655554322111111222
Q ss_pred HHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH-HHHHH
Q 000504 1055 ARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLV-LIILV 1133 (1458)
Q Consensus 1055 ~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~-~~~~~ 1133 (1458)
+|....+...-...-.+++-+..|+|-|++|+...+++.+.++++++..+........+...-+.+.++..... ++.++
T Consensus 387 rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY 466 (790)
T KOG0056|consen 387 RRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAY 466 (790)
T ss_pred HHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeee
Confidence 23322333333445678999999999999999999999999999998877766666555555444444433322 22233
Q ss_pred hhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEee
Q 000504 1134 TLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENL 1213 (1458)
Q Consensus 1134 ~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nv 1213 (1458)
....+..+.|-.-+..+|.+++-+.++|+-.-+..++++.+-.|++.+..+.++|- .+.+..++---.+|.|+|+||
T Consensus 467 ~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eV---vd~P~a~pl~~~~G~i~fsnv 543 (790)
T KOG0056|consen 467 RVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEV---VDLPGAPPLKVTQGKIEFSNV 543 (790)
T ss_pred eeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchh---hcCCCCCCccccCCeEEEEEe
Confidence 34466777788889999999999999999999999999999999999998755442 222222222235899999999
Q ss_pred eEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCC
Q 000504 1214 LVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPM 1293 (1458)
Q Consensus 1214 s~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~ 1293 (1458)
+|.|+|+. +||+||||+++||+.||+|||||+||||++++|+|+++.++|.|.|||+||+.+..+.||++||+||||.+
T Consensus 544 tF~Y~p~k-~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtv 622 (790)
T KOG0056|consen 544 TFAYDPGK-PVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTV 622 (790)
T ss_pred EEecCCCC-ceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcce
Confidence 99999875 59999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcC
Q 000504 1294 LFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEAT 1372 (1458)
Q Consensus 1294 LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaT 1372 (1458)
||++||..||... ...+|||+.+|.+.++++|-|-..|+|++|.|||+|-.||||||||+++||++||+|.|++|||||
T Consensus 623 LFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEAT 702 (790)
T KOG0056|consen 623 LFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEAT 702 (790)
T ss_pred eecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchh
Confidence 9999999999865 468999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHhhccc
Q 000504 1373 ASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRRTSK 1450 (1458)
Q Consensus 1373 sslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~~~~~~ 1450 (1458)
|+||..||+.||.++.+..+++|.|+||||++||.++|.|+|+++|+|+|.|+|+||+++++|.|++|++......+.
T Consensus 703 SALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~qqa~g~t 780 (790)
T KOG0056|consen 703 SALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQQAMGKT 780 (790)
T ss_pred hhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999755544433
No 30
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3e-69 Score=684.72 Aligned_cols=561 Identities=20% Similarity=0.269 Sum_probs=447.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhccccccccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 880 YSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSR-EQLIGVFIFLSGGSSFFILGRAVLLATIAIKT 958 (1458)
Q Consensus 880 y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~-~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~ 958 (1458)
++.|++..++ .+.+.+++.++..++.++.++.+.+..+.-...+. ..++..++++.+...+..++..........+.
T Consensus 10 l~~~l~~~k~--~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (585)
T TIGR01192 10 ALSYLNVHKN--RVLLIVIANITLAAITIAEPILFGRIIDAISSKSDVLPTLALWAGFGVFNTIAYVLVAREADRLAHGR 87 (585)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445554322 23344455566667777777777765542111111 11222222222233333333444444555555
Q ss_pred HHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000504 959 AQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILG 1038 (1458)
Q Consensus 959 s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~ 1038 (1458)
..+++.++++++++.|++||++.++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.++++++.+++
T Consensus 88 ~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 167 (585)
T TIGR01192 88 RATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGI 167 (585)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667799999999999999999999999999999999998888888777888888888888889999999888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHH
Q 000504 1039 ISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRIN 1118 (1458)
Q Consensus 1039 l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~ 1118 (1458)
+++++..++.+..++..+......+...+++.|+++|+.+||+|+.++++.+++.+..++..+..+.......+......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (585)
T TIGR01192 168 LYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNR 247 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888888888888899999999999999999999999999988888887766665544433333333333
Q ss_pred HHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCC
Q 000504 1119 LLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSR 1197 (1458)
Q Consensus 1119 ~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~ 1197 (1458)
++..+...++.++ ......+.++.|.+..+..|...+...+..+...+.++.....+.+|+.+..+.+++.+. ...
T Consensus 248 ~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~---~~~ 324 (585)
T TIGR01192 248 MASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREE---PAD 324 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---Ccc
Confidence 3333222222222 233446778888887788888888888888888888888889999999998876544211 111
Q ss_pred CCCCCC-CCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC
Q 000504 1198 PSPEWP-SSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI 1276 (1458)
Q Consensus 1198 ~~~~wp-~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i 1276 (1458)
+ ..++ ..+.|+++||+|+|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+|+.++
T Consensus 325 ~-~~~~~~~~~i~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~ 402 (585)
T TIGR01192 325 A-PELPNVKGAVEFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTV 402 (585)
T ss_pred C-CCCCCCCCeEEEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhC
Confidence 1 1122 35679999999999754 3589999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhcceEEEccCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000504 1277 GLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1355 (1458)
Q Consensus 1277 ~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1355 (1458)
+.+++|++++++||||.+|++|+|+||... .+.+|++++++++.+++++++.++|+|+||.++++|.+||||||||++|
T Consensus 403 ~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~l 482 (585)
T TIGR01192 403 TRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAI 482 (585)
T ss_pred CHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999875 4579999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCC
Q 000504 1356 ARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSS 1435 (1458)
Q Consensus 1356 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s 1435 (1458)
||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+++++ +++
T Consensus 483 ARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~-~~~ 561 (585)
T TIGR01192 483 ARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQ-KDG 561 (585)
T ss_pred HHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHH-CCC
Confidence 9999999999999999999999999999999998888999999999999999999999999999999999999997 468
Q ss_pred hHHHHHHHHHhhc
Q 000504 1436 SFSKLVAEFLRRT 1448 (1458)
Q Consensus 1436 ~F~~l~~~~~~~~ 1448 (1458)
.|+++++.+....
T Consensus 562 ~y~~l~~~~~~~~ 574 (585)
T TIGR01192 562 RFYKLLRRSGLLT 574 (585)
T ss_pred hHHHHHHhCcccc
Confidence 9999998765433
No 31
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-69 Score=687.69 Aligned_cols=510 Identities=21% Similarity=0.253 Sum_probs=426.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHH
Q 000504 931 GVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAF 1010 (1458)
Q Consensus 931 ~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~ 1010 (1458)
.+++++.++..++.+++.++....+.+...+++.++++++++.|++||++.++|++++|+++|++.+...+...+..++.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~ 119 (569)
T PRK10789 40 GTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVD 119 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 33444444555666677777778899999999999999999999999999999999999999999998777677777777
Q ss_pred HHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHH
Q 000504 1011 ALIQLLSIIILM-SQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFL 1089 (1458)
Q Consensus 1011 ~~~~~i~~~~v~-~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~ 1089 (1458)
.++..++.++++ +..+|++.++++..+++..++.+.+.+..++..+......+.+.+++.|+++|+.+||+|+.|+++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~ 199 (569)
T PRK10789 120 SLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQS 199 (569)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHH
Confidence 666655555555 4788888777766666666666666666666666667778889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 1090 LRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLI-ILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCN 1168 (1458)
Q Consensus 1090 ~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~ 1168 (1458)
+++.+..++..+..........+..........+...++.+ .......+.++.|.+..+..|...+...+..+...+.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~ 279 (569)
T PRK10789 200 ALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNI 279 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888777666655444444333333333222222211 12334467788888877778888787778888888889
Q ss_pred HHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCH
Q 000504 1169 VENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGK 1248 (1458)
Q Consensus 1169 le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGK 1248 (1458)
+.....+.+|+.++.+.++|.+. ...+.+ +..+.|+++|++|+|+++.+++|+|+||+|+|||++||||+|||||
T Consensus 280 ~~~~~~a~~ri~~ll~~~~~~~~---~~~~~~--~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGsGK 354 (569)
T PRK10789 280 VERGSAAYSRIRAMLAEAPVVKD---GSEPVP--EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGSGK 354 (569)
T ss_pred HHHHHHHHHHHHHHHcCCCcccC---CCCCCC--CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCCCH
Confidence 99999999999999886654321 111111 2356899999999998655679999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHH
Q 000504 1249 STLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIV 1327 (1458)
Q Consensus 1249 STLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i 1327 (1458)
|||+++|.|+++|++|+|.+||+|+++++.+++|++++++||+|.+|+||+|+||... .+++|++++++++.+++++++
T Consensus 355 STLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i 434 (569)
T PRK10789 355 STLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDI 434 (569)
T ss_pred HHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999876 468999999999999999999
Q ss_pred HhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhh
Q 000504 1328 RQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVI 1407 (1458)
Q Consensus 1328 ~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~ 1407 (1458)
.++|+|+||.++++|.+||||||||++||||++++|+||+||||||+||+++++.|++.|++..+++|+|+||||++++.
T Consensus 435 ~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~ 514 (569)
T PRK10789 435 LRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALT 514 (569)
T ss_pred HhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999878999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHHh
Q 000504 1408 DNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLR 1446 (1458)
Q Consensus 1408 ~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~~ 1446 (1458)
.||+|++|++|+++|.|+|++|+++ ++.|++|++....
T Consensus 515 ~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 515 EASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred cCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 9999999999999999999999964 6899999876543
No 32
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=4.4e-69 Score=678.91 Aligned_cols=514 Identities=21% Similarity=0.264 Sum_probs=424.6
Q ss_pred HHHHHHHHHHHhhhhhHHHhhcccc--cccc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000504 897 LLCQVLFQALQMGSNYWIAWATDEK--RKVS---REQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVF 971 (1458)
Q Consensus 897 ~~~~~~~~~~~~~~~~wl~~~~~~~--~~~~---~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl 971 (1458)
+++.++..++.+..++.+.+..+.. +... ...++..+++++++..++.+++.++....+.+...+++.+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~ 88 (529)
T TIGR02857 9 GLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVA 88 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566666666666655422 1111 1123444555566677778888889999999999999999999999
Q ss_pred cCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 972 RAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTA 1051 (1458)
Q Consensus 972 ~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~s 1051 (1458)
+.|.++|++.++|++++|+++|++.++..+...+..++..++.+++.+++++..+|.+.++++...++..++..++.+..
T Consensus 89 ~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~ 168 (529)
T TIGR02857 89 ALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAA 168 (529)
T ss_pred hCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888888888888888888888999877766655555544445555555
Q ss_pred HHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHH-H
Q 000504 1052 RELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVL-I 1130 (1458)
Q Consensus 1052 r~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~-~ 1130 (1458)
+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+..........+......++..+...++. +
T Consensus 169 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (529)
T TIGR02857 169 QAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVY 248 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666666777889999999999999999999999999999888887777666655566665555555544333322 2
Q ss_pred HHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEE
Q 000504 1131 ILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIEL 1210 (1458)
Q Consensus 1131 ~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~ 1210 (1458)
.......+.++.|....+..|...+...+..+...+.++.....+.+|+.++.+.+++... .. +...+..+.|++
T Consensus 249 ~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~----~~-~~~~~~~~~i~~ 323 (529)
T TIGR02857 249 IGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG----KA-PVTAAPAPSLEF 323 (529)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----Cc-CCCCCCCCeEEE
Confidence 2222236778888777777777777777888888899999999999999999975533211 11 111223468999
Q ss_pred EeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEcc
Q 000504 1211 ENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQ 1290 (1458)
Q Consensus 1211 ~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQ 1290 (1458)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.+++|++++||||
T Consensus 324 ~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q 403 (529)
T TIGR02857 324 SGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQ 403 (529)
T ss_pred EEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcC
Confidence 99999998655579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000504 1291 DPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLD 1369 (1458)
Q Consensus 1291 dp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLD 1369 (1458)
||.+|+|||||||... ++.+|+++++++++++++++++++|+||||.++|+|.+||||||||++||||++++|+||+||
T Consensus 404 ~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililD 483 (529)
T TIGR02857 404 HPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLD 483 (529)
T ss_pred CCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999999999999875 457999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEE
Q 000504 1370 EATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVL 1415 (1458)
Q Consensus 1370 EaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL 1415 (1458)
||||+||++|++.|++.|++..+++|+|+||||++++..||+|++|
T Consensus 484 E~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 484 EPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999988899999999999999999999986
No 33
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.9e-69 Score=626.30 Aligned_cols=510 Identities=22% Similarity=0.336 Sum_probs=393.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHH
Q 000504 927 EQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLA 1006 (1458)
Q Consensus 927 ~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~ 1006 (1458)
...+..|.+..+++.+|..++.+.+++...++-+....+.+.+.++..+++|.+..+|.+-++...-...+...+.-.+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999998877777666666666655555
Q ss_pred HHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcch
Q 000504 1007 GLAFALIQLLSIIILMS-QAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQE 1085 (1458)
Q Consensus 1007 ~~~~~~~~~i~~~~v~~-~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e 1085 (1458)
.++..++.+......+. -..+.+.++.+.....|..+..+..+.-...++....+.....+..-|++.+-.+||+||.|
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE 233 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNE 233 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccH
Confidence 55555444433332222 22333333333333333222111111111223333344445566778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH-hhcCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 1086 NRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILV-TLPRSAIDPSLAGLAATYGLNLNVLQAWVIW 1164 (1458)
Q Consensus 1086 ~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~ 1164 (1458)
++..+++...+.++-+......+....+.+.-..++......+..... -...+..+.+-.-+..+...++...+..+-.
T Consensus 234 ~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~ 313 (591)
T KOG0057|consen 234 EYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGS 313 (591)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHH
Confidence 999999999988887776665555544444444443332222222111 1122344445555555666666677776666
Q ss_pred HHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCC
Q 000504 1165 NLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRT 1244 (1458)
Q Consensus 1165 ~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrT 1244 (1458)
.+.++-..+.-.+-.....+. +. .+.+. +++--+..|.|+|+||+|.|.|+ ++||+|+||+|++||||||||+|
T Consensus 314 vyr~~~q~l~Dm~~~~~l~~~--~~--~i~~~-~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekVaIvG~n 387 (591)
T KOG0057|consen 314 VYRELRQALTDMRTLFILLEV--DE--DIQEA-ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKVAIVGSN 387 (591)
T ss_pred HHHHHHHHHHhHHHHHhhhhh--hh--hhhhc-cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEEEEECCC
Confidence 666666555544443332211 10 01111 11222346779999999999875 45999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCC-CCCHHHHHHHHHHcCc
Q 000504 1245 GSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHL 1323 (1458)
Q Consensus 1245 GSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sdeeI~~aL~~~~L 1323 (1458)
||||||++++|+|+++ .+|+|+|||+||++++++.+|+.||+||||..||++||-+||...+ ..+|||+.++++++++
T Consensus 388 GsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~ 466 (591)
T KOG0057|consen 388 GSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGL 466 (591)
T ss_pred CCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCc
Confidence 9999999999999999 9999999999999999999999999999999999999999998664 6899999999999999
Q ss_pred HHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCh
Q 000504 1324 AEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRI 1403 (1458)
Q Consensus 1324 ~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl 1403 (1458)
+|.+.++|+|++|.|||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|+....++|+|+|+||+
T Consensus 467 hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l 546 (591)
T KOG0057|consen 467 HDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRL 546 (591)
T ss_pred HHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred hhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHH
Q 000504 1404 PTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEF 1444 (1458)
Q Consensus 1404 ~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~ 1444 (1458)
+++++||+|+++|+|+++|+|+|+||++ +++.|+.++...
T Consensus 547 ~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 547 DLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQ 586 (591)
T ss_pred hhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccc
Confidence 9999999999999999999999999998 788887776543
No 34
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2e-66 Score=662.95 Aligned_cols=539 Identities=19% Similarity=0.245 Sum_probs=423.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 266 PQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRI 345 (1458)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~ 345 (1458)
++...+.+++.+++..++.++..++..+.|+++..+++.+..+.. .... .+.+++++++..++..++.....+...+.
T Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (588)
T PRK11174 13 LKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENI-PREA-LLPPFILLILLFVLRALLAWLRERVGFKA 90 (588)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445567788888888999999999999999999999997642211 1111 23334445555556666666666777789
Q ss_pred HHHHHHHHHHHHHHHhcccccCC---CCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000504 346 GIRVRSALTVLIYKRSMAIKFAG---PSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAA 421 (1458)
Q Consensus 346 g~~iR~~L~~~Iy~K~L~ls~~~---~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~g 421 (1458)
+.++...+...+|+|.++++... .++|+++|.+++|++++.+++. .+..++...+.+++++++++ .++|+.+++.
T Consensus 91 ~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~l~l~~ 169 (588)
T PRK11174 91 GQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVF-PINWAAGLIL 169 (588)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 99999999999999999987543 3899999999999999998864 56666666665555555444 2444455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHH----HHHHHHHHHHHHHHHHH
Q 000504 422 LFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKL----LRLREIERDSLKKYLYT 497 (1458)
Q Consensus 422 l~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I----~~~R~~El~~l~k~~~~ 497 (1458)
++++++...+...+.++.++.+++.++..++..+.+.|.++|+++||.|+||+.+.+++ ++.|+.+.+..+.....
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 170 LGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555666778888899999999999999999999999999999999999887776 44555555554443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 498 CSAIAFLFWASPTLVSVITFGVCILLKT--------PLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEF 569 (1458)
Q Consensus 498 ~a~~~~~~~~~p~~v~~~tF~~~~~~~~--------~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~f 569 (1458)
..+..++.. .+.++ ++.++.+.+.|. .+++..++.++.+...+..|+..++..+..+.++++|.+||.++
T Consensus 250 ~~~~~~~~~-~~~~~-~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~ 327 (588)
T PRK11174 250 SAVLEFFAS-ISIAL-VAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTF 327 (588)
T ss_pred HHHHHHHHH-HHHHH-HHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333322222 12212 223333333331 23344556666677788899999999999999999999999999
Q ss_pred hcccCCCCCCCCCC-CCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCc
Q 000504 570 IKEDNQKKPITEPT-SKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEI 647 (1458)
Q Consensus 570 L~~~e~~~~~~~~~-~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~ 647 (1458)
++.++..+.....+ .......|+++|++|.|+++ .+.|+| ||++++|+++||+|++|||||||+++|+|++
T Consensus 328 l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~~-------~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~ 400 (588)
T PRK11174 328 LETPLAHPQQGEKELASNDPVTIEAEDLEILSPDG-------KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL 400 (588)
T ss_pred HcCCCcccCCCccccCCCCCceEEEEeeEEeccCC-------CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 98765221111111 11123469999999877643 468999 9999999999999999999999999999999
Q ss_pred cCCCCcEEEECC-------------EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCccc
Q 000504 648 PRISGAAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSV 713 (1458)
Q Consensus 648 ~~~~G~~i~~~g-------------~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ 713 (1458)
|++|++ .++| .++||||+||+|++||||||.+|++ .++++++++++.|+++++++.+|+|++|.
T Consensus 401 -p~~G~I-~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~ 478 (588)
T PRK11174 401 -PYQGSL-KINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTP 478 (588)
T ss_pred -CCCcEE-EECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccc
Confidence 899987 8888 4899999999999999999999965 88999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEe
Q 000504 714 VGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMK 793 (1458)
Q Consensus 714 ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~ 793 (1458)
+||+|.+||||||||++||||+++||+|+||||||||||+++++++.+ .+....+++|+|+|||+++.+..||+|++|+
T Consensus 479 vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~-~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~ 557 (588)
T PRK11174 479 IGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQ-ALNAASRRQTTLMVTHQLEDLAQWDQIWVMQ 557 (588)
T ss_pred cccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHhCCCEEEEEecChHHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999998876 5677778999999999999999999999999
Q ss_pred CCeEEEcccchhhhhhcchHHHHHHHH
Q 000504 794 DGKIEQSGKYEDLIADQNSELVRQMKA 820 (1458)
Q Consensus 794 ~G~i~~~g~~~~l~~~~~~~~~~~~~~ 820 (1458)
+|+|++.|+++|+++ .+..+.++...
T Consensus 558 ~G~i~e~G~~~eL~~-~~~~y~~l~~~ 583 (588)
T PRK11174 558 DGQIVQQGDYAELSQ-AGGLFATLLAH 583 (588)
T ss_pred CCeEeecCCHHHHHh-cchHHHHHHHH
Confidence 999999999999998 56666666544
No 35
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.7e-66 Score=656.43 Aligned_cols=523 Identities=17% Similarity=0.155 Sum_probs=419.4
Q ss_pred HHHHHHHHHHHhhhhhHHHhhccccc-ccc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000504 897 LLCQVLFQALQMGSNYWIAWATDEKR-KVS---REQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFR 972 (1458)
Q Consensus 897 ~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~---~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ 972 (1458)
+++.++..++.+..++.+....+... ..+ ...++.+++++.++..++.+++.++....+.+....++.++++++++
T Consensus 12 ~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~ 91 (544)
T TIGR01842 12 GLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFS 91 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34445555666666776665554211 111 11233344444555667778888888899999999999999999999
Q ss_pred CccccccccChhhHHHHHhhhhhHHhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 973 APISFFDSTPSSRILNRCSTDQSTVDTDIPY-RLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTA 1051 (1458)
Q Consensus 973 ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~-~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~s 1051 (1458)
.|++. .|...+++++|++.+...+.. .+..++..++.++ .+++++..+|++.++++..+++.+.+..++.+..
T Consensus 92 ~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~ 165 (544)
T TIGR01842 92 ATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGLALLNNRAT 165 (544)
T ss_pred CcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 99842 366789999999999987765 3444444444443 3456788888887666554444445555555555
Q ss_pred HHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHH-H
Q 000504 1052 RELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVL-I 1130 (1458)
Q Consensus 1052 r~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~-~ 1130 (1458)
+...+......+...+++.|+++|+.+||+|+.|+.+.+++.+..++..+.................++..+...++. +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (544)
T TIGR01842 166 KKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGL 245 (544)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666677788899999999999999999999999999998888877666655444444433333333332222222 2
Q ss_pred HHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEE
Q 000504 1131 ILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIEL 1210 (1458)
Q Consensus 1131 ~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~ 1210 (1458)
.......+.+++|.+..+..|...+...+..+...+.++.....+.+|+.++.+.++|.+. ....+ +..+.|++
T Consensus 246 g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~~~~~---~~~~~i~~ 319 (544)
T TIGR01842 246 GAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP---AMPLP---EPEGHLSV 319 (544)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC---CCCCC---CCCCeEEE
Confidence 2233456788999888888888888888899999999999999999999999987655321 11111 23468999
Q ss_pred EeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEcc
Q 000504 1211 ENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQ 1290 (1458)
Q Consensus 1211 ~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQ 1290 (1458)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|++++++||
T Consensus 320 ~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q 399 (544)
T TIGR01842 320 ENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQ 399 (544)
T ss_pred EEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecC
Confidence 99999997655679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000504 1291 DPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLD 1369 (1458)
Q Consensus 1291 dp~LF~gTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLD 1369 (1458)
||.+|++|+|+|+..++ +++|++++++++.++++++++++|+|+||.++|+|.+||||||||++||||++++|+|||||
T Consensus 400 ~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ililD 479 (544)
T TIGR01842 400 DVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLD 479 (544)
T ss_pred CcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999998654 48999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhh
Q 000504 1370 EATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1370 EaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
||||+||++|++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|++|++
T Consensus 480 Epts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 480 EPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999875 5799999999999999999999999999999999999985
No 36
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=6.9e-67 Score=710.23 Aligned_cols=512 Identities=18% Similarity=0.236 Sum_probs=424.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHH
Q 000504 929 LIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGL 1008 (1458)
Q Consensus 929 ~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~ 1008 (1458)
+...+++++++..++.+++.++....+.+...+++.++++++++.|++|||..+.|++.+|++.|++.+...+...+..+
T Consensus 99 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~ 178 (1466)
T PTZ00265 99 IIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITI 178 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556667777788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHH
Q 000504 1009 AFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRF 1088 (1458)
Q Consensus 1009 ~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f 1088 (1458)
+..++.+++.++++++.+|.++++++.++++++++..++.+..+...+......+...+.+.|+++|+.+||+|+.|+++
T Consensus 179 ~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~ 258 (1466)
T PTZ00265 179 FTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTI 258 (1466)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHH
Confidence 99999999999999999999999888777777777777777777777777777788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH-HhhcC--------CCcCHHHHHHHHHHHHHHHHHH
Q 000504 1089 LLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIIL-VTLPR--------SAIDPSLAGLAATYGLNLNVLQ 1159 (1458)
Q Consensus 1089 ~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~-~~~~~--------~~~~~~~~gl~l~y~l~l~~~~ 1159 (1458)
.+++.+..+...+..........+......++..+..+++.++. ..... +.++++.+...+.+.+.....+
T Consensus 259 ~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l 338 (1466)
T PTZ00265 259 LKKFNLSEKLYSKYILKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFML 338 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHH
Confidence 99998888777766655444444333333333322222222221 11112 1234443332333333222333
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCC-CCcceeeeeEEeeCCcEE
Q 000504 1160 AWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKI 1238 (1458)
Q Consensus 1160 ~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Gekv 1238 (1458)
..+...+..+.....|.+|+.+.++.+++.+.. .+ ....|..+.|+|+||+|+|+.. ..++|+|+||+|++||++
T Consensus 339 ~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~-~~---~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~v 414 (1466)
T PTZ00265 339 TIILPNITEYMKSLEATNSLYEIINRKPLVENN-DD---GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTY 414 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CC---CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEE
Confidence 445566778888999999999999866553211 11 1112334589999999999753 236999999999999999
Q ss_pred EEECCCCCCHHHHHHHHhccCCCCCcEEEE-cCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCC----------
Q 000504 1239 GVVGRTGSGKSTLIQALFRVVEPSGGRILI-DGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE---------- 1307 (1458)
Q Consensus 1239 gIVGrTGSGKSTLl~~L~rl~~p~~G~I~I-DG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---------- 1307 (1458)
||||+||||||||+++|.|+|+|++|+|.+ ||.|+++++.+++|++|++|||+|.||++||++||....
T Consensus 415 aIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~ 494 (1466)
T PTZ00265 415 AFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALS 494 (1466)
T ss_pred EEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhc
Confidence 999999999999999999999999999999 579999999999999999999999999999999997521
Q ss_pred ------------------------------------------------CCCHHHHHHHHHHcCcHHHHHhcccccCcccc
Q 000504 1308 ------------------------------------------------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVA 1339 (1458)
Q Consensus 1308 ------------------------------------------------~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~ 1339 (1458)
+.+|++++++++++++++++.++|+|+||.++
T Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg 574 (1466)
T PTZ00265 495 NYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVG 574 (1466)
T ss_pred cccccccccccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeC
Confidence 35789999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeC
Q 000504 1340 EDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDE 1417 (1458)
Q Consensus 1340 e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~~DrVlvL~~ 1417 (1458)
++|.+||||||||++|||||+++|+|||||||||+||++++..|++.|++.. +++|+|+||||++++..||+|+||++
T Consensus 575 ~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~ 654 (1466)
T PTZ00265 575 SNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSN 654 (1466)
T ss_pred CCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999875 47999999999999999999999998
Q ss_pred C-----------------------------------------------EEEEecChhHHhhcCCChHHHHHHHH
Q 000504 1418 G-----------------------------------------------KVLEYDSPRQLLEDNSSSFSKLVAEF 1444 (1458)
Q Consensus 1418 G-----------------------------------------------~ivE~g~p~~Ll~~~~s~F~~l~~~~ 1444 (1458)
| +|+|+|+|+||+++++|.|+.|++..
T Consensus 655 g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q 728 (1466)
T PTZ00265 655 RERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQ 728 (1466)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhh
Confidence 6 59999999999987799999999654
No 37
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-68 Score=601.18 Aligned_cols=487 Identities=22% Similarity=0.388 Sum_probs=412.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCccccccccChh---hHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHH-H
Q 000504 948 AVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSS---RILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILM-S 1023 (1458)
Q Consensus 948 ~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G---~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~-~ 1023 (1458)
..++...+..+.+.+-.+.|.++.+..+.|.-+..+| |.+.|=++-++.+ +-..+...+-.++.+....+++ .
T Consensus 3 ~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i---~~~~l~~i~P~~~Ei~l~~vi~~~ 79 (497)
T COG5265 3 DRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETI---LRWILFNILPTLVEISLVAVILWR 79 (497)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHH---HHHHHHHhhHHHHHHHHHHHHHHh
Confidence 3456677777888888889999999999998877666 4455555455444 3344444444444444443333 3
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHH
Q 000504 1024 QAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVT 1103 (1458)
Q Consensus 1024 ~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~ 1103 (1458)
.++|+++.+.+..+++|.++.......--..+|.-..+.+...+.-.+++-+..|++.|+.|+.+..++.+.++.+.++.
T Consensus 80 ~~~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~ 159 (497)
T COG5265 80 VYGWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAA 159 (497)
T ss_pred hcccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHH
Confidence 46788888887777777666554444445666777777777888889999999999999999999999999999999999
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 000504 1104 FHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQF 1182 (1458)
Q Consensus 1104 ~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~ 1182 (1458)
.....+..||++.-..+........... ..-+..+..+.|..-+.-.+.+++..+++++-..+.++.+.....|+..+.
T Consensus 160 ~k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdL 239 (497)
T COG5265 160 IKVHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDL 239 (497)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHh
Confidence 8888888888887766665443333222 223346677888888888999999999999999999999999999999998
Q ss_pred hcCCCCCccccCCCCCCCCCC-CCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC
Q 000504 1183 TNIPSEAPLVIKNSRPSPEWP-SSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP 1261 (1458)
Q Consensus 1183 ~~~~~E~~~~~~~~~~~~~wp-~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p 1261 (1458)
.+.+.|-. +....++-|| ..|.|.|+||+|.|.+.. ++|+|+||++++|+++||||++|+||||+..+|+|+|++
T Consensus 240 l~~~~~v~---d~pda~~L~~~~~g~v~F~~V~F~y~~~r-~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~ 315 (497)
T COG5265 240 LDVEAEVS---DAPDAPPLWPVRLGAVAFINVSFAYDPRR-PILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDV 315 (497)
T ss_pred hccchhhc---cCCCCccccccccceEEEEEEEeeccccc-hhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCC
Confidence 87766532 2333455675 467899999999999875 499999999999999999999999999999999999999
Q ss_pred CCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccC
Q 000504 1262 SGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAE 1340 (1458)
Q Consensus 1262 ~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e 1340 (1458)
++|.|.|||+||..+..+.+|+.||+||||.+||+.|+..|+...+ ..+++|++.|+++++++++|+.+|+|+||.|||
T Consensus 316 ~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vge 395 (497)
T COG5265 316 NSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGE 395 (497)
T ss_pred cCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccch
Confidence 9999999999999999999999999999999999999999998654 689999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEE
Q 000504 1341 DGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKV 1420 (1458)
Q Consensus 1341 ~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~i 1420 (1458)
.|-.||||||||+++||++|++|+||+||||||+||..||+.||.+|++..+++|.++||||++||.++|.|+||++|+|
T Consensus 396 rglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i 475 (497)
T COG5265 396 RGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRI 475 (497)
T ss_pred heeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecChhHHhhcCCChHHHHHH
Q 000504 1421 LEYDSPRQLLEDNSSSFSKLVA 1442 (1458)
Q Consensus 1421 vE~g~p~~Ll~~~~s~F~~l~~ 1442 (1458)
+|.|+|++|+++ +|.|++|+.
T Consensus 476 ~erg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 476 VERGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred EecCcHHHHHHc-CChHHHHhc
Confidence 999999999975 899999874
No 38
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-66 Score=621.38 Aligned_cols=465 Identities=25% Similarity=0.376 Sum_probs=354.4
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCC----CCcEEEECC-----
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRI----SGAAIKVHG----- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~----~G~~i~~~g----- 659 (1458)
.++++|.+.++.... ...+.++| ||++.+||++||+|.+||||||+.++|.|.+++. +|++ .++|
T Consensus 5 lL~V~nL~v~~~~~~----~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I-~~~g~dl~~ 79 (539)
T COG1123 5 LLEVENLTVEFATDG----GRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEV-ILDGRDLLG 79 (539)
T ss_pred eEEEeceEEEEecCC----cceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEE-EECCcchhc
Confidence 688999988887541 22468899 9999999999999999999999999999999876 7876 5665
Q ss_pred ------------EEEEEcCCCC-CCC--CcHHHHHhc----CCCC-CHHHHHHH---HHHhhhhhhHHhhcCCCcccccC
Q 000504 660 ------------KKAYVPQSSW-IQT--GTIRENILF----GKDM-RQSFYEEV---LEGCALNQDIEMWADGDLSVVGE 716 (1458)
Q Consensus 660 ------------~~ayv~Q~~~-i~~--~Ti~enI~f----g~~~-~~~~y~~v---l~~c~l~~dl~~l~~gd~t~ig~ 716 (1458)
.+||++|+|+ .+| .||.+-|.= .... .++..+++ ++..+|.+. ... +.
T Consensus 80 l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~-------~~~--~~ 150 (539)
T COG1123 80 LSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDP-------ERR--DR 150 (539)
T ss_pred CCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCCh-------hhh--cc
Confidence 3799999986 233 477666642 2222 12222222 333333322 111 45
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEe
Q 000504 717 RGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMK 793 (1458)
Q Consensus 717 ~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~ 793 (1458)
..+.|||||||||.||+||..+|+++|+||||+|||+.++.+|.+ +++.+. .|.++|+||||+..+.+ ||+|+||+
T Consensus 151 yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~-llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~ 229 (539)
T COG1123 151 YPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILD-LLKDLQRELGMAVLFITHDLGVVAELADRVVVMY 229 (539)
T ss_pred CCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHH-HHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEE
Confidence 788999999999999999999999999999999999999999987 455443 48999999999999876 99999999
Q ss_pred CCeEEEcccchhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhcC
Q 000504 794 DGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELG 873 (1458)
Q Consensus 794 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g 873 (1458)
+|++++.|+.++++.+....+...+-+
T Consensus 230 ~G~iVE~G~~~~i~~~p~hpYT~~Ll~----------------------------------------------------- 256 (539)
T COG1123 230 KGEIVETGPTEEILSNPQHPYTRGLLA----------------------------------------------------- 256 (539)
T ss_pred CCEEEEecCHHHHHhccCCcccHHHHh-----------------------------------------------------
Confidence 999999999999876211111000000
Q ss_pred cchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 874 RVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLAT 953 (1458)
Q Consensus 874 ~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~ 953 (1458)
..|..
T Consensus 257 ----------------------------------------------a~p~~----------------------------- 261 (539)
T COG1123 257 ----------------------------------------------AVPRL----------------------------- 261 (539)
T ss_pred ----------------------------------------------hCCCc-----------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000504 954 IAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLF 1033 (1458)
Q Consensus 954 ~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~ 1033 (1458)
T Consensus 262 -------------------------------------------------------------------------------- 261 (539)
T COG1123 262 -------------------------------------------------------------------------------- 261 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHH
Q 000504 1034 LVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWL 1113 (1458)
Q Consensus 1034 ~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1113 (1458)
T Consensus 262 -------------------------------------------------------------------------------- 261 (539)
T COG1123 262 -------------------------------------------------------------------------------- 261 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCcccc
Q 000504 1114 CLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVI 1193 (1458)
Q Consensus 1114 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~ 1193 (1458)
..+..
T Consensus 262 ------------------------------------------------------------------------~~~~~--- 266 (539)
T COG1123 262 ------------------------------------------------------------------------GDEKI--- 266 (539)
T ss_pred ------------------------------------------------------------------------ccccc---
Confidence 00000
Q ss_pred CCCCCCCCCCCCccEEEEeeeEEeCC---------CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCc
Q 000504 1194 KNSRPSPEWPSSGKIELENLLVQYNP---------TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGG 1264 (1458)
Q Consensus 1194 ~~~~~~~~wp~~g~I~~~nvs~~Y~~---------~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G 1264 (1458)
........-+...-++++|++.+|.. +...+++||||++++||.+||||.||||||||.++|+|+++|++|
T Consensus 267 ~~~~~~~~~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G 346 (539)
T COG1123 267 IRLPRRGPLRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSG 346 (539)
T ss_pred cccccccccccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCc
Confidence 00000000001234789999999974 124689999999999999999999999999999999999999999
Q ss_pred EEEEcCee--CCCCCHHHHhcceEEEccCCCCc---cccHHHhcC-cCCC---C----CHHHHHHHHHHcCcHH-HHHhc
Q 000504 1265 RILIDGVD--ISMIGLQDLRSRLSIIPQDPMLF---QGTVRTNLD-PLEQ---H----SDQEIWEVINKCHLAE-IVRQD 1330 (1458)
Q Consensus 1265 ~I~IDG~d--I~~i~l~~LR~~i~iIpQdp~LF---~gTIR~NLd-p~~~---~----sdeeI~~aL~~~~L~~-~i~~l 1330 (1458)
+|.++|.| .+.-....+|+++-+|.|||+-. ..||+++|. |... . ..+.+-+.+++++|.+ +..+.
T Consensus 347 ~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ry 426 (539)
T COG1123 347 SIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRY 426 (539)
T ss_pred eEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcC
Confidence 99999977 33333556888999999999633 359999985 4321 1 1234777789998875 33333
Q ss_pred ccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh
Q 000504 1331 QRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID 1408 (1458)
Q Consensus 1331 p~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~ 1408 (1458)
| ..||||||||+||||||..+|++||+|||||+||+.+.+.|.+.|++..+ +.|.|+|||++..+..
T Consensus 427 P-----------~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~ 495 (539)
T COG1123 427 P-----------HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRY 495 (539)
T ss_pred c-----------hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHh
Confidence 3 46999999999999999999999999999999999999999999886543 6899999999999987
Q ss_pred -cCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHH
Q 000504 1409 -NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAE 1443 (1458)
Q Consensus 1409 -~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~ 1443 (1458)
||||.||++|+|||.|+.++..+++...|.+...+
T Consensus 496 i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 496 IADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred hCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHH
Confidence 99999999999999999999999888777766543
No 39
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-66 Score=659.95 Aligned_cols=483 Identities=23% Similarity=0.359 Sum_probs=354.1
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1458)
..++++|++++|.... ...+.+++ ||++++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 11 ~~l~v~~l~~~y~~~~----~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i-~~~g~~~~~~~~ 85 (623)
T PRK10261 11 DVLAVENLNIAFMQEQ----QKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLV-QCDKMLLRRRSR 85 (623)
T ss_pred ceEEEeceEEEecCCC----CceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEE-EECCEEeccccc
Confidence 4689999999996420 12468999 99999999999999999999999999999999999986 4432
Q ss_pred -------------------EEEEEcCCC--CC-CCCcHHHHHhcCCC----CCH----HHHHHHHHHhhhhhhHHhhcCC
Q 000504 660 -------------------KKAYVPQSS--WI-QTGTIRENILFGKD----MRQ----SFYEEVLEGCALNQDIEMWADG 709 (1458)
Q Consensus 660 -------------------~~ayv~Q~~--~i-~~~Ti~enI~fg~~----~~~----~~y~~vl~~c~l~~dl~~l~~g 709 (1458)
.+|||+|+| -+ ...||+|||.++.. .+. ++..++++..++...
T Consensus 86 ~~~~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~------- 158 (623)
T PRK10261 86 QVIELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA------- 158 (623)
T ss_pred cccccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh-------
Confidence 489999998 34 34699999998632 122 122233333333110
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhcc-C
Q 000504 710 DLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-A 786 (1458)
Q Consensus 710 d~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~ 786 (1458)
.........+|||||||||+|||||+.+|+++||||||++||+.+...+.+ ++..+. + ++|||+||||++++.. |
T Consensus 159 -~~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~-ll~~l~~~~g~tvi~itHdl~~~~~~a 236 (623)
T PRK10261 159 -QTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQ-LIKVLQKEMSMGVIFITHDMGVVAEIA 236 (623)
T ss_pred -hhHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHH-HHHHHHHhcCCEEEEEcCCHHHHHHhC
Confidence 112456778999999999999999999999999999999999999888776 455543 3 7999999999999865 9
Q ss_pred CEEEEEeCCeEEEcccchhhhhhcchHHHH-HHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCC
Q 000504 787 DLVLVMKDGKIEQSGKYEDLIADQNSELVR-QMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRS 865 (1458)
Q Consensus 787 D~i~~l~~G~i~~~g~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (1458)
|+|++|++|++++.|+++++.......+.. ++.. . +.. .
T Consensus 237 dri~vl~~G~i~~~g~~~~~~~~~~~~~~~~l~~~-------~--------------------------~~~-~------ 276 (623)
T PRK10261 237 DRVLVMYQGEAVETGSVEQIFHAPQHPYTRALLAA-------V--------------------------PQL-G------ 276 (623)
T ss_pred CEEEEeeCCeecccCCHHHhhcCCCChhhhhhhhc-------c--------------------------Ccc-c------
Confidence 999999999999999988775411100000 0000 0 000 0
Q ss_pred ccchhhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHH
Q 000504 866 QDEDTELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFIL 945 (1458)
Q Consensus 866 ~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~ 945 (1458)
+ ..|..
T Consensus 277 --~--~~~~~---------------------------------------------------------------------- 282 (623)
T PRK10261 277 --A--MKGLD---------------------------------------------------------------------- 282 (623)
T ss_pred --c--ccccc----------------------------------------------------------------------
Confidence 0 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 946 GRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQA 1025 (1458)
Q Consensus 946 ~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~ 1025 (1458)
.| ++ .+
T Consensus 283 ---------------------------~~---------~~---------------~~----------------------- 288 (623)
T PRK10261 283 ---------------------------YP---------RR---------------FP----------------------- 288 (623)
T ss_pred ---------------------------CC---------cc---------------cc-----------------------
Confidence 00 00 00
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Q 000504 1026 AWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFH 1105 (1458)
Q Consensus 1026 ~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~ 1105 (1458)
T Consensus 289 -------------------------------------------------------------------------------- 288 (623)
T PRK10261 289 -------------------------------------------------------------------------------- 288 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcC
Q 000504 1106 NCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNI 1185 (1458)
Q Consensus 1106 ~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~ 1185 (1458)
. .. ...
T Consensus 289 -------------------------------~--~~-----------------------------------------~~~ 294 (623)
T PRK10261 289 -------------------------------L--IS-----------------------------------------LEH 294 (623)
T ss_pred -------------------------------c--cc-----------------------------------------ccc
Confidence 0 00 000
Q ss_pred CC-CCccccCCCCCCCCCCCCccEEEEeeeEEeCCC---------CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHH
Q 000504 1186 PS-EAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT---------LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQAL 1255 (1458)
Q Consensus 1186 ~~-E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~---------~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L 1255 (1458)
+. +.+..... ..+ +...-++++|++++|+.. ...+|+|+||+|++||++||+|+||||||||+++|
T Consensus 295 ~~~~~~~~~~~-~~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i 370 (623)
T PRK10261 295 PAKQEPPIEQD-TVV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRAL 370 (623)
T ss_pred ccccCcccccc-ccc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 00 00000000 000 011248999999999621 13599999999999999999999999999999999
Q ss_pred hccCCCCCcEEEEcCeeCCCCCHH---HHhcceEEEccCC--CCccc-cHHHhcCc-C---CCCC----HHHHHHHHHHc
Q 000504 1256 FRVVEPSGGRILIDGVDISMIGLQ---DLRSRLSIIPQDP--MLFQG-TVRTNLDP-L---EQHS----DQEIWEVINKC 1321 (1458)
Q Consensus 1256 ~rl~~p~~G~I~IDG~dI~~i~l~---~LR~~i~iIpQdp--~LF~g-TIR~NLdp-~---~~~s----deeI~~aL~~~ 1321 (1458)
.|+.+|++|+|.++|.++...+.. .+|++++||||+| .++.. |+++|+.. . +... ++++.+.|+.+
T Consensus 371 ~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ 450 (623)
T PRK10261 371 LRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERV 450 (623)
T ss_pred HcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHc
Confidence 999999999999999999877643 4678899999998 36654 99999852 1 1111 24567788888
Q ss_pred CcH-HHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEE
Q 000504 1322 HLA-EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVIT 1398 (1458)
Q Consensus 1322 ~L~-~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~ 1398 (1458)
++. +.. +..+ ..||||||||++|||||+.+|++|||||||++||..+.+.|.+.|++.. .+.|||+
T Consensus 451 gL~~~~~-------~~~~----~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~ 519 (623)
T PRK10261 451 GLLPEHA-------WRYP----HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLF 519 (623)
T ss_pred CCCHHHh-------hCCc----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 874 332 3333 3699999999999999999999999999999999999999999998754 3689999
Q ss_pred EecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHH-HHH
Q 000504 1399 VAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSK-LVA 1442 (1458)
Q Consensus 1399 IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~-l~~ 1442 (1458)
|||+++.+.. ||||++|++|+++|.|+++++++++...|.+ ++.
T Consensus 520 isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 520 ISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred EeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHh
Confidence 9999999876 9999999999999999999998776555543 444
No 40
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.5e-64 Score=604.60 Aligned_cols=540 Identities=23% Similarity=0.316 Sum_probs=430.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 268 VIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSG-KHDHS-SYHYGLVLASVFLFAKTVESLTQRQWYFGANRI 345 (1458)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~-~~~~~-~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~ 345 (1458)
.+.+..|+.+..+.++.++.......-|.++.++++.+.. .+... ..+....++++.+...+...+-..++.+...|+
T Consensus 140 ~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv 219 (716)
T KOG0058|consen 140 GLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGERV 219 (716)
T ss_pred HHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445568888888888888888888899999999998876 22201 112233444444444444444445556667777
Q ss_pred HHHHHHHHHHHHHHHhcccccCCCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000504 346 GIRVRSALTVLIYKRSMAIKFAGPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFS 424 (1458)
Q Consensus 346 g~~iR~~L~~~Iy~K~L~ls~~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~ 424 (1458)
..|+|..+...+-+.-...-. ...+|++++.++.|++-+.+.+. ++.+..-..+|...++.+++. +.|-.++..+++
T Consensus 220 ~~rlR~~lF~sil~QdiaFFD-~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~-~S~~Ltlv~~i~ 297 (716)
T KOG0058|consen 220 VARLRTDLFRSLLRQDIAFFD-ENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFS-LSWRLTLVTLIV 297 (716)
T ss_pred HHHHHHHHHHHHHhhhhhhhc-cCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh-hhHHHHHHHHHH
Confidence 778887776666665543322 22799999999999999988754 677777777888888877663 344556666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 425 TIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQE----FLKKLLRLREIERDSLKKYLYTCSA 500 (1458)
Q Consensus 425 ~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~----f~~~I~~~R~~El~~l~k~~~~~a~ 500 (1458)
+.+++.+...+++..++.-++..++.-+-.+...|.|++||+|+.|+-|+. |.+++++.++. -+|-....++
T Consensus 298 ~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i----~~k~a~a~~~ 373 (716)
T KOG0058|consen 298 VPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKL----SKKEAVAYGI 373 (716)
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHH----HHHHHHHhhH
Confidence 666677777778888888777777777788899999999999999999986 44444443332 2222222221
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 000504 501 IAFL--FWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKP 578 (1458)
Q Consensus 501 ~~~~--~~~~p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~ 578 (1458)
.... +..--..++++.+|.+...++.+|++...+++.+-..+..++..+....+.++++..+-+|+-+|++.+++-+.
T Consensus 374 f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~ 453 (716)
T KOG0058|consen 374 FFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPL 453 (716)
T ss_pred hHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCC
Confidence 1111 11122456677888999999999999999999999999999999999999999999999999999998762221
Q ss_pred -CCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEE
Q 000504 579 -ITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIK 656 (1458)
Q Consensus 579 -~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~ 656 (1458)
....|. .-...|+|+|++|+||.+ ++.++|+| ||+|+|||.||+|||+||||||+.++|+..++|++|++ .
T Consensus 454 ~G~~~p~-~~~G~IeF~~VsFaYP~R-----p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~I-l 526 (716)
T KOG0058|consen 454 TGTLAPD-HLQGVIEFEDVSFAYPTR-----PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRI-L 526 (716)
T ss_pred CCccccc-cccceEEEEEeeeecCCC-----CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeE-E
Confidence 111222 345689999999999988 67899999 99999999999999999999999999999999999997 8
Q ss_pred ECC-------------EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCC
Q 000504 657 VHG-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1458)
Q Consensus 657 ~~g-------------~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LS 722 (1458)
++| +||+|.|+|.+|++||+|||.+|.+ .++++.+++.+.+.-++.+..+|+|.+|.+||+|..||
T Consensus 527 lDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLS 606 (716)
T KOG0058|consen 527 LDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLS 606 (716)
T ss_pred ECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcccccc
Confidence 888 3799999999999999999999986 34566777788888888999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEccc
Q 000504 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~ 802 (1458)
|||||||||||||++||.|+||||.|||||+++ +++.++.+...++++|||+|.|+++.+++||+|+++++|++++.|+
T Consensus 607 GGQKQRIAIARALlr~P~VLILDEATSALDaeS-E~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~ 685 (716)
T KOG0058|consen 607 GGQKQRIAIARALLRNPRVLILDEATSALDAES-EYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGT 685 (716)
T ss_pred chHHHHHHHHHHHhcCCCEEEEechhhhcchhh-HHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEeccc
Confidence 999999999999999999999999999999986 6777888988889999999999999999999999999999999999
Q ss_pred chhhhhhcchHHHHHHHHh
Q 000504 803 YEDLIADQNSELVRQMKAH 821 (1458)
Q Consensus 803 ~~~l~~~~~~~~~~~~~~~ 821 (1458)
++|+++..++.+.++++.+
T Consensus 686 h~eLl~~~~gly~~Lv~~q 704 (716)
T KOG0058|consen 686 HDELLSKPNGLYAKLVQRQ 704 (716)
T ss_pred HHHHhhCcccHHHHHHHHh
Confidence 9999996667788887654
No 41
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2.8e-64 Score=636.11 Aligned_cols=516 Identities=17% Similarity=0.138 Sum_probs=401.1
Q ss_pred HHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccc
Q 000504 897 LLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPIS 976 (1458)
Q Consensus 897 ~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ 976 (1458)
+++.++.....++..+.++.+.+.... .....+..++++.++..++.++..++....+.+...+++.++++++++.|++
T Consensus 24 ~~~~~~~~~~~~~~~~~i~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~ 102 (555)
T TIGR01194 24 IALGLAGGLAIIALLASINNAIHEENF-LGQGSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAPIE 102 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 334444555556666666655532111 1111233355555666677888888889999999999999999999999999
Q ss_pred cccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 977 FFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELAR 1056 (1458)
Q Consensus 977 ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~r 1056 (1458)
||++.++|++++|+++|++.++..+. .+..++..++.+++.++++++.+|.+.++++.++++.+++..+..+..++..+
T Consensus 103 ~~~~~~~G~l~srl~~Dv~~i~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~ 181 (555)
T TIGR01194 103 EIDRRGAHNLIPLLTHDIDQINAFLF-IFPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKFFH 181 (555)
T ss_pred HHHhcCcchhhHHHhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998875 46677777888888888899999999888776666655555555555555556
Q ss_pred HHhhhhchHHHHHHHhhhhhHHHHhhcchH--HHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 000504 1057 MVGTRKAPILHHFSESIAGATTIRCFNQEN--RFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVT 1134 (1458)
Q Consensus 1057 l~~~~~spl~~~~~Etl~G~~tIraf~~e~--~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~ 1134 (1458)
......+.+.+++.|.+.|+.++|+|+.++ ...+++.+..++..+................+++..+...+..++.
T Consensus 182 ~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 259 (555)
T TIGR01194 182 AARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGCALFAA-- 259 (555)
T ss_pred HHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 666677889999999999999999999954 4455555555555544433222222222222222222111111111
Q ss_pred hcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCcccc--CCCCC---CCCCCCCccEE
Q 000504 1135 LPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVI--KNSRP---SPEWPSSGKIE 1209 (1458)
Q Consensus 1135 ~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~--~~~~~---~~~wp~~g~I~ 1209 (1458)
...+.++.|.....+.|...+...+..+...+.++++...+.+|+.++.+.+.+++... ++... .+..+..+.|+
T Consensus 260 ~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 339 (555)
T TIGR01194 260 AMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDSIE 339 (555)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCceEE
Confidence 11256677777777788888888888889999999999999999999976432221110 00000 01112346899
Q ss_pred EEeeeEEeCCC---CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1210 LENLLVQYNPT---LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1210 ~~nvs~~Y~~~---~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
++||+|+|++. .+++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+++++.+++|++++
T Consensus 340 ~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 419 (555)
T TIGR01194 340 LKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFS 419 (555)
T ss_pred EEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCc
Confidence 99999999753 236999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEE
Q 000504 1287 IIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRIL 1366 (1458)
Q Consensus 1287 iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1366 (1458)
++||||.+|++|+|+|+. .+.+|++++++++++++++++..+|+|+||. .+||||||||++||||++++|+||
T Consensus 420 ~v~q~~~lf~~ti~~n~~--~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~il 492 (555)
T TIGR01194 420 AIFADFHLFDDLIGPDEG--EHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRPIL 492 (555)
T ss_pred EEccChhhhhhhhhcccc--cchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999999999999974 3578999999999999999999999999995 689999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHH-h-cCCcEEEEEecChhhhhhcCEEEEEeCCEEEEe
Q 000504 1367 VLDEATASIDTATDNVIQQTIRE-E-TSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEY 1423 (1458)
Q Consensus 1367 lLDEaTsslD~~Td~~Iq~~I~~-~-~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~ 1423 (1458)
|||||||+||++|++.|++.+.+ . .+++|+|+||||++++..||+|++|++|+++|.
T Consensus 493 ilDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 493 LFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999887643 2 368999999999999999999999999999975
No 42
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.8e-65 Score=644.50 Aligned_cols=449 Identities=27% Similarity=0.405 Sum_probs=342.1
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC-----CCCcEEEECC----
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG---- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g---- 659 (1458)
.++++|++++|+... ...+.+++ ||++++||+++|+||||||||||+++|+|.++| ++|++ .++|
T Consensus 5 ~l~~~~l~~~~~~~~----~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i-~~~g~~i~ 79 (529)
T PRK15134 5 LLAIENLSVAFRQQQ----TVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDI-RFHGESLL 79 (529)
T ss_pred eEEEeceEEEecCCC----CceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEE-EECCEecc
Confidence 489999999996320 12468999 999999999999999999999999999999986 68986 5543
Q ss_pred -------------EEEEEcCCCC--CC-CCcHHHHHhcCC----CCCH----HHHHHHHHHhhhhhhHHhhcCCCccccc
Q 000504 660 -------------KKAYVPQSSW--IQ-TGTIRENILFGK----DMRQ----SFYEEVLEGCALNQDIEMWADGDLSVVG 715 (1458)
Q Consensus 660 -------------~~ayv~Q~~~--i~-~~Ti~enI~fg~----~~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig 715 (1458)
.++|++|+|. +. ..|+++|+.++. .... ++.+++++.+++.+.. ....
T Consensus 80 ~~~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~ 151 (529)
T PRK15134 80 HASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLT 151 (529)
T ss_pred cCCHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHh
Confidence 4799999984 33 359999987431 1111 2233344444443210 0124
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEE
Q 000504 716 ERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVM 792 (1458)
Q Consensus 716 ~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l 792 (1458)
.+..+|||||||||+|||||+.+|+++||||||++||+.+...+.+ ++..+. .++|+|+||||++++.. ||+|++|
T Consensus 152 ~~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l 230 (529)
T PRK15134 152 DYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQ-LLRELQQELNMGLLFITHNLSIVRKLADRVAVM 230 (529)
T ss_pred hCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHH-HHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEE
Confidence 5678999999999999999999999999999999999999888776 454443 37999999999999875 9999999
Q ss_pred eCCeEEEcccchhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhc
Q 000504 793 KDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTEL 872 (1458)
Q Consensus 793 ~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 872 (1458)
++|++++.|+.+++..... ..
T Consensus 231 ~~G~i~~~g~~~~~~~~~~-------------------------------------~~---------------------- 251 (529)
T PRK15134 231 QNGRCVEQNRAATLFSAPT-------------------------------------HP---------------------- 251 (529)
T ss_pred ECCEEEEeCCHHHHhhCCC-------------------------------------CH----------------------
Confidence 9999998887655432000 00
Q ss_pred CcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 873 GRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLA 952 (1458)
Q Consensus 873 g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~ 952 (1458)
+....
T Consensus 252 ----------~~~~~----------------------------------------------------------------- 256 (529)
T PRK15134 252 ----------YTQKL----------------------------------------------------------------- 256 (529)
T ss_pred ----------HHHHH-----------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000504 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1458)
Q Consensus 953 ~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v 1032 (1458)
T Consensus 257 -------------------------------------------------------------------------------- 256 (529)
T PRK15134 257 -------------------------------------------------------------------------------- 256 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHH
Q 000504 1033 FLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEW 1112 (1458)
Q Consensus 1033 ~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1112 (1458)
+ +.
T Consensus 257 --------------~-------------------------------------------------~~-------------- 259 (529)
T PRK15134 257 --------------L-------------------------------------------------NS-------------- 259 (529)
T ss_pred --------------H-------------------------------------------------Hh--------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccc
Q 000504 1113 LCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLV 1192 (1458)
Q Consensus 1113 l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~ 1192 (1458)
.+ + .+...+
T Consensus 260 ----------------------~~-----------------------------------------~------~~~~~~-- 268 (529)
T PRK15134 260 ----------------------EP-----------------------------------------S------GDPVPL-- 268 (529)
T ss_pred ----------------------Cc-----------------------------------------c------cccccc--
Confidence 00 0 000000
Q ss_pred cCCCCCCCCCCCCccEEEEeeeEEeCC---------CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCC
Q 000504 1193 IKNSRPSPEWPSSGKIELENLLVQYNP---------TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSG 1263 (1458)
Q Consensus 1193 ~~~~~~~~~wp~~g~I~~~nvs~~Y~~---------~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~ 1263 (1458)
++ +....|+++|++++|.. +...+|+|+||+|++||++||+|+||||||||+++|.|++ |++
T Consensus 269 -----~~---~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~-~~~ 339 (529)
T PRK15134 269 -----PE---PASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI-NSQ 339 (529)
T ss_pred -----CC---CCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC-CCC
Confidence 00 01114899999999952 1246999999999999999999999999999999999998 489
Q ss_pred cEEEEcCeeCCCCCHHH---HhcceEEEccCC--CCccc-cHHHhcCcC---C--CCC----HHHHHHHHHHcCcH-HHH
Q 000504 1264 GRILIDGVDISMIGLQD---LRSRLSIIPQDP--MLFQG-TVRTNLDPL---E--QHS----DQEIWEVINKCHLA-EIV 1327 (1458)
Q Consensus 1264 G~I~IDG~dI~~i~l~~---LR~~i~iIpQdp--~LF~g-TIR~NLdp~---~--~~s----deeI~~aL~~~~L~-~~i 1327 (1458)
|+|.+||.++...+..+ +|++++|+||+| .+|.. |+++|+... . ..+ ++++.++++..++. +..
T Consensus 340 G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 419 (529)
T PRK15134 340 GEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPETR 419 (529)
T ss_pred cEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCHHHH
Confidence 99999999998776543 478899999998 36664 999999631 1 111 23466777777774 222
Q ss_pred HhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhh
Q 000504 1328 RQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPT 1405 (1458)
Q Consensus 1328 ~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~t 1405 (1458)
+.++ .+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.
T Consensus 420 -------~~~~----~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~ 488 (529)
T PRK15134 420 -------HRYP----AEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHV 488 (529)
T ss_pred -------hcCC----ccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHH
Confidence 2233 4699999999999999999999999999999999999999999999764 37899999999999
Q ss_pred hhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 000504 1406 VID-NDLVLVLDEGKVLEYDSPRQLLEDNS 1434 (1458)
Q Consensus 1406 i~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~ 1434 (1458)
+.. ||+|++|++|++++.|+++++++++.
T Consensus 489 ~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 518 (529)
T PRK15134 489 VRALCHQVIVLRQGEVVEQGDCERVFAAPQ 518 (529)
T ss_pred HHHhcCeEEEEECCEEEEEcCHHHHhcCCC
Confidence 875 99999999999999999999987554
No 43
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.3e-63 Score=644.68 Aligned_cols=535 Identities=16% Similarity=0.212 Sum_probs=436.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 267 QVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIG 346 (1458)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g 346 (1458)
+..++.+++.++...+..++..++..+.|++++.+++.+-.... ... .+.+++++++..++..++.....+...+++
T Consensus 146 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (710)
T TIGR03796 146 WRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR--QDW-LRPLLLGMGLTALLQGVLTWLQLYYLRRLQ 222 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667777778888888889999999999999987654322 111 333444555555666666666667788899
Q ss_pred HHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 000504 347 IRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1458)
Q Consensus 347 ~~iR~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl 422 (1458)
.++...+...+|+|.++++.. .+++|+++|.++.| +.+.+++. .+..+....+.+++.+++++. ++|+.+++.+
T Consensus 223 ~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~li~l 300 (710)
T TIGR03796 223 IKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLL-YDPVLTLIGI 300 (710)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 999999999999999998653 34999999999988 67887764 344455555555555555554 3436667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 423 FSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIA 502 (1458)
Q Consensus 423 ~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~ 502 (1458)
+.+++.+.+...+.+...+..++.++..+++.+.+.|.++|++.||.+++|+.+.++.++.+.++.+...+.....+...
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (710)
T TIGR03796 301 AFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILG 380 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777788888888899999999999999999999999999999999999999999888877776665554444333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 000504 503 FLFWASPT--LVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPIT 580 (1458)
Q Consensus 503 ~~~~~~p~--~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~ 580 (1458)
.+...... .+.+++++++.+.++.++.+.++++..++..+..|+..++..+..+.+++++++|+.++++.+++.+...
T Consensus 381 ~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~ 460 (710)
T TIGR03796 381 VLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEE 460 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 22222221 2334567778888899999999999999999999999999999999999999999999998765221111
Q ss_pred ------CCCC-CCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCC
Q 000504 581 ------EPTS-KASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISG 652 (1458)
Q Consensus 581 ------~~~~-~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G 652 (1458)
.... ......|+++|++|+|+++ ..+.|+| ||+|++||+++|+|+||||||||+++|+|+++|++|
T Consensus 461 ~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~------~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 534 (710)
T TIGR03796 461 EEAPAAGSEPSPRLSGYVELRNITFGYSPL------EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSG 534 (710)
T ss_pred ccccccccccCCCCCCeEEEEEEEEecCCC------CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 0101 1223579999999999864 3578999 999999999999999999999999999999999999
Q ss_pred cEEEECC-------------EEEEEcCCCCCCCCcHHHHHhcCC-CCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCC
Q 000504 653 AAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGK-DMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1458)
Q Consensus 653 ~~i~~~g-------------~~ayv~Q~~~i~~~Ti~enI~fg~-~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g 718 (1458)
++ .++| .++||||+|+++++||||||.++. +.+++++.++++.+++.++++.+|+|.+|.+||+|
T Consensus 535 ~I-~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G 613 (710)
T TIGR03796 535 EI-LFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGG 613 (710)
T ss_pred EE-EECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCC
Confidence 87 8876 479999999999999999999886 47888999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEE
Q 000504 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIE 798 (1458)
Q Consensus 719 ~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~ 798 (1458)
.+|||||||||+||||++++|+|+||||||||||+++++++++.+.. .++|+|+|||+++.+..||+|++|++|+|+
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~ 690 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVV 690 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999876543 489999999999999999999999999999
Q ss_pred EcccchhhhhhcchHHHHH
Q 000504 799 QSGKYEDLIADQNSELVRQ 817 (1458)
Q Consensus 799 ~~g~~~~l~~~~~~~~~~~ 817 (1458)
+.|+++|+++ .++.+.++
T Consensus 691 ~~G~~~~Ll~-~~~~y~~l 708 (710)
T TIGR03796 691 QRGTHEELWA-VGGAYARL 708 (710)
T ss_pred EecCHHHHHH-cCCcHHHH
Confidence 9999999987 45555543
No 44
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.2e-62 Score=637.49 Aligned_cols=537 Identities=20% Similarity=0.237 Sum_probs=431.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 265 LPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANR 344 (1458)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r 344 (1458)
+++..++.+++.++...++.++..++.++.|++++.+++.+-.... ... -+.+++++++..++..++.....+...+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (686)
T TIGR03797 126 LLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD--RSL-LVQIALALLAAAVGAAAFQLAQSLAVLR 202 (686)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566778888888889999999999999999999997653322 111 3334444555555566666666667788
Q ss_pred HHHHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 000504 345 IGIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLYI--HRIWLLPVQVFLALVILYKNLGAAPAF 419 (1458)
Q Consensus 345 ~g~~iR~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~~~--~~~w~~plqi~~al~lL~~~lG~~a~l 419 (1458)
++.++...+...+|+|.++++.. .+++|+++|.++ |++.+.+++... ..+...++ +++++++++.. +|+.++
T Consensus 203 ~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~-~~~l~l 279 (686)
T TIGR03797 203 LETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIF-ALLNLGLMFYY-SWKLAL 279 (686)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-HHHHHH
Confidence 89999999999999999988643 348999999997 899998876432 23333333 33444444433 336666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 420 AALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCS 499 (1458)
Q Consensus 420 ~gl~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a 499 (1458)
+.++++++.+++...+.+...+..++.++..+++.+...|.++|+++||.++.|+.+.++.++.-++..+...+......
T Consensus 280 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (686)
T TIGR03797 280 VAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIEN 359 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776667777788888889999999999999999999999999999999999999888887765555444444433333
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 000504 500 AIAFLFWASPTL--VSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKK 577 (1458)
Q Consensus 500 ~~~~~~~~~p~~--v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~ 577 (1458)
....+......+ +.++.++.+.+.++.++.+.++++..++..+..|+..++..+..+.+++++++|+.++++.+++.+
T Consensus 360 ~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 439 (686)
T TIGR03797 360 LLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVD 439 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 332222222222 233456777777889999999999999999999999999999999999999999999998765221
Q ss_pred CCCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEE
Q 000504 578 PITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIK 656 (1458)
Q Consensus 578 ~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~ 656 (1458)
.... ........|+++|++|+|+++ .++.|+| ||++++||+++|+|+||||||||+++|+|+++|++|++ .
T Consensus 440 ~~~~-~~~~~~~~I~~~nvsf~Y~~~------~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I-~ 511 (686)
T TIGR03797 440 EAKT-DPGKLSGAIEVDRVTFRYRPD------GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSV-F 511 (686)
T ss_pred cCcC-CCCCCCceEEEEEEEEEcCCC------CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEE-E
Confidence 1111 111123469999999999753 3578999 99999999999999999999999999999999999997 8
Q ss_pred ECC-------------EEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCCh
Q 000504 657 VHG-------------KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1458)
Q Consensus 657 ~~g-------------~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSG 723 (1458)
++| .++||||+|+++++||+|||.+|++.++++..++++.|+++++++.+|+|.+|.+||+|.+|||
T Consensus 512 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSG 591 (686)
T TIGR03797 512 YDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSG 591 (686)
T ss_pred ECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCH
Confidence 887 3799999999999999999999998888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccc
Q 000504 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKY 803 (1458)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~ 803 (1458)
|||||++||||++++|+|++||||||+||+++++++.+.+ +.. ++|+|+|||+++.++.||+|++|++|+|++.|++
T Consensus 592 GQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L-~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~ 668 (686)
T TIGR03797 592 GQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESL-ERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTY 668 (686)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999887754 433 6899999999999999999999999999999999
Q ss_pred hhhhhhcchHHHHHHH
Q 000504 804 EDLIADQNSELVRQMK 819 (1458)
Q Consensus 804 ~~l~~~~~~~~~~~~~ 819 (1458)
+|+++ .++.+.++..
T Consensus 669 ~~Ll~-~~~~y~~l~~ 683 (686)
T TIGR03797 669 DELMA-REGLFAQLAR 683 (686)
T ss_pred HHHHh-CCcHHHHHHH
Confidence 99987 5666666553
No 45
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.4e-62 Score=637.71 Aligned_cols=530 Identities=22% Similarity=0.315 Sum_probs=433.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 265 LPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANR 344 (1458)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r 344 (1458)
.++..++.+++.+....++.++..++.++.|++++.+++.+-.... ... .+.+++++++..++..++.....+...+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA--FET-LWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc--HhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667788888888888888899999999999999997653322 111 2333444444445555555555566778
Q ss_pred HHHHHHHHHHHHHHHHhcccccC--CCCHHHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000504 345 IGIRVRSALTVLIYKRSMAIKFA--GPSSGIIINMINVDVERIGDFFLY--IHRIWLLPVQVFLALVILYKNLGAAPAFA 420 (1458)
Q Consensus 345 ~g~~iR~~L~~~Iy~K~L~ls~~--~~~~G~ivnlms~D~~ri~~~~~~--~~~~w~~plqi~~al~lL~~~lG~~a~l~ 420 (1458)
++.++...+...+|+|.++++.. .+++|++++.+ .|++.+.+++.. +..+...++-+ +.+++++. +.|+.+++
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~-~~~~l~li 290 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEARPASVGSFANQL-REFESVRDFFTSATLTALIDLPFAL-LFLLVIAI-IGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHH-HHHHHHHH-HHhHHHHH
Confidence 88899999999999999988654 33899999999 799999987653 23333444433 33344443 33366777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 421 ALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSA 500 (1458)
Q Consensus 421 gl~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~ 500 (1458)
.++++++.+++...+.+..++..++.++..+++.+.+.|.++|++.||.+++|+.+.++.++..++..+...+.....+.
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777788888899999999999999999999999999999999999999999999988887777766665555444
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-CC
Q 000504 501 IAFLFWASPT--LVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQ-KK 577 (1458)
Q Consensus 501 ~~~~~~~~p~--~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~-~~ 577 (1458)
...+...... .+.+++++++.+.++.++.+.+++++.++..+..|+..++..+..+.+++++++|+.++++.+++ ++
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 3333222222 23345677888888899999999999999999999999999999999999999999999987652 21
Q ss_pred CCCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEE
Q 000504 578 PITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIK 656 (1458)
Q Consensus 578 ~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~ 656 (1458)
.....+.......|+++|++|+|+.+ ..+.|+| |++|++||+++|+|+||||||||+++|+|+++|++|++ .
T Consensus 451 ~~~~~~~~~~~~~I~~~~vsf~Y~~~------~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I-~ 523 (694)
T TIGR03375 451 GTRFLHRPRLQGEIEFRNVSFAYPGQ------ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSV-L 523 (694)
T ss_pred CCCCCCCCCccceEEEEEEEEEeCCC------CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-E
Confidence 11111111223469999999999753 3578999 99999999999999999999999999999999999987 8
Q ss_pred ECC-------------EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCC
Q 000504 657 VHG-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1458)
Q Consensus 657 ~~g-------------~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LS 722 (1458)
++| .++||+|+|++|++||+|||.++++ .+++++.++++.+++.++++.+|+|.+|.+||+|.+||
T Consensus 524 idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LS 603 (694)
T TIGR03375 524 LDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLS 603 (694)
T ss_pred ECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCC
Confidence 887 4799999999999999999999986 78899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEccc
Q 000504 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~ 802 (1458)
||||||++||||++++|++++||||||+||+++++++.+ .+....+++|+|+|||+++.+..||+|++|++|++++.|+
T Consensus 604 gGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~-~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~ 682 (694)
T TIGR03375 604 GGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKD-RLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGP 682 (694)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCC
Confidence 999999999999999999999999999999999888876 4666667999999999999999999999999999999999
Q ss_pred chhhhh
Q 000504 803 YEDLIA 808 (1458)
Q Consensus 803 ~~~l~~ 808 (1458)
++|+++
T Consensus 683 ~~eLl~ 688 (694)
T TIGR03375 683 KDQVLE 688 (694)
T ss_pred HHHHHH
Confidence 999876
No 46
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.6e-62 Score=635.82 Aligned_cols=531 Identities=20% Similarity=0.268 Sum_probs=408.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 270 IHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSY-HYGLVLASVFLFAKTVESLTQRQWYFGANRIGIR 348 (1458)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~-~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~ 348 (1458)
++.+|+.++...++.++..++..+.|+++..+++.+....+.... ...++++++.++..++..+....+.+...++..+
T Consensus 156 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 235 (711)
T TIGR00958 156 SGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLR 235 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445567777888888999999999999999999988643320111 1011122222222233333333344445555556
Q ss_pred HHHHHHHHHHHHhccccc---CCCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000504 349 VRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFS 424 (1458)
Q Consensus 349 iR~~L~~~Iy~K~L~ls~---~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~ 424 (1458)
+|. .+|+|.++... ....+|+++|.++.|++.+.+++. .++.++...+++++++++++. ++|..+++.++.
T Consensus 236 lr~----~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~-~s~~l~l~~l~~ 310 (711)
T TIGR00958 236 IRE----DLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLW-LSPRLTMVTLIN 310 (711)
T ss_pred HHH----HHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHH
Confidence 655 55666655533 234899999999999999988764 456666666777776666664 344556666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 425 TIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFL 504 (1458)
Q Consensus 425 ~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~ 504 (1458)
+++...+...+.+..++..++.++..++......|.++|+++||.|++|+.+.++.++..++-.+..++.....+....+
T Consensus 311 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (711)
T TIGR00958 311 LPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWT 390 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677778888888888888999999999999999999999999999877766665443333222222222221111
Q ss_pred HHHH--HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 000504 505 FWAS--PTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEP 582 (1458)
Q Consensus 505 ~~~~--p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 582 (1458)
.... -..+.++.++.+.+.++.++.+.+++++.++..+..|+..++..+..+.+++++.+||.+|++.+++.+.....
T Consensus 391 ~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~ 470 (711)
T TIGR00958 391 TSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTL 470 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 1111 12233455677777888999999999999999999999999999999999999999999999876522211111
Q ss_pred CCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--
Q 000504 583 TSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-- 659 (1458)
Q Consensus 583 ~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-- 659 (1458)
...+....|+++|++|+|+++ ++.+.|+| |+++++||+++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 471 ~~~~~~~~I~~~nVsf~Y~~~-----~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I-~idg~~ 544 (711)
T TIGR00958 471 APLNLEGLIEFQDVSFSYPNR-----PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQV-LLDGVP 544 (711)
T ss_pred CCCCCCCeEEEEEEEEECCCC-----CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE-EECCEE
Confidence 111223469999999999854 33579999 99999999999999999999999999999999999987 8887
Q ss_pred -----------EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHH
Q 000504 660 -----------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1458)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 727 (1458)
.++||+|+|+++++||||||.+|.+ .++++..++++.++++++++.+|+|.+|.+||+|.+|||||||
T Consensus 545 i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQ 624 (711)
T TIGR00958 545 LVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQ 624 (711)
T ss_pred HHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHH
Confidence 4799999999999999999999965 5678889999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhh
Q 000504 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLI 807 (1458)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~ 807 (1458)
|++||||++++|+|+|||||||+||+++.+.+.+ ....+++|+|+|||+++.+..||+|++|++|+|++.|+++|++
T Consensus 625 RlalARALl~~p~ILILDEpTSaLD~~te~~i~~---~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~ 701 (711)
T TIGR00958 625 RIAIARALVRKPRVLILDEATSALDAECEQLLQE---SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLM 701 (711)
T ss_pred HHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH---hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHH
Confidence 9999999999999999999999999999888776 2234689999999999999999999999999999999999998
Q ss_pred hhcchHHH
Q 000504 808 ADQNSELV 815 (1458)
Q Consensus 808 ~~~~~~~~ 815 (1458)
+ .++.+.
T Consensus 702 ~-~~~~y~ 708 (711)
T TIGR00958 702 E-DQGCYK 708 (711)
T ss_pred h-CCCchH
Confidence 7 444443
No 47
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.2e-62 Score=616.45 Aligned_cols=541 Identities=23% Similarity=0.279 Sum_probs=445.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 264 SLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGAN 343 (1458)
Q Consensus 264 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~ 343 (1458)
+-++..++-+|+.+.-..+..++..++.++.|++.+.++|.+--..+ ...=+++++++.+..+.+.+....-.|...
T Consensus 143 ~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~---~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 143 SWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS---RSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred HhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666778878777888888899999999999999998754432 222445666677777777777666667788
Q ss_pred HHHHHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHhhhHHH
Q 000504 344 RIGIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLYI-HRI-WLLPVQVFLALVILYKNLGAAPA 418 (1458)
Q Consensus 344 r~g~~iR~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~~~-~~~-w~~plqi~~al~lL~~~lG~~a~ 418 (1458)
.++.|+...+...+|++.|+++.. .|++|++++.++ |.++|.++...- ..+ .-.|+ .++.+.+++..=+ +.+
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~-~~i~l~vm~~ys~-~L~ 296 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLF-ALIFLAVMFLYSW-KLT 296 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHH
Confidence 899999999999999999998764 459999999987 899999987532 222 22222 2333334443334 778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 419 FAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTC 498 (1458)
Q Consensus 419 l~gl~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~ 498 (1458)
+++++.+++.+.+..++.+..++.-++.++..-++-+...|.++||++||..+-|+.+..+.++.=.+..+.-.+.....
T Consensus 297 li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~ 376 (709)
T COG2274 297 LIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLA 376 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 88888888888888999999999999999999999999999999999999999999999999887666666655555444
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000504 499 SAIAFLFWASPT--LVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQK 576 (1458)
Q Consensus 499 a~~~~~~~~~p~--~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~ 576 (1458)
..........+. -+.+++||++.++++.+|.|..+++..+...+..|+..+.+....+.+++++.+|+.+.++.|.+.
T Consensus 377 ~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~ 456 (709)
T COG2274 377 LILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQ 456 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 443333222222 244678999999999999999999999999999999999999999999999999999999887632
Q ss_pred CCCC-CCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcE
Q 000504 577 KPIT-EPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAA 654 (1458)
Q Consensus 577 ~~~~-~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~ 654 (1458)
+... .......+..|+++|++|.|+.+ +.+.|+| |++|++||++||+|+||||||||+|.|+|.++|.+|++
T Consensus 457 ~~~~~~~~~~~~~g~I~~~nvsf~y~~~------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I 530 (709)
T COG2274 457 EGDKTLIHLPKLQGEIEFENVSFRYGPD------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRI 530 (709)
T ss_pred ccccccccccccCceEEEEEEEEEeCCC------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 2211 11223345689999999999876 3479999 99999999999999999999999999999999999997
Q ss_pred EEECC-------------EEEEEcCCCCCCCCcHHHHHhcCCCCCH-HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 655 IKVHG-------------KKAYVPQSSWIQTGTIRENILFGKDMRQ-SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 655 i~~~g-------------~~ayv~Q~~~i~~~Ti~enI~fg~~~~~-~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++| .++||+|++.+|+|||+|||.+|.|... +...++++..+.++++..+|.|.+|.+||+|.+
T Consensus 531 -~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~ 609 (709)
T COG2274 531 -LLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGAN 609 (709)
T ss_pred -EECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCC
Confidence 8888 4799999999999999999999998655 555555666678899999999999999999999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEc
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQS 800 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~ 800 (1458)
||||||||++||||++++|+|+||||||||||+++.+.+.++ +.....++|+|+|||+++.+..||+|+||++|+|+++
T Consensus 610 LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~-L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~ 688 (709)
T COG2274 610 LSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQN-LLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQ 688 (709)
T ss_pred CCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHH-HHHHhcCCeEEEEEccchHhhhccEEEEccCCceecc
Confidence 999999999999999999999999999999999998888775 5666788999999999999999999999999999999
Q ss_pred ccchhhhhhcchHHHHHHH
Q 000504 801 GKYEDLIADQNSELVRQMK 819 (1458)
Q Consensus 801 g~~~~l~~~~~~~~~~~~~ 819 (1458)
|+++|+++ .++.+.++..
T Consensus 689 gs~~ell~-~~g~y~~l~~ 706 (709)
T COG2274 689 GSHEELLA-QGGLYARLYQ 706 (709)
T ss_pred CCHHHHHH-hcChHHHHHh
Confidence 99999998 4666665543
No 48
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.2e-64 Score=684.25 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=203.1
Q ss_pred HHHHHHHHhhhHHHHHHHHh--cCCCCCccccCCCCCCCCCCCCc--cEEEEeeeEEeC--CCCCcceeeeeEEeeCCcE
Q 000504 1164 WNLCNVENKMISVERILQFT--NIPSEAPLVIKNSRPSPEWPSSG--KIELENLLVQYN--PTLPMVLKGITCTFPGEKK 1237 (1458)
Q Consensus 1164 ~~~~~le~~~~sveRi~~~~--~~~~E~~~~~~~~~~~~~wp~~g--~I~~~nvs~~Y~--~~~~~vL~~is~~I~~Gek 1237 (1458)
+...+.|+++.++||..+|. +.+.|.+.......++. ..| .++++||+++|+ ++.+.+|+|||++++|||+
T Consensus 715 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~ 791 (1394)
T TIGR00956 715 KAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTL 791 (1394)
T ss_pred hcccccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEE
Confidence 33456777888999998873 34444432222211221 134 379999999985 3345799999999999999
Q ss_pred EEEECCCCCCHHHHHHHHhccCC---CCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCC-ccccHHHhcCcC------C
Q 000504 1238 IGVVGRTGSGKSTLIQALFRVVE---PSGGRILIDGVDISMIGLQDLRSRLSIIPQDPML-FQGTVRTNLDPL------E 1307 (1458)
Q Consensus 1238 vgIVGrTGSGKSTLl~~L~rl~~---p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~L-F~gTIR~NLdp~------~ 1307 (1458)
+||+||||||||||+++|.|+.+ |++|+|.+||.++. .++|++++||||++.+ +..||||||+.. .
T Consensus 792 ~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~ 867 (1394)
T TIGR00956 792 TALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPK 867 (1394)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCC
Confidence 99999999999999999999998 78899999999985 3578999999998764 566999999731 1
Q ss_pred CCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCC-EEEEeCcCCCCCHHHHHH
Q 000504 1308 QHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR-ILVLDEATASIDTATDNV 1382 (1458)
Q Consensus 1308 ~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~-ILlLDEaTsslD~~Td~~ 1382 (1458)
+.+++ .+.++++..++.+ ..|+.+++.|.+||||||||++|||||+++|+ ||+||||||+||+.+...
T Consensus 868 ~~~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~ 940 (1394)
T TIGR00956 868 SVSKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWS 940 (1394)
T ss_pred CCCHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHH
Confidence 23443 3567777777754 36889998888999999999999999999997 999999999999999999
Q ss_pred HHHHHHHh-cCCcEEEEEecChhhh--hhcCEEEEEeCC-EEEEecChh
Q 000504 1383 IQQTIREE-TSRCTVITVAHRIPTV--IDNDLVLVLDEG-KVLEYDSPR 1427 (1458)
Q Consensus 1383 Iq~~I~~~-~~~~TVI~IAHrl~ti--~~~DrVlvL~~G-~ivE~g~p~ 1427 (1458)
|++.|++. .+++|||+++|++++. ..||+|++|++| +++++|++.
T Consensus 941 i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~ 989 (1394)
T TIGR00956 941 ICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLG 989 (1394)
T ss_pred HHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcc
Confidence 99999986 4689999999999974 469999999997 999999874
No 49
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-65 Score=636.88 Aligned_cols=442 Identities=22% Similarity=0.349 Sum_probs=335.4
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC--CCCcEEEECC-------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR--ISGAAIKVHG------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~--~~G~~i~~~g------- 659 (1458)
.++++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|.++| ++|++ .++|
T Consensus 5 ~l~~~nl~~~~~~--------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i-~~~g~~~~~~~ 75 (506)
T PRK13549 5 LLEMKNITKTFGG--------VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEI-IFEGEELQASN 75 (506)
T ss_pred eEEEeeeEEEeCC--------eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEE-EECCEECCCCC
Confidence 5899999999953 368999 999999999999999999999999999999986 79987 6665
Q ss_pred -------EEEEEcCCCCCCC-CcHHHHHhcCCCC------CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 -------KKAYVPQSSWIQT-GTIRENILFGKDM------RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 -------~~ayv~Q~~~i~~-~Ti~enI~fg~~~------~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
.++|++|++.++. .|++||+.++... +.+..++.++ +-++.+. -.........+|||||
T Consensus 76 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~~--l~~~~~~~~~~LSgGq 148 (506)
T PRK13549 76 IRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQ-----KLLAQLK--LDINPATPVGNLGLGQ 148 (506)
T ss_pred HHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHH-----HHHHHcC--CCCCcccchhhCCHHH
Confidence 2799999987654 6999999987532 1111111111 1112221 1112345677999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccc
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKY 803 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~ 803 (1458)
||||+||||+..+|+++||||||++||+.....+.+ ++..+ .+++|+|++|||++++.. ||+|++|++|+++..|+.
T Consensus 149 kqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~ 227 (506)
T PRK13549 149 QQLVEIAKALNKQARLLILDEPTASLTESETAVLLD-IIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPA 227 (506)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeeccc
Confidence 999999999999999999999999999999888776 45444 357899999999999875 999999999999877654
Q ss_pred hhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhcCcchHHHHHHH
Q 000504 804 EDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYSAF 883 (1458)
Q Consensus 804 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y 883 (1458)
+++... + ..
T Consensus 228 ~~~~~~---~---~~----------------------------------------------------------------- 236 (506)
T PRK13549 228 AGMTED---D---II----------------------------------------------------------------- 236 (506)
T ss_pred ccCCHH---H---HH-----------------------------------------------------------------
Confidence 332110 0 00
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 884 ITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLF 963 (1458)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~ 963 (1458)
...
T Consensus 237 -~~~---------------------------------------------------------------------------- 239 (506)
T PRK13549 237 -TMM---------------------------------------------------------------------------- 239 (506)
T ss_pred -HHh----------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000504 964 LNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWY 1043 (1458)
Q Consensus 964 ~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~ 1043 (1458)
T Consensus 240 -------------------------------------------------------------------------------- 239 (506)
T PRK13549 240 -------------------------------------------------------------------------------- 239 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHH
Q 000504 1044 QAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNF 1123 (1458)
Q Consensus 1044 ~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~ 1123 (1458)
+ +
T Consensus 240 ---~-----------------------------------~---------------------------------------- 241 (506)
T PRK13549 240 ---V-----------------------------------G---------------------------------------- 241 (506)
T ss_pred ---h-----------------------------------C----------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCC
Q 000504 1124 AFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWP 1203 (1458)
Q Consensus 1124 ~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp 1203 (1458)
. .. .+ ..|.++ ++ +
T Consensus 242 -------------~-~~------------------------------------~~-----~~~~~~--------~~---~ 255 (506)
T PRK13549 242 -------------R-EL------------------------------------TA-----LYPREP--------HT---I 255 (506)
T ss_pred -------------c-Cc------------------------------------cc-----cccccc--------cC---C
Confidence 0 00 00 000000 00 1
Q ss_pred CCccEEEEeeeEEeCC-CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-CCCcEEEEcCeeCCCCCH-HH
Q 000504 1204 SSGKIELENLLVQYNP-TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-PSGGRILIDGVDISMIGL-QD 1280 (1458)
Q Consensus 1204 ~~g~I~~~nvs~~Y~~-~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-p~~G~I~IDG~dI~~i~l-~~ 1280 (1458)
....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+. +.
T Consensus 256 ~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~ 335 (506)
T PRK13549 256 GEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQA 335 (506)
T ss_pred CCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHH
Confidence 1124899999999952 22359999999999999999999999999999999999998 599999999999875543 45
Q ss_pred HhcceEEEccCC---CCcc-ccHHHhcCcC--CC------CCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCC
Q 000504 1281 LRSRLSIIPQDP---MLFQ-GTVRTNLDPL--EQ------HSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGEN 1344 (1458)
Q Consensus 1281 LR~~i~iIpQdp---~LF~-gTIR~NLdp~--~~------~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1344 (1458)
.|.+++|+||+| .+|. -|+.+|+... .. .+. +++.++++.+++.+ ...|.++ ..
T Consensus 336 ~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~ 405 (506)
T PRK13549 336 IAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKT------ASPELAI----AR 405 (506)
T ss_pred HHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccC------CCccccc----cc
Confidence 678899999997 3665 5999999631 11 111 23556666665521 1123334 46
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000504 1345 WSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLE 1422 (1458)
Q Consensus 1345 LSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE 1422 (1458)
||||||||++||||++++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||++++|++|+++.
T Consensus 406 LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~ 485 (506)
T PRK13549 406 LSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKG 485 (506)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998753 47899999999999866 99999999999999
Q ss_pred ecChhHHh
Q 000504 1423 YDSPRQLL 1430 (1458)
Q Consensus 1423 ~g~p~~Ll 1430 (1458)
.|+++++.
T Consensus 486 ~~~~~~~~ 493 (506)
T PRK13549 486 DLINHNLT 493 (506)
T ss_pred EeccccCC
Confidence 99988764
No 50
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-65 Score=637.04 Aligned_cols=436 Identities=21% Similarity=0.313 Sum_probs=333.1
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|.+++|+. .+.+++ ||++++||+++|+||||||||||+++|+|..+|++|++ .++|
T Consensus 5 ~l~~~~l~~~~~~--------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i-~~~g~~i~~~~~~ 75 (510)
T PRK09700 5 YISMAGIGKSFGP--------VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTI-TINNINYNKLDHK 75 (510)
T ss_pred eEEEeeeEEEcCC--------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEE-EECCEECCCCCHH
Confidence 4899999999953 357899 99999999999999999999999999999999999987 6665
Q ss_pred -----EEEEEcCCCCCCC-CcHHHHHhcCCCC----------CHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCC
Q 000504 660 -----KKAYVPQSSWIQT-GTIRENILFGKDM----------RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1458)
Q Consensus 660 -----~~ayv~Q~~~i~~-~Ti~enI~fg~~~----------~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~ 719 (1458)
.++|++|++.++. .|++||+.++... +.. +.+++++.+++. ...+....
T Consensus 76 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~ 144 (510)
T PRK09700 76 LAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLK-----------VDLDEKVA 144 (510)
T ss_pred HHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCC-----------CCcccchh
Confidence 3799999987654 5999999886421 111 112222222221 12345667
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeE
Q 000504 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1458)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i 797 (1458)
+|||||||||+||||++.+|+++||||||++||+.+...+.+ .+..+ .+++|+|+|||+++++.. ||+|++|++|++
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i 223 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFL-IMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSS 223 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999888776 44443 347999999999999875 999999999999
Q ss_pred EEcccchhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhcCcchH
Q 000504 798 EQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKW 877 (1458)
Q Consensus 798 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~ 877 (1458)
++.|+++++... +... .
T Consensus 224 ~~~g~~~~~~~~------~~~~------------------------------~--------------------------- 240 (510)
T PRK09700 224 VCSGMVSDVSND------DIVR------------------------------L--------------------------- 240 (510)
T ss_pred eeecchhhCCHH------HHHH------------------------------H---------------------------
Confidence 988776554320 0000 0
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 878 TVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIK 957 (1458)
Q Consensus 878 ~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~ 957 (1458)
..+.
T Consensus 241 ---------~~~~------------------------------------------------------------------- 244 (510)
T PRK09700 241 ---------MVGR------------------------------------------------------------------- 244 (510)
T ss_pred ---------hcCC-------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000504 958 TAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVIL 1037 (1458)
Q Consensus 958 ~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~ 1037 (1458)
+
T Consensus 245 ----------------~--------------------------------------------------------------- 245 (510)
T PRK09700 245 ----------------E--------------------------------------------------------------- 245 (510)
T ss_pred ----------------C---------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHH
Q 000504 1038 GISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRI 1117 (1458)
Q Consensus 1038 ~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1117 (1458)
T Consensus 246 -------------------------------------------------------------------------------- 245 (510)
T PRK09700 246 -------------------------------------------------------------------------------- 245 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCC
Q 000504 1118 NLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSR 1197 (1458)
Q Consensus 1118 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~ 1197 (1458)
.. .+ + +...+ ...
T Consensus 246 ----------------------~~-----------------------------------~~---~---~~~~~----~~~ 258 (510)
T PRK09700 246 ----------------------LQ-----------------------------------NR---F---NAMKE----NVS 258 (510)
T ss_pred ----------------------cc-----------------------------------cc---c---ccccc----ccc
Confidence 00 00 0 00000 000
Q ss_pred CCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC
Q 000504 1198 PSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG 1277 (1458)
Q Consensus 1198 ~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~ 1277 (1458)
++ +....|+++|+++.|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+
T Consensus 259 ~~---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~ 331 (510)
T PRK09700 259 NL---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRS 331 (510)
T ss_pred cC---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCC
Confidence 00 0112599999998763 2899999999999999999999999999999999999999999999999987654
Q ss_pred H-HHHhcceEEEccCC---CCccc-cHHHhcCcCCC------------CC----HHHHHHHHHHcCcHHHHHhcccccCc
Q 000504 1278 L-QDLRSRLSIIPQDP---MLFQG-TVRTNLDPLEQ------------HS----DQEIWEVINKCHLAEIVRQDQRLLDA 1336 (1458)
Q Consensus 1278 l-~~LR~~i~iIpQdp---~LF~g-TIR~NLdp~~~------------~s----deeI~~aL~~~~L~~~i~~lp~gLdt 1336 (1458)
. ..+|++++|+||++ .+|.+ |+++|+..... .. .+++.++++..++. ++..+.
T Consensus 332 ~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~~ 405 (510)
T PRK09700 332 PLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALK------CHSVNQ 405 (510)
T ss_pred HHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCC------CCCccC
Confidence 3 45788999999984 57765 99999864211 01 12345556665542 022344
Q ss_pred cccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEE
Q 000504 1337 PVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLV 1414 (1458)
Q Consensus 1337 ~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlv 1414 (1458)
++ ..||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. ++.|||+|||+++.+.. ||+|++
T Consensus 406 ~~----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~ 481 (510)
T PRK09700 406 NI----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAV 481 (510)
T ss_pred cc----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEE
Confidence 44 4599999999999999999999999999999999999999999998753 47899999999998865 999999
Q ss_pred EeCCEEEEecChhH
Q 000504 1415 LDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1415 L~~G~ivE~g~p~~ 1428 (1458)
|++|++++.+++.+
T Consensus 482 l~~G~i~~~~~~~~ 495 (510)
T PRK09700 482 FCEGRLTQILTNRD 495 (510)
T ss_pred EECCEEEEEecCcc
Confidence 99999999887633
No 51
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.4e-64 Score=635.56 Aligned_cols=219 Identities=26% Similarity=0.428 Sum_probs=179.0
Q ss_pred cEEEEeeeEEeCC---CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEc-Ce---eCCCCC--
Q 000504 1207 KIELENLLVQYNP---TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILID-GV---DISMIG-- 1277 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~---~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ID-G~---dI~~i~-- 1277 (1458)
.++++|++++|.. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |. ++...+
T Consensus 279 ~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~ 358 (520)
T TIGR03269 279 IIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPD 358 (520)
T ss_pred eEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchh
Confidence 5999999999953 22469999999999999999999999999999999999999999999996 64 344332
Q ss_pred -HHHHhcceEEEccCCCCccc-cHHHhcCc-CC-CC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000504 1278 -LQDLRSRLSIIPQDPMLFQG-TVRTNLDP-LE-QH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1278 -l~~LR~~i~iIpQdp~LF~g-TIR~NLdp-~~-~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
...+|++++|+||++.+|.. |+++|+.. .. .. .++++.++++.+++.+.- .++-++.++ ..|||||
T Consensus 359 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--~~~~~~~~~----~~LSgGq 432 (520)
T TIGR03269 359 GRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEK--AEEILDKYP----DELSEGE 432 (520)
T ss_pred hHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCcc--chhhhhCCh----hhCCHHH
Confidence 23567889999999988875 99999952 11 11 123466677777764210 000123344 4699999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSP 1426 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p 1426 (1458)
|||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||+|++|++|++++.|+|
T Consensus 433 ~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~ 512 (520)
T TIGR03269 433 RHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDP 512 (520)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999998764 36899999999999876 999999999999999999
Q ss_pred hHHhh
Q 000504 1427 RQLLE 1431 (1458)
Q Consensus 1427 ~~Ll~ 1431 (1458)
+++.+
T Consensus 513 ~~~~~ 517 (520)
T TIGR03269 513 EEIVE 517 (520)
T ss_pred HHHHh
Confidence 88764
No 52
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-64 Score=631.11 Aligned_cols=201 Identities=18% Similarity=0.321 Sum_probs=173.4
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
..|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +.++
T Consensus 318 ~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 384 (530)
T PRK15064 318 NALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANI 384 (530)
T ss_pred ceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEE
Confidence 36999999999964 3599999999999999999999999999999999999999999999998 3579
Q ss_pred EEEccCCC--Ccc-ccHHHhcCcCC--CCCHHHHHHHHHHcCcH-HHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1286 SIIPQDPM--LFQ-GTVRTNLDPLE--QHSDQEIWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1286 ~iIpQdp~--LF~-gTIR~NLdp~~--~~sdeeI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+|+||++. ++. .|+++|+..+. ...++++.++|+..++. +. .|.++ ..||||||||++||||+
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~----~~LSgGq~qrv~la~al 453 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDD-------IKKSV----KVLSGGEKGRMLFGKLM 453 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhH-------hcCcc----cccCHHHHHHHHHHHHH
Confidence 99999984 443 59999986432 23456678888888873 32 23333 46999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEE-EecChhHHhhc
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVL-EYDSPRQLLED 1432 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~iv-E~g~p~~Ll~~ 1432 (1458)
+++|+||||||||++||+.+...+.+.|++. ++|||+|||+++.+.. ||+|++|++|+++ +.|++.++++.
T Consensus 454 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 454 MQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 9999999999999999999999999999875 4699999999999876 9999999999998 77999988754
No 53
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.6e-64 Score=628.56 Aligned_cols=431 Identities=23% Similarity=0.364 Sum_probs=331.4
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|.+++|+. .+.+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 4 ~i~~~~l~~~~~~--------~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i-~~~g~~~~~~~~~ 74 (501)
T PRK10762 4 LLQLKGIDKAFPG--------VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSI-LYLGKEVTFNGPK 74 (501)
T ss_pred eEEEeeeEEEeCC--------eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEECCCCCHH
Confidence 4889999999953 357999 99999999999999999999999999999999999987 6665
Q ss_pred -----EEEEEcCCCCCC-CCcHHHHHhcCCCC-------CHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCC
Q 000504 660 -----KKAYVPQSSWIQ-TGTIRENILFGKDM-------RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1458)
Q Consensus 660 -----~~ayv~Q~~~i~-~~Ti~enI~fg~~~-------~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LS 722 (1458)
.++|++|++.++ ..|++||+.++... +.. +.+++++.+++. ........+||
T Consensus 75 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS 143 (501)
T PRK10762 75 SSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLR-----------FSSDKLVGELS 143 (501)
T ss_pred HHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCC-----------CCccCchhhCC
Confidence 379999998665 46999999987432 111 112222222221 11245667999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeEEEc
Q 000504 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQS 800 (1458)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~ 800 (1458)
||||||++||||+..+|+++||||||++||+.+...+.+ .+..+ ..++|+|++|||++++.. ||+|++|++|+++..
T Consensus 144 gG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~ 222 (501)
T PRK10762 144 IGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFR-VIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEe
Confidence 999999999999999999999999999999999888765 44443 347899999999999865 999999999999876
Q ss_pred ccchhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhcCcchHHHH
Q 000504 801 GKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVY 880 (1458)
Q Consensus 801 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 880 (1458)
|+.+++..+ + .. +
T Consensus 223 ~~~~~~~~~---~---~~-------------------------------~------------------------------ 235 (501)
T PRK10762 223 REVADLTED---S---LI-------------------------------E------------------------------ 235 (501)
T ss_pred cCcCcCCHH---H---HH-------------------------------H------------------------------
Confidence 654332110 0 00 0
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 881 SAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQ 960 (1458)
Q Consensus 881 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~ 960 (1458)
.. +.
T Consensus 236 -----~~-----------------------------~~------------------------------------------ 239 (501)
T PRK10762 236 -----MM-----------------------------VG------------------------------------------ 239 (501)
T ss_pred -----Hh-----------------------------cC------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000504 961 RLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGIS 1040 (1458)
Q Consensus 961 ~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~ 1040 (1458)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T PRK10762 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHH
Q 000504 1041 IWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLL 1120 (1458)
Q Consensus 1041 ~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l 1120 (1458)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T PRK10762 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCC
Q 000504 1121 FNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSP 1200 (1458)
Q Consensus 1121 ~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~ 1200 (1458)
. +.. ..++..+ ++
T Consensus 240 ----------------~----------------------------------------~~~---~~~~~~~-------~~- 252 (501)
T PRK10762 240 ----------------R----------------------------------------KLE---DQYPRLD-------KA- 252 (501)
T ss_pred ----------------C----------------------------------------Ccc---ccccccc-------cC-
Confidence 0 000 0000000 00
Q ss_pred CCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCH-H
Q 000504 1201 EWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL-Q 1279 (1458)
Q Consensus 1201 ~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l-~ 1279 (1458)
|..-.|+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +
T Consensus 253 --~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~ 323 (501)
T PRK10762 253 --PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQD 323 (501)
T ss_pred --CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHH
Confidence 1112489999984 27999999999999999999999999999999999999999999999999987665 3
Q ss_pred HHhcceEEEccCC---CCcc-ccHHHhcCcCC-----C----CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCC
Q 000504 1280 DLRSRLSIIPQDP---MLFQ-GTVRTNLDPLE-----Q----HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDG 1342 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp---~LF~-gTIR~NLdp~~-----~----~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1342 (1458)
.+|++++|+||+| .+|. -|+++|+.... . .+ ++++.++++.+++.+ ...|.++
T Consensus 324 ~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~---- 393 (501)
T PRK10762 324 GLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKT------PSMEQAI---- 393 (501)
T ss_pred HHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCC------CCccCch----
Confidence 4678899999997 3554 59999996310 0 11 223555666665520 1233444
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000504 1343 ENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1420 (1458)
Q Consensus 1343 ~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~i 1420 (1458)
..||||||||++|||||+.+|+||+|||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++
T Consensus 394 ~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i 473 (501)
T PRK10762 394 GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRI 473 (501)
T ss_pred hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEE
Confidence 4699999999999999999999999999999999999999999999864 47899999999999865 999999999999
Q ss_pred EEecChhHHh
Q 000504 1421 LEYDSPRQLL 1430 (1458)
Q Consensus 1421 vE~g~p~~Ll 1430 (1458)
++.|+++++.
T Consensus 474 ~~~~~~~~~~ 483 (501)
T PRK10762 474 SGEFTREQAT 483 (501)
T ss_pred EEEeccccCC
Confidence 9999988764
No 54
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.6e-61 Score=614.20 Aligned_cols=539 Identities=18% Similarity=0.220 Sum_probs=423.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 267 QVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIG 346 (1458)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g 346 (1458)
+..++.+++.++...+..++..++..+.|++++.+++.+.+... ... ...++.++++..++..++.....+...+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 93 (582)
T PRK11176 17 WPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD--RSV-LKWMPLVVIGLMILRGITSFISSYCISWVS 93 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc--hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777777777788888888889999999887654322 111 122222233333444444444445566778
Q ss_pred HHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 000504 347 IRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1458)
Q Consensus 347 ~~iR~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl 422 (1458)
.++...+...+|+|.++++.. .++.|+++|.++.|++++.++.. .+..++..++.+++.+.+++.. +|+.+++.+
T Consensus 94 ~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~l~l~~l 172 (582)
T PRK11176 94 GKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYY-SWQLSLILI 172 (582)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 888888889999999887653 33899999999999999998654 4455666667777776666643 436666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 423 FSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIA 502 (1458)
Q Consensus 423 ~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~ 502 (1458)
+++++...+...+.+..++..++.++..++..+...|.++|++.||.+++|+.+.++.++.-++-.+...+.....+...
T Consensus 173 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T PRK11176 173 VIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISD 252 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666677788888888999999999999999999999999999999998888877664443333333332222222
Q ss_pred HHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 000504 503 FLFWASP--TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPIT 580 (1458)
Q Consensus 503 ~~~~~~p--~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~ 580 (1458)
.+..... ..+.++.++.+....+.++.+.+..++.++..+..|+..+...+..+.+++.+++|+.++++.++..+...
T Consensus 253 ~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~ 332 (582)
T PRK11176 253 PIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGK 332 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCC
Confidence 2211111 22334556667677788999999999999999999999999999999999999999999998665221111
Q ss_pred CCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC
Q 000504 581 EPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG 659 (1458)
Q Consensus 581 ~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g 659 (1458)
. +.......|+++|++|+|++. ..+.|+| |+++++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 333 ~-~~~~~~~~i~~~~vsf~y~~~------~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I-~i~g 404 (582)
T PRK11176 333 R-VIERAKGDIEFRNVTFTYPGK------EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEI-LLDG 404 (582)
T ss_pred c-CCCCCCCeEEEEEEEEecCCC------CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceE-EECC
Confidence 1 111123469999999999753 3578999 99999999999999999999999999999999999997 7877
Q ss_pred E-------------EEEEcCCCCCCCCcHHHHHhcCCC--CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChH
Q 000504 660 K-------------KAYVPQSSWIQTGTIRENILFGKD--MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1458)
Q Consensus 660 ~-------------~ayv~Q~~~i~~~Ti~enI~fg~~--~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGG 724 (1458)
. ++||||+|.++++||+|||.+|.+ +++++++++++.++++++++.+|+|.+|.+|++|.+||||
T Consensus 405 ~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGG 484 (582)
T PRK11176 405 HDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGG 484 (582)
T ss_pred EEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHH
Confidence 3 699999999999999999999863 6889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccch
Q 000504 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYE 804 (1458)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~ 804 (1458)
||||++||||++++|+|++|||||||||+++++.+++. +....+++|+|+|||+++.++.||+|++|++|+|++.|+++
T Consensus 485 qrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~-l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~ 563 (582)
T PRK11176 485 QRQRIAIARALLRDSPILILDEATSALDTESERAIQAA-LDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHA 563 (582)
T ss_pred HHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999888764 55555789999999999999999999999999999999999
Q ss_pred hhhhhcchHHHHHHH
Q 000504 805 DLIADQNSELVRQMK 819 (1458)
Q Consensus 805 ~l~~~~~~~~~~~~~ 819 (1458)
++++ .+..+.++..
T Consensus 564 ~l~~-~~~~y~~l~~ 577 (582)
T PRK11176 564 ELLA-QNGVYAQLHK 577 (582)
T ss_pred HHHh-CCChHHHHHH
Confidence 9998 5566776654
No 55
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.7e-64 Score=627.11 Aligned_cols=445 Identities=22% Similarity=0.365 Sum_probs=338.4
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|.+++|+. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 11 ~l~~~~l~~~~~~--------~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~ 81 (510)
T PRK15439 11 LLCARSISKQYSG--------VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTL-EIGGNPCARLTPA 81 (510)
T ss_pred eEEEEeEEEEeCC--------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEECCCCCHH
Confidence 5899999999963 357899 99999999999999999999999999999999999987 6765
Q ss_pred -----EEEEEcCCCCCCC-CcHHHHHhcCCCCCH---HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHH
Q 000504 660 -----KKAYVPQSSWIQT-GTIRENILFGKDMRQ---SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1458)
Q Consensus 660 -----~~ayv~Q~~~i~~-~Ti~enI~fg~~~~~---~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 730 (1458)
.++|++|++.++. .|++||+.++..... ++.+++++..++.. ....+..+|||||||||+
T Consensus 82 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrv~ 150 (510)
T PRK15439 82 KAHQLGIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQL-----------DLDSSAGSLEVADRQIVE 150 (510)
T ss_pred HHHhCCEEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCc-----------cccCChhhCCHHHHHHHH
Confidence 2789999987655 599999999754321 22333344333321 224566799999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchhhhh
Q 000504 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
|||||+.+|+++||||||++||+.....+.+. +..+ .+++|+|++||+++++.. ||+|++|++|++++.|+++++..
T Consensus 151 la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 151 ILRGLMRDSRILILDEPTASLTPAETERLFSR-IRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred HHHHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 99999999999999999999999998888764 4443 357999999999999865 99999999999999888776643
Q ss_pred hcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhcCcchHHHHHHHHHHhh
Q 000504 809 DQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYSAFITLVY 888 (1458)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~ 888 (1458)
+. ..+... . . ... .. . +
T Consensus 230 ~~---~~~~~~------~-----------------------~----~~~----~~-~----~------------------ 246 (510)
T PRK15439 230 DD---IIQAIT------P-----------------------A----ARE----KS-L----S------------------ 246 (510)
T ss_pred HH---HHHHHh------C-----------------------c----ccc----cc-c----c------------------
Confidence 10 000000 0 0 000 00 0 0
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 889 KGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMIT 968 (1458)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~ 968 (1458)
.
T Consensus 247 -------------------------------~------------------------------------------------ 247 (510)
T PRK15439 247 -------------------------------A------------------------------------------------ 247 (510)
T ss_pred -------------------------------c------------------------------------------------
Confidence 0
Q ss_pred HHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000504 969 SVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYI 1048 (1458)
Q Consensus 969 ~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~ 1048 (1458)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 000504 1049 TTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLV 1128 (1458)
Q Consensus 1049 ~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~ 1128 (1458)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccE
Q 000504 1129 LIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKI 1208 (1458)
Q Consensus 1129 ~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I 1208 (1458)
.++. . ...|...+ .++ +..-.|
T Consensus 248 -----------------------------------------------~~~~-~-~~~~~~~~------~~~---~~~~~l 269 (510)
T PRK15439 248 -----------------------------------------------SQKL-W-LELPGNRR------QQA---AGAPVL 269 (510)
T ss_pred -----------------------------------------------cccc-c-cccccccc------ccC---CCCceE
Confidence 0000 0 00000000 000 011248
Q ss_pred EEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH-HhcceEE
Q 000504 1209 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRLSI 1287 (1458)
Q Consensus 1209 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i~i 1287 (1458)
+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+... .|.+++|
T Consensus 270 ~~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~ 342 (510)
T PRK15439 270 TVEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVY 342 (510)
T ss_pred EEeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEE
Confidence 9999983 1699999999999999999999999999999999999999999999999998776654 5678999
Q ss_pred EccCC---CCccc-cHHHhcCcC-----CC--CC---HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000504 1288 IPQDP---MLFQG-TVRTNLDPL-----EQ--HS---DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1353 (1458)
Q Consensus 1288 IpQdp---~LF~g-TIR~NLdp~-----~~--~s---deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1353 (1458)
+||+| .+|.. |+++|+... .. .. ++++.++++..++. +...|.++ ..||||||||+
T Consensus 343 v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~~~~----~~LSgG~kqrl 412 (510)
T PRK15439 343 LPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIK------FNHAEQAA----RTLSGGNQQKV 412 (510)
T ss_pred CCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCC------CCCccCcc----ccCCcHHHHHH
Confidence 99996 36654 999998421 10 01 12344555555542 12234444 46999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1354 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1354 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
+|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|+++..|+++++.+
T Consensus 413 ~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 492 (510)
T PRK15439 413 LIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAINV 492 (510)
T ss_pred HHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccCCH
Confidence 99999999999999999999999999999999998753 47899999999999976 99999999999999999988764
Q ss_pred c
Q 000504 1432 D 1432 (1458)
Q Consensus 1432 ~ 1432 (1458)
+
T Consensus 493 ~ 493 (510)
T PRK15439 493 D 493 (510)
T ss_pred H
Confidence 3
No 56
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=5e-61 Score=612.05 Aligned_cols=538 Identities=19% Similarity=0.228 Sum_probs=430.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 267 QVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIG 346 (1458)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g 346 (1458)
+.+++.+++.+++..++.++..++....|++++.+++..-.... ... -+.+++++++..++..+......+...+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 82 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD--RSV-LWWVPLVVIGLAVLRGICSFVSTYLLSWVS 82 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc--hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567788889999999999999999999999998885543222 111 122232333344444444444445566777
Q ss_pred HHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 000504 347 IRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1458)
Q Consensus 347 ~~iR~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl 422 (1458)
.++...+...+|+|.++.+.. ..+.|+++|.++.|++++.+++. .+..++...+.+++++++++. ++|+.+++.+
T Consensus 83 ~~~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~-~~~~l~~i~l 161 (571)
T TIGR02203 83 NKVVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLY-YSWQLTLIVV 161 (571)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHH
Confidence 777788888888888876543 23899999999999999998764 455556555666666665554 4546666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 423 FSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIA 502 (1458)
Q Consensus 423 ~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~ 502 (1458)
+++++.+.+...+.+..++..++..+..+++.+.++|.++|++.||.++.|+.+.++.++..++..+...+.....+...
T Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (571)
T TIGR02203 162 VMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISS 241 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677777778888999999999999999999999999999999999999999888888776655554444433333333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 000504 503 FLFWASPT--LVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPIT 580 (1458)
Q Consensus 503 ~~~~~~p~--~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~ 580 (1458)
.+...... .+.++.++.+.+..+.+|++.+++++.++..+..|+..+...+..+.+++++++|+.++++.++..+...
T Consensus 242 ~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 321 (571)
T TIGR02203 242 PITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGT 321 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 22222222 2334556777777889999999999999999999999999999999999999999999998765322111
Q ss_pred CCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC
Q 000504 581 EPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG 659 (1458)
Q Consensus 581 ~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g 659 (1458)
. +.......|+++|++|+|++. ..+.|++ |+++++||+++|+|+||||||||+++|+|.++|.+|++ .++|
T Consensus 322 ~-~~~~~~~~i~~~~v~f~y~~~------~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I-~i~g 393 (571)
T TIGR02203 322 R-AIERARGDVEFRNVTFRYPGR------DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQI-LLDG 393 (571)
T ss_pred C-CCCCCCCeEEEEEEEEEcCCC------CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeE-EECC
Confidence 1 111123469999999999754 3578999 99999999999999999999999999999999999997 8887
Q ss_pred -------------EEEEEcCCCCCCCCcHHHHHhcCC--CCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChH
Q 000504 660 -------------KKAYVPQSSWIQTGTIRENILFGK--DMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1458)
Q Consensus 660 -------------~~ayv~Q~~~i~~~Ti~enI~fg~--~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGG 724 (1458)
.++||||+|++|++|+||||.++. +.++++.+++++.|++++++..+|+|.+|.+|++|.+||||
T Consensus 394 ~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgG 473 (571)
T TIGR02203 394 HDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGG 473 (571)
T ss_pred EeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHH
Confidence 379999999999999999999996 48889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccch
Q 000504 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYE 804 (1458)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~ 804 (1458)
||||++||||++++|+|++||||||+||+++++++.+. +....+++|+|+|||+.+.+..||+|++|++|++++.|+++
T Consensus 474 qrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~-L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~ 552 (571)
T TIGR02203 474 QRQRLAIARALLKDAPILILDEATSALDNESERLVQAA-LERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHN 552 (571)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHH
Confidence 99999999999999999999999999999999988664 55566789999999999999999999999999999999999
Q ss_pred hhhhhcchHHHHHH
Q 000504 805 DLIADQNSELVRQM 818 (1458)
Q Consensus 805 ~l~~~~~~~~~~~~ 818 (1458)
++++ .+..+.++.
T Consensus 553 ~l~~-~~~~~~~~~ 565 (571)
T TIGR02203 553 ELLA-RNGLYAQLH 565 (571)
T ss_pred HHHH-cCCHHHHHH
Confidence 9987 444555443
No 57
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.1e-63 Score=624.75 Aligned_cols=437 Identities=24% Similarity=0.362 Sum_probs=329.4
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC--CCCcEEEECC--------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR--ISGAAIKVHG-------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~--~~G~~i~~~g-------- 659 (1458)
++++|.+++|+. .+.+++ ||++++|++++|+||||||||||+++|+|+.+| ++|++ .++|
T Consensus 2 l~i~~l~~~~~~--------~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i-~~~g~~~~~~~~ 72 (500)
T TIGR02633 2 LEMKGIVKTFGG--------VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEI-YWSGSPLKASNI 72 (500)
T ss_pred EEEEeEEEEeCC--------eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEE-EECCEECCCCCH
Confidence 688999999953 358999 999999999999999999999999999999986 79986 6665
Q ss_pred ------EEEEEcCCCCCCC-CcHHHHHhcCCCC-------CHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCC
Q 000504 660 ------KKAYVPQSSWIQT-GTIRENILFGKDM-------RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINL 721 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~enI~fg~~~-------~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~L 721 (1458)
.++|++|++.++. .|++||+.++... +.+ +.+++++.+++... .......+|
T Consensus 73 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~L 142 (500)
T TIGR02633 73 RDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDAD----------NVTRPVGDY 142 (500)
T ss_pred HHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCC----------cccCchhhC
Confidence 3799999987654 6999999987432 111 11222222222110 012346789
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 722 SGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 722 SGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
||||||||+||||++.+|+++||||||++||+.+...+.+ ++..+ .+++|||++||+++++.. ||+|++|++|+++.
T Consensus 143 SgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~ 221 (500)
T TIGR02633 143 GGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLD-IIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVA 221 (500)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEee
Confidence 9999999999999999999999999999999999888876 44443 357899999999999875 99999999999986
Q ss_pred cccchhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhcCcchHHH
Q 000504 800 SGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTV 879 (1458)
Q Consensus 800 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~ 879 (1458)
.|+.+++..+ .
T Consensus 222 ~~~~~~~~~~----------------------------------------~----------------------------- 232 (500)
T TIGR02633 222 TKDMSTMSED----------------------------------------D----------------------------- 232 (500)
T ss_pred ecCcccCCHH----------------------------------------H-----------------------------
Confidence 5432111000 0
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 880 YSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTA 959 (1458)
Q Consensus 880 y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s 959 (1458)
.+...
T Consensus 233 ---~~~~~------------------------------------------------------------------------ 237 (500)
T TIGR02633 233 ---IITMM------------------------------------------------------------------------ 237 (500)
T ss_pred ---HHHHH------------------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000504 960 QRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGI 1039 (1458)
Q Consensus 960 ~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l 1039 (1458)
T Consensus 238 -------------------------------------------------------------------------------- 237 (500)
T TIGR02633 238 -------------------------------------------------------------------------------- 237 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHH
Q 000504 1040 SIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINL 1119 (1458)
Q Consensus 1040 ~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1119 (1458)
+ +
T Consensus 238 -------~-----------------------------------~------------------------------------ 239 (500)
T TIGR02633 238 -------V-----------------------------------G------------------------------------ 239 (500)
T ss_pred -------h-----------------------------------C------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCC
Q 000504 1120 LFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPS 1199 (1458)
Q Consensus 1120 l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~ 1199 (1458)
. .. ++ ..+.++ .+
T Consensus 240 -----------------~-~~------------------------------------~~-----~~~~~~-------~~- 252 (500)
T TIGR02633 240 -----------------R-EI------------------------------------TS-----LYPHEP-------HE- 252 (500)
T ss_pred -----------------c-cc------------------------------------cc-----cccccc-------cC-
Confidence 0 00 00 000000 00
Q ss_pred CCCCCCccEEEEeeeEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-CCcEEEEcCeeCCCCC
Q 000504 1200 PEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-SGGRILIDGVDISMIG 1277 (1458)
Q Consensus 1200 ~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-~~G~I~IDG~dI~~i~ 1277 (1458)
+..-.|+++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+
T Consensus 253 ---~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~ 329 (500)
T TIGR02633 253 ---IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRN 329 (500)
T ss_pred ---CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCC
Confidence 011248999999999432 23599999999999999999999999999999999999995 8999999999987544
Q ss_pred H-HHHhcceEEEccCC---CCcc-ccHHHhcCcCC-----C---CC----HHHHHHHHHHcCcHHHHHhcccccCccccC
Q 000504 1278 L-QDLRSRLSIIPQDP---MLFQ-GTVRTNLDPLE-----Q---HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAE 1340 (1458)
Q Consensus 1278 l-~~LR~~i~iIpQdp---~LF~-gTIR~NLdp~~-----~---~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e 1340 (1458)
. ..+|++++++||++ .+|. -|+++|+.... . .. .+++.++++++++.+ ...|.++
T Consensus 330 ~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~-- 401 (500)
T TIGR02633 330 PAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKT------ASPFLPI-- 401 (500)
T ss_pred HHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccC------CCccCcc--
Confidence 3 56788999999996 3665 49999996421 1 11 123556666665521 1134444
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCC
Q 000504 1341 DGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEG 1418 (1458)
Q Consensus 1341 ~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G 1418 (1458)
..||||||||++|||||+++|++|||||||++||+.+.+.+++.|++.. ++.|||+|||+++.+.. ||+|++|++|
T Consensus 402 --~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G 479 (500)
T TIGR02633 402 --GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEG 479 (500)
T ss_pred --ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999888753 47899999999999976 9999999999
Q ss_pred EEEEecChhHH
Q 000504 1419 KVLEYDSPRQL 1429 (1458)
Q Consensus 1419 ~ivE~g~p~~L 1429 (1458)
+++...+..++
T Consensus 480 ~i~~~~~~~~~ 490 (500)
T TIGR02633 480 KLKGDFVNHAL 490 (500)
T ss_pred EEEEEEccccC
Confidence 99987765543
No 58
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=7.6e-61 Score=622.93 Aligned_cols=532 Identities=22% Similarity=0.267 Sum_probs=419.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 268 VIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGI 347 (1458)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~ 347 (1458)
..++.+++.++...++.++..++.++.|++++.+++.+-.... ... -+.+++++++..++..++.....+...+++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (708)
T TIGR01193 149 PLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM--MGT-LGIISIGLIIAYIIQQILSYIQIFLLNVLGQ 225 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777777788888899999999999999987643322 111 2233334444445555555555566777888
Q ss_pred HHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 000504 348 RVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLYI--HRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1458)
Q Consensus 348 ~iR~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~~~--~~~w~~plqi~~al~lL~~~lG~~a~l~gl 422 (1458)
++...+...+|+|.++++.. .+++|+++|.++ |++.+.++.... ..+...+. +++.+.+++. ++|+.+++.+
T Consensus 226 ~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~-~~~~l~li~l 302 (708)
T TIGR01193 226 RLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWI-LVIVGLFLVR-QNMLLFLLSL 302 (708)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HhHHHHHHHH
Confidence 88889999999999988653 349999999998 999999876432 22223333 3333333443 3435556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH----
Q 000504 423 FSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTC---- 498 (1458)
Q Consensus 423 ~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~---- 498 (1458)
+++++.+.+...+.+..++..++.++..+++.+...|.++|+++||.+++|+.+.++.++..++..+...+.....
T Consensus 303 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (708)
T TIGR01193 303 LSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQ 382 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666677788888899999999999999999999999999999999999998888776554444333322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-C
Q 000504 499 SAIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQK-K 577 (1458)
Q Consensus 499 a~~~~~~~~~p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~-~ 577 (1458)
++..++.... .+.++++|++.+..+.+|.+.++++..++..+..|+..+...+..+.+++++++|+.++++.+++. +
T Consensus 383 ~~~~~~~~~~--~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~ 460 (708)
T TIGR01193 383 AIKAVTKLIL--NVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFIN 460 (708)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 2222222222 234566788888899999999999999999999999999999999999999999999999876522 1
Q ss_pred CCCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEE
Q 000504 578 PITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIK 656 (1458)
Q Consensus 578 ~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~ 656 (1458)
.....+..+....|+++|++|+|+.+ .+.|+| |++|++|+.++|+|+||||||||+++|+|+++|++|++ .
T Consensus 461 ~~~~~~~~~~~~~I~~~~vsf~y~~~-------~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I-~ 532 (708)
T TIGR01193 461 KKKRTELNNLNGDIVINDVSYSYGYG-------SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEI-L 532 (708)
T ss_pred cccccCCCCCCCcEEEEEEEEEcCCC-------CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEE-E
Confidence 11111112223479999999999743 478999 99999999999999999999999999999999999997 8
Q ss_pred ECC-------------EEEEEcCCCCCCCCcHHHHHhcCC--CCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCC
Q 000504 657 VHG-------------KKAYVPQSSWIQTGTIRENILFGK--DMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINL 721 (1458)
Q Consensus 657 ~~g-------------~~ayv~Q~~~i~~~Ti~enI~fg~--~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~L 721 (1458)
++| .++||||+|++|++||+|||.+|. +.++++..++++.++++++++.+|+|.+|.+||+|.+|
T Consensus 533 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~L 612 (708)
T TIGR01193 533 LNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSI 612 (708)
T ss_pred ECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCC
Confidence 887 479999999999999999999983 46778889999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcc
Q 000504 722 SGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 722 SGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g 801 (1458)
|||||||++||||++++|+|+|||||||+||+++.+++.+.+ ... +++|+|+|||+++.+..||+|++|++|++++.|
T Consensus 613 SgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L-~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G 690 (708)
T TIGR01193 613 SGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNL-LNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQG 690 (708)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHH-HHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999988887754 443 689999999999999999999999999999999
Q ss_pred cchhhhhhcchHHHHHH
Q 000504 802 KYEDLIADQNSELVRQM 818 (1458)
Q Consensus 802 ~~~~l~~~~~~~~~~~~ 818 (1458)
+++|+++ .+..+.+++
T Consensus 691 ~~~~L~~-~~~~y~~l~ 706 (708)
T TIGR01193 691 SHDELLD-RNGFYASLI 706 (708)
T ss_pred CHHHHHh-cCCcHHHHh
Confidence 9999987 445555443
No 59
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.3e-60 Score=607.16 Aligned_cols=538 Identities=20% Similarity=0.249 Sum_probs=413.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 268 VIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGI 347 (1458)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~ 347 (1458)
..++.+++.++...++.++..++..+.|+++..+++.+..... .+......+++++++..++..++.....+...+.+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (592)
T PRK10790 16 AYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGN-LPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAV 94 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667777778888888899999999999999997643222 111111222333444444555555555666777888
Q ss_pred HHHHHHHHHHHHHhccccc---CCCCHHHHHHHHHhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 000504 348 RVRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFLYIH-RIWLLPVQVFLALVILYKNLGAAPAFAALF 423 (1458)
Q Consensus 348 ~iR~~L~~~Iy~K~L~ls~---~~~~~G~ivnlms~D~~ri~~~~~~~~-~~w~~plqi~~al~lL~~~lG~~a~l~gl~ 423 (1458)
++...+...+|+|.++.+. ...+.|+++|.++.|++++.+++.... .+....+.+++++.+++ .++|+.+++.++
T Consensus 95 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~li~l~ 173 (592)
T PRK10790 95 GVVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMF-SLDWRMALVAIM 173 (592)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 8888888889999888754 234899999999999999998765433 33333333333333333 345355555554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q 000504 424 STIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSA--- 500 (1458)
Q Consensus 424 ~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~--- 500 (1458)
++++.+.+.....+..++..++..+..++-.+...|.++|+++||.|+.|+.+.++..+..++..+...+.....+.
T Consensus 174 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (592)
T PRK10790 174 IFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLR 253 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445556666677777777788888889999999999999999999999998887655433332222211111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 000504 501 -IAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPI 579 (1458)
Q Consensus 501 -~~~~~~~~p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~ 579 (1458)
...++.....++.++ .+.+ ...+.++.+.+++++.++..+..|+..++.....+.++++|.+||.++++.+++++..
T Consensus 254 ~~~~~~~~~~~~~~~~-~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~ 331 (592)
T PRK10790 254 PLLSLFSALILCGLLM-LFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN 331 (592)
T ss_pred HHHHHHHHHHHHHHHH-HHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC
Confidence 111111111111112 2223 3567799999999999999999999999999999999999999999999865422111
Q ss_pred CCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEEC
Q 000504 580 TEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVH 658 (1458)
Q Consensus 580 ~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~ 658 (1458)
... ......|+++|++|+|+++ .+.|+| |+++++||+++|+|+||||||||+++|+|+++|++|++ .++
T Consensus 332 ~~~--~~~~~~i~~~~v~f~y~~~-------~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I-~id 401 (592)
T PRK10790 332 DDR--PLQSGRIDIDNVSFAYRDD-------NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEI-RLD 401 (592)
T ss_pred Ccc--CCCCCeEEEEEEEEEeCCC-------CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceE-EEC
Confidence 111 1123469999999999743 468999 99999999999999999999999999999999999986 888
Q ss_pred CE-------------EEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 659 GK-------------KAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 659 g~-------------~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
|. ++||||+|++|++||+|||.+|.+.++++.+++++.+++.++++.+|+|.+|.+|++|.+|||||
T Consensus 402 g~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGq 481 (592)
T PRK10790 402 GRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQ 481 (592)
T ss_pred CEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHH
Confidence 73 79999999999999999999999888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchh
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYED 805 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~ 805 (1458)
|||++||||++++|+|+|||||||+||+++++++.+ .+....+++|+|+|||+++.++.||+|++|++|++++.|+++|
T Consensus 482 rQRialARaLl~~~~illlDEpts~LD~~t~~~i~~-~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~ 560 (592)
T PRK10790 482 KQLLALARVLVQTPQILILDEATANIDSGTEQAIQQ-ALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQ 560 (592)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 999999999999999999999999999999888865 4566667899999999999999999999999999999999999
Q ss_pred hhhhcchHHHHHHHHh
Q 000504 806 LIADQNSELVRQMKAH 821 (1458)
Q Consensus 806 l~~~~~~~~~~~~~~~ 821 (1458)
+++ .+..+.++...+
T Consensus 561 L~~-~~~~y~~l~~~~ 575 (592)
T PRK10790 561 LLA-AQGRYWQMYQLQ 575 (592)
T ss_pred HHh-CCCHHHHHHHHH
Confidence 998 567777766543
No 60
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-63 Score=618.99 Aligned_cols=433 Identities=23% Similarity=0.344 Sum_probs=329.4
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 4 ~l~~~~l~~~~~~--------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I-~~~g~~i~~~~~~ 74 (501)
T PRK11288 4 YLSFDGIGKTFPG--------VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSI-LIDGQEMRFASTT 74 (501)
T ss_pred eEEEeeeEEEECC--------EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEE-EECCEECCCCCHH
Confidence 5889999999963 358899 99999999999999999999999999999999999987 6654
Q ss_pred -----EEEEEcCCCCCCC-CcHHHHHhcCCC------CCHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCCh
Q 000504 660 -----KKAYVPQSSWIQT-GTIRENILFGKD------MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1458)
Q Consensus 660 -----~~ayv~Q~~~i~~-~Ti~enI~fg~~------~~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSG 723 (1458)
.++|++|++.++. .|++||+.++.. .+.. +.+++++.+++. ........+|||
T Consensus 75 ~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSg 143 (501)
T PRK11288 75 AALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVD-----------IDPDTPLKYLSI 143 (501)
T ss_pred HHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCC-----------CCcCCchhhCCH
Confidence 3799999987765 599999998642 1111 222233333321 112456678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
|||||++||||++.+|+++||||||++||+.+...+.+. +..+ .+++|+|+|||+++++.. ||+|++|++|+++..+
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~ 222 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRV-IRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATF 222 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 999999999999999999999999999999998888764 4443 357999999999999865 9999999999987533
Q ss_pred cchhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhcCcchHHHHH
Q 000504 802 KYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYS 881 (1458)
Q Consensus 802 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~ 881 (1458)
+..+... .+ +
T Consensus 223 ~~~~~~~----------------------------------------~~------------------~------------ 232 (501)
T PRK11288 223 DDMAQVD----------------------------------------RD------------------Q------------ 232 (501)
T ss_pred CccccCC----------------------------------------HH------------------H------------
Confidence 2100000 00 0
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 882 AFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQR 961 (1458)
Q Consensus 882 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 961 (1458)
+.... .
T Consensus 233 -~~~~~------------------------------~------------------------------------------- 238 (501)
T PRK11288 233 -LVQAM------------------------------V------------------------------------------- 238 (501)
T ss_pred -HHHHh------------------------------c-------------------------------------------
Confidence 00000 0
Q ss_pred HHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000504 962 LFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISI 1041 (1458)
Q Consensus 962 l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~ 1041 (1458)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T PRK11288 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 000504 1042 WYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLF 1121 (1458)
Q Consensus 1042 ~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~ 1121 (1458)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T PRK11288 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCC
Q 000504 1122 NFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPE 1201 (1458)
Q Consensus 1122 ~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~ 1201 (1458)
.... ++. .+.++ .+
T Consensus 239 ---------------~~~~------------------------------------~~~-----~~~~~-------~~--- 252 (501)
T PRK11288 239 ---------------GREI------------------------------------GDI-----YGYRP-------RP--- 252 (501)
T ss_pred ---------------CCCc------------------------------------ccc-----ccccc-------cC---
Confidence 0000 000 00000 00
Q ss_pred CCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCH-HH
Q 000504 1202 WPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL-QD 1280 (1458)
Q Consensus 1202 wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l-~~ 1280 (1458)
+....++++|++++ .+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.
T Consensus 253 -~~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~ 325 (501)
T PRK11288 253 -LGEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDA 325 (501)
T ss_pred -CCCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHH
Confidence 01124889999742 38999999999999999999999999999999999999999999999999875433 45
Q ss_pred HhcceEEEccCCC---Ccc-ccHHHhcCcCC--C-------CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCC
Q 000504 1281 LRSRLSIIPQDPM---LFQ-GTVRTNLDPLE--Q-------HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGE 1343 (1458)
Q Consensus 1281 LR~~i~iIpQdp~---LF~-gTIR~NLdp~~--~-------~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~ 1343 (1458)
.|++++|+||+|. +|. .|+.+|+.... . .. ++++.+.++.+++. ++..++++ .
T Consensus 326 ~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~~~~----~ 395 (501)
T PRK11288 326 IRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIK------TPSREQLI----M 395 (501)
T ss_pred HhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcc------cCCccCcc----c
Confidence 6789999999973 554 69999986321 0 01 12355666666552 11234444 4
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000504 1344 NWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVL 1421 (1458)
Q Consensus 1344 nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~iv 1421 (1458)
+||||||||++||||++.+|++|||||||++||..+.+.+.+.|++.. .+.|||+|||+++.+.. ||+|++|++|+++
T Consensus 396 ~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~ 475 (501)
T PRK11288 396 NLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIA 475 (501)
T ss_pred cCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEE
Confidence 699999999999999999999999999999999999999999998754 47899999999999965 9999999999999
Q ss_pred EecChhHHh
Q 000504 1422 EYDSPRQLL 1430 (1458)
Q Consensus 1422 E~g~p~~Ll 1430 (1458)
+.|++.+..
T Consensus 476 ~~~~~~~~~ 484 (501)
T PRK11288 476 GELAREQAT 484 (501)
T ss_pred EEEccccCC
Confidence 999987755
No 61
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.7e-60 Score=640.73 Aligned_cols=216 Identities=17% Similarity=0.200 Sum_probs=187.9
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcc
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSR 1284 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~ 1284 (1458)
...|+++|++++|+.....+|+|+||+|++||.+||+|+||||||||+++|.|+.+|++|+|.++|.++.+ ..++.|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34599999999997533469999999999999999999999999999999999999999999999999975 46678899
Q ss_pred eEEEccCCCCccc-cHHHhcCcC---CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1285 LSIIPQDPMLFQG-TVRTNLDPL---EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1285 i~iIpQdp~LF~g-TIR~NLdp~---~~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
|||+||++.++.. |+||||..+ ...+. +.+.+.++.++|.++.. ..+ ..||||||||+++|
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~d-------k~~----~~LSGGqKqRLslA 2082 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYAD-------RLA----GTYSGGNKRKLSTA 2082 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhc-------CCh----hhCCHHHHHHHHHH
Confidence 9999999998875 999999642 12222 33556788888876543 333 35999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|||+.+|+||+|||||++||+.+.+.+++.|++. .+++|||++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 2083 ~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2083 IALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 9999999999999999999999999999999885 357999999999999976 999999999999999999999754
No 62
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1e-60 Score=603.76 Aligned_cols=471 Identities=17% Similarity=0.201 Sum_probs=364.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHH
Q 000504 933 FIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFAL 1012 (1458)
Q Consensus 933 y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~ 1012 (1458)
++++.++..++.+++.++....+.+...+++.++++++++.|++||++.++|++++|+++|++.+...+. .+..++.++
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~ 132 (547)
T PRK10522 54 FLGLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGI 132 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHH
Confidence 3333334445667788888889999999999999999999999999999999999999999999987654 466777888
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcch---HHHH
Q 000504 1013 IQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQE---NRFL 1089 (1458)
Q Consensus 1013 ~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e---~~f~ 1089 (1458)
+.+++.+++++..+|.++++++..+++.+++..++.+..+...+......+.+.+++.|.++|+.+++ ++.+ +.+.
T Consensus 133 ~~~i~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~ 211 (547)
T PRK10522 133 ILTLGSAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFE 211 (547)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHH
Confidence 88888888999999999888777776666666666666666666667788899999999999999995 5443 3555
Q ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHH-HHHHHHHHhhc-CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 1090 LRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAF-FLVLIILVTLP-RSAIDPSLAGLAATYGLNLNVLQAWVIWNLC 1167 (1458)
Q Consensus 1090 ~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~-~~~~~~~~~~~-~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~ 1167 (1458)
+++.+..++..+...... ++......+..+.. ....++++... .+....+..+....+.+.+...+..+...+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~ 287 (547)
T PRK10522 212 NEYEPDAQEYRHHIIRAD----TFHLSAVNWSNIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALP 287 (547)
T ss_pred HHHhHHHHHHHhhhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666555544333322 11111111111111 11111111110 1112233333333444445556777778888
Q ss_pred HHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCC
Q 000504 1168 NVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSG 1247 (1458)
Q Consensus 1168 ~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSG 1247 (1458)
++.....+.+|+.++.+.|.|++. +...+. |..+.|+++||+|+|+++ +++|+|+||+|++||++||||+||||
T Consensus 288 ~~~~~~~a~~ri~~l~~~~~~~~~--~~~~~~---~~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsG 361 (547)
T PRK10522 288 TLLSAQVAFNKLNKLALAPYKAEF--PRPQAF---PDWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSG 361 (547)
T ss_pred HHHHHHHHHHHHHHHhcccccccc--cccccc---CcCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCC
Confidence 899999999999998765543211 111111 223579999999999743 46999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHH
Q 000504 1248 KSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIV 1327 (1458)
Q Consensus 1248 KSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i 1327 (1458)
||||+++|+|+++|++|+|.+||+|+++++.+++|+++++|||||.+|+||+++| ....+|++++++++++++.+.+
T Consensus 362 KSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~ 438 (547)
T PRK10522 362 KSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKL 438 (547)
T ss_pred HHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhh
Confidence 9999999999999999999999999999999999999999999999999999999 2467888999999999988766
Q ss_pred HhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhh
Q 000504 1328 RQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPT 1405 (1458)
Q Consensus 1328 ~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~t 1405 (1458)
.. ++|. .+|.+||||||||++||||++++|+||+||||||+||+++++.|.+.+.+.. +++|+|+||||+++
T Consensus 439 ~~-~~~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~ 512 (547)
T PRK10522 439 EL-EDGR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHY 512 (547)
T ss_pred hc-cccC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHH
Confidence 42 4332 1478999999999999999999999999999999999999999999987654 47999999999999
Q ss_pred hhhcCEEEEEeCCEEEEec
Q 000504 1406 VIDNDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1406 i~~~DrVlvL~~G~ivE~g 1424 (1458)
+..||+|++|++|+++|.+
T Consensus 513 ~~~~d~i~~l~~G~i~e~~ 531 (547)
T PRK10522 513 FIHADRLLEMRNGQLSELT 531 (547)
T ss_pred HHhCCEEEEEECCEEEEec
Confidence 9999999999999999883
No 63
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-62 Score=614.10 Aligned_cols=433 Identities=21% Similarity=0.321 Sum_probs=323.9
Q ss_pred eeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC-------------
Q 000504 594 EAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------------- 659 (1458)
Q Consensus 594 ~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------------- 659 (1458)
+|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 2 ~nl~~~~~~--------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~~~~~ 72 (491)
T PRK10982 2 SNISKSFPG--------VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSI-LFQGKEIDFKSSKEALE 72 (491)
T ss_pred CceEEEeCC--------EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEE-EECCEECCCCCHHHHHh
Confidence 567787753 368899 99999999999999999999999999999999999987 6665
Q ss_pred -EEEEEcCCCCCC-CCcHHHHHhcCCC-C-----CHHH-HHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHH
Q 000504 660 -KKAYVPQSSWIQ-TGTIRENILFGKD-M-----RQSF-YEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1458)
Q Consensus 660 -~~ayv~Q~~~i~-~~Ti~enI~fg~~-~-----~~~~-y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 730 (1458)
.++|++|++.++ +.|++||+.++.. . +... .+++.+ -++.+ |-.........+|||||||||+
T Consensus 73 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~------~l~~~--~l~~~~~~~~~~LSgGq~qrv~ 144 (491)
T PRK10982 73 NGISMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKA------IFDEL--DIDIDPRAKVATLSVSQMQMIE 144 (491)
T ss_pred CCEEEEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHH------HHHHc--CCCCCccCchhhCCHHHHHHHH
Confidence 379999998764 5699999998642 1 1111 111111 11111 1112234567899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchhhhh
Q 000504 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
||||++.+|+++||||||++||+.+...+.+. +..+ ..++|+|++||+++++.. ||+|++|++|++++.|+.+++..
T Consensus 145 lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 223 (491)
T PRK10982 145 IAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTI-IRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTM 223 (491)
T ss_pred HHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCH
Confidence 99999999999999999999999998888764 4443 357999999999999865 99999999999987765433210
Q ss_pred hcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhcCcchHHHHHHHHHHhh
Q 000504 809 DQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYSAFITLVY 888 (1458)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~ 888 (1458)
. + ... . .
T Consensus 224 ~---~---~~~------------------------------~------------------------------------~- 230 (491)
T PRK10982 224 D---K---IIA------------------------------M------------------------------------M- 230 (491)
T ss_pred H---H---HHH------------------------------H------------------------------------H-
Confidence 0 0 000 0 0
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 889 KGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMIT 968 (1458)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~ 968 (1458)
T Consensus 231 -------------------------------------------------------------------------------- 230 (491)
T PRK10982 231 -------------------------------------------------------------------------------- 230 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000504 969 SVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYI 1048 (1458)
Q Consensus 969 ~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~ 1048 (1458)
+
T Consensus 231 ------------------------------------------------------------------------------~- 231 (491)
T PRK10982 231 ------------------------------------------------------------------------------V- 231 (491)
T ss_pred ------------------------------------------------------------------------------h-
Confidence 0
Q ss_pred HHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 000504 1049 TTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLV 1128 (1458)
Q Consensus 1049 ~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~ 1128 (1458)
+
T Consensus 232 ----------------------------------~--------------------------------------------- 232 (491)
T PRK10982 232 ----------------------------------G--------------------------------------------- 232 (491)
T ss_pred ----------------------------------C---------------------------------------------
Confidence 0
Q ss_pred HHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccE
Q 000504 1129 LIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKI 1208 (1458)
Q Consensus 1129 ~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I 1208 (1458)
. . + .+ ..+.+. .+ +....|
T Consensus 233 --------~-~---------------------------------~---~~-----~~~~~~-------~~----~~~~~i 251 (491)
T PRK10982 233 --------R-S---------------------------------L---TQ-----RFPDKE-------NK----PGEVIL 251 (491)
T ss_pred --------C-C---------------------------------c---cc-----cccccc-------CC----CCCcEE
Confidence 0 0 0 00 000000 00 112258
Q ss_pred EEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH-HHhcceEE
Q 000504 1209 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ-DLRSRLSI 1287 (1458)
Q Consensus 1209 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~-~LR~~i~i 1287 (1458)
+++|++++| +.+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|+.++|
T Consensus 252 ~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~ 327 (491)
T PRK10982 252 EVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFAL 327 (491)
T ss_pred EEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEE
Confidence 999999875 2489999999999999999999999999999999999999999999999999877654 45788999
Q ss_pred EccCCC---Cccc-cHHHh-----cCcC----CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1288 IPQDPM---LFQG-TVRTN-----LDPL----EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1288 IpQdp~---LF~g-TIR~N-----Ldp~----~~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
+||++. +|.. |+++| +... +..+. +++.+.++..++. .+.+|.++ ..||||||
T Consensus 328 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~~~~----~~LSgGq~ 397 (491)
T PRK10982 328 VTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVK------TPGHRTQI----GSLSGGNQ 397 (491)
T ss_pred cCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCcc------CCCccccc----ccCCcHHH
Confidence 999963 5653 67666 3211 11121 2234444444432 11234444 46999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
||++||||++++|+||||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||||++|++|+++..+++.+
T Consensus 398 qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~ 477 (491)
T PRK10982 398 QKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTKT 477 (491)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEcccc
Confidence 99999999999999999999999999999999999997743 47899999999999865 99999999999998887654
Q ss_pred Hh
Q 000504 1429 LL 1430 (1458)
Q Consensus 1429 Ll 1430 (1458)
+.
T Consensus 478 ~~ 479 (491)
T PRK10982 478 TT 479 (491)
T ss_pred CC
Confidence 43
No 64
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1e-60 Score=656.78 Aligned_cols=474 Identities=19% Similarity=0.215 Sum_probs=373.1
Q ss_pred HHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000504 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1458)
Q Consensus 952 ~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~ 1031 (1458)
...+.+....+...+++++++.|..++++..+|+++||+++|++.++... ..+..++...+.++..++++...-....+
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg~~~l 444 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLGVASL 444 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 45677777778889999999999999999999999999999999999875 44555555555544444433221101111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 000504 1032 LFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTME 1111 (1458)
Q Consensus 1032 v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1111 (1458)
+.++++++++.+..++.+..+..++.....+....+.++|.++|+++||+|++|+.+.+++.+..++..+..........
T Consensus 445 ~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~ 524 (1495)
T PLN03232 445 FGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSA 524 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222223333445555666666667777778899999999999999999999999999888776665554443333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCcc
Q 000504 1112 WLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPL 1191 (1458)
Q Consensus 1112 wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1191 (1458)
+..........+ +.++.+.......+.++++.+..++++...+...+..+...+..+.+...|.+|+.++.+.+++.+.
T Consensus 525 ~~~~~~~~~~~~-~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~ 603 (1495)
T PLN03232 525 FNSFILNSIPVV-VTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILA 603 (1495)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 322221111111 1111122222336678888888888888888888888888889999999999999999976544211
Q ss_pred ccCCCCCCCCCCCCccEEEEeeeEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcC
Q 000504 1192 VIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDG 1270 (1458)
Q Consensus 1192 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG 1270 (1458)
. .++ ..+..+.|+++|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+.
T Consensus 604 ---~-~~~-~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~--- 675 (1495)
T PLN03232 604 ---Q-NPP-LQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV--- 675 (1495)
T ss_pred ---c-cCC-cCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE---
Confidence 1 111 11234579999999999753 35799999999999999999999999999999999999999998763
Q ss_pred eeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1271 VDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1271 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
.+|++++||||+|.+|+|||||||....++++++++++++.|++.+.++.+|+|+||.|||+|.|||||||
T Consensus 676 ---------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQk 746 (1495)
T PLN03232 676 ---------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQK 746 (1495)
T ss_pred ---------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHH
Confidence 46889999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHH-HHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHH
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVI-QQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~I-q~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
||++||||++++|+|++||||||+||++|++.| ++.++...+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 747 QRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL 826 (1495)
T PLN03232 747 QRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAEL 826 (1495)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHH
Confidence 999999999999999999999999999999977 5567766789999999999999999999999999999999999999
Q ss_pred hhcCCChHHHHHHHHH
Q 000504 1430 LEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1430 l~~~~s~F~~l~~~~~ 1445 (1458)
++ +++.|++++++..
T Consensus 827 ~~-~~~~~~~l~~~~~ 841 (1495)
T PLN03232 827 SK-SGSLFKKLMENAG 841 (1495)
T ss_pred Hh-cchhHHHHHHhcc
Confidence 96 5688999987654
No 65
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.4e-62 Score=612.74 Aligned_cols=483 Identities=22% Similarity=0.309 Sum_probs=332.8
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEEC--CEEEEEc
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVH--GKKAYVP 665 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~--g~~ayv~ 665 (1458)
..++++|++++|+.+ .+.+++ ||+|++|++++|+||||||||||+++|+|+++|++|++ .++ ..++||+
T Consensus 5 ~~l~i~~l~~~y~~~-------~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i-~~~~~~~i~~v~ 76 (556)
T PRK11819 5 YIYTMNRVSKVVPPK-------KQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEA-RPAPGIKVGYLP 76 (556)
T ss_pred EEEEEeeEEEEeCCC-------CeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EecCCCEEEEEe
Confidence 358999999999621 468999 99999999999999999999999999999999999997 654 4699999
Q ss_pred CCCCCCC-CcHHHHHhcCCC-CCH--H---------------------HHHHHHHHhh------hhhhHHhh-cCCCccc
Q 000504 666 QSSWIQT-GTIRENILFGKD-MRQ--S---------------------FYEEVLEGCA------LNQDIEMW-ADGDLSV 713 (1458)
Q Consensus 666 Q~~~i~~-~Ti~enI~fg~~-~~~--~---------------------~y~~vl~~c~------l~~dl~~l-~~gd~t~ 713 (1458)
|+|+++. .|++||+.++.. +.. . .+.++.+.+. ..+.++.+ ..-....
T Consensus 77 Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 156 (556)
T PRK11819 77 QEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCPP 156 (556)
T ss_pred cCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCCc
Confidence 9998865 599999988631 000 0 0111111110 01111111 0000112
Q ss_pred ccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEE
Q 000504 714 VGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVM 792 (1458)
Q Consensus 714 ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l 792 (1458)
...+..+|||||||||+||||++.+|+++|||||||+||+.+..++.+ ++..+ ++|+|+|||+++++.. ||+|++|
T Consensus 157 ~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~-~L~~~--~~tviiisHd~~~~~~~~d~i~~l 233 (556)
T PRK11819 157 WDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQ-FLHDY--PGTVVAVTHDRYFLDNVAGWILEL 233 (556)
T ss_pred ccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHH-HHHhC--CCeEEEEeCCHHHHHhhcCeEEEE
Confidence 355678999999999999999999999999999999999999877764 55544 3699999999999876 9999999
Q ss_pred eCCeEE-EcccchhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhh
Q 000504 793 KDGKIE-QSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTE 871 (1458)
Q Consensus 793 ~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 871 (1458)
++|+++ +.|+|+++.+.............+. .+ .
T Consensus 234 ~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-------------------------~~-------------------~- 268 (556)
T PRK11819 234 DRGRGIPWEGNYSSWLEQKAKRLAQEEKQEAA-------------------------RQ-------------------K- 268 (556)
T ss_pred eCCEEEEecCCHHHHHHHHHHHHHHHHHHHHH-------------------------HH-------------------H-
Confidence 999986 8899988765211111000000000 00 0
Q ss_pred cCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 000504 872 LGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLL 951 (1458)
Q Consensus 872 ~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~ 951 (1458)
-+..... |.
T Consensus 269 -----------~~~~~~~-----------------------~~------------------------------------- 277 (556)
T PRK11819 269 -----------ALKRELE-----------------------WV------------------------------------- 277 (556)
T ss_pred -----------HHHHHHH-----------------------HH-------------------------------------
Confidence 0000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000504 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1458)
Q Consensus 952 ~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~ 1031 (1458)
T Consensus 278 -------------------------------------------------------------------------------- 277 (556)
T PRK11819 278 -------------------------------------------------------------------------------- 277 (556)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 000504 1032 LFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTME 1111 (1458)
Q Consensus 1032 v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1111 (1458)
++ ++. + + ..
T Consensus 278 -----------------------~~------~~~---------~----~----~~------------------------- 286 (556)
T PRK11819 278 -----------------------RQ------SPK---------A----R----QA------------------------- 286 (556)
T ss_pred -----------------------HH------hhh---------h----h----HH-------------------------
Confidence 00 000 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCcc
Q 000504 1112 WLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPL 1191 (1458)
Q Consensus 1112 wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1191 (1458)
..+......+|..+. .+.+.+.
T Consensus 287 --------------------------------------------------------~~~~~~~~~~~~~~~--~~~~~~~ 308 (556)
T PRK11819 287 --------------------------------------------------------KSKARLARYEELLSE--EYQKRNE 308 (556)
T ss_pred --------------------------------------------------------HHHHHHHHHHHhhcc--cccccCC
Confidence 000000000111110 0011000
Q ss_pred ccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCe
Q 000504 1192 VIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGV 1271 (1458)
Q Consensus 1192 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~ 1271 (1458)
......++...+.+..|+++|++++|.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++
T Consensus 309 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~- 385 (556)
T PRK11819 309 TNEIFIPPGPRLGDKVIEAENLSKSFGD--RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE- 385 (556)
T ss_pred CceeecCCCCCCCCeEEEEEeEEEEECC--eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-
Confidence 0000001111112335999999999964 3599999999999999999999999999999999999999999999964
Q ss_pred eCCCCCHHHHhcceEEEccCC-CCccc-cHHHhcCcCCC-----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCC
Q 000504 1272 DISMIGLQDLRSRLSIIPQDP-MLFQG-TVRTNLDPLEQ-----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGEN 1344 (1458)
Q Consensus 1272 dI~~i~l~~LR~~i~iIpQdp-~LF~g-TIR~NLdp~~~-----~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1344 (1458)
++ +++|+||++ .++.. |+++|+..... ..+++..++++..++.+. .++..+ ..
T Consensus 386 ~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~----~~ 445 (556)
T PRK11819 386 TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGG------DQQKKV----GV 445 (556)
T ss_pred ce----------EEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChh------HhcCch----hh
Confidence 21 699999997 56654 99999863211 123345566777666321 123334 46
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeC-CEEEE
Q 000504 1345 WSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDE-GKVLE 1422 (1458)
Q Consensus 1345 LSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~-G~ivE 1422 (1458)
||||||||++||||++.+|++|||||||++||+.+...+.+.|++. + .|||+|||+++.+.. ||+|++|++ |++.+
T Consensus 446 LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~ 523 (556)
T PRK11819 446 LSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEW 523 (556)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEE
Confidence 9999999999999999999999999999999999999999999875 3 499999999998876 999999986 88875
Q ss_pred -ecChhHHhhc
Q 000504 1423 -YDSPRQLLED 1432 (1458)
Q Consensus 1423 -~g~p~~Ll~~ 1432 (1458)
.|++.+++++
T Consensus 524 ~~g~~~~~~~~ 534 (556)
T PRK11819 524 FEGNFQEYEED 534 (556)
T ss_pred ecCCHHHHHHH
Confidence 6788877754
No 66
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=8.6e-60 Score=601.06 Aligned_cols=541 Identities=19% Similarity=0.260 Sum_probs=416.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 266 PQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRI 345 (1458)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~ 345 (1458)
++.+++.+++.+.+..++.++..++..+.|+++..+++.+-.... ... -..+++.+++..++..+......+...++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 9 LWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS-SGL--LNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc-HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556677778888888889999999999999999997432221 111 11122222233333344444455667788
Q ss_pred HHHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000504 346 GIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAA 421 (1458)
Q Consensus 346 g~~iR~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~g 421 (1458)
+.++...+...+|+|.++.+.. ..+.|+++|.++.|++.+.+++. .+..++...+.+++++++++..-. +.+++.
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~ 164 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSP-KLTSLV 164 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHH
Confidence 8899999999999999987543 23889999999999999988764 344444444445444444432222 333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 422 LFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAI 501 (1458)
Q Consensus 422 l~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~ 501 (1458)
++.+++.+.+...+.+..++..++.++..+++.+...|.++|+++||.+++|+.+.++.++..++..+...+.....+..
T Consensus 165 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 165 LLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444445567788888889999999999999999999999999999999988888877655444433332222221
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-CCC
Q 000504 502 AFLFW--ASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQ-KKP 578 (1458)
Q Consensus 502 ~~~~~--~~p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~-~~~ 578 (1458)
..+.. .....+..+.++.+.+..+.++.+.++++..++..+..|+..++..+..+.+++++++||.++++.+++ +..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 11111 112233445567777778899999999999999999999999999999999999999999999986542 111
Q ss_pred CCC-CCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEE
Q 000504 579 ITE-PTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIK 656 (1458)
Q Consensus 579 ~~~-~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~ 656 (1458)
... ....+....|+++|++|+|+.+ ..++.|+| |++++|||+++|+|+||||||||+++|+|+++|.+|++ .
T Consensus 325 ~~~~~~~~~~~~~i~~~~v~f~y~~~-----~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I-~ 398 (576)
T TIGR02204 325 AHPKTLPVPLRGEIEFEQVNFAYPAR-----PDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRI-L 398 (576)
T ss_pred CCCccCCcCCCceEEEEEEEEECCCC-----CCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE-E
Confidence 111 1111123469999999999854 23578999 99999999999999999999999999999999999987 7
Q ss_pred ECC-------------EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCC
Q 000504 657 VHG-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1458)
Q Consensus 657 ~~g-------------~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LS 722 (1458)
++| .++||||+|+++++||+|||.+|.+ .++++.+++++.+++.++++.+|+|.+|.+|++|.+||
T Consensus 399 i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LS 478 (576)
T TIGR02204 399 LDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLS 478 (576)
T ss_pred ECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCC
Confidence 877 4799999999999999999999875 46778888999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEccc
Q 000504 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~ 802 (1458)
||||||++||||++++|++++||||||+||+++++.+++ .+....+++|+|+|||+++.++.+|+|++|++|++++.|+
T Consensus 479 gGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~-~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~ 557 (576)
T TIGR02204 479 GGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQ-ALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGT 557 (576)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHH-HHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeec
Confidence 999999999999999999999999999999999877765 4556667999999999999999999999999999999999
Q ss_pred chhhhhhcchHHHHHH
Q 000504 803 YEDLIADQNSELVRQM 818 (1458)
Q Consensus 803 ~~~l~~~~~~~~~~~~ 818 (1458)
++++.+ .+..+.++.
T Consensus 558 ~~~l~~-~~~~~~~l~ 572 (576)
T TIGR02204 558 HAELIA-KGGLYARLA 572 (576)
T ss_pred HHHHHH-cCChHHHHH
Confidence 999887 555555544
No 67
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.6e-60 Score=654.06 Aligned_cols=473 Identities=19% Similarity=0.222 Sum_probs=374.2
Q ss_pred HHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000504 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1458)
Q Consensus 952 ~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~ 1031 (1458)
...+.+.-..+...+++++++.|..+++..++|+++|++++|++.++.... .+..++...+.++..++++...-....+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l 444 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASL 444 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356677777778889999999999999999999999999999999998763 4555555555555544443332112222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 000504 1032 LFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTME 1111 (1458)
Q Consensus 1032 v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1111 (1458)
+.++++++.+.++.++.+..+..++.....+....+.++|.++|+++||+|++|+.|.++..+..+...+..........
T Consensus 445 ~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~ 524 (1622)
T PLN03130 445 IGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSA 524 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233334444555566666667777777788889999999999999999999999999887766654443332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCcc
Q 000504 1112 WLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPL 1191 (1458)
Q Consensus 1112 wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1191 (1458)
+..........+ +.++.+.......+.++++.+..++++...+...+..+...+..+.+..+|.+|+.+|.+.+++.+.
T Consensus 525 ~~~~~~~~~~~~-v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~ 603 (1622)
T PLN03130 525 FNSFILNSIPVL-VTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLL 603 (1622)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 222211111111 1111122223346778888887777777777777778888899999999999999999976543211
Q ss_pred ccCCCCCCCCCCCCccEEEEeeeEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCC-cEEEEc
Q 000504 1192 VIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSG-GRILID 1269 (1458)
Q Consensus 1192 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~-G~I~ID 1269 (1458)
..++ .-+..+.|+++|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|.++|.+ |+|.+
T Consensus 604 ----~~~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l- 677 (1622)
T PLN03130 604 ----PNPP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI- 677 (1622)
T ss_pred ----cCCc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE-
Confidence 0111 11224579999999999753 3579999999999999999999999999999999999999999 89974
Q ss_pred CeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000504 1270 GVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1270 G~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
|++++||||+|.+|+|||||||..+.++++++++++++.|+|.+.+..+|+|+||.|||+|.||||||
T Consensus 678 ------------~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQ 745 (1622)
T PLN03130 678 ------------RGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQ 745 (1622)
T ss_pred ------------cCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHH
Confidence 66899999999999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHH-HHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhH
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVI-QQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~I-q~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
||||+||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|++|+++|.|+|++
T Consensus 746 KQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~e 825 (1622)
T PLN03130 746 KQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEE 825 (1622)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999876 567877778999999999999999999999999999999999999
Q ss_pred HhhcCCChHHHHHHHHH
Q 000504 1429 LLEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1429 Ll~~~~s~F~~l~~~~~ 1445 (1458)
|++ +++.|++++++..
T Consensus 826 L~~-~~~~~~~l~~~~~ 841 (1622)
T PLN03130 826 LSN-NGPLFQKLMENAG 841 (1622)
T ss_pred HHh-cchhHHHHHHhcc
Confidence 996 5688999987654
No 68
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.1e-62 Score=614.39 Aligned_cols=439 Identities=21% Similarity=0.297 Sum_probs=329.7
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+. ...|++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 3 ~l~~~~l~~~~~~--------~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i-~~~~~~~~~~~~~ 73 (490)
T PRK10938 3 SLQISQGTFRLSD--------TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGER-QSQFSHITRLSFE 73 (490)
T ss_pred eEEEEeEEEEcCC--------eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceE-EECCcccccCCHH
Confidence 3789999999963 247999 99999999999999999999999999999999999987 5544
Q ss_pred ----EEEEEcCCCCC---------CCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHH
Q 000504 660 ----KKAYVPQSSWI---------QTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1458)
Q Consensus 660 ----~~ayv~Q~~~i---------~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 726 (1458)
.++|++|++-. +..|++||+.++.. ++++.+++++..++.+. .+....+||||||
T Consensus 74 ~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~ 141 (490)
T PRK10938 74 QLQKLVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITAL-----------LDRRFKYLSTGET 141 (490)
T ss_pred HHHHHhceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhh-----------hhCCcccCCHHHH
Confidence 16899998643 14589999876532 23344455555544321 2356679999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccch
Q 000504 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYE 804 (1458)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~ 804 (1458)
|||+||||+..+|+++||||||++||+...+.+.+. +..+ .+++|+|++||+++++.. ||+|++|++|+++..|+++
T Consensus 142 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~ 220 (490)
T PRK10938 142 RKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAEL-LASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGERE 220 (490)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999998888764 4444 347899999999999865 9999999999999888766
Q ss_pred hhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhcCcchHHHHHHHH
Q 000504 805 DLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYSAFI 884 (1458)
Q Consensus 805 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~ 884 (1458)
++... . ....... .+ . .
T Consensus 221 ~~~~~-~-~~~~~~~-----------------------------~~----~--------~-------------------- 237 (490)
T PRK10938 221 EILQQ-A-LVAQLAH-----------------------------SE----Q--------L-------------------- 237 (490)
T ss_pred HHhcc-h-hhhhhhh-----------------------------hh----c--------c--------------------
Confidence 54320 0 0000000 00 0 0
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 885 TLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFL 964 (1458)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~ 964 (1458)
. ..
T Consensus 238 ---------------------------------~-~~------------------------------------------- 240 (490)
T PRK10938 238 ---------------------------------E-GV------------------------------------------- 240 (490)
T ss_pred ---------------------------------C-cc-------------------------------------------
Confidence 0 00
Q ss_pred HHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000504 965 NMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQ 1044 (1458)
Q Consensus 965 ~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~ 1044 (1458)
+
T Consensus 241 ---------~---------------------------------------------------------------------- 241 (490)
T PRK10938 241 ---------Q---------------------------------------------------------------------- 241 (490)
T ss_pred ---------c----------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 000504 1045 AYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFA 1124 (1458)
Q Consensus 1045 ~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~ 1124 (1458)
T Consensus 242 -------------------------------------------------------------------------------- 241 (490)
T PRK10938 242 -------------------------------------------------------------------------------- 241 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCC
Q 000504 1125 FFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPS 1204 (1458)
Q Consensus 1125 ~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~ 1204 (1458)
.+ + ..++.. .. ..+ +.
T Consensus 242 ----------~~-----------------------------------------~-------~~~~~~--~~-~~~---~~ 257 (490)
T PRK10938 242 ----------LP-----------------------------------------E-------PDEPSA--RH-ALP---AN 257 (490)
T ss_pred ----------cC-----------------------------------------c-------cccccc--cc-ccC---CC
Confidence 00 0 000000 00 000 01
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-CCcEEEEcCeeCCC-CCHHHHh
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-SGGRILIDGVDISM-IGLQDLR 1282 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-~~G~I~IDG~dI~~-i~l~~LR 1282 (1458)
...|+++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.. ......|
T Consensus 258 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~ 335 (490)
T PRK10938 258 EPRIVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIK 335 (490)
T ss_pred CceEEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHH
Confidence 225999999999964 3599999999999999999999999999999999998876 69999999987632 2334578
Q ss_pred cceEEEccCCCCcc---ccHHHhcCcC--------CCCC---HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000504 1283 SRLSIIPQDPMLFQ---GTVRTNLDPL--------EQHS---DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1348 (1458)
Q Consensus 1283 ~~i~iIpQdp~LF~---gTIR~NLdp~--------~~~s---deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1348 (1458)
++++|+||++.++. .|+++++.+. .... ++++.++++.+++.+. -+|.++ ..||||
T Consensus 336 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~----~~LSgG 405 (490)
T PRK10938 336 KHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKR------TADAPF----HSLSWG 405 (490)
T ss_pred hhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchh------hccCch----hhCCHH
Confidence 89999999986642 3677776421 1111 2356677888777531 123334 469999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC-C-cEEEEEecChhhhhh--cCEEEEEeCCEEEEec
Q 000504 1349 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS-R-CTVITVAHRIPTVID--NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1349 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~-~-~TVI~IAHrl~ti~~--~DrVlvL~~G~ivE~g 1424 (1458)
||||++|||||+++|++|+|||||++||+.+...+.+.|++..+ + +|||+|||+++.+.. ||+|++|++|++++.-
T Consensus 406 q~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 406 QQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEee
Confidence 99999999999999999999999999999999999999988643 3 479999999999974 7999999999998864
Q ss_pred C
Q 000504 1425 S 1425 (1458)
Q Consensus 1425 ~ 1425 (1458)
+
T Consensus 486 ~ 486 (490)
T PRK10938 486 Q 486 (490)
T ss_pred c
Confidence 3
No 69
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.6e-61 Score=610.69 Aligned_cols=481 Identities=22% Similarity=0.309 Sum_probs=332.3
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEEC--CEEEEEcC
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVH--GKKAYVPQ 666 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~--g~~ayv~Q 666 (1458)
.++++|++++|+.+ .+.+++ ||++++|++++|+|+||||||||+++|+|+.+|++|++ .++ ..++|++|
T Consensus 4 ~i~~~nls~~~~~~-------~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i-~~~~~~~i~~v~Q 75 (552)
T TIGR03719 4 IYTMNRVSKVVPPK-------KEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEA-RPAPGIKVGYLPQ 75 (552)
T ss_pred EEEEeeEEEecCCC-------CeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EecCCCEEEEEec
Confidence 58899999999622 368999 99999999999999999999999999999999999987 665 46999999
Q ss_pred CCCCC-CCcHHHHHhcCCCC------------------CH---------HHHHHHHHHhhhh---hhHHhh-cCCCcccc
Q 000504 667 SSWIQ-TGTIRENILFGKDM------------------RQ---------SFYEEVLEGCALN---QDIEMW-ADGDLSVV 714 (1458)
Q Consensus 667 ~~~i~-~~Ti~enI~fg~~~------------------~~---------~~y~~vl~~c~l~---~dl~~l-~~gd~t~i 714 (1458)
+|+++ +.|++|||.++... +. .++.++++.++.. ..+..+ ..-.....
T Consensus 76 ~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 155 (552)
T TIGR03719 76 EPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPPW 155 (552)
T ss_pred cCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCCcc
Confidence 99886 46999999886310 01 1123333334321 111111 10011123
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEe
Q 000504 715 GERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMK 793 (1458)
Q Consensus 715 g~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~ 793 (1458)
+....+|||||||||+||||++.+|+++||||||++||+++..++.+ .+... ++|+|+|||+++++.. ||+|++|+
T Consensus 156 ~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~-~L~~~--~~tvIiisHd~~~~~~~~d~v~~l~ 232 (552)
T TIGR03719 156 DADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQ-HLQEY--PGTVVAVTHDRYFLDNVAGWILELD 232 (552)
T ss_pred cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHH-HHHhC--CCeEEEEeCCHHHHHhhcCeEEEEE
Confidence 55678999999999999999999999999999999999999887765 45443 4699999999999876 99999999
Q ss_pred CCeEE-EcccchhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhc
Q 000504 794 DGKIE-QSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTEL 872 (1458)
Q Consensus 794 ~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 872 (1458)
+|+++ +.|+++++.+...............
T Consensus 233 ~g~i~~~~g~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------- 263 (552)
T TIGR03719 233 RGRGIPWEGNYSSWLEQKEKRLEQEEKEESA------------------------------------------------- 263 (552)
T ss_pred CCEEEEecCCHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Confidence 99975 7899988865211111000000000
Q ss_pred CcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 873 GRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLA 952 (1458)
Q Consensus 873 g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~ 952 (1458)
+...+.... -|+
T Consensus 264 -------~~~~~~~~~-----------------------~~~-------------------------------------- 275 (552)
T TIGR03719 264 -------RQKALKREL-----------------------EWV-------------------------------------- 275 (552)
T ss_pred -------HHHHHHHHH-----------------------HHH--------------------------------------
Confidence 000000000 000
Q ss_pred HHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000504 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1458)
Q Consensus 953 ~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v 1032 (1458)
T Consensus 276 -------------------------------------------------------------------------------- 275 (552)
T TIGR03719 276 -------------------------------------------------------------------------------- 275 (552)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHH
Q 000504 1033 FLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEW 1112 (1458)
Q Consensus 1033 ~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1112 (1458)
.+ .+.. . ++ +.
T Consensus 276 ----------------------~~------~~~~---~---------~~---------~~-------------------- 286 (552)
T TIGR03719 276 ----------------------RS------SPKA---R---------QA---------KS-------------------- 286 (552)
T ss_pred ----------------------Hh------hhhh---H---------HH---------HH--------------------
Confidence 00 0000 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccc
Q 000504 1113 LCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLV 1192 (1458)
Q Consensus 1113 l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~ 1192 (1458)
+......++..+. . +..++..
T Consensus 287 ---------------------------------------------------------~~~~~~~~~~~~~-~-~~~~~~~ 307 (552)
T TIGR03719 287 ---------------------------------------------------------KARLARYEELLSQ-E-FQKRNET 307 (552)
T ss_pred ---------------------------------------------------------HHHHHHHHhhhhh-c-ccccCCC
Confidence 0000000111110 0 0000000
Q ss_pred cCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCee
Q 000504 1193 IKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVD 1272 (1458)
Q Consensus 1193 ~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~d 1272 (1458)
.....+...-+.+..|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+++ +
T Consensus 308 ~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~ 384 (552)
T TIGR03719 308 AEIYIPPGPRLGDKVIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-T 384 (552)
T ss_pred ceeecCCCCCCCCeEEEEeeEEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-c
Confidence 000000000011235999999999964 3599999999999999999999999999999999999999999999965 2
Q ss_pred CCCCCHHHHhcceEEEccCCC-Ccc-ccHHHhcCcCC---CC--CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCC
Q 000504 1273 ISMIGLQDLRSRLSIIPQDPM-LFQ-GTVRTNLDPLE---QH--SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENW 1345 (1458)
Q Consensus 1273 I~~i~l~~LR~~i~iIpQdp~-LF~-gTIR~NLdp~~---~~--sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1345 (1458)
+ +++|+||++. ++. -|+++|+.... .. .+.+..++++..++.+. -.|.++ ..|
T Consensus 385 ~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~----~~L 444 (552)
T TIGR03719 385 V----------KLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGS------DQQKKV----GQL 444 (552)
T ss_pred e----------EEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChh------HhcCch----hhC
Confidence 1 6999999973 665 49999996421 11 13344566666665321 123333 469
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeC-CEEEEe
Q 000504 1346 SVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDE-GKVLEY 1423 (1458)
Q Consensus 1346 SgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~-G~ivE~ 1423 (1458)
|||||||++|||||+.+|++|+|||||++||+.+...+.+.|++. . .|||+|||+++.+.. ||+|++|++ |+++++
T Consensus 445 SgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~ 522 (552)
T TIGR03719 445 SGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHILAFEGDSHVEWF 522 (552)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEEEEEECCCeEEEe
Confidence 999999999999999999999999999999999999999999986 3 499999999999876 999999997 688754
Q ss_pred -cChhHHhh
Q 000504 1424 -DSPRQLLE 1431 (1458)
Q Consensus 1424 -g~p~~Ll~ 1431 (1458)
|++.++.+
T Consensus 523 ~g~~~~~~~ 531 (552)
T TIGR03719 523 EGNYSEYEE 531 (552)
T ss_pred CCCHHHHHH
Confidence 67666654
No 70
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.2e-59 Score=593.95 Aligned_cols=521 Identities=20% Similarity=0.232 Sum_probs=409.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 271 HAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVR 350 (1458)
Q Consensus 271 ~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~iR 350 (1458)
+.+++.++...++.++..++..+.|++++.+++.+-.... ... -+.+++++++..++..++.....+...+++.++.
T Consensus 2 ~~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (544)
T TIGR01842 2 SKNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS--VPT-LLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLD 78 (544)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc--hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777788888888999999999999999986543221 111 2334444555556666666666777888999999
Q ss_pred HHHHHHHHHHhcccccCCCCHHHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000504 351 SALTVLIYKRSMAIKFAGPSSGIIINMINVDVERIGDFFLY--IHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFV 428 (1458)
Q Consensus 351 ~~L~~~Iy~K~L~ls~~~~~~G~ivnlms~D~~ri~~~~~~--~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~ 428 (1458)
..+...+|+|.++++.. ..+...+.+++|++++.+++.. +..+...++.++..+ +++. +.|+.+++.+++++++
T Consensus 79 ~~lr~~~~~~ll~~~~~--~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~-~~~~l~li~l~~~~l~ 154 (544)
T TIGR01842 79 GALNQPIFAASFSATLR--RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLL-VCFL-LHPWIGILALGGAVVL 154 (544)
T ss_pred HHHHHHHHHHHhcCccc--CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHH-HhhHHHHHHHHHHHHH
Confidence 99999999999988763 3455677888999999987643 333444444443332 2322 2223334444433444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 429 MVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWAS 508 (1458)
Q Consensus 429 ~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~ 508 (1458)
+.+.....+..++..++.++..+++.+.++|.++|+++||.|++|+.+.++.++..++..+...+.....+....+....
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555667777888888999999999999999999999999999999999988876665554444433333332222222
Q ss_pred H--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 000504 509 P--TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKA 586 (1458)
Q Consensus 509 p--~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~ 586 (1458)
. ..+.++.++.+...++.+|++.+++++.++..+..|+..++..+..+.++++|.+|+.++++.++..+.... ...
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~--~~~ 312 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAMP--LPE 312 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCC--CCC
Confidence 1 123345677787788899999999999999999999999999999999999999999999976653221111 111
Q ss_pred CCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC------
Q 000504 587 SDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------ 659 (1458)
Q Consensus 587 ~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------ 659 (1458)
.+..++++|++|+|++. ..+.+++ |+++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 313 ~~~~i~~~~v~~~y~~~------~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i-~~~g~~i~~~ 385 (544)
T TIGR01842 313 PEGHLSVENVTIVPPGG------KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSV-RLDGADLKQW 385 (544)
T ss_pred CCCeEEEEEEEEEcCCC------CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEehhhC
Confidence 23469999999999753 3578999 99999999999999999999999999999999999987 7776
Q ss_pred -------EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHH
Q 000504 660 -------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQL 731 (1458)
Q Consensus 660 -------~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 731 (1458)
.++||||+|+++++|++|||.++.+ .+++++.++++.+++++.++.+|+|.+|.+|++|.+||||||||++|
T Consensus 386 ~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~l 465 (544)
T TIGR01842 386 DRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIAL 465 (544)
T ss_pred CHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHH
Confidence 3799999999999999999986654 77888888999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhh
Q 000504 732 ARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 732 ARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
|||++++|+++|||||||+||+++++.+.+ .+.... +++|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 466 ARall~~~~ililDEpts~LD~~~~~~i~~-~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 466 ARALYGDPKLVVLDEPNSNLDEEGEQALAN-AIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred HHHHhcCCCEEEEeCCccccCHHHHHHHHH-HHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 999999999999999999999999888866 455443 6899999999999888899999999999999999988864
No 71
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.8e-59 Score=596.44 Aligned_cols=533 Identities=19% Similarity=0.261 Sum_probs=410.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 269 IIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIR 348 (1458)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~ 348 (1458)
.++.+++.+.+..++.++..++..+.|+++..+++.+..... . +. +++.+++..++..+......+...++..+
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~---~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKGD---I--FP-LLAAWAGFGLFNIIAGVLVARHADRLAHR 86 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---H--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667778888888888999999999999999997754321 1 11 11111111222222222234456677788
Q ss_pred HHHHHHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000504 349 VRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFS 424 (1458)
Q Consensus 349 iR~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~ 424 (1458)
+|..+...+|+|.++++.. ..+.|++++.++.|++.+.+... .+..+....+..++.+++++ .++|+.+++.+++
T Consensus 87 ~~~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~l~~l~~ 165 (588)
T PRK13657 87 RRLAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLAL-FMNWRLSLVLVVL 165 (588)
T ss_pred HHHHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 8888899999999987543 33899999999999999876533 23333222222222222222 2343455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Q 000504 425 TIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLRE----IERDSLKKYLYTCSA 500 (1458)
Q Consensus 425 ~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~----~El~~l~k~~~~~a~ 500 (1458)
+++...+...+.+..++.+++.++..++......|.++|++.||.|+.|+.+.+++.+.-+ .+.+..+.......+
T Consensus 166 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (588)
T PRK13657 166 GIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVL 245 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666667778888889999999999999999999999999999999999987776655533 333322222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC-C
Q 000504 501 IAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKP-I 579 (1458)
Q Consensus 501 ~~~~~~~~p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~-~ 579 (1458)
..++ ..-..+.+++++.+.+..+.++.+.+++++.++..+..|+..+...+..+.+++.+++|+.+++..+++.+. .
T Consensus 246 ~~~~--~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~ 323 (588)
T PRK13657 246 NRAA--STITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPP 323 (588)
T ss_pred HHHH--HHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 2211 112234456678888888899999999999999999999999999999999999999999999976542111 1
Q ss_pred CCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEEC
Q 000504 580 TEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVH 658 (1458)
Q Consensus 580 ~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~ 658 (1458)
...+....+..|+++|++|+|+++ .+.|+| |+++++|++++|+|+||||||||+++|+|+++|.+|++ .++
T Consensus 324 ~~~~~~~~~~~I~~~~vsf~y~~~-------~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I-~i~ 395 (588)
T PRK13657 324 GAIDLGRVKGAVEFDDVSFSYDNS-------RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRI-LID 395 (588)
T ss_pred CCCCcCCCCCeEEEEEEEEEeCCC-------CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEE-EEC
Confidence 111111223469999999999742 468999 99999999999999999999999999999999999986 788
Q ss_pred C-------------EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChH
Q 000504 659 G-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1458)
Q Consensus 659 g-------------~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGG 724 (1458)
| .++||||+|+++++||||||.++++ .++++.+++++.+++++.+..+|+|.+|.+|++|.+||||
T Consensus 396 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgG 475 (588)
T PRK13657 396 GTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGG 475 (588)
T ss_pred CEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHH
Confidence 7 4799999999999999999999964 5677888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccch
Q 000504 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYE 804 (1458)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~ 804 (1458)
||||++||||++++|+|++||||||+||+++++.+++. +....+++|+|+|||+++.++.||+|++|++|++.+.|+++
T Consensus 476 q~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~-l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~ 554 (588)
T PRK13657 476 ERQRLAIARALLKDPPILILDEATSALDVETEAKVKAA-LDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFD 554 (588)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999988765 45555789999999999999999999999999999999999
Q ss_pred hhhhhcchHHHHHHHH
Q 000504 805 DLIADQNSELVRQMKA 820 (1458)
Q Consensus 805 ~l~~~~~~~~~~~~~~ 820 (1458)
++++ ....+.++...
T Consensus 555 ~l~~-~~~~y~~l~~~ 569 (588)
T PRK13657 555 ELVA-RGGRFAALLRA 569 (588)
T ss_pred HHHH-CCChHHHHHHH
Confidence 9987 55667766653
No 72
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.1e-59 Score=593.91 Aligned_cols=524 Identities=21% Similarity=0.264 Sum_probs=408.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000504 285 GVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLIYKRSMAI 364 (1458)
Q Consensus 285 l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~iR~~L~~~Iy~K~L~l 364 (1458)
++..++..+.|++++.+++.+..... .... .+.+++.+++..++..++.....+...+.+.++...+...+|+|.+++
T Consensus 5 ~~~~~~~~~~p~~~~~iid~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~ 82 (569)
T PRK10789 5 IIIAMLQLIPPKVVGIIVDGVTEQHM-TTGQ-ILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQ 82 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCc-chhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34555667789999999997754321 1111 233344444444455555544455566778888888888999999987
Q ss_pred ccC---CCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 365 KFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTPLANRQE 440 (1458)
Q Consensus 365 s~~---~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~~~~~~~~~~~~~ 440 (1458)
+.. ..++|+++|.+++|++.+..... .+..++..++..++++++++..++|..+++.++++++.+.+...+.+...
T Consensus 83 ~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~ 162 (569)
T PRK10789 83 HPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLH 162 (569)
T ss_pred CHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 653 34899999999999999986653 45566666666666655554456755666666666666666777778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Q 000504 441 RFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWASP--TLVSVITFG 518 (1458)
Q Consensus 441 ~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p--~~v~~~tF~ 518 (1458)
+..++..+..++..+...|.++|+++||.+++|+.+.++..+.-++..+...+.....+....+..... ..+.++.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 242 (569)
T PRK10789 163 ERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGG 242 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888889999999999999999999998777766543332222222222222211111111 123344567
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccEEEeeeEE
Q 000504 519 VCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKASDVAIDIEAGEY 598 (1458)
Q Consensus 519 ~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~I~i~~~~f 598 (1458)
.+.+.++.++.+.+++++.++..+..|+..++..+..+.+++++.+||.++++.++..+.... +....+..|+++|++|
T Consensus 243 ~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~-~~~~~~~~I~~~~v~~ 321 (569)
T PRK10789 243 SWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSE-PVPEGRGELDVNIRQF 321 (569)
T ss_pred HHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCC-CCCCCCCcEEEEEEEE
Confidence 777778899999999999999999999999999999999999999999999986542111111 1111234699999999
Q ss_pred EeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE-------------EEEE
Q 000504 599 AWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------------KAYV 664 (1458)
Q Consensus 599 sw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------------~ayv 664 (1458)
+|+.+ ..+.|++ |+++++|++++|+||||||||||+++|+|+++|++|++ .++|. ++||
T Consensus 322 ~y~~~------~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i-~~~g~~~~~~~~~~~~~~i~~v 394 (569)
T PRK10789 322 TYPQT------DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDI-RFHDIPLTKLQLDSWRSRLAVV 394 (569)
T ss_pred ECCCC------CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEE-EECCEEHhhCCHHHHHhheEEE
Confidence 99753 3578999 99999999999999999999999999999999999997 77763 6999
Q ss_pred cCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEE
Q 000504 665 PQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYI 743 (1458)
Q Consensus 665 ~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~l 743 (1458)
+|+|+++++|++|||.+|.+ .++++++++++.+++.+++..+|+|.+|.+|++|.+||||||||++||||++++|+++|
T Consensus 395 ~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~ill 474 (569)
T PRK10789 395 SQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILI 474 (569)
T ss_pred ccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999964 67788899999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhhhcchHHHHHHHH
Q 000504 744 FDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKA 820 (1458)
Q Consensus 744 LDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 820 (1458)
||||||+||+++.+++.+. +....+++|+|+|||+++.++.||+|++|++|++++.|+++++++ ....+.++...
T Consensus 475 lDEpts~LD~~~~~~i~~~-l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~-~~~~y~~l~~~ 549 (569)
T PRK10789 475 LDDALSAVDGRTEHQILHN-LRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQ-QSGWYRDMYRY 549 (569)
T ss_pred EECccccCCHHHHHHHHHH-HHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHH-cCChHHHHHHH
Confidence 9999999999999888765 555567899999999999999999999999999999999999987 55566666544
No 73
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.5e-59 Score=592.34 Aligned_cols=499 Identities=17% Similarity=0.205 Sum_probs=381.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 268 VIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVL-ASVFLFAKTVESLTQRQWYFGANRIG 346 (1458)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l-~~~l~~~~~~~~l~~~~~~~~~~r~g 346 (1458)
...+.+++.++...++.++..++..+.|++++.+++.+..... .. .+.+ ..++++..++..+......+...+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP--VL--YLSVAAVAVRAFGIGRAVFRYLERLVGHDAA 81 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch--hH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777778888888999999999999999987643221 11 1111 11111222333344333444556777
Q ss_pred HHHHHHHHHHHHHHhcccccCC---CCHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 000504 347 IRVRSALTVLIYKRSMAIKFAG---PSSGIIINMINVDVERIGDFFLYI-HRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1458)
Q Consensus 347 ~~iR~~L~~~Iy~K~L~ls~~~---~~~G~ivnlms~D~~ri~~~~~~~-~~~w~~plqi~~al~lL~~~lG~~a~l~gl 422 (1458)
.++...+...+|+|.++++... .++|+++|.++.|++++.+++... ..+....+.+++++++++. ++|..+++.+
T Consensus 82 ~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~l~~l 160 (529)
T TIGR02868 82 LRSLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIAL-LSVPAALVLA 160 (529)
T ss_pred HHHHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHH
Confidence 8888888899999999887642 389999999999999999886643 3344444444444444442 3334444444
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 423 FSTIFVMVSNTPL-ANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAI 501 (1458)
Q Consensus 423 ~~~~i~~~~~~~~-~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~ 501 (1458)
+.++++..+...+ .+..++..++..+..++..+...|.++|+++||.+++|+.+.++.++..++..+...+.....+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (529)
T TIGR02868 161 AGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLG 240 (529)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433333333233 344455667777888999999999999999999999999999999887666555555544444433
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 000504 502 AFLFWASPT--LVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPI 579 (1458)
Q Consensus 502 ~~~~~~~p~--~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~ 579 (1458)
..+...... .+.++.++.+.+.++.++.+.+.+++.+...+..|+..++..+..+.++++|.+|+.++++.+++.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 320 (529)
T TIGR02868 241 AAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEG 320 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCC
Confidence 333222222 223345666777788899999999999999999999999999999999999999999999776521111
Q ss_pred C-C--CCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEE
Q 000504 580 T-E--PTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAI 655 (1458)
Q Consensus 580 ~-~--~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i 655 (1458)
+ . .+.......|+++|++|+|+++ ++.|+| |+++++||+++|+||+|||||||+++|+|+++|++|++
T Consensus 321 ~~~~~~~~~~~~~~I~~~~vsf~Y~~~-------~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I- 392 (529)
T TIGR02868 321 VVPAAGALGLGKPTLELRDLSFGYPGS-------PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEV- 392 (529)
T ss_pred CCCCCcccCCCCceEEEEEEEEecCCC-------CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE-
Confidence 1 0 0011123469999999999753 358999 99999999999999999999999999999999999997
Q ss_pred EECC------------EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCC
Q 000504 656 KVHG------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1458)
Q Consensus 656 ~~~g------------~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LS 722 (1458)
.++| .++||||+|++|++||||||.+|.+ .++++++++++.|+++++++.+|+|.+|.+||+|.+||
T Consensus 393 ~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LS 472 (529)
T TIGR02868 393 TLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLS 472 (529)
T ss_pred EECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCC
Confidence 8988 6899999999999999999999865 57889999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEeccc
Q 000504 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQL 780 (1458)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~ 780 (1458)
||||||++||||++++|+|++|||||||||+++++.+.+. +....+++|+|+|||++
T Consensus 473 GGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~-l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 473 GGERQRLALARALLADAPILLLDEPTEHLDAGTESELLED-LLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999888775 45566789999999985
No 74
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-58 Score=587.68 Aligned_cols=537 Identities=20% Similarity=0.248 Sum_probs=405.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 269 IIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLS-GKHDHS-SYHYGLVLASVFLFAKTVESLTQRQWYFGANRIG 346 (1458)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~-~~~~~~-~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g 346 (1458)
..+.+++.+++..++.++..++..+.|.++..+++... .+.... ... .+..++++++..++..++.....+...+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFN-YMLPAAGVRGAAIGRTAGRYGERLVSHDAT 88 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888889999999999999999998542 211000 011 111122233333444555555556677888
Q ss_pred HHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 000504 347 IRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1458)
Q Consensus 347 ~~iR~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~~-~~~~w~~plqi~~al~lL~~~lG~~a~l~gl 422 (1458)
.++...+...+|+|.++++.. ...+|++++.++.|++++.+++.. +..+....+.+++++++++. +.|..++..+
T Consensus 89 ~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~l~~~ 167 (574)
T PRK11160 89 FRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSF-FDLTLALTLG 167 (574)
T ss_pred HHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 889999999999999988653 238999999999999999998754 44445455555544444442 3323334333
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 423 FSTIFVM-VSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAI 501 (1458)
Q Consensus 423 ~~~~i~~-~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~ 501 (1458)
+++++.. .+...+.+..++..++..+..++..+.+.|.++|+++||.|+.|+.+.+++++..++-.+...+.....+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
T PRK11160 168 GILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLS 247 (574)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222222 233455677778888888888999999999999999999999999988888776554444333333333322
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 000504 502 AFLFWASP--TLVSVITFGVCILLKTPLTSGAVLSALATFRI-LQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKP 578 (1458)
Q Consensus 502 ~~~~~~~p--~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~-l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~ 578 (1458)
..+..... ..+.++.++.+. .++.++.+..++++.+..+ ...|+..++..+..+.++++|.+||.++++.++..+.
T Consensus 248 ~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~ 326 (574)
T PRK11160 248 QALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTF 326 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 22222111 122233455555 4677888887776665433 3568888999999999999999999999987542111
Q ss_pred CCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEE
Q 000504 579 ITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKV 657 (1458)
Q Consensus 579 ~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~ 657 (1458)
....+.......|+++|++|+|+++ ..+.|+| |+++++||+++|+||||||||||+++|+|+++|++|++ .+
T Consensus 327 ~~~~~~~~~~~~i~~~~v~f~y~~~------~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I-~i 399 (574)
T PRK11160 327 PTTSTAAADQVSLTLNNVSFTYPDQ------PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEI-LL 399 (574)
T ss_pred CcccCCCCCCCeEEEEEEEEECCCC------CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EE
Confidence 1111111223469999999999753 2478999 99999999999999999999999999999999999997 88
Q ss_pred CCE-------------EEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCCh
Q 000504 658 HGK-------------KAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1458)
Q Consensus 658 ~g~-------------~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSG 723 (1458)
+|. ++||+|+|+++++||+|||.+|.+ .++++..++++.++++++++. |+|.+|.+||+|.+|||
T Consensus 400 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSg 478 (574)
T PRK11160 400 NGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSG 478 (574)
T ss_pred CCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCH
Confidence 873 699999999999999999999975 577888999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccc
Q 000504 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKY 803 (1458)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~ 803 (1458)
|||||++||||++++|++++||||||+||+++++.+.+ .+....+++|+|+|||+++.++.||+|++|++|++++.|++
T Consensus 479 GqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~-~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~ 557 (574)
T PRK11160 479 GEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILE-LLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTH 557 (574)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCH
Confidence 99999999999999999999999999999999888866 45566678999999999999999999999999999999999
Q ss_pred hhhhhhcchHHHHHH
Q 000504 804 EDLIADQNSELVRQM 818 (1458)
Q Consensus 804 ~~l~~~~~~~~~~~~ 818 (1458)
+|+++ .++.+.++.
T Consensus 558 ~~l~~-~~g~y~~l~ 571 (574)
T PRK11160 558 QELLA-QQGRYYQLK 571 (574)
T ss_pred HHHHh-cCcHHHHHH
Confidence 99997 566665544
No 75
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.4e-61 Score=538.92 Aligned_cols=457 Identities=27% Similarity=0.418 Sum_probs=344.9
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC-----CCCcEEEECC---
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG--- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g--- 659 (1458)
..++++|.+.++.... ......++ +|++.+||.+|+||++|||||-..++++|+++. -+|++ ..+|
T Consensus 5 ~lL~v~nLsV~f~~~~----~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i-~f~G~dl 79 (534)
T COG4172 5 PLLSIRNLSVAFHQEG----GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSI-LFDGEDL 79 (534)
T ss_pred cceeeeccEEEEecCC----cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCcccee-EEcChhh
Confidence 4578888777776431 24567889 999999999999999999999999999999975 34554 5554
Q ss_pred --------------EEEEEcCCCCC-CC--CcHHHHHh----cCCCCCH----HHHHHHHHHhhhhhhHHhhcCCCcccc
Q 000504 660 --------------KKAYVPQSSWI-QT--GTIRENIL----FGKDMRQ----SFYEEVLEGCALNQDIEMWADGDLSVV 714 (1458)
Q Consensus 660 --------------~~ayv~Q~~~i-~~--~Ti~enI~----fg~~~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~i 714 (1458)
+|++++|+|-- .| -||...|. ..+.... ++.-+.++..++.+ -...+
T Consensus 80 l~~se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~--------p~~rl 151 (534)
T COG4172 80 LAASERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPE--------PEKRL 151 (534)
T ss_pred hcCCHHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCc--------hhhhh
Confidence 58999999863 23 36655543 3333322 11122222222211 11234
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEE
Q 000504 715 GERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLV 791 (1458)
Q Consensus 715 g~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~ 791 (1458)
....++|||||||||.||.||..+||++|-||||.|||..+..+|.+ +++.+. .|-.++++|||+..... ||+|+|
T Consensus 152 ~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~-Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~V 230 (534)
T COG4172 152 DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILD-LLKELQAELGMAILFITHDLGIVRKFADRVYV 230 (534)
T ss_pred hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHH-HHHHHHHHhCcEEEEEeccHHHHHHhhhhEEE
Confidence 56788999999999999999999999999999999999999999986 455443 37899999999999986 999999
Q ss_pred EeCCeEEEcccchhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhh
Q 000504 792 MKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTE 871 (1458)
Q Consensus 792 l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 871 (1458)
|.+|++++.|+.+++...+...+.+.+-+
T Consensus 231 M~~G~ivE~~~t~~lF~~PqHpYTr~Ll~--------------------------------------------------- 259 (534)
T COG4172 231 MQHGEIVETGTTETLFAAPQHPYTRKLLA--------------------------------------------------- 259 (534)
T ss_pred EeccEEeecCcHHHHhhCCCChHHHHHHh---------------------------------------------------
Confidence 99999999998777765221111111000
Q ss_pred cCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 000504 872 LGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLL 951 (1458)
Q Consensus 872 ~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~ 951 (1458)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000504 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1458)
Q Consensus 952 ~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~ 1031 (1458)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 000504 1032 LFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTME 1111 (1458)
Q Consensus 1032 v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1111 (1458)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCcc
Q 000504 1112 WLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPL 1191 (1458)
Q Consensus 1112 wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1191 (1458)
.|+.
T Consensus 260 ---------------------------------------------------------------------------aeP~- 263 (534)
T COG4172 260 ---------------------------------------------------------------------------AEPS- 263 (534)
T ss_pred ---------------------------------------------------------------------------cCCC-
Confidence 0110
Q ss_pred ccCCCCCCCCCCCCccEEEEeeeEEeCCC---------CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCC
Q 000504 1192 VIKNSRPSPEWPSSGKIELENLLVQYNPT---------LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS 1262 (1458)
Q Consensus 1192 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~---------~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~ 1262 (1458)
...+|..-...--++.+||.+.|+-. .-.+.+||||+.++||.+||||+||||||||-.+|+|++++.
T Consensus 264 ---g~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~ 340 (534)
T COG4172 264 ---GDPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ 340 (534)
T ss_pred ---CCCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC
Confidence 00111100111236677777776321 124789999999999999999999999999999999999876
Q ss_pred CcEEEEcCeeCCCCCHHH---HhcceEEEccCCC--Ccc-ccHHHhcC-------cC--CCCCHHHHHHHHHHcCcHHHH
Q 000504 1263 GGRILIDGVDISMIGLQD---LRSRLSIIPQDPM--LFQ-GTVRTNLD-------PL--EQHSDQEIWEVINKCHLAEIV 1327 (1458)
Q Consensus 1263 ~G~I~IDG~dI~~i~l~~---LR~~i~iIpQdp~--LF~-gTIR~NLd-------p~--~~~sdeeI~~aL~~~~L~~~i 1327 (1458)
|+|.++|.||...+.++ +|+++-+|.|||+ |=. -||-+-+. |. ....|+.+.+||+.+||+.-.
T Consensus 341 -G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~ 419 (534)
T COG4172 341 -GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPAT 419 (534)
T ss_pred -ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhH
Confidence 99999999999988776 6899999999996 211 24444432 11 112356789999999997654
Q ss_pred HhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhh
Q 000504 1328 RQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPT 1405 (1458)
Q Consensus 1328 ~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~t 1405 (1458)
... -...+|||||||++||||+.-+|++++||||||+||..-.++|.+.+++.. .+-+-++|+|++..
T Consensus 420 r~R----------YPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~V 489 (534)
T COG4172 420 RNR----------YPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAV 489 (534)
T ss_pred hhc----------CCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHH
Confidence 321 234699999999999999999999999999999999999999999998754 46799999999999
Q ss_pred hhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHHH
Q 000504 1406 VID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKL 1440 (1458)
Q Consensus 1406 i~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l 1440 (1458)
++. ||+|+||.+|+|||+|+.+++++++...|.+-
T Consensus 490 vrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 490 VRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTRA 525 (534)
T ss_pred HHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHHH
Confidence 976 99999999999999999999999998777543
No 76
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-60 Score=607.71 Aligned_cols=200 Identities=21% Similarity=0.336 Sum_probs=167.8
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .+++
T Consensus 312 ~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ig 378 (638)
T PRK10636 312 LLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKLG 378 (638)
T ss_pred eEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999741 2699
Q ss_pred EEccCC--CCcc-ccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccC
Q 000504 1287 IIPQDP--MLFQ-GTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKK 1362 (1458)
Q Consensus 1287 iIpQdp--~LF~-gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~ 1362 (1458)
|+||++ .+.. .|+.+++... ....++++.+.|+..++.+. -.+.++ ..||||||||++|||+++++
T Consensus 379 y~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~------~~~~~~----~~LSgGekqRl~La~~l~~~ 448 (638)
T PRK10636 379 YFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGD------KVTEET----RRFSGGEKARLVLALIVWQR 448 (638)
T ss_pred EecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChh------HhcCch----hhCCHHHHHHHHHHHHHhcC
Confidence 999985 3443 3788876422 22345567778888877421 123344 46999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEE-EecChhHHhh
Q 000504 1363 KRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVL-EYDSPRQLLE 1431 (1458)
Q Consensus 1363 ~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~iv-E~g~p~~Ll~ 1431 (1458)
|++|||||||++||..+...+.+.|++. +.|||+|||++..+.. ||+|++|++|+++ ..|++++..+
T Consensus 449 p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 449 PNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 9999999999999999999999999885 4599999999999875 9999999999998 6788888753
No 77
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2e-58 Score=598.48 Aligned_cols=540 Identities=19% Similarity=0.227 Sum_probs=426.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 266 PQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRI 345 (1458)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~ 345 (1458)
++..++.+++.+....+..++..++.++.|++++.+++.+-.... ... -+.+++++++..++..++.....+...++
T Consensus 130 ~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~--~~~-l~~l~~~~~~~~~~~~~~~~l~~~~~~~~ 206 (694)
T TIGR01846 130 FIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG--LST-LSVLALAMLAVAIFEPALGGLRTYLFAHL 206 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455667777777888888888899999999999987643221 111 23334444445555556655566677788
Q ss_pred HHHHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000504 346 GIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAA 421 (1458)
Q Consensus 346 g~~iR~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~g 421 (1458)
+.++...+...+|+|.++++.. .+++|+++|.+ .|++.+.+++. .+..+....+.+++.+++++. ++|+.+++.
T Consensus 207 ~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~li~ 284 (694)
T TIGR01846 207 TSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFF-YSPTLTGVV 284 (694)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 8999999999999999988653 34999999999 59999998764 333333333333444444443 343556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 422 LFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAI 501 (1458)
Q Consensus 422 l~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~ 501 (1458)
++++++...+...+.+..++..++.++..+++.+.+.|.++|+++||.++.|+.+.++..+.-++..+...+.....+..
T Consensus 285 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (694)
T TIGR01846 285 IGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIA 364 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666667777888888888888999999999999999999999999999988888777555554444443333333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 000504 502 AFLFWASP--TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPI 579 (1458)
Q Consensus 502 ~~~~~~~p--~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~ 579 (1458)
........ ..+.++.+|.+.+..+.++.+.++++..+...+..|+..+...+..+.+++++++|+.++++.+++.+..
T Consensus 365 ~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 444 (694)
T TIGR01846 365 GQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA 444 (694)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC
Confidence 22222222 1233456778877888999999999999999999999999999999999999999999999876522211
Q ss_pred CCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEEC
Q 000504 580 TEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVH 658 (1458)
Q Consensus 580 ~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~ 658 (1458)
...+....+..|+++|++|+|+++ ..+.|++ |+++++||+++|+|+||||||||+++|+|+++|++|++ .++
T Consensus 445 ~~~~~~~~~~~i~~~~vsf~y~~~------~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I-~id 517 (694)
T TIGR01846 445 GLAALPELRGAITFENIRFRYAPD------SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQV-LVD 517 (694)
T ss_pred CCCCCCCCCCeEEEEEEEEEcCCC------CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EEC
Confidence 111111223569999999999754 3468999 99999999999999999999999999999999999997 888
Q ss_pred CE-------------EEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChH
Q 000504 659 GK-------------KAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1458)
Q Consensus 659 g~-------------~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGG 724 (1458)
|. ++||+|+|+++++||+|||.++.+ .++++..++++.+++.+.++.+|+|.+|.+|++|.+||||
T Consensus 518 g~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgG 597 (694)
T TIGR01846 518 GVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGG 597 (694)
T ss_pred CEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHH
Confidence 73 699999999999999999999864 6678888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccch
Q 000504 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYE 804 (1458)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~ 804 (1458)
||||++||||++++|+++|||||||+||+++.+.+.+. +....+++|+|++||+++.++.||+|++|++|+|++.|+++
T Consensus 598 q~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~ 676 (694)
T TIGR01846 598 QRQRIAIARALVGNPRILIFDEATSALDYESEALIMRN-MREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHE 676 (694)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHH
Confidence 99999999999999999999999999999998888764 55556789999999999999999999999999999999999
Q ss_pred hhhhhcchHHHHHHH
Q 000504 805 DLIADQNSELVRQMK 819 (1458)
Q Consensus 805 ~l~~~~~~~~~~~~~ 819 (1458)
++++ .++.+.++..
T Consensus 677 ~l~~-~~~~y~~l~~ 690 (694)
T TIGR01846 677 ELLA-LQGLYARLWQ 690 (694)
T ss_pred HHHH-cCChHHHHHH
Confidence 9998 5566766654
No 78
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2.5e-57 Score=575.85 Aligned_cols=532 Identities=17% Similarity=0.271 Sum_probs=411.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 269 IIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIR 348 (1458)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~ 348 (1458)
.++.+++.+++..++.++..++..+.|++++.+++.+..... .. .+ ++.+++..++..+...-+.+...++..+
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~---~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD---VL-PT--LALWAGFGVFNTIAYVLVAREADRLAHG 86 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---HH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456678888888888899999999999999999997654321 11 11 1111122233333333344556788888
Q ss_pred HHHHHHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000504 349 VRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFS 424 (1458)
Q Consensus 349 iR~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~ 424 (1458)
+|..+...+|+|.++++.. .+++|++++.++.|++.+.+++. .+..+....+.+++.+++++. +.|..++..+++
T Consensus 87 ~~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~li~l~~ 165 (585)
T TIGR01192 87 RRATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFA-MDWRLSIVLMVL 165 (585)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 9999999999999988653 34899999999999999987654 333444455555444444432 343555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q 000504 425 TIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERD----SLKKYLYTCSA 500 (1458)
Q Consensus 425 ~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~----~l~k~~~~~a~ 500 (1458)
+++...+...+.++.++.+++..+..++..+.+.|.++|+++||.++.|+.+.+++.+.-++-.+ ..+.......+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (585)
T TIGR01192 166 GILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGL 245 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556666777788888888888888999999999999999999999999888777665433222 22221122122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-CCCC
Q 000504 501 IAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQ-KKPI 579 (1458)
Q Consensus 501 ~~~~~~~~p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~-~~~~ 579 (1458)
..++... ..+.++.++.+.+..+.++.+.+++++.++..+..|+..++..+..+.+++++++|+.++++.++. ++..
T Consensus 246 ~~~~~~~--~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~ 323 (585)
T TIGR01192 246 NRMASTI--SMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPA 323 (585)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCc
Confidence 2111111 123345677777788899999999999999999999999999999999999999999999976542 1111
Q ss_pred CCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEEC
Q 000504 580 TEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVH 658 (1458)
Q Consensus 580 ~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~ 658 (1458)
...+.......++++|++|+|+++ .+.+++ |+++++|++++|+||||||||||+++|+|+++|++|++ .++
T Consensus 324 ~~~~~~~~~~~i~~~~v~~~y~~~-------~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i-~~~ 395 (585)
T TIGR01192 324 DAPELPNVKGAVEFRHITFEFANS-------SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQI-LID 395 (585)
T ss_pred cCCCCCCCCCeEEEEEEEEECCCC-------CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEE-EEC
Confidence 111111123469999999999753 357999 99999999999999999999999999999999999987 777
Q ss_pred C-------------EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChH
Q 000504 659 G-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1458)
Q Consensus 659 g-------------~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGG 724 (1458)
| .++||+|+|+++++|++|||.+|.+ .++++.+++++.+++.+.+..+|+|.+|.+|++|.+||||
T Consensus 396 g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgG 475 (585)
T TIGR01192 396 GIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGG 475 (585)
T ss_pred CEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHH
Confidence 6 3699999999999999999999864 4566777888888888889999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccch
Q 000504 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYE 804 (1458)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~ 804 (1458)
||||++||||++++|+++|||||||+||+++++.+.+ .+....+++|+|+|||+++.++.||+|++|++|++++.|+++
T Consensus 476 q~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~-~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~ 554 (585)
T TIGR01192 476 ERQRLAIARAILKNAPILVLDEATSALDVETEARVKN-AIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQ 554 (585)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHH-HHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHH
Confidence 9999999999999999999999999999999888765 456666789999999999999999999999999999999999
Q ss_pred hhhhhcchHHHHHHH
Q 000504 805 DLIADQNSELVRQMK 819 (1458)
Q Consensus 805 ~l~~~~~~~~~~~~~ 819 (1458)
++.+ +++.+.++..
T Consensus 555 ~l~~-~~~~y~~l~~ 568 (585)
T TIGR01192 555 ELIQ-KDGRFYKLLR 568 (585)
T ss_pred HHHH-CCChHHHHHH
Confidence 9987 5566666554
No 79
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.1e-57 Score=575.29 Aligned_cols=506 Identities=21% Similarity=0.251 Sum_probs=386.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 274 WKSLALNAAFAGVNTIASYIGPFLITNFVSFLS-GKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSA 352 (1458)
Q Consensus 274 ~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~-~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~iR~~ 352 (1458)
|+.+++..++.++..++..+.|+++..+++.+. +... ... -+.+++.+++..++..++.....+...+++.++...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP--LAE-LLPALGALALAVLLRALLGWLGERAAARAAAAVKSQ 78 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777888888999999999999999999773 3221 111 222333344444445555555556677778888888
Q ss_pred HHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000504 353 LTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFV 428 (1458)
Q Consensus 353 L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~ 428 (1458)
+...+|+|.++++.. ..++|+++|.++.|++++.+++. .+..+....+.+++++++++. ++|+.+++.++.+++.
T Consensus 79 lr~~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~~~~l~~~~l~ 157 (529)
T TIGR02857 79 LRERLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFP-ADWISGLILLLTAPLI 157 (529)
T ss_pred HHHHHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHH
Confidence 888889998887543 33899999999999999998764 355666555555555544442 2323334433333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 429 MVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWAS 508 (1458)
Q Consensus 429 ~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~ 508 (1458)
..+...+.++.++..++.++..+++.+.+.|.++|+++||.|++|+.+.+++.+.-++..+...+..........+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (529)
T TIGR02857 158 PIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELF 237 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445567777777888889999999999999999999999999999888887654333322222222222221111111
Q ss_pred HHHH--HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 000504 509 PTLV--SVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKA 586 (1458)
Q Consensus 509 p~~v--~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~ 586 (1458)
..+. .++.++.+.+..+.++.+.+++++.+...+..|+..+...+..+.+++++++|+.++++.++........+ ..
T Consensus 238 ~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~~~~-~~ 316 (529)
T TIGR02857 238 ATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKAPVT-AA 316 (529)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCCC-CC
Confidence 1111 11233444455778999999999999999999999999999999999999999999997543211111111 11
Q ss_pred CCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE-----
Q 000504 587 SDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK----- 660 (1458)
Q Consensus 587 ~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~----- 660 (1458)
....|+++|++|+|++. +++.++| |+++++|++++|+||+|||||||+++|+|+++|++|++ .++|.
T Consensus 317 ~~~~i~~~~v~f~y~~~------~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I-~~~g~~i~~~ 389 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGR------RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSI-AVNGVPLADA 389 (529)
T ss_pred CCCeEEEEEEEEECCCC------CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE-EECCEehhhC
Confidence 12469999999999754 3478999 99999999999999999999999999999999999987 78774
Q ss_pred --------EEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHH
Q 000504 661 --------KAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQL 731 (1458)
Q Consensus 661 --------~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 731 (1458)
++||+|+|+++++||+|||.+|.+ .++++.+++++.+++.++++.+|+|.+|.+||+|.+||||||||++|
T Consensus 390 ~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~l 469 (529)
T TIGR02857 390 DADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLAL 469 (529)
T ss_pred CHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHH
Confidence 799999999999999999999865 56788899999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEE
Q 000504 732 ARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVM 792 (1458)
Q Consensus 732 ARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l 792 (1458)
|||++++|++++||||||+||+++.+.+++. +....+++|+|+|||+++.+..||+|++|
T Consensus 470 aRal~~~~~ililDE~ts~lD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 470 ARAFLRDAPLLLLDEPTAHLDAETEALVTEA-LRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999999999988764 55566789999999999999999999985
No 80
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.8e-57 Score=575.64 Aligned_cols=530 Identities=26% Similarity=0.362 Sum_probs=409.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 273 VWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSA 352 (1458)
Q Consensus 273 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~iR~~ 352 (1458)
++ .+....++.++..++....|.++..+++.+.. .. .. ...+...+++..++..++.....+....++.++...
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~--~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 86 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA-DL--GE--LLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVAD 86 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hH--HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 77888888888999999999999999987761 11 11 111111122222233333333445555666788888
Q ss_pred HHHHHHHHhcccccC--CC-CHHHHHHHHHhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000504 353 LTVLIYKRSMAIKFA--GP-SSGIIINMINVDVERIGDFFLYIHRIWL-LPVQVFLALVILYKNLGAAPAFAALFSTIFV 428 (1458)
Q Consensus 353 L~~~Iy~K~L~ls~~--~~-~~G~ivnlms~D~~ri~~~~~~~~~~w~-~plqi~~al~lL~~~lG~~a~l~gl~~~~i~ 428 (1458)
+...+|+|.++++.. .+ ..|++++.++.|++.+...+........ .++-++..++++ ..++|..++..+++.+++
T Consensus 87 lr~~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~l~~~~~~~~~ 165 (567)
T COG1132 87 LRRDLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLL-FSLSWRLALILLLILPLL 165 (567)
T ss_pred HHHHHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHH
Confidence 888889999988732 22 7899999999999999998876533222 333333333333 345544555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 000504 429 MVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIA-FLFWA 507 (1458)
Q Consensus 429 ~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~-~~~~~ 507 (1458)
......+.++.++...+..+..++..+.+.|.++|+++||.++.|+...++..+..+...+...+.....+... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (567)
T COG1132 166 ALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLL 245 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666667666888888888999999999999999999999999998766665554433333222222222222 11111
Q ss_pred HH-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-CCCCCCCCCC
Q 000504 508 SP-TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQ-KKPITEPTSK 585 (1458)
Q Consensus 508 ~p-~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~-~~~~~~~~~~ 585 (1458)
.. ....++.++.+.+..+.++.+.+.+++.++..+..|+..+...+..+.++..|.+|+.++++.++. .+.... ..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--~~ 323 (567)
T COG1132 246 SSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP--LK 323 (567)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC--CC
Confidence 11 223334456666667779999999999999999999999999999999999999999999998652 221111 12
Q ss_pred CCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC-----
Q 000504 586 ASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG----- 659 (1458)
Q Consensus 586 ~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g----- 659 (1458)
..+..|+++|++|+|+++ .+.++| ||++++||++|||||+|||||||+++|+|.++|++|++ .++|
T Consensus 324 ~~~~~I~f~~vsf~y~~~-------~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I-~idg~dI~~ 395 (567)
T COG1132 324 DTIGSIEFENVSFSYPGK-------KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEI-LIDGIDIRD 395 (567)
T ss_pred CCCCeEEEEEEEEEcCCC-------CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeE-EECCEehhh
Confidence 233469999999999853 589999 99999999999999999999999999999999999997 7777
Q ss_pred --------EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHH
Q 000504 660 --------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1458)
Q Consensus 660 --------~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 730 (1458)
+++||||+|++|++||+|||.+|++ .++++..++++.+++.+.++.+|+|.+|.+||+|.+||||||||++
T Consensus 396 i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrla 475 (567)
T COG1132 396 ISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLA 475 (567)
T ss_pred cCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHH
Confidence 3699999999999999999999988 5777888888888899999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhhhc
Q 000504 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQ 810 (1458)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~ 810 (1458)
||||+++||+|++||||||+||+++.+.+.+. +....++||+|+|+|+++.+..||+|+||++|+|++.|+++|+++ .
T Consensus 476 iARall~~~~ILILDEaTSalD~~tE~~I~~~-l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~-~ 553 (567)
T COG1132 476 IARALLRNPPILILDEATSALDTETEALIQDA-LKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLA-K 553 (567)
T ss_pred HHHHHhcCCCEEEEeccccccCHHhHHHHHHH-HHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHH-c
Confidence 99999999999999999999999998888765 445557899999999999999999999999999999999999998 5
Q ss_pred chHHHHHHHHh
Q 000504 811 NSELVRQMKAH 821 (1458)
Q Consensus 811 ~~~~~~~~~~~ 821 (1458)
++.+.++...+
T Consensus 554 ~g~y~~l~~~~ 564 (567)
T COG1132 554 GGLYARLYQAQ 564 (567)
T ss_pred CCHHHHHHHHh
Confidence 77777776543
No 81
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.8e-59 Score=596.60 Aligned_cols=200 Identities=24% Similarity=0.369 Sum_probs=166.4
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +++
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 4899999999964 35999999999999999999999999999999999999999999999 4332 699
Q ss_pred EEccCC-CCccc-cHHHhcCcC-CCC--C--HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1287 IIPQDP-MLFQG-TVRTNLDPL-EQH--S--DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1287 iIpQdp-~LF~g-TIR~NLdp~-~~~--s--deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
|+||++ .++.. |+++|+... ... . +.++.+.|+..++.. +..+.++ ..||||||||++||||+
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LSgGekqRl~la~al 455 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHP------KRAMTPV----KALSGGERNRLLLARLF 455 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCH------HHHhChh----hhCCHHHHHHHHHHHHH
Confidence 999986 46655 999999642 111 1 445666677766632 1124444 35999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEe-CCEEEEe-cChhHHhh
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLD-EGKVLEY-DSPRQLLE 1431 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~-~G~ivE~-g~p~~Ll~ 1431 (1458)
+++|++|||||||++||..+...+.+.|++. ++|||+|||+.+.+.. ||+|++|+ +|++.++ |++++.++
T Consensus 456 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 456 LKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 9999999999999999999999999999875 5699999999999865 99999998 8999886 56766643
No 82
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-56 Score=532.18 Aligned_cols=523 Identities=22% Similarity=0.296 Sum_probs=402.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 279 LNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLIY 358 (1458)
Q Consensus 279 ~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~iR~~L~~~Iy 358 (1458)
+.+++..+..++...+-+++-.+++-+-..+. ... -+.++++++++.++.+++.---....+|.+.++|..+...++
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~--~~~-l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l 80 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQL--FQS-LLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVL 80 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666666777777666654433221 111 233444555555556655544455677889999999999999
Q ss_pred HHhcccccCC---CCHHHHHHHHHhhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000504 359 KRSMAIKFAG---PSSGIIINMINVDVERIGDFFL----YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVS 431 (1458)
Q Consensus 359 ~K~L~ls~~~---~~~G~ivnlms~D~~ri~~~~~----~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~~~~ 431 (1458)
+|..+++... ..+|++.++++.-++.+..++. .+...-..|+-+.++++.+.+.-| ++-++++.++..+
T Consensus 81 ~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aa----lIllit~PlIPlf 156 (559)
T COG4988 81 DKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAA----LILLITAPLIPLF 156 (559)
T ss_pred HHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH----HHHHHHHHHHHHH
Confidence 9999887432 3889999999999998877653 333444567777777777765444 4444444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 432 NTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKL----LRLREIERDSLKKYLYTCSAIAFLFWA 507 (1458)
Q Consensus 432 ~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I----~~~R~~El~~l~k~~~~~a~~~~~~~~ 507 (1458)
.+.+++..++..++.++.-..=-...-+-|+|+-++|.|+-.+...++| ++.|+.-++.+|-.....++.-++...
T Consensus 157 Milvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~l 236 (559)
T COG4988 157 MILVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYL 236 (559)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666666666665555566778899999999999877665555 567888888887655544444433332
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-CCCCCC-CCC
Q 000504 508 SPTLVSVITFGVCILLK-TPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQ-KKPITE-PTS 584 (1458)
Q Consensus 508 ~p~~v~~~tF~~~~~~~-~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~-~~~~~~-~~~ 584 (1458)
+ +.+ ++.+...-+.+ ++++-...|.+|-+-.-.-.|++.+...+..-.++..+.+++..|++.++. .+..+. ...
T Consensus 237 s-iAl-vAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~ 314 (559)
T COG4988 237 S-IAL-VAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVA 314 (559)
T ss_pred H-HHH-HHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccc
Confidence 2 222 23344444556 599999999999998899999999999999999999999999999998873 222211 111
Q ss_pred CCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----
Q 000504 585 KASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---- 659 (1458)
Q Consensus 585 ~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---- 659 (1458)
......+..+|.+|.|++. ++.+++ |+++++|++++|+|+||||||||+++|+|+.+|++|++ .++|
T Consensus 315 ~~~~~ei~~~~l~~~y~~g-------~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I-~vng~~l~ 386 (559)
T COG4988 315 NEPPIEISLENLSFRYPDG-------KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEI-RVNGIDLR 386 (559)
T ss_pred cCCCceeeecceEEecCCC-------CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceE-EECCcccc
Confidence 1223345556999999864 388999 99999999999999999999999999999999999986 8886
Q ss_pred ---------EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 660 ---------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 660 ---------~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
+++||+|+|.++.+||||||+++++ -+++...++++..+|.+.++. |+|.+|.+||+|.+|||||+|||
T Consensus 387 ~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRl 465 (559)
T COG4988 387 DLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRL 465 (559)
T ss_pred ccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHH
Confidence 3799999999999999999999998 557788899999999999888 99999999999999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhhh
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIAD 809 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 809 (1458)
+||||+++++++|||||||++||+++++.+. +.+..+.++||+|+|||+++.+..+|+|++|++|+++++|+++++.+
T Consensus 466 aLARAll~~~~l~llDEpTA~LD~etE~~i~-~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~- 543 (559)
T COG4988 466 ALARALLSPASLLLLDEPTAHLDAETEQIIL-QALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSE- 543 (559)
T ss_pred HHHHHhcCCCCEEEecCCccCCCHhHHHHHH-HHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhh-
Confidence 9999999999999999999999999976664 56777778999999999999999999999999999999999999988
Q ss_pred cchHHHHHHHHh
Q 000504 810 QNSELVRQMKAH 821 (1458)
Q Consensus 810 ~~~~~~~~~~~~ 821 (1458)
+++-+.+++..+
T Consensus 544 ~~~~y~~l~~~q 555 (559)
T COG4988 544 KQGLYANLLKQQ 555 (559)
T ss_pred cCcHHHHHHHHH
Confidence 666777776543
No 83
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=5.3e-58 Score=584.85 Aligned_cols=199 Identities=22% Similarity=0.294 Sum_probs=165.4
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
..|+++|++++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ +.++
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 469999999999643 4599999999999999999999999999999999999999999999875 3479
Q ss_pred EEEccCCCCccccHHHhcC-----cCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhc
Q 000504 1286 SIIPQDPMLFQGTVRTNLD-----PLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLL 1360 (1458)
Q Consensus 1286 ~iIpQdp~LF~gTIR~NLd-----p~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1360 (1458)
+|+||++. ...++.+|.. .+...+++++.++|+..++.+.. .+.+ ...||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~------~~~~----~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNL------ALQP----MYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHH------hcCC----ccccCHHHHHHHHHHHHHh
Confidence 99999973 2224444421 12234677888899998885321 1222 3469999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEE-EecChhHH
Q 000504 1361 KKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVL-EYDSPRQL 1429 (1458)
Q Consensus 1361 r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~iv-E~g~p~~L 1429 (1458)
++|++|||||||++||+.+...+.+.|++. + .|||+|||+++.+.. ||+|++|++|+++ ..|++.+.
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 999999999999999999999999998874 3 599999999999976 9999999999998 45777664
No 84
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=3.2e-58 Score=561.91 Aligned_cols=485 Identities=23% Similarity=0.330 Sum_probs=344.3
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--EEEEEcC
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--KKAYVPQ 666 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--~~ayv~Q 666 (1458)
.|.++|++++|.. .+.+++ |+++.+|+++||||+|||||||||++|.|++.|++|++ ...+ +++|++|
T Consensus 3 ~i~~~~ls~~~g~--------~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i-~~~~~~~v~~l~Q 73 (530)
T COG0488 3 MITLENLSLAYGD--------RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEV-TRPKGLRVGYLSQ 73 (530)
T ss_pred eEEEeeeEEeeCC--------ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeE-eecCCceEEEeCC
Confidence 4788999999953 478899 99999999999999999999999999999999999997 5554 7999999
Q ss_pred CCCCCC-CcHHHHHhcCCCCCH---HHHHHHHH---------------------HhhhhhhHHhhcCCC-cccccCCCCC
Q 000504 667 SSWIQT-GTIRENILFGKDMRQ---SFYEEVLE---------------------GCALNQDIEMWADGD-LSVVGERGIN 720 (1458)
Q Consensus 667 ~~~i~~-~Ti~enI~fg~~~~~---~~y~~vl~---------------------~c~l~~dl~~l~~gd-~t~ig~~g~~ 720 (1458)
++.... .||.|.+.-|...-. .+|+++.. ....+.+++..-.|. .+.......+
T Consensus 74 ~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~~~~~~~ 153 (530)
T COG0488 74 EPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDEDRPVSS 153 (530)
T ss_pred CCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcccCchhh
Confidence 988875 599999998753211 11111111 111122222222221 1111456679
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeE-E
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKI-E 798 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i-~ 798 (1458)
||||||.||+|||||..+||++||||||++||..+..++ ++.+... +| |+|+||||.+||+. |++|+.++.|++ .
T Consensus 154 LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WL-e~~L~~~-~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~ 230 (530)
T COG0488 154 LSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWL-EDYLKRY-PG-TVIVVSHDRYFLDNVATHILELDRGKLTP 230 (530)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHH-HHHHHhC-CC-cEEEEeCCHHHHHHHhhheEEecCCceeE
Confidence 999999999999999999999999999999999987665 4444432 45 99999999999987 999999999987 5
Q ss_pred EcccchhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhcCcchHH
Q 000504 799 QSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWT 878 (1458)
Q Consensus 799 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~ 878 (1458)
+.|+|+.+.+.+.........+++.. + ++.+
T Consensus 231 y~Gny~~~~~~r~~~~~~~~~~~~~~------------------------~------------------~~~~------- 261 (530)
T COG0488 231 YKGNYSSYLEQKAERLRQEAAAYEKQ------------------------Q------------------KELA------- 261 (530)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHH------------------------H------------------HHHH-------
Confidence 88999998873322211111000000 0 0000
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 879 VYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKT 958 (1458)
Q Consensus 879 ~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~ 958 (1458)
.-..++..
T Consensus 262 ~~~~~i~r------------------------------------------------------------------------ 269 (530)
T COG0488 262 KEQEWIRR------------------------------------------------------------------------ 269 (530)
T ss_pred HHHHHHHH------------------------------------------------------------------------
Confidence 00000000
Q ss_pred HHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000504 959 AQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILG 1038 (1458)
Q Consensus 959 s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~ 1038 (1458)
+.
T Consensus 270 -------------------------------~~----------------------------------------------- 271 (530)
T COG0488 270 -------------------------------GK----------------------------------------------- 271 (530)
T ss_pred -------------------------------HH-----------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHH
Q 000504 1039 ISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRIN 1118 (1458)
Q Consensus 1039 l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~ 1118 (1458)
....++
T Consensus 272 -------~~~~~~------------------------------------------------------------------- 277 (530)
T COG0488 272 -------AAASKA------------------------------------------------------------------- 277 (530)
T ss_pred -------hccchH-------------------------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH--hcCCCCCccccC-C
Q 000504 1119 LLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQF--TNIPSEAPLVIK-N 1195 (1458)
Q Consensus 1119 ~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~--~~~~~E~~~~~~-~ 1195 (1458)
...+..+...+|+.+- ...|.+...... .
T Consensus 278 ------------------------------------------------k~a~sr~k~l~k~~~~~~~~~~~~~~~~~~~~ 309 (530)
T COG0488 278 ------------------------------------------------KKAKSRIKRLEKLEARLAEERPVEEGKPLAFR 309 (530)
T ss_pred ------------------------------------------------HHHHHHHHHHHHHHhhhhhcccccccccceee
Confidence 0001111112222211 011111000000 0
Q ss_pred CCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC
Q 000504 1196 SRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM 1275 (1458)
Q Consensus 1196 ~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~ 1275 (1458)
..+++.-+.+-.++++|+++.|.++ .++++++||.|.+|++||||||||+|||||+++|.|-..|.+|+|.+.-.
T Consensus 310 f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~~---- 384 (530)
T COG0488 310 FPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGET---- 384 (530)
T ss_pred ccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCCc----
Confidence 0111111123358999999999765 56999999999999999999999999999999999999999999988631
Q ss_pred CCHHHHhcceEEEccCC-CCcc-ccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1276 IGLQDLRSRLSIIPQDP-MLFQ-GTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1276 i~l~~LR~~i~iIpQdp-~LF~-gTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
-++||.+|+. .++. .|+-+++.... +..+.++...|.+.++..- ...++|+ .||||||-|
T Consensus 385 -------v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~------~~~~~v~----~LSGGEk~R 447 (530)
T COG0488 385 -------VKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGE------DQEKPVG----VLSGGEKAR 447 (530)
T ss_pred -------eEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChH------HHhCchh----hcCHhHHHH
Confidence 2689999997 4443 38888887543 4447889999999988543 2345554 599999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEe-cChhHHh
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEY-DSPRQLL 1430 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~-g~p~~Ll 1430 (1458)
+.||+.++.+|++|||||||++||.+|...+.++|.++ +.|||+|||+...+.. |++|+++++ ++.++ |.+++..
T Consensus 448 l~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~ 524 (530)
T COG0488 448 LLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYL 524 (530)
T ss_pred HHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHH
Confidence 99999999999999999999999999999999999875 4599999999999976 999999999 88888 7888877
Q ss_pred hc
Q 000504 1431 ED 1432 (1458)
Q Consensus 1431 ~~ 1432 (1458)
+.
T Consensus 525 ~~ 526 (530)
T COG0488 525 EQ 526 (530)
T ss_pred Hh
Confidence 54
No 85
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=8.6e-57 Score=608.24 Aligned_cols=211 Identities=22% Similarity=0.278 Sum_probs=177.2
Q ss_pred cEEEEeeeEEeCC-----------CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEEcCeeC
Q 000504 1207 KIELENLLVQYNP-----------TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP--SGGRILIDGVDI 1273 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~-----------~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p--~~G~I~IDG~dI 1273 (1458)
.+.|+||++..+. +...+|+|+|++++|||.+||+||||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 5899999988742 123599999999999999999999999999999999999763 689999999886
Q ss_pred CCCCHHHHhcceEEEccCCCCccc-cHHHhcCcC------CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCC
Q 000504 1274 SMIGLQDLRSRLSIIPQDPMLFQG-TVRTNLDPL------EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDG 1342 (1458)
Q Consensus 1274 ~~i~l~~LR~~i~iIpQdp~LF~g-TIR~NLdp~------~~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1342 (1458)
. ....|+.++|++|++.++.. |+||||... ...+++ .+.++++..+|.+. .|+.+|..+
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 4 24577889999999987765 999999531 122333 36678888887653 366776544
Q ss_pred -CCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhh-h-hhcCEEEEEeC-
Q 000504 1343 -ENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPT-V-IDNDLVLVLDE- 1417 (1458)
Q Consensus 1343 -~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~t-i-~~~DrVlvL~~- 1417 (1458)
..||||||||++|||+|+.+|+||+||||||+||+.+...+.+.|++.. +++|||+++|+++. + ..||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 5799999999999999999999999999999999999999999999864 47899999999984 3 56999999996
Q ss_pred CEEEEecChh
Q 000504 1418 GKVLEYDSPR 1427 (1458)
Q Consensus 1418 G~ivE~g~p~ 1427 (1458)
|+++++|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999864
No 86
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=8.1e-57 Score=518.02 Aligned_cols=486 Identities=18% Similarity=0.191 Sum_probs=358.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHH
Q 000504 937 SGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLL 1016 (1458)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i 1016 (1458)
.++..++..+|+..+...+.+.-.++....+...+++|..--...+..+.+ +|++.+..++...-...++..-..-
T Consensus 73 y~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P 148 (580)
T COG4618 73 YAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMP 148 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHH
Confidence 345567778899999999999999999999999988876544333334443 3666666554332111222111222
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHH
Q 000504 1017 SIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLI 1096 (1458)
Q Consensus 1017 ~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~ 1096 (1458)
..+++++...|++.++.+.-.++.+.+..+--...|+-.+...+....-.++..-+..+..+|+|.|+..+..+++.+..
T Consensus 149 ~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~ 228 (580)
T COG4618 149 LYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFN 228 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHH
Confidence 33445555667766655544433333333333334444444555566667888889999999999999877666665544
Q ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH-HHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Q 000504 1097 DDYSCVTFHNCGTMEWLCLRINLLFNFAFFL-VLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMIS 1175 (1458)
Q Consensus 1097 d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~-~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~s 1175 (1458)
..+....-...-.+.-++...-.+=...... ..+...+...+.+++|..-..-...-..-..+-..+..|-+.-....|
T Consensus 229 ~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s 308 (580)
T COG4618 229 AAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQS 308 (580)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHH
Confidence 4433322221111111111111111111111 112233345667777654322111112223344567788888888999
Q ss_pred HHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHH
Q 000504 1176 VERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQAL 1255 (1458)
Q Consensus 1176 veRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L 1255 (1458)
..|+.+..+..++..... +.| ..+|.+.++++++.=++...++|+|+||+++|||-+|||||||||||||.++|
T Consensus 309 ~~Rl~~lL~~~p~~~~~m---~LP---~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~l 382 (580)
T COG4618 309 YKRLNELLAELPAAAERM---PLP---APQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLL 382 (580)
T ss_pred HHHHHHHHHhCccccCCC---CCC---CCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHH
Confidence 999999987544332111 111 13789999999986555566899999999999999999999999999999999
Q ss_pred hccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhccccc
Q 000504 1256 FRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLL 1334 (1458)
Q Consensus 1256 ~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gL 1334 (1458)
.|...|.+|.|.+||-|+.+.+.+++-++|||.|||-.||+|||+|||.-|+ +.+++.|.+|.+.++.+|.|.++|+||
T Consensus 383 vG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GY 462 (580)
T COG4618 383 VGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGY 462 (580)
T ss_pred HcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCc
Confidence 9999999999999999999999999999999999999999999999999877 678888999999999999999999999
Q ss_pred CccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEE
Q 000504 1335 DAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVL 1413 (1458)
Q Consensus 1335 dt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~~DrVl 1413 (1458)
||.|||+|..||||||||++||||+..+|+++|||||-||||.+-|+.+.++|.+.. +++|+|+||||++.+..+|+|+
T Consensus 463 dT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkil 542 (580)
T COG4618 463 DTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKIL 542 (580)
T ss_pred cCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceee
Confidence 999999999999999999999999999999999999999999999999999987654 6899999999999999999999
Q ss_pred EEeCCEEEEecChhHHhhc
Q 000504 1414 VLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1414 vL~~G~ivE~g~p~~Ll~~ 1432 (1458)
||++|++..||+-+|.+++
T Consensus 543 vl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 543 VLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred eecCChHHhcCCHHHHHHH
Confidence 9999999999999998864
No 87
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2e-55 Score=605.28 Aligned_cols=529 Identities=16% Similarity=0.189 Sum_probs=390.4
Q ss_pred HHHHHHHHHHhhhhhHHHhhccc--ccccc-cch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000504 898 LCQVLFQALQMGSNYWIAWATDE--KRKVS-REQ--LIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFR 972 (1458)
Q Consensus 898 ~~~~~~~~~~~~~~~wl~~~~~~--~~~~~-~~~--~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ 972 (1458)
+..++..++....++.+....+. .+... ... +++.++++.++..++.....+.....+.+.-..+...+++++++
T Consensus 324 ~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~ 403 (1522)
T TIGR00957 324 CFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALV 403 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455666667777777654431 11111 111 11222222222233322233345567888888899999999999
Q ss_pred CccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 973 APISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTAR 1052 (1458)
Q Consensus 973 ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr 1052 (1458)
.|..+++...+|+++|++++|++.+.... ..+..++...+.++..++++.....+.+++.+.++++++.+..+..+..+
T Consensus 404 l~~~~~~~~~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~ 482 (1522)
T TIGR00957 404 ITNSARKSSTVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTK 482 (1522)
T ss_pred CChhhcCCCCHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998744 34555555555555554444332222222222233344444555555566
Q ss_pred HHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH
Q 000504 1053 ELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIIL 1132 (1458)
Q Consensus 1053 ~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~ 1132 (1458)
..++.....+....+.++|.++|+++||.|++|+.|.+++.+..++..+..........+.... .....+++.++.+..
T Consensus 483 ~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~f~~ 561 (1522)
T TIGR00957 483 TYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFT-WVCTPFLVALITFAV 561 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 6666677777888899999999999999999999999888776655444332222111111111 111111111111111
Q ss_pred H-hhc-CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCC-CccEE
Q 000504 1133 V-TLP-RSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPS-SGKIE 1209 (1458)
Q Consensus 1133 ~-~~~-~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~-~g~I~ 1209 (1458)
+ ... .+.++++.+-.++++...+...+..+...+..+.....|.+|+.+|.+.+++.+...+.. ...+. .+.|+
T Consensus 562 ~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~---~~~~~~~~~i~ 638 (1522)
T TIGR00957 562 YVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERR---TIKPGEGNSIT 638 (1522)
T ss_pred HHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccc---ccCCCCCCcEE
Confidence 1 111 345677766666666666677778888889999999999999999998665432111110 11111 24799
Q ss_pred EEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEc
Q 000504 1210 LENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIP 1289 (1458)
Q Consensus 1210 ~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIp 1289 (1458)
++|++++|+++.+++|+|+||+|++||+++|+|++|||||||+++|+|+++|++|+|.+|| +++|+|
T Consensus 639 ~~~~~~~~~~~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i~yv~ 705 (1522)
T TIGR00957 639 VHNATFTWARDLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG-------------SVAYVP 705 (1522)
T ss_pred EEEeEEEcCCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC-------------EEEEEc
Confidence 9999999976556799999999999999999999999999999999999999999999998 599999
Q ss_pred cCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000504 1290 QDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLD 1369 (1458)
Q Consensus 1290 Qdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLD 1369 (1458)
|+|.+|++|||+||....++++++..++++.|++.+.+..+|+|+||.+|++|.+||||||||++||||++++|+|++||
T Consensus 706 Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLD 785 (1522)
T TIGR00957 706 QQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFD 785 (1522)
T ss_pred CCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999876667888899999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHH---hcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHH
Q 000504 1370 EATASIDTATDNVIQQTIRE---ETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1370 EaTsslD~~Td~~Iq~~I~~---~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~ 1445 (1458)
||||+||+++++.|.+.+.+ ..+++|+|+||||++.+..||+|++|++|++++.|+|+++++ +++.|+++..++.
T Consensus 786 Ep~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~-~~~~~~~l~~~~~ 863 (1522)
T TIGR00957 786 DPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQ-RDGAFAEFLRTYA 863 (1522)
T ss_pred CCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHh-cchhHHHHHHhhc
Confidence 99999999999999998863 357899999999999999999999999999999999999996 4678999887543
No 88
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=8.6e-55 Score=556.86 Aligned_cols=509 Identities=14% Similarity=0.078 Sum_probs=400.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHhhccccccccc---chhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 892 LVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSR---EQLIGVFI----FLSGGSSFFILGRAVLLATIAIKTAQRLFL 964 (1458)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~---~~~l~vy~----~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~ 964 (1458)
.+.+.+++.++...+.+..+++.....+.-...+. ..++..++ +++++..+..++...+......+..+.+|+
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666777778888888766642111111 11122233 333334444455555666677777788888
Q ss_pred HHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHH
Q 000504 965 NMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQ-AAWQVFPLFLVILGISIWY 1043 (1458)
Q Consensus 965 ~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~-~~~~~~~v~~p~~~l~~~~ 1043 (1458)
+.+++....++.|||. ++|++.+|+++|++.+...+...+..++..++.+++.++.++. .+|.+.++++.+.++..++
T Consensus 177 ~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i 255 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVV 255 (659)
T ss_pred HHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 8888877889999997 8899999999999999999999999999999999988887775 8898888888888888888
Q ss_pred HHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHH
Q 000504 1044 QAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNF 1123 (1458)
Q Consensus 1044 ~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~ 1123 (1458)
.+++.+..+++.+......+.+.+.+.|.++|+.+||+|+.|+.+.+++.+..++..+..........++....+++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999888888888777777777777776666542
Q ss_pred HHH-H-HHH--HHHhhcC----CCcCHHH-HHHHHHH---HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCc-
Q 000504 1124 AFF-L-VLI--ILVTLPR----SAIDPSL-AGLAATY---GLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAP- 1190 (1458)
Q Consensus 1124 ~~~-~-~~~--~~~~~~~----~~~~~~~-~gl~l~y---~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~- 1190 (1458)
... + ..+ ..+.... +.++.|. ++...+| ...+...+..+.....++.....+.+|+.++.+.++|..
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~ 415 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVKS 415 (659)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111 1 111 1122211 4556553 3334444 445567777888889999999999999999986533210
Q ss_pred ------cccC--CC-----CC------CCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHH
Q 000504 1191 ------LVIK--NS-----RP------SPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTL 1251 (1458)
Q Consensus 1191 ------~~~~--~~-----~~------~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTL 1251 (1458)
...+ +. ++ .......+.|+++||+++|+++ +++|+|+||+|++||++||+|+||||||||
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKSTL 494 (659)
T TIGR00954 416 GNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKSSL 494 (659)
T ss_pred ccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHHHH
Confidence 0000 00 00 0000134679999999999643 469999999999999999999999999999
Q ss_pred HHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcC--------CCCCHHHHHHHHHHcCc
Q 000504 1252 IQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL--------EQHSDQEIWEVINKCHL 1323 (1458)
Q Consensus 1252 l~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~--------~~~sdeeI~~aL~~~~L 1323 (1458)
+++|.|+++|++|+|.+|+ |++++++||+|.+|++|+|+|+... .+.++++++++++.+++
T Consensus 495 l~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l 563 (659)
T TIGR00954 495 FRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQL 563 (659)
T ss_pred HHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCC
Confidence 9999999999999999874 6789999999999999999999642 24678899999999999
Q ss_pred HHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCh
Q 000504 1324 AEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRI 1403 (1458)
Q Consensus 1324 ~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl 1403 (1458)
.+++.+ |.|+|+..+ .+.+||||||||++||||++++|++|+||||||+||+++++.+++.+++. ++|+|+||||+
T Consensus 564 ~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~~ 639 (659)
T TIGR00954 564 THILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHRK 639 (659)
T ss_pred HHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCch
Confidence 999877 999999876 56799999999999999999999999999999999999999999999874 89999999999
Q ss_pred hhhhhcCEEEEEeC
Q 000504 1404 PTVIDNDLVLVLDE 1417 (1458)
Q Consensus 1404 ~ti~~~DrVlvL~~ 1417 (1458)
+++..||+|++|+.
T Consensus 640 ~~~~~~d~il~l~~ 653 (659)
T TIGR00954 640 SLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHhCCEEEEEeC
Confidence 99999999999973
No 89
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.3e-56 Score=563.33 Aligned_cols=191 Identities=25% Similarity=0.343 Sum_probs=163.0
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.++++|++++|+. ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ . +++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-~------------~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-L------------KIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-e------------eEE
Confidence 4899999999964 25999999999999999999999999999999999999999999986 1 599
Q ss_pred EEccCCCC-ccccHHHhcCcC-CCC-CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCC
Q 000504 1287 IIPQDPML-FQGTVRTNLDPL-EQH-SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1363 (1458)
Q Consensus 1287 iIpQdp~L-F~gTIR~NLdp~-~~~-sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1363 (1458)
|+||++.+ ++.|+++|+... ..+ .+..+.++++..++.+.. |.++ ..||||||||++|||||+++|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~-------~~~~----~~LSGGe~QRvaiAraL~~~p 472 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLL-------DKNV----KDLSGGELQRVAIAACLSRDA 472 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHH-------hCCc----ccCCHHHHHHHHHHHHHhcCC
Confidence 99999875 456999998642 122 233567788888886543 3444 359999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecC
Q 000504 1364 RILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDS 1425 (1458)
Q Consensus 1364 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~ 1425 (1458)
+||||||||++||.++...+.+.|++.. .++|||+|+|+++.+.. ||||++|++ ++...|+
T Consensus 473 ~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 473 DLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 9999999999999999999999999864 37899999999999865 999999964 8777666
No 90
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-53 Score=497.46 Aligned_cols=515 Identities=22% Similarity=0.298 Sum_probs=389.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000504 288 TIASYIGPFLITNFVSFLSGKHDHSS--YHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALTVLIYKRSMAIK 365 (1458)
Q Consensus 288 ~~~~~~~P~ll~~~i~~~~~~~~~~~--~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~iR~~L~~~Iy~K~L~ls 365 (1458)
-.+....|++++..++-++.-+. .+ .......+.+++++.+..+++.-.-.+....+..++--....-+|+..+.++
T Consensus 43 K~l~v~vp~~~~~~id~l~~~~~-~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld 121 (591)
T KOG0057|consen 43 KILNVQVPFIFKLIIDGLNDADG-NPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLD 121 (591)
T ss_pred hHhheehHHHHHHHHhhhhhccc-CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34555679999999998863222 12 1112233444555555555444333344444455555555666777776665
Q ss_pred cCC---CCHHHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 366 FAG---PSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTPLANRQER 441 (1458)
Q Consensus 366 ~~~---~~~G~ivnlms~D~~ri~~~~~~-~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~~~~~~~~~~~~~~ 441 (1458)
... +.+|++.+.|..-...|.+++.. +..+....+++.++...+|...|...++..++.+..-..++...+..-.+
T Consensus 122 ~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~ 201 (591)
T KOG0057|consen 122 LSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNR 201 (591)
T ss_pred HHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHH
Confidence 543 38999999999998888888653 45566667788888899999999444444555555556667777888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Q 000504 442 FHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRL-REIERDSLKKYLYTCSAIAFLF---WASPTLVSVITF 517 (1458)
Q Consensus 442 ~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~-R~~El~~l~k~~~~~a~~~~~~---~~~p~~v~~~tF 517 (1458)
+++++.++.|+-.+..-+.|.|-.+||.|+-|+.-.++..+. ++.|-..++-...+. +.++.- +++| ++.++..
T Consensus 202 fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~-~lnfgQ~~iFsv~-~~~im~l 279 (591)
T KOG0057|consen 202 FRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLA-FLNFGQKAIFSVA-LTFIMVL 279 (591)
T ss_pred HHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHH-HHHHHHHHHHHHH-HHHHHHH
Confidence 999999999999999999999999999999999877777654 555554444333222 222211 1111 1112222
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccEEEeeeE
Q 000504 518 GVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEPTSKASDVAIDIEAGE 597 (1458)
Q Consensus 518 ~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~I~i~~~~ 597 (1458)
+..-.....+|.+...-.-+++..|+.|+..|...+..+.|+..-+.-....+..+++.... ..|....+..|+++|++
T Consensus 280 ~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~-~~~i~~~~~~I~F~dV~ 358 (591)
T KOG0057|consen 280 GSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA-ALPIELFGGSIEFDDVH 358 (591)
T ss_pred HhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc-cCCcccCCCcEEEEeeE
Confidence 22224456799999999999999999999999999999988887766554444433321110 12222334569999999
Q ss_pred EEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE-------------EEE
Q 000504 598 YAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------------KAY 663 (1458)
Q Consensus 598 fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------------~ay 663 (1458)
|+|.++ .+.|++ ||+|++||+|||+|+|||||||++++|++..+ .+|++ .++|. |||
T Consensus 359 f~y~~k-------~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I-~IdG~dik~~~~~SlR~~Ig~ 429 (591)
T KOG0057|consen 359 FSYGPK-------RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSI-LIDGQDIKEVSLESLRQSIGV 429 (591)
T ss_pred EEeCCC-------CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcE-EECCeeHhhhChHHhhhheeE
Confidence 999864 579999 99999999999999999999999999999999 99997 88884 699
Q ss_pred EcCCCCCCCCcHHHHHhcCCCCCH-HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEE
Q 000504 664 VPQSSWIQTGTIRENILFGKDMRQ-SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVY 742 (1458)
Q Consensus 664 v~Q~~~i~~~Ti~enI~fg~~~~~-~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~ 742 (1458)
|||+..|||.||.+||.+|.+... ++..++++..++.+-+..+|+|.+|.+||+|..|||||||||+||||+.+||+|+
T Consensus 430 VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il 509 (591)
T KOG0057|consen 430 VPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPIL 509 (591)
T ss_pred eCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeE
Confidence 999999999999999999987532 3333344445778889999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhhhcchHHHHH
Q 000504 743 IFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSELVRQ 817 (1458)
Q Consensus 743 lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 817 (1458)
++|||||+||.++.+.+++. +++...+||+|+|-|+++.++.||+|+++++|++.+.|+++|++. +++.+.++
T Consensus 510 ~~DEaTS~LD~~TE~~i~~~-i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~ 582 (591)
T KOG0057|consen 510 LLDEATSALDSETEREILDM-IMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADL 582 (591)
T ss_pred EecCcccccchhhHHHHHHH-HHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHH
Confidence 99999999999999999875 555778999999999999999999999999999999999999998 66555544
No 91
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-53 Score=550.52 Aligned_cols=476 Identities=20% Similarity=0.242 Sum_probs=372.5
Q ss_pred HHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000504 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1458)
Q Consensus 952 ~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~ 1031 (1458)
...|.+.-..+-..++++.++..-+--..++.|+|+|-++.|.+.+++..+. +..+....++++..+.++...--+-++
T Consensus 267 ~~~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~-~h~~w~~Plqi~~~l~lLy~~LG~sa~ 345 (1381)
T KOG0054|consen 267 FRVGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACF-LHLLWSAPLQIILALYLLYGLLGPSAL 345 (1381)
T ss_pred HhhhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence 4556666666666677777777776667788999999999999999986654 445555666666555554433222233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 000504 1032 LFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTME 1111 (1458)
Q Consensus 1032 v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1111 (1458)
+.+.++++++.++.+..+..+..++.....+..-....+|.++|+++||.|+||+.|.++..+.-++-.+..........
T Consensus 346 ~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~ 425 (1381)
T KOG0054|consen 346 AGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSA 425 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556666777777777888888888888888999999999999999999999998876655543333222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCcc
Q 000504 1112 WLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPL 1191 (1458)
Q Consensus 1112 wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1191 (1458)
...+.......++.++.....+....+..++..+-.++++.-.+...+..+...+..+-+..+|++|+.+|...++..+.
T Consensus 426 ~~~~~~~~~p~lv~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~ 505 (1381)
T KOG0054|consen 426 LNSFLNFFSPVLVSVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPD 505 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcc
Confidence 22222222222222222222222334566776776677666666666666777777777889999999999976654432
Q ss_pred ccCCCCCCCCCCCCccEEEEeeeEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcC
Q 000504 1192 VIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDG 1270 (1458)
Q Consensus 1192 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG 1270 (1458)
..+. .+.-+.+-.|+++|.+++++++ .++.|+||||+|++|+.+||||++|||||||+++|+|-.+..+|++.++|
T Consensus 506 ~~~~---~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g 582 (1381)
T KOG0054|consen 506 SVER---SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG 582 (1381)
T ss_pred cccc---CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC
Confidence 2211 1112334569999999999864 34599999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1271 VDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1271 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
.++|+||.|.+|+|||||||-...+++.+.-.++++.|+|.+-++.+|.|=.|.|||+|.|||||||
T Consensus 583 -------------siaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQK 649 (1381)
T KOG0054|consen 583 -------------SVAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQK 649 (1381)
T ss_pred -------------eEEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHH
Confidence 4999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHH-HHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHH
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVI-QQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~I-q~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
||++||||+.++++|.+||.|-|+||.++.+.| .+.|+...+++|+|.|||.++.+.++|+|++|++|+|+|.|+++||
T Consensus 650 qRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el 729 (1381)
T KOG0054|consen 650 QRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEEL 729 (1381)
T ss_pred HHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHH
Confidence 999999999999999999999999999998766 6788888899999999999999999999999999999999999999
Q ss_pred hhcCCChHHHHHHHHH
Q 000504 1430 LEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1430 l~~~~s~F~~l~~~~~ 1445 (1458)
++ .++.|.++..+..
T Consensus 730 ~~-~~~~~~~l~~~~~ 744 (1381)
T KOG0054|consen 730 LK-SGGDFAELAHEEE 744 (1381)
T ss_pred Hh-cchhHHHHhhccc
Confidence 95 5788888855443
No 92
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-52 Score=489.38 Aligned_cols=461 Identities=22% Similarity=0.321 Sum_probs=348.3
Q ss_pred HHHHHHHHHHHHHHHHHhcccccCCC---CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhhHHH
Q 000504 344 RIGIRVRSALTVLIYKRSMAIKFAGP---SSGIIINMINVDVERIGDFFLYIHRIWLLPVQVFLALVIL--YKNLGAAPA 418 (1458)
Q Consensus 344 r~g~~iR~~L~~~Iy~K~L~ls~~~~---~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~~al~lL--~~~lG~~a~ 418 (1458)
....|+=+.+.-.+|+|...++.... ..|++.|.+..|++.+++.+..+...|...+-+++++.+. |..++ .+.
T Consensus 84 ~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~-~Al 162 (573)
T COG4987 84 DATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIP-LAL 162 (573)
T ss_pred HHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHH-HHH
Confidence 34557778888889999987766543 8999999999999999999988887776665554444433 44455 555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHH---HH
Q 000504 419 FAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKK---YL 495 (1458)
Q Consensus 419 l~gl~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k---~~ 495 (1458)
+.++...+..+.+...+.+..++..++..+.+..--....+.+.|+.-.+++|-++.|.+.+++. |..|.+. ..
T Consensus 163 ll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~---e~~~~~~q~k~~ 239 (573)
T COG4987 163 LLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEAT---EASWLKAQRKQA 239 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 66666666666666667777777777777777776778889999999999999999998877654 3333322 22
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHH-HhcCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000504 496 YTCSAIAFLFWA-SPTLVSVITFGVCI-LLKTPLT-SGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKE 572 (1458)
Q Consensus 496 ~~~a~~~~~~~~-~p~~v~~~tF~~~~-~~~~~L~-~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~ 572 (1458)
.......++..+ ...++....++... .-.+.++ +.-+...++.|..+-.-....|.++...-|+..|..|+.+.+.+
T Consensus 240 ~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q 319 (573)
T COG4987 240 RFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQ 319 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccC
Confidence 222222222211 11122211111111 1112233 22222222223222211122347778888999999999999987
Q ss_pred cCCCCCCCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCC
Q 000504 573 DNQKKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRIS 651 (1458)
Q Consensus 573 ~e~~~~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~ 651 (1458)
++........ ....+..++++|++|+|+.+ +.+.|+| ||++++||++||+|++|||||||++.|.|.++|++
T Consensus 320 ~~e~~~~~~~-~~~~~~~l~~~~vsF~y~~~------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~ 392 (573)
T COG4987 320 KPEVTFPDEQ-TATTGQALELRNVSFTYPGQ------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQ 392 (573)
T ss_pred CcccCCCccc-cCCccceeeeccceeecCCC------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCC
Confidence 7622211111 11122379999999999975 5689999 99999999999999999999999999999999999
Q ss_pred CcEEEECC-------------EEEEEcCCCCCCCCcHHHHHhcCCCC-CHHHHHHHHHHhhhhhhHHhhcCCCcccccCC
Q 000504 652 GAAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGER 717 (1458)
Q Consensus 652 G~~i~~~g-------------~~ayv~Q~~~i~~~Ti~enI~fg~~~-~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~ 717 (1458)
|++ ..+| .+++++|.+.+|++|+|||+.+++|. +.+...++++..+|++-++..|+|.+|.+||.
T Consensus 393 G~i-~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~ 471 (573)
T COG4987 393 GSI-TLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEG 471 (573)
T ss_pred Cee-eECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccC
Confidence 997 7877 36899999999999999999999875 45677889999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeE
Q 000504 718 GINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKI 797 (1458)
Q Consensus 718 g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i 797 (1458)
|..||||||||++|||++.+|++++||||||.+||+.|++++.+. +....++||+|+|||++..++.+|+|++|++|+|
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~l-l~~~~~~kTll~vTHrL~~le~~drIivl~~Gki 550 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLAL-LFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKI 550 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHH-HHHHhcCCeEEEEecccccHhhcCEEEEEECCee
Confidence 999999999999999999999999999999999999999999875 4556689999999999999999999999999999
Q ss_pred EEcccchhhhhhcchHHHHHH
Q 000504 798 EQSGKYEDLIADQNSELVRQM 818 (1458)
Q Consensus 798 ~~~g~~~~l~~~~~~~~~~~~ 818 (1458)
+++|+|+++++ .++.+.++.
T Consensus 551 ie~G~~~~Ll~-~~g~~~~l~ 570 (573)
T COG4987 551 IEEGTHAELLA-NNGRYKRLY 570 (573)
T ss_pred eecCCHHhhhc-cccHHHHHh
Confidence 99999999998 566665543
No 93
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.3e-52 Score=573.15 Aligned_cols=458 Identities=18% Similarity=0.203 Sum_probs=346.4
Q ss_pred HHHHHHHHhccccc---CCCCHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000504 353 LTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFV 428 (1458)
Q Consensus 353 L~~~Iy~K~L~ls~---~~~~~G~ivnlms~D~~ri~~~~~-~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~ 428 (1458)
+-..+|++.++.+. .....|+|+|.++.|++.+.+++. .+..+....+.++.++++++..-. +..++.+.++++.
T Consensus 1033 l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p-~~~~~~i~~~~~~ 1111 (1560)
T PTZ00243 1033 MHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQP-FVLVALVPCGYLY 1111 (1560)
T ss_pred HHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 44555666665443 233899999999999999998765 345555566666666555543322 3333222222233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q 000504 429 MVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKK----YLYTCSAIAFL 504 (1458)
Q Consensus 429 ~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k----~~~~~a~~~~~ 504 (1458)
..+...+.+..+..++.....+..-....+|.++|+++||.|++|+.|.++..+.-+...+...+ ..+......++
T Consensus 1112 ~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l 1191 (1560)
T PTZ00243 1112 YRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFL 1191 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455556666666666777778999999999999999999999888876553333322111 11111111111
Q ss_pred HHHHHHHHHHHHHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC--C--
Q 000504 505 FWASPTLVSVITFGVCI--LLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKK--P-- 578 (1458)
Q Consensus 505 ~~~~p~~v~~~tF~~~~--~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~--~-- 578 (1458)
. ...++.++.++++. .....++++.+..++.+...+..|+..+...+..+.++++|++||.+|++..++++ .
T Consensus 1192 ~--~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~ 1269 (1560)
T PTZ00243 1192 S--NIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELD 1269 (1560)
T ss_pred H--HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence 1 11111122222222 22335788888888888888999999999999999999999999999996322110 0
Q ss_pred ---------------------CCC--C----CCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEc
Q 000504 579 ---------------------ITE--P----TSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCG 630 (1458)
Q Consensus 579 ---------------------~~~--~----~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG 630 (1458)
.+. . +.......|+++|++|+|+++ ..+.|+| ||+|++||++||||
T Consensus 1270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~------~~~vL~~vsf~I~~GekVaIVG 1343 (1560)
T PTZ00243 1270 EEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG------LPLVLRGVSFRIAPREKVGIVG 1343 (1560)
T ss_pred ccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC------CCceeecceEEECCCCEEEEEC
Confidence 000 0 001123469999999999754 3468999 99999999999999
Q ss_pred cCCCChhHHHHHHhCCccCCCCcEEEECCE-------------EEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHh
Q 000504 631 SVGSGKSSLLSSILGEIPRISGAAIKVHGK-------------KAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGC 697 (1458)
Q Consensus 631 ~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------------~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c 697 (1458)
++|||||||+++|+|.++|++|++ .++|. ++||||+|.+|+|||||||..+.+++++...++++.|
T Consensus 1344 rTGSGKSTLl~lLlrl~~p~~G~I-~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a 1422 (1560)
T PTZ00243 1344 RTGSGKSTLLLTFMRMVEVCGGEI-RVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELV 1422 (1560)
T ss_pred CCCCCHHHHHHHHhCCCCCCCcEE-EECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHC
Confidence 999999999999999999999996 88873 6999999999999999999987788889999999999
Q ss_pred hhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHccC-CCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEE
Q 000504 698 ALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSN-SDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYT 776 (1458)
Q Consensus 698 ~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~-~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilv 776 (1458)
++.+.++.+|+|.+|.+||+|.|||||||||++||||++++ |+|+|||||||+||+++.+.+. +.++...+++|+|+|
T Consensus 1423 ~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq-~~L~~~~~~~TvI~I 1501 (1560)
T PTZ00243 1423 GLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQ-ATVMSAFSAYTVITI 1501 (1560)
T ss_pred CChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHH-HHHHHHCCCCEEEEE
Confidence 99999999999999999999999999999999999999996 8999999999999999977774 566777789999999
Q ss_pred ecccchhccCCEEEEEeCCeEEEcccchhhhhhcchHHHHHHHHh
Q 000504 777 THQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSELVRQMKAH 821 (1458)
Q Consensus 777 tH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 821 (1458)
+|+++.+..||+|++|++|+|++.|+++|++++++..|.+++...
T Consensus 1502 AHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1502 AHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred eccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 999999999999999999999999999999974567787776543
No 94
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=7.3e-52 Score=523.21 Aligned_cols=508 Identities=15% Similarity=0.147 Sum_probs=365.6
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 269 IIH-AVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGI 347 (1458)
Q Consensus 269 l~~-~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~ 347 (1458)
+++ .+|+.+++..++.++..++..+.|.+++.+++... .. .....+.+++ +++.. .++..-..+...+.+.
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~--~~--~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~ 82 (555)
T TIGR01194 11 LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEEN--FL--GQGSLFSFGG-LCLLA---LLFRIGADIFPAYAGM 82 (555)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--cc--cchHHHHHHH-HHHHH---HHHHHHHHHHHHHHHH
Confidence 456 67788888888999999999999999988875321 11 1110111222 22221 2222233344566778
Q ss_pred HHHHHHHHHHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000504 348 RVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLYIHRIWLLPVQVFLALVILYKNLGAAPAFAALFS 424 (1458)
Q Consensus 348 ~iR~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~ 424 (1458)
++...+...+|+|.++++.. ..++|++++.++.|++.+.+++..+..+....+.+++++++++. +.|..+++.+++
T Consensus 83 ~~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~L~li~l~~ 161 (555)
T TIGR01194 83 HIIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAY-LSVPMFAITISA 161 (555)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHH
Confidence 88888888899999887653 24899999999999999999876555555555555555544443 233444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 425 TIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQ--EFLKKLLRLREIERDSLKKYLYTCSAIA 502 (1458)
Q Consensus 425 ~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~--~f~~~I~~~R~~El~~l~k~~~~~a~~~ 502 (1458)
+++.+.+..+..++.++...+..+..++..+.+.|.++|++++|.++.|+ ...+++.+.-++-.+...+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (555)
T TIGR01194 162 IIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAE 241 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455556666677777778888888999999999999999999854 3333333322211111111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-C-CC
Q 000504 503 FLFWASPTLVSVITFGVCILL---KTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDN-Q-KK 577 (1458)
Q Consensus 503 ~~~~~~p~~v~~~tF~~~~~~---~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e-~-~~ 577 (1458)
.+....+ .+.++.+++. .+.++.+.+++++.+...+..|+..+...+..+.++++|++||.++++.++ + ..
T Consensus 242 ~~~~~~~----~~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~ 317 (555)
T TIGR01194 242 NFGQLLF----FLLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPE 317 (555)
T ss_pred HHHHHHH----HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 1111111 1111111111 257999999999999999999999999999999999999999999986422 1 10
Q ss_pred --CCCCC-----CCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC
Q 000504 578 --PITEP-----TSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR 649 (1458)
Q Consensus 578 --~~~~~-----~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~ 649 (1458)
..+.. +.......|+++|++|+|++.+. ...+.|+| |+++++|++++|+||||||||||+++|+|+++|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~---~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p 394 (555)
T TIGR01194 318 LELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEG---SEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIP 394 (555)
T ss_pred ccccccccccccccCCCCceEEEEEEEEEeCCCCC---CcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 00000 11112346999999999975300 12368999 999999999999999999999999999999999
Q ss_pred CCCcEEEECCE-------------EEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccC
Q 000504 650 ISGAAIKVHGK-------------KAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGE 716 (1458)
Q Consensus 650 ~~G~~i~~~g~-------------~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~ 716 (1458)
++|++ .++|. ++||+|+|+++++|+++|+ ..+.++++.+++++.+++.++++.+|+|++|.
T Consensus 395 ~~G~i-~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~--- 468 (555)
T TIGR01194 395 QEGEI-LLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT--- 468 (555)
T ss_pred CCcEE-EECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc---
Confidence 99987 77763 5999999999999999995 23445677788899999999999999999873
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhccCCEEEEEeCC
Q 000504 717 RGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDAADLVLVMKDG 795 (1458)
Q Consensus 717 ~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~D~i~~l~~G 795 (1458)
.+||||||||++||||++++|+|+|||||||+||+++.+.+.+.+++.. .+++|+|+|||+++.+..||+|++|++|
T Consensus 469 --~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G 546 (555)
T TIGR01194 469 --TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAG 546 (555)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECC
Confidence 7899999999999999999999999999999999999998887665443 4689999999999998899999999999
Q ss_pred eEEEc
Q 000504 796 KIEQS 800 (1458)
Q Consensus 796 ~i~~~ 800 (1458)
++++.
T Consensus 547 ~i~~~ 551 (555)
T TIGR01194 547 CIVKD 551 (555)
T ss_pred EEEEe
Confidence 99864
No 95
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.4e-51 Score=565.34 Aligned_cols=477 Identities=19% Similarity=0.209 Sum_probs=362.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHH
Q 000504 941 SFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIII 1020 (1458)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~ 1020 (1458)
.++.....+.....+.+.-..+...+++++++.+...+++.++|+++|++++|++.++..+... ..++...+.++..++
T Consensus 136 ~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~ 214 (1490)
T TIGR01271 136 TLLLHPAIFGLHHLGMQMRIALFSLIYKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMG 214 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 3444444555556677777777778899999999999999999999999999999999876543 344455555555555
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Q 000504 1021 LMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYS 1100 (1458)
Q Consensus 1021 v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~ 1100 (1458)
++.....+..++.+.++++++.++.+..+.....++..........+..+|.++|+++||.|++|+.|.++..+.-+...
T Consensus 215 lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El 294 (1490)
T TIGR01271 215 LIWELLEVNGFCGLGFLILLALFQACLGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDEL 294 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 55444434444444445556666667777777777777788888899999999999999999999999988877766554
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHHHHH
Q 000504 1101 CVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQ-AWVIWNLCNVENKMISVERI 1179 (1458)
Q Consensus 1101 ~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~-~~~i~~~~~le~~~~sveRi 1179 (1458)
+..........|....... ...+..++.+..+.+..+ .+++.+-.++++...+...+ ..+...+..+....+|++||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI 372 (1490)
T TIGR01271 295 KLTRKIAYLRYFYSSAFFF-SGFFVVFLSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKI 372 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433332222222211111 111111111111111122 34544444444444444433 34566677778889999999
Q ss_pred HHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCC--------------------------------CCcceee
Q 000504 1180 LQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT--------------------------------LPMVLKG 1227 (1458)
Q Consensus 1180 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~--------------------------------~~~vL~~ 1227 (1458)
.+|++.++..+. +. + +....|+++|++|.|+.. ..++|+|
T Consensus 373 ~~fL~~~e~~~~--~~-----~-~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~ 444 (1490)
T TIGR01271 373 QDFLCKEEYKTL--EY-----N-LTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKN 444 (1490)
T ss_pred HHHhcCcccccc--cc-----c-CCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceee
Confidence 999976543211 00 0 112358888888888421 1358999
Q ss_pred eeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCC
Q 000504 1228 ITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE 1307 (1458)
Q Consensus 1228 is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~ 1307 (1458)
+||+|++||+++|+||+|||||||+++|+|+++|++|+|.+|| +++|+||+|.+|++|||+||....
T Consensus 445 i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~ 511 (1490)
T TIGR01271 445 ISFKLEKGQLLAVAGSTGSGKSSLLMMIMGELEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGL 511 (1490)
T ss_pred eEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhcc
Confidence 9999999999999999999999999999999999999999998 599999999999999999998655
Q ss_pred CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHH-H
Q 000504 1308 QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQ-T 1386 (1458)
Q Consensus 1308 ~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~-~ 1386 (1458)
.+++++..++++.|+|.+.+..+|+|.+|.+|++|.+||||||||++||||++++|+|++||||||+||+++.+.|.+ .
T Consensus 512 ~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~ 591 (1490)
T TIGR01271 512 SYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESC 591 (1490)
T ss_pred ccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 667777888999999999999999999999999999999999999999999999999999999999999999999987 4
Q ss_pred HHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 000504 1387 IREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVA 1442 (1458)
Q Consensus 1387 I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~ 1442 (1458)
+++..+++|||+|||+++.+..||+|++|++|++++.|+++++.+. ++.|.+.+.
T Consensus 592 l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~~~-~~~~~~~~~ 646 (1490)
T TIGR01271 592 LCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSELQAK-RPDFSSLLL 646 (1490)
T ss_pred HHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHHHhc-ChHHHHHHh
Confidence 6777789999999999999999999999999999999999999864 456766653
No 96
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-53 Score=502.40 Aligned_cols=441 Identities=23% Similarity=0.353 Sum_probs=332.1
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE-------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK------- 660 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~------- 660 (1458)
..++++|.+-+|+. ...|++ ||++.+||+++++|.||+|||||+|.|.|.++|++|++ .++|+
T Consensus 7 ~ll~~~~i~K~Fgg--------V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I-~~~G~~~~~~sp 77 (500)
T COG1129 7 PLLELRGISKSFGG--------VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEI-LIDGKPVAFSSP 77 (500)
T ss_pred ceeeeecceEEcCC--------ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceE-EECCEEccCCCH
Confidence 46889999988864 478999 99999999999999999999999999999999999986 88885
Q ss_pred -------EEEEcCCCCC-CCCcHHHHHhcCCCCCH-------HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 661 -------KAYVPQSSWI-QTGTIRENILFGKDMRQ-------SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 661 -------~ayv~Q~~~i-~~~Ti~enI~fg~~~~~-------~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
|+.|.|+.-+ ++.||.|||.+|++... .+.++.. ..+ ++.+... ........+||+||
T Consensus 78 ~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A--~~~---l~~lg~~--~~~~~~v~~Lsiaq 150 (500)
T COG1129 78 RDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRA--REL---LARLGLD--IDPDTLVGDLSIAQ 150 (500)
T ss_pred HHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHH--HHH---HHHcCCC--CChhhhhhhCCHHH
Confidence 5899999776 67899999999976432 2221111 111 1111111 11445677999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccc-
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKY- 803 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~- 803 (1458)
||-|+||||++.+++|++||||||+|+.+..+++|+.+.+-..+|.++|+|||+++++.. ||+|.||+||+.+..++.
T Consensus 151 rQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~ 230 (500)
T COG1129 151 RQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTA 230 (500)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccc
Confidence 999999999999999999999999999999999998543434479999999999999865 999999999999865431
Q ss_pred hhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhcCcchHHHHHHH
Q 000504 804 EDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYSAF 883 (1458)
Q Consensus 804 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y 883 (1458)
+++.. ++ .
T Consensus 231 ~~~~~----------------------------------------~~--------------------------------l 238 (500)
T COG1129 231 AETSE----------------------------------------DE--------------------------------L 238 (500)
T ss_pred cCCCH----------------------------------------HH--------------------------------H
Confidence 11100 00 0
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 884 ITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLF 963 (1458)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~ 963 (1458)
++.+
T Consensus 239 v~~M---------------------------------------------------------------------------- 242 (500)
T COG1129 239 VRLM---------------------------------------------------------------------------- 242 (500)
T ss_pred HHHh----------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000504 964 LNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWY 1043 (1458)
Q Consensus 964 ~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~ 1043 (1458)
.|
T Consensus 243 -------------------vG----------------------------------------------------------- 244 (500)
T COG1129 243 -------------------VG----------------------------------------------------------- 244 (500)
T ss_pred -------------------hC-----------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHH
Q 000504 1044 QAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNF 1123 (1458)
Q Consensus 1044 ~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~ 1123 (1458)
T Consensus 245 -------------------------------------------------------------------------------- 244 (500)
T COG1129 245 -------------------------------------------------------------------------------- 244 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhc-CCCCCccccCCCCCCCCC
Q 000504 1124 AFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTN-IPSEAPLVIKNSRPSPEW 1202 (1458)
Q Consensus 1124 ~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~-~~~E~~~~~~~~~~~~~w 1202 (1458)
| +..+ .|. + +..-
T Consensus 245 ------------------------------------------------------r--~~~~~~~~-~---------~~~~ 258 (500)
T COG1129 245 ------------------------------------------------------R--ELEDLFPE-P---------PEEG 258 (500)
T ss_pred ------------------------------------------------------c--chhhhccc-c---------cccC
Confidence 0 0000 000 0 0000
Q ss_pred CCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH-HH
Q 000504 1203 PSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ-DL 1281 (1458)
Q Consensus 1203 p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~-~L 1281 (1458)
+..-.++++|++.. ..++|+||++++||.+||.|=-|||+|-++.+|||.-++.+|+|.+||.++.--++. ..
T Consensus 259 ~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai 332 (500)
T COG1129 259 IGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDAI 332 (500)
T ss_pred CCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHHH
Confidence 11224678887642 258999999999999999999999999999999999999999999999988877765 58
Q ss_pred hcceEEEccCCC---Cc-cccHHHhcCcC--CCCCHH-HHHHHHHHcCcHHHHHhcc---cccCccccCCCCCCChhHHH
Q 000504 1282 RSRLSIIPQDPM---LF-QGTVRTNLDPL--EQHSDQ-EIWEVINKCHLAEIVRQDQ---RLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1282 R~~i~iIpQdp~---LF-~gTIR~NLdp~--~~~sde-eI~~aL~~~~L~~~i~~lp---~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
+..|+|||-|-- +| .-+|++|+... ..++.. -+...-++.-..++++.+. ...+.++ .+||||.+|
T Consensus 333 ~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v----~~LSGGNQQ 408 (500)
T COG1129 333 KAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI----GTLSGGNQQ 408 (500)
T ss_pred HcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh----hcCCchhhh
Confidence 899999998862 44 55999998632 111100 1222333333444554442 2334444 479999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPR 1427 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~ 1427 (1458)
+++|||+|..+|+||||||||.++|..+.+.|.+.|++.. ++.+||+|+-.++.+. -||||+||.+|+++..=+..
T Consensus 409 KVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~ 486 (500)
T COG1129 409 KVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGELDRE 486 (500)
T ss_pred hHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEeccc
Confidence 9999999999999999999999999999999999999865 5799999999999987 59999999999998743333
No 97
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=8.1e-51 Score=468.51 Aligned_cols=525 Identities=21% Similarity=0.263 Sum_probs=412.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 263 TSLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGA 342 (1458)
Q Consensus 263 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~ 342 (1458)
.....+..-.+++.++..++|..+-.++..++|+.+-++-|-+=...+ .+. -..+.++....++++.+++.--.+..
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s-~~T--Lv~Ltvlal~ly~~~glLd~iR~~~l 87 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRS-VPT--LVMLTVLALGLYAFQGLLDAIRSRVL 87 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCC-cch--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567777778888888888888888888999887766665433322 122 23344444555666677776677888
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccCCCC---HHHHHHHHHhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhh
Q 000504 343 NRIGIRVRSALTVLIYKRSMAIKFAGPS---SGIIINMINVDVERIGDFFL-----YIHRIWLLPVQVFLALVILYKNLG 414 (1458)
Q Consensus 343 ~r~g~~iR~~L~~~Iy~K~L~ls~~~~~---~G~ivnlms~D~~ri~~~~~-----~~~~~w~~plqi~~al~lL~~~lG 414 (1458)
.|+|.++-..|..-||.-+++.....+. ..+.. .|.+.+..|.. -+.++--+|+-+++ +|++.-.+|
T Consensus 88 ~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v-~fl~Hp~lG 162 (580)
T COG4618 88 VRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAV-IFLFHPWLG 162 (580)
T ss_pred HHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHH-HHHHHHHHH
Confidence 9999999999999999988654444332 23333 47888888764 34444445775544 356666889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000504 415 AAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKY 494 (1458)
Q Consensus 415 ~~a~l~gl~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~ 494 (1458)
+.+++|.++++.+..+|-.++++- -++-.+..-+|....+-.++|..+|+.+|......++..+....-+++-.+.
T Consensus 163 -~~a~~ga~iLv~la~ln~~~t~~p---~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~a 238 (580)
T COG4618 163 -LIALAGAIILVVLALLNERATRKP---LKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERA 238 (580)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 888888888888888887776542 3445566777888999999999999999999999999888877777666555
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000504 495 LYTCSAIAFLFWASPTLVS--VITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKE 572 (1458)
Q Consensus 495 ~~~~a~~~~~~~~~p~~v~--~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~ 572 (1458)
.........+.-..-.+.. +...|.|..+++++|++.++..--+..-.-.|+-..-....++..++.|.+|++++|..
T Consensus 239 sd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~ 318 (580)
T COG4618 239 SDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAE 318 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5444433333222222222 34456777888999999999887777777789999999999999999999999999987
Q ss_pred cCCCCCCCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCC
Q 000504 573 DNQKKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRIS 651 (1458)
Q Consensus 573 ~e~~~~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~ 651 (1458)
....+..-.. +..+..+.+++.++.-+.. .+|++++ ||++.+|+-++|+||+|||||||.++|.|..+|.+
T Consensus 319 ~p~~~~~m~L--P~P~g~L~Ve~l~~~PPg~------~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~ 390 (580)
T COG4618 319 LPAAAERMPL--PAPQGALSVERLTAAPPGQ------KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTS 390 (580)
T ss_pred CccccCCCCC--CCCCceeeEeeeeecCCCC------CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCC
Confidence 6533322223 3345678999999976554 5799999 99999999999999999999999999999999999
Q ss_pred CcEEEECC-------------EEEEEcCCCCCCCCcHHHHHh-cCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCC
Q 000504 652 GAAIKVHG-------------KKAYVPQSSWIQTGTIRENIL-FGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGER 717 (1458)
Q Consensus 652 G~~i~~~g-------------~~ayv~Q~~~i~~~Ti~enI~-fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~ 717 (1458)
|+| +++| .|||.||+-.+|.|||+|||. |+.+.|.++.-++.+..+.++-+-.+|+|++|.||+.
T Consensus 391 G~V-RLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~ 469 (580)
T COG4618 391 GSV-RLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEG 469 (580)
T ss_pred CcE-EecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCC
Confidence 997 8887 479999999999999999997 6667777765555666667777889999999999999
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeE
Q 000504 718 GINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKI 797 (1458)
Q Consensus 718 g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i 797 (1458)
|.+|||||||||+||||+|.||.+++||||-|+||.+-...+.+.+..-..+|.|+|+|||+++.+..+|+|++|+||++
T Consensus 470 G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~ 549 (580)
T COG4618 470 GATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRI 549 (580)
T ss_pred CCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChH
Confidence 99999999999999999999999999999999999998777766444444579999999999999999999999999999
Q ss_pred EEcccchhhhh
Q 000504 798 EQSGKYEDLIA 808 (1458)
Q Consensus 798 ~~~g~~~~l~~ 808 (1458)
...|+-+|+++
T Consensus 550 ~~FG~r~eVLa 560 (580)
T COG4618 550 AAFGPREEVLA 560 (580)
T ss_pred HhcCCHHHHHH
Confidence 99999988876
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.6e-50 Score=509.02 Aligned_cols=500 Identities=15% Similarity=0.160 Sum_probs=349.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 265 LPQVIIHAVWKSLALNAAFAGVNTIASYIG-PFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGAN 343 (1458)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~ 343 (1458)
+++.+++.+++.++...++.++..++..+. |++.+.+++.+.... .. -+.+++.+++..++..+ ..+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~~~---~~--~~~~~~~~~~~~~~~~~----~~~~~~ 73 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTSL---LV--LPEFLGLLLLLMAVTLG----SQLALT 73 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc---hH--HHHHHHHHHHHHHHHHH----HHHHHH
Confidence 566778888888888888888888888774 677788887553211 11 11111111112222222 223334
Q ss_pred HHHHHHHHHHHHHHHHHhccccc---CCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000504 344 RIGIRVRSALTVLIYKRSMAIKF---AGPSSGIIINMINVDVERIGDFFLYIHRIWLLPVQVFLALVILYKNLGAAPAFA 420 (1458)
Q Consensus 344 r~g~~iR~~L~~~Iy~K~L~ls~---~~~~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~~al~lL~~~lG~~a~l~ 420 (1458)
+++.++...+...+|+|.++++. ...++|+++|.++.|++.+..++..+..++...+.+++++++++. +.|..+++
T Consensus 74 ~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~-~~~~l~li 152 (547)
T PRK10522 74 TLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAW-LSPKMLLV 152 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHH
Confidence 44555555566666777776643 234899999999999999998766667778888888777776664 34466666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhc--cHHHHHHHHHH----HHHHHHHHHHHH
Q 000504 421 ALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLS--WEQEFLKKLLR----LREIERDSLKKY 494 (1458)
Q Consensus 421 gl~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~--wE~~f~~~I~~----~R~~El~~l~k~ 494 (1458)
.++++++.+.+...+.++..+..++.++..+++.+.++|.++|++++++.. .++.+.++..+ .++...+..
T Consensus 153 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 229 (547)
T PRK10522 153 TAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRAD--- 229 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHH---
Confidence 666666666677788888888889999999999999999999999997433 22334444433 333222211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000504 495 LYTCSAIAFLFWASPTLVSVITFGVCILLKTP---LTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIK 571 (1458)
Q Consensus 495 ~~~~a~~~~~~~~~p~~v~~~tF~~~~~~~~~---L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~ 571 (1458)
.......... .++..+.++.+.+.++. .+.+.+.....+...+..|+..+...+..+.+++++++|+.+++.
T Consensus 230 -~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~ 304 (547)
T PRK10522 230 -TFHLSAVNWS----NIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLAL 304 (547)
T ss_pred -HHHHHHHHHH----HHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1111111111 11111122222222211 222222222222333678999999999999999999999999986
Q ss_pred ccCCCCCCCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCC
Q 000504 572 EDNQKKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRI 650 (1458)
Q Consensus 572 ~~e~~~~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~ 650 (1458)
.++.++.....+. +....++++|++|+|+.+ .+.|++ |+++++|++++|+||||||||||+++|+|+++|+
T Consensus 305 ~~~~~~~~~~~~~-~~~~~i~~~~v~f~y~~~-------~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~ 376 (547)
T PRK10522 305 APYKAEFPRPQAF-PDWQTLELRNVTFAYQDN-------GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQ 376 (547)
T ss_pred ccccccccccccc-CcCceEEEEEEEEEeCCC-------CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC
Confidence 5432111111111 112469999999999743 468999 9999999999999999999999999999999999
Q ss_pred CCcEEEECC-------------EEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCC
Q 000504 651 SGAAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGER 717 (1458)
Q Consensus 651 ~G~~i~~~g-------------~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~ 717 (1458)
+|++ .++| .++||+|+|.++++|++|| +.+.+++..++.++.+++..+++. ++|. .+
T Consensus 377 ~G~i-~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~ 446 (547)
T PRK10522 377 SGEI-LLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----IS 446 (547)
T ss_pred CeEE-EECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----CC
Confidence 9987 7776 3699999999999999999 445566667777777777665542 2221 24
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhccCCEEEEEeCCe
Q 000504 718 GINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGK 796 (1458)
Q Consensus 718 g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~ 796 (1458)
|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+..... +++|+|+|||+++.+..||+|++|++|+
T Consensus 447 G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~ 526 (547)
T PRK10522 447 NLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQ 526 (547)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCE
Confidence 789999999999999999999999999999999999998888765443332 4899999999999999999999999999
Q ss_pred EEEc
Q 000504 797 IEQS 800 (1458)
Q Consensus 797 i~~~ 800 (1458)
+.+.
T Consensus 527 i~e~ 530 (547)
T PRK10522 527 LSEL 530 (547)
T ss_pred EEEe
Confidence 9865
No 99
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-52 Score=471.51 Aligned_cols=524 Identities=18% Similarity=0.283 Sum_probs=384.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 283 FAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVE--SLTQRQWYFGANRIGIRVRSALTVLIYKR 360 (1458)
Q Consensus 283 ~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~~~g~~l~~~l~~~~~~~--~l~~~~~~~~~~r~g~~iR~~L~~~Iy~K 360 (1458)
+..+.-+....-|.+.+.+++-+..+.. +.+..-+.++...|+-.... .+..+--.|..-++..----.+-..+|++
T Consensus 223 ll~i~rli~~~~pi~~k~iv~~ltap~~-~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrH 301 (790)
T KOG0056|consen 223 LLIIGRLINVSLPILSKWIVDELTAPDT-FQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRH 301 (790)
T ss_pred HHHHHHHHhhhhHHhHHHHHHhhcCcch-hhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHH
Confidence 3334444455569999999988875543 33332333333322221110 11111111111111111112334455666
Q ss_pred hcccccC---CCCHHHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000504 361 SMAIKFA---GPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVSNTPLA 436 (1458)
Q Consensus 361 ~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~~-~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~~~~~~~~~ 436 (1458)
.+.||-. .|.+||+...|......+. +..+ +..+--..+.++++++..+....||-.+..+..|.+..-+...+.
T Consensus 302 lh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iT 380 (790)
T KOG0056|consen 302 LHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKIT 380 (790)
T ss_pred HHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeeeee
Confidence 6555532 4588999988887776665 3332 334444456677777766666665665555555555555556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 437 NRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQ----EFLKKLLRLREIERDSLKKYLYTCSAIAFLFWASPTLV 512 (1458)
Q Consensus 437 ~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~----~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~~p~~v 512 (1458)
..-.++|+++..+-.+--..-.+.|-|..++|.|+-|+ .+.+.|.+..++|-+.+....++......++-.. +.
T Consensus 381 eWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lg--ll 458 (790)
T KOG0056|consen 381 EWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLG--LL 458 (790)
T ss_pred hhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH--Hh
Confidence 66677777776654444445567788999999999886 4667777777888776655444443333222111 12
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCCCCCCCCCCCCccE
Q 000504 513 SVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDN-QKKPITEPTSKASDVAI 591 (1458)
Q Consensus 513 ~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e-~~~~~~~~~~~~~~~~I 591 (1458)
....+.+|.+..+.++.|...-.+.++-.|.+|++.+.....++....+-++|+-+.+++++ -.|.....|-......|
T Consensus 459 ~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G~i 538 (790)
T KOG0056|consen 459 AGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQGKI 538 (790)
T ss_pred hhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCCeE
Confidence 22334556566778999998888888899999999999999999999999999999998766 22322223333345689
Q ss_pred EEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE----------
Q 000504 592 DIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK---------- 660 (1458)
Q Consensus 592 ~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~---------- 660 (1458)
+++|++|+|++. +|+|+| ||++++|+.+|+|||+|+||||+++.|.+.++..+|.+ .++|+
T Consensus 539 ~fsnvtF~Y~p~-------k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI-~iDgqdIrnvt~~SL 610 (790)
T KOG0056|consen 539 EFSNVTFAYDPG-------KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSI-TIDGQDIRNVTQSSL 610 (790)
T ss_pred EEEEeEEecCCC-------CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceE-EEcCchHHHHHHHHH
Confidence 999999999865 799999 99999999999999999999999999999999999986 88884
Q ss_pred ---EEEEcCCCCCCCCcHHHHHhcCCCC--CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHH
Q 000504 661 ---KAYVPQSSWIQTGTIRENILFGKDM--RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1458)
Q Consensus 661 ---~ayv~Q~~~i~~~Ti~enI~fg~~~--~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 735 (1458)
||.|||+..+||.||..||.+|++- |++-| ++.++.+..+.+-.+|+|..|.+||+|-.||||+|||||+||++
T Consensus 611 Rs~IGVVPQDtvLFNdTI~yNIryak~~Asneevy-aAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARti 689 (790)
T KOG0056|consen 611 RSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVY-AAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTI 689 (790)
T ss_pred HHhcCcccCcceeecceeeeheeecCCCCChHHHH-HHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHH
Confidence 6999999999999999999999874 34444 45678888889999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhhhcchHHH
Q 000504 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSELV 815 (1458)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 815 (1458)
.++|.|++|||.|||||.++.+.| +.++..+.+++|.|+|.|+++.+-+||.|++++||+|++.|+++|+....++.+.
T Consensus 690 LK~P~iIlLDEATSALDT~tER~I-QaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya 768 (790)
T KOG0056|consen 690 LKAPSIILLDEATSALDTNTERAI-QAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYA 768 (790)
T ss_pred hcCCcEEEEcchhhhcCCccHHHH-HHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHH
Confidence 999999999999999999998887 5678888899999999999999999999999999999999999999985566676
Q ss_pred HHHHH
Q 000504 816 RQMKA 820 (1458)
Q Consensus 816 ~~~~~ 820 (1458)
++-.+
T Consensus 769 ~MWq~ 773 (790)
T KOG0056|consen 769 DMWQA 773 (790)
T ss_pred HHHHH
Confidence 65543
No 100
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.4e-53 Score=487.00 Aligned_cols=238 Identities=38% Similarity=0.649 Sum_probs=228.9
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
|.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|.+||.++.+++.+++|+++
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999997656679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000504 1286 SIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRI 1365 (1458)
Q Consensus 1286 ~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1365 (1458)
+||||+|.+|++|+++|++|+...+++++|++++.+++.+++..+|+++|+.++++|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999999877889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHHHH
Q 000504 1366 LVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1366 LlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~~~ 1445 (1458)
|||||||++||+.++..+++.|++.+.+||||+||||++++..||||++|++|+++|+|+|++|+++ .+.|++++.+..
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhhcc
Confidence 9999999999999999999999998889999999999999999999999999999999999999984 589999998765
No 101
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=8.8e-51 Score=470.86 Aligned_cols=439 Identities=24% Similarity=0.407 Sum_probs=337.4
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE-------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK------- 660 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~------- 660 (1458)
..+++++.+-.|+. ...+++ ||++++||++|++|+||+|||||+++|.|.++|++|++ .++|+
T Consensus 3 ~~l~~~~itK~f~~--------~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI-~v~G~~v~~~sP 73 (501)
T COG3845 3 PALEMRGITKRFPG--------VVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEI-RVDGKEVRIKSP 73 (501)
T ss_pred ceEEEeccEEEcCC--------EEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceE-EECCEEeccCCH
Confidence 46889999888873 356677 99999999999999999999999999999999999997 89885
Q ss_pred -------EEEEcCCCCC-CCCcHHHHHhcCCCCC----------HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCC
Q 000504 661 -------KAYVPQSSWI-QTGTIRENILFGKDMR----------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1458)
Q Consensus 661 -------~ayv~Q~~~i-~~~Ti~enI~fg~~~~----------~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LS 722 (1458)
||+|.|++-+ .+.||.|||..|.+-. .++.++..+.++|.-|. .++...||
T Consensus 74 ~dA~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp-----------~~~V~dLs 142 (501)
T COG3845 74 RDAIRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDP-----------DAKVADLS 142 (501)
T ss_pred HHHHHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCc-----------cceeecCC
Confidence 5999999887 4679999999998632 23334444444444332 35667899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
=||||||.|-+|||++|+++|||||||.|-|...+++|+.+-+-...|+|||+|||.++++.. ||++-||+.|+++.
T Consensus 143 VG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvg-- 220 (501)
T COG3845 143 VGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVG-- 220 (501)
T ss_pred cchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEe--
Confidence 999999999999999999999999999999999999998654444569999999999999876 99999999999763
Q ss_pred cchhhhhhcchHHHHHHHHhhhhccCCCCCCCCcccccCccCccchhhhcccCCCCCCCCCCCCccchhhcCcchHHHHH
Q 000504 802 KYEDLIADQNSELVRQMKAHRKSLDQVNPPQEDKCLSRVPCQMSQITEERFARPISCGEFSGRSQDEDTELGRVKWTVYS 881 (1458)
Q Consensus 802 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~ 881 (1458)
+++...+....+..+++
T Consensus 221 t~~~~~~~t~~ela~lM--------------------------------------------------------------- 237 (501)
T COG3845 221 TVDPVAETTEEELAELM--------------------------------------------------------------- 237 (501)
T ss_pred eecCCCCCCHHHHHHHh---------------------------------------------------------------
Confidence 32211000000000000
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 882 AFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQR 961 (1458)
Q Consensus 882 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 961 (1458)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000504 962 LFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISI 1041 (1458)
Q Consensus 962 l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~ 1041 (1458)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 000504 1042 WYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLF 1121 (1458)
Q Consensus 1042 ~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~ 1121 (1458)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCC
Q 000504 1122 NFAFFLVLIILVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPE 1201 (1458)
Q Consensus 1122 ~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~ 1201 (1458)
+.+ .+ ..+.+ . ++.
T Consensus 238 -------------vG~-~v-------------------------------------------~~~~~--------~-~~~ 251 (501)
T COG3845 238 -------------VGR-EV-------------------------------------------VLRVV--------K-PPS 251 (501)
T ss_pred -------------cCC-cc-------------------------------------------ccccc--------c-CCC
Confidence 000 00 00000 0 111
Q ss_pred CCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeC-CCCCHHH
Q 000504 1202 WPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDI-SMIGLQD 1280 (1458)
Q Consensus 1202 wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI-~~i~l~~ 1280 (1458)
-|..--++++|+++.=+.+ -..+++|||++++||.+||.|=.|-|-+-|+.+|.|+..|.+|+|.++|.|+ ...+...
T Consensus 252 ~pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~ 330 (501)
T COG3845 252 TPGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRE 330 (501)
T ss_pred CCCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHH
Confidence 1233458999999875443 3579999999999999999999999999999999999999999999999998 6667777
Q ss_pred Hh-cceEEEccCCC----CccccHHHhcCcCCCC----------CHHHHHHHHHHcCcHHHHHh---cccccCccccCCC
Q 000504 1281 LR-SRLSIIPQDPM----LFQGTVRTNLDPLEQH----------SDQEIWEVINKCHLAEIVRQ---DQRLLDAPVAEDG 1342 (1458)
Q Consensus 1281 LR-~~i~iIpQdp~----LF~gTIR~NLdp~~~~----------sdeeI~~aL~~~~L~~~i~~---lp~gLdt~v~e~G 1342 (1458)
.| ..+++||.|.+ ..+-|+.+|+-+.... .-.++.+..+ +.+++ .+.+.++++
T Consensus 331 ~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~-----~li~~fdVr~~~~~~~a---- 401 (501)
T COG3845 331 RRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFAR-----ELIEEFDVRAPSPDAPA---- 401 (501)
T ss_pred HHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHH-----HHHHHcCccCCCCCcch----
Confidence 55 57999999984 5566999998543211 1122322221 11211 123344444
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000504 1343 ENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1420 (1458)
Q Consensus 1343 ~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~i 1420 (1458)
.+||||+.|++-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +++.|+.|+-+++.+.. ||||.||.+|++
T Consensus 402 ~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri 481 (501)
T COG3845 402 RSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRI 481 (501)
T ss_pred hhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCce
Confidence 4799999999999999999999999999999999999999999888764 68899999999999866 999999999999
Q ss_pred EEecChhH
Q 000504 1421 LEYDSPRQ 1428 (1458)
Q Consensus 1421 vE~g~p~~ 1428 (1458)
+....|++
T Consensus 482 ~~~~~~~~ 489 (501)
T COG3845 482 VGIVPPEE 489 (501)
T ss_pred eccccccc
Confidence 98887776
No 102
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=6.5e-48 Score=493.57 Aligned_cols=501 Identities=17% Similarity=0.160 Sum_probs=370.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 276 SLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSY-HYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRSALT 354 (1458)
Q Consensus 276 ~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~-~~g~~l~~~l~~~~~~~~l~~~~~~~~~~r~g~~iR~~L~ 354 (1458)
.+++..++.++.+++....|++.+.+++.+.+.+. ... ...+.+++++++..++.++ ..|...++..++|.-+.
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~-~~f~~~l~~~~l~~~~~~~~~~~----~~~~~~~~~~~~r~~l~ 171 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSP-RNFAWILFKWFLIAPPASFINSA----IKYLLKELKLRFRVRLT 171 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
Confidence 46667778888899999999999999998764331 001 1011222223333333333 33445566667777777
Q ss_pred HHHHHHhccc----c--cCCCCHHHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 000504 355 VLIYKRSMAI----K--FAGPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIF 427 (1458)
Q Consensus 355 ~~Iy~K~L~l----s--~~~~~~G~ivnlms~D~~ri~~~~~~-~~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i 427 (1458)
..++++.++- + ..+..+|++++.+++|++.+.+.+.. +..+...++.++.+++.|+..++|..++..++.+++
T Consensus 172 ~~l~~~~~~~~~~~~~~~~d~~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l 251 (659)
T TIGR00954 172 RYLYSKYLSGFTFYKVSNLDSRIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFA 251 (659)
T ss_pred HHHHHHHhCCCceEEeccCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 6666665542 1 11124799999999999999988754 455666777888888888877886666666666677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 428 VMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLFWA 507 (1458)
Q Consensus 428 ~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~~f~~~I~~~R~~El~~l~k~~~~~a~~~~~~~~ 507 (1458)
.+.+...+.+...+...+..+..++-....+|.++|++.||.|+-|+...+++.+.=++-.+...+.....+....+...
T Consensus 252 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 331 (659)
T TIGR00954 252 TGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNI 331 (659)
T ss_pred HHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 77778888888999999999999999999999999999999999999888887766444444444444444333322222
Q ss_pred HH----HHHHHHHHHHHHHh-c----CCCCHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 000504 508 SP----TLVSVITFGVCILL-K----TPLTSGAVLS-A---LATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDN 574 (1458)
Q Consensus 508 ~p----~~v~~~tF~~~~~~-~----~~L~~~~vft-~---lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e 574 (1458)
.. ..+..+..+..++. . +.++.+..+. . ..++..+..|+..+...+..+.++.++.+||.++++.++
T Consensus 332 i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~ 411 (659)
T TIGR00954 332 VAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLD 411 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 12222222232332 1 5688776544 2 334667789999999999999999999999999997533
Q ss_pred C-C-----C-CCCC-----------------CCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEE
Q 000504 575 Q-K-----K-PITE-----------------PTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVC 629 (1458)
Q Consensus 575 ~-~-----~-~~~~-----------------~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~iv 629 (1458)
+ . + .... .........|+++|++|+|+.+ .+.+++ |+++++||+++|+
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-------~~il~~isl~i~~Ge~~~Iv 484 (659)
T TIGR00954 412 DVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-------DVLIESLSFEVPSGNHLLIC 484 (659)
T ss_pred HHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-------CeeeecceEEECCCCEEEEE
Confidence 1 0 0 0000 0000122459999999999633 368999 9999999999999
Q ss_pred ccCCCChhHHHHHHhCCccCCCCcEEEEC--CEEEEEcCCCCCCCCcHHHHHhcCCC--------CCHHHHHHHHHHhhh
Q 000504 630 GSVGSGKSSLLSSILGEIPRISGAAIKVH--GKKAYVPQSSWIQTGTIRENILFGKD--------MRQSFYEEVLEGCAL 699 (1458)
Q Consensus 630 G~~GsGKSTLl~~llG~~~~~~G~~i~~~--g~~ayv~Q~~~i~~~Ti~enI~fg~~--------~~~~~y~~vl~~c~l 699 (1458)
||||||||||+++|+|+++|.+|++ ..+ ..++||+|+|+++++|++|||.++.. ..+++.+++++.+++
T Consensus 485 G~nGsGKSTLl~lL~Gl~~~~~G~i-~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l 563 (659)
T TIGR00954 485 GPNGCGKSSLFRILGELWPVYGGRL-TKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQL 563 (659)
T ss_pred CCCCCCHHHHHHHHhCCCCCCCCeE-eecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCC
Confidence 9999999999999999999999986 564 36899999999999999999999742 345666788888888
Q ss_pred hhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecc
Q 000504 700 NQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQ 779 (1458)
Q Consensus 700 ~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~ 779 (1458)
.+.++. |.|.+|..+ .+.+||||||||++||||++++|+++|||||||+||+++.+.+.+. +.. .++|+|+|||+
T Consensus 564 ~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~-l~~--~~~tvI~isH~ 638 (659)
T TIGR00954 564 THILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRL-CRE--FGITLFSVSHR 638 (659)
T ss_pred HHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHH--cCCEEEEEeCc
Confidence 877766 888888776 5779999999999999999999999999999999999998877654 433 38999999999
Q ss_pred cchhccCCEEEEEeC
Q 000504 780 LEFLDAADLVLVMKD 794 (1458)
Q Consensus 780 ~~~l~~~D~i~~l~~ 794 (1458)
++.++.||+|++|++
T Consensus 639 ~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 639 KSLWKYHEYLLYMDG 653 (659)
T ss_pred hHHHHhCCEEEEEeC
Confidence 999989999999973
No 103
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-49 Score=465.70 Aligned_cols=258 Identities=21% Similarity=0.371 Sum_probs=221.4
Q ss_pred HhhhHHHHHHHHhcCCCCCccccC------CCCC---CCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEE
Q 000504 1171 NKMISVERILQFTNIPSEAPLVIK------NSRP---SPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVV 1241 (1458)
Q Consensus 1171 ~~~~sveRi~~~~~~~~E~~~~~~------~~~~---~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIV 1241 (1458)
+.+.+++|+.+|...+.|.....+ ...+ +..||..+.|+++|++++|+++.+++|+|+||+|++||++||+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~Iv 114 (329)
T PRK14257 35 QKLNKYQRAFAWLKLPKQKKAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFI 114 (329)
T ss_pred hccccccchhhHHhcccccchhhhhcccccccccccccCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEE
Confidence 446677888888776655432111 1111 3469999999999999999765567999999999999999999
Q ss_pred CCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCC--CCCHHHHhcceEEEccCCCCccccHHHhcC--c-CCCCCH
Q 000504 1242 GRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDIS--MIGLQDLRSRLSIIPQDPMLFQGTVRTNLD--P-LEQHSD 1311 (1458)
Q Consensus 1242 GrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~--~i~l~~LR~~i~iIpQdp~LF~gTIR~NLd--p-~~~~sd 1311 (1458)
||||||||||+++|+|+++ |++|+|.|||+|+. ++++.++|++++||||+|.+|++|+++|++ | +..+++
T Consensus 115 G~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~ 194 (329)
T PRK14257 115 GPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGIND 194 (329)
T ss_pred CCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCCh
Confidence 9999999999999999997 57999999999997 456788999999999999999999999998 3 234555
Q ss_pred HHH-----HHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHH
Q 000504 1312 QEI-----WEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQT 1386 (1458)
Q Consensus 1312 eeI-----~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~ 1386 (1458)
++. .++++.++++ .++++.+++.|.+||||||||+|||||++++|+||||||||++||+++...+++.
T Consensus 195 ~~~~~~~~~~~l~~~~L~-------~~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~ 267 (329)
T PRK14257 195 RKILEKIVEKSLKSAALW-------DEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL 267 (329)
T ss_pred HHHHHHHHHHHHHHcCCc-------chhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 554 4566777764 3456778899999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 000504 1387 IREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSS 1435 (1458)
Q Consensus 1387 I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s 1435 (1458)
|++.++++|+|+|||+++++.+ ||||+||++|+++|.|+|++++.++..
T Consensus 268 i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~~~ 317 (329)
T PRK14257 268 ILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHPKN 317 (329)
T ss_pred HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCCc
Confidence 9999889999999999999988 999999999999999999999976653
No 104
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-45 Score=416.40 Aligned_cols=448 Identities=22% Similarity=0.295 Sum_probs=342.7
Q ss_pred HHHHHhcccccC---CCCHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000504 356 LIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLYI-HRIWLLPVQVFLALVILYKNLGAAPAFAALFSTIFVMVS 431 (1458)
Q Consensus 356 ~Iy~K~L~ls~~---~~~~G~ivnlms~D~~ri~~~~~~~-~~~w~~plqi~~al~lL~~~lG~~a~l~gl~~~~i~~~~ 431 (1458)
..|++.+.||-. .+.+|..---|.--..-|+...+++ ..+....+++++...++++..|||.+...++.+++...+
T Consensus 20 ~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t~vtv~lY~~f 99 (497)
T COG5265 20 VTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTTLVTVILYLLF 99 (497)
T ss_pred HHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHHHh
Confidence 345555555432 2244544333444444455555543 334455689999999999999988888777777666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhHHHHHhccHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Q 000504 432 NTPLANRQERFHSMIMEAKDAR-IKATSETLKSMRVLKLLSWEQEFLKKLLRL----REIERDSLKKYLYTCSAIAFLFW 506 (1458)
Q Consensus 432 ~~~~~~~~~~~q~~~m~~~D~R-v~~~sE~L~~ik~IKl~~wE~~f~~~I~~~----R~~El~~l~k~~~~~a~~~~~~~ 506 (1458)
.......--.++++.. ..|.. -...-+.|-|-.++|.|+-|+.+..+-.+. ++.+++......++...-..++.
T Consensus 100 tv~~s~wr~~~rr~~n-~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~Ln~gQ~~I~~ 178 (497)
T COG5265 100 TVIVSDWRTDFRRLMN-NADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVLNFGQTAIFS 178 (497)
T ss_pred heeehhhhHHHHHhhh-hhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 6655555555555444 44544 345668889999999999998877665544 33344333222222222222211
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCCCCCCCCC
Q 000504 507 ASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDN-QKKPITEPTSK 585 (1458)
Q Consensus 507 ~~p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e-~~~~~~~~~~~ 585 (1458)
. .+....+....-+..+.+|.+...-.-++...+..|++.+......+-|+++-.+++.+.+..+- ..+....++-.
T Consensus 179 ~--~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~pda~~L~ 256 (497)
T COG5265 179 T--GLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDAPDAPPLW 256 (497)
T ss_pred H--HHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccCCCCcccc
Confidence 1 11222233333445678999999999999999999999999999999999999999988887654 22221111111
Q ss_pred -CCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE---
Q 000504 586 -ASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--- 660 (1458)
Q Consensus 586 -~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--- 660 (1458)
.....|.+++++|.|++. .|.|++ ++.+++|+.++|+|++|+||||+++.|.+.+++.+|.+ .++|+
T Consensus 257 ~~~~g~v~F~~V~F~y~~~-------r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I-~id~qdir 328 (497)
T COG5265 257 PVRLGAVAFINVSFAYDPR-------RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSI-TIDGQDIR 328 (497)
T ss_pred ccccceEEEEEEEeecccc-------chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceE-EEcchhHH
Confidence 234579999999999875 789999 99999999999999999999999999999999999986 88885
Q ss_pred ----------EEEEcCCCCCCCCcHHHHHhcCCCC-CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 661 ----------KAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 661 ----------~ayv~Q~~~i~~~Ti~enI~fg~~~-~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
||.|||+..+||.|+..||.+|+|- .++...++.++.++...++.+|+|.+|.+||+|-.||||+||||
T Consensus 329 ~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqrv 408 (497)
T COG5265 329 DVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRV 408 (497)
T ss_pred HhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHHH
Confidence 6999999999999999999999875 34556677888889999999999999999999999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhhh
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIAD 809 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 809 (1458)
++||++.++|+|++|||.|||||.||.+.|- ..++...+|+|.+++.|+++.+-.||.|+||+||+|++.|+++|++.
T Consensus 409 aiar~ilk~p~il~~deatsaldt~te~~iq-~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll~- 486 (497)
T COG5265 409 AIARTILKNPPILILDEATSALDTHTEQAIQ-AALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELLA- 486 (497)
T ss_pred HHHHHHhcCCCEEEEehhhhHhhhhHHHHHH-HHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHHH-
Confidence 9999999999999999999999999987774 45677778999999999999999999999999999999999999998
Q ss_pred cchHHHH
Q 000504 810 QNSELVR 816 (1458)
Q Consensus 810 ~~~~~~~ 816 (1458)
.++.+.+
T Consensus 487 ~~g~ya~ 493 (497)
T COG5265 487 AGGLYAE 493 (497)
T ss_pred cCChHHH
Confidence 5655544
No 105
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=9.1e-47 Score=437.39 Aligned_cols=194 Identities=24% Similarity=0.392 Sum_probs=161.5
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|.++||+|+|+++ |.++++++|-|.++++|++|||||+|||||++++.+.+.|+.|.|.-.-.. +++
T Consensus 389 vi~~~nv~F~y~~~-~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDN-PMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KLP 456 (614)
T ss_pred eEEEeccccCCCCc-chhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cch
Confidence 48999999999865 479999999999999999999999999999999999999999988643221 233
Q ss_pred EEcc---CCCCccccHHHhcCc-CC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhcc
Q 000504 1287 IIPQ---DPMLFQGTVRTNLDP-LE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1287 iIpQ---dp~LF~gTIR~NLdp-~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1361 (1458)
+.-| +-.-++-|.-+++.| +. .-..+++...|.++||..-. .+.++ ++||+|||.|+++||.+++
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~------q~~p~----~~LS~Gqr~rVlFa~l~~k 526 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDA------QVVPM----SQLSDGQRRRVLFARLAVK 526 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccc------cccch----hhcccccchhHHHHHHHhc
Confidence 3334 334566677777755 33 35667888899999997433 34455 4799999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1362 KKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1362 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
+|.||||||||++||.+|-..+.++|.+. +.+||+|+|+...|.. +++|.+.++|.+..++
T Consensus 527 qP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 527 QPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred CCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecC
Confidence 99999999999999999999999999874 5599999999999977 8999999999987653
No 106
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-45 Score=381.68 Aligned_cols=217 Identities=29% Similarity=0.460 Sum_probs=193.1
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC-CCHHHHhcce
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM-IGLQDLRSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~-i~l~~LR~~i 1285 (1458)
-|+++|++.+|... .||||||++|++||++.|+||||||||||+++|.+|.+|++|+|.|||.++.. .++..+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999753 59999999999999999999999999999999999999999999999987743 3788999999
Q ss_pred EEEccCCCCccc-cHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~----~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
|+|+|...||+. |+-+|+... ...+ .+.-.+.|+++||.+....-| ..|||||+||++||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHHH
Confidence 999999999987 999998632 1222 233466789999998877766 36899999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNS 1434 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~ 1434 (1458)
|||.-+|+|+++|||||+|||+.-..+.+++++.. .+.|.|+|||.+....+ +|||+.||+|+++|.|+|+++..++.
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 99999999999999999999999999999998865 56799999999999987 99999999999999999999998876
Q ss_pred Ch
Q 000504 1435 SS 1436 (1458)
Q Consensus 1435 s~ 1436 (1458)
+.
T Consensus 229 ~~ 230 (240)
T COG1126 229 SE 230 (240)
T ss_pred CH
Confidence 43
No 107
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=4e-44 Score=409.95 Aligned_cols=240 Identities=48% Similarity=0.771 Sum_probs=224.1
Q ss_pred CCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhc
Q 000504 1204 SSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRS 1283 (1458)
Q Consensus 1204 ~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~ 1283 (1458)
..|.|+++|++++|+.....+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46789999999999754346999999999999999999999999999999999999999999999999999998889999
Q ss_pred ceEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCC
Q 000504 1284 RLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1363 (1458)
Q Consensus 1284 ~i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1363 (1458)
+++|+||+|.+|++|+++|+++.....+++++++++..++.+.+..+|.|+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876545667789999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHH
Q 000504 1364 RILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAE 1443 (1458)
Q Consensus 1364 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~~ 1443 (1458)
++|+|||||++||+++.+.+.+.|++..+++|+|+++|+++.+..||||++|++|++++.|+++++.+.+++.|+.++.+
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 99999999999999999999999998767899999999999999999999999999999999999998777888877653
No 108
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-44 Score=397.00 Aligned_cols=224 Identities=28% Similarity=0.477 Sum_probs=194.9
Q ss_pred EEEEeeeEEeCCC---CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC---HHHH
Q 000504 1208 IELENLLVQYNPT---LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG---LQDL 1281 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~---~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~---l~~L 1281 (1458)
|+++||++.|... ...+|+||||+|++||+.||+|+||||||||++++-++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999762 356999999999999999999999999999999999999999999999999888776 5567
Q ss_pred hcceEEEccCCCCcc-ccHHHhcC-cCC--CCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000504 1282 RSRLSIIPQDPMLFQ-GTVRTNLD-PLE--QHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1353 (1458)
Q Consensus 1282 R~~i~iIpQdp~LF~-gTIR~NLd-p~~--~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1353 (1458)
|++||+|+|++-|++ -||.+|+. |.. ..+.+ .+.+.|+.+||.|...+-| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 889999999999998 59999996 442 34444 4567888888877655444 57999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1354 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1354 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
+|||||..+|+||+.|||||+|||+|.+.|.+.|++.. -+-||++|||.++.+++ ||||.||++|+++|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999888643 47899999999999987 9999999999999999999999
Q ss_pred hcCCChH-HHHHH
Q 000504 1431 EDNSSSF-SKLVA 1442 (1458)
Q Consensus 1431 ~~~~s~F-~~l~~ 1442 (1458)
.++.... ++++.
T Consensus 231 ~~Pk~~~t~~fi~ 243 (339)
T COG1135 231 ANPKHAITQEFIG 243 (339)
T ss_pred cCcchHHHHHHHH
Confidence 8885433 33443
No 109
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.4e-43 Score=407.05 Aligned_cols=193 Identities=22% Similarity=0.333 Sum_probs=165.1
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcc
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSR 1284 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~ 1284 (1458)
...+++.+|+|.|.|+.++.++++++.+..-+++++||++|+||||+++++.+-.+|..|.+-+.+ |.+
T Consensus 360 ~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 446899999999999887899999999999999999999999999999999999999999988876 678
Q ss_pred eEEEccCCCCccccHHHhcC-------cCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1285 LSIIPQDPMLFQGTVRTNLD-------PLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1285 i~iIpQdp~LF~gTIR~NLd-------p~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
|++-.|..+=| ..-|.. -++..+++|+.+.|...|+..-+.. .+ + ..||||||-|+++|-
T Consensus 429 i~~f~Qhhvd~---l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~-----~s-i----~~LSGGQKsrvafA~ 495 (582)
T KOG0062|consen 429 IKYFAQHHVDF---LDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELAL-----QS-I----ASLSGGQKSRVAFAA 495 (582)
T ss_pred ecchhHhhhhH---HHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhh-----cc-c----cccCCcchhHHHHHH
Confidence 99999977533 222221 1233499999999999888654432 22 2 459999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1423 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~ 1423 (1458)
....+|.+|||||||+.||.++-..+-++|+.. +.-||+|+|+.+.+.. |+.+++.++|+|.-+
T Consensus 496 ~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~i 560 (582)
T KOG0062|consen 496 CTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTPI 560 (582)
T ss_pred HhcCCCcEEEecCCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEee
Confidence 999999999999999999999999999999874 3479999999999976 999999999999763
No 110
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.3e-43 Score=397.15 Aligned_cols=234 Identities=31% Similarity=0.541 Sum_probs=215.0
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+.+..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999988888889999999
Q ss_pred EccCCCCccccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEE
Q 000504 1288 IPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRIL 1366 (1458)
Q Consensus 1288 IpQdp~LF~gTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1366 (1458)
+||+|.+|+.|+++|+.... ..+.+++.++++..++.+.+..+|.++++.....+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999997543 34566778888889999999999999999888888999999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 000504 1367 VLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVA 1442 (1458)
Q Consensus 1367 lLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~ 1442 (1458)
||||||++||+.+...+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|++++++++ .+.|+.+++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 999999999999999999999988778999999999999988999999999999999999999865 567777654
No 111
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.9e-43 Score=391.26 Aligned_cols=221 Identities=60% Similarity=0.967 Sum_probs=209.2
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
|.|+++|++++|+....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56899999999975444699999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000504 1286 SIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRI 1365 (1458)
Q Consensus 1286 ~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1365 (1458)
+|+||+|.+|++|+++|++++...+++++.++++..++.+++..+|.|+++...+.+.+||+|||||++|||||+++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998777778889999999999999999999999999989999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecCh
Q 000504 1366 LVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSP 1426 (1458)
Q Consensus 1366 LlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p 1426 (1458)
|+|||||++||+.+.+.+.+.|++..++.|||+++|+++.+..||++++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999987778999999999999999999999999999998864
No 112
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-43 Score=411.60 Aligned_cols=260 Identities=21% Similarity=0.307 Sum_probs=218.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCCCCCCCCCCCCccEEEeeeEEEeCCc
Q 000504 525 TPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDN-QKKPITEPTSKASDVAIDIEAGEYAWDAR 603 (1458)
Q Consensus 525 ~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e-~~~~~~~~~~~~~~~~I~i~~~~fsw~~~ 603 (1458)
++++++++|++++.|+.+..|+..+|..... ..|++.|+..+| +.....+ ..+....|+++|++++|+..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~nls~~y~~~ 93 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE--DFNHANVFEIRNFNFWYMNR 93 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC--CCCcCceEEEEeeEEEecCC
Confidence 5689999999999999999999988866543 569999998766 2211111 11234579999999999743
Q ss_pred ccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCcc-----CCCCcEEEE---------------CCEEE
Q 000504 604 EENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKV---------------HGKKA 662 (1458)
Q Consensus 604 ~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~---------------~g~~a 662 (1458)
..+.|++ ||+|++||+++|+|+||||||||+++|+|+++ |++|++ .+ .+.++
T Consensus 94 ------~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I-~idG~~i~~~~~~~~~lr~~i~ 166 (329)
T PRK14257 94 ------TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEI-YFLGTNTRSKKISSLELRTRIG 166 (329)
T ss_pred ------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEE-EECCEEccccccchHhhhccEE
Confidence 3468999 99999999999999999999999999999986 468875 43 34589
Q ss_pred EEcCCCCCCCCcHHHHHhcCCCCC----HH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHH
Q 000504 663 YVPQSSWIQTGTIRENILFGKDMR----QS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARA 734 (1458)
Q Consensus 663 yv~Q~~~i~~~Ti~enI~fg~~~~----~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 734 (1458)
||||+||++++|++|||.|+..++ ++ .|+++++.|+|..+++ +.+++++.+|||||||||+||||
T Consensus 167 ~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~-------~~~~~~~~~LSgGqkqRl~LARA 239 (329)
T PRK14257 167 MVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVK-------DDLDKAGNALSGGQQQRLCIARA 239 (329)
T ss_pred EEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhh-------hhhhCCcccCCHHHHHHHHHHHH
Confidence 999999999999999999875332 22 2677788888765543 56789999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchhhhh
Q 000504 735 VYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 735 l~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
++++|+|+||||||++||+++.++ +.+++..+.+++|+|+|||+++++.. ||+|++|++|+|++.|+++++..
T Consensus 240 l~~~p~IlLLDEPts~LD~~~~~~-i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~ 313 (329)
T PRK14257 240 IALEPEVLLMDEPTSALDPIATAK-IEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFI 313 (329)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999887 46678877778999999999999887 99999999999999999999875
No 113
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-43 Score=367.60 Aligned_cols=220 Identities=26% Similarity=0.428 Sum_probs=198.2
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCC-----cEEEEcCeeCCC--CCH
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSG-----GRILIDGVDISM--IGL 1278 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~-----G~I~IDG~dI~~--i~l 1278 (1458)
..++++|+++.|.. ..+|+|||+.|++++.+|++|||||||||++++|-|+.+..+ |+|.+||.||-+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 46899999999974 459999999999999999999999999999999999999875 999999999977 578
Q ss_pred HHHhcceEEEccCCCCccccHHHhcCcCC---C----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1279 QDLRSRLSIIPQDPMLFQGTVRTNLDPLE---Q----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1279 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~----~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
-.||+++|+|.|.|.-|..||++|+.... . .-||-+.++|+++.|||.|.. .|+ +.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---rL~----~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---RLH----KSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---Hhh----CCccCCChhHHH
Confidence 89999999999999999999999997531 1 224567889999999999864 343 445679999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
||||||||.-+|+||+||||||+||+-+...|.+.|.+..++-|||+|||.+.-... +|+...+-.|+++|+|..+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999899999999999998755 9999999999999999999999
Q ss_pred hcCC
Q 000504 1431 EDNS 1434 (1458)
Q Consensus 1431 ~~~~ 1434 (1458)
.++.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 8764
No 114
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-42 Score=370.66 Aligned_cols=218 Identities=30% Similarity=0.477 Sum_probs=195.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+|+||+++|.+ ..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 799999999973 469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCCccc-cHHHhcCcCC---CCC----HHHHHHHHHHcCcH--HHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1288 IPQDPMLFQG-TVRTNLDPLE---QHS----DQEIWEVINKCHLA--EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~~---~~s----deeI~~aL~~~~L~--~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
|-|.--||.. ||.+|+..-. ..+ ++++.+.++.+||. ++..+.| ..|||||+||+.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHHH
Confidence 9999999987 9999996321 223 44567888889985 4666655 458999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHHhhcCC
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQLLEDNS 1434 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~Ll~~~~ 1434 (1458)
||..+|+||+||||.++||+-|...+|+-+.+.. -++|+|+|||+++... -+|||.+|++|+++.+|+|+++++++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 9999999999999999999999999999887643 3789999999999865 499999999999999999999999988
Q ss_pred ChHH
Q 000504 1435 SSFS 1438 (1458)
Q Consensus 1435 s~F~ 1438 (1458)
..|-
T Consensus 229 n~FV 232 (309)
T COG1125 229 NDFV 232 (309)
T ss_pred HHHH
Confidence 7773
No 115
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-41 Score=384.37 Aligned_cols=231 Identities=33% Similarity=0.539 Sum_probs=211.2
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+....++++|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999997543369999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCCCCccccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEE
Q 000504 1288 IPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRIL 1366 (1458)
Q Consensus 1288 IpQdp~LF~gTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1366 (1458)
+||+|.+|..|+++|+.... .++.+++.+.++.+++.+++..+|.++++.......+||+|||||++|||||+++|++|
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999997543 34566777888889999999999999999888888999999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 000504 1367 VLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSK 1439 (1458)
Q Consensus 1367 lLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~ 1439 (1458)
+|||||++||+.+...+.+.|++..++.|||++||+++.+..||+|++|++|++++.|+++++.++ .+.|+.
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~ 232 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAK 232 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhh
Confidence 999999999999999999999988778999999999999988999999999999999999999864 455543
No 116
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.7e-41 Score=376.08 Aligned_cols=207 Identities=61% Similarity=0.972 Sum_probs=188.4
Q ss_pred CCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHH
Q 000504 1202 WPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL 1281 (1458)
Q Consensus 1202 wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L 1281 (1458)
||..+.++++|++++|+....++++|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+||.++.+.+..++
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543469999999999999999999999999999999999999999999999999998888889
Q ss_pred hcceEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhcc
Q 000504 1282 RSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1282 R~~i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1361 (1458)
|++++|+||+|.+|++|+++|+..+..++++++.++++ +......||+||+||++||||+++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999998765555555555443 234456899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecCh
Q 000504 1362 KKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSP 1426 (1458)
Q Consensus 1362 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p 1426 (1458)
+|++|+|||||++||+++...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+|
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999987778999999999999988999999999999998875
No 117
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-41 Score=381.41 Aligned_cols=226 Identities=38% Similarity=0.618 Sum_probs=209.4
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
|.|+++|++++|... .++++|+||++++||+++|+|+||||||||+++|.|+++|.+|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 468999999999632 3599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEccCCCCccccHHHhcCcCC-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCC
Q 000504 1286 SIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1364 (1458)
Q Consensus 1286 ~iIpQdp~LF~gTIR~NLdp~~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1364 (1458)
+|+||+|.+|.+|+++|+.... ...++++.++++.+++.+++..+|.|+++.++....+||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997543 345677888999999999999999999999888889999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1365 ILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1365 ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
+|+|||||++||+.+.+.+.+.|++..+++|||+|||+++.+..||+|++|++|++++.|++++++++
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999999999987678999999999999988999999999999999998888754
No 118
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-41 Score=380.97 Aligned_cols=233 Identities=36% Similarity=0.604 Sum_probs=213.6
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+.+ ..+|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.+++..+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999999643 359999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EccCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEE
Q 000504 1288 IPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRIL 1366 (1458)
Q Consensus 1288 IpQdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1366 (1458)
+||+|.+|++|+++|+... ...+++++.++++.+++.+.+..+|.|+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999753 345677788899999999999999999999998888999999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 000504 1367 VLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVA 1442 (1458)
Q Consensus 1367 lLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~~ 1442 (1458)
+|||||++||+++...+.+.|++..++.|||+++|+++.+..||++++|++|++++.|+++++.+ ..+.|+.++.
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~-~~~~~~~~~~ 234 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA-KGGLYAEMWK 234 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh-cccHHHHHHh
Confidence 99999999999999999999988766789999999999998899999999999999999999886 4566665544
No 119
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.9e-41 Score=397.35 Aligned_cols=219 Identities=26% Similarity=0.436 Sum_probs=191.3
Q ss_pred EEEEeeeEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH---Hh
Q 000504 1208 IELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---LR 1282 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR 1282 (1458)
|+++|++++|+.+ ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cceEEEccCCCCcc-ccHHHhcCc-C--CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1283 SRLSIIPQDPMLFQ-GTVRTNLDP-L--EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1283 ~~i~iIpQdp~LF~-gTIR~NLdp-~--~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
++|++|||++.+|. .|+++|+.. . ...+ ++++.++++.+++.+.....| ..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999996 699999962 2 1223 234678899998876544333 469999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
|||||+.+|+||+||||||+||+.|...|.+.|++..+ +.|||+|||+++.+.. ||+|++|++|+++|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998643 7899999999999966 99999999999999999999987
Q ss_pred cCCChH
Q 000504 1432 DNSSSF 1437 (1458)
Q Consensus 1432 ~~~s~F 1437 (1458)
++...+
T Consensus 231 ~p~~~~ 236 (343)
T TIGR02314 231 HPKTPL 236 (343)
T ss_pred CCCcHH
Confidence 665544
No 120
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=7.4e-41 Score=379.12 Aligned_cols=232 Identities=34% Similarity=0.600 Sum_probs=210.0
Q ss_pred EEEEeeeEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1208 IELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
|+++|++++|+.. ..++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+....|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 5789999999653 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000504 1287 IIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRI 1365 (1458)
Q Consensus 1287 iIpQdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1365 (1458)
|+||+|.+|+.|+++|+... .....+++.+.++..++.+++..+|.|+++.......+||+|||||++||||++++|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999753 23456678888899999999999999999988888899999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHH
Q 000504 1366 LVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKL 1440 (1458)
Q Consensus 1366 LlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l 1440 (1458)
|+|||||++||+.+.+.+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|+++++.+. .+..+.+
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 234 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKL 234 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHH
Confidence 9999999999999999999999987678999999999999989999999999999999999998853 3444443
No 121
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.3e-41 Score=374.58 Aligned_cols=213 Identities=31% Similarity=0.523 Sum_probs=188.6
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.++++|++++|+. .++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.||.+++.+++.++++
T Consensus 2 ~L~~~~ls~~y~~--~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGG--KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECC--eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 3789999999973 56999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCC-ccccHHHhcC----c----CCCCC--HH-HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1287 IIPQDPML-FQGTVRTNLD----P----LEQHS--DQ-EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1287 iIpQdp~L-F~gTIR~NLd----p----~~~~s--de-eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
|+||++.. |.-||+|-+. | +...+ |+ .+.+||+.+++.++..+ .+. .||||||||++
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-------~~~----~LSGGerQrv~ 148 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-------PVD----ELSGGERQRVL 148 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-------ccc----ccChhHHHHHH
Confidence 99999754 4558888764 2 22222 33 47888999999887643 343 49999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhh-hhcCEEEEEeCCEEEEecChhHHhh
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTV-IDNDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti-~~~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
|||||.++|+||+|||||++||....-.+++.+++.. ++.|||+|.|+++.. +.||++++|++|+++..|+|++.+.
T Consensus 149 iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 149 IARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999999999999999999999999865 469999999999876 5599999999999999999999885
Q ss_pred c
Q 000504 1432 D 1432 (1458)
Q Consensus 1432 ~ 1432 (1458)
.
T Consensus 229 ~ 229 (258)
T COG1120 229 E 229 (258)
T ss_pred H
Confidence 3
No 122
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-41 Score=371.96 Aligned_cols=209 Identities=30% Similarity=0.456 Sum_probs=184.6
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|+.+ + ||+||||++++||.+||+||||||||||+++++|++.|++|+|.++|.+++.... |.+||
T Consensus 4 ~i~v~nl~v~y~~~-~-vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR-P-VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE-e-eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 58999999999865 4 9999999999999999999999999999999999999999999999998766432 57999
Q ss_pred EEccCC---CCccccHHHhcCcCC--------C---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1287 IIPQDP---MLFQGTVRTNLDPLE--------Q---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1287 iIpQdp---~LF~gTIR~NLdp~~--------~---~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
||||.. .-|.-||++-+.... . .+.+++.+||+++++.++. |.++++ |||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-------~r~i~~----LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-------DRQIGE----LSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-------CCcccc----cCcHHHHH
Confidence 999965 357889999876431 1 1247899999999999875 455664 99999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC-CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS-RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~-~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
+.|||||+++|++|+|||||+++|+.++..|.+.|++..+ +|||++|+|+++.+++ +|+|+.| ++++...|+|++.+
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhcc
Confidence 9999999999999999999999999999999999988764 8999999999999976 9999999 57889999999998
Q ss_pred hc
Q 000504 1431 ED 1432 (1458)
Q Consensus 1431 ~~ 1432 (1458)
..
T Consensus 227 ~~ 228 (254)
T COG1121 227 TE 228 (254)
T ss_pred CH
Confidence 64
No 123
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=7.9e-41 Score=374.35 Aligned_cols=219 Identities=32% Similarity=0.531 Sum_probs=201.1
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
|.|+++|++++|+....++++|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999964334599999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEEccCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCC
Q 000504 1286 SIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1364 (1458)
Q Consensus 1286 ~iIpQdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1364 (1458)
+|+||+|.+|..|+++|+... ...+.+++.++++..++.+.....|.|+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 999999999989999999754 2345667888999999999999999999999988889999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEec
Q 000504 1365 ILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1365 ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g 1424 (1458)
+|||||||++||..+...+.+.|++..+++|||++||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988789999999999998764
No 124
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.4e-40 Score=414.33 Aligned_cols=199 Identities=25% Similarity=0.322 Sum_probs=168.2
Q ss_pred CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEEcCeeCCCCCHHHHhcceEEEccCCC-Ccc
Q 000504 1220 TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE--PSGGRILIDGVDISMIGLQDLRSRLSIIPQDPM-LFQ 1296 (1458)
Q Consensus 1220 ~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~--p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~-LF~ 1296 (1458)
+....|+|||=-++||--.|++|.||||||||++.|.+-.+ ..+|+|+|||.+..+ +..++++|||.|++. +=.
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 44568999999999999999999999999999999999764 347999999998765 678999999999874 545
Q ss_pred ccHHHhcCc------CCCCCHHH----HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCC-CE
Q 000504 1297 GTVRTNLDP------LEQHSDQE----IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK-RI 1365 (1458)
Q Consensus 1297 gTIR~NLdp------~~~~sdee----I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~-~I 1365 (1458)
-||||-|.. -.+.+++| +.++++..+|.++- |..||.-|..||+.||.||.||--|+.|| .|
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrLTIgVELvA~P~~i 951 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRLTIGVELVANPSSI 951 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhceeeEEEEEecCCcee
Confidence 599999852 13445544 56677777776553 56799989999999999999999999999 89
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhh--hhcCEEEEEeC-CEEEEecChhH
Q 000504 1366 LVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTV--IDNDLVLVLDE-GKVLEYDSPRQ 1428 (1458)
Q Consensus 1366 LlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti--~~~DrVlvL~~-G~ivE~g~p~~ 1428 (1458)
|.||||||+||+++...|.+++|+.. .|+||++.-|+++.. +.+|+++.|++ |+.|.+|++-+
T Consensus 952 lFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 952 LFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99999999999999999999999854 689999999998864 56999999975 68999988544
No 125
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-40 Score=357.46 Aligned_cols=225 Identities=28% Similarity=0.446 Sum_probs=189.2
Q ss_pred cEEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC-HHHHhc
Q 000504 1207 KIELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG-LQDLRS 1283 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~-l~~LR~ 1283 (1458)
.++++|+++.|+... .++|+||||+|.+||.+||||+||||||||.++|.|+.+|++|+|.+||.+..... .+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 478999999997643 15999999999999999999999999999999999999999999999997766543 346788
Q ss_pred ceEEEccCCCC-c--cccHHHhcC-cCCC----CCHHHHHHHHHHcCcHHHH-HhcccccCccccCCCCCCChhHHHHHH
Q 000504 1284 RLSIIPQDPML-F--QGTVRTNLD-PLEQ----HSDQEIWEVINKCHLAEIV-RQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1284 ~i~iIpQdp~L-F--~gTIR~NLd-p~~~----~sdeeI~~aL~~~~L~~~i-~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
.+.+|+|||.- + .-||++-|. |... -..++++++|+.+||.+-. .+.| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 99999999952 2 226666663 3322 2355699999999997644 3333 359999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCC--cEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSR--CTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~--~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
|||||.-+|++||||||||+||....+.|.+.+.+..++ -|.|+|||++..+.. ||||+||++|+++|.++-.++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999999999999876654 499999999999977 99999999999999999999997
Q ss_pred cCCChHHHHHH
Q 000504 1432 DNSSSFSKLVA 1442 (1458)
Q Consensus 1432 ~~~s~F~~l~~ 1442 (1458)
.+...+.+...
T Consensus 232 ~~~h~ytr~Ll 242 (252)
T COG1124 232 HPSHPYTRELL 242 (252)
T ss_pred CCccHHHHHHH
Confidence 75556655443
No 126
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1e-40 Score=375.14 Aligned_cols=211 Identities=31% Similarity=0.493 Sum_probs=184.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccC-----CCCCcEEEEcCeeCCCCC--HHH
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV-----EPSGGRILIDGVDISMIG--LQD 1280 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~-----~p~~G~I~IDG~dI~~i~--l~~ 1280 (1458)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.+||.++...+ ...
T Consensus 1 i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGD--KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 578999999964 35999999999999999999999999999999999999 999999999999998876 567
Q ss_pred HhcceEEEccCCCCccccHHHhcCcCC---C-C----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1281 LRSRLSIIPQDPMLFQGTVRTNLDPLE---Q-H----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1281 LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
+|++++|+||+|.+|..|+++|+.... . . .++++.++++.+++.+.....++ +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHHH
Confidence 889999999999999889999996421 1 1 13457788888888765443221 35799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
++|||||+++|++|+|||||++||+++...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+|+++
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999999987656899999999999865 999999999999999998764
No 127
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-40 Score=354.11 Aligned_cols=224 Identities=30% Similarity=0.500 Sum_probs=194.9
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH---HH
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DL 1281 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~L 1281 (1458)
.-.|++++|+++|.. ..|++||||+|++||..||+|+||||||||++++.|+..|++|+|.|+|.||.+++-. .+
T Consensus 6 ~~~I~vr~v~~~fG~--~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 6 EPLIEVRGVTKSFGD--RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred cceEEEeeeeeecCC--EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 346999999999964 4699999999999999999999999999999999999999999999999999998864 57
Q ss_pred hcceEEEccCCCCccc-cHHHhcC-cCCCC---CHHHHH----HHHHHcCcHHHHH-hcccccCccccCCCCCCChhHHH
Q 000504 1282 RSRLSIIPQDPMLFQG-TVRTNLD-PLEQH---SDQEIW----EVINKCHLAEIVR-QDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1282 R~~i~iIpQdp~LF~g-TIR~NLd-p~~~~---sdeeI~----~aL~~~~L~~~i~-~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
|+++|++.|...||+. ||+||+. |..+| +++++. .-|+.+||...+. ..| +.||||.+.
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~K 152 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRK 152 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHH
Confidence 9999999999999987 9999996 55444 455443 4567788876632 233 459999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
|++||||+.-+|+||++|||||+|||-+...+-+.|++.. -+.|+|+|||+++++.. ||||+++.+|+|+-.|+|++
T Consensus 153 RvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~e 232 (263)
T COG1127 153 RVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEE 232 (263)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999988887653 37899999999999976 89999999999999999999
Q ss_pred HhhcCCChHHHHH
Q 000504 1429 LLEDNSSSFSKLV 1441 (1458)
Q Consensus 1429 Ll~~~~s~F~~l~ 1441 (1458)
|.+.++...++.+
T Consensus 233 l~~sd~P~v~qf~ 245 (263)
T COG1127 233 LLASDDPWVRQFF 245 (263)
T ss_pred HHhCCCHHHHHHh
Confidence 9988776555544
No 128
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=389.81 Aligned_cols=218 Identities=27% Similarity=0.407 Sum_probs=184.3
Q ss_pred CccEEEEeeeEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC-----
Q 000504 1205 SGKIELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI----- 1276 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----- 1276 (1458)
...|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 34599999999997432 3599999999999999999999999999999999999999999999999998753
Q ss_pred -----------CHHHHhcceEEEccCC--CCccccHHHhcCcCC---CCCHHH----HHHHHHHcCcHHHHHhcccccCc
Q 000504 1277 -----------GLQDLRSRLSIIPQDP--MLFQGTVRTNLDPLE---QHSDQE----IWEVINKCHLAEIVRQDQRLLDA 1336 (1458)
Q Consensus 1277 -----------~l~~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sdee----I~~aL~~~~L~~~i~~lp~gLdt 1336 (1458)
....+|++++|+||+| .+|++|+++|+.... ..++++ +.++++.+++.+ .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~ 168 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD----------S 168 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------h
Confidence 3567899999999998 689999999996421 223333 233444444421 2
Q ss_pred cccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-hcCEEEE
Q 000504 1337 PVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI-DNDLVLV 1414 (1458)
Q Consensus 1337 ~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~-~~DrVlv 1414 (1458)
.....+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|++.. +++|||+|||+++.+. .||+|++
T Consensus 169 ~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~v 248 (320)
T PRK13631 169 YLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIV 248 (320)
T ss_pred HhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEE
Confidence 2445567899999999999999999999999999999999999999999998753 5789999999999874 5999999
Q ss_pred EeCCEEEEecChhHHhhc
Q 000504 1415 LDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1415 L~~G~ivE~g~p~~Ll~~ 1432 (1458)
|++|++++.|+|++++++
T Consensus 249 l~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 249 MDKGKILKTGTPYEIFTD 266 (320)
T ss_pred EECCEEEEeCCHHHHhcC
Confidence 999999999999998754
No 129
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=348.50 Aligned_cols=202 Identities=29% Similarity=0.378 Sum_probs=169.0
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE--------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1458)
.|+++|.+-+|.. ..+|++ |++|++||+++||||+||||||||++|.|+.++++|++ .++|.
T Consensus 2 mi~i~~l~K~fg~--------~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I-~i~g~~~~~~~~~ 72 (240)
T COG1126 2 MIEIKNLSKSFGD--------KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSI-TVDGEDVGDKKDI 72 (240)
T ss_pred eEEEEeeeEEeCC--------eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceE-EECCEeccchhhH
Confidence 4789999988864 468999 99999999999999999999999999999999999996 88883
Q ss_pred ------EEEEcCCCCCCC-CcHHHHHhcCCC----CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 661 ------KAYVPQSSWIQT-GTIRENILFGKD----MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 661 ------~ayv~Q~~~i~~-~Ti~enI~fg~~----~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
+|+|+|+..+|. .||.|||..+.- ..+ ++-.+.++..+|.+..+ .....|||||
T Consensus 73 ~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~-----------~yP~qLSGGQ 141 (240)
T COG1126 73 LKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKAD-----------AYPAQLSGGQ 141 (240)
T ss_pred HHHHHhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhh-----------hCccccCcHH
Confidence 589999988864 699999998742 222 22233444555544443 4456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccch
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYE 804 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~ 804 (1458)
||||||||||.-+|+++|+|||||||||+....+.+-.......|.|.|+|||++.|... ||||+.|++|+|++.|+++
T Consensus 142 qQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~ 221 (240)
T COG1126 142 QQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPE 221 (240)
T ss_pred HHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHH
Confidence 999999999999999999999999999999888876433444468999999999999987 9999999999999999999
Q ss_pred hhhhhcc
Q 000504 805 DLIADQN 811 (1458)
Q Consensus 805 ~l~~~~~ 811 (1458)
++..++.
T Consensus 222 ~~f~~p~ 228 (240)
T COG1126 222 EFFDNPK 228 (240)
T ss_pred HHhcCCC
Confidence 9987433
No 130
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-40 Score=374.17 Aligned_cols=212 Identities=31% Similarity=0.443 Sum_probs=184.4
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCH---HHHhcc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL---QDLRSR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l---~~LR~~ 1284 (1458)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 578999999963 359999999999999999999999999999999999999999999999999987764 567899
Q ss_pred eEEEccCCCCccc-cHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000504 1285 LSIIPQDPMLFQG-TVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1355 (1458)
Q Consensus 1285 i~iIpQdp~LF~g-TIR~NLdp~----~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1355 (1458)
++|+||+|.+|.+ |+++|+... ...+ ++++.++++.+++.+... ..+ .+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~LSgG~~qrv~i 147 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAED-------LYP----AELSGGMKKRVAL 147 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhc-------CCh----hhCCHHHHHHHHH
Confidence 9999999999986 999999632 1123 234567778877755432 223 4699999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1356 ARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1356 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
||||+++|+||||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 148 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 148 ARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999999998643 7899999999999876 999999999999999999998754
No 131
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-40 Score=368.45 Aligned_cols=215 Identities=32% Similarity=0.490 Sum_probs=194.8
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCC-CCCHHHHhcce
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDIS-MIGLQDLRSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~-~i~l~~LR~~i 1285 (1458)
.|+++|++|+|.++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 48999999999877 77999999999999999999999999999999999999999999999999998 48899999999
Q ss_pred EEEccCC--CCccccHHHhcCcCC---CCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1286 SIIPQDP--MLFQGTVRTNLDPLE---QHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1286 ~iIpQdp--~LF~gTIR~NLdp~~---~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
|+|.|+| .+|..||.+.+.... ..+.+ .+.++|+.+++.++..+.| .+||||||||++||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHhh
Confidence 9999999 799999999997542 23443 4778899999987743333 57999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCC--cEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREETSR--CTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1433 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~--~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~ 1433 (1458)
.+|..+|+|||||||||+||+...+.+.+.+++..++ .|+|+|||+++.+.. |||+++|++|+++.+|+|++++++.
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 9999999999999999999999999999999987544 699999999999988 9999999999999999999998754
No 132
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-40 Score=380.17 Aligned_cols=216 Identities=27% Similarity=0.443 Sum_probs=196.6
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++||+.+|.+.. +++|+|++|+.||.++++||||||||||+++|.||.+|++|+|.|||.|++++++++ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999997543 999999999999999999999999999999999999999999999999999998886 7899
Q ss_pred EEccCCCCccc-cHHHhcCcC-C------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPL-E------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~-~------~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
+|+|++.||+. ||++|+... . +.-++++.++++..++.+...+.|. .||||||||++||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHHH
Confidence 99999999987 999999742 2 1235678899999999999888874 589999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSS 1435 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s 1435 (1458)
|.++|++++||||.|+||......+...|++..+ +.|+|.|||+....+. +|||.||.+|+|.+.|+|.|+.+++..
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 9999999999999999999999999888887543 5799999999888776 999999999999999999999999887
Q ss_pred hH
Q 000504 1436 SF 1437 (1458)
Q Consensus 1436 ~F 1437 (1458)
.|
T Consensus 228 ~f 229 (338)
T COG3839 228 LF 229 (338)
T ss_pred hh
Confidence 77
No 133
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-40 Score=371.41 Aligned_cols=221 Identities=31% Similarity=0.509 Sum_probs=192.4
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+..++|+.++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCCCccccHHHhcCcCC---CCCHHHHHHHHHHcCcH-HHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccC
Q 000504 1287 IIPQDPMLFQGTVRTNLDPLE---QHSDQEIWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKK 1362 (1458)
Q Consensus 1287 iIpQdp~LF~gTIR~NLdp~~---~~sdeeI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~ 1362 (1458)
|+||+|.+|+.|+++|+.... ...++++.+.++..++. +... .....||+|||||++||||++++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYAT-----------RDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhh-----------CCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999997422 22345677788887774 2221 23457999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 000504 1363 KRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSK 1439 (1458)
Q Consensus 1363 ~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~ 1439 (1458)
|++|||||||++||..+...+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|++.+++.++...+.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 99999999999999999999999998754 37899999999999875 9999999999999999999998765544544
Q ss_pred H
Q 000504 1440 L 1440 (1458)
Q Consensus 1440 l 1440 (1458)
.
T Consensus 230 ~ 230 (241)
T PRK14250 230 L 230 (241)
T ss_pred H
Confidence 3
No 134
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-40 Score=373.23 Aligned_cols=219 Identities=24% Similarity=0.415 Sum_probs=192.5
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC---CCCcEEEEcCeeCCCCCHHHHhc
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE---PSGGRILIDGVDISMIGLQDLRS 1283 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~---p~~G~I~IDG~dI~~i~l~~LR~ 1283 (1458)
.|+++|++++|+. +++|+|+||++++||++||+|+||||||||+++|+|+++ |++|+|.+||.++...+....|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 3789999999963 469999999999999999999999999999999999985 68999999999999888888899
Q ss_pred ceEEEccCCCCccccHHHhcCcCC---C------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1284 RLSIIPQDPMLFQGTVRTNLDPLE---Q------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1284 ~i~iIpQdp~LF~gTIR~NLdp~~---~------~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
+++|+||+|.+|..|+++|+.... . ..++++.++++.+++.+.+..+ ....+.+||+|||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDK-------LKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHH-------hcCCcccCCHHHHHHHH
Confidence 999999999999999999996421 1 1233577888998886655432 23345689999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1433 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~ 1433 (1458)
|||||+++|++|+|||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 232 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENP 232 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999999999987678999999999998864 9999999999999999999998654
Q ss_pred C
Q 000504 1434 S 1434 (1458)
Q Consensus 1434 ~ 1434 (1458)
.
T Consensus 233 ~ 233 (246)
T PRK14269 233 K 233 (246)
T ss_pred C
Confidence 3
No 135
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-40 Score=379.67 Aligned_cols=215 Identities=26% Similarity=0.417 Sum_probs=190.6
Q ss_pred cEEEEeeeEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1207 KIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
.|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999643 24599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEccCC--CCccccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1286 SIIPQDP--MLFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1286 ~iIpQdp--~LF~gTIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
+|+||+| .++..|+++|+.... ..+ ++++.++++.+++.++....| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 356679999997421 122 345788899999877654433 47999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++++.|+++++.++
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999988643 7899999999999988999999999999999999998764
No 136
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=6.5e-40 Score=368.43 Aligned_cols=217 Identities=32% Similarity=0.522 Sum_probs=197.4
Q ss_pred CCccEEEEeeeEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHh
Q 000504 1204 SSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLR 1282 (1458)
Q Consensus 1204 ~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR 1282 (1458)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 35789999999999643 23699999999999999999999999999999999999999999999999999888777888
Q ss_pred cceEEEccCCCCccccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhcc
Q 000504 1283 SRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1283 ~~i~iIpQdp~LF~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1361 (1458)
++++|+||+|.+|++|+++|++.. .....+++++..+..++.+++..+|.|+++.+.....+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999843 3344556677777788899999998889888888889999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEE
Q 000504 1362 KKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKV 1420 (1458)
Q Consensus 1362 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~i 1420 (1458)
+|++|+|||||++||+++...+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987777899999999999988999999999974
No 137
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=5.8e-37 Score=371.14 Aligned_cols=467 Identities=20% Similarity=0.188 Sum_probs=329.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChh------hHHHHHhhhhhHHhhhh
Q 000504 928 QLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSS------RILNRCSTDQSTVDTDI 1001 (1458)
Q Consensus 928 ~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G------~ilnR~s~D~~~id~~l 1001 (1458)
..+.+|..++++.......+.++......+.-..+-..++++-+..- .||--...| ..=+|+..|+...-..-
T Consensus 87 ~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~-~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t 165 (604)
T COG4178 87 QQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR-RYYRLAQAGGIGLIDNPDQRIQEDIRNFTETT 165 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHhcccccCCCChHHhHHHHHHHHHhhH
Confidence 45677888888888888888888888888888888888888888766 444443333 23368888887776655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------------hHHHH-HHHHHHH----HHHHHHHHHHHHHHHHHHHHhhhh
Q 000504 1002 PYRLAGLAFALIQLLSIIILMSQAA--------------WQVFP-LFLVILG----ISIWYQAYYITTARELARMVGTRK 1062 (1458)
Q Consensus 1002 ~~~l~~~~~~~~~~i~~~~v~~~~~--------------~~~~~-v~~p~~~----l~~~~~~~y~~~sr~l~rl~~~~~ 1062 (1458)
-.....++.++++++...+++.-.+ +.+++ +++..++ +..++.+...+-.-+-.+.++.-|
T Consensus 166 ~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR 245 (604)
T COG4178 166 LDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFR 245 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHH
Confidence 5555566666666666555554211 11111 1111111 122333334444444444444444
Q ss_pred chHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcC
Q 000504 1063 APILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLI-ILVTLPRSAID 1141 (1458)
Q Consensus 1063 spl~~~~~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~-~~~~~~~~~~~ 1141 (1458)
. ...-.-+....|-.|+.|+...++..+..+.-.+.+......+.++...-...+-+.+.+..+ .+-....|.++
T Consensus 246 ~----~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~ 321 (604)
T COG4178 246 Y----SLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQIT 321 (604)
T ss_pred H----HHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcCh
Confidence 3 344455677788888888777666666555555444444444444444333333222211111 12223456777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcC------CCCCccccCCCCCCCCCCCCccEEEEeeeE
Q 000504 1142 PSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNI------PSEAPLVIKNSRPSPEWPSSGKIELENLLV 1215 (1458)
Q Consensus 1142 ~~~~gl~l~y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~------~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~ 1215 (1458)
-|-...+.+-..++...+.|++.++..+.+-.....|+.++.+. +.+.+.... .+....-.....|+++|+++
T Consensus 322 ~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~nl~l 400 (604)
T COG4178 322 FGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTG-RRIDFDDNADHGITLENLSL 400 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccc-ccccccccccceeEEeeeeE
Confidence 77777777777788889999999999999999999999998741 222111100 00000000146799999999
Q ss_pred EeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCc
Q 000504 1216 QYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLF 1295 (1458)
Q Consensus 1216 ~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF 1295 (1458)
.-+++. ..+++++|.++|||.+-|.|+||||||||+++|.|+.+.-+|+|.+-. -+.+-++||.|.+=
T Consensus 401 ~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p 468 (604)
T COG4178 401 RTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLP 468 (604)
T ss_pred ECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCC
Confidence 987655 689999999999999999999999999999999999999999987651 12579999999999
Q ss_pred cccHHHhcC-cCC--CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcC
Q 000504 1296 QGTVRTNLD-PLE--QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEAT 1372 (1458)
Q Consensus 1296 ~gTIR~NLd-p~~--~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaT 1372 (1458)
.||+||-|. |.. .++|+|+.++|.+|+|.+++.++.+ .+. =..-||+||||||++||.+|+||++++|||||
T Consensus 469 ~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~~~----W~~vLS~GEqQRlafARilL~kP~~v~LDEAT 543 (604)
T COG4178 469 QGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-EDR----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEAT 543 (604)
T ss_pred CccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-cCc----HhhhcChhHHHHHHHHHHHHcCCCEEEEecch
Confidence 999999996 543 3899999999999999999998743 222 23459999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeC
Q 000504 1373 ASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDE 1417 (1458)
Q Consensus 1373 sslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~ 1417 (1458)
|+||.+++..+.+.++++..++|||.|+||.....-.++.+-+++
T Consensus 544 sALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 544 SALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred hccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 999999999999999999999999999999777666777666543
No 138
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-40 Score=388.18 Aligned_cols=221 Identities=26% Similarity=0.437 Sum_probs=189.7
Q ss_pred EEEEeeeEEeCC--CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH---Hh
Q 000504 1208 IELENLLVQYNP--TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---LR 1282 (1458)
Q Consensus 1208 I~~~nvs~~Y~~--~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR 1282 (1458)
|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cceEEEccCCCCcc-ccHHHhcCcC---CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1283 SRLSIIPQDPMLFQ-GTVRTNLDPL---EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1283 ~~i~iIpQdp~LF~-gTIR~NLdp~---~~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
++++|+||+|.+|. .|+++|+... ...++ +++.+.++..++.+.... . ..+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-------~----~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADR-------Y----PAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhC-------C----hhhCCHHHHHHHH
Confidence 89999999999986 6999999632 12222 356677777777654432 2 2469999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
|||||+++|+||+|||||++||+.+...+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998643 7899999999999876 99999999999999999999987
Q ss_pred cCCChHHH
Q 000504 1432 DNSSSFSK 1439 (1458)
Q Consensus 1432 ~~~s~F~~ 1439 (1458)
++...+.+
T Consensus 231 ~~~~~~~~ 238 (343)
T PRK11153 231 HPKHPLTR 238 (343)
T ss_pred CCCcHHHH
Confidence 65544433
No 139
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.4e-39 Score=353.65 Aligned_cols=204 Identities=29% Similarity=0.435 Sum_probs=175.9
Q ss_pred EEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH---HH-
Q 000504 1208 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DL- 1281 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~L- 1281 (1458)
++++||+..|..+. ..+|+|+||+|++||.|+|+||||||||||+++|-++-.|++|.|.++|.|+..++-+ .+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996543 3699999999999999999999999999999999999999999999999999999853 33
Q ss_pred hcceEEEccCCCCccc-cHHHhcC-c--CCCCC----HHHHHHHHHHcCcHHHHH-hcccccCccccCCCCCCChhHHHH
Q 000504 1282 RSRLSIIPQDPMLFQG-TVRTNLD-P--LEQHS----DQEIWEVINKCHLAEIVR-QDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1282 R~~i~iIpQdp~LF~g-TIR~NLd-p--~~~~s----deeI~~aL~~~~L~~~i~-~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
|++||+|+|+..|++. |++||+. | +.... .+.+.+.++.+++.+... ..| ..||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHHH
Confidence 5679999999998876 9999987 2 22222 345666777778876544 223 4699999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEEEE
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKVLE 1422 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE 1422 (1458)
+||||||+.+|+|++.||||++||.+|.+.|.+.+++.. .++|+|+|||+......|||++.|.+|++.+
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999874 3689999999999999999999999999543
No 140
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.6e-40 Score=366.42 Aligned_cols=210 Identities=24% Similarity=0.355 Sum_probs=182.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++||+++|+.+..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++... ..++|++++|
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEEE
Confidence 578999999965324699999999999999999999999999999999999999999999999998764 3667889999
Q ss_pred EccCCCCc-cccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLF-QGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF-~gTIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+| ..|+++|+.... ..+ ++++.++++..++.+.. ++.+ .+||+|||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-------NKRA----RTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-------hChh----hhCCHHHHHHHHHHHHH
Confidence 99999998 579999986321 122 24567788888876543 3333 46999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
+++|++|+|||||++||+.+.+.+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999987777999999999999865 999999999999999998875
No 141
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=386.12 Aligned_cols=218 Identities=22% Similarity=0.364 Sum_probs=191.7
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|+.+ ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++..++.+ +++++
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 38999999999432 4599999999999999999999999999999999999999999999999999987764 47899
Q ss_pred EEccCCCCccc-cHHHhcCcC-C--CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPL-E--QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~-~--~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
||||++.+|.. |+++|+... . ..+ ++++.++++.+++.++..+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 999999742 1 123 245778899999987766555 3699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSS 1435 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s 1435 (1458)
|+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++++++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPAS 228 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCcc
Confidence 9999999999999999999999999999987643 6899999999998865 999999999999999999999988765
Q ss_pred hHH
Q 000504 1436 SFS 1438 (1458)
Q Consensus 1436 ~F~ 1438 (1458)
.|.
T Consensus 229 ~~~ 231 (356)
T PRK11650 229 TFV 231 (356)
T ss_pred HHH
Confidence 553
No 142
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-40 Score=347.69 Aligned_cols=212 Identities=26% Similarity=0.416 Sum_probs=189.1
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC---HHHHhc
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG---LQDLRS 1283 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~---l~~LR~ 1283 (1458)
.|+++||+.+|+. ...+|+||||+|++||.|+|+|+||||||||+++|.|+++|++|+|.++|.++.... ++++|.
T Consensus 3 ~i~~~nl~k~yp~-~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPG-GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCC-CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 4899999999974 456999999999999999999999999999999999999999999999999999988 677889
Q ss_pred ceEEEccCCCCccc-cHHHhcCc------------CCCCCHH---HHHHHHHHcCcHHHHHhcccccCccccCCCCCCCh
Q 000504 1284 RLSIIPQDPMLFQG-TVRTNLDP------------LEQHSDQ---EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSV 1347 (1458)
Q Consensus 1284 ~i~iIpQdp~LF~g-TIR~NLdp------------~~~~sde---eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1347 (1458)
++|+|.|.|-|-+. |+-+|+.- |+-++.+ ...++|+++|+.+..-.. .++|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qr-----------a~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQR-----------ASTLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHH-----------hccCCc
Confidence 99999999988765 89999731 2344443 478899999998876443 247999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1348 GQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1348 GQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
||+||++|||||.++|+|++-|||||+||+.+.+.|++.|++.. .+.|||+.-|.++..+. ||||+-|++|+|+-.|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999999754 57899999999999876 9999999999999999
Q ss_pred ChhHHh
Q 000504 1425 SPRQLL 1430 (1458)
Q Consensus 1425 ~p~~Ll 1430 (1458)
+++||-
T Consensus 231 ~~~el~ 236 (258)
T COG3638 231 PASELT 236 (258)
T ss_pred Chhhhh
Confidence 999964
No 143
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=378.21 Aligned_cols=214 Identities=32% Similarity=0.492 Sum_probs=185.1
Q ss_pred EEEEeeeEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC--HHHHh
Q 000504 1208 IELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG--LQDLR 1282 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~--l~~LR 1282 (1458)
|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999996432 36999999999999999999999999999999999999999999999999998743 46789
Q ss_pred cceEEEccCC--CCccccHHHhcCcCC---CCCH----HHHHHHHHHcCcH--HHHHhcccccCccccCCCCCCChhHHH
Q 000504 1283 SRLSIIPQDP--MLFQGTVRTNLDPLE---QHSD----QEIWEVINKCHLA--EIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1283 ~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd----eeI~~aL~~~~L~--~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
++++|+||+| .+|..|+++|+.... ..++ +++.++++.++|. +. .|. ....|||||||
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-------~~~----~~~~LSgGq~q 151 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDY-------KDK----SPFELSGGQKR 151 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhh-------ccC----CcccCCHHHHH
Confidence 9999999998 578899999996421 2333 3467778888774 22 222 33579999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhH
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+. .||||++|++|++++.|++++
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998643 689999999999985 499999999999999999999
Q ss_pred Hhhc
Q 000504 1429 LLED 1432 (1458)
Q Consensus 1429 Ll~~ 1432 (1458)
++++
T Consensus 232 ~~~~ 235 (287)
T PRK13637 232 VFKE 235 (287)
T ss_pred HHhC
Confidence 8753
No 144
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=370.61 Aligned_cols=222 Identities=26% Similarity=0.421 Sum_probs=191.4
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CC
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IG 1277 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~ 1277 (1458)
.+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 567999999999964 359999999999999999999999999999999999986 589999999999863 45
Q ss_pred HHHHhcceEEEccCCCCccccHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000504 1278 LQDLRSRLSIIPQDPMLFQGTVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1278 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
...+|++++|+||+|.+|..|+++|+... ...+ +++++++++.+++.+.+.. .......+||+||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKD-------KLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHH-------HHhcCCCCCCHHH
Confidence 66789999999999999999999999642 1222 3457788888887544322 1233456799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
|||++|||||+++|+||||||||++||..+.+.+.+.|++..++.|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999865 99999999999999999999
Q ss_pred HhhcCCC
Q 000504 1429 LLEDNSS 1435 (1458)
Q Consensus 1429 Ll~~~~s 1435 (1458)
+.+.+.-
T Consensus 242 ~~~~~~~ 248 (260)
T PRK10744 242 IFTKPAK 248 (260)
T ss_pred HHhCCCc
Confidence 9865443
No 145
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=384.26 Aligned_cols=217 Identities=25% Similarity=0.437 Sum_probs=191.6
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
..|+++|++++|.. ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+.+ |+++
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 36999999999963 4589999999999999999999999999999999999999999999999999877653 6789
Q ss_pred EEEccCCCCccc-cHHHhcCcC-C--CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPL-E--QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~-~--~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
++|+|++.+|.. |+++|+... . ..+ ++++.++++.+++.++..+.| ..||||||||++|||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----------~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----------DQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 999999732 1 122 346778888888876654333 469999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNS 1434 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~ 1434 (1458)
||+++|+||+||||||+||+.+...+++.|++..+ +.|+|+|||+.+.+.. ||+|++|++|++++.|+|+++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999988654 7899999999999865 99999999999999999999998887
Q ss_pred ChH
Q 000504 1435 SSF 1437 (1458)
Q Consensus 1435 s~F 1437 (1458)
..|
T Consensus 230 ~~~ 232 (351)
T PRK11432 230 SRF 232 (351)
T ss_pred chH
Confidence 655
No 146
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=371.13 Aligned_cols=222 Identities=24% Similarity=0.346 Sum_probs=191.1
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--CCHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--IGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l~ 1279 (1458)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ....
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 5999999999964 3599999999999999999999999999999999999997 48999999999863 3455
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcCC----CC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPLE----QH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~----~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
.+|++++|+||+|.+|..|+++|+.... .. .++.+.++++.+++.+.+ ++.+|+. ..+|||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~----~~~LSgG~~q 157 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNTN----ALSLSGGQQQ 157 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhCC----cccCCHHHHH
Confidence 7889999999999999999999996321 11 234577788888875443 2345554 4579999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||||++|++|++++.|+++++.
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 158 RLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988667899999999999865 9999999999999999999998
Q ss_pred hcCCChH
Q 000504 1431 EDNSSSF 1437 (1458)
Q Consensus 1431 ~~~~s~F 1437 (1458)
+++.-.|
T Consensus 238 ~~~~~~~ 244 (254)
T PRK14273 238 FNPKNTK 244 (254)
T ss_pred hCCCChH
Confidence 7654443
No 147
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=375.24 Aligned_cols=212 Identities=27% Similarity=0.400 Sum_probs=187.4
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999633 45999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEccCC--CCccccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1287 IIPQDP--MLFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1287 iIpQdp--~LF~gTIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
|+||+| .+|..|+++|+.... ..+ ++++.++++.+++.+...+.| ..||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999998 678899999997421 122 345788889999876654443 369999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHHh
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
||+++|++|+|||||++||+.+...+.+.|++.. +++|||++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999999998764 4789999999999985 49999999999999999987653
No 148
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.1e-39 Score=358.50 Aligned_cols=199 Identities=27% Similarity=0.409 Sum_probs=182.7
Q ss_pred EEEEeeeEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcc
Q 000504 1208 IELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~ 1284 (1458)
|+++||+++|++.. +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997642 3699999999999999999999999999999999999999999999999 6
Q ss_pred eEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCC
Q 000504 1285 LSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1364 (1458)
Q Consensus 1285 i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1364 (1458)
++|+||+|.+|++|+++|+......++++.+++++.+++.+++...|.|+++.+.+.+.+||+|||||++||||++++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998765566777889999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHH-HHHHhc-CCcEEEEEecChhhhhhcCEEEEEeCCE
Q 000504 1365 ILVLDEATASIDTATDNVIQQ-TIREET-SRCTVITVAHRIPTVIDNDLVLVLDEGK 1419 (1458)
Q Consensus 1365 ILlLDEaTsslD~~Td~~Iq~-~I~~~~-~~~TVI~IAHrl~ti~~~DrVlvL~~G~ 1419 (1458)
+++|||||++||+++.+.+.+ .+++.. ++.|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999887766 566553 3689999999999998899999999985
No 149
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.4e-40 Score=336.46 Aligned_cols=207 Identities=27% Similarity=0.427 Sum_probs=186.8
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH---Hhcc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---LRSR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR~~ 1284 (1458)
|+|+||+.+|+.+ +++|+||||+|++||.+-++|||||||||++++|++...|+.|+|.++|.|++++.-++ ||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7999999999877 77999999999999999999999999999999999999999999999999999988665 8999
Q ss_pred eEEEccCCCCccc-cHHHhcC-cCC--CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1285 LSIIPQDPMLFQG-TVRTNLD-PLE--QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1285 i~iIpQdp~LF~g-TIR~NLd-p~~--~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
||+|.||--|... |+.||+. |.. ..+ .+++.++|+.+||.+-...+|. .|||||+||+|||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHHH
Confidence 9999999987765 9999986 331 222 3457889999999999988884 5899999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhc-CEEEEEeCCEEEEecCh
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDN-DLVLVLDEGKVLEYDSP 1426 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~~-DrVlvL~~G~ivE~g~p 1426 (1458)
||+..+|++|+-||||-+||+++...|++.+.+.. .+.||++.||+.+.+.++ -|++.+++|+++..+.+
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 99999999999999999999999999999998754 578999999999999875 58999999999987764
No 150
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=375.09 Aligned_cols=215 Identities=25% Similarity=0.424 Sum_probs=191.0
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.++++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999654456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCC--CCccccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1287 IIPQDP--MLFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1287 iIpQdp--~LF~gTIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
|+||+| .++..|+++|+.... ..+ ++++.++++.++|.+++...| ..||+|||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 466789999996421 123 244777888888877665544 369999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
||+.+|+||+|||||++||+.+...+.+.|++..+ ++|||+++|+++.+..||+|++|++|++++.|+++++.+.
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998653 7899999999999988999999999999999999988753
No 151
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-39 Score=366.47 Aligned_cols=212 Identities=24% Similarity=0.404 Sum_probs=182.6
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999964 459999999999999999999999999999999999999999999999999876543 3678999
Q ss_pred EccCCCCcc-ccHHHhcCcCCC---C----C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000504 1288 IPQDPMLFQ-GTVRTNLDPLEQ---H----S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1355 (1458)
Q Consensus 1288 IpQdp~LF~-gTIR~NLdp~~~---~----s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1355 (1458)
+||+|.+|. .|+++|+..... . . ++++.++++..++.+..... ..+||+|||||++|
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~l 147 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----------PAQLSGGQRQRVAL 147 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----------hhhCCHHHHHHHHH
Confidence 999999986 599999974211 1 1 23456777887776544332 24699999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1356 ARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1356 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
||||+++|++|+|||||++||+++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 148 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 9999999999999999999999999999999987643 6899999999998765 999999999999999999999865
Q ss_pred CC
Q 000504 1433 NS 1434 (1458)
Q Consensus 1433 ~~ 1434 (1458)
+.
T Consensus 228 ~~ 229 (239)
T cd03296 228 PA 229 (239)
T ss_pred CC
Confidence 43
No 152
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.7e-39 Score=368.32 Aligned_cols=221 Identities=29% Similarity=0.460 Sum_probs=190.0
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCC-----CcEEEEcCeeCCCC--CHHH
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS-----GGRILIDGVDISMI--GLQD 1280 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~-----~G~I~IDG~dI~~i--~l~~ 1280 (1458)
|+++|++++|+. ..+++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGE--KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECC--eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 789999999964 35999999999999999999999999999999999999998 99999999999763 4566
Q ss_pred HhcceEEEccCCCCccccHHHhcCcC---CC-CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1281 LRSRLSIIPQDPMLFQGTVRTNLDPL---EQ-HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1281 LR~~i~iIpQdp~LF~gTIR~NLdp~---~~-~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
.|++++|+||+|.+|..|+++|+... .. .+ ++++.++++..++.+.+.. .++. ...+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~~----~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKD---RLHD----SALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhh---HhhC----CcccCCHHHHHH
Confidence 78999999999999999999999631 11 12 3456778888888644321 1233 335799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
++|||||+++|++|+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999998865 99999999999999999999987
Q ss_pred cCCChH
Q 000504 1432 DNSSSF 1437 (1458)
Q Consensus 1432 ~~~s~F 1437 (1458)
++...+
T Consensus 233 ~~~~~~ 238 (247)
T TIGR00972 233 NPKEKR 238 (247)
T ss_pred CCCChH
Confidence 655444
No 153
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.1e-39 Score=364.16 Aligned_cols=202 Identities=24% Similarity=0.353 Sum_probs=176.0
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH---HHhcc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DLRSR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR~~ 1284 (1458)
|+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999965434699999999999999999999999999999999999999999999999999876543 47889
Q ss_pred eEEEccCCCCccc-cHHHhcCcC---CC----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1285 LSIIPQDPMLFQG-TVRTNLDPL---EQ----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1285 i~iIpQdp~LF~g-TIR~NLdp~---~~----~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
++|+||+|.+|.. |+++|+... .. ..++++.++++.+++.+.....| .+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 9999999998874 999999632 11 12456788899998876654433 36999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1420 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~i 1420 (1458)
|||+++|+||+|||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999998763 47899999999999875 899999999975
No 154
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=369.65 Aligned_cols=219 Identities=26% Similarity=0.412 Sum_probs=189.0
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CCHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1279 (1458)
.|+++|++++|.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 359999999999999999999999999999999999975 589999999999875 3456
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcC----CC----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPL----EQ----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~----~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
.+|++++|+||+|.+|.+|+++|+... +. ..++++.++++.+++.+.+.. .......+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHHH
Confidence 788999999999999999999999632 11 123567788888888654432 123344679999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++||||++++|+||+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 9999999999999999999998
Q ss_pred hcCC
Q 000504 1431 EDNS 1434 (1458)
Q Consensus 1431 ~~~~ 1434 (1458)
+++.
T Consensus 237 ~~~~ 240 (253)
T PRK14242 237 TRPR 240 (253)
T ss_pred cCCC
Confidence 6544
No 155
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-39 Score=368.72 Aligned_cols=211 Identities=28% Similarity=0.441 Sum_probs=183.0
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC---HHHHhcc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG---LQDLRSR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~---l~~LR~~ 1284 (1458)
++++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 45999999999999999999999999999999999999999999999999998876 4568899
Q ss_pred eEEEccCCCCcc-ccHHHhcCcC------------C---CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000504 1285 LSIIPQDPMLFQ-GTVRTNLDPL------------E---QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1348 (1458)
Q Consensus 1285 i~iIpQdp~LF~-gTIR~NLdp~------------~---~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1348 (1458)
++|+||++.+|. .|+++|+... + ...++++.++++..++.+.. + .....||||
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LS~G 148 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKA-------Y----QRADQLSGG 148 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhh-------C----CCcccCCHH
Confidence 999999998887 5999999531 0 11234566777777775432 2 234579999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecC
Q 000504 1349 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDS 1425 (1458)
Q Consensus 1349 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~ 1425 (1458)
||||++|||||+++|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+. .||+|++|++|++++.|+
T Consensus 149 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 228 (241)
T cd03256 149 QQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGP 228 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999999999999999999864 3789999999999998 499999999999999999
Q ss_pred hhHHh
Q 000504 1426 PRQLL 1430 (1458)
Q Consensus 1426 p~~Ll 1430 (1458)
++++.
T Consensus 229 ~~~~~ 233 (241)
T cd03256 229 PAELT 233 (241)
T ss_pred HHHhh
Confidence 99874
No 156
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.6e-39 Score=367.73 Aligned_cols=212 Identities=26% Similarity=0.436 Sum_probs=181.3
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHH-hcceE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL-RSRLS 1286 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~i~ 1286 (1458)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |.+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999964 359999999999999999999999999999999999999999999999999988876664 67899
Q ss_pred EEccCCCCccc-cHHHhcCcCC----CC-------------CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPLE----QH-------------SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1348 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~~----~~-------------sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1348 (1458)
|+||+|.+|.+ |+++|+.... .. ..+++.++++..++.+. .......||||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG 147 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADL-----------ADRPAGELSYG 147 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccch-----------hhCChhhCCHH
Confidence 99999999987 9999985321 10 11234455555555332 23334579999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000504 1349 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSP 1426 (1458)
Q Consensus 1349 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p 1426 (1458)
||||++||||++++|++|+|||||++||+.+...+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++
T Consensus 148 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 227 (236)
T cd03219 148 QQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTP 227 (236)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCH
Confidence 9999999999999999999999999999999999999998764 57899999999999866 999999999999999999
Q ss_pred hHHhhc
Q 000504 1427 RQLLED 1432 (1458)
Q Consensus 1427 ~~Ll~~ 1432 (1458)
+++.++
T Consensus 228 ~~~~~~ 233 (236)
T cd03219 228 DEVRNN 233 (236)
T ss_pred HHhccC
Confidence 998754
No 157
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-39 Score=366.09 Aligned_cols=214 Identities=28% Similarity=0.452 Sum_probs=185.5
Q ss_pred EEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH---HHh
Q 000504 1208 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DLR 1282 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR 1282 (1458)
|+++|++++|+... .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996431 2699999999999999999999999999999999999999999999999999877654 357
Q ss_pred cceEEEccCCCCcc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1283 SRLSIIPQDPMLFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1283 ~~i~iIpQdp~LF~-gTIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
++++|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+..... ..+||+|||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAY-----------PAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcC-----------hhhCCHHHHHHHH
Confidence 89999999999997 5999998631 1122 34577888888886554332 2469999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
||||++++|++|+|||||++||+.+...+.+.|++.. .++|||+++|+++.+.. ||++++|++|++++.|+++++++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999999864 37899999999999865 99999999999999999999875
Q ss_pred c
Q 000504 1432 D 1432 (1458)
Q Consensus 1432 ~ 1432 (1458)
+
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 4
No 158
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-39 Score=367.61 Aligned_cols=217 Identities=24% Similarity=0.393 Sum_probs=186.2
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
++++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 459999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EccCCCCcc-ccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQ-GTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~-gTIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+|. .|+++|+.... ..+ ++++.++++..++.+. ........+||+|||||++||||+
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~---------~~~~~~~~~LS~G~~qrv~laral 150 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPA---------EFADRYPHELSGGQQQRVGVARAL 150 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcH---------HHHhcChhhCCHHHHHHHHHHHHH
Confidence 999999996 59999996321 122 3356677777776530 011223457999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNS 1434 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~ 1434 (1458)
+++|++|+|||||++||+.+...+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 151 ~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 228 (242)
T cd03295 151 AADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPA 228 (242)
T ss_pred hcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCC
Confidence 99999999999999999999999999999864 37899999999998755 99999999999999999999876544
No 159
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.2e-39 Score=384.22 Aligned_cols=217 Identities=24% Similarity=0.368 Sum_probs=190.6
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|.. ..+|+|+||++++||++||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ |++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999964 4589999999999999999999999999999999999999999999999999887764 67899
Q ss_pred EEccCCCCcc-ccHHHhcCcC-C--CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1287 IIPQDPMLFQ-GTVRTNLDPL-E--QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1287 iIpQdp~LF~-gTIR~NLdp~-~--~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
|+||++.+|. .|+++|+... . ..+ ++++.++++..+|.++..+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP-----------GQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999997 5999999632 1 122 345777888888766554333 4699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSS 1435 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s 1435 (1458)
|+++|++|+||||||+||..+...+++.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPAT 228 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCC
Confidence 9999999999999999999999999999987643 6899999999999865 999999999999999999999988776
Q ss_pred hHH
Q 000504 1436 SFS 1438 (1458)
Q Consensus 1436 ~F~ 1438 (1458)
.|.
T Consensus 229 ~~~ 231 (353)
T TIGR03265 229 PFV 231 (353)
T ss_pred HHH
Confidence 663
No 160
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-39 Score=367.78 Aligned_cols=222 Identities=28% Similarity=0.437 Sum_probs=191.4
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCCCHHHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMIGLQDL 1281 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i~l~~L 1281 (1458)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999964 3599999999999999999999999999999999999974 69999999999998888889
Q ss_pred hcceEEEccCCCCc-cccHHHhcCcCC---CC------CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1282 RSRLSIIPQDPMLF-QGTVRTNLDPLE---QH------SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1282 R~~i~iIpQdp~LF-~gTIR~NLdp~~---~~------sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
|++++|+||+|.+| ..|+++|+.... .. .++++.++++.+++.+.+. ..+|..+ .+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~~----~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLDAPA----GKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhcCCc----ccCCHHHHH
Confidence 99999999999755 579999996321 11 1346788888888865432 2344444 569999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++|||||+++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+. .||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 99999999999999999999999999999999999998767899999999999985 49999999999999999999998
Q ss_pred hcCCChH
Q 000504 1431 EDNSSSF 1437 (1458)
Q Consensus 1431 ~~~~s~F 1437 (1458)
+++...+
T Consensus 234 ~~~~~~~ 240 (250)
T PRK14247 234 TNPRHEL 240 (250)
T ss_pred cCCccHH
Confidence 7654434
No 161
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.7e-39 Score=384.16 Aligned_cols=206 Identities=24% Similarity=0.403 Sum_probs=182.2
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHH----hcceEEEccCCCCccc
Q 000504 1222 PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL----RSRLSIIPQDPMLFQG 1297 (1458)
Q Consensus 1222 ~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L----R~~i~iIpQdp~LF~g 1297 (1458)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.|||.|+...+..++ |++++|+||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999999998887 7899999999999985
Q ss_pred -cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000504 1298 -TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLD 1369 (1458)
Q Consensus 1298 -TIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLD 1369 (1458)
|+++|+... ...+ ++++.++|+.++|.++..+.| .+||||||||++|||||+++|+||+||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----------~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP-----------DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999632 1122 355778888888876655444 469999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHH
Q 000504 1370 EATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFS 1438 (1458)
Q Consensus 1370 EaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~ 1438 (1458)
||||+||+.+.+.+++.+++.. .++|||+|||+++.+.. ||+|++|++|++++.|+|+++++++...|.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 9999999999999999998764 37899999999998755 999999999999999999999987654443
No 162
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.5e-38 Score=366.22 Aligned_cols=219 Identities=26% Similarity=0.356 Sum_probs=194.6
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcc
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSR 1284 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~ 1284 (1458)
.+.|+++|++++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~~----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLVG----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEec----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 4569999999852 3599999999999999999999999999999999999999999999998 4
Q ss_pred eEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCC
Q 000504 1285 LSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1364 (1458)
Q Consensus 1285 i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1364 (1458)
++|+||+|.+|++|+++|+.......+.++.++++.+++.+.+..+|.+.++.+.+.+.+||+|||||++|||||+++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999997643445556778888899999999999999999988899999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHH-HHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHH
Q 000504 1365 ILVLDEATASIDTATDNVIQQT-IREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLV 1441 (1458)
Q Consensus 1365 ILlLDEaTsslD~~Td~~Iq~~-I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l~ 1441 (1458)
||||||||++||+++...+.+. +++..++.|||+|||+++.+..||+|++|++|+++++|+++++.+. .+.|.+.+
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~~ 256 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFSSKL 256 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHHHHH
Confidence 9999999999999999988765 4555567899999999999988999999999999999999999854 34454433
No 163
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-39 Score=369.11 Aligned_cols=223 Identities=23% Similarity=0.450 Sum_probs=190.3
Q ss_pred CCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--
Q 000504 1203 PSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM-- 1275 (1458)
Q Consensus 1203 p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~-- 1275 (1458)
|....|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++..
T Consensus 9 ~~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 9 SKNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CCCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 34457999999999964 359999999999999999999999999999999999987 689999999999863
Q ss_pred CCHHHHhcceEEEccCCCCccccHHHhcCcCC---CC---CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000504 1276 IGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE---QH---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1276 i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~---sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
.+..++|++++|+||+|.+|..|+++|+.... .. .++++.++++.+++.+.+.. .+|. ...+||+||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~~~----~~~~LS~G~ 159 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECKD---KLNE----SGYSLSGGQ 159 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhhh---hhCC----CcccCCHHH
Confidence 56678899999999999999899999997432 11 23456777888877543221 2333 345799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeC-----------
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDE----------- 1417 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~----------- 1417 (1458)
|||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||++||+++.+.+ ||+|++|++
T Consensus 160 ~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~ 239 (269)
T PRK14259 160 QQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKV 239 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEecccccccccccc
Confidence 99999999999999999999999999999999999999987667899999999998865 999999996
Q ss_pred CEEEEecChhHHhhcCC
Q 000504 1418 GKVLEYDSPRQLLEDNS 1434 (1458)
Q Consensus 1418 G~ivE~g~p~~Ll~~~~ 1434 (1458)
|+++|.|+++++++++.
T Consensus 240 g~~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 240 GYLVEFNETKKIFNSPK 256 (269)
T ss_pred ceEEEeCCHHHHHhCcC
Confidence 67999999999987553
No 164
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.9e-39 Score=367.30 Aligned_cols=211 Identities=28% Similarity=0.419 Sum_probs=182.2
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCH---HHHhcc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL---QDLRSR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l---~~LR~~ 1284 (1458)
|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 6899999999622 459999999999999999999999999999999999999999999999999987654 447889
Q ss_pred eEEEccCCCCcc-ccHHHhcCcCC------------C---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000504 1285 LSIIPQDPMLFQ-GTVRTNLDPLE------------Q---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1348 (1458)
Q Consensus 1285 i~iIpQdp~LF~-gTIR~NLdp~~------------~---~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1348 (1458)
++|+||+|.+|. .|+++|+.... . ..++++.++++.+++.+... . ...+||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~LSgG 149 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAY-------Q----RADQLSGG 149 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhc-------C----CcccCCHH
Confidence 999999998886 59999995310 1 11345677788887765432 2 33579999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecC
Q 000504 1349 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDS 1425 (1458)
Q Consensus 1349 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~ 1425 (1458)
||||++|||||+++|++|+|||||++||+++.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|++++.|+
T Consensus 150 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 229 (243)
T TIGR02315 150 QQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGA 229 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCC
Confidence 9999999999999999999999999999999999999998864 37899999999999865 99999999999999999
Q ss_pred hhHHh
Q 000504 1426 PRQLL 1430 (1458)
Q Consensus 1426 p~~Ll 1430 (1458)
++++.
T Consensus 230 ~~~~~ 234 (243)
T TIGR02315 230 PSELD 234 (243)
T ss_pred HHHhC
Confidence 99874
No 165
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-39 Score=368.28 Aligned_cols=219 Identities=30% Similarity=0.416 Sum_probs=187.9
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCC--CCCHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDIS--MIGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~--~i~l~ 1279 (1458)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 3599999999999999999999999999999999999987 4999999999997 45566
Q ss_pred HHhcceEEEccCCCCccc-cHHHhcCcC---CC--CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000504 1280 DLRSRLSIIPQDPMLFQG-TVRTNLDPL---EQ--HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~g-TIR~NLdp~---~~--~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
++|++++|+||+|.+|.+ |+++|+... .. .. ++++.++++..++.+.+.. .++ ....+||+||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKD---RLN----DYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhh---hhc----cChhhCCHHH
Confidence 788999999999999976 999999631 11 11 2456777888777543321 123 3346799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
|||++||||++++|++|||||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667999999999999865 99999999999999999999
Q ss_pred HhhcCC
Q 000504 1429 LLEDNS 1434 (1458)
Q Consensus 1429 Ll~~~~ 1434 (1458)
+++++.
T Consensus 235 ~~~~~~ 240 (253)
T PRK14267 235 VFENPE 240 (253)
T ss_pred HHhCCC
Confidence 986543
No 166
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-39 Score=369.00 Aligned_cols=222 Identities=23% Similarity=0.398 Sum_probs=191.0
Q ss_pred CCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--C
Q 000504 1204 SSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--I 1276 (1458)
Q Consensus 1204 ~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i 1276 (1458)
+.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3568999999999964 3599999999999999999999999999999999999975 89999999999875 3
Q ss_pred CHHHHhcceEEEccCCCCccccHHHhcCcCC---CC--C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCCh
Q 000504 1277 GLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE---QH--S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSV 1347 (1458)
Q Consensus 1277 ~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~--s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1347 (1458)
+...+|++++|+||+|.+|.+|+++|+.... .. + ++++.++++.+++.+.+.. .++ ....+||+
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKD---RLH----EPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhH---Hhh----CCcccCCH
Confidence 4567889999999999999999999996311 11 1 3456788888888654421 122 33457999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000504 1348 GQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSP 1426 (1458)
Q Consensus 1348 GQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p 1426 (1458)
|||||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987667899999999999865 899999999999999999
Q ss_pred hHHhhcCC
Q 000504 1427 RQLLEDNS 1434 (1458)
Q Consensus 1427 ~~Ll~~~~ 1434 (1458)
+++..++.
T Consensus 247 ~~~~~~~~ 254 (267)
T PRK14235 247 EKMFTNPD 254 (267)
T ss_pred HHHHhCCC
Confidence 99986544
No 167
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-39 Score=374.25 Aligned_cols=215 Identities=26% Similarity=0.414 Sum_probs=182.6
Q ss_pred EEEEeeeEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC----CHHH
Q 000504 1208 IELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI----GLQD 1280 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~~ 1280 (1458)
|+++||+++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996432 3699999999999999999999999999999999999999999999999999754 3467
Q ss_pred HhcceEEEccCC--CCccccHHHhcCcCC---CCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1281 LRSRLSIIPQDP--MLFQGTVRTNLDPLE---QHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1281 LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
+|++++|+||+| .+|..|+++|+.... ..+.+ .+.++++.+++.. ........+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~q 152 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSR----------DVMSQSPFQMSGGQMR 152 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHHH
Confidence 899999999998 588899999996421 22332 3445555555531 1122345689999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhH
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
|++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+. .||||++|++|++++.|+|.+
T Consensus 153 rv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~ 232 (286)
T PRK13646 153 KIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKE 232 (286)
T ss_pred HHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999999864 4789999999999985 589999999999999999999
Q ss_pred Hhhc
Q 000504 1429 LLED 1432 (1458)
Q Consensus 1429 Ll~~ 1432 (1458)
++++
T Consensus 233 ~~~~ 236 (286)
T PRK13646 233 LFKD 236 (286)
T ss_pred HHhC
Confidence 8864
No 168
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-39 Score=374.11 Aligned_cols=214 Identities=27% Similarity=0.389 Sum_probs=184.1
Q ss_pred EEEEeeeEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC----CCHHH
Q 000504 1208 IELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM----IGLQD 1280 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~----i~l~~ 1280 (1458)
|+++|++++|+++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997543 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEccCC--CCccccHHHhcCcCC---CCCH----HHHHHHHHHcCcH-HHHHhcccccCccccCCCCCCChhHH
Q 000504 1281 LRSRLSIIPQDP--MLFQGTVRTNLDPLE---QHSD----QEIWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1281 LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd----eeI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
+|++++|++|+| .+|..|+.+|+.... ..+. +++.++++.+++. ++. + ....+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-------~----~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFW-------E----KSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhc-------c----CCcccCCHHHH
Confidence 899999999998 789999999996321 1232 3466777777774 232 2 23357999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhH
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+. .||||++|++|++++.|+|++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998754 4789999999999885 499999999999999999999
Q ss_pred Hhhc
Q 000504 1429 LLED 1432 (1458)
Q Consensus 1429 Ll~~ 1432 (1458)
+.++
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8753
No 169
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-39 Score=369.91 Aligned_cols=215 Identities=27% Similarity=0.471 Sum_probs=187.9
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 48999999999644456999999999999999999999999999999999999999999999999998887788999999
Q ss_pred EEccCC--CCccccHHHhcCcC---CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1287 IIPQDP--MLFQGTVRTNLDPL---EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1287 iIpQdp--~LF~gTIR~NLdp~---~~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
|+||+| .++..|+++|+... ...+++ .+.+++++.++.++.... ..+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lar 155 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKE-----------PQNLSGGQKQRVAIAS 155 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------cccCCHHHHHHHHHHH
Confidence 999998 45677999999642 123333 356677778876654433 2579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
||+++|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+..||+|++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 156 VLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998643 4899999999999888999999999999999999998764
No 170
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-36 Score=337.96 Aligned_cols=471 Identities=21% Similarity=0.256 Sum_probs=342.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccccccChhhHHHHHhhhhhHHhhhhHHHHHH
Q 000504 928 QLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAG 1007 (1458)
Q Consensus 928 ~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ap~~ffd~tp~G~ilnR~s~D~~~id~~l~~~l~~ 1007 (1458)
.++.-|+++.....+...+........+.....+++.++.++++.+|+.-+++-..++++.++++|+..|. .-...+..
T Consensus 49 ~~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~IS-f~~s~lp~ 127 (546)
T COG4615 49 LVLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNIS-FAFSRLPE 127 (546)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhccccccee-ehHhhhHH
Confidence 34444555555555556666777788999999999999999999999999999999999999999999998 33334556
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhhhhHHHHhhcchHH
Q 000504 1008 LAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENR 1087 (1458)
Q Consensus 1008 ~~~~~~~~i~~~~v~~~~~~~~~~v~~p~~~l~~~~~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~G~~tIraf~~e~~ 1087 (1458)
+.++.+-.+++.+.+++.+|+.+.+.+..+++.++.+.+-++.--+-.+...+....+.++++.-+.|.+..+..+...+
T Consensus 128 ~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~ 207 (546)
T COG4615 128 LVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAE 207 (546)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHH
Confidence 88888889999999999999998888877777766655444433333344445567788999999999999988765444
Q ss_pred HHHHHHHHHH------HHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHH---HHHHH
Q 000504 1088 FLLRSHSLID------DYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTLPRSAIDPSLAGLAATYGL---NLNVL 1158 (1458)
Q Consensus 1088 f~~~~~~~~d------~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~y~l---~l~~~ 1158 (1458)
........-+ +..+..........|-.+.+-.+..+++... ....-...+ .+.++.+ .+-..
T Consensus 208 ~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~la----l~~~w~st~-----~a~tivlvlLflr~p 278 (546)
T COG4615 208 YVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLA----LSLGWASTN-----VAATIVLVLLFLRTP 278 (546)
T ss_pred HHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH----Hhhccchhh-----HHHHHHHHHHHHhhH
Confidence 3332211111 1111111122334454433322222221111 111000111 2222332 23455
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEE
Q 000504 1159 QAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKI 1238 (1458)
Q Consensus 1159 ~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Gekv 1238 (1458)
+..++.....+-...++.+||.++...|..+ ......+.|+| ..||++||.|.|.++. .-+..||++|+.||.|
T Consensus 279 L~s~vgilP~l~~AqvA~~kiakle~~~~~a--~~~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelv 352 (546)
T COG4615 279 LLSAVGILPTLLTAQVAFNKIAKLELAPYKA--DFPRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELV 352 (546)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhcCCccc--cCCCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEE
Confidence 5666667777778888999999887633222 12222333445 4699999999998753 4578899999999999
Q ss_pred EEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccccHHHhcCcCCCCCHHHHHHHH
Q 000504 1239 GVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVI 1318 (1458)
Q Consensus 1239 gIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL 1318 (1458)
=|+|.|||||||++++|.|++.|++|+|++||.+++.=++++.|+-++-|.-|-+||+.++ -|-+..+.+.|..-|
T Consensus 353 FliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~L 428 (546)
T COG4615 353 FLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWL 428 (546)
T ss_pred EEECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998654 343447788888778
Q ss_pred HHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHh--cCCcEE
Q 000504 1319 NKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREE--TSRCTV 1396 (1458)
Q Consensus 1319 ~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~--~~~~TV 1396 (1458)
++..+....+-. +|=-++ ..||-|||.|+++--|+|.+.+|+++||=-|.-||.=.+...+.+-.. -.|+||
T Consensus 429 qrLel~~ktsl~-d~~fs~-----~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI 502 (546)
T COG4615 429 QRLELAHKTSLN-DGRFSN-----LKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTI 502 (546)
T ss_pred HHHHHhhhhccc-CCcccc-----cccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeE
Confidence 777665543322 111111 358999999999999999999999999999999999998877665432 258999
Q ss_pred EEEecChhhhhhcCEEEEEeCCEEEEec
Q 000504 1397 ITVAHRIPTVIDNDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1397 I~IAHrl~ti~~~DrVlvL~~G~ivE~g 1424 (1458)
+.|+|+-+....+||++.|++|+++|.-
T Consensus 503 ~aIsHDd~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 503 FAISHDDHYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred EEEecCchhhhhHHHHHHHhcCceeecc
Confidence 9999999999999999999999999863
No 171
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-39 Score=360.05 Aligned_cols=202 Identities=26% Similarity=0.416 Sum_probs=174.8
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEEE
Confidence 578999999964 45999999999999999999999999999999999999999999999999997654 35778999
Q ss_pred EccCCCCcc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~-gTIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+|. .|+++|+... ...+ ++++.++++.+++.+...+.| .+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP-----------HELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHHHHHHH
Confidence 999998886 5999999632 1112 345677888888766543332 46999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
+++|++|+|||||++||+++...+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999864 37899999999998865 9999999999998865
No 172
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-39 Score=363.01 Aligned_cols=208 Identities=24% Similarity=0.362 Sum_probs=180.0
Q ss_pred cEEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH---H
Q 000504 1207 KIELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---L 1281 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---L 1281 (1458)
.++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.++ +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997532 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cceEEEccCCCCccc-cHHHhcCc---CCCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1282 R-SRLSIIPQDPMLFQG-TVRTNLDP---LEQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1282 R-~~i~iIpQdp~LF~g-TIR~NLdp---~~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
| ++++|+||+|.+|.+ |+++|+.. +.... ++++.++++.+++.+...+ ...+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANH-----------RPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHH
Confidence 3 679999999999876 99999863 11222 2456778888877554322 235799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecC
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDS 1425 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~ 1425 (1458)
++||||++++|+||+|||||++||+.+...+.+.|++.. +++|||+|||+++.+..+|++++|++|++++.++
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999998863 4789999999999999999999999999998775
No 173
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.7e-39 Score=380.09 Aligned_cols=216 Identities=25% Similarity=0.419 Sum_probs=188.8
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|.. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 3889999999964 359999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEccCCCCccc-cHHHhcCcC-C------CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPL-E------QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~-~------~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
|+||++.+|.. |+++|+... . ..+ ++++.++++.+++.++..+.| ..||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 99999999985 999999732 1 122 345677888888866544333 469999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
|||||+++|++|+|||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++++
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999988654 6899999999999766 99999999999999999999998
Q ss_pred cCCChH
Q 000504 1432 DNSSSF 1437 (1458)
Q Consensus 1432 ~~~s~F 1437 (1458)
++...|
T Consensus 227 ~p~~~~ 232 (353)
T PRK10851 227 EPATRF 232 (353)
T ss_pred CccchH
Confidence 776554
No 174
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-39 Score=372.17 Aligned_cols=214 Identities=30% Similarity=0.473 Sum_probs=185.9
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCC--CCCHHHHhcc
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDIS--MIGLQDLRSR 1284 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~--~i~l~~LR~~ 1284 (1458)
-|+++|++++|+++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++. ..+..++|++
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 48999999999633 45999999999999999999999999999999999999999999999999984 3446678999
Q ss_pred eEEEccCC--CCccccHHHhcCcC---CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000504 1285 LSIIPQDP--MLFQGTVRTNLDPL---EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1355 (1458)
Q Consensus 1285 i~iIpQdp--~LF~gTIR~NLdp~---~~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1355 (1458)
++|+||+| .+|+.|+++|+... ...+. +.+.++++.+++.++. |. ...+||+|||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-------~~----~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-------DK----PTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-------hC----CcccCCHHHHHHHHH
Confidence 99999998 57889999999642 12232 3466777888876543 22 345799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1356 ARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1356 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
||||+.+|+||||||||++||+.+...+.+.|++..+ ++|||++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999988653 789999999999997 5999999999999999999998863
No 175
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7e-39 Score=362.38 Aligned_cols=211 Identities=27% Similarity=0.391 Sum_probs=181.6
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.+ .+++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~-~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRA-ALARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChh-hhhhEEE
Confidence 689999999963 3599999999999999999999999999999999999999999999999999876654 4458999
Q ss_pred EccCCCC-ccccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPML-FQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~L-F~gTIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+ +..|+++|+.... ..+ ++++.+.++..++.+. ......+||||||||++||||+
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAER-----------ADDKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHHHHHHHH
Confidence 9999987 4679999996431 122 2345566666666432 2233457999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
+++|+||+|||||++||+.+.+.+.+.|++.. .++|+|+++|+++.+..||+|++|++|++++.|+++++.++
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999998864 37899999999999988999999999999999999999864
No 176
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4.4e-39 Score=347.91 Aligned_cols=178 Identities=35% Similarity=0.559 Sum_probs=166.4
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+...+++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999975434699999999999999999999999999999999999999999999999998776 6678899999
Q ss_pred EccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000504 1288 IPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILV 1367 (1458)
Q Consensus 1288 IpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILl 1367 (1458)
+||+|.+|+.|+++|+ ..+||+|||||++||||++++|++|+
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999997 35799999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCEEEEec
Q 000504 1368 LDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1368 LDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g 1424 (1458)
|||||++||+.+.+.+.+.|++..+++|+|+++|+++.+..||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999877789999999999999889999999999998764
No 177
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4e-39 Score=361.13 Aligned_cols=212 Identities=25% Similarity=0.423 Sum_probs=178.3
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHH-hcceE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL-RSRLS 1286 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~i~ 1286 (1458)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999964 359999999999999999999999999999999999999999999999999988877654 67899
Q ss_pred EEccCCCCccc-cHHHhcCcCCC-CCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhc
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPLEQ-HSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLL 1360 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~~~-~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1360 (1458)
|+||+|.+|.+ |+++|+..... +.+ +++.++++..+ .++..++. ....||+|||||++||||++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~------~l~~~~~~----~~~~LS~G~~qrv~laral~ 148 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP------RLKERRKQ----LAGTLSGGEQQMLAIARALM 148 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH------hhhhhhhC----chhhCCHHHHHHHHHHHHHh
Confidence 99999999987 99999964321 111 12223333321 12223333 34579999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1361 KKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1361 r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
++|++|+|||||++||+++...+.+.|++.. .++|+|+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 149 SRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred cCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999998764 47899999999998866 99999999999999999988763
No 178
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-39 Score=370.77 Aligned_cols=217 Identities=24% Similarity=0.406 Sum_probs=186.5
Q ss_pred EEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHH----hcc
Q 000504 1209 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL----RSR 1284 (1458)
Q Consensus 1209 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L----R~~ 1284 (1458)
.++|++.+|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 46688888864 458999999999999999999999999999999999999999999999999988765543 468
Q ss_pred eEEEccCCCCcc-ccHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1285 LSIIPQDPMLFQ-GTVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1285 i~iIpQdp~LF~-gTIR~NLdp~---~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
++|+||+|.+|. .|+++|+... ... .++++.++++.+++.+.....| .+||+|||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 999999999885 5999999631 111 2345778888888877655443 36999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1433 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~ 1433 (1458)
|||+++|+||||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 252 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNP 252 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCc
Confidence 99999999999999999999999999999998864 37899999999998865 9999999999999999999998766
Q ss_pred CChHH
Q 000504 1434 SSSFS 1438 (1458)
Q Consensus 1434 ~s~F~ 1438 (1458)
...|.
T Consensus 253 ~~~~~ 257 (269)
T cd03294 253 ANDYV 257 (269)
T ss_pred CcHHH
Confidence 55443
No 179
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=5.6e-39 Score=358.91 Aligned_cols=205 Identities=25% Similarity=0.406 Sum_probs=178.1
Q ss_pred EEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1208 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
|+++|++++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...++|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999996432 269999999999999999999999999999999999999999999999999976 456788999
Q ss_pred EEEccCCCCccc-cHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~---~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
+|+||+|.+|.+ |+++|+... ... .++++.++++..++.+...+ ...+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDR-----------RVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhh-----------hhhhcCHHHHHHHHHHH
Confidence 999999999986 999998531 112 23456778888888665433 23579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
|++++|++|+|||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998864 47899999999998865 9999999999998764
No 180
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=368.91 Aligned_cols=216 Identities=27% Similarity=0.447 Sum_probs=190.8
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCC---cEEEEcCeeCCCCCHHHHh
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSG---GRILIDGVDISMIGLQDLR 1282 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~---G~I~IDG~dI~~i~l~~LR 1282 (1458)
+.|+++|++++|++...++|+|+||+|++||++||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999996533459999999999999999999999999999999999999987 8999999999887777889
Q ss_pred cceEEEccCC--CCccccHHHhcCcC---CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000504 1283 SRLSIIPQDP--MLFQGTVRTNLDPL---EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1353 (1458)
Q Consensus 1283 ~~i~iIpQdp--~LF~gTIR~NLdp~---~~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1353 (1458)
++++|+||+| .+++.|+++|+... ...++ +++.++++.+++.++....| .+||+|||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHH
Confidence 9999999998 46788999999742 12333 34778888999877654443 47999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhh
Q 000504 1354 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1354 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
+|||||+++|++|||||||++||..+...+.+.|++..+ ++|||++||+++.+..||+|++|++|++++.|+++++++
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999988653 689999999999998899999999999999999999875
Q ss_pred c
Q 000504 1432 D 1432 (1458)
Q Consensus 1432 ~ 1432 (1458)
+
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 3
No 181
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-39 Score=365.19 Aligned_cols=220 Identities=24% Similarity=0.403 Sum_probs=188.1
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcc---CCC--CCcEEEEcCeeCCCC--CHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRV---VEP--SGGRILIDGVDISMI--GLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl---~~p--~~G~I~IDG~dI~~i--~l~ 1279 (1458)
.|+++|++++|++ ..+|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 4899999999964 3599999999999999999999999999999999997 444 589999999998764 346
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcC---CC-----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPL---EQ-----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~-----~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
.+|++++|+||+|.+|.+|+++|+... .. ..+++++++++.+++.+.+.. .....+.+||+||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKD-------KLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhh-------hhhCCcccCCHHHHH
Confidence 788899999999999999999999631 11 123457788888887654422 122345679999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++++
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999987778999999999999865 9999999999999999999998
Q ss_pred hcCCC
Q 000504 1431 EDNSS 1435 (1458)
Q Consensus 1431 ~~~~s 1435 (1458)
+++..
T Consensus 234 ~~~~~ 238 (250)
T PRK14245 234 TNPEK 238 (250)
T ss_pred cCCCC
Confidence 76543
No 182
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=367.36 Aligned_cols=221 Identities=24% Similarity=0.414 Sum_probs=188.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCCCC--HHH
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISMIG--LQD 1280 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~i~--l~~ 1280 (1458)
-+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++. |++|+|.++|.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999963 469999999999999999999999999999999999986 47999999999987643 346
Q ss_pred HhcceEEEccCCCCccccHHHhcCcC---CC------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1281 LRSRLSIIPQDPMLFQGTVRTNLDPL---EQ------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1281 LR~~i~iIpQdp~LF~gTIR~NLdp~---~~------~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
+|++++|+||+|.+|.+|+++|+... .. ..++++.++++..++.+.+. +.+...+.+||+||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~q 156 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQQ 156 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHHH
Confidence 78999999999999999999998632 11 12345677888888765322 1223344679999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++||||++++|+||+|||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987678999999999999875 9999999999999999999998
Q ss_pred hcCCChH
Q 000504 1431 EDNSSSF 1437 (1458)
Q Consensus 1431 ~~~~s~F 1437 (1458)
+++...+
T Consensus 237 ~~~~~~~ 243 (251)
T PRK14244 237 KNPQSSK 243 (251)
T ss_pred cCCCChH
Confidence 7665544
No 183
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-39 Score=347.40 Aligned_cols=219 Identities=27% Similarity=0.403 Sum_probs=185.3
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.+++++|+.+|.. ..||+|+||+|++||.|+|+||||||||||++++.|+..|++|+|.+||.++... ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 4889999999976 5699999999999999999999999999999999999999999999999987443 45799
Q ss_pred EEccCCCCccc-cHHHhcCcCCC-------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPLEQ-------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~~~-------~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
||+|++.||.. ||++|+...-+ ...+.+.+.|+++||.++-...|. .||||||||++||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHHH
Confidence 99999999998 99999863211 123468899999999998877763 589999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhh-hcCEEEEEeC--CEE---EEec--ChhH
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVI-DNDLVLVLDE--GKV---LEYD--SPRQ 1428 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~-~~DrVlvL~~--G~i---vE~g--~p~~ 1428 (1458)
|+.+|+||+||||.++||..|...+|+-+.+.. .++||++|||+++... -+|||+||.+ |+| ++.+ .|.
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~~~~~i~l~rpR- 223 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIGEELEIDLPRPR- 223 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcceeeEEecCCCCCc-
Confidence 999999999999999999999999999887754 3589999999999865 4999999999 444 3333 333
Q ss_pred HhhcCCChHHHHHHHHHh
Q 000504 1429 LLEDNSSSFSKLVAEFLR 1446 (1458)
Q Consensus 1429 Ll~~~~s~F~~l~~~~~~ 1446 (1458)
...+..|..+.++-+.
T Consensus 224 --~~~~~~f~~l~~~i~~ 239 (248)
T COG1116 224 --IRGDPEFLELREELLE 239 (248)
T ss_pred --cccChHHHHHHHHHHH
Confidence 2345668777766554
No 184
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=365.34 Aligned_cols=218 Identities=27% Similarity=0.400 Sum_probs=187.2
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC-------
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG------- 1277 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~------- 1277 (1458)
.+.++++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999964 35999999999999999999999999999999999999999999999999986421
Q ss_pred ------HHHHhcceEEEccCCCCccc-cHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCC
Q 000504 1278 ------LQDLRSRLSIIPQDPMLFQG-TVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDG 1342 (1458)
Q Consensus 1278 ------l~~LR~~i~iIpQdp~LF~g-TIR~NLdp~----~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1342 (1458)
...+|++++|+||+|.+|.+ |+++|+... .... ++++.++++..++.+... ....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQ----------GKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhh----------hCCc
Confidence 34678899999999999975 999999631 1112 345677788877755431 2234
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000504 1343 ENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1420 (1458)
Q Consensus 1343 ~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~i 1420 (1458)
..||+|||||++|||||+++|++|+|||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 5799999999999999999999999999999999999999999998864 47999999999999986 999999999999
Q ss_pred EEecChhHHhhcCC
Q 000504 1421 LEYDSPRQLLEDNS 1434 (1458)
Q Consensus 1421 vE~g~p~~Ll~~~~ 1434 (1458)
++.|+++++++.+.
T Consensus 231 ~~~~~~~~~~~~~~ 244 (257)
T PRK10619 231 EEEGAPEQLFGNPQ 244 (257)
T ss_pred EEeCCHHHhhhCcc
Confidence 99999999886543
No 185
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.2e-38 Score=374.97 Aligned_cols=223 Identities=23% Similarity=0.378 Sum_probs=188.7
Q ss_pred cEEEEeeeEEeCCC-----------CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC
Q 000504 1207 KIELENLLVQYNPT-----------LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM 1275 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~-----------~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~ 1275 (1458)
-++++|++++|+.. ...+++|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 48999999999631 2368999999999999999999999999999999999999999999999999998
Q ss_pred CCHHH---HhcceEEEccCC--CCc-cccHHHhcCc----CC-CCCH----HHHHHHHHHcCcHHHHHhcccccCccccC
Q 000504 1276 IGLQD---LRSRLSIIPQDP--MLF-QGTVRTNLDP----LE-QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAE 1340 (1458)
Q Consensus 1276 i~l~~---LR~~i~iIpQdp--~LF-~gTIR~NLdp----~~-~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e 1340 (1458)
++.++ +|++++||||+| .+| ..||++|+.. +. ..+. +.+.++++.+++.+. .++.
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~------~~~~---- 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPN------LINR---- 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChH------HhcC----
Confidence 87544 678999999999 477 4699999852 11 2333 334567777777321 1222
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeC
Q 000504 1341 DGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDE 1417 (1458)
Q Consensus 1341 ~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~ 1417 (1458)
....||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||+|+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 2356999999999999999999999999999999999999999999987643 7899999999999976 999999999
Q ss_pred CEEEEecChhHHhhcCCChHHH
Q 000504 1418 GKVLEYDSPRQLLEDNSSSFSK 1439 (1458)
Q Consensus 1418 G~ivE~g~p~~Ll~~~~s~F~~ 1439 (1458)
|+++|.|+++++++++...|.+
T Consensus 238 G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHH
Confidence 9999999999999876656655
No 186
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-39 Score=366.43 Aligned_cols=222 Identities=25% Similarity=0.410 Sum_probs=189.2
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCC--CHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMI--GLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1279 (1458)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 12 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 5999999999963 3599999999999999999999999999999999999985 799999999998653 345
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
.+|+.++|+||+|.+|..|+++|+... ...+ ++++.++++.+++.+.+ +..++.+ ...||||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~~~----~~~LSgG~~qr 162 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET---SDRLKSP----ALSLSGGQQQR 162 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch---hhhhcCC----hhhCCHHHHHH
Confidence 678899999999999999999999632 1122 23467788888775432 1223443 35799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+|+++.+
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999987667999999999999866 99999999999999999999987
Q ss_pred cCCChH
Q 000504 1432 DNSSSF 1437 (1458)
Q Consensus 1432 ~~~s~F 1437 (1458)
++...+
T Consensus 243 ~~~~~~ 248 (258)
T PRK14268 243 NPREKS 248 (258)
T ss_pred CCCCHH
Confidence 655443
No 187
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.3e-39 Score=359.83 Aligned_cols=202 Identities=28% Similarity=0.408 Sum_probs=173.8
Q ss_pred EEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH----H
Q 000504 1208 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD----L 1281 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~----L 1281 (1458)
|+++|++++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996531 46999999999999999999999999999999999999999999999999998876433 4
Q ss_pred hcceEEEccCCCCccc-cHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000504 1282 RSRLSIIPQDPMLFQG-TVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1353 (1458)
Q Consensus 1282 R~~i~iIpQdp~LF~g-TIR~NLdp~---~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1353 (1458)
|++++|+||+|.+|.+ |+++|+... ... .++++.++++..++.+.... ...+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNH-----------YPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhc-----------ChhhcCHHHHHHH
Confidence 6789999999999987 999998642 111 13456777777777554332 2347999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEE
Q 000504 1354 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKV 1420 (1458)
Q Consensus 1354 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~~DrVlvL~~G~i 1420 (1458)
+|||||+++|+||+|||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998654 7899999999999888999999999974
No 188
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=374.75 Aligned_cols=225 Identities=25% Similarity=0.405 Sum_probs=190.2
Q ss_pred cEEEEeeeEEeCCC--------CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCH
Q 000504 1207 KIELENLLVQYNPT--------LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL 1278 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~--------~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l 1278 (1458)
-|+++|++++|+.. ...+|+||||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 48999999999631 2369999999999999999999999999999999999999999999999999998875
Q ss_pred H---HHhcceEEEccCCC--Cccc-cHHHhcC-cC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCC
Q 000504 1279 Q---DLRSRLSIIPQDPM--LFQG-TVRTNLD-PL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGEN 1344 (1458)
Q Consensus 1279 ~---~LR~~i~iIpQdp~--LF~g-TIR~NLd-p~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1344 (1458)
. .+|+++++|||||. ++.. |+.+|+. +. .... .+++.++|+++++.+ ..+|... ..
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~~~p----~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYDRYP----HM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhcCCC----cc
Confidence 3 56889999999994 5553 8888874 21 1122 245678888888853 2334433 46
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000504 1345 WSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVL 1421 (1458)
Q Consensus 1345 LSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~iv 1421 (1458)
||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999987643 7899999999999975 9999999999999
Q ss_pred EecChhHHhhcCCChHHHHH
Q 000504 1422 EYDSPRQLLEDNSSSFSKLV 1441 (1458)
Q Consensus 1422 E~g~p~~Ll~~~~s~F~~l~ 1441 (1458)
|.|+++++++++...|.+..
T Consensus 235 e~g~~~~~~~~p~hpyt~~l 254 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQAL 254 (327)
T ss_pred EECCHHHHhcCCCCHHHHHH
Confidence 99999999987766665543
No 189
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=7e-39 Score=380.28 Aligned_cols=218 Identities=22% Similarity=0.405 Sum_probs=191.1
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCC--cEEEEcCeeCCCCCHHHHh
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSG--GRILIDGVDISMIGLQDLR 1282 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~--G~I~IDG~dI~~i~l~~LR 1282 (1458)
.|.|+++|++++|+. ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++ |+|.+||.++...+. .+
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 478999999999964 359999999999999999999999999999999999999999 999999999987665 35
Q ss_pred cceEEEccCCCCccc-cHHHhcCc-C--CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1283 SRLSIIPQDPMLFQG-TVRTNLDP-L--EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1283 ~~i~iIpQdp~LF~g-TIR~NLdp-~--~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
+++++++|++.+|.. |+++|+.. . ...+ ++++.++++.++|.++..+.| .+||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHH
Confidence 789999999999977 99999963 2 1223 234677888888876654444 369999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC---CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS---RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~---~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|||||+++|++|+||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999987543 6899999999999865 9999999999999999999999
Q ss_pred hcCCChH
Q 000504 1431 EDNSSSF 1437 (1458)
Q Consensus 1431 ~~~~s~F 1437 (1458)
+++...|
T Consensus 228 ~~p~~~~ 234 (362)
T TIGR03258 228 DAPADGF 234 (362)
T ss_pred hCcCcHH
Confidence 8876655
No 190
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-39 Score=364.95 Aligned_cols=222 Identities=25% Similarity=0.398 Sum_probs=188.1
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CCHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1279 (1458)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999964 359999999999999999999999999999999999997 479999999999864 3455
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcCC---CC-----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPLE---QH-----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~-----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
.+|+.++|+||+|.+|++|+++|+.... .. .++++.++++.+++++.. +..++. ...+||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~~----~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---KDNLDR----NAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---HHHhcc----ChhhCCHHHHH
Confidence 6788999999999999999999997421 11 123566777777774321 122333 34579999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++||||++++|++|||||||++||+++.+.+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999876 9999999999999999999998
Q ss_pred hcCCChH
Q 000504 1431 EDNSSSF 1437 (1458)
Q Consensus 1431 ~~~~s~F 1437 (1458)
.++.-.|
T Consensus 235 ~~~~~~~ 241 (251)
T PRK14251 235 IAPKKQI 241 (251)
T ss_pred hCCCCHH
Confidence 6554334
No 191
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-39 Score=382.14 Aligned_cols=216 Identities=23% Similarity=0.345 Sum_probs=188.4
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|.. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999964 3599999999999999999999999999999999999999999999999999876653 56899
Q ss_pred EEccCCCCccc-cHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
|+||++.+|.. |+++|+.... ..+ ++++.++++.+++.+...+.| .+||||||||++||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999976 9999996421 122 245778888888866544333 4699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSS 1435 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s 1435 (1458)
|+++|++|+|||||++||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++..
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~ 227 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPAN 227 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 9999999999999999999999999999987643 7899999999998865 999999999999999999999987765
Q ss_pred hH
Q 000504 1436 SF 1437 (1458)
Q Consensus 1436 ~F 1437 (1458)
.|
T Consensus 228 ~~ 229 (369)
T PRK11000 228 RF 229 (369)
T ss_pred HH
Confidence 55
No 192
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=365.63 Aligned_cols=220 Identities=26% Similarity=0.441 Sum_probs=190.2
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CCH
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGL 1278 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l 1278 (1458)
..|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 35999999999953 469999999999999999999999999999999999997 579999999999864 346
Q ss_pred HHHhcceEEEccCCCCccccHHHhcCcC----CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1279 QDLRSRLSIIPQDPMLFQGTVRTNLDPL----EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1279 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
..+|+.++|+||+|.+|.+|+++|+... +.. .++++.++++.+++.+.+.. ........||+|||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~ 169 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKD-------DLHKSALTLSGGQQ 169 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhh-------hhcCCcccCCHHHH
Confidence 6789999999999999999999999642 111 23456778888888655432 22344567999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
||++||||++++|++|+|||||++||+.+...+.+.|++..++.|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 170 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 170 QRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999865 999999999999999999999
Q ss_pred hhcCC
Q 000504 1430 LEDNS 1434 (1458)
Q Consensus 1430 l~~~~ 1434 (1458)
.+.+.
T Consensus 250 ~~~~~ 254 (267)
T PRK14237 250 FTNPK 254 (267)
T ss_pred hcCCC
Confidence 86543
No 193
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.7e-39 Score=357.37 Aligned_cols=208 Identities=26% Similarity=0.410 Sum_probs=181.1
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 578999999964 3599999999999999999999999999999999999999999999999998763 3567889999
Q ss_pred EccCCCCccc-cHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQG-TVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~---~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+|.+ |+++|+... ... .++++.++++..++.+.... ++ ..||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~----~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADR-------LV----KTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-------Ch----hhCCHHHHHHHHHHHHH
Confidence 9999998876 999999531 111 23457788888888765433 33 36999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
+.+|++|+|||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999987643 6899999999999875 999999999999999998764
No 194
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=7.5e-39 Score=374.14 Aligned_cols=213 Identities=25% Similarity=0.400 Sum_probs=185.8
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
..|+++|++++|+. ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|+++
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999964 46999999999999999999999999999999999999999999999999998754 4578999
Q ss_pred EEEccCCCCcc-ccHHHhcCcCC---CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1286 SIIPQDPMLFQ-GTVRTNLDPLE---QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1286 ~iIpQdp~LF~-gTIR~NLdp~~---~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
+|+||+|.+|. .|+++|+..+. ..++ +++.++++.+++.+ ..+++++ +||+|||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~----~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLEN-------KADAKVG----ELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-------HhcCchh----hCCHHHHHHHHHHH
Confidence 99999999886 59999997432 1232 23556677776643 3455553 69999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
||+++|++|+|||||++||+.+...+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+|+++.++
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999864 47899999999999976 999999999999999999999765
No 195
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.3e-38 Score=379.29 Aligned_cols=217 Identities=23% Similarity=0.420 Sum_probs=192.0
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
..++++|++++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++...+.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999964 3589999999999999999999999999999999999999999999999999887654 5789
Q ss_pred EEEccCCCCccc-cHHHhcCcC-C--CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPL-E--QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~-~--~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
+|++|++.+|.. ||++|+... . ..+ ++++.++++.+++.++..+.| ..||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 999999632 1 222 235678888889887766555 369999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNS 1434 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~ 1434 (1458)
||+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+.+.+.. ||+|++|++|++++.|+|+++++++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999988653 7899999999998765 99999999999999999999998876
Q ss_pred ChH
Q 000504 1435 SSF 1437 (1458)
Q Consensus 1435 s~F 1437 (1458)
..|
T Consensus 238 ~~~ 240 (375)
T PRK09452 238 NLF 240 (375)
T ss_pred cHH
Confidence 555
No 196
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=9.4e-39 Score=382.28 Aligned_cols=213 Identities=27% Similarity=0.448 Sum_probs=190.1
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.++++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++.+++..++|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999964 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCC-ccccHHHhcCcCC-----------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1287 IIPQDPML-FQGTVRTNLDPLE-----------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1287 iIpQdp~L-F~gTIR~NLdp~~-----------~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
++||++.+ |+.|+++|+.... ...++.+.++++.+++.++.. ..+ ..||||||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~-------~~~----~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFAD-------RPV----TSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhc-------CCh----hhCCHHHHHHHH
Confidence 99999987 5779999996321 112346888999999876543 333 469999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|||||+++|+||+|||||++||+.+...+.+.|++.. .+.|||+++|+++.+. .||||++|++|++++.|+|++++..
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 9999999999999999999999999999999999864 4789999999999995 4999999999999999999999853
No 197
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=368.05 Aligned_cols=215 Identities=23% Similarity=0.412 Sum_probs=189.2
Q ss_pred cEEEEeeeEEeCCC-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1207 KIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
-|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 24599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCC--CCccccHHHhcCcC---CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1286 SIIPQDP--MLFQGTVRTNLDPL---EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1286 ~iIpQdp--~LF~gTIR~NLdp~---~~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
+|+||+| .++..|+.+|+... ...+++ ++.++++.+++.++.... ...||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTRE-----------PARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 46788999999632 123333 356778888887654332 246999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|||+++|+||||||||++||+.+...+.+.|++..+ ++|||+|||+++.+..||+|++|++|++++.|++++++++
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999987643 7899999999999988999999999999999999998864
No 198
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.2e-39 Score=354.43 Aligned_cols=198 Identities=26% Similarity=0.410 Sum_probs=173.1
Q ss_pred EEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEE
Q 000504 1209 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSII 1288 (1458)
Q Consensus 1209 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iI 1288 (1458)
+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 459999999999999999999999999999999999999999999999998864 4577899999
Q ss_pred ccCC--CCccccHHHhcCcCC---CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCC
Q 000504 1289 PQDP--MLFQGTVRTNLDPLE---QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1363 (1458)
Q Consensus 1289 pQdp--~LF~gTIR~NLdp~~---~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1363 (1458)
||+| .+|..|+++|+.... ...++++.++++.+++.++..+.| ..||+|||||++||||++++|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhCC
Confidence 9998 467889999997432 123457889999999876644333 369999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000504 1364 RILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAHRIPTVID-NDLVLVLDEGKVL 1421 (1458)
Q Consensus 1364 ~ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~iv 1421 (1458)
++|+|||||++||+++.+.+.+.|++. .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 999999999999999999999999886 357899999999999875 9999999999975
No 199
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=368.20 Aligned_cols=213 Identities=25% Similarity=0.427 Sum_probs=187.8
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
++++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++|
T Consensus 4 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 4 IETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred EEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 7899999999643 349999999999999999999999999999999999999999999999999988777889999999
Q ss_pred EccCC--CCccccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1288 IPQDP--MLFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1288 IpQdp--~LF~gTIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
+||+| .+|..|+++|+.... ..+ ++.+.++++.+++.+...+.| ..||+|||||++||||
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lara 151 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAGV 151 (277)
T ss_pred EecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHHH
Confidence 99998 477889999996311 223 235778888888876554433 3699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 152 L~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 152 IAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 9999999999999999999999999999987643 789999999999985 5999999999999999999999853
No 200
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=363.92 Aligned_cols=224 Identities=25% Similarity=0.442 Sum_probs=190.2
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCC--CHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMI--GLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1279 (1458)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999963 4599999999999999999999999999999999999984 899999999998753 345
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcC----CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPL----EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
.+|++++|+||+|.+|..|+++|+... +.. .++++.++++..++.+.+.. .......+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKS-------ELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHH-------HHhCChhhcCHHHHH
Confidence 678899999999999999999999632 111 23346777888887654322 123345679999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++||||++++|+||+|||||++||..+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999987677999999999998765 9999999999999999999998
Q ss_pred hcCCChHHH
Q 000504 1431 EDNSSSFSK 1439 (1458)
Q Consensus 1431 ~~~~s~F~~ 1439 (1458)
+++...|..
T Consensus 234 ~~~~~~~~~ 242 (250)
T PRK14262 234 ERPKNKLTE 242 (250)
T ss_pred hCCCChHHH
Confidence 755444443
No 201
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=371.59 Aligned_cols=215 Identities=24% Similarity=0.336 Sum_probs=183.0
Q ss_pred cEEEEeeeEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC--------
Q 000504 1207 KIELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM-------- 1275 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~-------- 1275 (1458)
.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999996532 259999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CCHHHHhcceEEEccCC--CCccccHHHhcCcCC---CCC----HHHHHHHHHHcCcH-HHHHh
Q 000504 1276 ----------------IGLQDLRSRLSIIPQDP--MLFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLA-EIVRQ 1329 (1458)
Q Consensus 1276 ----------------i~l~~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~s----deeI~~aL~~~~L~-~~i~~ 1329 (1458)
.+...+|++++|+||+| .+|..|+++|+.... ..+ ++++.++++.++|. ++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~- 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ- 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh-
Confidence 13457889999999986 688889999996421 223 23467778888774 3322
Q ss_pred cccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-
Q 000504 1330 DQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI- 1407 (1458)
Q Consensus 1330 lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~- 1407 (1458)
....+||||||||++|||||+.+|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.
T Consensus 161 ----------~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 161 ----------RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred ----------CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHH
Confidence 2235799999999999999999999999999999999999999999998753 4789999999999875
Q ss_pred hcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1408 DNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1408 ~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
.||||++|++|++++.|+|+++.++
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcC
Confidence 4999999999999999999998864
No 202
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.6e-38 Score=363.12 Aligned_cols=217 Identities=23% Similarity=0.411 Sum_probs=186.6
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC----------
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG---------- 1277 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~---------- 1277 (1458)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999964 35999999999999999999999999999999999999999999999999997653
Q ss_pred ---HHHHhcceEEEccCCCCcc-ccHHHhcCcC----CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCC
Q 000504 1278 ---LQDLRSRLSIIPQDPMLFQ-GTVRTNLDPL----EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENW 1345 (1458)
Q Consensus 1278 ---l~~LR~~i~iIpQdp~LF~-gTIR~NLdp~----~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1345 (1458)
...+|++++++||++.+|. .|+++|+... ... .++++.++++..++.+...+. ...|
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~L 147 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHM-----------PAQL 147 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcC-----------hhhc
Confidence 2467889999999999885 6999999631 111 234567788888876654333 3569
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000504 1346 SVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLE 1422 (1458)
Q Consensus 1346 SgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE 1422 (1458)
|+|||||++|||||+++|++|+|||||++||+.+...+.+.|++..+ +.|+|+|||+++.+.+ ||++++|++|++++
T Consensus 148 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 227 (252)
T TIGR03005 148 SGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVE 227 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999987643 7899999999999865 99999999999999
Q ss_pred ecChhHHhhcCCChH
Q 000504 1423 YDSPRQLLEDNSSSF 1437 (1458)
Q Consensus 1423 ~g~p~~Ll~~~~s~F 1437 (1458)
.|+++++.+++...+
T Consensus 228 ~g~~~~~~~~~~~~~ 242 (252)
T TIGR03005 228 QGKPDEIFRQPKEER 242 (252)
T ss_pred eCCHHHHhcCCCcHH
Confidence 999999986654333
No 203
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=366.97 Aligned_cols=213 Identities=27% Similarity=0.431 Sum_probs=185.7
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC-HHHHhcceE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG-LQDLRSRLS 1286 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~-l~~LR~~i~ 1286 (1458)
++++|++++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999643 45999999999999999999999999999999999999999999999999998765 467889999
Q ss_pred EEccCCC--CccccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1287 IIPQDPM--LFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1287 iIpQdp~--LF~gTIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
|+||+|. ++..|+++|+.... ..+ ++++.++++..++.+..... ...||+|||||++|||
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrv~lar 149 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRS-----------PKTLSGGQGQCVALAG 149 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCC-----------cccCCHHHHHHHHHHH
Confidence 9999985 56789999996431 122 34567778888886654332 2469999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
||+++|+||+|||||++||+.+...+.+.|++.. +++|||++||+++.+..||+|++|++|++++.|+++++...
T Consensus 150 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 150 ILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999998754 47899999999999988999999999999999999998754
No 204
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.2e-38 Score=364.84 Aligned_cols=223 Identities=22% Similarity=0.347 Sum_probs=188.7
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH---HHhc
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DLRS 1283 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR~ 1283 (1458)
.|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999876643 3578
Q ss_pred ceEEEccCCCCccc-cHHHhcCcC----CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1284 RLSIIPQDPMLFQG-TVRTNLDPL----EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1284 ~i~iIpQdp~LF~g-TIR~NLdp~----~~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
+++|+||++.+|.+ |+++|+... ...+. +.+.+.++.+++.+.. +..+ .+||||||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~~~----~~LSgGq~qrv~ 153 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAA-------KLMP----SELSGGMARRAA 153 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhh-------hCCh----hhCCHHHHHHHH
Confidence 89999999999987 999999631 11222 3456677777775433 2222 469999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
|||||+++|++|+|||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999988643 6899999999999876 99999999999999999999987
Q ss_pred cCCChHHHHHH
Q 000504 1432 DNSSSFSKLVA 1442 (1458)
Q Consensus 1432 ~~~s~F~~l~~ 1442 (1458)
+++.....++.
T Consensus 234 ~~~~~~~~~~~ 244 (269)
T PRK11831 234 NPDPRVRQFLD 244 (269)
T ss_pred CCcHHHHHHHH
Confidence 55444444443
No 205
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-39 Score=355.73 Aligned_cols=202 Identities=30% Similarity=0.438 Sum_probs=178.3
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+. .++++|+||++++| ++||+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+|++++|
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 579999999964 35999999999999 99999999999999999999999999999999999998776 778999999
Q ss_pred EccCCCCccc-cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQG-TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+|.+ |+++|+... ...+ ++++.++++.+++.+.. |+.+ .+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-------KKKI----GSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-------hCch----hhCCHHHHHHHHHHHHH
Confidence 9999999986 999998631 1122 34577888888887553 3333 46999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
+++|++|+|||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. |||+++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999987667999999999999865 9999999999998865
No 206
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=371.00 Aligned_cols=215 Identities=28% Similarity=0.402 Sum_probs=183.5
Q ss_pred EEEEeeeEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC----CCHHH
Q 000504 1208 IELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM----IGLQD 1280 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~----i~l~~ 1280 (1458)
|+++|++++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996432 359999999999999999999999999999999999999999999999999863 34667
Q ss_pred HhcceEEEccCC--CCccccHHHhcCcC---CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1281 LRSRLSIIPQDP--MLFQGTVRTNLDPL---EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1281 LR~~i~iIpQdp--~LF~gTIR~NLdp~---~~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
.|++++|+||+| .+|+.|+++|+... ...+.+ .+.++++.++|.+.+ .+. ....||+||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~------~~~----~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL------LAR----SPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh------hhC----CcccCCHHHHH
Confidence 888999999998 68888999999632 112332 456677777775221 122 23579999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999988643 7899999999999864 99999999999999999999
Q ss_pred Hhhc
Q 000504 1429 LLED 1432 (1458)
Q Consensus 1429 Ll~~ 1432 (1458)
+.++
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8754
No 207
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=363.63 Aligned_cols=219 Identities=25% Similarity=0.409 Sum_probs=186.7
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC--C---CCcEEEEcCeeCCCC--CHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE--P---SGGRILIDGVDISMI--GLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~--p---~~G~I~IDG~dI~~i--~l~ 1279 (1458)
.++++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ | ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 4899999999964 359999999999999999999999999999999999953 6 499999999998653 345
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcC----CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPL----EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
.+|+.++|+||+|.+|+.|+++|+... +.. .++++.++++.+++.+.+.. .......+||+||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKD-------RLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHH-------HHhcCcccCCHHHHH
Confidence 678899999999999999999998631 111 23456677888887554322 123344579999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++||||++++|++|||||||++||..+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999998865 9999999999999999999998
Q ss_pred hcCC
Q 000504 1431 EDNS 1434 (1458)
Q Consensus 1431 ~~~~ 1434 (1458)
+++.
T Consensus 236 ~~~~ 239 (252)
T PRK14239 236 MNPK 239 (252)
T ss_pred hCCC
Confidence 7654
No 208
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.1e-38 Score=353.89 Aligned_cols=202 Identities=23% Similarity=0.380 Sum_probs=178.4
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++... .++|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999953 4699999999999999999999999999999999999999999999999998764 567889999
Q ss_pred EccCCCCcc-ccHHHhcCcC---CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCC
Q 000504 1288 IPQDPMLFQ-GTVRTNLDPL---EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1363 (1458)
Q Consensus 1288 IpQdp~LF~-gTIR~NLdp~---~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1363 (1458)
+||++.+|. .|+++|+... ...+++++.++++..++.+...+. ...||+|||||++||||++++|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKK-----------VKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 999998884 6999999642 123567788899999987765432 2469999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1364 RILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1364 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
++|+|||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999998754 47899999999999865 9999999999998765
No 209
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=363.42 Aligned_cols=221 Identities=21% Similarity=0.388 Sum_probs=187.9
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC--C---CCcEEEEcCeeCCC--CCHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE--P---SGGRILIDGVDISM--IGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~--p---~~G~I~IDG~dI~~--i~l~ 1279 (1458)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5899999999964 359999999999999999999999999999999999997 3 58999999999864 4456
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcCC----CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPLE----QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~----~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
.+|++++|+||+|.+|.+|+++|+.... ..++ +++.++++..++.+.+.. .++ ....+||+||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~l~----~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKD---RLH----TQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh---hhh----CCcccCCHHHHH
Confidence 7889999999999999999999995321 1122 235566777777554321 123 344579999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++||||++++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+|++++
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999987677899999999999865 9999999999999999999998
Q ss_pred hcCCCh
Q 000504 1431 EDNSSS 1436 (1458)
Q Consensus 1431 ~~~~s~ 1436 (1458)
+++...
T Consensus 243 ~~~~~~ 248 (259)
T PRK14274 243 SNPDDQ 248 (259)
T ss_pred hCCCCH
Confidence 665443
No 210
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=362.50 Aligned_cols=223 Identities=24% Similarity=0.424 Sum_probs=192.4
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CCHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1279 (1458)
.++++||+++|++ .++|+|+||+|++||.+||+|++|||||||+++|+|+.+ |++|+|.+||.+++. .+..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999964 359999999999999999999999999999999999875 389999999999875 3466
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcC-C--CC-C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPL-E--QH-S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~-~--~~-s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
++|++++|+||+|.+|.+|+++|+... . .. + ++++.++++.+++.+.+.. .+|. .+.+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~~~----~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKD---KLDK----SALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHH---HHhC----CcccCCHHHHH
Confidence 789999999999999999999999732 1 11 2 2346778888898776543 2333 34679999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++||||++++|+||+|||||++||..+...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987778999999999999876 8999999999999999999998
Q ss_pred hcCCChHH
Q 000504 1431 EDNSSSFS 1438 (1458)
Q Consensus 1431 ~~~~s~F~ 1438 (1458)
..+.+.+.
T Consensus 234 ~~~~~~~~ 241 (250)
T PRK14266 234 INPKDKRT 241 (250)
T ss_pred hCCCChHH
Confidence 77665553
No 211
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-38 Score=361.86 Aligned_cols=224 Identities=24% Similarity=0.430 Sum_probs=190.4
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC--C---CCcEEEEcCeeCCCC--C
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE--P---SGGRILIDGVDISMI--G 1277 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~--p---~~G~I~IDG~dI~~i--~ 1277 (1458)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 467999999999974 359999999999999999999999999999999999986 4 689999999999753 3
Q ss_pred HHHHhcceEEEccCCCCcc-ccHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000504 1278 LQDLRSRLSIIPQDPMLFQ-GTVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1348 (1458)
Q Consensus 1278 l~~LR~~i~iIpQdp~LF~-gTIR~NLdp~----~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1348 (1458)
...+|++++|+||++.+|. .|+++|+... +..+ ++++.++++.+++.+.+... ++ ....+||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~---~~----~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDR---LK----SNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHH---hh----CCcCcCCHH
Confidence 4578899999999999998 5999999631 1112 24467778888876544321 22 345679999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000504 1349 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPR 1427 (1458)
Q Consensus 1349 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~ 1427 (1458)
||||++||||++++|++|+|||||++||+.+...+.+.|++..++.|||++||+++.+.. ||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988777899999999999865 9999999999999999999
Q ss_pred HHhhcCCChH
Q 000504 1428 QLLEDNSSSF 1437 (1458)
Q Consensus 1428 ~Ll~~~~s~F 1437 (1458)
++..++...+
T Consensus 233 ~~~~~~~~~~ 242 (252)
T PRK14256 233 KIFTTPEKKQ 242 (252)
T ss_pred HHHhCCCcHH
Confidence 9987654433
No 212
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-38 Score=361.82 Aligned_cols=211 Identities=25% Similarity=0.364 Sum_probs=184.0
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHH-hcceE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL-RSRLS 1286 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~i~ 1286 (1458)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |.+++
T Consensus 3 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 3 LYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred EEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 789999999964 359999999999999999999999999999999999999999999999999988776654 56799
Q ss_pred EEccCCCCccc-cHHHhcCcCCC------------C---CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPLEQ------------H---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~~~------------~---sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
|+||+|.+|.+ |+++|+..... . .++++.++++..++.+.. + .....||+|||
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LS~Ge~ 149 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEA-------D----RLAGLLSHGQK 149 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhh-------c----CChhhCCHHHH
Confidence 99999999987 99999964211 0 233466677776664332 2 33357999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
||++||||++++|++|+|||||++||+++...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~ 229 (242)
T TIGR03411 150 QWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQV 229 (242)
T ss_pred HHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHH
Confidence 9999999999999999999999999999999999999987667899999999999975 999999999999999999998
Q ss_pred hh
Q 000504 1430 LE 1431 (1458)
Q Consensus 1430 l~ 1431 (1458)
.+
T Consensus 230 ~~ 231 (242)
T TIGR03411 230 QA 231 (242)
T ss_pred hc
Confidence 74
No 213
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.2e-38 Score=364.20 Aligned_cols=224 Identities=25% Similarity=0.372 Sum_probs=185.6
Q ss_pred EEEEeeeEEeCCC-------CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH
Q 000504 1208 IELENLLVQYNPT-------LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD 1280 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~-------~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~ 1280 (1458)
|+++||+++|+.. ...+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 346999999999999999999999999999999999999999999999999998876543
Q ss_pred ---HhcceEEEccCCC--Cc-cccHHHhcCc-C---CC----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCC
Q 000504 1281 ---LRSRLSIIPQDPM--LF-QGTVRTNLDP-L---EQ----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWS 1346 (1458)
Q Consensus 1281 ---LR~~i~iIpQdp~--LF-~gTIR~NLdp-~---~~----~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1346 (1458)
+|++++|+||+|. ++ ..|+++|+.. . .. ..++++.++++..++.+.. +| ....+||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~------~~----~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSED------AD----KLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh------hh----CChhhCC
Confidence 6788999999983 44 3699999842 1 11 1234566777777764211 22 2345799
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000504 1347 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1423 (1458)
Q Consensus 1347 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~ 1423 (1458)
||||||++|||||+++|+||+|||||++||+++...+.+.|++..+ +.|||+|+|+++.+.. ||++++|++|++++.
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 232 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEE 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEE
Confidence 9999999999999999999999999999999999999999987643 7899999999999975 999999999999999
Q ss_pred cChhHHhhcCCChHHHHH
Q 000504 1424 DSPRQLLEDNSSSFSKLV 1441 (1458)
Q Consensus 1424 g~p~~Ll~~~~s~F~~l~ 1441 (1458)
|+++++++.++....++.
T Consensus 233 g~~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 233 CDVAQLLSFKHPAGRNLQ 250 (265)
T ss_pred CCHHHHcCCCCHHHHHHH
Confidence 999999864333333343
No 214
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-38 Score=361.59 Aligned_cols=222 Identities=26% Similarity=0.413 Sum_probs=188.9
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--CCH
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--IGL 1278 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l 1278 (1458)
|.|+++||+++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 57999999999964 3599999999999999999999999999999999999863 69999999999875 455
Q ss_pred HHHhcceEEEccCCCCccccHHHhcCcCC---CC-----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1279 QDLRSRLSIIPQDPMLFQGTVRTNLDPLE---QH-----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1279 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~-----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
..+|++++|+||+|.+|..|+++|+.... .. .++++.++++.+++.+.+.. .++ ....+||+|||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~~----~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKD---RLK----KSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHH---HHh----cCCCCCCHHHH
Confidence 67899999999999999999999996321 11 23456677777777544321 123 33457999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667899999999998865 999999999999999999999
Q ss_pred hhcCCCh
Q 000504 1430 LEDNSSS 1436 (1458)
Q Consensus 1430 l~~~~s~ 1436 (1458)
..++...
T Consensus 233 ~~~~~~~ 239 (250)
T PRK14240 233 FTNPKDK 239 (250)
T ss_pred HhCCCCh
Confidence 8654433
No 215
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-38 Score=360.77 Aligned_cols=219 Identities=26% Similarity=0.425 Sum_probs=188.2
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCC-----CcEEEEcCeeCCCC--CHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS-----GGRILIDGVDISMI--GLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~-----~G~I~IDG~dI~~i--~l~ 1279 (1458)
.|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 5899999999964 45999999999999999999999999999999999999987 69999999998653 456
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcCC---C-CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPLE---Q-HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
.+|++++|+||+|.+|..|+++|+.... . .. ++.+.++++..++.+.+.. .....+.+||+||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKD-------NLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhh-------HhhCCcccCCHHHHH
Confidence 7899999999999999999999996421 1 11 2345566777777654432 233455689999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999877 7999999999999999999997
Q ss_pred hcCC
Q 000504 1431 EDNS 1434 (1458)
Q Consensus 1431 ~~~~ 1434 (1458)
.++.
T Consensus 235 ~~~~ 238 (251)
T PRK14249 235 SRPR 238 (251)
T ss_pred hCCC
Confidence 6544
No 216
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1e-38 Score=323.83 Aligned_cols=210 Identities=28% Similarity=0.427 Sum_probs=185.7
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|.+++|.++|.. .| =..+++|++||+|||+|+||||||||++++.|+..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LP---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ce---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 567899999964 33 357899999999999999999999999999999999999999999999876654 467999
Q ss_pred EccCCCCccc-cHHHhcCcC----C---CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQG-TVRTNLDPL----E---QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~----~---~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+.||.-||.. ||++|+... - ....+.+..++.++|+.++..++|+ .||||||||++|||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHH
Confidence 9999999987 999998642 2 2334568999999999999999985 5899999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNS 1434 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~ 1434 (1458)
+|+.+||+||||.|+||+.-.+.+...+.+.. ++.|+++|||.++.+.. +||++++++|||++.|+.+++++.++
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~ 222 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKA 222 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCC
Confidence 99999999999999999999999888877644 56899999999999865 99999999999999999999997654
No 217
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=363.48 Aligned_cols=221 Identities=24% Similarity=0.389 Sum_probs=189.2
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--CCH
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--IGL 1278 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l 1278 (1458)
+.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. ...
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999964 3599999999999999999999999999999999999985 48999999999864 445
Q ss_pred HHHhcceEEEccCCCCccccHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1279 QDLRSRLSIIPQDPMLFQGTVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1279 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
..+|.+++|+||+|.+|..|+++|+... .... ++.+.++++.+++.+.+.. .++. ....||+|||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~~~----~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD---KLNK----SALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh---HhcC----CcccCCHHHH
Confidence 6788999999999999999999999632 1112 2345678888888655432 2333 3457999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEe-----CCEEEEec
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLD-----EGKVLEYD 1424 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~-----~G~ivE~g 1424 (1458)
||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999987677899999999999876 99999998 59999999
Q ss_pred ChhHHhhcCCC
Q 000504 1425 SPRQLLEDNSS 1435 (1458)
Q Consensus 1425 ~p~~Ll~~~~s 1435 (1458)
+++++++++..
T Consensus 237 ~~~~~~~~~~~ 247 (259)
T PRK14260 237 VTTQIFSNPLD 247 (259)
T ss_pred CHHHHhcCCCC
Confidence 99999866543
No 218
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-38 Score=367.17 Aligned_cols=215 Identities=25% Similarity=0.419 Sum_probs=188.6
Q ss_pred cEEEEeeeEEeCCC----CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC-HHHH
Q 000504 1207 KIELENLLVQYNPT----LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG-LQDL 1281 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~----~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~-l~~L 1281 (1458)
-++++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 48999999999642 246999999999999999999999999999999999999999999999999997654 4568
Q ss_pred hcceEEEccCCC--CccccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1282 RSRLSIIPQDPM--LFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1282 R~~i~iIpQdp~--LF~gTIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
|++++|+||+|. +|..|+++|+.... ..+ ++++.++++.+++.++..+.| ..||+|||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 67678999996421 122 356788899999877655443 4699999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHh
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
++|||||+++|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+..||+|++|++|++++.|+|+++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999764 378999999999999889999999999999999999997
Q ss_pred hc
Q 000504 1431 ED 1432 (1458)
Q Consensus 1431 ~~ 1432 (1458)
.+
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 54
No 219
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=366.58 Aligned_cols=215 Identities=24% Similarity=0.418 Sum_probs=187.0
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|+...+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 48999999999754446999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEccCCC--CccccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1287 IIPQDPM--LFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1287 iIpQdp~--LF~gTIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
|+||+|. ++..|+++|+.... ... ++++.++++..++.+... . ...+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERAD-------Y----EPNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhh-------C----CcccCCHHHHHHHHHHH
Confidence 9999994 44558999985321 112 345667778777755432 2 23579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998643 6899999999999988999999999999999999998764
No 220
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.9e-38 Score=355.30 Aligned_cols=203 Identities=27% Similarity=0.424 Sum_probs=174.3
Q ss_pred EEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH---Hh
Q 000504 1208 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---LR 1282 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR 1282 (1458)
|+++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996422 35999999999999999999999999999999999999999999999999998877654 34
Q ss_pred -cceEEEccCCCCcc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000504 1283 -SRLSIIPQDPMLFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1353 (1458)
Q Consensus 1283 -~~i~iIpQdp~LF~-gTIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1353 (1458)
++++|+||+|.+|. .|+++|+... .... ++++.++++..++.+..... ...||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHR-----------PSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHH
Confidence 68999999999986 5999999641 1222 23466777777775543322 246999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEEE
Q 000504 1354 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKVL 1421 (1458)
Q Consensus 1354 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~~DrVlvL~~G~iv 1421 (1458)
+||||++++|+||+|||||++||+++...+.+.|++.. .++|||+|||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999998764 368999999999999889999999999986
No 221
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.6e-38 Score=362.81 Aligned_cols=221 Identities=25% Similarity=0.354 Sum_probs=195.9
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.|+++|++++|+.. ..+.|++ ||+|++||+++|+|+||||||||+++|.|+++ .+|++ .++|
T Consensus 2 ~i~~~nls~~~~~~------~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I-~i~g~~i~~~~~~ 73 (275)
T cd03289 2 QMTVKDLTAKYTEG------GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDI-QIDGVSWNSVPLQ 73 (275)
T ss_pred eEEEEEEEEEeCCC------CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEE-EECCEEhhhCCHH
Confidence 48899999999743 2468999 99999999999999999999999999999998 78986 7777
Q ss_pred ----EEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHH
Q 000504 660 ----KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1458)
Q Consensus 660 ----~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 735 (1458)
.++|+||+|+++++|++||+....++..++..++++.++|...+..+|++.++.+++.|.+||||||||++||||+
T Consensus 74 ~lr~~i~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRal 153 (275)
T cd03289 74 KWRKAFGVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSV 153 (275)
T ss_pred HHhhhEEEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHH
Confidence 3799999999999999999964444667778889999999988999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhhhcchHHH
Q 000504 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSELV 815 (1458)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 815 (1458)
+.+|+|+||||||++||+.+.+.+.+ .+.....++|+|+|||+++++..||+|++|++|++++.|+++++.+ ....+.
T Consensus 154 l~~p~illlDEpts~LD~~~~~~l~~-~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~-~~~~~~ 231 (275)
T cd03289 154 LSKAKILLLDEPSAHLDPITYQVIRK-TLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLN-EKSHFK 231 (275)
T ss_pred hcCCCEEEEECccccCCHHHHHHHHH-HHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhh-CcHHHH
Confidence 99999999999999999998776654 5555556899999999999988899999999999999999999988 555666
Q ss_pred HHHHH
Q 000504 816 RQMKA 820 (1458)
Q Consensus 816 ~~~~~ 820 (1458)
+++..
T Consensus 232 ~~~~~ 236 (275)
T cd03289 232 QAISP 236 (275)
T ss_pred HHHhh
Confidence 66543
No 222
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.3e-38 Score=353.90 Aligned_cols=210 Identities=22% Similarity=0.345 Sum_probs=187.1
Q ss_pred EEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCH----HHHhcc
Q 000504 1209 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL----QDLRSR 1284 (1458)
Q Consensus 1209 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l----~~LR~~ 1284 (1458)
.+.|+.++|+++ .++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 577999999765 469999999999999999999999999999999999999999999999998876542 345778
Q ss_pred eEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCC
Q 000504 1285 LSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1364 (1458)
Q Consensus 1285 i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1364 (1458)
++|+||+|.+|+.|+++|+.....+.+++..++++.+++.+.+..+|.|+++.......+||+|||||++||||++++|+
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 160 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTN 160 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999998654456777788999999999998899999998888889999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHH--HHHHhc-CCcEEEEEecChhhhhhcCEEEEEeCCE
Q 000504 1365 ILVLDEATASIDTATDNVIQQ--TIREET-SRCTVITVAHRIPTVIDNDLVLVLDEGK 1419 (1458)
Q Consensus 1365 ILlLDEaTsslD~~Td~~Iq~--~I~~~~-~~~TVI~IAHrl~ti~~~DrVlvL~~G~ 1419 (1458)
+|+|||||++||..+...+.+ .++... .+.|+|++||+.+.+..||++++|++|.
T Consensus 161 illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 161 IVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999888776 444432 3689999999999998899999999884
No 223
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-38 Score=360.09 Aligned_cols=213 Identities=24% Similarity=0.345 Sum_probs=181.8
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCC------CCCHHHH
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDIS------MIGLQDL 1281 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~------~i~l~~L 1281 (1458)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ......+
T Consensus 3 l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 3 IQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 789999999964 35999999999999999999999999999999999999999999999999874 1234567
Q ss_pred hcceEEEccCCCCccc-cHHHhcCc--C--CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1282 RSRLSIIPQDPMLFQG-TVRTNLDP--L--EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1282 R~~i~iIpQdp~LF~g-TIR~NLdp--~--~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
|++++|+||+|.+|.+ |+++|+.. . .... .+++.+.++..++.++.... ..+||||||||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qr 149 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRF-----------PLHLSGGQQQR 149 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHH
Confidence 8899999999999976 99999952 1 1122 23456667777765544332 24799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
++||||++++|+||+|||||++||+++...+.+.|++.. +++|+|+++|+++.+.. ||++++|++|++++.|+++++.
T Consensus 150 v~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 229 (242)
T PRK11124 150 VAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFT 229 (242)
T ss_pred HHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhc
Confidence 999999999999999999999999999999999998764 37899999999999865 9999999999999999999876
Q ss_pred hcC
Q 000504 1431 EDN 1433 (1458)
Q Consensus 1431 ~~~ 1433 (1458)
+.+
T Consensus 230 ~~~ 232 (242)
T PRK11124 230 QPQ 232 (242)
T ss_pred Ccc
Confidence 433
No 224
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-38 Score=364.00 Aligned_cols=219 Identities=26% Similarity=0.448 Sum_probs=186.6
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CCHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1279 (1458)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5999999999964 459999999999999999999999999999999999865 789999999999865 3445
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcC----CC----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPL----EQ----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~----~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
.+|++++|+||+|.+|.+|+++|+... .. ..++.+.++++.+++.+.+.. -++ ....+|||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKD---RLH----SSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHH---HHh----cCcccCCHHHHH
Confidence 678899999999999999999998632 11 113446777777777532211 122 334679999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999998865 9999999999999999999998
Q ss_pred hcCC
Q 000504 1431 EDNS 1434 (1458)
Q Consensus 1431 ~~~~ 1434 (1458)
.++.
T Consensus 252 ~~~~ 255 (268)
T PRK14248 252 TSPK 255 (268)
T ss_pred hCCC
Confidence 6544
No 225
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.1e-38 Score=359.48 Aligned_cols=213 Identities=25% Similarity=0.401 Sum_probs=183.0
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC--HHHHhcce
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG--LQDLRSRL 1285 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~--l~~LR~~i 1285 (1458)
++++|++++|++ +++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999963 45999999999999999999999999999999999999999999999999998643 45678899
Q ss_pred EEEccCCCCcc-ccHHHhcCcCC----CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1286 SIIPQDPMLFQ-GTVRTNLDPLE----QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1286 ~iIpQdp~LF~-gTIR~NLdp~~----~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
+|+||++.+|. .|+++|+.... ..+ ++++.++++..++.+.... ....||+|||||++||
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~la 148 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHH-----------YPSELSGGQQQRVAIA 148 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhc-----------ChhhcCHHHHHHHHHH
Confidence 99999998886 59999996321 112 2345667777766544332 2357999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1433 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~ 1433 (1458)
||++++|++|+|||||++||.++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++.++++++
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 149 RALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 99999999999999999999999999999998764 47899999999999865 9999999999999999999987654
No 226
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-39 Score=368.79 Aligned_cols=218 Identities=23% Similarity=0.393 Sum_probs=196.0
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
..|+++||+.+|. ...+++|+|++|++||.+.++|||||||||++++|.|+..|++|+|.+||.||..++++ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999998 35699999999999999999999999999999999999999999999999999998877 5789
Q ss_pred EEEccCCCCccc-cHHHhcCcC-C---CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPL-E---QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~-~---~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
++|+|+..||+. ||++|+.+. . ...+ +.+.++|+.++|.++-.+.|. .|||||+||++||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPH-----------QLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChh-----------hhChHHHHHHHHH
Confidence 999999999987 999998642 2 1233 367899999999998877763 5899999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHHhhcC
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQLLEDN 1433 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~Ll~~~ 1433 (1458)
|||..+|++|+||||-|+||..-...+|.-+++.. .+.|.|.|||+-+... -+|||.||++|+|...|+|+|+..++
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999998887643 3789999999988765 59999999999999999999999999
Q ss_pred CChHH
Q 000504 1434 SSSFS 1438 (1458)
Q Consensus 1434 ~s~F~ 1438 (1458)
.+.|-
T Consensus 229 ~~~fV 233 (352)
T COG3842 229 ATRFV 233 (352)
T ss_pred chHHH
Confidence 88773
No 227
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.5e-38 Score=358.96 Aligned_cols=211 Identities=27% Similarity=0.480 Sum_probs=180.6
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH-HhcceE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRLS 1286 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i~ 1286 (1458)
|+++|++++|+. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999964 35999999999999999999999999999999999999999999999999998877665 457899
Q ss_pred EEccCCCCccc-cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
|+||+|.+|.+ |+++|+... .... ++++.+.++..++.+.. .....+||+|||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~a 147 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLR-----------KSKASSLSGGERRRVEIARA 147 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHHHHHHHH
Confidence 99999999987 999999632 1122 22345566666554332 23345799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
++++|++|+|||||++||.++.+.+.+.|++.. .++|||+++|+++.+.. ||+|++|++|++++.|+++++..
T Consensus 148 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 148 LATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999999998764 47899999999987765 99999999999999999998864
No 228
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1e-38 Score=355.01 Aligned_cols=200 Identities=31% Similarity=0.463 Sum_probs=173.1
Q ss_pred EEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEE
Q 000504 1209 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSII 1288 (1458)
Q Consensus 1209 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iI 1288 (1458)
+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 46899999975334699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred ccCC--CCccccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1289 PQDP--MLFQGTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1289 pQdp--~LF~gTIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
||+| .++..|+++|+... ...+ ++++.+.++..++.+...+. ...||||||||++|||||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRS-----------PFTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCC-----------cccCCHHHHHHHHHHHHH
Confidence 9998 36788999999642 1122 23456677777776544322 257999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCE
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGK 1419 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ 1419 (1458)
+++|++|+|||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999999998764 37899999999999987 99999999985
No 229
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-39 Score=346.55 Aligned_cols=186 Identities=32% Similarity=0.422 Sum_probs=157.5
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------E
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------K 660 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------~ 660 (1458)
.+++++++.+|.. ...|+| ||+|++||+++|+||+||||||||++|+|+.+|++|++ .++| .
T Consensus 3 ~l~i~~v~~~f~~--------~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V-~~~g~~v~~p~~~ 73 (248)
T COG1116 3 LLEIEGVSKSFGG--------VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEV-LLDGRPVTGPGPD 73 (248)
T ss_pred eEEEEeeEEEeCc--------eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCcccCCCCCC
Confidence 4788899888864 478999 99999999999999999999999999999999999997 7877 4
Q ss_pred EEEEcCCCCCCC-CcHHHHHhcCCCCC-------HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHH
Q 000504 661 KAYVPQSSWIQT-GTIRENILFGKDMR-------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLA 732 (1458)
Q Consensus 661 ~ayv~Q~~~i~~-~Ti~enI~fg~~~~-------~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 732 (1458)
++||+|++-++. .||+|||.||.+.. +++-++.++..+|...- +....+|||||||||+||
T Consensus 74 ~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~-----------~~~P~qLSGGMrQRVaiA 142 (248)
T COG1116 74 IGYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFE-----------DKYPHQLSGGMRQRVAIA 142 (248)
T ss_pred EEEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchh-----------hcCccccChHHHHHHHHH
Confidence 699999988765 59999999997652 23445555555554332 345679999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhC-CcEEEEEecccchhc-cCCEEEEEeCC
Q 000504 733 RAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLS-QKTVLYTTHQLEFLD-AADLVLVMKDG 795 (1458)
Q Consensus 733 RAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G 795 (1458)
||+..+|+++||||||+|||+.|+.++-+.+.+-+.+ ++||++||||+++.- -+|||++|.++
T Consensus 143 RAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 143 RALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred HHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999998887776655543 799999999999865 49999999983
No 230
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-38 Score=364.80 Aligned_cols=212 Identities=27% Similarity=0.405 Sum_probs=187.2
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999963 35999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEccCCCCccc-cHHHhcCcCC-----------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPLE-----------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~~-----------~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
|+||++.++.+ |+++|+.... ...++++.++++.+++.+..... + .+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~----~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRL-------V----DSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-------c----ccCCHHHHHHHH
Confidence 99999877665 9999996321 11244678889999887654333 2 369999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
||||++.+|+||||||||++||..+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 9999999999999999999999999999999998764 37899999999999865 99999999999999999999874
No 231
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-38 Score=364.54 Aligned_cols=220 Identities=24% Similarity=0.440 Sum_probs=188.6
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CCH
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGL 1278 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l 1278 (1458)
..|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 38 ~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 35899999999964 359999999999999999999999999999999999997 689999999999865 345
Q ss_pred HHHhcceEEEccCCCCccccHHHhcCcC---CC---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1279 QDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQ---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1279 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~---~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
..+|++++|+||+|.+|.+|+++|+... .. ..+++++++++..++.+.+.. .++ ....+||||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~---~~~----~~~~~LSgGe~qr 188 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD---QLD----SSGLDLSGGQQQR 188 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH---HHh----CCcccCCHHHHHH
Confidence 6788999999999999999999999632 11 124567888888887544322 123 3345799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEE-EEeCCEEEEecChhHHh
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVL-VLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVl-vL~~G~ivE~g~p~~Ll 1430 (1458)
++|||||+++|+||||||||++||..+.+.+.+.|++..+++|||+++|+++.+.. |||++ +|++|++++.|++++++
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999988767899999999999876 99975 57999999999999998
Q ss_pred hcCC
Q 000504 1431 EDNS 1434 (1458)
Q Consensus 1431 ~~~~ 1434 (1458)
+++.
T Consensus 269 ~~~~ 272 (285)
T PRK14254 269 ENPE 272 (285)
T ss_pred hCcC
Confidence 6544
No 232
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-38 Score=363.53 Aligned_cols=221 Identities=25% Similarity=0.408 Sum_probs=190.5
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--CC
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--IG 1277 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~ 1277 (1458)
.+.|+++|++++|.. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 23 ~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 23 QTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred CcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 456999999999964 3599999999999999999999999999999999999884 89999999999875 34
Q ss_pred HHHHhcceEEEccCCCCccccHHHhcCcC---CC-CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000504 1278 LQDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQ-HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1278 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~-~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
...+|++++|+||++.+|.+|+++|+... .. .. ++++.++++.+++.+.+.. .....+.+||+||
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 173 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKD-------RLHENAFGLSGGQ 173 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHH-------HhhCCcccCCHHH
Confidence 56789999999999999999999999632 11 11 2447778888887654432 2234456799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
|||++||||++++|+||+|||||++||+.+...+.+.|++..++.|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 174 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 253 (272)
T PRK14236 174 QQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDT 253 (272)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHH
Confidence 99999999999999999999999999999999999999987677899999999999865 99999999999999999999
Q ss_pred HhhcCC
Q 000504 1429 LLEDNS 1434 (1458)
Q Consensus 1429 Ll~~~~ 1434 (1458)
+.+++.
T Consensus 254 ~~~~~~ 259 (272)
T PRK14236 254 LFTSPA 259 (272)
T ss_pred HhcCCC
Confidence 986543
No 233
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-38 Score=362.03 Aligned_cols=222 Identities=23% Similarity=0.383 Sum_probs=187.4
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CC
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IG 1277 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~ 1277 (1458)
...++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 22 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred ceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 336999999999964 359999999999999999999999999999999999987 699999999999853 45
Q ss_pred HHHHhcceEEEccCCCCccccHHHhcCcC---CCCCH-----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000504 1278 LQDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQHSD-----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1278 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~sd-----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
...+|++++|+||+|.+|..|+++|+... .+.++ +.+.++++..++.+.+. ......+.+||+||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~-------~~~~~~~~~LSgGe 172 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELK-------DRLHDNAYGLSGGQ 172 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHH-------HHHhcCcccCCHHH
Confidence 56788999999999999999999999631 12222 23455566655433221 22234456799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
|||++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|++.+
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~ 252 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDK 252 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987778999999999999865 99999999999999999999
Q ss_pred HhhcCCC
Q 000504 1429 LLEDNSS 1435 (1458)
Q Consensus 1429 Ll~~~~s 1435 (1458)
+.+++..
T Consensus 253 ~~~~~~~ 259 (271)
T PRK14238 253 IFSNPSD 259 (271)
T ss_pred HHcCCCC
Confidence 9866543
No 234
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.4e-38 Score=354.73 Aligned_cols=201 Identities=26% Similarity=0.368 Sum_probs=174.5
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCH---HHHhcc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL---QDLRSR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l---~~LR~~ 1284 (1458)
|+++|++++|+.+ +.+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 5789999999643 459999999999999999999999999999999999999999999999999987754 357889
Q ss_pred eEEEccCCCCccc-cHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1285 LSIIPQDPMLFQG-TVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1285 i~iIpQdp~LF~g-TIR~NLdp~---~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
++++||+|.+|.+ |+++|+... ... .++++.++++.+++.+.....| .+||+|||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----------AELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhcCHHHHHHHHHH
Confidence 9999999999985 999999632 112 2345778888888866543332 36999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1420 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~i 1420 (1458)
||++++|+||+|||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999863 47899999999999976 899999999974
No 235
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.5e-38 Score=359.97 Aligned_cols=215 Identities=26% Similarity=0.426 Sum_probs=183.0
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC--------H
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG--------L 1278 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~--------l 1278 (1458)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999964 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhcceEEEccCCCCcc-ccHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000504 1279 QDLRSRLSIIPQDPMLFQ-GTVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1279 ~~LR~~i~iIpQdp~LF~-gTIR~NLdp~----~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
..+|++++|+||+|.+|. .|+++|+... .... ++.+.++++..++.+. ......+||+||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGK-----------ETSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcch-----------hhCChhhCChHH
Confidence 467889999999999886 5999999631 1222 2335566666665432 223346799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPR 1427 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~ 1427 (1458)
|||++|||||+++|++|||||||++||+.+...+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998764 37899999999999866 9999999999999999999
Q ss_pred HHhhcCC
Q 000504 1428 QLLEDNS 1434 (1458)
Q Consensus 1428 ~Ll~~~~ 1434 (1458)
++.+.+.
T Consensus 230 ~~~~~~~ 236 (250)
T PRK11264 230 ALFADPQ 236 (250)
T ss_pred HHhcCCC
Confidence 9876543
No 236
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.4e-38 Score=354.35 Aligned_cols=202 Identities=22% Similarity=0.398 Sum_probs=174.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. |++++|
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999964 3599999999999999999999999999999999999999999999999999765543 568999
Q ss_pred EccCCCCcc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~-gTIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||++.+|. .|+++|+... .... ++++.++++..++.+.....| ..||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP-----------KQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 999999886 5999999642 1122 234667788888866543332 46999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
+++|++|+|||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|+++++|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999998764 37899999999999876 9999999999999876
No 237
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-38 Score=371.18 Aligned_cols=227 Identities=20% Similarity=0.350 Sum_probs=187.4
Q ss_pred cEEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC----CCCcEEEEcCeeCCCCCHHH
Q 000504 1207 KIELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE----PSGGRILIDGVDISMIGLQD 1280 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~----p~~G~I~IDG~dI~~i~l~~ 1280 (1458)
-++++|++++|+... ..+|+||||+|++||.+||||+||||||||+++|.|+++ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 379999999996532 359999999999999999999999999999999999997 48999999999999988776
Q ss_pred Hhc----ceEEEccCCC--Cccc-cHHHhc----CcCCCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCC
Q 000504 1281 LRS----RLSIIPQDPM--LFQG-TVRTNL----DPLEQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENW 1345 (1458)
Q Consensus 1281 LR~----~i~iIpQdp~--LF~g-TIR~NL----dp~~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1345 (1458)
+|+ ++++|||+|. ++.. |+.+|+ ...... ..+++.++|++++|.+.... ++ .....|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~----l~----~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASR----LD----VYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH----Hh----CCchhC
Confidence 553 6999999995 4432 555544 322111 23457788888888642211 22 334579
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhh-hcCEEEEEeCCEEEE
Q 000504 1346 SVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLE 1422 (1458)
Q Consensus 1346 SgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE 1422 (1458)
|||||||++|||||+.+|++||+||||++||..+...|.+.|++.. .+.|+|+|||+++.+. .||||+||++|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998864 3789999999999985 599999999999999
Q ss_pred ecChhHHhhcCCChHHHHH
Q 000504 1423 YDSPRQLLEDNSSSFSKLV 1441 (1458)
Q Consensus 1423 ~g~p~~Ll~~~~s~F~~l~ 1441 (1458)
.|+++++++++...|.+..
T Consensus 235 ~g~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 235 TGKAHDIFRAPRHPYTQAL 253 (326)
T ss_pred ECCHHHHhhCCCChHHHHH
Confidence 9999999987766665443
No 238
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-38 Score=362.12 Aligned_cols=211 Identities=27% Similarity=0.453 Sum_probs=186.4
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
++++|++++|++ .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++|+.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999988888888899999
Q ss_pred EccCCCCccc-cHHHhcCcC--------CC---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000504 1288 IPQDPMLFQG-TVRTNLDPL--------EQ---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1355 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~--------~~---~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1355 (1458)
+||++.+|.+ |+++|++.. +. ..++++.++++.+++.+... +. ...||||||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLAD-------RR----LTDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHc-------CC----cccCCHHHHHHHHH
Confidence 9999998877 999999742 11 12345777888888865433 22 34699999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1356 ARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1356 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
|||++++|++|||||||++||+++...+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 999999999999999999999999999999998764 47899999999999865 99999999999999999999874
No 239
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-38 Score=362.55 Aligned_cols=223 Identities=22% Similarity=0.375 Sum_probs=191.9
Q ss_pred CCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCC---
Q 000504 1203 PSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDIS--- 1274 (1458)
Q Consensus 1203 p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~--- 1274 (1458)
|..+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 12 ~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 12 PTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 56788999999999974 3599999999999999999999999999999999999875 7999999998874
Q ss_pred -CCCHHHHhcceEEEccCCCCccccHHHhcCcCC--------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCC
Q 000504 1275 -MIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE--------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENW 1345 (1458)
Q Consensus 1275 -~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~--------~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1345 (1458)
......+|++++|+||+|.+|.+|+++|+.... ...++++.++++.+++.+.+.. .......+|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKD-------RLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhH-------HHhCCcccC
Confidence 234567899999999999999999999996321 1224567888888887643322 223345679
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1346 SVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1346 SgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
|+|||||++|||||+++|++|+|||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999987667899999999999965 9999999999999999
Q ss_pred ChhHHhhcCC
Q 000504 1425 SPRQLLEDNS 1434 (1458)
Q Consensus 1425 ~p~~Ll~~~~ 1434 (1458)
+++++..++.
T Consensus 243 ~~~~~~~~~~ 252 (265)
T PRK14252 243 ATDTIFIKPK 252 (265)
T ss_pred CHHHHHhCCC
Confidence 9999976543
No 240
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-38 Score=355.45 Aligned_cols=203 Identities=25% Similarity=0.326 Sum_probs=175.6
Q ss_pred EEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1208 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999996421 469999999999999999999999999999999999999999999999998863 46789
Q ss_pred EEEccCCCCcc-ccHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1286 SIIPQDPMLFQ-GTVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1286 ~iIpQdp~LF~-gTIR~NLdp~---~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
+|+||+|.+|. .|+++|+... ... .++++.+++++.++.+...+.+ .+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999987 6999998632 111 2356778888888876554433 469999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEe--CCEEEEecCh
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLD--EGKVLEYDSP 1426 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~--~G~ivE~g~p 1426 (1458)
||+++|++|+|||||++||+.+...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|+ +|+++|.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999998763 37899999999998765 99999999 7999998763
No 241
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.4e-38 Score=354.72 Aligned_cols=200 Identities=25% Similarity=0.380 Sum_probs=174.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH---HHhcc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DLRSR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR~~ 1284 (1458)
|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++.. .+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999533 4699999999999999999999999999999999999999999999999999887643 46889
Q ss_pred eEEEccCCCCcc-ccHHHhcCcC----C---CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1285 LSIIPQDPMLFQ-GTVRTNLDPL----E---QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1285 i~iIpQdp~LF~-gTIR~NLdp~----~---~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
++|+||+|.+|. .|+++|+... + ...+++++++++..++.+.....| .+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999986 5999998642 1 112456788899988876544333 36999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCE
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGK 1419 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ 1419 (1458)
|||+++|++|+|||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999864 47899999999999986 89999999985
No 242
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-38 Score=360.95 Aligned_cols=220 Identities=21% Similarity=0.408 Sum_probs=188.7
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CCHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISM--IGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~--i~l~ 1279 (1458)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 4899999999964 359999999999999999999999999999999999986 479999999999853 4566
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcCC---CC---CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPLE---QH---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1353 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~---sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1353 (1458)
.+|++++|+||+|.+|..|+++|+.... .. .++++.++++.+++.+.+... ......+||||||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDK-------LKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHH-------hcCCcccCCHHHHHHH
Confidence 7889999999999999899999996421 11 234566678888887655321 2334567999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEe---------CCEEEEe
Q 000504 1354 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLD---------EGKVLEY 1423 (1458)
Q Consensus 1354 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~---------~G~ivE~ 1423 (1458)
+|||||+++|+||||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|+ +|++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999987767899999999999865 89999998 8999999
Q ss_pred cChhHHhhcCCC
Q 000504 1424 DSPRQLLEDNSS 1435 (1458)
Q Consensus 1424 g~p~~Ll~~~~s 1435 (1458)
|+++++.+++..
T Consensus 241 ~~~~~~~~~~~~ 252 (264)
T PRK14243 241 DRTEKIFNSPQQ 252 (264)
T ss_pred CCHHHHHhCCCc
Confidence 999999876543
No 243
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-38 Score=358.86 Aligned_cols=218 Identities=25% Similarity=0.398 Sum_probs=187.6
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCC--CHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMI--GLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1279 (1458)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999964 4599999999999999999999999999999999999875 799999999999653 345
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcCC---CC-C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPLE---QH-S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~-s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
.+|++++|+||+|.+|..|+++|+.... .. + ++++.++++.+++.+.+... ++ .....||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~---~~----~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDD---LK----KSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhH---hh----CCcccCCHHHHH
Confidence 6789999999999999999999996321 11 1 23466788888875443221 22 344579999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++||||++++|+||+|||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987667899999999999866 9999999999999999999998
Q ss_pred hcC
Q 000504 1431 EDN 1433 (1458)
Q Consensus 1431 ~~~ 1433 (1458)
.++
T Consensus 235 ~~~ 237 (251)
T PRK14270 235 LEP 237 (251)
T ss_pred cCC
Confidence 654
No 244
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-38 Score=377.69 Aligned_cols=204 Identities=25% Similarity=0.432 Sum_probs=178.7
Q ss_pred cceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHH----hcceEEEccCCCCccc-
Q 000504 1223 MVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL----RSRLSIIPQDPMLFQG- 1297 (1458)
Q Consensus 1223 ~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L----R~~i~iIpQdp~LF~g- 1297 (1458)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.|+...+..++ |++++|+||++.+|..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999999999999999999998876654 4689999999999975
Q ss_pred cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeC
Q 000504 1298 TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDE 1370 (1458)
Q Consensus 1298 TIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDE 1370 (1458)
|+++|+... ...+ ++++.++++.++|.++..+.| .+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 999999632 1122 345778888988876654443 3699999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChH
Q 000504 1371 ATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSF 1437 (1458)
Q Consensus 1371 aTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F 1437 (1458)
||++||+.+...+++.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+|+++++++...|
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999999999998764 47899999999999865 99999999999999999999987665444
No 245
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-38 Score=357.30 Aligned_cols=211 Identities=25% Similarity=0.409 Sum_probs=185.4
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+. ..+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .|+.+++
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 578999999974 359999999999999999999999999999999999999999999999999987654 3688999
Q ss_pred EccCCCCccc-cHHHhcCcC-C------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQG-TVRTNLDPL-E------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~-~------~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+|.+ |+++|+... . ...++++.++++..++.++....| .+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999976 999999631 1 112456778888888876655443 47999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1433 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~ 1433 (1458)
+++|++|+|||||+++|..+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|++.++.+.+
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~ 222 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEP 222 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCC
Confidence 999999999999999999999999999987643 7899999999999865 8999999999999999999988654
No 246
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-38 Score=356.33 Aligned_cols=212 Identities=24% Similarity=0.350 Sum_probs=179.2
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH-Hhcce
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i 1285 (1458)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .|+.+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999964 45999999999999999999999999999999999999999999999999998887655 67889
Q ss_pred EEEccCCCCccc-cHHHhcCcCCC-CCHH----HHHHHHHHc-CcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPLEQ-HSDQ----EIWEVINKC-HLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~~~-~sde----eI~~aL~~~-~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
+|+||++.+|.+ |+++|+..... .+.+ ++.++++.. ++.+ ..+. ....||+|||||++||||
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~-------~~~~----~~~~LS~G~~qrl~la~a 151 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHE-------RRIQ----RAGTMSGGEQQMLAIGRA 151 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHH-------HHhC----chhhCCHHHHHHHHHHHH
Confidence 999999999986 99999964211 1222 233333333 1221 1222 345799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
++++|+||+|||||++||+.+...+.+.|++.. +++|||++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 152 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 152 LMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred HHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 999999999999999999999999999998754 47999999999997755 99999999999999999999974
No 247
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-38 Score=367.23 Aligned_cols=217 Identities=28% Similarity=0.406 Sum_probs=181.8
Q ss_pred CccEEEEeeeEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC----C-
Q 000504 1205 SGKIELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM----I- 1276 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~----i- 1276 (1458)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. +
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46799999999996532 259999999999999999999999999999999999999999999999999853 2
Q ss_pred CHHHHhcceEEEccCC--CCccccHHHhcCcCC---CCCHHH----HHHHHHHcCcH-HHHHhcccccCccccCCCCCCC
Q 000504 1277 GLQDLRSRLSIIPQDP--MLFQGTVRTNLDPLE---QHSDQE----IWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWS 1346 (1458)
Q Consensus 1277 ~l~~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sdee----I~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS 1346 (1458)
+...+|++++|+||+| .+|..|+++|+.... ....++ +.+.++..++. +. ++ .....||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~-------~~----~~~~~LS 152 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDY-------VK----RSPFELS 152 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH-------hc----CChhhCC
Confidence 3567889999999998 477889999996321 123322 34455555542 21 22 3345799
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000504 1347 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1423 (1458)
Q Consensus 1347 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~ 1423 (1458)
+|||||++|||||+++|++|+|||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.
T Consensus 153 ~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~ 232 (289)
T PRK13645 153 GGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI 232 (289)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999999999998764 37899999999998754 999999999999999
Q ss_pred cChhHHhhc
Q 000504 1424 DSPRQLLED 1432 (1458)
Q Consensus 1424 g~p~~Ll~~ 1432 (1458)
|++++++++
T Consensus 233 g~~~~~~~~ 241 (289)
T PRK13645 233 GSPFEIFSN 241 (289)
T ss_pred CCHHHHhcC
Confidence 999988753
No 248
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-38 Score=375.75 Aligned_cols=218 Identities=25% Similarity=0.434 Sum_probs=189.5
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
..|+++|++++|.. ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++...+. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 35999999999964 359999999999999999999999999999999999999999999999999987664 47789
Q ss_pred EEEccCCCCccc-cHHHhcCcC-C--CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPL-E--QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~-~--~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
+|++|++.+|.. |+++|+... . ..+ .+++.++++..++.++..+.| .+||||||||++|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999986 999999732 1 222 245677888888866544433 369999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNS 1434 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~ 1434 (1458)
||+++|++|+||||||+||..+...+.+.|++.. .+.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++.
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~ 242 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPT 242 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCc
Confidence 9999999999999999999999999988777653 36899999999998765 99999999999999999999998877
Q ss_pred ChHH
Q 000504 1435 SSFS 1438 (1458)
Q Consensus 1435 s~F~ 1438 (1458)
..|.
T Consensus 243 ~~~~ 246 (377)
T PRK11607 243 TRYS 246 (377)
T ss_pred cHHH
Confidence 6653
No 249
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=3.1e-38 Score=339.61 Aligned_cols=172 Identities=36% Similarity=0.614 Sum_probs=162.4
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+.+..++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544469999999999999999999999999999999999999999999999999999988899999999
Q ss_pred EccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000504 1288 IPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILV 1367 (1458)
Q Consensus 1288 IpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILl 1367 (1458)
+||+|.+|++|+++|+ ||+|||||++||||++++|++|+
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~ll 119 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRILV 119 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 99999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEEeCCEE
Q 000504 1368 LDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVLDEGKV 1420 (1458)
Q Consensus 1368 LDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~~DrVlvL~~G~i 1420 (1458)
|||||++||+.+...+.+.|++.. +++|+|+++|+++.+..||+|++|++|++
T Consensus 120 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 120 LDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999998764 47899999999999988999999999974
No 250
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.3e-38 Score=354.63 Aligned_cols=211 Identities=27% Similarity=0.430 Sum_probs=177.8
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH-HhcceE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRLS 1286 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i~ 1286 (1458)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 578999999974 35999999999999999999999999999999999999999999999999998877654 467899
Q ss_pred EEccCCCCccc-cHHHhcCcC-CC--CCHHH-HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhcc
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPL-EQ--HSDQE-IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~-~~--~sdee-I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1361 (1458)
|+||++.+|.+ |+++|+... .. ..+++ ..++++..+ +++........+||||||||++||||+++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999987 999999632 11 12222 233333332 12222233345799999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1362 KKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1362 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
+|++|+|||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999998653 7899999999999986 9999999999999999999873
No 251
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-38 Score=358.85 Aligned_cols=223 Identities=24% Similarity=0.394 Sum_probs=189.4
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCC--CHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMI--GLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1279 (1458)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 4899999999963 3599999999999999999999999999999999999763 489999999999876 456
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcCC---C-C----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPLE---Q-H----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
+.|++++|+||+|.+|.+|+++|+.... . . .++.+.++++.+++.+.+.. .....+.+||+||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKD-------RLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHH-------HhhcChhhCCHHHHH
Confidence 7889999999999999999999997421 1 1 13346677777776543321 233445679999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++||||++.+|++++|||||++||..+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999965 9999999999999999999998
Q ss_pred hcCCChHH
Q 000504 1431 EDNSSSFS 1438 (1458)
Q Consensus 1431 ~~~~s~F~ 1438 (1458)
+++...+.
T Consensus 237 ~~~~~~~~ 244 (253)
T PRK14261 237 ENPHEELT 244 (253)
T ss_pred hCCCcHHH
Confidence 65543333
No 252
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-38 Score=366.19 Aligned_cols=215 Identities=27% Similarity=0.407 Sum_probs=182.1
Q ss_pred EEEEeeeEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC----CHHH
Q 000504 1208 IELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI----GLQD 1280 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~~ 1280 (1458)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997432 3599999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcceEEEccCC--CCccccHHHhcCcC---CCCCHHH----HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1281 LRSRLSIIPQDP--MLFQGTVRTNLDPL---EQHSDQE----IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1281 LR~~i~iIpQdp--~LF~gTIR~NLdp~---~~~sdee----I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
+|++++|+||+| .+|+.|+++|+... ...++++ +.++++..++.+.. ++ .....|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~----~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESL------FE----KNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhh------hh----CCcccCCHHHHH
Confidence 889999999998 68889999999632 1223332 34556666664211 12 234579999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998764 37899999999998865 999999999999999999998
Q ss_pred hhc
Q 000504 1430 LED 1432 (1458)
Q Consensus 1430 l~~ 1432 (1458)
+++
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 754
No 253
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-38 Score=362.18 Aligned_cols=213 Identities=22% Similarity=0.382 Sum_probs=188.0
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
-.|+++|++++|+. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999974 3599999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEccCCCCcc-ccHHHhcCcCC--------C---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000504 1286 SIIPQDPMLFQ-GTVRTNLDPLE--------Q---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1353 (1458)
Q Consensus 1286 ~iIpQdp~LF~-gTIR~NLdp~~--------~---~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1353 (1458)
+|+||++.+|. .|+++|+.... . ..+++++++++..++.+... .. ...||+|||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLAD-------QS----VDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-------CC----cccCChHHHHHH
Confidence 99999998875 59999996421 1 12345788888888876532 22 357999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1354 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1354 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
+||||++++|++|+|||||++||+.+...+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999988643 7899999999998865 9999999999999999999987
Q ss_pred h
Q 000504 1431 E 1431 (1458)
Q Consensus 1431 ~ 1431 (1458)
+
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 5
No 254
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-38 Score=356.22 Aligned_cols=204 Identities=27% Similarity=0.363 Sum_probs=178.7
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++ ..+|+++
T Consensus 11 ~~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~-----~~~~~~i 83 (257)
T PRK11247 11 TPLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPL-----AEAREDT 83 (257)
T ss_pred CcEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEH-----HHhhCce
Confidence 35999999999964 3599999999999999999999999999999999999999999999999876 3568899
Q ss_pred EEEccCCCCcc-ccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCC
Q 000504 1286 SIIPQDPMLFQ-GTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1363 (1458)
Q Consensus 1286 ~iIpQdp~LF~-gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1363 (1458)
+|+||+|.+|. .|+++|+... ....++++.++++..++.+.... ...+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANE-----------WPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhcC-----------ChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 5999999743 22235678888998888654332 23579999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000504 1364 RILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPR 1427 (1458)
Q Consensus 1364 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~ 1427 (1458)
++|+|||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.++..
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998753 37899999999999865 9999999999999988754
No 255
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-38 Score=355.34 Aligned_cols=210 Identities=25% Similarity=0.442 Sum_probs=184.6
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|.. + +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~--~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE--F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC--c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 578999999964 3 8999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred EccCCCCcc-ccHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQ-GTVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~-gTIR~NLdp~---~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||++.+|. .|+++|+... ... .++++.++++.+++.+.+.+.+ .+||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 144 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARAL 144 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHHH
Confidence 999999995 6999999631 111 2345678888888877654433 46999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1433 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~ 1433 (1458)
+++|++|+|||||++||..+.+.+.+.|++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999999999998643 7999999999999876 9999999999999999999998654
No 256
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=5.6e-38 Score=369.65 Aligned_cols=227 Identities=25% Similarity=0.386 Sum_probs=188.2
Q ss_pred cEEEEeeeEEeCC--CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEEcCeeCCCCCHHHH
Q 000504 1207 KIELENLLVQYNP--TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS---GGRILIDGVDISMIGLQDL 1281 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~--~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~---~G~I~IDG~dI~~i~l~~L 1281 (1458)
.++++|++++|+. +...+++|+||+|++||++||+|+||||||||+++|+|+++|. +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 5899999999963 2236999999999999999999999999999999999999996 9999999999999987765
Q ss_pred h----cceEEEccCC--CCcc-ccHHHhcC----cCCCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCC
Q 000504 1282 R----SRLSIIPQDP--MLFQ-GTVRTNLD----PLEQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWS 1346 (1458)
Q Consensus 1282 R----~~i~iIpQdp--~LF~-gTIR~NLd----p~~~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1346 (1458)
| ++|+|||||| .++. -|+.+|+. .....+. +++.+.|+.+++.+ +.+ .+......||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~-------~~~-~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPE-------ARK-RMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCC-------hHH-HhcCCcccCC
Confidence 4 4799999999 4554 37777663 2222232 23556677666532 111 1334556899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000504 1347 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1423 (1458)
Q Consensus 1347 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~ 1423 (1458)
||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||+|+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999987643 7899999999999874 999999999999999
Q ss_pred cChhHHhhcCCChHHHHH
Q 000504 1424 DSPRQLLEDNSSSFSKLV 1441 (1458)
Q Consensus 1424 g~p~~Ll~~~~s~F~~l~ 1441 (1458)
|+++++++++...|.+..
T Consensus 244 g~~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 244 GNARDVFYQPSHPYSIGL 261 (330)
T ss_pred CCHHHHHhCCCCHHHHHH
Confidence 999999988776666543
No 257
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-38 Score=364.87 Aligned_cols=215 Identities=32% Similarity=0.456 Sum_probs=182.5
Q ss_pred cEEEEeeeEEeCCCC---CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC----CHH
Q 000504 1207 KIELENLLVQYNPTL---PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI----GLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~ 1279 (1458)
.|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997432 3599999999999999999999999999999999999999999999999998753 245
Q ss_pred HHhcceEEEccCC--CCccccHHHhcCcC---CCCCH----HHHHHHHHHcCcH-HHHHhcccccCccccCCCCCCChhH
Q 000504 1280 DLRSRLSIIPQDP--MLFQGTVRTNLDPL---EQHSD----QEIWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp--~LF~gTIR~NLdp~---~~~sd----eeI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
..|+.++|+||+| .+|..|+++|+... ...+. +.+.++++.+++. +.. +.+ ..+||+||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-------~~~----~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLI-------SKS----PFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHh-------hCC----cccCCHHH
Confidence 6788999999998 57888999999521 12222 2356667777764 232 222 35799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChh
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPR 1427 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~ 1427 (1458)
|||++|||||+++|++|||||||++||+.+...+.+.|++.. ++.|||++||+++.+. -||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999864 4689999999999986 49999999999999999999
Q ss_pred HHhhc
Q 000504 1428 QLLED 1432 (1458)
Q Consensus 1428 ~Ll~~ 1432 (1458)
+++++
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 98753
No 258
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-38 Score=357.99 Aligned_cols=211 Identities=27% Similarity=0.391 Sum_probs=185.4
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 3 LEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred EEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 789999999964 459999999999999999999999999999999999999999999999999988888888899999
Q ss_pred EccCCCC-ccccHHHhcCcCCC---C----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPML-FQGTVRTNLDPLEQ---H----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~L-F~gTIR~NLdp~~~---~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||++.+ +..|+++|+..... . .++++.++++..++.+... .. ...||||||||++|||||
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LSgGe~qrv~la~al 149 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAG-------RD----YPQLSGGEQQRVQLARVL 149 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhc-------CC----cccCCHHHHHHHHHHHHH
Confidence 9999987 66799999864211 1 2345778888888865432 22 247999999999999999
Q ss_pred c------cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHHh
Q 000504 1360 L------KKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1360 L------r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
+ ++|++|+|||||++||+.+...+.+.|++.. .+.|||++||+++.+. -||+|++|++|++++.|+++++.
T Consensus 150 ~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 150 AQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred hcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHh
Confidence 9 5999999999999999999999999998764 4789999999999986 49999999999999999999987
Q ss_pred h
Q 000504 1431 E 1431 (1458)
Q Consensus 1431 ~ 1431 (1458)
+
T Consensus 230 ~ 230 (258)
T PRK13548 230 T 230 (258)
T ss_pred C
Confidence 5
No 259
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-38 Score=355.51 Aligned_cols=212 Identities=24% Similarity=0.426 Sum_probs=181.2
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH-Hhcce
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i 1285 (1458)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 3889999999964 35999999999999999999999999999999999999999999999999998877654 57899
Q ss_pred EEEccCCCCccc-cHHHhcCcCC----CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPLE----QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~~----~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
+|+||+|.+|.+ |+++|+.... ..+. +.+.+.++..++.+. .......||+|||||++||
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHL-----------RDSMGQSLSGGERRRVEIA 149 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHH-----------hhcchhhCCHHHHHHHHHH
Confidence 999999999885 9999997432 1121 234555555555432 2233457999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
||++++|++|+|||||++||+.+...+.+.+++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999988754 47899999999987755 99999999999999999999875
No 260
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-38 Score=359.40 Aligned_cols=222 Identities=24% Similarity=0.417 Sum_probs=189.9
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCC-----CcEEEEcCeeCCC--CCH
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS-----GGRILIDGVDISM--IGL 1278 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~-----~G~I~IDG~dI~~--i~l 1278 (1458)
+.|+++|++++|+. +.+|+|+||+|++||.+||+|++|||||||+++|.|+++|+ +|+|.+||.+++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 46999999999964 35999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HHHhcceEEEccCCCCccccHHHhcCcC---CC-CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1279 QDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQ-HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1279 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~-~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
..+|+.++++||++.+|..|+++|+... .. .+ ++++.++++.+++.+++..+ .......||+|||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHK-------IHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhH-------hcCCcccCCHHHH
Confidence 6788999999999999999999999632 11 12 23467788888886655422 2334467999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeC-----CEEEE
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDE-----GKVLE 1422 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~-----G~ivE 1422 (1458)
||++|||||+++|+||+|||||++||.++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 236 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE 236 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE
Confidence 99999999999999999999999999999999999998742 47999999999999865 899999999 99999
Q ss_pred ecChhHHhhcCCCh
Q 000504 1423 YDSPRQLLEDNSSS 1436 (1458)
Q Consensus 1423 ~g~p~~Ll~~~~s~ 1436 (1458)
.|+|+++.+++...
T Consensus 237 ~~~~~~~~~~~~~~ 250 (261)
T PRK14258 237 FGLTKKIFNSPHDS 250 (261)
T ss_pred eCCHHHHHhCCCCH
Confidence 99999998765543
No 261
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-38 Score=349.10 Aligned_cols=200 Identities=29% Similarity=0.416 Sum_probs=174.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999642 2 39999999999999999999999999999999999999999999999987653 4678999
Q ss_pred EccCCCCccc-cHHHhcCcCCC-------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQG-TVRTNLDPLEQ-------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~~~-------~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+|.+ |+++|+..... ..++++.++++.+++.+.....| ..||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999986 99999973211 13456888999999876654443 36999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
+++|++|+|||||++||.++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999864 37899999999999866 9999999999998764
No 262
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=6.1e-38 Score=352.95 Aligned_cols=206 Identities=23% Similarity=0.292 Sum_probs=178.9
Q ss_pred cEEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH---H
Q 000504 1207 KIELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---L 1281 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---L 1281 (1458)
.|+++|++++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 589999999997532 25999999999999999999999999999999999999999999999999998877654 3
Q ss_pred -hcceEEEccCCCCccc-cHHHhcCcC---CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1282 -RSRLSIIPQDPMLFQG-TVRTNLDPL---EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1282 -R~~i~iIpQdp~LF~g-TIR~NLdp~---~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
+++++|+||+|.+|.+ |+++|+... ... ..+++.++++.+++.+.....| ..||+|||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHH
Confidence 3689999999999885 999998631 111 2345778888888876654433 3699999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEeCCEEEEe
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEY 1423 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~ 1423 (1458)
++|||||+++|++|+|||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+..||++++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999998763 26899999999999988999999999999874
No 263
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=7.7e-38 Score=353.88 Aligned_cols=210 Identities=26% Similarity=0.424 Sum_probs=183.4
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+. +++|+|+||+|.+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++|
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999974 359999999999999999999999999999999999999999999999999986543 4789999
Q ss_pred EccCCCCccc-cHHHhcCcCC---CC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQG-TVRTNLDPLE---QH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~~---~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+|.+ |+++|+.... .. .++++.++++..++.+...+. ..+||+||+||++||||+
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~laral 145 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRY-----------PNQLSGGQRQRVALARAL 145 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 9999999986 9999996321 11 234567788888876554332 247999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
+++|++++|||||++||.++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999999987543 6899999999999866 999999999999999999999853
No 264
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=5.7e-38 Score=367.28 Aligned_cols=212 Identities=25% Similarity=0.373 Sum_probs=182.7
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|+. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999964 3599999999999999999999999999999999999999999999999998754 356789999
Q ss_pred EEccCCCCcc-ccHHHhcCcC---CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1287 IIPQDPMLFQ-GTVRTNLDPL---EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1287 iIpQdp~LF~-gTIR~NLdp~---~~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
|+||+|.+|. .|+++|+..+ ...+.+ ++.++++.+++.+. ++..+ ..||||||||++||||
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-------~~~~~----~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-------ADVRV----ALLSGGMKRRLTLARA 149 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-------hcCch----hhCCHHHHHHHHHHHH
Confidence 9999999885 5999999632 123332 34456666666433 34444 4699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|+++|++|+|||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999998864 47899999999999875 999999999999999999999754
No 265
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=359.66 Aligned_cols=219 Identities=27% Similarity=0.422 Sum_probs=187.4
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCCC-HHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMIG-LQD 1280 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i~-l~~ 1280 (1458)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 5899999999964 3699999999999999999999999999999999999986 6999999999998763 456
Q ss_pred HhcceEEEccCCCCccccHHHhcCcC----CCCCHHHH----HHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1281 LRSRLSIIPQDPMLFQGTVRTNLDPL----EQHSDQEI----WEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1281 LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~sdeeI----~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
+|++++|+||+|.+|..|+++|+... ...+++++ .+.++.+++.+... +.......+||+|||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LSgGq~qr 171 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVK-------DRLSDSPFRLSGGQQQL 171 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhCCcccCCHHHHHH
Confidence 88999999999999999999999632 12344443 34556666643321 22334556899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
++|||||+++|++|||||||++||..+.+.+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 172 l~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 172 LCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999999865 99999999999999999999987
Q ss_pred cCC
Q 000504 1432 DNS 1434 (1458)
Q Consensus 1432 ~~~ 1434 (1458)
++.
T Consensus 252 ~~~ 254 (276)
T PRK14271 252 SPK 254 (276)
T ss_pred CcC
Confidence 543
No 266
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-38 Score=358.76 Aligned_cols=219 Identities=23% Similarity=0.422 Sum_probs=185.8
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--CCHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--IGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~l~ 1279 (1458)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGS--FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECC--EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 4899999999964 3599999999999999999999999999999999999974 69999999999854 4456
Q ss_pred HHhcceEEEccCCCCccc-cHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1280 DLRSRLSIIPQDPMLFQG-TVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~g-TIR~NLdp~----~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
.+|+.++++||++.+|.. |+++|+... +..+ ++.+.++++.+++.+.+.. .++ ....+||+|||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKD---RLD----KPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh---Hhh----CCcccCCHHHH
Confidence 788999999999999974 999998631 1111 3456677888887543321 123 33457999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEe------CCEEEEe
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLD------EGKVLEY 1423 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~------~G~ivE~ 1423 (1458)
||++||||++++|++|+|||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||+|++|+ +|++++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 9999999999999999999999999999999999999987667899999999999865 99999997 8999999
Q ss_pred cChhHHhhcCC
Q 000504 1424 DSPRQLLEDNS 1434 (1458)
Q Consensus 1424 g~p~~Ll~~~~ 1434 (1458)
|+++++++++.
T Consensus 235 ~~~~~~~~~~~ 245 (258)
T PRK14241 235 DDTEKIFSNPT 245 (258)
T ss_pred CCHHHHHhCcC
Confidence 99999986543
No 267
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-38 Score=362.39 Aligned_cols=212 Identities=28% Similarity=0.429 Sum_probs=182.3
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCC--CCCHHHHhcce
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDIS--MIGLQDLRSRL 1285 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~--~i~l~~LR~~i 1285 (1458)
|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 689999999964 45999999999999999999999999999999999999999999999999985 33456788999
Q ss_pred EEEccCCC--CccccHHHhcCcC---CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1286 SIIPQDPM--LFQGTVRTNLDPL---EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1286 ~iIpQdp~--LF~gTIR~NLdp~---~~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
+|+||+|. +|..|+.+|+... ...++ +++.++++.+++.++. +.. ..+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-------HQP----IQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-------cCC----chhCCHHHHHHHHHH
Confidence 99999985 5778999998642 11222 3456677888876543 333 347999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|||+.+|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|++++++++
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998864 47899999999999865 999999999999999999998754
No 268
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-38 Score=356.01 Aligned_cols=219 Identities=25% Similarity=0.413 Sum_probs=187.7
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCC-CCCHHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDIS-MIGLQD 1280 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~-~i~l~~ 1280 (1458)
.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4889999999964 4599999999999999999999999999999999999986 5999999999986 455678
Q ss_pred HhcceEEEccCCCCccccHHHhcCcC---CCC-C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1281 LRSRLSIIPQDPMLFQGTVRTNLDPL---EQH-S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1281 LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~-s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
+|+.++|+||+|.+|.+|+++|+... ... . ++++.++++.+++.+.+. ..++. ....||+|||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~----~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK---DRLKS----HAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh---HHhhc----CcccCCHHHHHH
Confidence 89999999999999999999999632 111 1 234566777777765432 12333 345799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999987667899999999999876 99999999999999999999876
Q ss_pred cCC
Q 000504 1432 DNS 1434 (1458)
Q Consensus 1432 ~~~ 1434 (1458)
++.
T Consensus 234 ~~~ 236 (249)
T PRK14253 234 NPK 236 (249)
T ss_pred CCC
Confidence 543
No 269
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-38 Score=357.47 Aligned_cols=223 Identities=24% Similarity=0.371 Sum_probs=186.8
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCC-----CcEEEEcCeeCCC--CCHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS-----GGRILIDGVDISM--IGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~-----~G~I~IDG~dI~~--i~l~ 1279 (1458)
-++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 3789999999963 35999999999999999999999999999999999999874 8999999999875 3455
Q ss_pred HHhcceEEEccCCCCccc-cHHHhcCcC---CC-CCHHH----HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1280 DLRSRLSIIPQDPMLFQG-TVRTNLDPL---EQ-HSDQE----IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~g-TIR~NLdp~---~~-~sdee----I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
.+|++++|+||+|.+|.+ |+++|+... .. ..+++ ..+.++..++.+.+ ++.++.++ .+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~~----~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKTPA----TGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcCCc----ccCCHHHH
Confidence 788999999999999985 999999631 11 12333 33334555554332 23345443 57999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
||++||||++++|+||+|||||++||..+...+.+.|++..+++|+|++||+++.+.+ ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667999999999999986 999999999999999999999
Q ss_pred hhcCCChHH
Q 000504 1430 LEDNSSSFS 1438 (1458)
Q Consensus 1430 l~~~~s~F~ 1438 (1458)
++++...+.
T Consensus 235 ~~~~~~~~~ 243 (252)
T PRK14272 235 FTNPRDERT 243 (252)
T ss_pred HhCcCcHHH
Confidence 877655453
No 270
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-37 Score=359.19 Aligned_cols=221 Identities=24% Similarity=0.412 Sum_probs=189.1
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--CC
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISM--IG 1277 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~--i~ 1277 (1458)
.-.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ..
T Consensus 18 ~~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 18 HSVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred CceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 336999999999964 3599999999999999999999999999999999999863 59999999999864 34
Q ss_pred HHHHhcceEEEccCCCCccccHHHhcCcCC---C---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1278 LQDLRSRLSIIPQDPMLFQGTVRTNLDPLE---Q---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1278 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~---~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
...+|++++|+||+|.+|..|+++|+.... . ..++++.++++.+++.+.+.. .++. ....||+||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~~~----~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD---KLKE----KGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH---HhcC----CcccCCHHHHH
Confidence 456789999999999999899999996421 1 124456777888887655432 2333 34579999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEe---------CCEEE
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLD---------EGKVL 1421 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~---------~G~iv 1421 (1458)
|++|||||+++|++|||||||++||..+...+.+.|++..+++|||+|+|+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999988777999999999999865 99999997 89999
Q ss_pred EecChhHHhhcCC
Q 000504 1422 EYDSPRQLLEDNS 1434 (1458)
Q Consensus 1422 E~g~p~~Ll~~~~ 1434 (1458)
+.|+++++.+++.
T Consensus 249 ~~g~~~~~~~~~~ 261 (274)
T PRK14265 249 EFSPTEQMFGSPQ 261 (274)
T ss_pred EeCCHHHHHhCCC
Confidence 9999999986554
No 271
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.2e-38 Score=351.49 Aligned_cols=197 Identities=29% Similarity=0.451 Sum_probs=169.4
Q ss_pred EEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEE
Q 000504 1209 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSII 1288 (1458)
Q Consensus 1209 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iI 1288 (1458)
+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 46899999964 35999999999999999999999999999999999999999999999998764 578899999
Q ss_pred ccCCCC---ccccHHHhcCcCCC-----------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1289 PQDPML---FQGTVRTNLDPLEQ-----------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1289 pQdp~L---F~gTIR~NLdp~~~-----------~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
||+|.+ |..|+++|+..... ..++++.++++.+++.+.... .+ .+||||||||++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~----~~LSgG~~qrv~ 142 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-------QI----GELSGGQQQRVL 142 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-------Cc----ccCCHHHHHHHH
Confidence 999976 56899999863211 123467888888888765433 22 469999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
|||||+++|++|+|||||++||+++...+.+.|++.. +++|||+|||+++.+.. ||+|++|++| +++.|
T Consensus 143 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 143 LARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999998864 57899999999999876 8999999986 55543
No 272
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=357.05 Aligned_cols=222 Identities=19% Similarity=0.310 Sum_probs=191.1
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCC--CHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMI--GLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i--~l~ 1279 (1458)
.+.+++.+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... ...
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4789999999964 3599999999999999999999999999999999999986 799999999998643 445
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcCCC------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPLEQ------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1353 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~~------~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1353 (1458)
.+|++++|+||+|.+|..|+++|+..... ..++++.++++.+++.+.+... ..+...+||+|||||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~-------~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDK-------LKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhh-------hhCCcccCCHHHHHHH
Confidence 67889999999999999999999974311 1235678889998886655322 2345568999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEe--------CCEEEEec
Q 000504 1354 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLD--------EGKVLEYD 1424 (1458)
Q Consensus 1354 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~--------~G~ivE~g 1424 (1458)
+||||++++|+||+|||||++||+.+...+.+.|++..+++|+|+|||+++.+.+ ||+|++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 9999999999999999999999999999999999987677899999999999865 99999996 89999999
Q ss_pred ChhHHhhcCCChH
Q 000504 1425 SPRQLLEDNSSSF 1437 (1458)
Q Consensus 1425 ~p~~Ll~~~~s~F 1437 (1458)
+++++++++...+
T Consensus 239 ~~~~~~~~~~~~~ 251 (261)
T PRK14263 239 PTAQIFQNPREQL 251 (261)
T ss_pred CHHHHHhCCCcHH
Confidence 9999987654333
No 273
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-38 Score=361.45 Aligned_cols=213 Identities=27% Similarity=0.445 Sum_probs=183.6
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC--CCHHHHhcce
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM--IGLQDLRSRL 1285 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~--i~l~~LR~~i 1285 (1458)
|+++|++++|+.+ .++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 6899999999633 359999999999999999999999999999999999999999999999999853 2345688999
Q ss_pred EEEccCC--CCccccHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1286 SIIPQDP--MLFQGTVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1286 ~iIpQdp--~LF~gTIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
+|+||+| .+|..|+++|+.... ..+ .+++.++++.+++.++. |..+ ..||+|||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~~----~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFE-------NKPP----HHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhh-------cCCh----hhCCHHHHHHHHHH
Confidence 9999998 578899999996311 122 23467788888875443 3333 46999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
||++++|++|+|||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999864 37899999999999875 999999999999999999998753
No 274
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-38 Score=357.70 Aligned_cols=212 Identities=22% Similarity=0.383 Sum_probs=181.3
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHH-hcce
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL-RSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~i 1285 (1458)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5899999999963 369999999999999999999999999999999999999999999999999998876664 4569
Q ss_pred EEEccCCCCccc-cHHHhcCcCCC-------------------CC---HHHHHHHHHHcCcHHHHHhcccccCccccCCC
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPLEQ-------------------HS---DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDG 1342 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~~~-------------------~s---deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1342 (1458)
+|+||+|.+|.+ |+++|+..... .. .+++.+.++..++.+. .....
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~ 151 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEH-----------ANRQA 151 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhh-----------hhCCh
Confidence 999999999986 99999874210 00 1234445555555432 23344
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCE
Q 000504 1343 ENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGK 1419 (1458)
Q Consensus 1343 ~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ 1419 (1458)
.+||+|||||++||||++++|++|+|||||++||+.+...+.+.|++..+ ++|||+++|+++.+.+ ||+|++|++|+
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 231 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGT 231 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 57999999999999999999999999999999999999999999987643 6899999999999866 99999999999
Q ss_pred EEEecChhHHhh
Q 000504 1420 VLEYDSPRQLLE 1431 (1458)
Q Consensus 1420 ivE~g~p~~Ll~ 1431 (1458)
+++.|+++++.+
T Consensus 232 i~~~~~~~~~~~ 243 (255)
T PRK11300 232 PLANGTPEEIRN 243 (255)
T ss_pred EEecCCHHHHhh
Confidence 999999999875
No 275
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=350.37 Aligned_cols=208 Identities=24% Similarity=0.394 Sum_probs=182.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++||+++|+. . ..|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~-~---~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHH-L---PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECC-c---cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 689999999963 2 249999999999999999999999999999999999999999999999887644 3678999
Q ss_pred EccCCCCccc-cHHHhcCc-CCC------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQG-TVRTNLDP-LEQ------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp-~~~------~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+|.+ |+++|+.. +.. ..++++.++++.+++.+.+...| ..||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999986 99999963 211 12456888999999987765544 36999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
+++|++|+|||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999988643 7899999999999865 999999999999999999999854
No 276
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=7.9e-38 Score=359.89 Aligned_cols=226 Identities=26% Similarity=0.368 Sum_probs=188.0
Q ss_pred cEEEEeeeEEeCC-------CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH
Q 000504 1207 KIELENLLVQYNP-------TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~-------~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~ 1279 (1458)
.|+++||+++|+. +..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 4899999999952 123699999999999999999999999999999999999999999999999999765556
Q ss_pred HHhcceEEEccCCC--Cccc-cHHHhcCc----CCC----CCHHHHHHHHHHcCcH-HHHHhcccccCccccCCCCCCCh
Q 000504 1280 DLRSRLSIIPQDPM--LFQG-TVRTNLDP----LEQ----HSDQEIWEVINKCHLA-EIVRQDQRLLDAPVAEDGENWSV 1347 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~--LF~g-TIR~NLdp----~~~----~sdeeI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSg 1347 (1458)
..|++++|+||+|. ++.. |+.+|+.. ... ..++++.++++.+++. +.. +..+ .+||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~----~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA-------SYYP----HMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH-------hcCc----hhcCH
Confidence 66778999999985 4444 78888742 111 1234678889998884 322 2222 46999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1348 GQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1348 GQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
|||||++|||||+++|+||||||||++||+.+...+.+.|++.. .+.|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999864 37899999999999986 9999999999999999
Q ss_pred ChhHHhhcCC-ChHHHHHHH
Q 000504 1425 SPRQLLEDNS-SSFSKLVAE 1443 (1458)
Q Consensus 1425 ~p~~Ll~~~~-s~F~~l~~~ 1443 (1458)
+++++.+++. ..+++++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~ 252 (267)
T PRK15112 233 STADVLASPLHELTKRLIAG 252 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHh
Confidence 9999987643 334455544
No 277
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-37 Score=356.51 Aligned_cols=222 Identities=25% Similarity=0.385 Sum_probs=187.7
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC--C---CCcEEEEcCeeCCC--CCHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE--P---SGGRILIDGVDISM--IGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~--p---~~G~I~IDG~dI~~--i~l~ 1279 (1458)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999974 469999999999999999999999999999999999975 4 58999999999864 3455
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcC---CCC-C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPL---EQH-S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~-s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
.+|++++|+||+|.+|..|+++|+... ... . ++++.++++.+++.+.+. ..++ ....+||+||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~---~~~~----~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVK---DHLH----ESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchh---hHHh----cCcccCCHHHHH
Confidence 678899999999999999999998631 111 1 345666777777654332 1123 334579999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++||||++++|++|||||||++||..+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+..
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987667899999999999865 9999999999999999999998
Q ss_pred hcCCChH
Q 000504 1431 EDNSSSF 1437 (1458)
Q Consensus 1431 ~~~~s~F 1437 (1458)
.++...+
T Consensus 236 ~~~~~~~ 242 (252)
T PRK14255 236 LNPKEKE 242 (252)
T ss_pred cCCCChH
Confidence 7655444
No 278
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=364.64 Aligned_cols=220 Identities=27% Similarity=0.477 Sum_probs=188.9
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCCC--C
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISMI--G 1277 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~i--~ 1277 (1458)
+..|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++... +
T Consensus 43 ~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 446999999999964 359999999999999999999999999999999999986 6899999999998753 4
Q ss_pred HHHHhcceEEEccCCCCccccHHHhcCcC-C-------------------CCCHHHHHHHHHHcCcHHHHHhcccccCcc
Q 000504 1278 LQDLRSRLSIIPQDPMLFQGTVRTNLDPL-E-------------------QHSDQEIWEVINKCHLAEIVRQDQRLLDAP 1337 (1458)
Q Consensus 1278 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~-------------------~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~ 1337 (1458)
...+|++++|+||++.+|.+|+++|+... . +..++++.++++.+++.+.+. ..
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVN-------DR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhh-------HH
Confidence 56788999999999999999999999631 0 012345777888887754332 22
Q ss_pred ccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEE-EEE
Q 000504 1338 VAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLV-LVL 1415 (1458)
Q Consensus 1338 v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrV-lvL 1415 (1458)
......+||||||||++|||||+++|+||||||||++||+.+...+.+.|++..++.|||+|+|+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 34455689999999999999999999999999999999999999999999988777899999999999876 9997 578
Q ss_pred eCCEEEEecChhHHhhcC
Q 000504 1416 DEGKVLEYDSPRQLLEDN 1433 (1458)
Q Consensus 1416 ~~G~ivE~g~p~~Ll~~~ 1433 (1458)
++|++++.|+++++.+++
T Consensus 274 ~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 274 TGGELVEYDDTDKIFENP 291 (305)
T ss_pred cCCEEEEeCCHHHHHhCc
Confidence 999999999999998653
No 279
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=5.6e-38 Score=370.36 Aligned_cols=212 Identities=26% Similarity=0.415 Sum_probs=183.6
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++...+ ...|++++
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999997654 57889999
Q ss_pred EEccCCCCcc-ccHHHhcCcCC---CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1287 IIPQDPMLFQ-GTVRTNLDPLE---QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1287 iIpQdp~LF~-gTIR~NLdp~~---~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
|+||++.+|. .|+++|+..+. ..+. +.+.++++.+++.+ ..+..+ .+||+|||||++||||
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~-------~~~~~~----~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-------KADARV----SDLSGGMKRRLTLARA 186 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-------hhCCCh----hhCCHHHHHHHHHHHH
Confidence 9999998874 59999996422 1222 23445566666543 345555 3699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|+.+|++|+|||||++||+.+...+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999864 47899999999999976 999999999999999999999764
No 280
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=7.6e-38 Score=365.65 Aligned_cols=211 Identities=23% Similarity=0.353 Sum_probs=186.1
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
++++|++++|++ ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999963 469999999999999999999999999999999999999999999999999977 44678999999
Q ss_pred EccCCCCccc-cHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQG-TVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+|.+ |+++||.... ..+ .+++.++++..++.+.. +.. ..+||+|||||++|||||
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~~----~~~LS~G~~qrv~la~al 148 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQ-------HKK----IGQLSKGYRQRVGLAQAL 148 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHh-------cCc----hhhCCHHHHHHHHHHHHH
Confidence 9999999987 9999996321 122 34566777777776543 222 357999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
+++|++|+|||||++||+.+.+.+++.|++..+++|||+++|+++.+.. ||||++|++|++++.|+++++.++
T Consensus 149 ~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 149 IHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999988778999999999999876 999999999999999999998754
No 281
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-38 Score=337.07 Aligned_cols=209 Identities=27% Similarity=0.380 Sum_probs=173.0
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
|+++|+++.|.. ...+++ ||+|++||+++++||+||||||+|+.|.++++|++|++ .++|
T Consensus 2 I~~~nvsk~y~~--------~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I-~i~g~~i~~~d~~~ 72 (309)
T COG1125 2 IEFENVSKRYGN--------KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEI-LIDGEDISDLDPVE 72 (309)
T ss_pred ceeeeeehhcCC--------ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceE-EECCeecccCCHHH
Confidence 789999999863 467888 99999999999999999999999999999999999997 8887
Q ss_pred ---EEEEEcCCCCCC-CCcHHHHHhcCCC---CCHHH----HHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHH
Q 000504 660 ---KKAYVPQSSWIQ-TGTIRENILFGKD---MRQSF----YEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQR 728 (1458)
Q Consensus 660 ---~~ayv~Q~~~i~-~~Ti~enI~fg~~---~~~~~----y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 728 (1458)
++|||-|+.-+| +.||.|||.+=.. +++++ -++.++..+|+.. ........+|||||+||
T Consensus 73 LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~---------~~~~RyP~eLSGGQQQR 143 (309)
T COG1125 73 LRRKIGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPS---------EYADRYPHELSGGQQQR 143 (309)
T ss_pred HHHhhhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHH---------HHhhcCchhcCcchhhH
Confidence 369999997775 6799999997532 44433 3444444555431 12345678999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchh-ccCCEEEEEeCCeEEEcccchhh
Q 000504 729 IQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFL-DAADLVLVMKDGKIEQSGKYEDL 806 (1458)
Q Consensus 729 v~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l-~~~D~i~~l~~G~i~~~g~~~~l 806 (1458)
|.+||||..+|+|+|+||||+||||-++.++-++...-.. -+||+|+||||+++. +.+|||.+|++|+|++.++++++
T Consensus 144 VGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~i 223 (309)
T COG1125 144 VGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEI 223 (309)
T ss_pred HHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHH
Confidence 9999999999999999999999999998888665443222 389999999999985 56999999999999999999999
Q ss_pred hhhcchHHHHH
Q 000504 807 IADQNSELVRQ 817 (1458)
Q Consensus 807 ~~~~~~~~~~~ 817 (1458)
+.++..+|.+.
T Consensus 224 l~~Pan~FV~~ 234 (309)
T COG1125 224 LANPANDFVED 234 (309)
T ss_pred HhCccHHHHHH
Confidence 98777776553
No 282
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=361.83 Aligned_cols=224 Identities=24% Similarity=0.369 Sum_probs=188.3
Q ss_pred CccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCCC--C
Q 000504 1205 SGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-----PSGGRILIDGVDISMI--G 1277 (1458)
Q Consensus 1205 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-----p~~G~I~IDG~dI~~i--~ 1277 (1458)
...|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... .
T Consensus 37 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 345899999999964 359999999999999999999999999999999999865 4999999999998653 3
Q ss_pred HHHHhcceEEEccCCCCccccHHHhcCcC---CCC-C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000504 1278 LQDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQH-S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1278 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~-s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
...+|++++|+||+|.+|.+|+++|+... ... + ++++.++++..++.+.+. +.++. ....|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~~----~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS---DRLDK----NALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh---hHhhC----ChhhCCHHH
Confidence 34678999999999999989999999632 111 1 234567777777653322 22333 345799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
|||++|||||+++|++|||||||++||+++...+.+.|++..+++|||+++|+++.+.+ ||+|++|++|++++.|++.+
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999865 99999999999999999999
Q ss_pred HhhcCCChH
Q 000504 1429 LLEDNSSSF 1437 (1458)
Q Consensus 1429 Ll~~~~s~F 1437 (1458)
+.+++...+
T Consensus 268 ~~~~~~~~~ 276 (286)
T PRK14275 268 LFTNPKDRM 276 (286)
T ss_pred HHhCCCcHH
Confidence 987655434
No 283
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-38 Score=349.06 Aligned_cols=200 Identities=26% Similarity=0.459 Sum_probs=172.3
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
++++|++++|.. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 578999999963 359999999999999999999999999999999999999999999999998753 56789999
Q ss_pred EccCCCCccc-cHHHhcCcCC---CC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQG-TVRTNLDPLE---QH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~~---~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+|.+ |+++|+.... .. .++++.++++..++.+.... ...+||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la~al 143 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANK-----------RVEELSKGNQQKVQFIAAV 143 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhC-----------cHhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999985321 11 13456667777777554322 2357999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
+++|++|+|||||++||+.+.+.+.+.|++.. +++|||+++|+++.+.. ||++++|++|++++.|
T Consensus 144 ~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 144 IHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999998754 46899999999999865 9999999999998864
No 284
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.3e-37 Score=350.26 Aligned_cols=207 Identities=26% Similarity=0.400 Sum_probs=172.1
Q ss_pred EEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCH---HHHh
Q 000504 1208 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL---QDLR 1282 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l---~~LR 1282 (1458)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 269999999999999999999999999999999999999999999999999988763 5788
Q ss_pred cceEEEccCC--CCc-cccHHHhcCc----CC-CCCHHHH----HHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1283 SRLSIIPQDP--MLF-QGTVRTNLDP----LE-QHSDQEI----WEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1283 ~~i~iIpQdp--~LF-~gTIR~NLdp----~~-~~sdeeI----~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
++++|+||+| .++ ..|+++|+.. .. ...+++. .+.++..++.+ ........+||+|||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~ 151 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPE----------EVLNRYPHELSGGQR 151 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCCh----------hHhhCCchhcCHHHH
Confidence 9999999999 344 4699999852 11 1112211 24555555521 112233457999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhh-hcCEEEEEeCCEEEEec
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g 1424 (1458)
||++|||||+++|+||+|||||++||+.+...+.+.|++..+ ++|||++||+++.+. .||+|++|++|++++.|
T Consensus 152 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 152 QRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999999998654 789999999999987 49999999999998765
No 285
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.7e-37 Score=347.88 Aligned_cols=203 Identities=27% Similarity=0.373 Sum_probs=174.4
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH---Hhcc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD---LRSR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~---LR~~ 1284 (1458)
|+++|++++|+++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++... +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999533 46999999999999999999999999999999999999999999999999998876543 6889
Q ss_pred eEEEccCCCCc-cccHHHhcCcC---CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1285 LSIIPQDPMLF-QGTVRTNLDPL---EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1285 i~iIpQdp~LF-~gTIR~NLdp~---~~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
++|+||+|.+| ..|+++|+... ...+++ ++.++++..++.+...+. ..+||+|||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNF-----------PIQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------chhCCHHHHHHHHHH
Confidence 99999999874 56999999642 122322 456777888776544332 247999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLE 1422 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE 1422 (1458)
||++++|++|+|||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999999763 46899999999999976 89999999999863
No 286
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=366.94 Aligned_cols=226 Identities=20% Similarity=0.345 Sum_probs=187.8
Q ss_pred cEEEEeeeEEeCC--CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC----CCCcEEEEcCeeCCCCCHHH
Q 000504 1207 KIELENLLVQYNP--TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE----PSGGRILIDGVDISMIGLQD 1280 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~--~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~----p~~G~I~IDG~dI~~i~l~~ 1280 (1458)
-++++|++++|.. +...+++||||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.++.+++.++
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3799999999953 22359999999999999999999999999999999999986 58999999999999888766
Q ss_pred Hh----cceEEEccCCC--Ccc-ccHHHhcCc-C------CC------CCHHHHHHHHHHcCcHHHHHhcccccCccccC
Q 000504 1281 LR----SRLSIIPQDPM--LFQ-GTVRTNLDP-L------EQ------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAE 1340 (1458)
Q Consensus 1281 LR----~~i~iIpQdp~--LF~-gTIR~NLdp-~------~~------~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e 1340 (1458)
++ ++|++|||+|. ++. -||.+|+.. . +. ..++++.++|++++|.+.-. -++..
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~----~~~~~--- 155 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD----AMRSF--- 155 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH----HHhCC---
Confidence 53 47999999996 333 488888741 1 10 11346778899988864211 12222
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeC
Q 000504 1341 DGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDE 1417 (1458)
Q Consensus 1341 ~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~ 1417 (1458)
...||||||||++|||||+.+|+|||+||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||+|++|++
T Consensus 156 -p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 156 -PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred -chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 246999999999999999999999999999999999999999999998653 7899999999999965 999999999
Q ss_pred CEEEEecChhHHhhcCCChHHHH
Q 000504 1418 GKVLEYDSPRQLLEDNSSSFSKL 1440 (1458)
Q Consensus 1418 G~ivE~g~p~~Ll~~~~s~F~~l 1440 (1458)
|+|+|.|+++++++++...|.+.
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~~ 257 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQA 257 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHHH
Confidence 99999999999998776666553
No 287
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.3e-38 Score=347.18 Aligned_cols=199 Identities=30% Similarity=0.421 Sum_probs=168.2
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|.+|+|+. .+.++| ||++++|++++|+|||||||||||++|+|.++|.+|++ .++|
T Consensus 2 ~L~~~~ls~~y~~--------~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V-~l~g~~i~~~~~k 72 (258)
T COG1120 2 MLEVENLSFGYGG--------KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEV-LLDGKDIASLSPK 72 (258)
T ss_pred eeEEEEEEEEECC--------eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEE-EECCCchhhcCHH
Confidence 4789999999974 589999 99999999999999999999999999999999999997 8888
Q ss_pred ----EEEEEcCCCCC-CCCcHHHHHhcCCCC--------CH---HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCCh
Q 000504 660 ----KKAYVPQSSWI-QTGTIRENILFGKDM--------RQ---SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1458)
Q Consensus 660 ----~~ayv~Q~~~i-~~~Ti~enI~fg~~~--------~~---~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSG 723 (1458)
.+|||||++.. +..||+|-+.+|+.. .+ +..+++++.+++.+- ..+...+|||
T Consensus 73 elAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~l-----------a~r~~~~LSG 141 (258)
T COG1120 73 ELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHL-----------ADRPVDELSG 141 (258)
T ss_pred HHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHH-----------hcCcccccCh
Confidence 57999999765 456999999999632 12 223334555554332 2345668999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchh-ccCCEEEEEeCCeEEEcc
Q 000504 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFL-DAADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l-~~~D~i~~l~~G~i~~~g 801 (1458)
||||||.|||||+++|+|+|||||||+||....-++++.+.+.. .+|+|+|+|+||++.. .+||++++|++|+++..|
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G 221 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQG 221 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeec
Confidence 99999999999999999999999999999999999987544333 3489999999999986 569999999999999999
Q ss_pred cchhhhh
Q 000504 802 KYEDLIA 808 (1458)
Q Consensus 802 ~~~~l~~ 808 (1458)
+++|.+.
T Consensus 222 ~p~evlT 228 (258)
T COG1120 222 TPEEVLT 228 (258)
T ss_pred CcchhcC
Confidence 9999886
No 288
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.1e-37 Score=356.85 Aligned_cols=211 Identities=27% Similarity=0.408 Sum_probs=184.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 689999999964 359999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EccCCC-CccccHHHhcCcCC----C-------CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHH
Q 000504 1288 IPQDPM-LFQGTVRTNLDPLE----Q-------HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCL 1355 (1458)
Q Consensus 1288 IpQdp~-LF~gTIR~NLdp~~----~-------~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1355 (1458)
+||+|. .+..|+++|+.... . ..++++.++++.+++.+.. |.. ...||+|||||++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LS~G~~qrl~l 148 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLA-------DRD----MSTLSGGERQRVHV 148 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhh-------cCC----cccCCHHHHHHHHH
Confidence 999985 45679999996421 0 1233577888888886543 233 34699999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHHhh
Q 000504 1356 ARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1356 ARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
|||++.+|++++|||||++||+.+...+.+.|++.. ++.|||++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 149 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 149 ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 999999999999999999999999999999998764 3689999999999995 599999999999999999998864
No 289
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.6e-37 Score=345.67 Aligned_cols=201 Identities=23% Similarity=0.395 Sum_probs=176.2
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
++++|++++|+. +++|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ..|++++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999963 568999999999999999999999999999999999999999999999987643 46788999
Q ss_pred EccCCCCccc-cHHHhcCc-CC-C-----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQG-TVRTNLDP-LE-Q-----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp-~~-~-----~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+|.+ |+++|+.. .. . ..++++.++++..++.+...+.| .+||+|||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999975 99999862 21 1 13456778899999877655444 36999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecC
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDS 1425 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~ 1425 (1458)
+++|+|++|||||++||.++...+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 99999999999999999999999999999864 37899999999999865 99999999999999874
No 290
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=8.7e-38 Score=348.01 Aligned_cols=200 Identities=29% Similarity=0.464 Sum_probs=172.2
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC--CCHHHHhcce
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM--IGLQDLRSRL 1285 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~--i~l~~LR~~i 1285 (1458)
|+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 578999999964 359999999999999999999999999999999999999999999999999853 3456788999
Q ss_pred EEEccCCCCcc-ccHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHH
Q 000504 1286 SIIPQDPMLFQ-GTVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1286 ~iIpQdp~LF~-gTIR~NLdp~----~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1356 (1458)
+|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+..... ..+||+|||||++||
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la 147 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAY-----------PAQLSGGQQQRVAIA 147 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhC-----------ccccCHHHHHHHHHH
Confidence 99999999987 5999999642 1222 23456677777776544332 247999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000504 1357 RVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1420 (1458)
Q Consensus 1357 RALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~i 1420 (1458)
||++++|++|+|||||++||+++.+.+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|++
T Consensus 148 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 148 RALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999764 47899999999999965 999999999974
No 291
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.3e-38 Score=361.49 Aligned_cols=213 Identities=29% Similarity=0.503 Sum_probs=189.3
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++.+|.. ...+|+||||+|++||.+|++||||||||||+++|.|+++|++|+|.++|.|...- ....|+++|
T Consensus 4 ~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 4788999999973 23599999999999999999999999999999999999999999999999998765 678999999
Q ss_pred EEccCCCCccc-cHHHhcCcCC-------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPLE-------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~~-------~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
|+||+|.+++. |++|||+.+. ...++.+.+.++..+|.+.- +.++ ..||+|||||+.||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~~----~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NKKV----RTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Ccch----hhcCHHHHHHHHHHHH
Confidence 99999998877 9999998542 12356788999999987621 3333 4699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC-C-cEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREETS-R-CTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~-~-~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|+.+|++|+|||||++||+.+...+.+.|++..+ + +||++.||.++.+.. ||+|++|++|+++.+|+++++.+.
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999998765 3 699999999999987 999999999999999999998754
No 292
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-38 Score=343.98 Aligned_cols=211 Identities=27% Similarity=0.369 Sum_probs=174.4
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
|++++++..|... .......++| ||+|++||+.+|+|.+|+|||||+++|.++-.|++|++ .++|
T Consensus 2 I~l~~vsK~~~~~---~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v-~v~G~di~~l~~~~ 77 (339)
T COG1135 2 IELENVSKTFGQT---GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSV-FVDGQDLTALSEAE 77 (339)
T ss_pred eEEEeeeeeeccC---CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceE-EEcCEecccCChHH
Confidence 7889999888753 0123467899 99999999999999999999999999999999999997 8888
Q ss_pred ------EEEEEcCCCCCCC-CcHHHHHhcCCCC----CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHH
Q 000504 660 ------KKAYVPQSSWIQT-GTIRENILFGKDM----RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQR 728 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~enI~fg~~~----~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 728 (1458)
+||+++|++-+.+ .||.+||.|..+. .++..++|.+.+.+.. ++ ...+....+||||||||
T Consensus 78 Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVg----L~----dk~~~yP~qLSGGQKQR 149 (339)
T COG1135 78 LRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVG----LS----DKADRYPAQLSGGQKQR 149 (339)
T ss_pred HHHHHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcC----Ch----hhhccCchhcCcchhhH
Confidence 3699999998876 7999999998653 3445555555443321 11 12346678999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchh
Q 000504 729 IQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYED 805 (1458)
Q Consensus 729 v~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~ 805 (1458)
|+|||||..+|+|+|.|||||||||++.+.|.+. +...- -|-|+++|||.++.++. ||||.||++|++++.|+..+
T Consensus 150 VaIARALa~~P~iLL~DEaTSALDP~TT~sIL~L-L~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~ 228 (339)
T COG1135 150 VAIARALANNPKILLCDEATSALDPETTQSILEL-LKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSE 228 (339)
T ss_pred HHHHHHHhcCCCEEEecCccccCChHHHHHHHHH-HHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHH
Confidence 9999999999999999999999999999999874 43332 38999999999999987 99999999999999999999
Q ss_pred hhhhcchHH
Q 000504 806 LIADQNSEL 814 (1458)
Q Consensus 806 l~~~~~~~~ 814 (1458)
+..++..+.
T Consensus 229 vF~~Pk~~~ 237 (339)
T COG1135 229 VFANPKHAI 237 (339)
T ss_pred hhcCcchHH
Confidence 987554443
No 293
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.7e-37 Score=368.69 Aligned_cols=205 Identities=21% Similarity=0.325 Sum_probs=176.5
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCe----eCCCCCHHHH---h-cceEEEccCCC
Q 000504 1222 PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGV----DISMIGLQDL---R-SRLSIIPQDPM 1293 (1458)
Q Consensus 1222 ~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~----dI~~i~l~~L---R-~~i~iIpQdp~ 1293 (1458)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. |+...+.+.+ | ++++|+||++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999996 6777765554 3 58999999999
Q ss_pred Ccc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000504 1294 LFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRI 1365 (1458)
Q Consensus 1294 LF~-gTIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1365 (1458)
+|+ .|+++|+... ...+ .+.+.++++.++|.++....| .+||||||||++|||||+++|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 6999999632 1122 235677888888876543332 36999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChH
Q 000504 1366 LVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSF 1437 (1458)
Q Consensus 1366 LlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F 1437 (1458)
|+||||||+||+.+...+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|++++.++...|
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~ 260 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDY 260 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHH
Confidence 999999999999999999999988653 7899999999999855 99999999999999999999997665444
No 294
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.8e-37 Score=352.82 Aligned_cols=222 Identities=22% Similarity=0.368 Sum_probs=182.7
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCee-----CCCCCHHH-
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVD-----ISMIGLQD- 1280 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~d-----I~~i~l~~- 1280 (1458)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5899999999964 359999999999999999999999999999999999999999999999999 87776654
Q ss_pred ---HhcceEEEccCCC--Ccc-ccHHHhcCc----CCCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCC
Q 000504 1281 ---LRSRLSIIPQDPM--LFQ-GTVRTNLDP----LEQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWS 1346 (1458)
Q Consensus 1281 ---LR~~i~iIpQdp~--LF~-gTIR~NLdp----~~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1346 (1458)
.|+.++|+||+|. ++. .|+++|+.. +.... .+++.++++..++.+ ......+.+||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS 153 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDA----------ARIDDLPTTFS 153 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCCh----------hHHhCCCccCC
Confidence 3567999999984 333 478888741 22111 223445555555431 12334556899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000504 1347 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1423 (1458)
Q Consensus 1347 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~ 1423 (1458)
||||||++|||||+++|+||+|||||++||+.+...+.+.|++..+ +.|||+|||+++.+.+ ||+|++|++|++++.
T Consensus 154 ~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~ 233 (258)
T PRK11701 154 GGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVES 233 (258)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999987543 7899999999999975 999999999999999
Q ss_pred cChhHHhhcCCChHHHH
Q 000504 1424 DSPRQLLEDNSSSFSKL 1440 (1458)
Q Consensus 1424 g~p~~Ll~~~~s~F~~l 1440 (1458)
|+++++..++...|.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~ 250 (258)
T PRK11701 234 GLTDQVLDDPQHPYTQL 250 (258)
T ss_pred CCHHHHhcCCCCHHHHH
Confidence 99999987655445443
No 295
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-37 Score=352.69 Aligned_cols=223 Identities=28% Similarity=0.421 Sum_probs=187.9
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcC------eeCCCCCHHH
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDG------VDISMIGLQD 1280 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG------~dI~~i~l~~ 1280 (1458)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+.+...
T Consensus 10 ~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 10 VFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred heeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 5999999999964 4599999999999999999999999999999999999999986666554 6777777778
Q ss_pred HhcceEEEccCCCCccc-cHHHhcCcC----CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1281 LRSRLSIIPQDPMLFQG-TVRTNLDPL----EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1281 LR~~i~iIpQdp~LF~g-TIR~NLdp~----~~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
+|++++|+||+|.+|.+ |+++|+... +...++ .+.++++..++.+.+.. .+ ...+..||+||||
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~----~~~~~~LS~G~~q 160 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYD---RL----NSPASQLSGGQQQ 160 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchh---hh----cCCcccCCHHHHH
Confidence 89999999999999986 999999732 111222 34667777777543311 12 2344679999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHHh
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
|++||||++++|++|+|||||++||..+...+.+.|++..+++|||++||+++.+. .||++++|++|++++.|+++++.
T Consensus 161 rl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 161 RLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999998767799999999999995 59999999999999999999998
Q ss_pred hcCCChHH
Q 000504 1431 EDNSSSFS 1438 (1458)
Q Consensus 1431 ~~~~s~F~ 1438 (1458)
+++...+.
T Consensus 241 ~~~~~~~~ 248 (257)
T PRK14246 241 TSPKNELT 248 (257)
T ss_pred hCCCcHHH
Confidence 76554454
No 296
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3.5e-37 Score=352.17 Aligned_cols=223 Identities=23% Similarity=0.332 Sum_probs=184.3
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC----CCcEEEEcCeeCCCCCHHHHh
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP----SGGRILIDGVDISMIGLQDLR 1282 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p----~~G~I~IDG~dI~~i~l~~LR 1282 (1458)
.|+++|++++| + .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 58999999999 2 3599999999999999999999999999999999999999 999999999998632 2234
Q ss_pred cceEEEccCCC-Ccc--ccHHHhcCc----C-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1283 SRLSIIPQDPM-LFQ--GTVRTNLDP----L-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1283 ~~i~iIpQdp~-LF~--gTIR~NLdp----~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
+.++|+||+|. .|. .|+.+|+.. . ....+++++++++.+++.+.. +.+......||+|||||++
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--------~~~~~~~~~LS~Gq~qrv~ 150 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENAA--------RVLKLYPFEMSGGMLQRMM 150 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCChh--------hhhhcCCcccCHHHHHHHH
Confidence 67999999985 443 477777531 1 123456788889988875421 1223344679999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
|||||+++|+||||||||++||..+.+.+.+.|++..+ ++|||+++|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 151 laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 151 IALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999988643 6899999999999865 99999999999999999999987
Q ss_pred cCCC-hHHHHHH
Q 000504 1432 DNSS-SFSKLVA 1442 (1458)
Q Consensus 1432 ~~~s-~F~~l~~ 1442 (1458)
++.. .++.++.
T Consensus 231 ~~~~~~~~~~~~ 242 (254)
T PRK10418 231 APKHAVTRSLVS 242 (254)
T ss_pred CCCCHHHHHHHH
Confidence 6544 3444443
No 297
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.6e-37 Score=348.49 Aligned_cols=209 Identities=24% Similarity=0.351 Sum_probs=180.1
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|+++.|.. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5899999999963 35999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCCCCccccHHHhcCcC----CC-CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhcc
Q 000504 1287 IIPQDPMLFQGTVRTNLDPL----EQ-HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1287 iIpQdp~LF~gTIR~NLdp~----~~-~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1361 (1458)
|+||+|.+|+.|+++|+... .. ..++++.++++..++.+.. ++ ....+||+|||||++|||||++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~----~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTI------LT----KNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHH------hc----CCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999631 11 1234566777777774311 12 2345799999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhhcCEEEEEe-CCEEEEecChh
Q 000504 1362 KKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVIDNDLVLVLD-EGKVLEYDSPR 1427 (1458)
Q Consensus 1362 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~~DrVlvL~-~G~ivE~g~p~ 1427 (1458)
+|++|||||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+..||+|++|+ ++..++.|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999999999864 3789999999999998899999995 56666777764
No 298
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.5e-37 Score=363.65 Aligned_cols=203 Identities=25% Similarity=0.419 Sum_probs=176.7
Q ss_pred EeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCc
Q 000504 1216 QYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLF 1295 (1458)
Q Consensus 1216 ~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF 1295 (1458)
+|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4642 359999999999999999999999999999999999999999999999999976 3457789999999999999
Q ss_pred cc-cHHHhcCcCC---CCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000504 1296 QG-TVRTNLDPLE---QHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILV 1367 (1458)
Q Consensus 1296 ~g-TIR~NLdp~~---~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILl 1367 (1458)
.+ |+++|+.... ..+ ++++.++++.+++.+.. +..+ .+||||||||++|||||+++|++|+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LSgG~~qrv~la~al~~~p~lll 147 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEAA-------DRPV----GTYSGGMRRRLDIAASLIHQPDVLF 147 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-------CCch----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 86 9999996421 122 34577788888876543 3333 4699999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1368 LDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1368 LDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 148 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 148 LDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999999998864 46899999999999875 999999999999999999998764
No 299
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-37 Score=340.38 Aligned_cols=198 Identities=33% Similarity=0.513 Sum_probs=165.6
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1458)
..|+++|.+|+|+.+ +.|+| ||++++|++++|+||||||||||+|+|+|.++|.+|++ .+.|
T Consensus 3 ~~i~v~nl~v~y~~~--------~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i-~~~g~~~~~~~~ 73 (254)
T COG1121 3 PMIEVENLTVSYGNR--------PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEI-KIFGKPVRKRRK 73 (254)
T ss_pred cEEEEeeeEEEECCE--------eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceE-EEcccccccccc
Confidence 368999999999742 69999 99999999999999999999999999999999999997 6654
Q ss_pred --EEEEEcCC---CCCCCCcHHHHHhcCCCCC-----------HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCCh
Q 000504 660 --KKAYVPQS---SWIQTGTIRENILFGKDMR-----------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1458)
Q Consensus 660 --~~ayv~Q~---~~i~~~Ti~enI~fg~~~~-----------~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSG 723 (1458)
+||||||. .|-|..||+|-+..|.... .+..+++++..++. |+ ......+|||
T Consensus 74 ~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~----------~~r~i~~LSG 142 (254)
T COG1121 74 RLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DL----------RDRQIGELSG 142 (254)
T ss_pred CCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hh----------hCCcccccCc
Confidence 59999996 4678889999999985432 24455555555544 21 2345668999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhc-cCCEEEEEeCCeEEEcc
Q 000504 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g 801 (1458)
||+|||-|||||.++||+++|||||+++|+.++..+++ ++..+. +|+||++||||++.+. .+|+|+.|+ +++...|
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~-lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G 220 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYD-LLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASG 220 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEecc
Confidence 99999999999999999999999999999999888776 565554 4899999999999876 599999885 5677889
Q ss_pred cchhhhh
Q 000504 802 KYEDLIA 808 (1458)
Q Consensus 802 ~~~~l~~ 808 (1458)
++++..+
T Consensus 221 ~~~~~~~ 227 (254)
T COG1121 221 PPEEVLT 227 (254)
T ss_pred ChhhccC
Confidence 9998876
No 300
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.1e-37 Score=352.15 Aligned_cols=212 Identities=21% Similarity=0.279 Sum_probs=177.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccC--CCCCcEEEEcCeeCCCCCHHHH-hcc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV--EPSGGRILIDGVDISMIGLQDL-RSR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~IDG~dI~~i~l~~L-R~~ 1284 (1458)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999963 35999999999999999999999999999999999994 7999999999999988877664 456
Q ss_pred eEEEccCCCCccc-cHHHhcCcC----CC------CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhH
Q 000504 1285 LSIIPQDPMLFQG-TVRTNLDPL----EQ------HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1285 i~iIpQdp~LF~g-TIR~NLdp~----~~------~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1349 (1458)
++|+||+|.+|.+ |+++|+... .. .+ ++++.++++..++.+.. ++..+. ..||+||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LS~G~ 149 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF------LNRSVN---EGFSGGE 149 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh------cccccc---cCcCHHH
Confidence 9999999999987 899998521 10 11 23456667777664211 233332 2499999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh--cCEEEEEeCCEEEEecCh
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID--NDLVLVLDEGKVLEYDSP 1426 (1458)
Q Consensus 1350 rQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~--~DrVlvL~~G~ivE~g~p 1426 (1458)
|||++|||||+++|++|+|||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++
T Consensus 150 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (243)
T TIGR01978 150 KKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDV 229 (243)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCH
Confidence 999999999999999999999999999999999999999864 46899999999999976 799999999999999998
Q ss_pred hHHh
Q 000504 1427 RQLL 1430 (1458)
Q Consensus 1427 ~~Ll 1430 (1458)
+++-
T Consensus 230 ~~~~ 233 (243)
T TIGR01978 230 ELAK 233 (243)
T ss_pred HHhc
Confidence 7654
No 301
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-37 Score=367.15 Aligned_cols=214 Identities=24% Similarity=0.390 Sum_probs=185.7
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC----CHHHHhc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI----GLQDLRS 1283 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~~LR~ 1283 (1458)
|++ |++++|... .+ |+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... .....|+
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 23 99999999999999999999999999999999999999999999998753 2445688
Q ss_pred ceEEEccCCCCccc-cHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhcc
Q 000504 1284 RLSIIPQDPMLFQG-TVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1284 ~i~iIpQdp~LF~g-TIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1361 (1458)
+++|+||++.+|.. |+++|+... ....++++.++++.+++.+...+.| .+||||||||++|||||++
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHHHc
Confidence 99999999999975 999999742 3344567888999988876554433 4799999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChH
Q 000504 1362 KKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSF 1437 (1458)
Q Consensus 1362 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F 1437 (1458)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++...|
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~~~ 224 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAMRP 224 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcchhh
Confidence 9999999999999999999999999987653 6899999999998866 99999999999999999999998776333
No 302
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.8e-37 Score=328.02 Aligned_cols=203 Identities=29% Similarity=0.460 Sum_probs=172.8
Q ss_pred CccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC-------
Q 000504 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------- 659 (1458)
Q Consensus 588 ~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------- 659 (1458)
...|+++++++++.+ ..++++ ||+|++||+++|+||+||||||||++|+|+++|++|++ .+.|
T Consensus 6 ~~~I~vr~v~~~fG~--------~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI-~i~G~~i~~ls 76 (263)
T COG1127 6 EPLIEVRGVTKSFGD--------RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEI-LIDGEDIPQLS 76 (263)
T ss_pred cceEEEeeeeeecCC--------EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeE-EEcCcchhccC
Confidence 457999999999964 478899 99999999999999999999999999999999999997 7776
Q ss_pred ---------EEEEEcCCCCCCCC-cHHHHHhcCC----CCCHHHHHHH----HHHhhhhhh-HHhhcCCCcccccCCCCC
Q 000504 660 ---------KKAYVPQSSWIQTG-TIRENILFGK----DMRQSFYEEV----LEGCALNQD-IEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 ---------~~ayv~Q~~~i~~~-Ti~enI~fg~----~~~~~~y~~v----l~~c~l~~d-l~~l~~gd~t~ig~~g~~ 720 (1458)
++|+++|+.-+|+. ||+||+.|.. .+.++..++. +++++|..+ .+.+ ..+
T Consensus 77 ~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----------PsE 145 (263)
T COG1127 77 EEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLY-----------PSE 145 (263)
T ss_pred HHHHHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----------chh
Confidence 36999999999865 9999999963 2344444433 566777666 4443 458
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhC--CcEEEEEecccchhcc-CCEEEEEeCCeE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLS--QKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~--~~tvilvtH~~~~l~~-~D~i~~l~~G~i 797 (1458)
||||++.|++||||+..||+++++|||||+|||.++. .|+++++.+.+ +-|+++||||++.+.. ||+|+++.||+|
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~-~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv 224 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAG-VIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKV 224 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHH-HHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEE
Confidence 9999999999999999999999999999999999755 55777876653 7899999999998765 999999999999
Q ss_pred EEcccchhhhhhcc
Q 000504 798 EQSGKYEDLIADQN 811 (1458)
Q Consensus 798 ~~~g~~~~l~~~~~ 811 (1458)
...|+++|+.+..+
T Consensus 225 ~~~Gt~~el~~sd~ 238 (263)
T COG1127 225 IAEGTPEELLASDD 238 (263)
T ss_pred EEeCCHHHHHhCCC
Confidence 99999999988333
No 303
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.7e-36 Score=391.69 Aligned_cols=111 Identities=19% Similarity=0.298 Sum_probs=96.9
Q ss_pred ccCc-cccCCCCCCChhHHHHHHHHHHhccCC---CEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh
Q 000504 1333 LLDA-PVAEDGENWSVGQRQLVCLARVLLKKK---RILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI 1407 (1458)
Q Consensus 1333 gLdt-~v~e~G~nLSgGQrQrl~LARALLr~~---~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~ 1407 (1458)
||+. ..+.....||||||||+.|||+|+++| +++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 4544 356667789999999999999999999 9999999999999999999999998764 4789999999999999
Q ss_pred hcCEEEEE------eCCEEEEecChhHHhhcCCChHHHHHHH
Q 000504 1408 DNDLVLVL------DEGKVLEYDSPRQLLEDNSSSFSKLVAE 1443 (1458)
Q Consensus 1408 ~~DrVlvL------~~G~ivE~g~p~~Ll~~~~s~F~~l~~~ 1443 (1458)
.||+|++| ++|+|++.|+|+++.+++.+.=.+.++.
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~s~t~~~l~~ 939 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEASYTGRYLKP 939 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCcccHHHHHHHH
Confidence 99999999 7999999999999998776655444443
No 304
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.4e-36 Score=349.74 Aligned_cols=231 Identities=36% Similarity=0.624 Sum_probs=197.6
Q ss_pred HHHHHhcccCCCCCCCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHH
Q 000504 565 RIQEFIKEDNQKKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSI 643 (1458)
Q Consensus 565 RI~~fL~~~e~~~~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~l 643 (1458)
.+.+-|..+.+++...+ ..++...++++|+++.+ .+.+++ ||++++|++++|+|+||||||||+++|
T Consensus 16 ~~~~~~~~~~~~~~~~~--~~~~~~~l~i~nls~~~----------~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I 83 (282)
T cd03291 16 GFGELLEKAKQENNDRK--HSSDDNNLFFSNLCLVG----------APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLI 83 (282)
T ss_pred HHHHHHhcccccccccc--cCCCCCeEEEEEEEEec----------ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 34555555443322222 22345679999999962 257899 999999999999999999999999999
Q ss_pred hCCccCCCCcEEEECCEEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCCh
Q 000504 644 LGEIPRISGAAIKVHGKKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1458)
Q Consensus 644 lG~~~~~~G~~i~~~g~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSG 723 (1458)
+|+++|.+|++ .++|.++|++|++++++.|++||+.++....+.++.+.++++.+.+.+..++.+..+.+++.+.+|||
T Consensus 84 ~Gl~~p~~G~I-~i~g~i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSg 162 (282)
T cd03291 84 LGELEPSEGKI-KHSGRISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSG 162 (282)
T ss_pred hCCCCCCCcEE-EECCEEEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCH
Confidence 99999999997 89999999999999988999999999865555566777888888888888898888888899999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccc
Q 000504 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKY 803 (1458)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~ 803 (1458)
|||||++||||++.+|+++||||||++||+.+...+.+.++..+.+++|+|++||+++++..||++++|++|+++..|+.
T Consensus 163 Gq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~ 242 (282)
T cd03291 163 GQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTF 242 (282)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999998887776555555568999999999999888999999999999999999
Q ss_pred hhhhh
Q 000504 804 EDLIA 808 (1458)
Q Consensus 804 ~~l~~ 808 (1458)
+++..
T Consensus 243 ~~~~~ 247 (282)
T cd03291 243 SELQS 247 (282)
T ss_pred HHHHh
Confidence 88875
No 305
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-37 Score=352.85 Aligned_cols=211 Identities=23% Similarity=0.359 Sum_probs=183.8
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCC--------CcEEEEcCeeCCCCCHH
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS--------GGRILIDGVDISMIGLQ 1279 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~--------~G~I~IDG~dI~~i~l~ 1279 (1458)
|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 789999999964 35999999999999999999999999999999999999998 99999999999888888
Q ss_pred HHhcceEEEccCCC-CccccHHHhcCcCC--------CC---CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCCh
Q 000504 1280 DLRSRLSIIPQDPM-LFQGTVRTNLDPLE--------QH---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSV 1347 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~-LF~gTIR~NLdp~~--------~~---sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1347 (1458)
.+|+.++|+||++. +|..|+++|+.... .. .++.++++++..++.+.. + .....|||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LSg 148 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALV-------G----RDVTTLSG 148 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhh-------c----CCcccCCH
Confidence 88889999999986 57889999996421 11 123467788888775432 2 23357999
Q ss_pred hHHHHHHHHHHhc---------cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhh-hcCEEEEE
Q 000504 1348 GQRQLVCLARVLL---------KKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVI-DNDLVLVL 1415 (1458)
Q Consensus 1348 GQrQrl~LARALL---------r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~-~~DrVlvL 1415 (1458)
|||||++|||||+ .+|++|||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+. .||++++|
T Consensus 149 G~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l 228 (272)
T PRK13547 149 GELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAML 228 (272)
T ss_pred HHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE
Confidence 9999999999999 59999999999999999999999999998643 689999999999986 49999999
Q ss_pred eCCEEEEecChhHHhh
Q 000504 1416 DEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1416 ~~G~ivE~g~p~~Ll~ 1431 (1458)
++|++++.|+++++++
T Consensus 229 ~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 229 ADGAIVAHGAPADVLT 244 (272)
T ss_pred ECCeEEEecCHHHHcC
Confidence 9999999999999874
No 306
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.4e-37 Score=347.94 Aligned_cols=193 Identities=24% Similarity=0.316 Sum_probs=148.8
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.+-+.||+|.|+... |.+++++|-|.--.+|+||||+|-|||||+++|.|-++|+.|+..=+ -|-+||
T Consensus 586 vLGlH~VtFgy~gqk-pLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQK-PLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCCCC-chhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 356899999997654 58999999999999999999999999999999999999999986533 355788
Q ss_pred EEccCCC--C-ccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCC
Q 000504 1287 IIPQDPM--L-FQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1363 (1458)
Q Consensus 1287 iIpQdp~--L-F~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1363 (1458)
...|... | -..|--+.|.-.-...-++-..+|...||....... .-..||||||-|++||-.-|+.|
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fGL~sHAHTi----------kikdLSGGQKaRValaeLal~~P 723 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARKQLGTFGLASHAHTI----------KIKDLSGGQKARVALAELALGGP 723 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHHHhhhhhhhhccceE----------eeeecCCcchHHHHHHHHhcCCC
Confidence 8888652 1 122544544332233445566777777765433211 12469999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcC-EEEEEeCCEEEEe
Q 000504 1364 RILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDND-LVLVLDEGKVLEY 1423 (1458)
Q Consensus 1364 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~D-rVlvL~~G~ivE~ 1423 (1458)
+||||||||++||.++-..+-++|+++ +..||+|+|+-..|..-| ..+|+++-.|-|.
T Consensus 724 DvlILDEPTNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 724 DVLILDEPTNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCNLWVVENQGIDEI 782 (807)
T ss_pred CEEEecCCCCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCceEEEEccCChhhc
Confidence 999999999999999999999999985 458999999988886533 3456665555443
No 307
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=7.7e-37 Score=351.11 Aligned_cols=221 Identities=23% Similarity=0.368 Sum_probs=185.2
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEEcCeeCCCCC-----H
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS---GGRILIDGVDISMIG-----L 1278 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~---~G~I~IDG~dI~~i~-----l 1278 (1458)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+ .
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 4899999999963 45999999999999999999999999999999999999986 499999999987542 3
Q ss_pred HHHhcceEEEccCCCCccc-cHHHhcCcCC---------------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCC
Q 000504 1279 QDLRSRLSIIPQDPMLFQG-TVRTNLDPLE---------------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDG 1342 (1458)
Q Consensus 1279 ~~LR~~i~iIpQdp~LF~g-TIR~NLdp~~---------------~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1342 (1458)
..+|++++|+||++.+|.+ |+++|+.... ...++++.++++..++.+.... ..
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~ 150 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQ-----------RV 150 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhC-----------Cc
Confidence 5678899999999998875 9999996311 1113456778888877654322 23
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhh-hcCEEEEEeCCE
Q 000504 1343 ENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVI-DNDLVLVLDEGK 1419 (1458)
Q Consensus 1343 ~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ 1419 (1458)
..||+|||||++||||++.+|++|||||||++||.++.+.+.+.|++.. .++|||+|+|+++.+. .||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~ 230 (262)
T PRK09984 151 STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGH 230 (262)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 4699999999999999999999999999999999999999999999864 3789999999999875 499999999999
Q ss_pred EEEecChhHHhhcCCChHHHHHHH
Q 000504 1420 VLEYDSPRQLLEDNSSSFSKLVAE 1443 (1458)
Q Consensus 1420 ivE~g~p~~Ll~~~~s~F~~l~~~ 1443 (1458)
+++.|+|+++ . +....+++.+
T Consensus 231 i~~~g~~~~~-~--~~~~~~~~~~ 251 (262)
T PRK09984 231 VFYDGSSQQF-D--NERFDHLYRS 251 (262)
T ss_pred EEEeCCHHHh-c--cHHHHHHHhh
Confidence 9999999996 2 2345555443
No 308
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-37 Score=350.19 Aligned_cols=201 Identities=23% Similarity=0.287 Sum_probs=173.2
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 4599999999999999999999999999999999999999999999999998642 346899
Q ss_pred EccCCCCcc-ccHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQ-GTVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~-gTIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
+||+|.+|. .|+++|+... .... ++++.++++..++.+.... ...+||||||||++|||||
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrl~laral 143 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKR-----------YIWQLSGGQRQRVGIARAL 143 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhC-----------ChhhCCHHHHHHHHHHHHH
Confidence 999999887 5999999642 1122 2356778888887654432 2357999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEe--CCEEEEecCh
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLD--EGKVLEYDSP 1426 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~--~G~ivE~g~p 1426 (1458)
+++|++|+|||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||+|++|+ +|++++.+++
T Consensus 144 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 144 AANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999999999998863 37999999999999865 99999998 5999998764
No 309
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-37 Score=353.89 Aligned_cols=204 Identities=30% Similarity=0.406 Sum_probs=172.1
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE--------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1458)
.|+++|++.+|.+. . .+++ |++|++||+++++|||||||||||++|+|+.+|++|++ .++|+
T Consensus 3 ~i~l~~v~K~yg~~-------~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I-~i~g~~vt~l~P~ 73 (338)
T COG3839 3 ELELKNVRKSFGSF-------E-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEI-LIDGRDVTDLPPE 73 (338)
T ss_pred EEEEeeeEEEcCCc-------e-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEECCCCChh
Confidence 58999999999753 2 8999 99999999999999999999999999999999999997 78774
Q ss_pred ---EEEEcCCCCC-CCCcHHHHHhcCCCCC-------HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 661 ---KAYVPQSSWI-QTGTIRENILFGKDMR-------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 661 ---~ayv~Q~~~i-~~~Ti~enI~fg~~~~-------~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
+|+|+|+.-+ +..||+|||.||.... +.+.+++.+...+++-++ .+..+|||||||||
T Consensus 74 ~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~-----------r~P~~LSGGQrQRV 142 (338)
T COG3839 74 KRGIAMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLN-----------RKPLQLSGGQRQRV 142 (338)
T ss_pred HCCEEEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHh-----------cCcccCChhhHHHH
Confidence 6999999877 4679999999997654 345555666666665544 45679999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhc-cCCEEEEEeCCeEEEcccchhhh
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYEDLI 807 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~ 807 (1458)
|||||+.++|+++|||||+|+||++.+..+-.++.+-.. -+.|+|+||||..++- -+|+|.+|++|+|.+.|++.|+.
T Consensus 143 AlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely 222 (338)
T COG3839 143 ALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELY 222 (338)
T ss_pred HHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHh
Confidence 999999999999999999999999998777655433222 3789999999998865 59999999999999999999998
Q ss_pred hhcchH
Q 000504 808 ADQNSE 813 (1458)
Q Consensus 808 ~~~~~~ 813 (1458)
..+...
T Consensus 223 ~~P~n~ 228 (338)
T COG3839 223 ERPANL 228 (338)
T ss_pred hCccch
Confidence 744433
No 310
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=9.9e-37 Score=350.79 Aligned_cols=224 Identities=23% Similarity=0.370 Sum_probs=183.7
Q ss_pred cEEEEeeeEEeCCC-------CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH
Q 000504 1207 KIELENLLVQYNPT-------LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~-------~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~ 1279 (1458)
.|+++||+++|+.+ ..++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38999999999741 24699999999999999999999999999999999999999999999999999887653
Q ss_pred ---HHhcceEEEccCCC--Cc-cccHHHhcCc-C---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCC
Q 000504 1280 ---DLRSRLSIIPQDPM--LF-QGTVRTNLDP-L---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENW 1345 (1458)
Q Consensus 1280 ---~LR~~i~iIpQdp~--LF-~gTIR~NLdp-~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1345 (1458)
.+|++++|+||+|. ++ ..|+++|+.. . ...+ .+.+.+.++..++.. .........|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~L 152 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDD----------SVLDKRPPQL 152 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCCh----------hHhhCCCccC
Confidence 47889999999983 44 3599999742 1 1111 123445555554421 1223345679
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000504 1346 SVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLE 1422 (1458)
Q Consensus 1346 SgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE 1422 (1458)
|+|||||++|||||+++|+||||||||++||.++...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++
T Consensus 153 S~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~ 232 (268)
T PRK10419 153 SGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVE 232 (268)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEee
Confidence 99999999999999999999999999999999999999999987643 7899999999999975 99999999999999
Q ss_pred ecChhHHhhcCCChHHHHH
Q 000504 1423 YDSPRQLLEDNSSSFSKLV 1441 (1458)
Q Consensus 1423 ~g~p~~Ll~~~~s~F~~l~ 1441 (1458)
.|+++++.. .++.+..-+
T Consensus 233 ~g~~~~~~~-~~~~~~~~~ 250 (268)
T PRK10419 233 TQPVGDKLT-FSSPAGRVL 250 (268)
T ss_pred eCChhhccC-CCCHHHHHH
Confidence 999999885 455554333
No 311
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-37 Score=328.87 Aligned_cols=171 Identities=44% Similarity=0.745 Sum_probs=161.7
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+...+.+++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 57899999997543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000504 1288 IPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILV 1367 (1458)
Q Consensus 1288 IpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILl 1367 (1458)
+||+|.+|++|+++|+ ||+|||||++||||++++|++|+
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~lll 119 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPILI 119 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999997 99999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCE
Q 000504 1368 LDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGK 1419 (1458)
Q Consensus 1368 LDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ 1419 (1458)
|||||++||+.+...+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 120 lDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 120 LDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999998767799999999999998899999999985
No 312
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.4e-36 Score=340.64 Aligned_cols=204 Identities=26% Similarity=0.399 Sum_probs=178.2
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ++.+++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 478999999964 35999999999999999999999999999999999999999999999999876422 357999
Q ss_pred EccCCCCcc-ccHHHhcCcC---CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCC
Q 000504 1288 IPQDPMLFQ-GTVRTNLDPL---EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1363 (1458)
Q Consensus 1288 IpQdp~LF~-gTIR~NLdp~---~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1363 (1458)
+||++.+|. .|+++|+... ....++++.++++..++.+..... ..+||+|||||++||||++++|
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~~rv~laral~~~p 143 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKKK-----------AKQFSLGMKQRLGIAIALLNHP 143 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 999998886 5999998632 234567788899999887654332 2469999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhH
Q 000504 1364 RILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1364 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
++|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|++.+
T Consensus 144 ~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 144 KLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999998764 4689999999999985 499999999999999999865
No 313
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=4.9e-37 Score=343.55 Aligned_cols=202 Identities=23% Similarity=0.320 Sum_probs=175.6
Q ss_pred EEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH---HHh
Q 000504 1208 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ---DLR 1282 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~---~LR 1282 (1458)
++++|++++|+++. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996532 4699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cceEEEccCCCCcc-ccHHHhcCcCC----CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000504 1283 SRLSIIPQDPMLFQ-GTVRTNLDPLE----QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1353 (1458)
Q Consensus 1283 ~~i~iIpQdp~LF~-gTIR~NLdp~~----~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1353 (1458)
+.++|+||+|.+|. .|+.+|+.... ..+. +++.++++++++.+.....| .+||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP-----------HNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHH
Confidence 89999999999987 69999997421 2222 34667778888766655443 46999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhhcCEEEEEeCCEE
Q 000504 1354 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVIDNDLVLVLDEGKV 1420 (1458)
Q Consensus 1354 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~~DrVlvL~~G~i 1420 (1458)
+||||++++|++|+|||||++||+++.+.+.+.|++..+ ++|||+|+|+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999988653 7999999999997777999999999986
No 314
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.5e-37 Score=325.88 Aligned_cols=215 Identities=26% Similarity=0.442 Sum_probs=184.0
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH-Hhcce
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i 1285 (1458)
-++++|++..|.+ -.+|+||||++++||.++++||||+|||||+++|+|+.+|.+|+|.++|.||...+.|+ .|..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 3689999999976 35999999999999999999999999999999999999999999999999999999987 68899
Q ss_pred EEEccCCCCccc-cHHHhcCcCCC-CCH-----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPLEQ-HSD-----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~~~-~sd-----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
+||||...+|.. ||.|||..... ..+ ..+.++.+. .| -|.......+.+|||||+|-++||||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~l---------FP-~Lker~~~~aG~LSGGEQQMLAiaRA 150 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQERDLEEVYEL---------FP-RLKERRNQRAGTLSGGEQQMLAIARA 150 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccccHHHHHHH---------Ch-hHHHHhcCcccCCChHHHHHHHHHHH
Confidence 999999999976 99999974311 111 112223222 22 12333445567899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1433 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~ 1433 (1458)
|+.+||+|+|||||.+|-|.--+.|.++|++..+ +.||+.|-++.....+ +||.+||++|+|+..|++++|++++
T Consensus 151 Lm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 151 LMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred HhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 9999999999999999999999999999998764 4599999999998764 9999999999999999999999765
No 315
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=3.2e-36 Score=342.14 Aligned_cols=176 Identities=27% Similarity=0.413 Sum_probs=131.2
Q ss_pred EeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCC-CCccccHHHhcCcCC--
Q 000504 1231 TFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDP-MLFQGTVRTNLDPLE-- 1307 (1458)
Q Consensus 1231 ~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp-~LF~gTIR~NLdp~~-- 1307 (1458)
+|..||.+||+||||-||||++++|.|.++|++|+ ..++ +++|=||-- .-|+|||++-|.--.
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~~----------~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EEDL----------KVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Cccc----------eEeecceeecCCCCCcHHHHHHHhhhh
Confidence 45668899999999999999999999999999998 2222 689999952 238999998874211
Q ss_pred CCCHHHHH-HHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHH
Q 000504 1308 QHSDQEIW-EVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQT 1386 (1458)
Q Consensus 1308 ~~sdeeI~-~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~ 1386 (1458)
.+.+.-.+ +..+-.+|.+ -+|.+| .+|||||.||+++|-||.|++++.+||||+|.||.+-.-.+-++
T Consensus 429 ~~~~s~~~~ei~~pl~l~~-------i~e~~v----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakv 497 (591)
T COG1245 429 AFGSSYFKTEIVKPLNLED-------LLERPV----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKV 497 (591)
T ss_pred hcccchhHHhhcCccchHH-------HHhccc----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHH
Confidence 12222111 1222223322 234445 46999999999999999999999999999999999999999999
Q ss_pred HHHh--cCCcEEEEEecChhhhhh-cCEEEEEeC--CEEEEecChhHHhh
Q 000504 1387 IREE--TSRCTVITVAHRIPTVID-NDLVLVLDE--GKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1387 I~~~--~~~~TVI~IAHrl~ti~~-~DrVlvL~~--G~ivE~g~p~~Ll~ 1431 (1458)
||+. ..++|.++|-|++-.+.- +||++|.+. |+=-....|..+.+
T Consensus 498 IRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~GePg~~g~a~~P~~mr~ 547 (591)
T COG1245 498 IRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEGEPGKHGHASPPMSMRE 547 (591)
T ss_pred HHHHHhhcCceEEEEecceehhhhhhceEEEEecCCCccCcCCCCccHHH
Confidence 9874 357899999999988754 999999963 22222345666654
No 316
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-36 Score=336.76 Aligned_cols=200 Identities=54% Similarity=0.981 Sum_probs=180.3
Q ss_pred EEEeeeEEEeCCcccccCCC--cccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCEEEEEcCC
Q 000504 591 IDIEAGEYAWDAREENFKKP--TIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGKKAYVPQS 667 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~--~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~~ayv~Q~ 667 (1458)
++++|++++|+.. .. .+.+++ ||++++|++++|+||||||||||+++|+|+.+|++|++ .++|.++|++|+
T Consensus 1 l~~~~l~~~~~~~-----~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i-~~~g~i~~~~q~ 74 (204)
T cd03250 1 ISVEDASFTWDSG-----EQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSV-SVPGSIAYVSQE 74 (204)
T ss_pred CEEeEEEEecCCC-----CccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeE-EEcCEEEEEecC
Confidence 4689999999643 10 368999 99999999999999999999999999999999999997 899999999999
Q ss_pred CCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCC
Q 000504 668 SWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDP 747 (1458)
Q Consensus 668 ~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep 747 (1458)
|.+++.|++||+.++.++++++..++.+.+++.+.+..+|.|..+.+++++.+||||||||++||||++++|+++|||||
T Consensus 75 ~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP 154 (204)
T cd03250 75 PWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDP 154 (204)
T ss_pred chhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 99999999999999877766677778888899889999999999999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhccCCEEEEEeCCe
Q 000504 748 FSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGK 796 (1458)
Q Consensus 748 ~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~ 796 (1458)
|++||++..+.+++.++.... +++|+|++||+++.+..||++++|++|+
T Consensus 155 ~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 155 LSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred cccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999998888876665443 4789999999999988899999999985
No 317
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-37 Score=337.77 Aligned_cols=216 Identities=25% Similarity=0.394 Sum_probs=189.4
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCe---eCCCCCHHHHhc
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGV---DISMIGLQDLRS 1283 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~---dI~~i~l~~LR~ 1283 (1458)
.|+++|++.+|+. -.+++|||++|+.||.+|+.||||||||||+++|.|+..|++|+|.+||. |.++. +.-.+
T Consensus 2 ~i~i~~~~~~~~~--~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~--~~~~R 77 (345)
T COG1118 2 SIRINNVKKRFGA--FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNL--AVRDR 77 (345)
T ss_pred ceeehhhhhhccc--ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhcc--chhhc
Confidence 3778888888864 35899999999999999999999999999999999999999999999999 77763 33446
Q ss_pred ceEEEccCCCCccc-cHHHhcCcCC---------CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000504 1284 RLSIIPQDPMLFQG-TVRTNLDPLE---------QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1353 (1458)
Q Consensus 1284 ~i~iIpQdp~LF~g-TIR~NLdp~~---------~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1353 (1458)
+||+|.|+..||.. ||++|+.+.- ...+..+.+.|+.|+|...-.+-| ..||||||||+
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRV 146 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRV 146 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHH
Confidence 89999999999976 9999997542 123455777889999887766655 46899999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1354 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1354 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
+|||||.-.|++|+||||.++||..-...+++-|++.. -++|++.|||+.+.+.. ||||+||++|+|...|+|+|..
T Consensus 147 ALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 147 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 99999999999999999999999999999999988754 37899999999998865 9999999999999999999999
Q ss_pred hcCCChH
Q 000504 1431 EDNSSSF 1437 (1458)
Q Consensus 1431 ~~~~s~F 1437 (1458)
..+++.|
T Consensus 227 ~~P~s~f 233 (345)
T COG1118 227 DHPASRF 233 (345)
T ss_pred cCCCccc
Confidence 9999887
No 318
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=9.8e-37 Score=363.50 Aligned_cols=212 Identities=24% Similarity=0.373 Sum_probs=181.2
Q ss_pred eeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC----HHHHhcceEE
Q 000504 1212 NLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG----LQDLRSRLSI 1287 (1458)
Q Consensus 1212 nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~----l~~LR~~i~i 1287 (1458)
|++++|... .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|++++|
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 889999642 35 999999999999999999999999999999999999999999999987542 3456889999
Q ss_pred EccCCCCccc-cHHHhcCcC-CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhcc
Q 000504 1288 IPQDPMLFQG-TVRTNLDPL-EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~-~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1361 (1458)
+||+|.+|.+ |+++|+... .... ++++.+.++..++.+...+. ...||||||||++|||||++
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGqkqRvalAraL~~ 148 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLGRL-----------PGRLSGGEKQRVAIGRALLS 148 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhcCC-----------hhhCCHHHHHHHHHHHHHHc
Confidence 9999999986 999999742 1111 23467778888776544332 24699999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHH
Q 000504 1362 KKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFS 1438 (1458)
Q Consensus 1362 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~ 1438 (1458)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++...|.
T Consensus 149 ~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~ 228 (354)
T TIGR02142 149 SPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPWL 228 (354)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCcccc
Confidence 9999999999999999999999999988643 6899999999999876 999999999999999999999987765553
No 319
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-37 Score=337.88 Aligned_cols=203 Identities=33% Similarity=0.458 Sum_probs=168.0
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE---------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--------- 660 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--------- 660 (1458)
|.+++.+-.|+. .+.++| +++|+.||.+|+.|||||||||||++|+|+..|++|.+ .++|+
T Consensus 3 i~i~~~~~~~~~--------~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I-~~~~~~l~D~~~~~ 73 (345)
T COG1118 3 IRINNVKKRFGA--------FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRI-RLNGRVLFDVSNLA 73 (345)
T ss_pred eeehhhhhhccc--------ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceE-EECCEeccchhccc
Confidence 566777766753 366778 99999999999999999999999999999999999986 77775
Q ss_pred -----EEEEcCCCCCC-CCcHHHHHhcCCCCC---------HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 661 -----KAYVPQSSWIQ-TGTIRENILFGKDMR---------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 661 -----~ayv~Q~~~i~-~~Ti~enI~fg~~~~---------~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
||||+|+.-+| ..||.|||.||.+.. +.+.++.++.|.|+.--+ .....|||||
T Consensus 74 ~~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~-----------ryP~QLSGGQ 142 (345)
T COG1118 74 VRDRKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLAD-----------RYPAQLSGGQ 142 (345)
T ss_pred hhhcceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhh-----------cCchhcChHH
Confidence 69999997765 679999999997432 344555666676654322 4567999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchh-ccCCEEEEEeCCeEEEccc
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFL-DAADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l-~~~D~i~~l~~G~i~~~g~ 802 (1458)
||||||||||..+|+++||||||+|||++..+.+-. .+.... + +.|+++||||.++. +.||+|++|++|+|.+.|+
T Consensus 143 rQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~-wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~ 221 (345)
T COG1118 143 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRR-WLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGP 221 (345)
T ss_pred HHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHH-HHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCC
Confidence 999999999999999999999999999999877644 444433 3 78999999999986 4599999999999999999
Q ss_pred chhhhhhcchHH
Q 000504 803 YEDLIADQNSEL 814 (1458)
Q Consensus 803 ~~~l~~~~~~~~ 814 (1458)
++|+...++..|
T Consensus 222 p~ev~~~P~s~f 233 (345)
T COG1118 222 PDEVYDHPASRF 233 (345)
T ss_pred HHHHhcCCCccc
Confidence 999987555544
No 320
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.9e-36 Score=341.38 Aligned_cols=210 Identities=30% Similarity=0.454 Sum_probs=180.9
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|+++.|+.. ..+.+++ ||++++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 1 i~~~~l~~~~~~~------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 73 (237)
T cd03252 1 ITFEHVRFRYKPD------GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRV-LVDGHDLALADPAW 73 (237)
T ss_pred CEEEEEEEecCCC------CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEE-EECCeehHhcCHHH
Confidence 4688999999642 2468999 99999999999999999999999999999999999986 6766
Q ss_pred ---EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHH
Q 000504 660 ---KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1458)
Q Consensus 660 ---~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 735 (1458)
.++|++|++++++.|++||+.++.. .......+.++...+.+.++.++.|..+..+.++.+|||||||||+||||+
T Consensus 74 ~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral 153 (237)
T cd03252 74 LRRQVGVVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARAL 153 (237)
T ss_pred HhhcEEEEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHH
Confidence 3799999999998999999998653 233344444555666666777887877778889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhh
Q 000504 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
+.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++..||+|++|++|++++.|+.+++..
T Consensus 154 ~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 225 (237)
T cd03252 154 IHNPRILIFDEATSALDYESEHAIMR-NMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLA 225 (237)
T ss_pred hhCCCEEEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999887765 4555556899999999999997899999999999999999988876
No 321
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=3.4e-36 Score=344.10 Aligned_cols=222 Identities=20% Similarity=0.346 Sum_probs=181.9
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCee-----CCCCCHHH-
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVD-----ISMIGLQD- 1280 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~d-----I~~i~l~~- 1280 (1458)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +..++..+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 4899999999964 358999999999999999999999999999999999999999999999988 77666543
Q ss_pred ---HhcceEEEccCCC--C-ccccHHHhcC----cCCC----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCC
Q 000504 1281 ---LRSRLSIIPQDPM--L-FQGTVRTNLD----PLEQ----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWS 1346 (1458)
Q Consensus 1281 ---LR~~i~iIpQdp~--L-F~gTIR~NLd----p~~~----~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1346 (1458)
+|+.++++||+|. + +..|+.+|+. .+.. ..++++.+.++..++.+ +.......+||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----------~~~~~~~~~LS 150 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDP----------TRIDDLPRAFS 150 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCCh----------hhhhcCchhcC
Confidence 3467999999985 2 3457888863 1111 12344555566555531 12233456799
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000504 1347 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1423 (1458)
Q Consensus 1347 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~ 1423 (1458)
||||||++|||||+++|++|+|||||++||+.+.+.+.+.|++.. .+.|+|+|+|+++.+.. ||++++|++|++++.
T Consensus 151 gG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~ 230 (253)
T TIGR02323 151 GGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVES 230 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEE
Confidence 999999999999999999999999999999999999999998754 37899999999999985 999999999999999
Q ss_pred cChhHHhhcCCChHHHH
Q 000504 1424 DSPRQLLEDNSSSFSKL 1440 (1458)
Q Consensus 1424 g~p~~Ll~~~~s~F~~l 1440 (1458)
|+++++..++...|.++
T Consensus 231 ~~~~~~~~~~~~~~~~~ 247 (253)
T TIGR02323 231 GLTDQVLDDPQHPYTQL 247 (253)
T ss_pred CCHHHHhcCCCCHHHHH
Confidence 99999987655555443
No 322
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-36 Score=326.94 Aligned_cols=170 Identities=31% Similarity=0.532 Sum_probs=157.4
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
++++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ .++|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGK--KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 478999999964 25999999999999999999999999999999999999999999999999998765 678899999
Q ss_pred EccCCCCccc-cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEE
Q 000504 1288 IPQDPMLFQG-TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRIL 1366 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1366 (1458)
+||+|.+|.+ |+++|+. ||+|||||++|||||+++|+||
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999999987 9999973 9999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-hcCEEEEEeCCEE
Q 000504 1367 VLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI-DNDLVLVLDEGKV 1420 (1458)
Q Consensus 1367 lLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~-~~DrVlvL~~G~i 1420 (1458)
+|||||++||..+...+.+.|++.. ++.|+|+++|+.+.+. .||++++|++|++
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999999999999999999864 3589999999999887 4999999999974
No 323
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-36 Score=327.15 Aligned_cols=172 Identities=35% Similarity=0.530 Sum_probs=159.1
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC--HHHHhcce
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIG--LQDLRSRL 1285 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~--l~~LR~~i 1285 (1458)
|+++|++++|+. .++++|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 45999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEccCCCCccc-cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCC
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1364 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1364 (1458)
+|+||+|.+|.+ |+++|+... ||+|||||++||||++++|+
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p~ 120 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDPD 120 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCCC
Confidence 999999998865 999998643 99999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCE
Q 000504 1365 ILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGK 1419 (1458)
Q Consensus 1365 ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ 1419 (1458)
+++|||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 121 llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 121 VLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999987654 5899999999999985 99999999985
No 324
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=3.9e-36 Score=341.90 Aligned_cols=208 Identities=27% Similarity=0.431 Sum_probs=179.7
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 4899999999964 3599999999999999999999999999999999999999999999987 34799
Q ss_pred EEccCCCCcc---ccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCC
Q 000504 1287 IIPQDPMLFQ---GTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1363 (1458)
Q Consensus 1287 iIpQdp~LF~---gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1363 (1458)
|+||+|.++. .|+++|+......+++++.++++.+++.+.... . ...||+|||||++||||++++|
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-------~----~~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLIDA-------P----MQKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHHHhC-------C----hhhCCHHHHHHHHHHHHHhcCC
Confidence 9999998765 388998754334567788999999998766533 2 2469999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHHH
Q 000504 1364 RILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKL 1440 (1458)
Q Consensus 1364 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~l 1440 (1458)
++|+|||||++||+.+...+.+.|++..+ ++|||+|||+++.+.. ||+|++|++ ++++.|+++++.+ +..|.++
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~--~~~~~~~ 216 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSL--HPEFISM 216 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhC--CHHHHHH
Confidence 99999999999999999999999987643 7899999999999865 999999965 7999999999874 3345555
Q ss_pred H
Q 000504 1441 V 1441 (1458)
Q Consensus 1441 ~ 1441 (1458)
+
T Consensus 217 ~ 217 (251)
T PRK09544 217 F 217 (251)
T ss_pred h
Confidence 4
No 325
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=2.5e-36 Score=332.55 Aligned_cols=185 Identities=24% Similarity=0.353 Sum_probs=163.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcc--CCCCCcEEEEcCeeCCCCCHHHH-hcc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRV--VEPSGGRILIDGVDISMIGLQDL-RSR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl--~~p~~G~I~IDG~dI~~i~l~~L-R~~ 1284 (1458)
++++|++++|+. .++++|+||++++||.+||+|+||||||||+++|.|+ ++|++|+|.+||.++...+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999963 3599999999999999999999999999999999999 58999999999999998876654 567
Q ss_pred eEEEccCCCCccc-cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCC
Q 000504 1285 LSIIPQDPMLFQG-TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1363 (1458)
Q Consensus 1285 i~iIpQdp~LF~g-TIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1363 (1458)
++|+||+|.+|.+ |+++|++ . ...+||+|||||++||||++++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~------------------------~-----------~~~~LS~G~~qrv~laral~~~p 123 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR------------------------Y-----------VNEGFSGGEKKRNEILQLLLLEP 123 (200)
T ss_pred EEEeecChhhccCccHHHHHh------------------------h-----------ccccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999886 5665550 0 11369999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh--hcCEEEEEeCCEEEEecChhHHh
Q 000504 1364 RILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI--DNDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1364 ~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~--~~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
+||+|||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||++++|++|++++.| +.++.
T Consensus 124 ~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 124 DLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 9999999999999999999999998764 3789999999999988 59999999999999999 56665
No 326
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-37 Score=318.84 Aligned_cols=204 Identities=24% Similarity=0.361 Sum_probs=169.9
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCC-----CcEEEECC---
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRIS-----GAAIKVHG--- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~-----G~~i~~~g--- 659 (1458)
..++++|.++.|.. ...|++ |+.|++++++|++||+||||||||+++.+..+..+ |++ .++|
T Consensus 6 ~~~~~~~l~~yYg~--------~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v-~~~g~ni 76 (253)
T COG1117 6 PAIEVRDLNLYYGD--------KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEV-LLDGKNI 76 (253)
T ss_pred ceeEecceeEEECc--------hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEE-EECCeec
Confidence 46899999999974 368999 99999999999999999999999999999877665 554 4554
Q ss_pred ------------EEEEEcCCCCCCCCcHHHHHhcCCCCC---HHH----HHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 ------------KKAYVPQSSWIQTGTIRENILFGKDMR---QSF----YEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~enI~fg~~~~---~~~----y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
++|+|+|.|--|..||+|||.+|.... +.. .++.++..+|-+..+. .+.+.+..
T Consensus 77 ~~~~~d~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~ 149 (253)
T COG1117 77 YDPKVDVVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALG 149 (253)
T ss_pred cCCCCCHHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccC
Confidence 359999999999999999999996432 122 3334444444433321 24467788
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
|||||+||++||||+.-+|+|+|||||||||||-+..+| ++++..+.++-|||+|||+++...+ +|+...+.+|++++
T Consensus 150 LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kI-EeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE 228 (253)
T COG1117 150 LSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKI-EELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVE 228 (253)
T ss_pred CChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHH-HHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEE
Confidence 999999999999999999999999999999999988777 6678888888999999999998766 99999999999999
Q ss_pred cccchhhhhh
Q 000504 800 SGKYEDLIAD 809 (1458)
Q Consensus 800 ~g~~~~l~~~ 809 (1458)
.|+.+++...
T Consensus 229 ~g~T~~iF~~ 238 (253)
T COG1117 229 FGPTDKIFTN 238 (253)
T ss_pred EcCHHhhhcC
Confidence 9999988763
No 327
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=351.18 Aligned_cols=207 Identities=33% Similarity=0.427 Sum_probs=174.7
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE-------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK------- 660 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~------- 660 (1458)
..++++|++-+|.+ ...++| ||+|++||+++++|||||||||||++|+|..+|++|++ .++|+
T Consensus 4 ~~l~i~~v~k~yg~--------~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I-~l~G~~i~~lpp 74 (352)
T COG3842 4 PALEIRNVSKSFGD--------FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEI-LLDGEDITDVPP 74 (352)
T ss_pred ceEEEEeeeeecCC--------eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEECCCCCh
Confidence 46899999999973 478999 99999999999999999999999999999999999986 88884
Q ss_pred ----EEEEcCCCCCC-CCcHHHHHhcCCCCC-----H---HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHH
Q 000504 661 ----KAYVPQSSWIQ-TGTIRENILFGKDMR-----Q---SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1458)
Q Consensus 661 ----~ayv~Q~~~i~-~~Ti~enI~fg~~~~-----~---~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 727 (1458)
+++|+|+--+| +.||+|||.||.... + ++.+++++..+|..- -..+...|||||||
T Consensus 75 ~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~-----------~~R~p~qLSGGQqQ 143 (352)
T COG3842 75 EKRPIGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGF-----------ADRKPHQLSGGQQQ 143 (352)
T ss_pred hhcccceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhh-----------hhhChhhhChHHHH
Confidence 59999997775 679999999997722 2 245555555554432 23567899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccch-hccCCEEEEEeCCeEEEcccchh
Q 000504 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEF-LDAADLVLVMKDGKIEQSGKYED 805 (1458)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~-l~~~D~i~~l~~G~i~~~g~~~~ 805 (1458)
||||||||..+|+++|||||+||||.+-+.++-.++..... .|.|.|+||||.++ +..+|||.+|++|+|.+.|+++|
T Consensus 144 RVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~e 223 (352)
T COG3842 144 RVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEE 223 (352)
T ss_pred HHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHH
Confidence 99999999999999999999999999998888776554332 38999999999987 56799999999999999999999
Q ss_pred hhhhcchHHH
Q 000504 806 LIADQNSELV 815 (1458)
Q Consensus 806 l~~~~~~~~~ 815 (1458)
+...+...|.
T Consensus 224 iY~~P~~~fV 233 (352)
T COG3842 224 IYERPATRFV 233 (352)
T ss_pred HhhCcchHHH
Confidence 9876555543
No 328
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=314.28 Aligned_cols=214 Identities=28% Similarity=0.402 Sum_probs=186.5
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
+++.+++.+|.+ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|+|+|||+|+.+- +...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcce
Confidence 678999999976 23489999999999999999999999999999999999999999999999999884 5778999999
Q ss_pred EccCCCCccc-cHHHhcCcCC---CCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1288 IPQDPMLFQG-TVRTNLDPLE---QHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1288 IpQdp~LF~g-TIR~NLdp~~---~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
++-+.-++.. |.||||..|+ +.++. ++.+.-+..++.++. |..++ +||-|+|||++|||||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~-------~rRv~----~~S~G~kqkV~iARAl 148 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYL-------DRRVG----EFSTGMKQKVAIARAL 148 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHH-------HHHHh----hhchhhHHHHHHHHHH
Confidence 9976666654 9999998664 33333 455556666766664 44554 5999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC-CcEEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHHhhcCC
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREETS-RCTVITVAHRIPTVI-DNDLVLVLDEGKVLEYDSPRQLLEDNS 1434 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~-~~TVI~IAHrl~ti~-~~DrVlvL~~G~ivE~g~p~~Ll~~~~ 1434 (1458)
.++|+|++||||||+||..|.+.+++.|++... +++||.-+|.++.+. -||+|+++.+|+++..|+++++.++..
T Consensus 149 vh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~~ 225 (245)
T COG4555 149 VHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDARTV 225 (245)
T ss_pred hcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHHh
Confidence 999999999999999999999999999998764 899999999999998 599999999999999999999987543
No 329
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-36 Score=347.28 Aligned_cols=208 Identities=25% Similarity=0.376 Sum_probs=175.8
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHh-cce
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLR-SRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR-~~i 1285 (1458)
.|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. ..+ +++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~----~~~~~~i 80 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ----ALQKNLV 80 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH----hhccceE
Confidence 48999999999633 459999999999999999999999999999999999999999999999998752 233 469
Q ss_pred EEEccCCCC---ccccHHHhcCcC--------C---CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHH
Q 000504 1286 SIIPQDPML---FQGTVRTNLDPL--------E---QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1286 ~iIpQdp~L---F~gTIR~NLdp~--------~---~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1351 (1458)
+|+||+|.+ +..++++|+... . ...++.+.++++..++.+.. |+.+ .+|||||||
T Consensus 81 ~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~~~----~~LSgG~~q 149 (272)
T PRK15056 81 AYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFR-------HRQI----GELSGGQKK 149 (272)
T ss_pred EEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHh-------cCCc----ccCCHHHHH
Confidence 999999865 456889987521 0 11234567788888886543 3344 369999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1352 rl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
|++|||||+++|+||+|||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+++++ +|++++.|+++++
T Consensus 150 rv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~ 228 (272)
T PRK15056 150 RVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETT 228 (272)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhc
Confidence 9999999999999999999999999999999999998764 47899999999998854 9999777 8999999999998
Q ss_pred hh
Q 000504 1430 LE 1431 (1458)
Q Consensus 1430 l~ 1431 (1458)
.+
T Consensus 229 ~~ 230 (272)
T PRK15056 229 FT 230 (272)
T ss_pred cC
Confidence 64
No 330
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.9e-37 Score=319.66 Aligned_cols=215 Identities=25% Similarity=0.434 Sum_probs=184.2
Q ss_pred ccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH-Hhcc
Q 000504 1206 GKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSR 1284 (1458)
Q Consensus 1206 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~ 1284 (1458)
+.+..+|+..+|.. ..|.+|+||++++||.||+.||+|+||||.+..+.|++.|++|+|.+||.||+.++.+. -|-.
T Consensus 3 ~~L~a~~l~K~y~k--r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKK--RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCC--eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 45788999999975 46999999999999999999999999999999999999999999999999999999986 6778
Q ss_pred eEEEccCCCCccc-cHHHhcCcCCCCCH---------HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1285 LSIIPQDPMLFQG-TVRTNLDPLEQHSD---------QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1285 i~iIpQdp~LF~g-TIR~NLdp~~~~sd---------eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
|||+||||.+|.+ ||++||...-+..+ +++.+.|+..++... -...|..||||||+|+-
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hl-----------r~~~a~sLSGGERRR~E 149 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHL-----------RDSKAYSLSGGERRRVE 149 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHH-----------hcCcccccccchHHHHH
Confidence 9999999999988 99999964322211 223344444444332 22345689999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChh-hhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIP-TVIDNDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~-ti~~~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|||||..+|+.++||||.|++||-+-..||+.|+... ++--|++.-|... |+.-|||.+++.+|+|...|+|+++.+|
T Consensus 150 IARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 150 IARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred HHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 9999999999999999999999999999999998764 4667888889976 5566999999999999999999999987
Q ss_pred C
Q 000504 1433 N 1433 (1458)
Q Consensus 1433 ~ 1433 (1458)
+
T Consensus 230 ~ 230 (243)
T COG1137 230 E 230 (243)
T ss_pred h
Confidence 5
No 331
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-36 Score=337.90 Aligned_cols=228 Identities=25% Similarity=0.437 Sum_probs=185.9
Q ss_pred EEEEeeeEEeCCCC--CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC-C----CCcEEEEcCeeCCCCCHHH
Q 000504 1208 IELENLLVQYNPTL--PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE-P----SGGRILIDGVDISMIGLQD 1280 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~-p----~~G~I~IDG~dI~~i~l~~ 1280 (1458)
++++|+++.|..+. -.+++||||++++||.+||||.|||||||+.++++|+++ | .+|+|.+||.|+.+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 57899999997543 368999999999999999999999999999999999998 3 5799999999999999875
Q ss_pred Hh----cceEEEccCCCC-ccc--cHHHhc----CcCCCC-C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCC
Q 000504 1281 LR----SRLSIIPQDPML-FQG--TVRTNL----DPLEQH-S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGEN 1344 (1458)
Q Consensus 1281 LR----~~i~iIpQdp~L-F~g--TIR~NL----dp~~~~-s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1344 (1458)
+| +.|++|||||.- |+- ||.+-+ ...... + .+...+.|+.+++.+--+ .+..-...
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~--------~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPER--------RLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHH--------HHhhCCcc
Confidence 43 489999999841 221 333332 111111 1 235677888888764311 11223357
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000504 1345 WSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVL 1421 (1458)
Q Consensus 1345 LSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~iv 1421 (1458)
||||||||+.||-||+.+|++||-||||++||..+.++|.+.|++.. .++|+|+|||++..+.. ||||.||.+|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 99999999999999999999999999999999999999999998765 48999999999999866 9999999999999
Q ss_pred EecChhHHhhcCCChHHHHHHH
Q 000504 1422 EYDSPRQLLEDNSSSFSKLVAE 1443 (1458)
Q Consensus 1422 E~g~p~~Ll~~~~s~F~~l~~~ 1443 (1458)
|.|+.+++++++...|.+..-.
T Consensus 234 E~g~~~~i~~~P~HPYT~~Ll~ 255 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGLLN 255 (316)
T ss_pred EeCCHHHHhcCCCChHHHHHHH
Confidence 9999999999998888765443
No 332
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.5e-36 Score=341.01 Aligned_cols=203 Identities=23% Similarity=0.338 Sum_probs=168.7
Q ss_pred EEEEeeeEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC---CCCcEEEEcCeeCCCCCHHHHh
Q 000504 1208 IELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE---PSGGRILIDGVDISMIGLQDLR 1282 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~---p~~G~I~IDG~dI~~i~l~~LR 1282 (1458)
++|+||+++|... .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999765 3679999999999999999999999999999999999999 99999999999885 34678
Q ss_pred cceEEEccCCCCccc-cHHHhcCcC---C--CCCHH-----HHHH-HHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1283 SRLSIIPQDPMLFQG-TVRTNLDPL---E--QHSDQ-----EIWE-VINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1283 ~~i~iIpQdp~LF~g-TIR~NLdp~---~--~~sde-----eI~~-aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
++++|+||++.+|.+ |+++|+... . ...++ .+.+ .++..++.+ .......+||+|||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~ 149 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTR-----------IGGNLVKGISGGER 149 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchh-----------hhcccccCcCHHHH
Confidence 899999999999988 999999632 1 11111 1122 333333322 22233457999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCh-hhh-hhcCEEEEEeCCEEEEec
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRI-PTV-IDNDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl-~ti-~~~DrVlvL~~G~ivE~g 1424 (1458)
||++|||||+++|++|+|||||++||+.+...+.+.|++.. +++|+|+++|++ ..+ ..||+|++|++|++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999999998764 468999999998 355 559999999999999875
No 333
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-36 Score=335.51 Aligned_cols=200 Identities=23% Similarity=0.362 Sum_probs=169.7
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC----CHHHHhc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI----GLQDLRS 1283 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i----~l~~LR~ 1283 (1458)
+++ ||+++|+.. .+ |+||+|++ |++||+|+||||||||+++|.|+++|++|+|.+||.++... +....|+
T Consensus 2 ~~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 2 LCV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred cee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 355 899999753 24 99999999 99999999999999999999999999999999999998643 2345788
Q ss_pred ceEEEccCCCCccc-cHHHhcCcC-CCC----CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1284 RLSIIPQDPMLFQG-TVRTNLDPL-EQH----SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1284 ~i~iIpQdp~LF~g-TIR~NLdp~-~~~----sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
+++|+||++.+|.+ |+++|+... ..+ .++++.+.++..++.+... .....||+|||||++|||
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~ 144 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHLLN-----------RYPAQLSGGEKQRVALAR 144 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhHhh-----------cCcccCCHHHHHHHHHHH
Confidence 99999999999865 999999642 111 2345677777777755432 233579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
|++++|++|+|||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 145 ALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999987643 7899999999999865 9999999999998875
No 334
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.9e-36 Score=307.45 Aligned_cols=197 Identities=26% Similarity=0.403 Sum_probs=166.2
Q ss_pred EEEeeeEEEeCCcccccCCCcccccCcEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTDKMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK---------- 660 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~---------- 660 (1458)
+.+++++|+|+.. . +.-++.|++||++||+||+||||||||+.|+|...|.+|++ .++|.
T Consensus 2 l~L~~V~~~y~~~-------~--~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i-~i~g~d~t~~~P~~R 71 (231)
T COG3840 2 LALDDVRFSYGHL-------P--MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEI-LINGVDHTASPPAER 71 (231)
T ss_pred ccccceEEeeCcc-------e--EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceE-EEcCeecCcCCcccC
Confidence 4567888998743 1 11168899999999999999999999999999999999987 78774
Q ss_pred -EEEEcCCCCCCC-CcHHHHHhcCCC-------CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHH
Q 000504 661 -KAYVPQSSWIQT-GTIRENILFGKD-------MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQL 731 (1458)
Q Consensus 661 -~ayv~Q~~~i~~-~Ti~enI~fg~~-------~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 731 (1458)
+++++|+.-+|. .||++||-+|.. .++++.+.+....+|....+.+|. +|||||||||+|
T Consensus 72 PVSmlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvAL 140 (231)
T COG3840 72 PVSMLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVAL 140 (231)
T ss_pred ChhhhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHH
Confidence 699999999986 599999999963 234566667777777776666654 899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchhhhh
Q 000504 732 ARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 732 ARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
||++.++-+|+|||||||||||.-+..+.. ++..+. ++.|+++|||+++.+.. +|+++++++|+|.++|+.+++..
T Consensus 141 ARclvR~~PilLLDEPFsALdP~LR~eMl~-Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~ 219 (231)
T COG3840 141 ARCLVREQPILLLDEPFSALDPALRAEMLA-LVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLS 219 (231)
T ss_pred HHHHhccCCeEEecCchhhcCHHHHHHHHH-HHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhc
Confidence 999999999999999999999998877765 344333 47899999999999875 99999999999999999999876
Q ss_pred h
Q 000504 809 D 809 (1458)
Q Consensus 809 ~ 809 (1458)
.
T Consensus 220 ~ 220 (231)
T COG3840 220 G 220 (231)
T ss_pred c
Confidence 3
No 335
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-36 Score=331.33 Aligned_cols=190 Identities=25% Similarity=0.310 Sum_probs=161.7
Q ss_pred cEEEEeeeEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCC---CCCcEEEEcCeeCCCCCHHHH
Q 000504 1207 KIELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVE---PSGGRILIDGVDISMIGLQDL 1281 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~---p~~G~I~IDG~dI~~i~l~~L 1281 (1458)
.+.++||+|.|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.... ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 46899999999753 4579999999999999999999999999999999999999 89999999999998764 457
Q ss_pred hcceEEEccCCCCccc-cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhc
Q 000504 1282 RSRLSIIPQDPMLFQG-TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLL 1360 (1458)
Q Consensus 1282 R~~i~iIpQdp~LF~g-TIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1360 (1458)
|++++|+||++.+|.+ |+++|+...... . .+.. ...||+|||||++|||||+
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~--------------~~~~----~~~LS~Ge~qrl~laral~ 134 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K--------------GNEF----VRGISGGERKRVSIAEALV 134 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c--------------cccc----hhhCCHHHHHHHHHHHHHh
Confidence 8899999999988875 999999642110 0 2222 3469999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEe-cChhhh-hhcCEEEEEeCCEEEEec
Q 000504 1361 KKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVA-HRIPTV-IDNDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1361 r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IA-Hrl~ti-~~~DrVlvL~~G~ivE~g 1424 (1458)
++|++|+|||||++||+++.+.+.+.|++..+ ++|+|+++ |+.+.+ ..||+|++|++|++++.|
T Consensus 135 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 135 SRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999998643 46766655 555666 459999999999998765
No 336
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-36 Score=335.77 Aligned_cols=210 Identities=29% Similarity=0.467 Sum_probs=184.4
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+.. .+.+++ ||++++|++++|+||||||||||+++|+|+.+|++|++ .++|
T Consensus 2 ~l~~~~l~~~~~~~-------~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~ 73 (229)
T cd03254 2 EIEFENVNFSYDEK-------KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQI-LIDGIDIRDISRK 73 (229)
T ss_pred eEEEEEEEEecCCC-------CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEE-EECCEeHHHcCHH
Confidence 47899999999632 358999 99999999999999999999999999999999999986 6765
Q ss_pred ----EEEEEcCCCCCCCCcHHHHHhcCCCC-CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHH
Q 000504 660 ----KKAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARA 734 (1458)
Q Consensus 660 ----~~ayv~Q~~~i~~~Ti~enI~fg~~~-~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 734 (1458)
.++|++|+++++..|++||+.++.+. ...+.++.++.+++.+.++.+|.|..+..+....+|||||||||+||||
T Consensus 74 ~~~~~i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~a 153 (229)
T cd03254 74 SLRSMIGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARA 153 (229)
T ss_pred HHhhhEEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHH
Confidence 37999999999888999999987543 3455666777788888888888888888888999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhh
Q 000504 735 VYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 735 l~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
++++|+++||||||++||+.+.+.+.+ ++..+.+++|+|++||+++.++.||++++|++|++.+.|+++++..
T Consensus 154 l~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 154 MLRDPKILILDEATSNIDTETEKLIQE-ALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 999999999999999999999887765 5555556899999999999988899999999999999988877654
No 337
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=3.1e-36 Score=326.81 Aligned_cols=172 Identities=27% Similarity=0.481 Sum_probs=156.4
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCH-HHHhcce
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL-QDLRSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l-~~LR~~i 1285 (1458)
.|+++|++++| +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 8999999999999999999999999999999999999999999999999988874 4578899
Q ss_pred EEEccCC----CCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhcc
Q 000504 1286 SIIPQDP----MLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1286 ~iIpQdp----~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1361 (1458)
+|+||+| .++..|+++|+..... ||+|||||++||||+++
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~~ 121 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLAR 121 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHcc
Confidence 9999995 3445799999864210 99999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEE
Q 000504 1362 KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKV 1420 (1458)
Q Consensus 1362 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~i 1420 (1458)
+|++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 122 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 122 DPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999764 47899999999999977 999999999974
No 338
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.2e-35 Score=340.06 Aligned_cols=219 Identities=29% Similarity=0.364 Sum_probs=190.0
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1458)
..++++|++++|+.. ....+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 18 ~~i~~~~l~~~~~~~------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~i~g~~i~~~~~ 90 (257)
T cd03288 18 GEIKIHDLCVRYENN------LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKI-VIDGIDISKLPL 90 (257)
T ss_pred ceEEEEEEEEEeCCC------CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeE-EECCEEhhhCCH
Confidence 469999999999742 2458899 99999999999999999999999999999999999987 6665
Q ss_pred -----EEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHH
Q 000504 660 -----KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARA 734 (1458)
Q Consensus 660 -----~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 734 (1458)
.++|++|+|+++++|++||+........+.+.+.++..++.+.++.+|.|..+.+++.+.+||||||||++||||
T Consensus 91 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~lara 170 (257)
T cd03288 91 HTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARA 170 (257)
T ss_pred HHHhhhEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHH
Confidence 379999999999999999997664444556677777788888888999898899999999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhhhcchHH
Q 000504 735 VYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIADQNSEL 814 (1458)
Q Consensus 735 l~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~~~ 814 (1458)
++++|++++|||||++||+++...+++ ++..+.+++|+|++||+++.+..||+|++|++|++++.|+++++.+.....+
T Consensus 171 l~~~p~llllDEPt~gLD~~~~~~l~~-~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~ 249 (257)
T cd03288 171 FVRKSSILIMDEATASIDMATENILQK-VVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVF 249 (257)
T ss_pred HhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHH
Confidence 999999999999999999998766654 5555556899999999999988899999999999999999988876333333
Q ss_pred H
Q 000504 815 V 815 (1458)
Q Consensus 815 ~ 815 (1458)
.
T Consensus 250 ~ 250 (257)
T cd03288 250 A 250 (257)
T ss_pred H
Confidence 3
No 339
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=4.4e-36 Score=328.86 Aligned_cols=182 Identities=27% Similarity=0.402 Sum_probs=161.1
Q ss_pred cEEEEeeeEEeCCC----CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccC--CCCCcEEEEcCeeCCCCCHHH
Q 000504 1207 KIELENLLVQYNPT----LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV--EPSGGRILIDGVDISMIGLQD 1280 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~----~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~IDG~dI~~i~l~~ 1280 (1458)
.|+++||+++|+.. ..++|+|+||+|++||++||+|++|||||||+++|.|++ +|++|+|.+||.++.. .+
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 58999999999752 246999999999999999999999999999999999999 9999999999999875 36
Q ss_pred HhcceEEEccCCCCccc-cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHh
Q 000504 1281 LRSRLSIIPQDPMLFQG-TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVL 1359 (1458)
Q Consensus 1281 LR~~i~iIpQdp~LF~g-TIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1359 (1458)
.|++++++||+|.+|.+ |+++|+... . .. + .||+|||||++|||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~---------~---~~-------------~--------~LS~G~~qrv~laral 126 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFA---------A---KL-------------R--------GLSGGERKRVSIALEL 126 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHH---------H---Hh-------------c--------cCCHHHHHHHHHHHHH
Confidence 78899999999998875 999998421 0 00 0 6999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChh-hhh-hcCEEEEEeCCEEEEec
Q 000504 1360 LKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIP-TVI-DNDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1360 Lr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~-ti~-~~DrVlvL~~G~ivE~g 1424 (1458)
+++|++|+|||||++||..+.+.+.+.|++.. +++|+|+++|+++ .+. .||+|++|++|++++.|
T Consensus 127 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 127 VSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999864 4789999999997 454 49999999999998764
No 340
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.3e-36 Score=324.17 Aligned_cols=193 Identities=31% Similarity=0.406 Sum_probs=154.4
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++-.|.... .....|++ ||+|++||+++|+||+||||||||++|.|...|++|.+ .++|
T Consensus 2 i~~~~v~k~y~~~~----~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v-~i~g~d~~~l~~~~ 76 (226)
T COG1136 2 IELKNVSKIYGLGG----EKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEV-LINGKDLTKLSEKE 76 (226)
T ss_pred cEEeeeEEEeccCC----cceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceE-EECCEEcCcCCHHH
Confidence 45778777776431 22578999 99999999999999999999999999999999999986 7777
Q ss_pred -------EEEEEcCCCCC-CCCcHHHHHhcCCCCC-------HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChH
Q 000504 660 -------KKAYVPQSSWI-QTGTIRENILFGKDMR-------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1458)
Q Consensus 660 -------~~ayv~Q~~~i-~~~Ti~enI~fg~~~~-------~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGG 724 (1458)
.+|||+|+..+ ++.|++|||.+...+. .++.+..++..+|.+.. ...+..+||||
T Consensus 77 ~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~----------~~~~p~eLSGG 146 (226)
T COG1136 77 LAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRL----------LKKKPSELSGG 146 (226)
T ss_pred HHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhh----------ccCCchhcCHH
Confidence 26999999664 6789999999642221 22233333333333221 12457799999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhccCCEEEEEeCCeEE
Q 000504 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGKIE 798 (1458)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~i~ 798 (1458)
|||||||||||+.+|+++|.||||.+||.++++.+++.+..... .|+|+|+||||.+....|||++.|+||++.
T Consensus 147 qqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 147 QQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999999999999999875443333 388999999999999999999999999954
No 341
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=3.1e-36 Score=333.78 Aligned_cols=193 Identities=25% Similarity=0.361 Sum_probs=165.0
Q ss_pred EEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCH----HHHhcce
Q 000504 1210 LENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL----QDLRSRL 1285 (1458)
Q Consensus 1210 ~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l----~~LR~~i 1285 (1458)
++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4689999964 359999999999999999999999999999999999999999999999999775542 2467899
Q ss_pred EEEccCCCCcc-ccHHHhcCcC---CC----CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1286 SIIPQDPMLFQ-GTVRTNLDPL---EQ----HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1286 ~iIpQdp~LF~-gTIR~NLdp~---~~----~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
+|+||+|.+|. .|+++|+... .. ..++++.++++..++.+.. |..+ .+||+|||||++|||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~lS~G~~qr~~lar 147 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKL-------KQKI----YELSGGEQQRVALAR 147 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhh-------cCCh----hhCCHHHHHHHHHHH
Confidence 99999999997 5999999641 11 1244577788888875543 2333 469999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEE
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVL 1415 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~~DrVlvL 1415 (1458)
||+++|++|+|||||++||+++.+.+.+.|++.. ++.|+|+++|+++.+..||+|++|
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 148 AILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999999998864 378999999999988889999875
No 342
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.1e-35 Score=339.92 Aligned_cols=212 Identities=22% Similarity=0.280 Sum_probs=178.0
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhcc--CCCCCcEEEEcCeeCCCCCHHHHhc-
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRV--VEPSGGRILIDGVDISMIGLQDLRS- 1283 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl--~~p~~G~I~IDG~dI~~i~l~~LR~- 1283 (1458)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++..++.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4899999999964 3599999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ceEEEccCCCCccc-cHHHhcCcC-C------C---CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChh
Q 000504 1284 RLSIIPQDPMLFQG-TVRTNLDPL-E------Q---HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVG 1348 (1458)
Q Consensus 1284 ~i~iIpQdp~LF~g-TIR~NLdp~-~------~---~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1348 (1458)
.++++||+|.+|.+ |+++|+... . . .. .+++.++++.+++.+. .++..+. ..||||
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~~---~~LSgG 155 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPS------FLSRNVN---EGFSGG 155 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchh------hhccccc---cCCCHH
Confidence 58999999999987 789987531 1 0 01 1335566777776421 1233332 249999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh--cCEEEEEeCCEEEEecC
Q 000504 1349 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID--NDLVLVLDEGKVLEYDS 1425 (1458)
Q Consensus 1349 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~--~DrVlvL~~G~ivE~g~ 1425 (1458)
||||++|||||+++|+||||||||++||..+...+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+
T Consensus 156 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (252)
T CHL00131 156 EKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGD 235 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecC
Confidence 9999999999999999999999999999999999999998764 47899999999999875 89999999999999999
Q ss_pred hhHH
Q 000504 1426 PRQL 1429 (1458)
Q Consensus 1426 p~~L 1429 (1458)
|+.+
T Consensus 236 ~~~~ 239 (252)
T CHL00131 236 AELA 239 (252)
T ss_pred hhhh
Confidence 9843
No 343
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=5.4e-36 Score=324.35 Aligned_cols=177 Identities=32% Similarity=0.525 Sum_probs=160.6
Q ss_pred EEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEE
Q 000504 1209 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSII 1288 (1458)
Q Consensus 1209 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iI 1288 (1458)
+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 57899999964 4599999999999999999999999999999999999999999999999999988888889999999
Q ss_pred ccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000504 1289 PQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVL 1368 (1458)
Q Consensus 1289 pQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlL 1368 (1458)
|| +++.+++.+.... ...+||+|||||++||||++++|++++|
T Consensus 79 ~q--------------------------~l~~~gl~~~~~~-----------~~~~LS~G~~qrl~laral~~~p~llll 121 (180)
T cd03214 79 PQ--------------------------ALELLGLAHLADR-----------PFNELSGGERQRVLLARALAQEPPILLL 121 (180)
T ss_pred HH--------------------------HHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99 7788888765432 2357999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1369 DEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1369 DEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.+ ||++++|++|++++.|
T Consensus 122 DEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 122 DEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999987654 6899999999999854 9999999999998754
No 344
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.4e-35 Score=335.91 Aligned_cols=211 Identities=32% Similarity=0.476 Sum_probs=182.2
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|+++.|+.. ...+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 1 l~i~~l~~~~~~~-----~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~~~~~ 74 (238)
T cd03249 1 IEFKNVSFRYPSR-----PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEI-LLDGVDIRDLNLRW 74 (238)
T ss_pred CeEEEEEEecCCC-----CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEE-EECCEehhhcCHHH
Confidence 4688999999643 22468999 99999999999999999999999999999999999986 6766
Q ss_pred ---EEEEEcCCCCCCCCcHHHHHhcCCCC-CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHH
Q 000504 660 ---KKAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1458)
Q Consensus 660 ---~~ayv~Q~~~i~~~Ti~enI~fg~~~-~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 735 (1458)
.++|++|++.+++.|++||+.++... ..+..++.++.+.+.+.++.+|.|..+..+....+||||||||++||||+
T Consensus 75 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al 154 (238)
T cd03249 75 LRSQIGLVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARAL 154 (238)
T ss_pred HHhhEEEECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHH
Confidence 37999999998888999999987543 33445556677777777788888888888888999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhh
Q 000504 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
+.+|+++||||||++||+++...+.+ ++..+.+++|+|++||+++++..||+|++|++|++++.|+.+++..
T Consensus 155 ~~~p~llllDEP~~gLD~~~~~~l~~-~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (238)
T cd03249 155 LRNPKILLLDEATSALDAESEKLVQE-ALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA 226 (238)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh
Confidence 99999999999999999999877765 4554447899999999999988899999999999999998877765
No 345
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=7.3e-36 Score=318.71 Aligned_cols=164 Identities=34% Similarity=0.422 Sum_probs=150.6
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999643 45999999999999999999999999999999999999999999999983 68999
Q ss_pred EccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000504 1288 IPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILV 1367 (1458)
Q Consensus 1288 IpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILl 1367 (1458)
+||+|.++++|+++|+... ....||+|||||++||||++++|++|+
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~ll 114 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVF 114 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999998642 135799999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCCE
Q 000504 1368 LDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGK 1419 (1458)
Q Consensus 1368 LDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G~ 1419 (1458)
|||||++||.++.+.+.+.|++. ++|+|++||+++....||+|++|++|-
T Consensus 115 lDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 115 LDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred EECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 99999999999999999999986 589999999999888899999998864
No 346
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-35 Score=334.80 Aligned_cols=210 Identities=31% Similarity=0.490 Sum_probs=183.4
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|.+++|+.. ..+.+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 1 i~~~~l~~~~~~~------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~~ 73 (234)
T cd03251 1 VEFKNVTFRYPGD------GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRI-LIDGHDVRDYTLAS 73 (234)
T ss_pred CEEEEEEEEeCCC------CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEE-EECCEEhhhCCHHH
Confidence 4688999999642 2368899 99999999999999999999999999999999999987 6765
Q ss_pred ---EEEEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHH
Q 000504 660 ---KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1458)
Q Consensus 660 ---~~ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 735 (1458)
.++|++|+++++..|++||+.++.. .....+.+.++.+.+.+.++.++.|..+..+.+..+||||||||++||||+
T Consensus 74 ~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al 153 (234)
T cd03251 74 LRRQIGLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARAL 153 (234)
T ss_pred HHhhEEEeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHH
Confidence 2799999999988999999998754 344556666677778888888888877888889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhh
Q 000504 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
+.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+..||+|++|++|++.+.|+.+++..
T Consensus 154 ~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 225 (234)
T cd03251 154 LKDPPILILDEATSALDTESERLVQA-ALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLA 225 (234)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHH
Confidence 99999999999999999999777755 5666556899999999999988899999999999999999888765
No 347
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-36 Score=328.37 Aligned_cols=181 Identities=23% Similarity=0.320 Sum_probs=160.0
Q ss_pred cEEEEeeeEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccC--CCCCcEEEEcCeeCCCCCHHHHh
Q 000504 1207 KIELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV--EPSGGRILIDGVDISMIGLQDLR 1282 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~IDG~dI~~i~l~~LR 1282 (1458)
.|+++|++++|+++ ..++|+|+||++++||++||+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 48999999999642 246999999999999999999999999999999999986 489999999999886 5678
Q ss_pred cceEEEccCCCCccc-cHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhcc
Q 000504 1283 SRLSIIPQDPMLFQG-TVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1283 ~~i~iIpQdp~LF~g-TIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1361 (1458)
++++++||+|.+|.+ |+++|+... ..++ +||||||||++||||+++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~---------~~~~------------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFS---------ALLR------------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHH---------HHHh------------------------cCCHHHhHHHHHHHHHhc
Confidence 899999999988875 999998621 0000 699999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhh-h-hhcCEEEEEeC-CEEEEec
Q 000504 1362 KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPT-V-IDNDLVLVLDE-GKVLEYD 1424 (1458)
Q Consensus 1362 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~t-i-~~~DrVlvL~~-G~ivE~g 1424 (1458)
+|++|+|||||+++|.++...+.+.|++.. +++|+|+|+|+++. + ..||+|++|++ |++++.|
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999999764 47899999999984 4 56999999999 9999875
No 348
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=8.3e-36 Score=335.86 Aligned_cols=206 Identities=22% Similarity=0.346 Sum_probs=170.4
Q ss_pred ceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC----CCcEEEEcCeeCCCCCHHHHhcceEEEccCCC-Ccc--
Q 000504 1224 VLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP----SGGRILIDGVDISMIGLQDLRSRLSIIPQDPM-LFQ-- 1296 (1458)
Q Consensus 1224 vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p----~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~-LF~-- 1296 (1458)
+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... ...+++++|+||+|. .|.
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 58999999999999999999999999999999999999 899999999998754 223468999999995 343
Q ss_pred ccHHHhcCc----CCCC---CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000504 1297 GTVRTNLDP----LEQH---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLD 1369 (1458)
Q Consensus 1297 gTIR~NLdp----~~~~---sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLD 1369 (1458)
-|+.+|+.. .... .++++.++++.+++.+. +........+||+|||||++||||++++|+||+||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLD 150 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILEALEAVGLPDP--------EEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIAD 150 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCch--------HHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 488888631 1111 23457788888887521 01122234579999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 000504 1370 EATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSFSK 1439 (1458)
Q Consensus 1370 EaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F~~ 1439 (1458)
|||++||..+...+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++...+...|.+
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 151 EPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred CCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 99999999999999999998643 6899999999999965 9999999999999999999998766555554
No 349
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.3e-35 Score=330.40 Aligned_cols=205 Identities=29% Similarity=0.398 Sum_probs=182.0
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+.. ..+.+++ ||++++|++++|+|+||||||||+++|+|+.+|++|++ .++|
T Consensus 2 ~l~~~~l~~~~~~~------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~ 74 (221)
T cd03244 2 DIEFKNVSLRYRPN------LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSI-LIDGVDISKIGLH 74 (221)
T ss_pred cEEEEEEEEecCCC------CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEE-EECCEEhHhCCHH
Confidence 37899999999743 2468999 99999999999999999999999999999999999987 6665
Q ss_pred ----EEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHH
Q 000504 660 ----KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1458)
Q Consensus 660 ----~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 735 (1458)
.++|++|++.+++.|++||+.+......++..+.++..++.+.+..++.|..+..++.+.+||||||||++||||+
T Consensus 75 ~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral 154 (221)
T cd03244 75 DLRSRISIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARAL 154 (221)
T ss_pred HHhhhEEEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHH
Confidence 3799999999998999999987766666666777788888888888899999999999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEccc
Q 000504 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~ 802 (1458)
+.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++.+..||++++|++|++.+.|+
T Consensus 155 ~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 155 LRKSKILVLDEATASVDPETDALIQK-TIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999998777765 5555556789999999999998899999999999988765
No 350
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.5e-35 Score=337.34 Aligned_cols=205 Identities=23% Similarity=0.330 Sum_probs=174.9
Q ss_pred EEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEE
Q 000504 1209 ELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSII 1288 (1458)
Q Consensus 1209 ~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iI 1288 (1458)
+++||+++ .+|+|+||+|++||++||+|+||||||||+++|.|+++ .+|+|.+||.++...+...+|+.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhheEEe
Confidence 56778775 27999999999999999999999999999999999986 499999999999988888888899999
Q ss_pred ccCCC-CccccHHHhcCcCCC-C-C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhcc
Q 000504 1289 PQDPM-LFQGTVRTNLDPLEQ-H-S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1289 pQdp~-LF~gTIR~NLdp~~~-~-s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1361 (1458)
||+|. .+..|+++|+..... . + ++++.++++..++.+.. +.. ...||+|||||++|||||++
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LS~G~~qrv~la~al~~ 143 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAVASALNEVAEALGLDDKL-------GRS----VNQLSGGEWQRVRLAAVVLQ 143 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHHHHHHHHHHHHcCCHhHh-------cCC----cccCCHHHHHHHHHHHHHhc
Confidence 99985 456799999974321 1 1 23566777777775433 222 34699999999999999997
Q ss_pred -------CCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1362 -------KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1362 -------~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
+|++|+|||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 144 ~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 144 VWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred cccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 679999999999999999999999998764 47899999999997754 99999999999999999999874
No 351
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-35 Score=333.33 Aligned_cols=209 Identities=33% Similarity=0.531 Sum_probs=182.4
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE---------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--------- 660 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--------- 660 (1458)
++++|++++|+.+ .+.+++ |+++++|++++|+|+||||||||+++|+|+.+|++|++ .++|.
T Consensus 1 l~~~~l~~~~~~~-------~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v-~~~g~~~~~~~~~~ 72 (236)
T cd03253 1 IEFENVTFAYDPG-------RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSI-LIDGQDIREVTLDS 72 (236)
T ss_pred CEEEEEEEEeCCC-------CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEE-EECCEEhhhCCHHH
Confidence 4688999998632 357899 99999999999999999999999999999999999987 77662
Q ss_pred ----EEEEcCCCCCCCCcHHHHHhcCCCC-CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHH
Q 000504 661 ----KAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAV 735 (1458)
Q Consensus 661 ----~ayv~Q~~~i~~~Ti~enI~fg~~~-~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 735 (1458)
++|++|++++++.|++||+.++... ......+.++.+.+.+.++.++.|..+.++.+..+||||||||++||||+
T Consensus 73 ~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL 152 (236)
T cd03253 73 LRRAIGVVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAI 152 (236)
T ss_pred HHhhEEEECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHH
Confidence 7999999999999999999987542 33444566777788888888998988888889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhhh
Q 000504 736 YSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 736 ~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
+++|+++||||||++||+++...+.+ ++..+.+++|+|++||+++++..||++++|++|++.+.|+.+++..
T Consensus 153 ~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~ 224 (236)
T cd03253 153 LKNPPILLLDEATSALDTHTEREIQA-ALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA 224 (236)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999877765 4555545899999999999998899999999999999998887765
No 352
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-36 Score=330.59 Aligned_cols=199 Identities=32% Similarity=0.480 Sum_probs=170.8
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|.+|+|++. .+.+++ |+++++|+.++|+|+||||||||++++.|.++|++|.+ .++|
T Consensus 3 ~i~~~~l~~~y~~~-------~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v-~~~g~~~~~~~~~ 74 (235)
T COG1122 3 MIEAENLSFRYPGR-------KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEV-LVDGLDTSSEKSL 74 (235)
T ss_pred eEEEEEEEEEcCCC-------ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEE-EECCeeccchhhH
Confidence 47899999999753 578999 99999999999999999999999999999999999987 6665
Q ss_pred -----EEEEEcCCC--CCCCCcHHHHHhcCCCC---C----HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 -----KKAYVPQSS--WIQTGTIRENILFGKDM---R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 -----~~ayv~Q~~--~i~~~Ti~enI~fg~~~---~----~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
++|||+|+| .++..||.|.+.||... . +++.+++++.|++.+.. .....+|||||
T Consensus 75 ~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~-----------~r~p~~LSGGq 143 (235)
T COG1122 75 LELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELL-----------DRPPFNLSGGQ 143 (235)
T ss_pred HHhhcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhc-----------cCCccccCCcc
Confidence 379999999 46789999999999642 2 24455666777765543 24567999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhcc-CCEEEEEeCCeEEEccc
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~ 802 (1458)
||||+||.+|..+|++++||||||+||+...+.+.+. +..+. . ++|+|++|||++++.. ||++++|++|+++.+|+
T Consensus 144 kqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~-l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~ 222 (235)
T COG1122 144 KQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLEL-LKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGD 222 (235)
T ss_pred eeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHH-HHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCC
Confidence 9999999999999999999999999999998888764 44443 3 5899999999999875 99999999999999999
Q ss_pred chhhhh
Q 000504 803 YEDLIA 808 (1458)
Q Consensus 803 ~~~l~~ 808 (1458)
++++.+
T Consensus 223 p~~i~~ 228 (235)
T COG1122 223 PAEIFN 228 (235)
T ss_pred HHHHhh
Confidence 988876
No 353
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=351.08 Aligned_cols=201 Identities=27% Similarity=0.401 Sum_probs=167.5
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE--------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1458)
.++++|++++|+.+ .+.|++ ||++++||+++|+|||||||||||++|+|+.+|++|++ .++|.
T Consensus 3 ~l~i~~l~~~~~~~-------~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I-~~~g~~i~~~~~~ 74 (356)
T PRK11650 3 GLKLQAVRKSYDGK-------TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEI-WIGGRVVNELEPA 74 (356)
T ss_pred EEEEEeEEEEeCCC-------CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEE-EECCEECCCCCHH
Confidence 37899999999422 357999 99999999999999999999999999999999999987 77763
Q ss_pred ---EEEEcCCCCCC-CCcHHHHHhcCCCC---CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 661 ---KAYVPQSSWIQ-TGTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 661 ---~ayv~Q~~~i~-~~Ti~enI~fg~~~---~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
+|||+|++.++ +.||+|||.|+... .. ++.+++++..+|.+. .+....+|||||||||
T Consensus 75 ~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~QRv 143 (356)
T PRK11650 75 DRDIAMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPL-----------LDRKPRELSGGQRQRV 143 (356)
T ss_pred HCCEEEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhH-----------hhCChhhCCHHHHHHH
Confidence 79999999887 56999999998542 22 223344444444332 3355679999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhc-cCCEEEEEeCCeEEEcccchhh
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYEDL 806 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l 806 (1458)
+|||||+.+|+++|||||||+||+.+...+.+.+ +.+. + +.|+|+||||++++. .||+|++|++|++++.|+++++
T Consensus 144 alARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~ 222 (356)
T PRK11650 144 AMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEI-QRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEV 222 (356)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHH
Confidence 9999999999999999999999999988887654 4433 2 799999999999876 5999999999999999999998
Q ss_pred hhhc
Q 000504 807 IADQ 810 (1458)
Q Consensus 807 ~~~~ 810 (1458)
....
T Consensus 223 ~~~p 226 (356)
T PRK11650 223 YEKP 226 (356)
T ss_pred HhCC
Confidence 7643
No 354
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.4e-34 Score=373.34 Aligned_cols=216 Identities=22% Similarity=0.311 Sum_probs=145.1
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHh------ccCC----C-----------CCcE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALF------RVVE----P-----------SGGR 1265 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~------rl~~----p-----------~~G~ 1265 (1458)
.++++|++. ..|+|+|++|++||.+||+|+||||||||++-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 488999862 2599999999999999999999999999997332 1111 1 1113
Q ss_pred EEEcCeeCCC---------CC-HHHHhcceEEEcc------CCCCccc--------------cHHHhc--C-------c-
Q 000504 1266 ILIDGVDISM---------IG-LQDLRSRLSIIPQ------DPMLFQG--------------TVRTNL--D-------P- 1305 (1458)
Q Consensus 1266 I~IDG~dI~~---------i~-l~~LR~~i~iIpQ------dp~LF~g--------------TIR~NL--d-------p- 1305 (1458)
|.||-.+|.. .+ .+.+|.-.+=.|+ .|-.|+- .+.-++ + |
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 5555444432 12 2346666655554 2333421 111111 0 0
Q ss_pred --CCCCCHHH---------HHHHHHHc--CcHHHHHhcc-----------cccCc-cccCCCCCCChhHHHHHHHHHHhc
Q 000504 1306 --LEQHSDQE---------IWEVINKC--HLAEIVRQDQ-----------RLLDA-PVAEDGENWSVGQRQLVCLARVLL 1360 (1458)
Q Consensus 1306 --~~~~sdee---------I~~aL~~~--~L~~~i~~lp-----------~gLdt-~v~e~G~nLSgGQrQrl~LARALL 1360 (1458)
...+.+|- |-++|+.. ...+++..++ -||+. ..+.....|||||+||++|||+|+
T Consensus 765 C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~ 844 (924)
T TIGR00630 765 CKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELS 844 (924)
T ss_pred cCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHh
Confidence 01111211 11111110 0111222111 14543 356667789999999999999999
Q ss_pred c---CCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEE------eCCEEEEecChhHH
Q 000504 1361 K---KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVL------DEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1361 r---~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~~DrVlvL------~~G~ivE~g~p~~L 1429 (1458)
+ +|+++||||||++||+.+...+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|++++.|+|+++
T Consensus 845 ~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 845 KRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 7 489999999999999999999999998864 478999999999999899999999 79999999999886
No 355
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.8e-35 Score=327.61 Aligned_cols=204 Identities=33% Similarity=0.517 Sum_probs=177.9
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|.++.|+.. ..+.+++ ||++++|++++|+||||||||||+++|+|+.+|++|++ .++|
T Consensus 2 ~l~~~~l~~~~~~~------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~~~~ 74 (220)
T cd03245 2 RIEFRNVSFSYPNQ------EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSV-LLDGTDIRQLDPA 74 (220)
T ss_pred eEEEEEEEEEcCCC------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeE-EECCEEhHHCCHH
Confidence 37899999999642 2468999 99999999999999999999999999999999999986 6766
Q ss_pred ----EEEEEcCCCCCCCCcHHHHHhcCCCC-CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHH
Q 000504 660 ----KKAYVPQSSWIQTGTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARA 734 (1458)
Q Consensus 660 ----~~ayv~Q~~~i~~~Ti~enI~fg~~~-~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 734 (1458)
.++|++|+++++..|++||+.++... .+.+..+.++.+++.+.++..|.|..|.+.+...+||||||||++||||
T Consensus 75 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~a 154 (220)
T cd03245 75 DLRRNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARA 154 (220)
T ss_pred HHHhhEEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHH
Confidence 37999999998888999999887543 4456667788888888888889898888888899999999999999999
Q ss_pred HccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcc
Q 000504 735 VYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 735 l~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g 801 (1458)
+..+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++..||+|++|++|++++.|
T Consensus 155 l~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 155 LLNDPPILLLDEPTSAMDMNSEERLKE-RLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999877765 455555568999999999988779999999999997654
No 356
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.6e-36 Score=299.22 Aligned_cols=198 Identities=26% Similarity=0.423 Sum_probs=174.6
Q ss_pred EeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCc
Q 000504 1216 QYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLF 1295 (1458)
Q Consensus 1216 ~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF 1295 (1458)
+|.....++|+|+||++.+||.++|.||||||||||++.+.-+..|++|.++..|.|++.++++.+|++++|+-|.|.||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 56655667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHhcC-cC---C-CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeC
Q 000504 1296 QGTVRTNLD-PL---E-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDE 1370 (1458)
Q Consensus 1296 ~gTIR~NLd-p~---~-~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDE 1370 (1458)
.+||.+||- |+ + ..+...-.+-|+++++.+.+ |+.+ ..+||||||||++|+|-|---|+||+|||
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~~~~------L~k~----it~lSGGE~QriAliR~Lq~~P~ILLLDE 159 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRAAALDLLARFALPDSI------LTKN----ITELSGGEKQRIALIRNLQFMPKILLLDE 159 (223)
T ss_pred ccchhhccccchHHhccCCChHHHHHHHHHcCCchhh------hcch----hhhccchHHHHHHHHHHhhcCCceEEecC
Confidence 999999985 43 2 23344456667777776654 3333 45799999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhh-hhhcCEEEEEeCCEEEEe
Q 000504 1371 ATASIDTATDNVIQQTIREET--SRCTVITVAHRIPT-VIDNDLVLVLDEGKVLEY 1423 (1458)
Q Consensus 1371 aTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~t-i~~~DrVlvL~~G~ivE~ 1423 (1458)
+||+||..+.+.|.+.|...+ ++..|+.|||+.+. +..+||++.+..|++-|.
T Consensus 160 ~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~~ 215 (223)
T COG4619 160 ITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGEM 215 (223)
T ss_pred chhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCccccc
Confidence 999999999999999998887 46799999999988 788999999999987543
No 357
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2e-35 Score=332.60 Aligned_cols=190 Identities=27% Similarity=0.388 Sum_probs=162.8
Q ss_pred eeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCCcc-ccHHHhc
Q 000504 1225 LKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQ-GTVRTNL 1303 (1458)
Q Consensus 1225 L~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~-gTIR~NL 1303 (1458)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 579999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CcC-----CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCC
Q 000504 1304 DPL-----EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATAS 1374 (1458)
Q Consensus 1304 dp~-----~~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTss 1374 (1458)
... ...++ +++.+.++.+++.+.. +..+ ..||||||||++|||||+++|++|||||||++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 144 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRAIVEEHIALVGLTEAA-------DKRP----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGA 144 (230)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHcCCHHHH-------cCCh----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 532 22332 2356777777776543 2333 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1375 IDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1375 lD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++.+++
T Consensus 145 LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 145 LDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999999999998764 37899999999999865 9999999999999999887663
No 358
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=3.5e-35 Score=323.77 Aligned_cols=194 Identities=26% Similarity=0.392 Sum_probs=168.5
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ..+|++++|
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 578999999964 35899999999999999999999999999999999999999999999999987643 568899999
Q ss_pred EccCCCCc-cccHHHhcCcC-CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000504 1288 IPQDPMLF-QGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRI 1365 (1458)
Q Consensus 1288 IpQdp~LF-~gTIR~NLdp~-~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~I 1365 (1458)
+||+|.++ ..|+++|+... ....++++.++++..++.+.. +..+ .+||+|||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFE-------DRPV----AQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhh-------cCch----hhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999876 57999999654 234677888899999987543 2333 46999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhh-hhcCEEEEE
Q 000504 1366 LVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTV-IDNDLVLVL 1415 (1458)
Q Consensus 1366 LlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti-~~~DrVlvL 1415 (1458)
|||||||++||+.+.+.+.+.|++.. +++|+|+|||+...+ ..||+++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999998753 478999999987765 558999887
No 359
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.6e-35 Score=350.48 Aligned_cols=195 Identities=29% Similarity=0.356 Sum_probs=159.9
Q ss_pred cccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC-----------------EEEEEcCCCCCCC
Q 000504 611 TIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-----------------KKAYVPQSSWIQT 672 (1458)
Q Consensus 611 ~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-----------------~~ayv~Q~~~i~~ 672 (1458)
...++| ||+|++||+++|+||||||||||+++|+|+++|++|++ .++| .++||+|+++++.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I-~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQI-FIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEE-EECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 457889 99999999999999999999999999999999999987 6665 4799999999986
Q ss_pred -CcHHHHHhcCCCC---C-HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCC
Q 000504 673 -GTIRENILFGKDM---R-QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDP 747 (1458)
Q Consensus 673 -~Ti~enI~fg~~~---~-~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep 747 (1458)
.||+|||.|+.++ + +++++++.+.+.+. |-....++.+.+|||||||||+|||||+.+|+|+|||||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~v--------gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP 156 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLV--------GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEA 156 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc--------CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 5999999987543 2 23334443333211 111234567789999999999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhc-cCCEEEEEeCCeEEEcccchhhhhhcchHH
Q 000504 748 FSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYEDLIADQNSEL 814 (1458)
Q Consensus 748 ~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~~~~~~ 814 (1458)
||+||+.+++++++.+..... .++|+|+||||++++. .||+|++|++|++++.|+++++......++
T Consensus 157 ~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 157 FSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 999999999999876654433 3899999999999875 599999999999999999999876443333
No 360
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=3.2e-35 Score=335.20 Aligned_cols=210 Identities=20% Similarity=0.282 Sum_probs=168.2
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccC--CCCCcEEEEcCeeCCCCCHHHHh-cc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV--EPSGGRILIDGVDISMIGLQDLR-SR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~IDG~dI~~i~l~~LR-~~ 1284 (1458)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999974 35999999999999999999999999999999999995 69999999999999887776654 57
Q ss_pred eEEEccCCCCccc-cHHHhcC-------cCCCC---C----HHHHHHHHHHcCcHHHHHhccccc-CccccCCCCCCChh
Q 000504 1285 LSIIPQDPMLFQG-TVRTNLD-------PLEQH---S----DQEIWEVINKCHLAEIVRQDQRLL-DAPVAEDGENWSVG 1348 (1458)
Q Consensus 1285 i~iIpQdp~LF~g-TIR~NLd-------p~~~~---s----deeI~~aL~~~~L~~~i~~lp~gL-dt~v~e~G~nLSgG 1348 (1458)
++++||+|.++.. |..+++. ..... . ++.+.+.++..++ |+++ +..+ ..+||||
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~---~~~LS~G 149 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKM-------PEDLLTRSV---NVGFSGG 149 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCC-------ChhhcccCC---CCCCCHH
Confidence 9999999987764 4444332 11100 0 1112223333332 2222 2222 1369999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC-CcEEEEEecChhhhhh--cCEEEEEeCCEEEEecC
Q 000504 1349 QRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS-RCTVITVAHRIPTVID--NDLVLVLDEGKVLEYDS 1425 (1458)
Q Consensus 1349 QrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~-~~TVI~IAHrl~ti~~--~DrVlvL~~G~ivE~g~ 1425 (1458)
||||++||||++++|+||+|||||++||.++...+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+
T Consensus 150 ~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~ 229 (248)
T PRK09580 150 EKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGD 229 (248)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCC
Confidence 99999999999999999999999999999999999999987643 6899999999999887 89999999999999999
Q ss_pred hhHH
Q 000504 1426 PRQL 1429 (1458)
Q Consensus 1426 p~~L 1429 (1458)
++..
T Consensus 230 ~~~~ 233 (248)
T PRK09580 230 FTLV 233 (248)
T ss_pred HHHH
Confidence 8754
No 361
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.9e-35 Score=352.26 Aligned_cols=228 Identities=25% Similarity=0.424 Sum_probs=191.7
Q ss_pred cEEEEeeeEEeCCCCC--cceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCC----CcEEEEcCeeCCCCCHHH
Q 000504 1207 KIELENLLVQYNPTLP--MVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS----GGRILIDGVDISMIGLQD 1280 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~--~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~----~G~I~IDG~dI~~i~l~~ 1280 (1458)
-++++|+++.|..... .+++||||++.+||.+||||.|||||||+.++|.|+.++. +|+|.+||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975433 5999999999999999999999999999999999999987 899999999999998766
Q ss_pred Hh----cceEEEccCCC-Cccc--cHHHhcCc----CC----CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCC
Q 000504 1281 LR----SRLSIIPQDPM-LFQG--TVRTNLDP----LE----QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENW 1345 (1458)
Q Consensus 1281 LR----~~i~iIpQdp~-LF~g--TIR~NLdp----~~----~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1345 (1458)
+| ++|++|||||. .++- ||.+-+.- .. +...++..+.|+++++.+-... ..-...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 54 57999999994 4543 55555531 11 1123456778888887554332 2234679
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000504 1346 SVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLE 1422 (1458)
Q Consensus 1346 SgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE 1422 (1458)
|||||||+.||+||..+|++||+||||.+||+.|.+.|.+.|++.. .+.++|+|||++..+.. ||||+||.+|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999765 57899999999999976 99999999999999
Q ss_pred ecChhHHhhcCCChHHHHHHH
Q 000504 1423 YDSPRQLLEDNSSSFSKLVAE 1443 (1458)
Q Consensus 1423 ~g~p~~Ll~~~~s~F~~l~~~ 1443 (1458)
.|+++++++++...|.+..-+
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll~ 256 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLLA 256 (539)
T ss_pred ecCHHHHHhccCCcccHHHHh
Confidence 999999999988777665533
No 362
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.6e-35 Score=332.93 Aligned_cols=191 Identities=27% Similarity=0.405 Sum_probs=160.0
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEc-cCCCCc-cccH
Q 000504 1222 PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIP-QDPMLF-QGTV 1299 (1458)
Q Consensus 1222 ~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIp-Qdp~LF-~gTI 1299 (1458)
.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... ...+|++++|+| |++.+| ..|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 4599999999999999999999999999999999999999999999999987653 346788999997 667776 4599
Q ss_pred HHhcCcC---CCCCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcC
Q 000504 1300 RTNLDPL---EQHSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEAT 1372 (1458)
Q Consensus 1300 R~NLdp~---~~~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaT 1372 (1458)
++|+... ...+++ .+.++++..++.+. +|+.+ ..||+|||||++|||||+++|++|+|||||
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-------~~~~~----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEEL-------LDTPV----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhH-------hcCCh----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 9998532 122332 34455666666433 34444 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1373 ASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1373 sslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
++||+++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999998643 6899999999998865 9999999999998765
No 363
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.2e-34 Score=382.93 Aligned_cols=207 Identities=28% Similarity=0.291 Sum_probs=146.9
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHH---------HHhccCCCCC----c----EEEEc
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQ---------ALFRVVEPSG----G----RILID 1269 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~---------~L~rl~~p~~----G----~I~ID 1269 (1458)
.++++|++. ..|+|+|++|++||.+||+|+||||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 588888762 2699999999999999999999999999999 4445332211 1 24555
Q ss_pred CeeCCCCC----H------HHHhc---------ce-----EEEccC------------------C---------------
Q 000504 1270 GVDISMIG----L------QDLRS---------RL-----SIIPQD------------------P--------------- 1292 (1458)
Q Consensus 1270 G~dI~~i~----l------~~LR~---------~i-----~iIpQd------------------p--------------- 1292 (1458)
-.+|..-+ . +++|+ +. .+..|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 44443211 1 24551 11 112221 1
Q ss_pred -----CCccc-cHHHhcCcCCC------CCHHHHHHH---HHHcCcHHHHHhcccccCcc-ccCCCCCCChhHHHHHHHH
Q 000504 1293 -----MLFQG-TVRTNLDPLEQ------HSDQEIWEV---INKCHLAEIVRQDQRLLDAP-VAEDGENWSVGQRQLVCLA 1356 (1458)
Q Consensus 1293 -----~LF~g-TIR~NLdp~~~------~sdeeI~~a---L~~~~L~~~i~~lp~gLdt~-v~e~G~nLSgGQrQrl~LA 1356 (1458)
+.+.+ ||.|||+.... ...+++.+. |+.+ ||+.. .+....+||||||||++||
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~~L~~v-----------GL~~l~l~q~~~tLSGGE~QRV~LA 821 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIHALCSL-----------GLDYLPLGRPLSSLSGGEIQRLKLA 821 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHHHHHHc-----------CCcchhhcCccccCCHHHHHHHHHH
Confidence 13333 67777754211 012223222 2222 34432 4555668999999999999
Q ss_pred HHhc---cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEEe------CCEEEEecCh
Q 000504 1357 RVLL---KKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVLD------EGKVLEYDSP 1426 (1458)
Q Consensus 1357 RALL---r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~~DrVlvL~------~G~ivE~g~p 1426 (1458)
|||+ ++|++|||||||++||..+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|++++.|+|
T Consensus 822 raL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 822 YELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred HHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 9998 5999999999999999999999999998754 4789999999999998899999996 7999999999
Q ss_pred hHHhh
Q 000504 1427 RQLLE 1431 (1458)
Q Consensus 1427 ~~Ll~ 1431 (1458)
+++.+
T Consensus 902 eel~~ 906 (1809)
T PRK00635 902 EELIH 906 (1809)
T ss_pred HHHHh
Confidence 99985
No 364
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.9e-35 Score=365.76 Aligned_cols=212 Identities=26% Similarity=0.401 Sum_probs=184.2
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHh-cce
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLR-SRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR-~~i 1285 (1458)
.|+++|++++|.. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+..+++ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999964 4599999999999999999999999999999999999999999999999999887777655 569
Q ss_pred EEEccCCCCccc-cHHHhcCcCCC-C--CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhcc
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPLEQ-H--SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~~~-~--sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1361 (1458)
+|+||+|.+|.+ |+++|+..... . .++++.++++..++.+. ++..+ .+||||||||++|||||++
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LSgG~~qrv~la~aL~~ 157 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLD-------LDSSA----GSLEVADRQIVEILRGLMR 157 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcc-------ccCCh----hhCCHHHHHHHHHHHHHHc
Confidence 999999998876 99999974321 1 23456677777776432 33444 4699999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1362 KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1362 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
+|+||+|||||++||+.+...+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 158 DSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 999999999999999999999999998753 47899999999999865 99999999999999999998864
No 365
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.7e-35 Score=345.64 Aligned_cols=203 Identities=25% Similarity=0.350 Sum_probs=166.0
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
|+++|++++|+..+ ...+.|+| ||++++||+++|+|+||||||||+++|.|+.+|++|++ .++|
T Consensus 2 I~~~~lsk~y~~~~----~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I-~i~G~~i~~~~~~~ 76 (343)
T TIGR02314 2 IKLSNITKVFHQGT----KTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSV-IVDGQDLTTLSNSE 76 (343)
T ss_pred EEEEEEEEEECCCC----cceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEE-EECCEECCcCCHHH
Confidence 78999999996420 12468999 99999999999999999999999999999999999987 6665
Q ss_pred ------EEEEEcCCCCCCC-CcHHHHHhcCCC---CCHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 ------KKAYVPQSSWIQT-GTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~enI~fg~~---~~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
.++|++|++.++. .|++||+.++.. .+.. +..++++..+|.+ ..+....+|||||
T Consensus 77 l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~-----------~~~~~~~~LSgGq 145 (343)
T TIGR02314 77 LTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGD-----------KHDSYPSNLSGGQ 145 (343)
T ss_pred HHHHhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhhCChhhCCHHH
Confidence 3799999998874 799999998643 2221 1223333333322 2345677999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhcc-CCEEEEEeCCeEEEccc
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~ 802 (1458)
||||+|||||+.+|+++|||||||+||+.+...+.+ +++.+. + +.|+|++||+++.+.. ||+|++|++|+|++.|+
T Consensus 146 kQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~-lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~ 224 (343)
T TIGR02314 146 KQRVAIARALASNPKVLLCDEATSALDPATTQSILE-LLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGT 224 (343)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcC
Confidence 999999999999999999999999999999888876 444443 2 7999999999999865 99999999999999999
Q ss_pred chhhhhhc
Q 000504 803 YEDLIADQ 810 (1458)
Q Consensus 803 ~~~l~~~~ 810 (1458)
++++....
T Consensus 225 ~~~v~~~p 232 (343)
T TIGR02314 225 VSEIFSHP 232 (343)
T ss_pred HHHHHcCC
Confidence 99987633
No 366
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=7.8e-35 Score=309.82 Aligned_cols=159 Identities=32% Similarity=0.549 Sum_probs=147.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH-HHhcceE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ-DLRSRLS 1286 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~-~LR~~i~ 1286 (1458)
|+++|++++|+. .++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|++++
T Consensus 1 l~~~~l~~~~~~--~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGG--VKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 578999999964 3599999999999999999999999999999999999999999999999999888764 4678899
Q ss_pred EEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEE
Q 000504 1287 IIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRIL 1366 (1458)
Q Consensus 1287 iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~IL 1366 (1458)
++|| ||+|||||++||||++++|++|
T Consensus 79 ~~~q------------------------------------------------------LS~G~~qrl~laral~~~p~il 104 (163)
T cd03216 79 MVYQ------------------------------------------------------LSVGERQMVEIARALARNARLL 104 (163)
T ss_pred EEEe------------------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999 9999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000504 1367 VLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLE 1422 (1458)
Q Consensus 1367 lLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE 1422 (1458)
+|||||++||.++.+.+.+.|++.. ++.|+|+++|+++.+.. ||++++|++|++++
T Consensus 105 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 105 ILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999998764 47899999999998865 99999999999976
No 367
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-36 Score=320.02 Aligned_cols=213 Identities=23% Similarity=0.400 Sum_probs=185.5
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH-HhcceE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRLS 1286 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i~ 1286 (1458)
.+.++++.+|.. -.+++|+||++++||.+||+|||||||||++|++.|+|+|++|+|.++|.||..++.+. -|..|+
T Consensus 5 L~v~~l~k~FGG--l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFGG--LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecCC--EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 578999999964 35999999999999999999999999999999999999999999999999999999988 467789
Q ss_pred EEccCCCCccc-cHHHhcCcCCC-------------C--C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCC
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPLEQ-------------H--S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWS 1346 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~~~-------------~--s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1346 (1458)
--.|.+-+|++ |+-||+.-... + . .++-.+.|+.++|.+.. .+...+||
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a-----------~~~A~~Ls 151 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELA-----------DRPAGNLS 151 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhh-----------cchhhcCC
Confidence 99999999988 99999853210 1 1 23345566666665543 23345799
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000504 1347 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETS--RCTVITVAHRIPTVID-NDLVLVLDEGKVLEY 1423 (1458)
Q Consensus 1347 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~--~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~ 1423 (1458)
.||++||-|||||..+|++|+||||.|++.++-...+.+.|++..+ +.||++|-||++.+++ ||||+||+.|+++..
T Consensus 152 yG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAe 231 (250)
T COG0411 152 YGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAE 231 (250)
T ss_pred hhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCccc
Confidence 9999999999999999999999999999999999999999998764 4899999999999988 999999999999999
Q ss_pred cChhHHhhcC
Q 000504 1424 DSPRQLLEDN 1433 (1458)
Q Consensus 1424 g~p~~Ll~~~ 1433 (1458)
|+|++..+|+
T Consensus 232 G~P~eV~~dp 241 (250)
T COG0411 232 GTPEEVRNNP 241 (250)
T ss_pred CCHHHHhcCH
Confidence 9999999775
No 368
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-35 Score=314.35 Aligned_cols=204 Identities=26% Similarity=0.369 Sum_probs=166.4
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1458)
..|+++|++-.|+.. ...|++ |++|++||+++|+|++||||||||++|.|..+|++|++ .++|
T Consensus 2 ~~i~~~nl~k~yp~~-------~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i-~~~g~~i~~~~~ 73 (258)
T COG3638 2 MMIEVKNLSKTYPGG-------HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEI-LFNGVQITKLKG 73 (258)
T ss_pred ceEEEeeeeeecCCC-------ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceE-Eecccchhccch
Confidence 358999999999743 678999 99999999999999999999999999999999999987 6666
Q ss_pred --------EEEEEcCCCCC-CCCcHHHHHhcCCCCC------------HHHHHHHHHHhhhhhhHHhhcCCCcccccCCC
Q 000504 660 --------KKAYVPQSSWI-QTGTIRENILFGKDMR------------QSFYEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1458)
Q Consensus 660 --------~~ayv~Q~~~i-~~~Ti~enI~fg~~~~------------~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g 718 (1458)
++||++|++-+ +..||.+|++.|+--. ++....++++- +. -|-....-.+.
T Consensus 74 k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aL------er--vgi~~~A~qra 145 (258)
T COG3638 74 KELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDAL------ER--VGILDKAYQRA 145 (258)
T ss_pred HHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHH------HH--cCcHHHHHHHh
Confidence 36999999876 5679999999886322 22222222211 11 01111223567
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhc-cCCEEEEEeCCe
Q 000504 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLD-AADLVLVMKDGK 796 (1458)
Q Consensus 719 ~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~-~~D~i~~l~~G~ 796 (1458)
.+|||||+|||+|||||+++|+|+|-|||+++|||.+++++++.+.+.. ..|.|+|+.-|++++.. +||||+-|++|+
T Consensus 146 ~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ 225 (258)
T COG3638 146 STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGR 225 (258)
T ss_pred ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCc
Confidence 7999999999999999999999999999999999999999987554332 35899999999999975 599999999999
Q ss_pred EEEcccchhhhh
Q 000504 797 IEQSGKYEDLIA 808 (1458)
Q Consensus 797 i~~~g~~~~l~~ 808 (1458)
|++.|+.+|+.+
T Consensus 226 ivfDg~~~el~~ 237 (258)
T COG3638 226 IVFDGPASELTD 237 (258)
T ss_pred EEEeCChhhhhH
Confidence 999999998644
No 369
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=367.13 Aligned_cols=211 Identities=25% Similarity=0.389 Sum_probs=180.2
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEEcCeeCCCCCHHH-Hhc
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP--SGGRILIDGVDISMIGLQD-LRS 1283 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p--~~G~I~IDG~dI~~i~l~~-LR~ 1283 (1458)
-|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+..+ .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 4899999999963 3599999999999999999999999999999999999996 8999999999998777654 467
Q ss_pred ceEEEccCCCCccc-cHHHhcCcCCC------CCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1284 RLSIIPQDPMLFQG-TVRTNLDPLEQ------HSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1284 ~i~iIpQdp~LF~g-TIR~NLdp~~~------~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
+++|+||+|.+|.. |+++|+..... .+. +++.++++..++.+ -++..+ .+||||||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~----~~LSgGqkqr 151 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDI-------NPATPV----GNLGLGQQQL 151 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCC-------Ccccch----hhCCHHHHHH
Confidence 89999999988875 99999974211 121 34556666665532 223334 4699999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
++|||||+.+|+|||||||||+||+.+...+.+.|++.. ++.|||+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 231 (506)
T PRK13549 152 VEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMT 231 (506)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCC
Confidence 999999999999999999999999999999999998753 46899999999999875 9999999999999999988875
No 370
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.1e-35 Score=322.71 Aligned_cols=194 Identities=25% Similarity=0.396 Sum_probs=168.0
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 689999999964 35999999999999999999999999999999999999999999999999987654 457889999
Q ss_pred EccCCCCcc-ccHHHhcCcCC----CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccC
Q 000504 1288 IPQDPMLFQ-GTVRTNLDPLE----QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKK 1362 (1458)
Q Consensus 1288 IpQdp~LF~-gTIR~NLdp~~----~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~ 1362 (1458)
+||++.++. .|+++|+.... ...++++.++++..++.+.. |..+ ..||+|||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~~~----~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFE-------DVPV----RQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHh-------hCCh----hhcCHHHHHHHHHHHHHhcC
Confidence 999998886 59999996421 13456788899999987654 2232 46999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEE
Q 000504 1363 KRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVL 1415 (1458)
Q Consensus 1363 ~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL 1415 (1458)
|++|+|||||++||+++...+.+.|++.. +++|+|++||+++.+.. .+|++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999998753 46899999999999965 4577776
No 371
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=365.92 Aligned_cols=212 Identities=22% Similarity=0.343 Sum_probs=179.8
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHH-Hhcce
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQD-LRSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~-LR~~i 1285 (1458)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999997765544 46789
Q ss_pred EEEccCCCCccc-cHHHhcCcCC-------CCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHH
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPLE-------QHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLV 1353 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~~-------~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1353 (1458)
+|+||+|.+|.. |+++|+.... ..+. +++.++++.+++.+ .+|.++ .+||||||||+
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~----~~LSgG~~qrv 150 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRF-------SSDKLV----GELSIGEQQMV 150 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCC-------CccCch----hhCCHHHHHHH
Confidence 999999988876 9999997421 1122 23455666666532 234444 46999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1354 CLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1354 ~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
+|||||+.+|++|+|||||++||+.+...+.+.|++.. .+.|||+|+|+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (501)
T PRK10762 151 EIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE 230 (501)
T ss_pred HHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH
Confidence 99999999999999999999999999999999998753 46899999999999865 99999999999999999887643
No 372
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-35 Score=367.67 Aligned_cols=212 Identities=20% Similarity=0.300 Sum_probs=181.3
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHH-hcce
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL-RSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L-R~~i 1285 (1458)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999964 359999999999999999999999999999999999999999999999999988776653 5679
Q ss_pred EEEccCCCCccc-cHHHhcCcCC-------CC---C----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHH
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPLE-------QH---S----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQR 1350 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~~-------~~---s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1350 (1458)
+|+||+|.+|.+ |+++|+.... .. + ++++.++++.+++.+ .+|.++ .+||||||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~~----~~LSgG~~ 151 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKV-------DLDEKV----ANLSISHK 151 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCC-------Ccccch----hhCCHHHH
Confidence 999999988876 9999996321 10 1 134556666666532 234444 46999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000504 1351 QLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQ 1428 (1458)
Q Consensus 1351 Qrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~ 1428 (1458)
||++|||||+++|+||+|||||++||+.+...+.+.|++.. ++.|||+|+|+++.+.+ ||+|++|++|++++.|++++
T Consensus 152 qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (510)
T PRK09700 152 QMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSD 231 (510)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhh
Confidence 99999999999999999999999999999999999998753 46899999999999875 99999999999999999988
Q ss_pred Hhh
Q 000504 1429 LLE 1431 (1458)
Q Consensus 1429 Ll~ 1431 (1458)
+..
T Consensus 232 ~~~ 234 (510)
T PRK09700 232 VSN 234 (510)
T ss_pred CCH
Confidence 754
No 373
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-35 Score=341.15 Aligned_cols=206 Identities=27% Similarity=0.422 Sum_probs=167.0
Q ss_pred CccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC-------
Q 000504 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------- 659 (1458)
Q Consensus 588 ~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------- 659 (1458)
+..++++|++|+|+.... ...+.|+| ||+|++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 19 ~~~l~~~nl~~~y~~~~~---~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I-~i~g~~~~~~~ 94 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQE---NELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTI-QVGDIYIGDKK 94 (320)
T ss_pred CceEEEEeEEEEeCCCCc---ccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeE-EECCEEccccc
Confidence 356999999999974300 12468999 99999999999999999999999999999999999987 5553
Q ss_pred ----------------------EEEEEcCCC--CCCCCcHHHHHhcCCC---CCHHH----HHHHHHHhhhhhhHHhhcC
Q 000504 660 ----------------------KKAYVPQSS--WIQTGTIRENILFGKD---MRQSF----YEEVLEGCALNQDIEMWAD 708 (1458)
Q Consensus 660 ----------------------~~ayv~Q~~--~i~~~Ti~enI~fg~~---~~~~~----y~~vl~~c~l~~dl~~l~~ 708 (1458)
.++||+|+| .+++.||+|||.|+.. .+.+. .++.++.+++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------- 167 (320)
T PRK13631 95 NNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD------- 167 (320)
T ss_pred ccccccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh-------
Confidence 269999998 6888899999999742 12221 222222222211
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhc-cC
Q 000504 709 GDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLD-AA 786 (1458)
Q Consensus 709 gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~-~~ 786 (1458)
...++.+.+||||||||++|||||..+|+++||||||++||+.+...+.+ ++..+ .+++|+|+|||+++++. .|
T Consensus 168 ---~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~-~L~~l~~~g~TiiivtHd~~~~~~~a 243 (320)
T PRK13631 168 ---SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQ-LILDAKANNKTVFVITHTMEHVLEVA 243 (320)
T ss_pred ---hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhC
Confidence 23467788999999999999999999999999999999999999888876 44443 35899999999999875 59
Q ss_pred CEEEEEeCCeEEEcccchhhhh
Q 000504 787 DLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 787 D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
|+|++|++|++++.|+++++..
T Consensus 244 dri~vl~~G~i~~~g~~~~~~~ 265 (320)
T PRK13631 244 DEVIVMDKGKILKTGTPYEIFT 265 (320)
T ss_pred CEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999998865
No 374
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.3e-34 Score=323.68 Aligned_cols=197 Identities=40% Similarity=0.746 Sum_probs=173.8
Q ss_pred EEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC-----------
Q 000504 592 DIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG----------- 659 (1458)
Q Consensus 592 ~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g----------- 659 (1458)
.+.|+.|+|+.+ .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 2 ~~~~~~~~~~~~-------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~~~~~~ 73 (218)
T cd03290 2 QVTNGYFSWGSG-------LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKV-HWSNKNESEPSFEAT 73 (218)
T ss_pred eeeeeEEecCCC-------CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeE-EECCccccccccccc
Confidence 567899999753 468999 99999999999999999999999999999999999986 5543
Q ss_pred ------EEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHH
Q 000504 660 ------KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLAR 733 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 733 (1458)
.++|++|+|.+++.|++||+.++.+.+.++.+++++.+++.+.++..|.|+.+.++....+||||||||++|||
T Consensus 74 ~~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~lar 153 (218)
T cd03290 74 RSRNRYSVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVAR 153 (218)
T ss_pred chhhcceEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHH
Confidence 47999999999889999999998766666677888889888888888999989889999999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCChhhHHHHHHH-HHHHHh-CCcEEEEEecccchhccCCEEEEEeCCe
Q 000504 734 AVYSNSDVYIFDDPFSAVDAHTGTHLFKQ-CLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGK 796 (1458)
Q Consensus 734 Al~~~~~i~lLDep~saLD~~~~~~i~~~-~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~ 796 (1458)
|++.+|+++||||||++||+.+...+.+. ++..+. .++|+|++||+.+++..||++++|++|+
T Consensus 154 al~~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 154 ALYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred HHhhCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999999998877763 444433 3789999999999988899999999884
No 375
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-35 Score=344.17 Aligned_cols=201 Identities=27% Similarity=0.374 Sum_probs=166.3
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|.. ...+++ |+++++||+++|+|||||||||||++|+|+.+|++|++ .++|
T Consensus 6 ~l~~~~l~~~~~~--------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I-~~~g~~i~~~~~~ 76 (351)
T PRK11432 6 FVVLKNITKRFGS--------NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQI-FIDGEDVTHRSIQ 76 (351)
T ss_pred EEEEEeEEEEECC--------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEE-EECCEECCCCCHH
Confidence 5899999999963 357899 99999999999999999999999999999999999986 7776
Q ss_pred --EEEEEcCCCCCCC-CcHHHHHhcCCCC---CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 660 --KKAYVPQSSWIQT-GTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 660 --~~ayv~Q~~~i~~-~Ti~enI~fg~~~---~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
.++||+|++.++. .||+|||.|+... .+ ++.+++++..++.. ..+....+|||||||||
T Consensus 77 ~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~-----------~~~r~~~~LSgGq~QRV 145 (351)
T PRK11432 77 QRDICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAG-----------FEDRYVDQISGGQQQRV 145 (351)
T ss_pred HCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHHHHHHH
Confidence 3699999998875 6999999998542 22 12223333333321 23456789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhC--CcEEEEEecccchhc-cCCEEEEEeCCeEEEcccchhh
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLS--QKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYEDL 806 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~--~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l 806 (1458)
+|||||+.+|+++|||||||+||+.....+.+. ++.+.+ ++|+|+||||.+++. .||+|++|++|+|.+.|+++++
T Consensus 146 aLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~ 224 (351)
T PRK11432 146 ALARALILKPKVLLFDEPLSNLDANLRRSMREK-IRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQEL 224 (351)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999999998887664 444433 799999999999875 5999999999999999999998
Q ss_pred hhhcc
Q 000504 807 IADQN 811 (1458)
Q Consensus 807 ~~~~~ 811 (1458)
.....
T Consensus 225 ~~~p~ 229 (351)
T PRK11432 225 YRQPA 229 (351)
T ss_pred HhCCC
Confidence 76433
No 376
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-35 Score=328.81 Aligned_cols=197 Identities=29% Similarity=0.394 Sum_probs=160.6
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|.+++|+. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i-~~~g~~~~~~~~~~ 71 (235)
T cd03261 1 IELRGLTKSFGG--------RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEV-LIDGEDISGLSEAE 71 (235)
T ss_pred CeEEEEEEEECC--------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEEccccChhh
Confidence 468899999853 358999 99999999999999999999999999999999999986 6654
Q ss_pred ------EEEEEcCCCCCCC-CcHHHHHhcCCC----CCHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChH
Q 000504 660 ------KKAYVPQSSWIQT-GTIRENILFGKD----MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~enI~fg~~----~~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGG 724 (1458)
.++|++|++.++. .|++||+.++.. .+.. +.+++++.+++.. .......+||||
T Consensus 72 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG 140 (235)
T cd03261 72 LYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRG-----------AEDLYPAELSGG 140 (235)
T ss_pred HHHHhcceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHH
Confidence 2799999998776 499999988632 1221 2233333333321 224556789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
|||||+||||+..+|+++||||||++||+.+...+.+ .+..+. .++|+|+|||+++++.. ||+|++|++|++++.|
T Consensus 141 ~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g 219 (235)
T cd03261 141 MKKRVALARALALDPELLLYDEPTAGLDPIASGVIDD-LIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEG 219 (235)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEec
Confidence 9999999999999999999999999999999887766 454443 37999999999998865 9999999999999999
Q ss_pred cchhhhh
Q 000504 802 KYEDLIA 808 (1458)
Q Consensus 802 ~~~~l~~ 808 (1458)
+++++..
T Consensus 220 ~~~~~~~ 226 (235)
T cd03261 220 TPEELRA 226 (235)
T ss_pred CHHHHcC
Confidence 9888754
No 377
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-35 Score=372.49 Aligned_cols=223 Identities=25% Similarity=0.358 Sum_probs=182.0
Q ss_pred cEEEEeeeEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCC----------
Q 000504 1207 KIELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDIS---------- 1274 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~---------- 1274 (1458)
-|+++|++++|+.. ..++|+||||+|++||++||||+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 59999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred CCCHH---HHh-cceEEEccCC--CCccc-cHHHhcCcC----CCCC----HHHHHHHHHHcCcHHHHHhcccccCcccc
Q 000504 1275 MIGLQ---DLR-SRLSIIPQDP--MLFQG-TVRTNLDPL----EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVA 1339 (1458)
Q Consensus 1275 ~i~l~---~LR-~~i~iIpQdp--~LF~g-TIR~NLdp~----~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~ 1339 (1458)
+.+.. .+| ++|++|+|+| .++.. ||++|+... ...+ ++++.++|+.+++.+.- .-++..+
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----~~~~~~~- 166 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQ----TILSRYP- 166 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChh----hHHhCCC-
Confidence 22222 344 5799999999 57764 999998631 1122 23566778888774210 1123333
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-C-CcEEEEEecChhhhhh-cCEEEEEe
Q 000504 1340 EDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-S-RCTVITVAHRIPTVID-NDLVLVLD 1416 (1458)
Q Consensus 1340 e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~-~~TVI~IAHrl~ti~~-~DrVlvL~ 1416 (1458)
.+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. + ++|||+|||+++.+.. ||||++|+
T Consensus 167 ---~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 167 ---HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred ---ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 4699999999999999999999999999999999999999999999864 2 7899999999999865 99999999
Q ss_pred CCEEEEecChhHHhhcCCChH
Q 000504 1417 EGKVLEYDSPRQLLEDNSSSF 1437 (1458)
Q Consensus 1417 ~G~ivE~g~p~~Ll~~~~s~F 1437 (1458)
+|++++.|+++++++++...|
T Consensus 244 ~G~i~~~g~~~~~~~~~~~~~ 264 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQHPY 264 (623)
T ss_pred CCeecccCCHHHhhcCCCChh
Confidence 999999999999986554333
No 378
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-34 Score=310.75 Aligned_cols=204 Identities=26% Similarity=0.402 Sum_probs=168.3
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE--------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1458)
.++++|.++.|+... ...+.+++ ||++.+||..+|+|++|||||||.++|+|..+|++|++ .++|+
T Consensus 3 ~l~v~nl~~~y~~~~----~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I-~~~G~~~~~~~~~ 77 (252)
T COG1124 3 LLSVRNLSIVYGGGK----FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSI-LLDGKPLAPKKRA 77 (252)
T ss_pred eEEEeceEEEecCCc----chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceE-EECCcccCccccc
Confidence 578999999998651 12268899 99999999999999999999999999999999999997 78773
Q ss_pred ------EEEEcCCCCC---CCCcHHHHHhcCCCC-----CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHH
Q 000504 661 ------KAYVPQSSWI---QTGTIRENILFGKDM-----RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1458)
Q Consensus 661 ------~ayv~Q~~~i---~~~Ti~enI~fg~~~-----~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 726 (1458)
+-+|+|+|.- +..||++-|.-+... .+.+..++++..+|.+.. ...+...|||||+
T Consensus 78 ~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~----------l~R~P~eLSGGQ~ 147 (252)
T COG1124 78 KAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSF----------LDRRPHELSGGQR 147 (252)
T ss_pred hhhccceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHH----------HhcCchhcChhHH
Confidence 6899999863 456898877543221 233445556666655432 3467789999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccc
Q 000504 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKY 803 (1458)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~ 803 (1458)
|||||||||..+|+++|||||||+||+.+...|++-+ ..+. ++-|.|+||||+..+.+ ||||+||++|+|++.++.
T Consensus 148 QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL-~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~ 226 (252)
T COG1124 148 QRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLL-LELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPT 226 (252)
T ss_pred HHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHH-HHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeech
Confidence 9999999999999999999999999999999998744 3333 36799999999999987 999999999999999999
Q ss_pred hhhhhh
Q 000504 804 EDLIAD 809 (1458)
Q Consensus 804 ~~l~~~ 809 (1458)
+++...
T Consensus 227 ~~l~~~ 232 (252)
T COG1124 227 EELLSH 232 (252)
T ss_pred hhhhcC
Confidence 988763
No 379
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.2e-34 Score=362.25 Aligned_cols=212 Identities=18% Similarity=0.219 Sum_probs=183.9
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+..++|+.++
T Consensus 3 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSD--TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCC--eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 3899999999964 34999999999999999999999999999999999999999999999999887777777888999
Q ss_pred EEccCCCC--c-------cccHHHhcCcCCCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1287 IIPQDPML--F-------QGTVRTNLDPLEQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1287 iIpQdp~L--F-------~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
++||+|.+ + .-|+++|+... ...++++.++++..++.+.. |.++ ..||||||||++|||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LSgG~~qrv~la~ 148 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDE-VKDPARCEQLAQQFGITALL-------DRRF----KYLSTGETRKTLLCQ 148 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccc-hhHHHHHHHHHHHcCCHhhh-------hCCc----ccCCHHHHHHHHHHH
Confidence 99999753 2 35899998642 12345678888888886543 3333 369999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
||+++|++|+|||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|++++++++
T Consensus 149 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 225 (490)
T PRK10938 149 ALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQ 225 (490)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcc
Confidence 9999999999999999999999999999998864 36899999999999876 999999999999999999998753
No 380
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.4e-34 Score=343.36 Aligned_cols=201 Identities=30% Similarity=0.381 Sum_probs=167.2
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE--------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1458)
.++++|++++|+. ...+++ ||++++||+++|+|||||||||||++|+|..+|++|++ .++|+
T Consensus 4 ~l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I-~i~g~~~~~~~~~ 74 (353)
T TIGR03265 4 YLSIDNIRKRFGA--------FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTI-YQGGRDITRLPPQ 74 (353)
T ss_pred EEEEEEEEEEeCC--------eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEE-EECCEECCCCCHH
Confidence 5899999999963 357899 99999999999999999999999999999999999997 77763
Q ss_pred ---EEEEcCCCCCC-CCcHHHHHhcCCCC---CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 661 ---KAYVPQSSWIQ-TGTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 661 ---~ayv~Q~~~i~-~~Ti~enI~fg~~~---~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
++||+|++-++ ..||+|||.|+... +. ++.+++++..+|.+ ....+..+|||||||||
T Consensus 75 ~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~-----------~~~~~~~~LSgGq~QRv 143 (353)
T TIGR03265 75 KRDYGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPG-----------SERKYPGQLSGGQQQRV 143 (353)
T ss_pred HCCEEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc-----------hhhCChhhCCHHHHHHH
Confidence 79999999887 47999999998532 21 22333344333322 23466789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhc-cCCEEEEEeCCeEEEcccchhh
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYEDL 806 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l 806 (1458)
+|||||+.+|+++|||||||+||+.+..++.+. ++.+. .+.|+|+||||++++. .||+|++|++|++++.|+++++
T Consensus 144 aLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~ 222 (353)
T TIGR03265 144 ALARALATSPGLLLLDEPLSALDARVREHLRTE-IRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEI 222 (353)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999999998888664 44433 2789999999999875 4999999999999999999999
Q ss_pred hhhcc
Q 000504 807 IADQN 811 (1458)
Q Consensus 807 ~~~~~ 811 (1458)
.+...
T Consensus 223 ~~~p~ 227 (353)
T TIGR03265 223 YRHPA 227 (353)
T ss_pred HhCCC
Confidence 87443
No 381
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=335.88 Aligned_cols=203 Identities=26% Similarity=0.414 Sum_probs=166.7
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
|+++|++|+|+.... ...+.+++ ||+|++||+++|+|+||||||||+++|.|+++|++|++ .++|
T Consensus 2 i~~~~v~~~y~~~~~---~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~i~~~~~~~ 77 (288)
T PRK13643 2 IKFEKVNYTYQPNSP---FASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKV-TVGDIVVSSTSKQK 77 (288)
T ss_pred EEEEEEEEEeCCCCc---ccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEE-EECCEECccccccc
Confidence 689999999974300 01358999 99999999999999999999999999999999999986 6765
Q ss_pred -------EEEEEcCCC--CCCCCcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCCh
Q 000504 660 -------KKAYVPQSS--WIQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1458)
Q Consensus 660 -------~~ayv~Q~~--~i~~~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSG 723 (1458)
.++||+|+| .++..|+.||+.|+.. ... .+++++++..+|..++ .+....+|||
T Consensus 78 ~~~~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSg 147 (288)
T PRK13643 78 EIKPVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSG 147 (288)
T ss_pred cHHHHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCH
Confidence 269999998 6778899999999753 111 2344445444443221 2456789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhc-cCCEEEEEeCCeEEEcc
Q 000504 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g 801 (1458)
|||||++||||++.+|+++||||||++||+.+.+.+.+ .+..+. +++|||++||+++++. .||+|++|++|++++.|
T Consensus 148 GqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~-~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g 226 (288)
T PRK13643 148 GQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQ-LFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCG 226 (288)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEEC
Confidence 99999999999999999999999999999999887765 455443 4899999999999986 59999999999999999
Q ss_pred cchhhhh
Q 000504 802 KYEDLIA 808 (1458)
Q Consensus 802 ~~~~l~~ 808 (1458)
+++++..
T Consensus 227 ~~~~~~~ 233 (288)
T PRK13643 227 TPSDVFQ 233 (288)
T ss_pred CHHHHHc
Confidence 9998865
No 382
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2e-34 Score=343.44 Aligned_cols=201 Identities=28% Similarity=0.386 Sum_probs=166.6
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE-------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK------- 660 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~------- 660 (1458)
..++++|++++|.. .+.+++ ||++++||+++|+|||||||||||++|+|+.+|++|++ .++|.
T Consensus 13 ~~L~l~~l~~~~~~--------~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I-~~~g~~i~~~~~ 83 (375)
T PRK09452 13 PLVELRGISKSFDG--------KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRI-MLDGQDITHVPA 83 (375)
T ss_pred ceEEEEEEEEEECC--------eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEE-EECCEECCCCCH
Confidence 45899999999963 357889 99999999999999999999999999999999999987 77764
Q ss_pred ----EEEEcCCCCCC-CCcHHHHHhcCCCC---CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHH
Q 000504 661 ----KAYVPQSSWIQ-TGTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQR 728 (1458)
Q Consensus 661 ----~ayv~Q~~~i~-~~Ti~enI~fg~~~---~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 728 (1458)
++||+|++.++ ..||+|||.|+... .+ ++.+++++..++... ...+..+||||||||
T Consensus 84 ~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~p~~LSgGq~QR 152 (375)
T PRK09452 84 ENRHVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEF-----------AQRKPHQLSGGQQQR 152 (375)
T ss_pred HHCCEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 79999999886 56999999998542 21 123334444444322 234567999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhc-cCCEEEEEeCCeEEEcccchh
Q 000504 729 IQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYED 805 (1458)
Q Consensus 729 v~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~ 805 (1458)
|+|||||+.+|+++|||||||+||++....+.+. +..+. .+.|+|+||||.+++. .||+|++|++|+|.+.|++++
T Consensus 153 VaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~ 231 (375)
T PRK09452 153 VAIARAVVNKPKVLLLDESLSALDYKLRKQMQNE-LKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPRE 231 (375)
T ss_pred HHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999998877654 44443 3799999999999865 599999999999999999999
Q ss_pred hhhhc
Q 000504 806 LIADQ 810 (1458)
Q Consensus 806 l~~~~ 810 (1458)
+....
T Consensus 232 i~~~p 236 (375)
T PRK09452 232 IYEEP 236 (375)
T ss_pred HHhCc
Confidence 87643
No 383
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.4e-34 Score=362.33 Aligned_cols=220 Identities=24% Similarity=0.399 Sum_probs=182.4
Q ss_pred cEEEEeeeEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCCCHH
Q 000504 1207 KIELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP-----SGGRILIDGVDISMIGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p-----~~G~I~IDG~dI~~i~l~ 1279 (1458)
.|+++|++++|+.+ ..++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 23699999999999999999999999999999999999986 799999999999877654
Q ss_pred H---Hh-cceEEEccCCC--Ccc-ccHHHhcCc----CCCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCC
Q 000504 1280 D---LR-SRLSIIPQDPM--LFQ-GTVRTNLDP----LEQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGEN 1344 (1458)
Q Consensus 1280 ~---LR-~~i~iIpQdp~--LF~-gTIR~NLdp----~~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1344 (1458)
+ .| ++++|+||+|. ++. -|+++|+.. ....+ .+++.++++.+++.+... -+|..+ .+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----~~~~~~----~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAK----RLTDYP----HQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHH----HHhhCC----cc
Confidence 3 34 57999999985 444 489998752 11122 245677888888754211 123333 46
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000504 1345 WSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVL 1421 (1458)
Q Consensus 1345 LSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~iv 1421 (1458)
||||||||++|||||+.+|++|+||||||+||+.+.+.+.+.|++.. .+.|||+|+|+++.+.. ||||++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998853 37899999999999865 9999999999999
Q ss_pred EecChhHHhhcCC
Q 000504 1422 EYDSPRQLLEDNS 1434 (1458)
Q Consensus 1422 E~g~p~~Ll~~~~ 1434 (1458)
+.|+++++++.+.
T Consensus 237 ~~g~~~~~~~~~~ 249 (529)
T PRK15134 237 EQNRAATLFSAPT 249 (529)
T ss_pred EeCCHHHHhhCCC
Confidence 9999999986543
No 384
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=335.52 Aligned_cols=205 Identities=25% Similarity=0.375 Sum_probs=166.5
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+.... ...+.|++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 2 ~l~~~~l~~~y~~~~~---~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~ 77 (287)
T PRK13637 2 SIKIENLTHIYMEGTP---FEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKI-IIDGVDITDKKVK 77 (287)
T ss_pred EEEEEEEEEECCCCCc---cccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEE-EECCEECCCcCcc
Confidence 3789999999974300 01468999 99999999999999999999999999999999999986 6655
Q ss_pred ------EEEEEcCCC--CCCCCcHHHHHhcCCC---CCHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChH
Q 000504 660 ------KKAYVPQSS--WIQTGTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1458)
Q Consensus 660 ------~~ayv~Q~~--~i~~~Ti~enI~fg~~---~~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGG 724 (1458)
.++||+|+| .+++.|++|||.|+.. .+.+ +.+++++.++|.. .+..+....+||||
T Consensus 78 ~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgG 148 (287)
T PRK13637 78 LSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGG 148 (287)
T ss_pred HHHHhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHH
Confidence 369999998 5678899999998742 2222 2334444444430 12245667899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhc-cCCEEEEEeCCeEEEcc
Q 000504 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g 801 (1458)
||||++|||||+.+|+++||||||++||+.+...+.+ ++..+. .++|||+|||+++++. .||+|++|++|++++.|
T Consensus 149 q~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g 227 (287)
T PRK13637 149 QKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILN-KIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQG 227 (287)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 9999999999999999999999999999999888765 455543 3799999999999985 59999999999999999
Q ss_pred cchhhhh
Q 000504 802 KYEDLIA 808 (1458)
Q Consensus 802 ~~~~l~~ 808 (1458)
+.+++.+
T Consensus 228 ~~~~~~~ 234 (287)
T PRK13637 228 TPREVFK 234 (287)
T ss_pred CHHHHHh
Confidence 9988765
No 385
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=335.70 Aligned_cols=203 Identities=26% Similarity=0.390 Sum_probs=166.6
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+.... ...+.|+| ||+|++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 3 l~~~~l~~~y~~~~~---~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~i~~~~~~~ 78 (290)
T PRK13634 3 ITFQKVEHRYQYKTP---FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTV-TIGERVITAGKKNK 78 (290)
T ss_pred EEEEEEEEEECCCCc---ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEE-EECCEECccccccc
Confidence 789999999964300 11468999 99999999999999999999999999999999999987 6665
Q ss_pred -------EEEEEcCCC--CCCCCcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCCh
Q 000504 660 -------KKAYVPQSS--WIQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1458)
Q Consensus 660 -------~~ayv~Q~~--~i~~~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSG 723 (1458)
.++||+|+| .+++.||+|||.|+.. .+. ++.+++++.++|..++ .+.+..+|||
T Consensus 79 ~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSg 148 (290)
T PRK13634 79 KLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL----------LARSPFELSG 148 (290)
T ss_pred hHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh----------hhCCcccCCH
Confidence 269999998 5777899999998742 122 2344455555554322 2356678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEc
Q 000504 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQS 800 (1458)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~ 800 (1458)
|||||++|||||+.+|+++||||||++||+.+...+.+ +++.+. .+.|||++||+++++.. ||+|++|++|++++.
T Consensus 149 Gq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~-~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~ 227 (290)
T PRK13634 149 GQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMME-MFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQ 227 (290)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999887766 455443 37999999999999864 999999999999999
Q ss_pred ccchhhhh
Q 000504 801 GKYEDLIA 808 (1458)
Q Consensus 801 g~~~~l~~ 808 (1458)
|+.+++.+
T Consensus 228 g~~~~~~~ 235 (290)
T PRK13634 228 GTPREIFA 235 (290)
T ss_pred CCHHHHhc
Confidence 99888765
No 386
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-34 Score=325.52 Aligned_cols=197 Identities=32% Similarity=0.439 Sum_probs=161.8
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+. .+.+++ |+++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 3 l~~~~l~~~~~~--------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 73 (239)
T cd03296 3 IEVRNVSKRFGD--------FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTI-LFGGEDATDVPVQE 73 (239)
T ss_pred EEEEeEEEEECC--------EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEECCcCCccc
Confidence 789999999963 368999 99999999999999999999999999999999999986 6665
Q ss_pred -EEEEEcCCCCCCC-CcHHHHHhcCCCC-------CHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHH
Q 000504 660 -KKAYVPQSSWIQT-GTIRENILFGKDM-------RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1458)
Q Consensus 660 -~~ayv~Q~~~i~~-~Ti~enI~fg~~~-------~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 726 (1458)
.++|++|+|.++. .|++||+.++... +.. +.++.++..++. ........+||||||
T Consensus 74 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~ 142 (239)
T cd03296 74 RNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLD-----------WLADRYPAQLSGGQR 142 (239)
T ss_pred cceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCCh-----------hhhhcChhhCCHHHH
Confidence 3799999998874 6999999986432 111 122223333332 123456678999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhcc-CCEEEEEeCCeEEEcccc
Q 000504 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKY 803 (1458)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~ 803 (1458)
||++||||++.+|+++||||||++||+++.+.+.+ ++..+. + ++|+|++||+++.+.. ||+|++|++|++++.|+.
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 221 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRR-WLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTP 221 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCH
Confidence 99999999999999999999999999999877765 555543 3 7899999999998765 999999999999999998
Q ss_pred hhhhh
Q 000504 804 EDLIA 808 (1458)
Q Consensus 804 ~~l~~ 808 (1458)
+++.+
T Consensus 222 ~~~~~ 226 (239)
T cd03296 222 DEVYD 226 (239)
T ss_pred HHHhc
Confidence 88764
No 387
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.7e-34 Score=318.07 Aligned_cols=192 Identities=22% Similarity=0.308 Sum_probs=164.3
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 689999999964 359999999999999999999999999999999999999999999999999875 34567899999
Q ss_pred EccCCCCc-cccHHHhcCcC--CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCC
Q 000504 1288 IPQDPMLF-QGTVRTNLDPL--EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1364 (1458)
Q Consensus 1288 IpQdp~LF-~gTIR~NLdp~--~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1364 (1458)
+||++.++ ..|+++|+... ....++.+.++++..++.+. .|.++ .+||+|||||++||||++++|+
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGITELCRLFSLEHL-------IDYPC----GLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHHHHHHHHcCCchh-------hhCCh----hhcCHHHHHHHHHHHHHhcCCC
Confidence 99999887 46999998632 11233456777777766442 23333 3699999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEE
Q 000504 1365 ILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVL 1413 (1458)
Q Consensus 1365 ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~~DrVl 1413 (1458)
+|+|||||++||..+.+.+.+.|++.. +++|+|++||+...+.+||.-.
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~ 197 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEE 197 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhh
Confidence 999999999999999999999999753 5789999999999999898644
No 388
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.7e-34 Score=319.86 Aligned_cols=195 Identities=22% Similarity=0.262 Sum_probs=167.1
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.++++|++++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNE--EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCC--ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 5999999999964 3599999999999999999999999999999999999999999999999998752 4466899
Q ss_pred EEccCCCCccc-cHHHhcCcC----CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhcc
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPL----EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~----~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr 1361 (1458)
|+||+|.+|.+ |+++|+... +...++.+.++++..++.+. ++..+ .+||+|||||++||||+++
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LS~G~~qrv~laral~~ 154 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGY-------EDTLV----RQLSAGQKKRLALARLWLS 154 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCChhh-------ccCCh----hhCCHHHHHHHHHHHHHhc
Confidence 99999999987 999998532 22234455677777776433 34444 4699999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeC
Q 000504 1362 KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDE 1417 (1458)
Q Consensus 1362 ~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~ 1417 (1458)
+|++|+|||||++||.++.+.+.+.|++.. +++|+|++||+++.+.+ ||++++++.
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 155 PAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999999999998653 46899999999999865 899999875
No 389
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=2.2e-34 Score=323.16 Aligned_cols=198 Identities=25% Similarity=0.362 Sum_probs=163.8
Q ss_pred EEEEeeeEEeCC----C-CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEc--C--eeCCCCCH
Q 000504 1208 IELENLLVQYNP----T-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILID--G--VDISMIGL 1278 (1458)
Q Consensus 1208 I~~~nvs~~Y~~----~-~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~ID--G--~dI~~i~l 1278 (1458)
|+++|++++|+. + .+++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+| | +++..++.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 789999999963 1 2469999999999999999999999999999999999999999999998 4 37766665
Q ss_pred HH---H-hcceEEEccCCCCccc-cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCC
Q 000504 1279 QD---L-RSRLSIIPQDPMLFQG-TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWS 1346 (1458)
Q Consensus 1279 ~~---L-R~~i~iIpQdp~LF~g-TIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1346 (1458)
.. + +++++|+||+|.+|.. |+++|+... .... ++++.++++..++.+... +. .+.+||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~------~~----~~~~LS 151 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLW------HL----PPATFS 151 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh------hC----CcccCC
Confidence 43 3 4679999999988875 999998531 1121 345666777777654221 22 245799
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhh-hcCEEEEE
Q 000504 1347 VGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVI-DNDLVLVL 1415 (1458)
Q Consensus 1347 gGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~-~~DrVlvL 1415 (1458)
+|||||++|||||+++|++|+|||||++||+++.+.+.+.|++.. +++|||+|+|+++.+. -||+|+.+
T Consensus 152 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 152 GGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 999999999999999999999999999999999999999998864 4789999999999886 59999876
No 390
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-34 Score=317.28 Aligned_cols=197 Identities=24% Similarity=0.421 Sum_probs=172.4
Q ss_pred cEEEEeeeEEeCCCC-------CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHH
Q 000504 1207 KIELENLLVQYNPTL-------PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQ 1279 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~-------~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~ 1279 (1458)
-++++|++..|.... -.+++||||+|++||.+||||.|||||||+-++|.|+++|++|+|+++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 478999999996432 26899999999999999999999999999999999999999999999999987765
Q ss_pred HHhcceEEEccCCCCccccHHHhcCcCCCCCHHHHHHHHHHcCcHHH-HHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1280 DLRSRLSIIPQDPMLFQGTVRTNLDPLEQHSDQEIWEVINKCHLAEI-VRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1280 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sdeeI~~aL~~~~L~~~-i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
.+..++++.+.|+++|+.+. ..+-| ..||||||||++||||
T Consensus 82 ---------------------------~~~~~~~v~elL~~Vgl~~~~~~ryP-----------helSGGQrQRi~IARA 123 (268)
T COG4608 82 ---------------------------KEERRERVLELLEKVGLPEEFLYRYP-----------HELSGGQRQRIGIARA 123 (268)
T ss_pred ---------------------------hhHHHHHHHHHHHHhCCCHHHhhcCC-----------cccCchhhhhHHHHHH
Confidence 22345678999999998763 33323 4699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSS 1435 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s 1435 (1458)
|.-+|+++|+|||||+||....++|.+.+++.. .+-|.+.|||+++.+.. ||||.||..|+|||.|+.+++++++..
T Consensus 124 Lal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~p~H 203 (268)
T COG4608 124 LALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSNPLH 203 (268)
T ss_pred HhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhCCCC
Confidence 999999999999999999999999999887643 47899999999999987 999999999999999999999999988
Q ss_pred hHHHHHHH
Q 000504 1436 SFSKLVAE 1443 (1458)
Q Consensus 1436 ~F~~l~~~ 1443 (1458)
.|.+..-+
T Consensus 204 pYTk~Ll~ 211 (268)
T COG4608 204 PYTKALLS 211 (268)
T ss_pred HHHHHHHH
Confidence 88766543
No 391
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.1e-34 Score=323.96 Aligned_cols=194 Identities=28% Similarity=0.409 Sum_probs=158.3
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCc-----cCCCCcEEEECC-----
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEI-----PRISGAAIKVHG----- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~-----~~~~G~~i~~~g----- 659 (1458)
++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|.+ +|.+|++ .++|
T Consensus 1 i~~~~l~~~~~~--------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i-~~~g~~~~~ 71 (227)
T cd03260 1 IELRDLNVYYGD--------KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEV-LLDGKDIYD 71 (227)
T ss_pred CEEEEEEEEcCC--------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEE-EECCEEhhh
Confidence 468899999853 368999 9999999999999999999999999999999 8999986 6655
Q ss_pred ----------EEEEEcCCCCCCCCcHHHHHhcCCCC----C----HHHHHHHHHHhhhhhhHHhhcCCCcccccCC--CC
Q 000504 660 ----------KKAYVPQSSWIQTGTIRENILFGKDM----R----QSFYEEVLEGCALNQDIEMWADGDLSVVGER--GI 719 (1458)
Q Consensus 660 ----------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~----~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~--g~ 719 (1458)
.++|++|++.+++.|++||+.++... . +++.+++++.+++.+.. ..+ +.
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~ 140 (227)
T cd03260 72 LDVDVLELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEV-----------KDRLHAL 140 (227)
T ss_pred cchHHHHHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHH-----------hccCCcc
Confidence 36999999988888999999886421 1 11223334444443222 222 57
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEE
Q 000504 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1458)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~ 798 (1458)
+||||||||++||||++.+|+++||||||++||+.+...+++ ++..+.+++|+|++||+++++.. ||+|++|++|+++
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~ 219 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEE-LIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLV 219 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEE
Confidence 899999999999999999999999999999999999887765 45555444899999999998765 9999999999999
Q ss_pred Ecccchh
Q 000504 799 QSGKYED 805 (1458)
Q Consensus 799 ~~g~~~~ 805 (1458)
+.|+.++
T Consensus 220 ~~g~~~~ 226 (227)
T cd03260 220 EFGPTEQ 226 (227)
T ss_pred EecCccc
Confidence 9988765
No 392
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=343.77 Aligned_cols=199 Identities=27% Similarity=0.395 Sum_probs=165.3
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|.+++|+. ...+++ ||++++|++++|+|||||||||||++|+|.++|++|++ .++|
T Consensus 3 ~l~i~~l~~~~~~--------~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I-~~~g~~i~~~~~~ 73 (369)
T PRK11000 3 SVTLRNVTKAYGD--------VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDL-FIGEKRMNDVPPA 73 (369)
T ss_pred EEEEEEEEEEeCC--------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEE-EECCEECCCCCHh
Confidence 4789999999963 357899 99999999999999999999999999999999999987 6766
Q ss_pred --EEEEEcCCCCCCC-CcHHHHHhcCCCC---CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 660 --KKAYVPQSSWIQT-GTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 660 --~~ayv~Q~~~i~~-~Ti~enI~fg~~~---~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
.++|++|++.++. .||+|||.|+... +. ++.+++++.+++.. ..+....+|||||||||
T Consensus 74 ~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-----------~~~~~~~~LSgGq~QRv 142 (369)
T PRK11000 74 ERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAH-----------LLDRKPKALSGGQRQRV 142 (369)
T ss_pred HCCEEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChh-----------hhcCChhhCCHHHHHHH
Confidence 3799999998875 6999999987532 21 23344444444432 23355678999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchhh
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDL 806 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 806 (1458)
+|||||+.+|+++||||||++||+.....+.+. ++.+. + ++|+|+||||++++.. ||+|++|++|++.+.|+++++
T Consensus 143 aLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i 221 (369)
T PRK11000 143 AIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIE-ISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLEL 221 (369)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999999998877664 44443 3 7899999999998765 999999999999999999998
Q ss_pred hhh
Q 000504 807 IAD 809 (1458)
Q Consensus 807 ~~~ 809 (1458)
...
T Consensus 222 ~~~ 224 (369)
T PRK11000 222 YHY 224 (369)
T ss_pred HhC
Confidence 763
No 393
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=360.19 Aligned_cols=207 Identities=25% Similarity=0.375 Sum_probs=175.8
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCH-HHHhcce
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL-QDLRSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l-~~LR~~i 1285 (1458)
.|+++|++++|+. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. +.+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 359999999999999999999999999999999999999999999999999976543 3468899
Q ss_pred EEEccCCCCccc-cHHHhcCcCC-----C-CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHH
Q 000504 1286 SIIPQDPMLFQG-TVRTNLDPLE-----Q-HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVC 1354 (1458)
Q Consensus 1286 ~iIpQdp~LF~g-TIR~NLdp~~-----~-~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1354 (1458)
+|+||+|.+|.+ |+++|+.... . .. ++++.++++.+++.+ .++..+ .+||||||||++
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~----~~LSgGq~qrv~ 150 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDI-------DPDTPL----KYLSIGQRQMVE 150 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCC-------CcCCch----hhCCHHHHHHHH
Confidence 999999998876 9999996421 1 11 234566677766532 223333 469999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000504 1355 LARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSP 1426 (1458)
Q Consensus 1355 LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p 1426 (1458)
|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.+++
T Consensus 151 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 151 IAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred HHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999999999998753 46899999999999866 999999999999876654
No 394
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.7e-34 Score=326.07 Aligned_cols=202 Identities=27% Similarity=0.393 Sum_probs=165.0
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCC-----CCcEEEECC----
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRI-----SGAAIKVHG---- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~-----~G~~i~~~g---- 659 (1458)
.++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|.++|+ +|++ .++|
T Consensus 1 ~l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i-~~~g~~~~ 71 (247)
T TIGR00972 1 AIEIENLNLFYGE--------KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKV-LFDGQDIY 71 (247)
T ss_pred CEEEEEEEEEECC--------eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEE-EECCEEcc
Confidence 3688999999963 257899 9999999999999999999999999999999988 9986 5544
Q ss_pred -----------EEEEEcCCCCCCCCcHHHHHhcCCCC----CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++|++|+++++..|++||+.++... .. ++.+++++..++.++++ ...+....+
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 144 (247)
T TIGR00972 72 DKKIDVVELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALG 144 (247)
T ss_pred ccccchHHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCccc
Confidence 37999999998889999999875321 11 12233344444432221 224566789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
||||||||++||||++.+|+++||||||++||+.+...+++ ++..+.+++|+|++||+++.+.. ||+|++|++|++++
T Consensus 145 LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 223 (247)
T TIGR00972 145 LSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEE-LIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVE 223 (247)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999877765 56655556899999999998865 99999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+.+++..
T Consensus 224 ~~~~~~~~~ 232 (247)
T TIGR00972 224 YGPTEQIFT 232 (247)
T ss_pred eCCHHHHHh
Confidence 999888765
No 395
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.9e-34 Score=340.88 Aligned_cols=202 Identities=27% Similarity=0.370 Sum_probs=166.9
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCC--CcEEEECC------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRIS--GAAIKVHG------ 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~--G~~i~~~g------ 659 (1458)
..++++|++++|.. ...+++ ||++++|++++|+|||||||||||++|+|+.+|++ |++ .++|
T Consensus 4 ~~l~~~~l~~~~~~--------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i-~~~g~~~~~~ 74 (362)
T TIGR03258 4 GGIRIDHLRVAYGA--------NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRI-AIADRDLTHA 74 (362)
T ss_pred eEEEEEEEEEEECC--------eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEE-EECCEECCCC
Confidence 35899999999963 357999 99999999999999999999999999999999999 986 7766
Q ss_pred -----EEEEEcCCCCCCC-CcHHHHHhcCCCC---CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHH
Q 000504 660 -----KKAYVPQSSWIQT-GTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1458)
Q Consensus 660 -----~~ayv~Q~~~i~~-~Ti~enI~fg~~~---~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 726 (1458)
.++||+|++.++. .||+|||.|+... .. .+.+++++..+|.+. ...+..+||||||
T Consensus 75 ~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~-----------~~~~~~~LSgGq~ 143 (362)
T TIGR03258 75 PPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDA-----------AAHLPAQLSGGMQ 143 (362)
T ss_pred CHHHCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCch-----------hhCChhhCCHHHH
Confidence 3799999998875 5999999987532 21 233344444444322 3456679999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhC--CcEEEEEecccchhcc-CCEEEEEeCCeEEEcccc
Q 000504 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLS--QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKY 803 (1458)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~--~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~ 803 (1458)
|||+|||||..+|+++|||||||+||+....++.+.+..-..+ +.|+|+||||++++.. ||+|++|++|++++.|++
T Consensus 144 QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~ 223 (362)
T TIGR03258 144 QRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEP 223 (362)
T ss_pred HHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 9999999999999999999999999999988887654332223 6899999999999765 999999999999999999
Q ss_pred hhhhhhc
Q 000504 804 EDLIADQ 810 (1458)
Q Consensus 804 ~~l~~~~ 810 (1458)
+++....
T Consensus 224 ~~~~~~p 230 (362)
T TIGR03258 224 QALYDAP 230 (362)
T ss_pred HHHHhCc
Confidence 9997643
No 396
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.7e-34 Score=325.18 Aligned_cols=201 Identities=21% Similarity=0.340 Sum_probs=160.3
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|.+++|+. .+.+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 71 (236)
T cd03219 1 LEVRGLTKRFGG--------LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSV-LFDGEDITGLPPHE 71 (236)
T ss_pred CeeeeeEEEECC--------EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceE-EECCEECCCCCHHH
Confidence 367899999863 358899 99999999999999999999999999999999999986 6655
Q ss_pred ----EEEEEcCCCCCCCC-cHHHHHhcCCCCC-------------HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCC
Q 000504 660 ----KKAYVPQSSWIQTG-TIRENILFGKDMR-------------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINL 721 (1458)
Q Consensus 660 ----~~ayv~Q~~~i~~~-Ti~enI~fg~~~~-------------~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~L 721 (1458)
.++|++|++.++.. |++||+.++.... ....++ ...+-++.+ |-....+....+|
T Consensus 72 ~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~L 144 (236)
T cd03219 72 IARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARE-----RAEELLERV--GLADLADRPAGEL 144 (236)
T ss_pred HHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHH-----HHHHHHHHc--CccchhhCChhhC
Confidence 27999999887664 9999998864211 111110 011112222 2122345677899
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 722 SGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 722 SGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
|||||||++||||++.+|+++||||||++||+.+...+.+ .+..+. +++|+|++||+++++.. ||+|++|++|++.+
T Consensus 145 SgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~ 223 (236)
T cd03219 145 SYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAE-LIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIA 223 (236)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe
Confidence 9999999999999999999999999999999999887776 454443 68999999999999865 99999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+++++..
T Consensus 224 ~~~~~~~~~ 232 (236)
T cd03219 224 EGTPDEVRN 232 (236)
T ss_pred ecCHHHhcc
Confidence 998887754
No 397
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=327.34 Aligned_cols=203 Identities=24% Similarity=0.360 Sum_probs=165.7
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCcc-----CCCCcEEEECC---
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG--- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g--- 659 (1458)
..++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|+.+ |++|++ .++|
T Consensus 5 ~~l~~~~l~~~~~~--------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i-~~~g~~i 75 (253)
T PRK14242 5 PKMEARGLSFFYGD--------FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEI-LLDGENI 75 (253)
T ss_pred cEEEEeeeEEEECC--------eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEE-EECCEEc
Confidence 46899999999963 358999 99999999999999999999999999999864 578986 5554
Q ss_pred ------------EEEEEcCCCCCCCCcHHHHHhcCCCC----C----HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCC
Q 000504 660 ------------KKAYVPQSSWIQTGTIRENILFGKDM----R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1458)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~----~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~ 719 (1458)
.++|++|++.++..|++||+.++... . +++.++.++.+++.+.+. +..+....
T Consensus 76 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~ 148 (253)
T PRK14242 76 YDPHVDVVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESAL 148 (253)
T ss_pred cccccCHHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcc
Confidence 37999999988888999999986321 1 122333444444432221 23456778
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEE
Q 000504 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1458)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~ 798 (1458)
+|||||||||+||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++.. ||+|++|++|+++
T Consensus 149 ~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~ 227 (253)
T PRK14242 149 GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEE-LIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLI 227 (253)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999998777765 55555567899999999999865 9999999999999
Q ss_pred Ecccchhhhh
Q 000504 799 QSGKYEDLIA 808 (1458)
Q Consensus 799 ~~g~~~~l~~ 808 (1458)
+.|+.+++..
T Consensus 228 ~~g~~~~~~~ 237 (253)
T PRK14242 228 EVGPTEQIFT 237 (253)
T ss_pred EeCCHHHHHc
Confidence 9999888765
No 398
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.8e-34 Score=317.03 Aligned_cols=193 Identities=26% Similarity=0.362 Sum_probs=166.9
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. . ..|+++++
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~-~~~~~~~~ 77 (207)
T PRK13539 3 LEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--P-DVAEACHY 77 (207)
T ss_pred EEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--h-hhHhhcEE
Confidence 789999999964 359999999999999999999999999999999999999999999999998753 2 28889999
Q ss_pred EccCCCCc-cccHHHhcCcC---CCCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCC
Q 000504 1288 IPQDPMLF-QGTVRTNLDPL---EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1363 (1458)
Q Consensus 1288 IpQdp~LF-~gTIR~NLdp~---~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1363 (1458)
+||++.++ ..|+++|+... ....++++.++++..++.+... .++ ..||+|||||++||||++++|
T Consensus 78 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~LS~G~~qrl~la~al~~~p 146 (207)
T PRK13539 78 LGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAPLAH-------LPF----GYLSAGQKRRVALARLLVSNR 146 (207)
T ss_pred ecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHc-------CCh----hhcCHHHHHHHHHHHHHhcCC
Confidence 99988765 57999998632 2234567889999999876432 222 369999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecChhhhhhcCEEEEEeC
Q 000504 1364 RILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAHRIPTVIDNDLVLVLDE 1417 (1458)
Q Consensus 1364 ~ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAHrl~ti~~~DrVlvL~~ 1417 (1458)
++|+|||||++||+.+.+.+.+.|++. .+++|+|++||+++.+.. |+++.++.
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 147 PIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 999999999999999999999999874 357899999999999887 99988754
No 399
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=333.77 Aligned_cols=204 Identities=23% Similarity=0.355 Sum_probs=164.6
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.|+++|++++|+.... ...+.+++ ||+|++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 2 ~i~~~~l~~~y~~~~~---~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i-~~~g~~~~~~~~~ 77 (305)
T PRK13651 2 QIKVKNIVKIFNKKLP---TELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTI-EWIFKDEKNKKKT 77 (305)
T ss_pred EEEEEEEEEEECCCCC---ccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEE-EEeceeccccccc
Confidence 3789999999974300 11358999 99999999999999999999999999999999999986 5532
Q ss_pred ----------------------------EEEEEcCCC--CCCCCcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhh
Q 000504 660 ----------------------------KKAYVPQSS--WIQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQD 702 (1458)
Q Consensus 660 ----------------------------~~ayv~Q~~--~i~~~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~d 702 (1458)
.++||+|+| .++..||+|||.|+.. .++ ++.+++++.++|..+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~ 157 (305)
T PRK13651 78 KEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDES 157 (305)
T ss_pred ccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh
Confidence 269999986 4677899999999753 222 223334444444321
Q ss_pred HHhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccc
Q 000504 703 IEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLE 781 (1458)
Q Consensus 703 l~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~ 781 (1458)
..+....+||||||||++|||||+.+|+++||||||++||+.....+.+ .+..+ ..++|||+||||++
T Consensus 158 ----------~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivtHd~~ 226 (305)
T PRK13651 158 ----------YLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILE-IFDNLNKQGKTIILVTHDLD 226 (305)
T ss_pred ----------hhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHCCCEEEEEeeCHH
Confidence 1345678999999999999999999999999999999999998777765 44444 34899999999999
Q ss_pred hhc-cCCEEEEEeCCeEEEcccchhhhh
Q 000504 782 FLD-AADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 782 ~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
++. .||+|++|++|++++.|+.+++..
T Consensus 227 ~~~~~adrv~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 227 NVLEWTKRTIFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred HHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 875 599999999999999999988765
No 400
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.7e-34 Score=315.04 Aligned_cols=192 Identities=21% Similarity=0.326 Sum_probs=164.4
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... .+.|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGE--RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 578999999964 35999999999999999999999999999999999999999999999999998765 457789999
Q ss_pred EccCCCCcc-ccHHHhcCcCC---CCCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCC
Q 000504 1288 IPQDPMLFQ-GTVRTNLDPLE---QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKK 1363 (1458)
Q Consensus 1288 IpQdp~LF~-gTIR~NLdp~~---~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~ 1363 (1458)
+||++.+|. .|+++|+.... ...++++.++++..++.+.. +..+ .+||+|||||++||||++++|
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrv~la~al~~~p 146 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLTGFE-------DLPA----AQLSAGQQRRLALARLWLSRA 146 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCCHHHh-------cCCh----hhcCHHHHHHHHHHHHHhcCC
Confidence 999998886 59999985321 11244688899999987654 2333 469999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecChhhhhhcCEEEE
Q 000504 1364 RILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAHRIPTVIDNDLVLV 1414 (1458)
Q Consensus 1364 ~ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAHrl~ti~~~DrVlv 1414 (1458)
++|+|||||++||..+.+.+.+.|++. .++.|+|+++|+... ..||+++.
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~-~~~~~~~~ 197 (198)
T TIGR01189 147 PLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLG-LVEARELR 197 (198)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccc-ccceEEee
Confidence 999999999999999999999999875 357899999999854 34677765
No 401
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=4.2e-34 Score=339.14 Aligned_cols=199 Identities=34% Similarity=0.472 Sum_probs=164.8
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+. ...+++ ||++++||+++|+|||||||||||++|+|+++|++|++ .++|
T Consensus 2 ~L~i~~l~~~~~~--------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I-~i~g~~i~~~~~~ 72 (353)
T PRK10851 2 SIEIANIKKSFGR--------TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHI-RFHGTDVSRLHAR 72 (353)
T ss_pred EEEEEEEEEEeCC--------eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEECCCCCHH
Confidence 3789999999963 357899 99999999999999999999999999999999999986 7766
Q ss_pred --EEEEEcCCCCCCC-CcHHHHHhcCCCC-------CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 --KKAYVPQSSWIQT-GTIRENILFGKDM-------RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 --~~ayv~Q~~~i~~-~Ti~enI~fg~~~-------~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
.++||+|++.++. .|++|||.|+... +. ++.+++++..++.+ ....+..+|||||
T Consensus 73 ~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----------~~~~~~~~LSgGq 141 (353)
T PRK10851 73 DRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAH-----------LADRYPAQLSGGQ 141 (353)
T ss_pred HCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCch-----------hhhCChhhCCHHH
Confidence 3799999998875 6999999997532 11 12223333333321 2345677999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhcc-CCEEEEEeCCeEEEccc
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~ 802 (1458)
||||+|||||+.+|+++||||||++||+.+...+.+. ++.+. + ++|+|+||||++++.. ||+|++|++|++++.|+
T Consensus 142 ~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~ 220 (353)
T PRK10851 142 KQRVALARALAVEPQILLLDEPFGALDAQVRKELRRW-LRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGT 220 (353)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcC
Confidence 9999999999999999999999999999998888764 44443 3 7899999999999765 99999999999999999
Q ss_pred chhhhhh
Q 000504 803 YEDLIAD 809 (1458)
Q Consensus 803 ~~~l~~~ 809 (1458)
++++...
T Consensus 221 ~~~i~~~ 227 (353)
T PRK10851 221 PDQVWRE 227 (353)
T ss_pred HHHHHhC
Confidence 9998763
No 402
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-34 Score=319.54 Aligned_cols=190 Identities=32% Similarity=0.427 Sum_probs=155.1
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i-~~~g~~~~~~~~~~ 71 (213)
T cd03259 1 LELKGLSKTYGS--------VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEI-LIDGRDVTGVPPER 71 (213)
T ss_pred CeeeeeEEEeCC--------eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEE-EECCEEcCcCchhh
Confidence 467899999863 368999 99999999999999999999999999999999999987 6665
Q ss_pred -EEEEEcCCCCCC-CCcHHHHHhcCCCC---CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHH
Q 000504 660 -KKAYVPQSSWIQ-TGTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1458)
Q Consensus 660 -~~ayv~Q~~~i~-~~Ti~enI~fg~~~---~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 730 (1458)
.++|++|++.++ +.|++||+.++... +. ++.++.++.+++.+ .......+||||||||++
T Consensus 72 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrl~ 140 (213)
T cd03259 72 RNIGMVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEG-----------LLNRYPHELSGGQQQRVA 140 (213)
T ss_pred ccEEEEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChh-----------hhhcChhhCCHHHHHHHH
Confidence 379999998776 46999999876431 21 12333444444432 234556789999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
||||+..+|+++||||||++||+.+...+.+ ++..+. .++|+|++||+++++.. ||+|++|++|++++.|
T Consensus 141 la~al~~~p~~lllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 141 LARALAREPSLLLLDEPLSALDAKLREELRE-ELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999887765 455443 37999999999999765 9999999999998765
No 403
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-34 Score=322.12 Aligned_cols=199 Identities=27% Similarity=0.397 Sum_probs=165.5
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 3 ~l~~~~l~~~~~~--------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~i~~~~~~ 73 (241)
T PRK14250 3 EIEFKEVSYSSFG--------KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSI-LIDGVDIKTIDVI 73 (241)
T ss_pred eEEEEeEEEEeCC--------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEEhhhcChH
Confidence 4789999999853 358899 99999999999999999999999999999999999987 6665
Q ss_pred ----EEEEEcCCCCCCCCcHHHHHhcCCCCC---HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHH
Q 000504 660 ----KKAYVPQSSWIQTGTIRENILFGKDMR---QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLA 732 (1458)
Q Consensus 660 ----~~ayv~Q~~~i~~~Ti~enI~fg~~~~---~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 732 (1458)
.++|++|++.++..|++||+.++.... ..+..+.++.+++..+. ......+||||||||++||
T Consensus 74 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la 143 (241)
T PRK14250 74 DLRRKIGMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIA 143 (241)
T ss_pred HhhhcEEEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHH
Confidence 379999999988889999999864322 23334455555543221 2346778999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchhhhh
Q 000504 733 RAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 733 RAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
||++.+|+++||||||++||+.+...+.+ ++..+. .++|+|++||+++++.. ||+|++|++|++++.|+.+++..
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 144 RTLANNPEVLLLDEPTSALDPTSTEIIEE-LIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 99999999999999999999998777665 455443 37999999999999875 99999999999999999888765
No 404
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.1e-34 Score=314.63 Aligned_cols=188 Identities=26% Similarity=0.404 Sum_probs=159.5
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1458)
..++++|++++|+.. ..+.+++ |+++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 5 ~~l~~~~l~~~~~~~------~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~ 77 (207)
T cd03369 5 GEIEVENLSVRYAPD------LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKI-EIDGIDISTIPL 77 (207)
T ss_pred CeEEEEEEEEEeCCC------CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeE-EECCEEhHHCCH
Confidence 458999999999742 2468999 99999999999999999999999999999999999987 6665
Q ss_pred -----EEEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHH
Q 000504 660 -----KKAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARA 734 (1458)
Q Consensus 660 -----~~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 734 (1458)
.++|++|+|.++++|++||+.+..+++.+. +.+.+. ++++..+||||||||++||||
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~---~~~~l~---------------~~~~~~~LS~G~~qrv~lara 139 (207)
T cd03369 78 EDLRSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEE---IYGALR---------------VSEGGLNLSQGQRQLLCLARA 139 (207)
T ss_pred HHHHhhEEEEecCCcccCccHHHHhcccCCCCHHH---HHHHhh---------------ccCCCCcCCHHHHHHHHHHHH
Confidence 479999999998899999998765443322 222211 346778999999999999999
Q ss_pred HccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEccc
Q 000504 735 VYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 735 l~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~ 802 (1458)
++.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++.+..||++++|++|++.+.|+
T Consensus 140 l~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 140 LLKRPRVLVLDEATASIDYATDALIQK-TIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred HhhCCCEEEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 999999999999999999998777655 5555556899999999999987799999999999988775
No 405
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.9e-34 Score=389.27 Aligned_cols=215 Identities=22% Similarity=0.355 Sum_probs=188.9
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceE
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLS 1286 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~ 1286 (1458)
.|+++|++++|+++...+++|+||++++||.+||+|+||||||||+++|.|+++|++|+|.++|.|+.. ...+.|++++
T Consensus 928 ~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~IG 1006 (2272)
T TIGR01257 928 GVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSLG 1006 (2272)
T ss_pred eEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcEE
Confidence 599999999996434569999999999999999999999999999999999999999999999999975 5677899999
Q ss_pred EEccCCCCccc-cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHH
Q 000504 1287 IIPQDPMLFQG-TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARV 1358 (1458)
Q Consensus 1287 iIpQdp~LF~g-TIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1358 (1458)
++||++.+|+. |++|||..+ ...+ ++++.+.++.++|.+.. |..+ .+||||||||++||||
T Consensus 1007 ~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~-------~~~~----~~LSGGqKQRLsLArA 1075 (2272)
T TIGR01257 1007 MCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKR-------NEEA----QDLSGGMQRKLSVAIA 1075 (2272)
T ss_pred EEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-------cCCh----hhCCHHHHHHHHHHHH
Confidence 99999999975 999999642 1122 24567778888775432 3333 4699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 000504 1359 LLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDN 1433 (1458)
Q Consensus 1359 LLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~ 1433 (1458)
|+.+|+||+||||||+||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++.+|.++-
T Consensus 1076 Li~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~ 1151 (2272)
T TIGR01257 1076 FVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCF 1151 (2272)
T ss_pred HHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhc
Confidence 99999999999999999999999999999998778999999999999865 9999999999999999999997643
No 406
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=331.02 Aligned_cols=201 Identities=28% Similarity=0.427 Sum_probs=166.3
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+.. ...+.|+| ||+|++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 4 ~l~~~~l~~~~~~~-----~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~i~~~~~~ 77 (279)
T PRK13650 4 IIEVKNLTFKYKED-----QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQI-IIDGDLLTEENVW 77 (279)
T ss_pred eEEEEeEEEEcCCC-----CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE-EECCEECCcCcHH
Confidence 48899999999743 12458999 99999999999999999999999999999999999986 6766
Q ss_pred ----EEEEEcCCCC--CCCCcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHH
Q 000504 660 ----KKAYVPQSSW--IQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1458)
Q Consensus 660 ----~~ayv~Q~~~--i~~~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 726 (1458)
.++|++|+|. ++..||+|||.|+.. .++ ++.+++++..+|... ......+||||||
T Consensus 78 ~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~ 146 (279)
T PRK13650 78 DIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDF-----------KEREPARLSGGQK 146 (279)
T ss_pred HHHhhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhH-----------hhCCcccCCHHHH
Confidence 3699999984 567799999998743 222 233444555555322 2345679999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhccCCEEEEEeCCeEEEcccch
Q 000504 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYE 804 (1458)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~ 804 (1458)
||++||||++.+|+++||||||++||+.+.+.+.+ ++..+. + ++|+|++||+++.+..||+|++|++|+++..|+.+
T Consensus 147 qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~ 225 (279)
T PRK13650 147 QRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIK-TIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPR 225 (279)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999998877765 455543 3 89999999999998779999999999999999988
Q ss_pred hhhh
Q 000504 805 DLIA 808 (1458)
Q Consensus 805 ~l~~ 808 (1458)
++..
T Consensus 226 ~~~~ 229 (279)
T PRK13650 226 ELFS 229 (279)
T ss_pred HHHc
Confidence 8765
No 407
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-34 Score=298.44 Aligned_cols=213 Identities=28% Similarity=0.443 Sum_probs=184.5
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+.+|++++-.. ..+|+|+||+++|||.+||+||||||||||+++|.|...|++|++.++|.++++.+..++-++-++
T Consensus 2 i~a~nls~~~~G--r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLAG--RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEeec--ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 678899877643 458999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCC-ccccHHHhcC----cCC---CCCHHH--HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1288 IPQDPML-FQGTVRTNLD----PLE---QHSDQE--IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1288 IpQdp~L-F~gTIR~NLd----p~~---~~sdee--I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
.||+..+ |.-|++|-+. |.+ +..+++ ..+++.++.+..+-.+. . ..|||||+||+.|||
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~-----y------~~LSGGEqQRVqlAR 148 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRD-----Y------RTLSGGEQQRVQLAR 148 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccc-----h------hhcCchHHHHHHHHH
Confidence 9999865 8889999875 442 222444 67889999887664321 1 359999999999999
Q ss_pred Hhcc------CCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhh-hhcCEEEEEeCCEEEEecChhHH
Q 000504 1358 VLLK------KKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTV-IDNDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1358 ALLr------~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti-~~~DrVlvL~~G~ivE~g~p~~L 1429 (1458)
+|.+ .+++|+||||||+||..-...+.++.|+.. .++.|++|=|+++.. +.||||++|.+||++..|+|++.
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~v 228 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDV 228 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHh
Confidence 9975 346999999999999999999999999865 568999999999986 55999999999999999999999
Q ss_pred hhcC
Q 000504 1430 LEDN 1433 (1458)
Q Consensus 1430 l~~~ 1433 (1458)
+..+
T Consensus 229 lt~E 232 (259)
T COG4559 229 LTDE 232 (259)
T ss_pred cCHH
Confidence 8643
No 408
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-34 Score=314.43 Aligned_cols=203 Identities=25% Similarity=0.415 Sum_probs=181.2
Q ss_pred ceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHh----cceEEEccCCCCccc-c
Q 000504 1224 VLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLR----SRLSIIPQDPMLFQG-T 1298 (1458)
Q Consensus 1224 vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR----~~i~iIpQdp~LF~g-T 1298 (1458)
-++|+||+|+.||+..|.|-||||||||+.++-|++||++|+|++||.||..++..+|| +++++|.|.--||+. |
T Consensus 43 Gv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrt 122 (386)
T COG4175 43 GVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRT 122 (386)
T ss_pred eeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchh
Confidence 47899999999999999999999999999999999999999999999999999988764 589999999999976 9
Q ss_pred HHHhcCcCCC---CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCc
Q 000504 1299 VRTNLDPLEQ---HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEA 1371 (1458)
Q Consensus 1299 IR~NLdp~~~---~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEa 1371 (1458)
|-+|..+.-+ .+ .+...++|+.+||.++-.+.|+ .||||++||+.|||||..+|+||++|||
T Consensus 123 Vl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~-----------eLSGGMqQRVGLARAla~~~~IlLMDEa 191 (386)
T COG4175 123 VLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN-----------ELSGGMQQRVGLARALANDPDILLMDEA 191 (386)
T ss_pred HhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc-----------cccchHHHHHHHHHHHccCCCEEEecCc
Confidence 9999865421 22 3446789999999999877764 5899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhc--CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChH
Q 000504 1372 TASIDTATDNVIQQTIREET--SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLEDNSSSF 1437 (1458)
Q Consensus 1372 TsslD~~Td~~Iq~~I~~~~--~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~~~s~F 1437 (1458)
.|+|||--...+|+-|.+.. -++||++|||+++.... -|||..|++|+|+..|+|+|++.+|.-.|
T Consensus 192 FSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~ivQ~Gtp~eIl~~PAndY 260 (386)
T COG4175 192 FSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGEIVQVGTPEEILLNPANDY 260 (386)
T ss_pred hhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCeEEEeCCHHHHHcCccHHH
Confidence 99999999999999887643 36899999999998755 99999999999999999999998876544
No 409
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=331.11 Aligned_cols=197 Identities=29% Similarity=0.420 Sum_probs=163.7
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+.. .+.++| ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 4 ~l~~~~l~~~~~~~-------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~ 75 (274)
T PRK13647 4 IIEVEDLHFRYKDG-------TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRV-KVMGREVNAENEK 75 (274)
T ss_pred eEEEEEEEEEeCCC-------CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEE-EECCEECCCCCHH
Confidence 58899999999632 358999 99999999999999999999999999999999999987 6766
Q ss_pred ----EEEEEcCCC--CCCCCcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHH
Q 000504 660 ----KKAYVPQSS--WIQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1458)
Q Consensus 660 ----~~ayv~Q~~--~i~~~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 726 (1458)
.++|++|+| .++..|++||+.|+.. .+. ++++++++.+++.+. ......+||||||
T Consensus 76 ~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LSgG~~ 144 (274)
T PRK13647 76 WVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDF-----------RDKPPYHLSYGQK 144 (274)
T ss_pred HHHhhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHH-----------hcCChhhCCHHHH
Confidence 379999998 5678899999998743 221 234445555555322 2345568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhc-cCCEEEEEeCCeEEEcccch
Q 000504 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYE 804 (1458)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~ 804 (1458)
||++||||+..+|+++||||||++||+.+...+.+ ++..+ .+++|+|++||+++++. .||+|++|++|++++.|+.+
T Consensus 145 qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 223 (274)
T PRK13647 145 KRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLME-ILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKS 223 (274)
T ss_pred HHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999888765 45444 34899999999999985 59999999999999999986
Q ss_pred hh
Q 000504 805 DL 806 (1458)
Q Consensus 805 ~l 806 (1458)
++
T Consensus 224 ~~ 225 (274)
T PRK13647 224 LL 225 (274)
T ss_pred Hh
Confidence 54
No 410
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=6e-34 Score=362.70 Aligned_cols=199 Identities=28% Similarity=0.374 Sum_probs=170.3
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCC--CcEEEEcCeeCCCCCHHHHhcceEEEccCCCCccc-c
Q 000504 1222 PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPS--GGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQG-T 1298 (1458)
Q Consensus 1222 ~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~--~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~g-T 1298 (1458)
..+|+|+|+++++||++||+||||||||||+++|.|+.+|. +|+|.+||.++. ...+++++||||++.+|.. |
T Consensus 81 ~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~----~~~~~~i~yv~Q~~~l~~~lT 156 (659)
T PLN03211 81 RTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPT----KQILKRTGFVTQDDILYPHLT 156 (659)
T ss_pred CeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECc----hhhccceEEECcccccCCcCC
Confidence 45999999999999999999999999999999999999885 899999999874 2456789999999999965 9
Q ss_pred HHHhcCcC------CCCCHHH----HHHHHHHcCcHHHHHhcccccCccccCC-CCCCChhHHHHHHHHHHhccCCCEEE
Q 000504 1299 VRTNLDPL------EQHSDQE----IWEVINKCHLAEIVRQDQRLLDAPVAED-GENWSVGQRQLVCLARVLLKKKRILV 1367 (1458)
Q Consensus 1299 IR~NLdp~------~~~sdee----I~~aL~~~~L~~~i~~lp~gLdt~v~e~-G~nLSgGQrQrl~LARALLr~~~ILl 1367 (1458)
+|||+... ...++++ +.+.++..+|.+ ..|+.+++. ...||||||||++|||||+++|+||+
T Consensus 157 V~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~-------~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLl 229 (659)
T PLN03211 157 VRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTK-------CENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLI 229 (659)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChh-------hcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEE
Confidence 99999631 1234433 445556665543 457878653 57899999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhh-h-hhcCEEEEEeCCEEEEecChhHHhh
Q 000504 1368 LDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPT-V-IDNDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1368 LDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~t-i-~~~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
|||||++||+.+...+.+.|++.. +++|||+++|+++. + ..||+|++|++|++++.|+++++.+
T Consensus 230 LDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~ 296 (659)
T PLN03211 230 LDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMA 296 (659)
T ss_pred EeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHH
Confidence 999999999999999999999864 58999999999984 4 5599999999999999999999874
No 411
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-34 Score=324.25 Aligned_cols=202 Identities=22% Similarity=0.344 Sum_probs=167.6
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCcc---CCCCcEEEECC------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP---RISGAAIKVHG------ 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~---~~~G~~i~~~g------ 659 (1458)
.|+++|+++.|+. .+.+++ ||++++||+++|+|+||||||||+++|+|+.+ |++|++ .++|
T Consensus 2 ~~~~~~l~~~~~~--------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i-~~~g~~i~~~ 72 (246)
T PRK14269 2 IAKTTNLNLFYGK--------KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLV-EIEGKDVKNQ 72 (246)
T ss_pred ceeeeeeEEEECC--------EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEE-EECCEecccC
Confidence 4789999999963 368999 99999999999999999999999999999974 689986 6665
Q ss_pred -------EEEEEcCCCCCCCCcHHHHHhcCCCC---------CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCCh
Q 000504 660 -------KKAYVPQSSWIQTGTIRENILFGKDM---------RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1458)
Q Consensus 660 -------~~ayv~Q~~~i~~~Ti~enI~fg~~~---------~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSG 723 (1458)
.++|++|++.++..|++||+.++... .+++.+++++.+++.+.+.. ...+++.+|||
T Consensus 73 ~~~~~~~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 145 (246)
T PRK14269 73 DVVALRKNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSG 145 (246)
T ss_pred CHHHHhhhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCH
Confidence 37999999999889999999876321 11233455566666443322 23456789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEEccc
Q 000504 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~ 802 (1458)
|||||++||||++++|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 146 G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~ 224 (246)
T PRK14269 146 GQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEE-LLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGE 224 (246)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECC
Confidence 99999999999999999999999999999998777655 56555568999999999999865 99999999999999999
Q ss_pred chhhhh
Q 000504 803 YEDLIA 808 (1458)
Q Consensus 803 ~~~l~~ 808 (1458)
.+++..
T Consensus 225 ~~~~~~ 230 (246)
T PRK14269 225 SKEFFE 230 (246)
T ss_pred HHHHHh
Confidence 888765
No 412
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=358.33 Aligned_cols=208 Identities=20% Similarity=0.340 Sum_probs=174.3
Q ss_pred EEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCH-HHHhcceEEE
Q 000504 1210 LENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGL-QDLRSRLSII 1288 (1458)
Q Consensus 1210 ~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l-~~LR~~i~iI 1288 (1458)
++|++++|++ .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+|++++|+
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999964 359999999999999999999999999999999999999999999999999976654 3467889999
Q ss_pred ccCCCCccc-cHHHhcCcCC----C--CCHH----HHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1289 PQDPMLFQG-TVRTNLDPLE----Q--HSDQ----EIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1289 pQdp~LF~g-TIR~NLdp~~----~--~sde----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
||+|.+|.. |+++|+.... . .+.+ ++.++++.+++. ........+||||||||++|||
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGq~qrv~lA~ 147 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDID-----------IDPRAKVATLSVSQMQMIEIAK 147 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCC-----------CCccCchhhCCHHHHHHHHHHH
Confidence 999987765 9999996321 1 1222 344455555442 2222334579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 148 AFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred HHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 9999999999999999999999999999998753 46899999999999865 9999999999999999988864
No 413
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-34 Score=324.88 Aligned_cols=203 Identities=26% Similarity=0.378 Sum_probs=165.1
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC-----CCCcEEEECC---
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG--- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g--- 659 (1458)
..++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|+++| ++|++ .++|
T Consensus 6 ~~l~~~~l~~~~~~--------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i-~~~g~~i 76 (254)
T PRK14273 6 AIIETENLNLFYTD--------FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNV-IYEGKNI 76 (254)
T ss_pred ceEEEeeeEEEeCC--------ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEE-EECCEec
Confidence 36899999999963 357899 999999999999999999999999999999987 48886 5544
Q ss_pred ------------EEEEEcCCCCCCCCcHHHHHhcCCCC----CHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCC
Q 000504 660 ------------KKAYVPQSSWIQTGTIRENILFGKDM----RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1458)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~ 719 (1458)
.++|++|++.+++.|++|||.++... +.. +.++.++.+++...+. .....++.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~ 149 (254)
T PRK14273 77 YSNNFDILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK-------DKLNTNAL 149 (254)
T ss_pred ccccccHHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH-------HHHhCCcc
Confidence 37999999998889999999987421 111 2223333333322111 12345678
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEE
Q 000504 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1458)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~ 798 (1458)
+||||||||++||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++.. ||+|++|++|+++
T Consensus 150 ~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~ 228 (254)
T PRK14273 150 SLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEE-LIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIE 228 (254)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999887765 55555567999999999999865 9999999999999
Q ss_pred Ecccchhhhh
Q 000504 799 QSGKYEDLIA 808 (1458)
Q Consensus 799 ~~g~~~~l~~ 808 (1458)
+.|+.+++..
T Consensus 229 ~~g~~~~~~~ 238 (254)
T PRK14273 229 EESSTDELFF 238 (254)
T ss_pred EeCCHHHHHh
Confidence 9999988865
No 414
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.6e-34 Score=320.79 Aligned_cols=188 Identities=24% Similarity=0.399 Sum_probs=153.5
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+.. ..+.+++ |+++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 2 l~~~~l~~~~~~~------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 74 (216)
T TIGR00960 2 IRFEQVSKAYPGG------HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKI-RFNGQDLTRLRGRE 74 (216)
T ss_pred eEEEEEEEEecCC------CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEehhhcChhH
Confidence 6789999999642 2368999 99999999999999999999999999999999999986 6665
Q ss_pred ------EEEEEcCCCCCCC-CcHHHHHhcCCC---CC----HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 ------KKAYVPQSSWIQT-GTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~enI~fg~~---~~----~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
.++|++|++.++. .|++||+.++.. .. +++.+++++.+++.+. ......+|||||
T Consensus 75 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~ 143 (216)
T TIGR00960 75 IPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGK-----------AHALPMQLSGGE 143 (216)
T ss_pred HHHHHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHH
Confidence 3699999998765 699999987632 11 1233444444444322 234556899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeE
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i 797 (1458)
|||++||||++.+|+++||||||++||+.+.+.+.+ .+..+ .+++|+|+|||+++++.. ||+|++|++|+|
T Consensus 144 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 144 QQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMR-LFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999888776 45444 347999999999999875 999999999975
No 415
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-34 Score=331.62 Aligned_cols=204 Identities=24% Similarity=0.422 Sum_probs=164.6
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+... ....+.|++ ||+|++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 2 ~l~~~~l~~~y~~~~---~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i-~~~g~~i~~~~~~ 77 (286)
T PRK13646 2 TIRFDNVSYTYQKGT---PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTV-TVDDITITHKTKD 77 (286)
T ss_pred EEEEEEEEEEECCCC---ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE-EECCEECcccccc
Confidence 378999999996430 012468999 99999999999999999999999999999999999986 6655
Q ss_pred --------EEEEEcCCC--CCCCCcHHHHHhcCCC---CCHHHH----HHHHHHhhhhhhHHhhcCCCcccccCCCCCCC
Q 000504 660 --------KKAYVPQSS--WIQTGTIRENILFGKD---MRQSFY----EEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1458)
Q Consensus 660 --------~~ayv~Q~~--~i~~~Ti~enI~fg~~---~~~~~y----~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LS 722 (1458)
.++||+|+| .++..|++|||.|+.. ++.+.. ++.++.++|..+ ..+..+.+||
T Consensus 78 ~~~~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LS 147 (286)
T PRK13646 78 KYIRPVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRD----------VMSQSPFQMS 147 (286)
T ss_pred chHHHHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCC
Confidence 369999997 5677899999998742 232222 223333333211 2345678999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhc-cCCEEEEEeCCeEEE
Q 000504 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQ 799 (1458)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~ 799 (1458)
||||||++||||++.+|+++||||||++||+.+...+.+ .++.+. .++|+|+|||+++++. .||+|++|++|++++
T Consensus 148 gGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~ 226 (286)
T PRK13646 148 GGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMR-LLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVS 226 (286)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999887765 455443 4799999999999986 599999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+++++.+
T Consensus 227 ~g~~~~~~~ 235 (286)
T PRK13646 227 QTSPKELFK 235 (286)
T ss_pred ECCHHHHHh
Confidence 999988765
No 416
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=7.4e-34 Score=319.37 Aligned_cols=203 Identities=30% Similarity=0.443 Sum_probs=169.3
Q ss_pred CccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC-------
Q 000504 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------- 659 (1458)
Q Consensus 588 ~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------- 659 (1458)
...++++|++++|+.. ...+.+++ |+++++|++++|+||||||||||+++|+|+.+|++|++ .++|
T Consensus 9 ~~~l~~~~l~~~~~~~-----~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~ 82 (226)
T cd03248 9 KGIVKFQNVTFAYPTR-----PDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQV-LLDGKPISQYE 82 (226)
T ss_pred CceEEEEEEEEEeCCC-----CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEE-EECCCchHHcC
Confidence 3468999999999753 22468999 99999999999999999999999999999999999986 6665
Q ss_pred ------EEEEEcCCCCCCCCcHHHHHhcCCCCC-HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHH
Q 000504 660 ------KKAYVPQSSWIQTGTIRENILFGKDMR-QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLA 732 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~~Ti~enI~fg~~~~-~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 732 (1458)
.++|++|++.++..|++||+.++.... ...+.+..+...+.+-++.++.|..+..+++..+|||||||||+||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~la 162 (226)
T cd03248 83 HKYLHSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIA 162 (226)
T ss_pred HHHHHhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHH
Confidence 379999999988899999999875422 2222223333445556777776766778888999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeE
Q 000504 733 RAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKI 797 (1458)
Q Consensus 733 RAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i 797 (1458)
||++++|+++||||||++||+++...+.+ .+..+.+++|+|++||+++++..||+|++|++|++
T Consensus 163 ral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 163 RALIRNPQVLILDEATSALDAESEQQVQQ-ALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999877765 55555567899999999999877999999999974
No 417
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-34 Score=320.16 Aligned_cols=195 Identities=24% Similarity=0.358 Sum_probs=158.6
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+. .+.+++ |+++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 1 i~~~~~~~~~~~--------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~~~~~ 71 (220)
T cd03265 1 IEVENLVKKYGD--------FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRA-TVAGHDVVREPREV 71 (220)
T ss_pred CEEEEEEEEECC--------EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEecCcChHHH
Confidence 468899999853 358899 99999999999999999999999999999999999986 6665
Q ss_pred --EEEEEcCCCCCCC-CcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 660 --KKAYVPQSSWIQT-GTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 660 --~~ayv~Q~~~i~~-~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
.++|++|++.++. .|++||+.++.. .+. ++.++.++.+++... ......+||||||||+
T Consensus 72 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~ 140 (220)
T cd03265 72 RRRIGIVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEA-----------ADRLVKTYSGGMRRRL 140 (220)
T ss_pred hhcEEEecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCChhhCCHHHHHHH
Confidence 3799999987765 599999987532 111 223344444444321 2345678999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchhh
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDL 806 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 806 (1458)
+||||++.+|+++||||||++||+++...+.+ .+..+. + ++|+|++||+++++.. ||+|++|++|++++.|+.+++
T Consensus 141 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 141 EIARSLVHRPEVLFLDEPTIGLDPQTRAHVWE-YIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHHHHhcCCCEEEEcCCccCCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999999999887765 444443 3 7899999999999875 999999999999988876653
No 418
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-34 Score=319.81 Aligned_cols=196 Identities=32% Similarity=0.440 Sum_probs=158.3
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------EE
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------KK 661 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------~~ 661 (1458)
++++|.+++|+... ...+.+++ ||++++|++++|+||||||||||+++|+|..+|++|++ .++| .+
T Consensus 1 l~~~~l~~~~~~~~----~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGG----GAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEV-LVDGEPVTGPGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCC----cceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEECccccCcE
Confidence 46889999996420 11468999 99999999999999999999999999999999999987 6766 47
Q ss_pred EEEcCCCCCCC-CcHHHHHhcCCCC---C----HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHH
Q 000504 662 AYVPQSSWIQT-GTIRENILFGKDM---R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLAR 733 (1458)
Q Consensus 662 ayv~Q~~~i~~-~Ti~enI~fg~~~---~----~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 733 (1458)
+|++|++.++. .|++||+.++... . .++.++.++..++.+. ......+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGF-----------ENAYPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCCcccCCHHHHHHHHHHH
Confidence 99999998776 7999999876321 1 1223334444444322 23456789999999999999
Q ss_pred HHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-h-CCcEEEEEecccchhcc-CCEEEEEe--CCeEEEcccc
Q 000504 734 AVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-L-SQKTVLYTTHQLEFLDA-ADLVLVMK--DGKIEQSGKY 803 (1458)
Q Consensus 734 Al~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~D~i~~l~--~G~i~~~g~~ 803 (1458)
|++.+|+++||||||++||+.+...+++ ++..+ . .++|+|++||+++++.. ||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~-~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQE-ELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHH-HHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999888876 44444 3 37999999999998764 99999999 7999987764
No 419
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=6.2e-34 Score=356.69 Aligned_cols=211 Identities=23% Similarity=0.374 Sum_probs=177.4
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEEcCeeCCCCCHHH-Hhcc
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEP--SGGRILIDGVDISMIGLQD-LRSR 1284 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p--~~G~I~IDG~dI~~i~l~~-LR~~ 1284 (1458)
|+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999964 3599999999999999999999999999999999999987 7999999999998877654 4678
Q ss_pred eEEEccCCCCccc-cHHHhcCcCCC-------CC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1285 LSIIPQDPMLFQG-TVRTNLDPLEQ-------HS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1285 i~iIpQdp~LF~g-TIR~NLdp~~~-------~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
++|+||+|.+|.. |+++|+..... .. ++++.++++..++.+.. .+.++ ..||||||||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~----~~LSgG~~qr 149 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN------VTRPV----GDYGGGQQQL 149 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc------ccCch----hhCCHHHHHH
Confidence 9999999988876 99999863211 11 12355566666553211 12333 4699999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
++|||||+++|+||+|||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 150 v~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (500)
T TIGR02633 150 VEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS 229 (500)
T ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC
Confidence 999999999999999999999999999999999998753 46899999999999876 9999999999999999887653
No 420
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.1e-34 Score=316.51 Aligned_cols=186 Identities=32% Similarity=0.473 Sum_probs=153.8
Q ss_pred EeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------EE
Q 000504 593 IEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG----------KK 661 (1458)
Q Consensus 593 i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g----------~~ 661 (1458)
++|++++|+.. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++| .+
T Consensus 2 ~~~l~~~~~~~-------~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~~~i 73 (205)
T cd03226 2 IENISFSYKKG-------TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSI-LLNGKPIKAKERRKSI 73 (205)
T ss_pred cccEEEEeCCc-------CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEE-EECCEEhhhHHhhcce
Confidence 57888888531 357999 99999999999999999999999999999999999987 6766 47
Q ss_pred EEEcCCC--CCCCCcHHHHHhcCCCC---CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHc
Q 000504 662 AYVPQSS--WIQTGTIRENILFGKDM---RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVY 736 (1458)
Q Consensus 662 ayv~Q~~--~i~~~Ti~enI~fg~~~---~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 736 (1458)
+|++|+| .++..|++||+.++.+. ++++.+++++.+++.+. ......+||||||||++||||++
T Consensus 74 ~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~laral~ 142 (205)
T cd03226 74 GYVMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYAL-----------KERHPLSLSGGQKQRLAIAAALL 142 (205)
T ss_pred EEEecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchh-----------cCCCchhCCHHHHHHHHHHHHHH
Confidence 9999997 45678999999986432 22345556666655432 23455689999999999999999
Q ss_pred cCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeEE
Q 000504 737 SNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1458)
Q Consensus 737 ~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~ 798 (1458)
.+|+++||||||++||+.+.+.+.+ .+..+ .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 143 ~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 143 SGKDLLIFDEPTSGLDYKNMERVGE-LIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred hCCCEEEEeCCCccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999777765 55554 457999999999999875 9999999999874
No 421
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-31 Score=294.94 Aligned_cols=502 Identities=16% Similarity=0.158 Sum_probs=324.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-chhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000504 266 PQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDH-SSYH-YGLVLASVFLFAKTVESLTQRQWYFGAN 343 (1458)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~-~~~~-~g~~l~~~l~~~~~~~~l~~~~~~~~~~ 343 (1458)
.-.++|.+++.++....+.+.. ..++-.++-.+-+++-+.... ...- .-..+...++++..+. +.--.+..+
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~---g~~g~~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~is---~lg~t~~gq 77 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLAS---GALGIGLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLIS---QLGLTTLGQ 77 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 3457778888777655544433 334445554444555332220 0010 0111222223333322 222233344
Q ss_pred HHHHHHHHHHHHHHHHHhcccccCCC-CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 000504 344 RIGIRVRSALTVLIYKRSMAIKFAGP-SSGIIINMINVDVERIGDFFLYIHRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1458)
Q Consensus 344 r~g~~iR~~L~~~Iy~K~L~ls~~~~-~~G~ivnlms~D~~ri~~~~~~~~~~w~~plqi~~al~lL~~~lG~~a~l~gl 422 (1458)
....++|.-++..|..--+. .-++ +++.+..-++.|+..|.-.+..+.++-.+.+-+..++..|++.=+ ...+..+
T Consensus 78 ~~I~klr~~~~~kil~tple--rier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp-~mf~l~v 154 (546)
T COG4615 78 HFIYKLRSEFIKKILDTPLE--RIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSP-KMFLLTV 154 (546)
T ss_pred HHHHHHHHHHHHHHhcCHHH--HHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhH-HHHHHHH
Confidence 44556666665555432221 1122 778899999999999997777777776666656666667776555 7777778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHH--HHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000504 423 FSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQ--EFLKKL-LRLREIERDSLKKYLYTCS 499 (1458)
Q Consensus 423 ~~~~i~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE~--~f~~~I-~~~R~~El~~l~k~~~~~a 499 (1458)
+.+++.+..++...++..++..+..+..|+-.+..+.++.|-|-+|+..=.. .+.+.+ ...++.+-.. .+...
T Consensus 155 V~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~~~----~~~n~ 230 (546)
T COG4615 155 VWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRHHI----IRANT 230 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHhhh----hhhhH
Confidence 8888888888888888888888888888999999999999999999876322 122221 1122222111 11111
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 000504 500 AI-AFLFWASPTLVSVITFGVCILLKTPLTS-GAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKK 577 (1458)
Q Consensus 500 ~~-~~~~~~~p~~v~~~tF~~~~~~~~~L~~-~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~ 577 (1458)
+. ....|..-.+.+++....|+...-...+ ..+.|....+-.++.|+.+.-..++.+.+|.++++||.++=..|+..+
T Consensus 231 f~~la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~ 310 (546)
T COG4615 231 FHLLAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKAD 310 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCcccc
Confidence 11 2234444444444433333322222222 234444445556899999999999999999999999999877665333
Q ss_pred CCCCCCCCCCCccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEE
Q 000504 578 PITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIK 656 (1458)
Q Consensus 578 ~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~ 656 (1458)
.....+.+ +-..++++|+.|+|+++ .+.+.. |++|++||+|.|+|.||||||||++.++|+++|++|++ .
T Consensus 311 ~~~~q~~p-~~~~lelrnvrfay~~~-------~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I-~ 381 (546)
T COG4615 311 FPRPQAFP-DWKTLELRNVRFAYQDN-------AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEI-L 381 (546)
T ss_pred CCCCCcCC-cccceeeeeeeeccCcc-------cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCce-e
Confidence 22212221 23569999999999875 366666 99999999999999999999999999999999999996 8
Q ss_pred ECCEE-------------EEEcCCCCCCCCcHHHHHhcCCC-CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCC
Q 000504 657 VHGKK-------------AYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1458)
Q Consensus 657 ~~g~~-------------ayv~Q~~~i~~~Ti~enI~fg~~-~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LS 722 (1458)
++|+- +-|+-+-|+|..+ +-++. ..++..++-++.-.+.+.. .+.+|..+ ...||
T Consensus 382 ldg~pV~~e~ledYR~LfSavFsDyhLF~~l-----l~~e~~as~q~i~~~LqrLel~~kt-sl~d~~fs-----~~kLS 450 (546)
T COG4615 382 LDGKPVSAEQLEDYRKLFSAVFSDYHLFDQL-----LGPEGKASPQLIEKWLQRLELAHKT-SLNDGRFS-----NLKLS 450 (546)
T ss_pred ECCccCCCCCHHHHHHHHHHHhhhHhhhHhh-----hCCccCCChHHHHHHHHHHHHhhhh-cccCCccc-----ccccc
Confidence 88853 2233333443221 11111 2233333333333333222 12233222 24699
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhccCCEEEEEeCCeEEEc
Q 000504 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGKIEQS 800 (1458)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~ 800 (1458)
-|||.|+++--|+..+.|||+|||=-+-=||+-++..++..+-.+. .||||+.||||-.+...|||++.|++|++++.
T Consensus 451 tGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 451 TGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred cchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 9999999999999999999999999999999998888877664443 49999999999999999999999999999864
No 422
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=7.4e-34 Score=322.98 Aligned_cols=197 Identities=27% Similarity=0.381 Sum_probs=159.9
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+.+ .+.+++ ||++++|++++|+||||||||||+++|+|..+|++|++ .++|
T Consensus 2 l~~~~l~~~~~~~-------~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 73 (243)
T TIGR02315 2 LEVENLSKVYPNG-------KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSI-LLEGTDITKLRGKK 73 (243)
T ss_pred eEEEeeeeecCCC-------cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEE-EECCEEhhhCCHHH
Confidence 6789999998622 358999 99999999999999999999999999999999999986 6655
Q ss_pred ------EEEEEcCCCCCCC-CcHHHHHhcCCCC------------C---HHHHHHHHHHhhhhhhHHhhcCCCcccccCC
Q 000504 660 ------KKAYVPQSSWIQT-GTIRENILFGKDM------------R---QSFYEEVLEGCALNQDIEMWADGDLSVVGER 717 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~enI~fg~~~------------~---~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~ 717 (1458)
.++|++|++.++. .|++||+.++... . .++.+++++.+++. ......
T Consensus 74 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~ 142 (243)
T TIGR02315 74 LRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLA-----------DKAYQR 142 (243)
T ss_pred HHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcH-----------hhhcCC
Confidence 2699999988765 6999999876321 0 11222333333332 123456
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhc-cCCEEEEEeC
Q 000504 718 GINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKD 794 (1458)
Q Consensus 718 g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~D~i~~l~~ 794 (1458)
..+||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+. .++|+|++||+++++. .||+|++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMD-YLKRINKEDGITVIINLHQVDLAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEEC
Confidence 78999999999999999999999999999999999998777765 455443 3789999999999986 4999999999
Q ss_pred CeEEEcccchhhh
Q 000504 795 GKIEQSGKYEDLI 807 (1458)
Q Consensus 795 G~i~~~g~~~~l~ 807 (1458)
|++++.|+++++.
T Consensus 222 G~i~~~~~~~~~~ 234 (243)
T TIGR02315 222 GEIVFDGAPSELD 234 (243)
T ss_pred CEEEecCCHHHhC
Confidence 9999999988763
No 423
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.2e-34 Score=318.13 Aligned_cols=197 Identities=25% Similarity=0.438 Sum_probs=161.7
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE---------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--------- 660 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--------- 660 (1458)
++++|+++.|+.. ..+.+++ |+++++|++++|+||||||||||+++|+|.++|++|++ .++|.
T Consensus 1 l~~~~l~~~~~~~------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 73 (220)
T cd03263 1 LQIRNLTKTYKKG------TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTA-YINGYSIRTDRKAA 73 (220)
T ss_pred CEEEeeEEEeCCC------CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEecccchHHH
Confidence 4688999998642 2468999 99999999999999999999999999999999999987 66653
Q ss_pred ---EEEEcCCCCCC-CCcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 661 ---KAYVPQSSWIQ-TGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 661 ---~ayv~Q~~~i~-~~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
++|++|++.++ ..|++||+.++.. ... ++.+++++.+++.+. .+....+||||||||+
T Consensus 74 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 142 (220)
T cd03263 74 RQSLGYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDK-----------ANKRARTLSGGMKRKL 142 (220)
T ss_pred hhhEEEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhChhhhCCHHHHHHH
Confidence 69999998876 6799999987532 111 233444555544322 2345678999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchhh
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDL 806 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 806 (1458)
+||||++.+|+++||||||++||+.+.+.+.+ .+..+.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 143 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 143 SLAIALIGGPSVLLLDEPTSGLDPASRRAIWD-LILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHHHHHhcCCCEEEECCCCCCCCHHHHHHHHH-HHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999887765 55555567999999999999875 999999999999999887664
No 424
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-34 Score=322.55 Aligned_cols=197 Identities=27% Similarity=0.388 Sum_probs=159.2
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+.+ .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~~-------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 72 (241)
T cd03256 1 IEVENLSKTYPNG-------KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSV-LIDGTDINKLKGKA 72 (241)
T ss_pred CEEeeEEEecCCc-------cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceE-EECCEeccccCHhH
Confidence 4678999998641 358999 99999999999999999999999999999999999986 6654
Q ss_pred ------EEEEEcCCCCCCC-CcHHHHHhcCCCC------------CHH---HHHHHHHHhhhhhhHHhhcCCCcccccCC
Q 000504 660 ------KKAYVPQSSWIQT-GTIRENILFGKDM------------RQS---FYEEVLEGCALNQDIEMWADGDLSVVGER 717 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~enI~fg~~~------------~~~---~y~~vl~~c~l~~dl~~l~~gd~t~ig~~ 717 (1458)
.++|++|++.++. .|++||+.++... .+. +.++.++..++. ...+..
T Consensus 73 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~ 141 (241)
T cd03256 73 LRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLL-----------DKAYQR 141 (241)
T ss_pred HHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCCh-----------hhhCCC
Confidence 3799999987765 7999999875321 111 112222222221 234567
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhc-cCCEEEEEeC
Q 000504 718 GINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKD 794 (1458)
Q Consensus 718 g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~D~i~~l~~ 794 (1458)
+.+||||||||++||||++.+|+++||||||++||+.+...+.+ .+..+. .++|+|++||+++.+. .||+|++|++
T Consensus 142 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~ 220 (241)
T cd03256 142 ADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMD-LLKRINREEGITVIVSLHQVDLAREYADRIVGLKD 220 (241)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 78999999999999999999999999999999999999887766 454443 3799999999999987 5999999999
Q ss_pred CeEEEcccchhhh
Q 000504 795 GKIEQSGKYEDLI 807 (1458)
Q Consensus 795 G~i~~~g~~~~l~ 807 (1458)
|++++.|+++++.
T Consensus 221 G~i~~~~~~~~~~ 233 (241)
T cd03256 221 GRIVFDGPPAELT 233 (241)
T ss_pred CEEEeecCHHHhh
Confidence 9999999988763
No 425
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-34 Score=338.74 Aligned_cols=204 Identities=25% Similarity=0.346 Sum_probs=166.7
Q ss_pred CccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE------
Q 000504 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK------ 660 (1458)
Q Consensus 588 ~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~------ 660 (1458)
...++++|++++|+. .+.+++ ||++++||+++|+|||||||||||++|+|+.+|++|++ .++|.
T Consensus 17 ~~~l~l~~v~~~~~~--------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I-~i~g~~i~~~~ 87 (377)
T PRK11607 17 TPLLEIRNLTKSFDG--------QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQI-MLDGVDLSHVP 87 (377)
T ss_pred CceEEEEeEEEEECC--------EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEE-EECCEECCCCC
Confidence 346999999999953 357899 99999999999999999999999999999999999987 77763
Q ss_pred -----EEEEcCCCCCCC-CcHHHHHhcCCCC---CHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHH
Q 000504 661 -----KAYVPQSSWIQT-GTIRENILFGKDM---RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1458)
Q Consensus 661 -----~ayv~Q~~~i~~-~Ti~enI~fg~~~---~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 727 (1458)
++||+|++-++. .||+|||.|+... ... +.+++++..++.+ ....+..+|||||||
T Consensus 88 ~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~-----------~~~~~~~~LSgGq~Q 156 (377)
T PRK11607 88 PYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQE-----------FAKRKPHQLSGGQRQ 156 (377)
T ss_pred HHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHHHHH
Confidence 699999998875 5999999997432 222 2233333333322 234566799999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhc-cCCEEEEEeCCeEEEcccchh
Q 000504 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSGKYED 805 (1458)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~ 805 (1458)
||+|||||+.+|+++|||||||+||+.....+.+.+.+-.. .+.|+|+||||.+++. .||+|++|++|++.+.|++++
T Consensus 157 RVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~ 236 (377)
T PRK11607 157 RVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEE 236 (377)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHH
Confidence 99999999999999999999999999998877654433222 3799999999999865 599999999999999999999
Q ss_pred hhhhcc
Q 000504 806 LIADQN 811 (1458)
Q Consensus 806 l~~~~~ 811 (1458)
+.....
T Consensus 237 ~~~~p~ 242 (377)
T PRK11607 237 IYEHPT 242 (377)
T ss_pred HHhCCc
Confidence 876433
No 426
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=9.2e-34 Score=314.44 Aligned_cols=190 Identities=26% Similarity=0.365 Sum_probs=157.9
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|..+|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 71 (208)
T cd03268 1 LKTNDLTKTYGK--------KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEI-TFDGKSYQKNIEAL 71 (208)
T ss_pred CEEEEEEEEECC--------eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEE-EECCCcccchHHHH
Confidence 468899999853 368999 99999999999999999999999999999999999987 6765
Q ss_pred -EEEEEcCCCCCC-CCcHHHHHhcCCC---CCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHH
Q 000504 660 -KKAYVPQSSWIQ-TGTIRENILFGKD---MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARA 734 (1458)
Q Consensus 660 -~~ayv~Q~~~i~-~~Ti~enI~fg~~---~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 734 (1458)
.++|++|++.++ +.|++||+.++.. .++++.+++++..++.+. ......+|||||||||+||||
T Consensus 72 ~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la~a 140 (208)
T cd03268 72 RRIGALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDS-----------AKKKVKGFSLGMKQRLGIALA 140 (208)
T ss_pred hhEEEecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHH-----------HhhhHhhCCHHHHHHHHHHHH
Confidence 379999998876 5799999987532 233444555555555432 234567899999999999999
Q ss_pred HccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 735 VYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 735 l~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
++.+|+++||||||++||+.+.+.+.+ .+.... .++|+|++||+++++.. ||++++|++|++++.|
T Consensus 141 l~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 141 LLGNPDLLILDEPTNGLDPDGIKELRE-LILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred HhcCCCEEEECCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999887765 454443 58999999999999875 9999999999998764
No 427
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=9e-34 Score=363.18 Aligned_cols=213 Identities=24% Similarity=0.363 Sum_probs=185.6
Q ss_pred cEEEEeeeEEeCCC--CCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHH---
Q 000504 1207 KIELENLLVQYNPT--LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL--- 1281 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L--- 1281 (1458)
.++++|++++|+.+ .+++|+|+||+|++||+++|+|++|||||||+++|.|+++|++|+|.+||.++...+.+++
T Consensus 4 ~l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 83 (648)
T PRK10535 4 LLELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQL 83 (648)
T ss_pred EEEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHH
Confidence 48999999999642 2469999999999999999999999999999999999999999999999999999887654
Q ss_pred -hcceEEEccCCCCccc-cHHHhcCcC----CCC---CHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHH
Q 000504 1282 -RSRLSIIPQDPMLFQG-TVRTNLDPL----EQH---SDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQL 1352 (1458)
Q Consensus 1282 -R~~i~iIpQdp~LF~g-TIR~NLdp~----~~~---sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1352 (1458)
|+.++|+||+|.+|++ |+.+|++.. +.. .++++.+.++.+++.+..... ..+||+||+||
T Consensus 84 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~lgl~~~~~~~-----------~~~LS~Gq~qr 152 (648)
T PRK10535 84 RREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRVEYQ-----------PSQLSGGQQQR 152 (648)
T ss_pred HhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhcCC-----------cccCCHHHHHH
Confidence 6789999999999975 999999631 111 123456677777776554332 34799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHh
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLL 1430 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~~DrVlvL~~G~ivE~g~p~~Ll 1430 (1458)
++|||||+++|++|+|||||++||.++.+.+.+.|++.. +++|+|+|+|+++.+..||++++|++|++++.|++++..
T Consensus 153 v~LAraL~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (648)
T PRK10535 153 VSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAQEKV 231 (648)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHHHHHhCCEEEEEECCEEEeecCccccc
Confidence 999999999999999999999999999999999998764 478999999999999889999999999999999999876
No 428
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=5.7e-34 Score=318.51 Aligned_cols=190 Identities=31% Similarity=0.432 Sum_probs=153.2
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+... ...+.+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~~~----~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i-~~~g~~~~~~~~~~ 75 (218)
T cd03255 1 IELKNLSKTYGGGG----EKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEV-RVDGTDISKLSEKE 75 (218)
T ss_pred CeEeeeEEEecCCC----cceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeE-EECCEehhhcchhH
Confidence 46889999996420 11468999 99999999999999999999999999999999999986 5543
Q ss_pred -------EEEEEcCCCCCCCC-cHHHHHhcCCCCC-------HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChH
Q 000504 660 -------KKAYVPQSSWIQTG-TIRENILFGKDMR-------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1458)
Q Consensus 660 -------~~ayv~Q~~~i~~~-Ti~enI~fg~~~~-------~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGG 724 (1458)
.++|++|++.++.. |++||+.++..+. +++.+++++..++.+ .......+||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G 144 (218)
T cd03255 76 LAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGD-----------RLNHYPSELSGG 144 (218)
T ss_pred HHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCch-----------hhhcChhhcCHH
Confidence 47999999988765 9999999864321 122333344443322 234566799999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhccCCEEEEEeCCeE
Q 000504 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDAADLVLVMKDGKI 797 (1458)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~D~i~~l~~G~i 797 (1458)
||||++||||++.+|+++||||||++||+.+...+.+ ++..+. .++|+|++||+++++..||+|++|++|++
T Consensus 145 ~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 145 QQQRVAIARALANDPKIILADEPTGNLDSETGKEVME-LLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 9999999999999999999999999999999777765 555544 37999999999998878999999999974
No 429
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=2.7e-30 Score=313.34 Aligned_cols=434 Identities=19% Similarity=0.230 Sum_probs=300.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccCCC--CHHH------HHHHHHhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000504 339 YFGANRIGIRVRSALTVLIYKRSMAIKFAGP--SSGI------IINMINVDVERIGDFFLYIHR-IWLLPVQVFLALVIL 409 (1458)
Q Consensus 339 ~~~~~r~g~~iR~~L~~~Iy~K~L~ls~~~~--~~G~------ivnlms~D~~ri~~~~~~~~~-~w~~plqi~~al~lL 409 (1458)
.|..+++.++.|.-|+..+.+|=|.-...-+ ..|+ .=..++.|+..+.+....+-. +.-..++++.=..+|
T Consensus 107 ~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iL 186 (604)
T COG4178 107 TWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGIL 186 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567789999999999999999876543322 2222 224677777776665544333 333334444444567
Q ss_pred HHHhhhHH---------HHHHHH--HHHHHHHHHHHHH----HHHHHHHH-HHHHHHHHHHHHHHHHHhhhHHHHHhccH
Q 000504 410 YKNLGAAP---------AFAALF--STIFVMVSNTPLA----NRQERFHS-MIMEAKDARIKATSETLKSMRVLKLLSWE 473 (1458)
Q Consensus 410 ~~~lG~~a---------~l~gl~--~~~i~~~~~~~~~----~~~~~~q~-~~m~~~D~Rv~~~sE~L~~ik~IKl~~wE 473 (1458)
|..-| .. .++|.. ++++.+++...++ |..-+.-. +....-|-|-.+ ..+.++-..|-+|+-|
T Consensus 187 w~lsg-~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~L-vrv~enaE~IAly~GE 264 (604)
T COG4178 187 WSLSG-GLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSL-VRVRENAEAIALYRGE 264 (604)
T ss_pred HHccC-cceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHH-HHHHhhHHHHHHhcCc
Confidence 75444 22 122221 1222233333333 32222111 111223445433 3567788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHH---HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 000504 474 QEFLKKLLRLREIERDSLKKYL----YTCSAIAFLFWAS---PTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPI 546 (1458)
Q Consensus 474 ~~f~~~I~~~R~~El~~l~k~~----~~~a~~~~~~~~~---p~~v~~~tF~~~~~~~~~L~~~~vft~lalf~~l~~pl 546 (1458)
+.-++++.+.=..=++..++.. .+..+.....+++ |.++.+ =.++.+.++-+.+.++-..|+.+...+
T Consensus 265 ~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~a-----p~~f~g~i~~G~lmqa~~aF~~v~ssl 339 (604)
T COG4178 265 KVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAA-----PRYFSGQITFGGLMQAVGAFGQVHSSL 339 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhcc-----HhhhcCcChHHHHHHHHHHHHHHHHHH
Confidence 8777766554222222222111 1111111112222 222211 124577899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccC--CCCC-CCCCCC------CCCCccEEEeeeEEEeCCcccccCCCcccccC-
Q 000504 547 YNLPELISMIAQTKVSLYRIQEFIKEDN--QKKP-ITEPTS------KASDVAIDIEAGEYAWDAREENFKKPTIKLTD- 616 (1458)
Q Consensus 547 ~~lp~~i~~~~~a~vS~~RI~~fL~~~e--~~~~-~~~~~~------~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~- 616 (1458)
..+-+.+..+.+-++++.|+.+|-..-| +.+. ....+. +..+..|.++|.+..-++. .+.+++
T Consensus 340 swfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~-------~~ll~~l 412 (604)
T COG4178 340 SWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG-------QTLLSEL 412 (604)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC-------Ceeeccc
Confidence 9999999999999999999999985433 1111 000000 1114679999999987654 477888
Q ss_pred cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEEC-C-EEEEEcCCCCCCCCcHHHHHhcCCC---CCHHHHH
Q 000504 617 KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVH-G-KKAYVPQSSWIQTGTIRENILFGKD---MRQSFYE 691 (1458)
Q Consensus 617 ~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~-g-~~ayv~Q~~~i~~~Ti~enI~fg~~---~~~~~y~ 691 (1458)
|+.+++|+.+.|.|++|||||||+++|+|..|--+|++ ..+ + .+-|+||.|.++.||.||-|++... ++++.+.
T Consensus 413 ~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I-~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~ 491 (604)
T COG4178 413 NFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRI-SMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELV 491 (604)
T ss_pred eeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCce-ecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHH
Confidence 99999999999999999999999999999999999986 444 3 3799999999999999999999753 6678899
Q ss_pred HHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCc
Q 000504 692 EVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQK 771 (1458)
Q Consensus 692 ~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~ 771 (1458)
+++..|+|.+-.+.+.+-+. =...||||||||++.||.++++|++++|||.|||||+.+...+++ .+++.+.+.
T Consensus 492 ~vL~~vgL~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q-~l~~~lp~~ 565 (604)
T COG4178 492 AVLHKVGLGDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQ-LLKEELPDA 565 (604)
T ss_pred HHHHHcCcHHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHH-HHHhhCCCC
Confidence 99999999988887654332 345799999999999999999999999999999999999888876 567777899
Q ss_pred EEEEEecccchhccCCEEEEEe
Q 000504 772 TVLYTTHQLEFLDAADLVLVMK 793 (1458)
Q Consensus 772 tvilvtH~~~~l~~~D~i~~l~ 793 (1458)
|+|-|.|+.......++.+.+.
T Consensus 566 tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 566 TVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred EEEEeccchhhHHHHhhheeec
Confidence 9999999988777666666554
No 430
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=335.94 Aligned_cols=202 Identities=25% Similarity=0.361 Sum_probs=164.3
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+... ...+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 2 i~i~~l~~~y~~~~----~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I-~~~g~~i~~~~~~~ 76 (343)
T PRK11153 2 IELKNISKVFPQGG----RTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRV-LVDGQDLTALSEKE 76 (343)
T ss_pred EEEEeEEEEeCCCC----CceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEE-EECCEECCcCCHHH
Confidence 68899999997320 12468999 99999999999999999999999999999999999986 6655
Q ss_pred ------EEEEEcCCCCCCC-CcHHHHHhcCCC---CCHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 ------KKAYVPQSSWIQT-GTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~enI~fg~~---~~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
.++|++|++.++. .|++||+.++.. .... +.++.++..++. ........+|||||
T Consensus 77 ~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~-----------~~~~~~~~~LSgGq 145 (343)
T PRK11153 77 LRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLS-----------DKADRYPAQLSGGQ 145 (343)
T ss_pred HHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-----------hhhhCChhhCCHHH
Confidence 3799999998765 799999998642 2222 222233333332 12345667999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEccc
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~ 802 (1458)
|||++||||++.+|+++||||||++||+.+...+.+ .+..+. .++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 146 ~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~-~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~ 224 (343)
T PRK11153 146 KQRVAIARALASNPKVLLCDEATSALDPATTRSILE-LLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGT 224 (343)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcC
Confidence 999999999999999999999999999999887766 454443 37999999999999875 99999999999999999
Q ss_pred chhhhhh
Q 000504 803 YEDLIAD 809 (1458)
Q Consensus 803 ~~~l~~~ 809 (1458)
.+++...
T Consensus 225 ~~~~~~~ 231 (343)
T PRK11153 225 VSEVFSH 231 (343)
T ss_pred HHHHHhC
Confidence 9988753
No 431
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=8.6e-34 Score=315.86 Aligned_cols=187 Identities=33% Similarity=0.502 Sum_probs=151.5
Q ss_pred EeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE--------EEE
Q 000504 593 IEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--------KAY 663 (1458)
Q Consensus 593 i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--------~ay 663 (1458)
++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|. ++|
T Consensus 2 ~~~l~~~~~~--------~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i-~~~g~~~~~~~~~i~~ 72 (213)
T cd03235 2 VEDLTVSYGG--------HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSI-RVFGKPLEKERKRIGY 72 (213)
T ss_pred cccceeEECC--------EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEE-EECCccHHHHHhheEE
Confidence 5678888853 357899 99999999999999999999999999999999999997 77773 899
Q ss_pred EcCCCCC---CCCcHHHHHhcCCCC--------C---HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 664 VPQSSWI---QTGTIRENILFGKDM--------R---QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 664 v~Q~~~i---~~~Ti~enI~fg~~~--------~---~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
++|++.+ ++.|++||+.++... . +++.+++++.+++.+.. .....+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELA-----------DRQIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHH-----------hCCcccCCHHHHHHH
Confidence 9999875 457999999886431 1 12334445555543222 245678999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
+||||+..+|+++||||||++||+.+...+.+ .+..+. +++|+|++||+++++.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYE-LLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999887766 454443 67999999999999865 9999999886 54443
No 432
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1e-33 Score=331.01 Aligned_cols=199 Identities=28% Similarity=0.423 Sum_probs=163.8
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1458)
..++++|++++|+. ...+++ ||+|++||+++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 6 ~~i~i~~l~k~~~~--------~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v-~i~G~~~~~~~~ 76 (306)
T PRK13537 6 APIDFRNVEKRYGD--------KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSI-SLCGEPVPSRAR 76 (306)
T ss_pred ceEEEEeEEEEECC--------eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEE-EECCEecccchH
Confidence 46899999999963 358999 99999999999999999999999999999999999987 7765
Q ss_pred ----EEEEEcCCCCCC-CCcHHHHHhcCCCC---CHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHH
Q 000504 660 ----KKAYVPQSSWIQ-TGTIRENILFGKDM---RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1458)
Q Consensus 660 ----~~ayv~Q~~~i~-~~Ti~enI~fg~~~---~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 727 (1458)
.+|||||++.++ +.|++||+.|.... +.. +.+++++.+++.. ....+..+|||||||
T Consensus 77 ~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~q 145 (306)
T PRK13537 77 HARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLEN-----------KADAKVGELSGGMKR 145 (306)
T ss_pred HHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------HhcCchhhCCHHHHH
Confidence 379999998876 47999999863221 111 2223333333321 123455689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchh
Q 000504 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYED 805 (1458)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~ 805 (1458)
|++||||+.++|++++|||||++||+.+.+.+++ .+..+. +|+|+|++||+++++.. ||+|++|++|++++.|++++
T Consensus 146 rl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~-~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~ 224 (306)
T PRK13537 146 RLTLARALVNDPDVLVLDEPTTGLDPQARHLMWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHA 224 (306)
T ss_pred HHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999888776 455543 48999999999999976 99999999999999999988
Q ss_pred hhh
Q 000504 806 LIA 808 (1458)
Q Consensus 806 l~~ 808 (1458)
+.+
T Consensus 225 l~~ 227 (306)
T PRK13537 225 LIE 227 (306)
T ss_pred HHh
Confidence 865
No 433
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=4.9e-34 Score=319.73 Aligned_cols=186 Identities=24% Similarity=0.440 Sum_probs=159.5
Q ss_pred EEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEEEccCCCC---ccccHHHhcCcC
Q 000504 1230 CTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPML---FQGTVRTNLDPL 1306 (1458)
Q Consensus 1230 ~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~L---F~gTIR~NLdp~ 1306 (1458)
|+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. +.|++++|+||+|.+ |+.|+++|+...
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~-----~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~ 75 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPPAKGTVKVAGASPG-----KGWRHIGYVPQRHEFAWDFPISVAHTVMSG 75 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCccch-----HhhCcEEEecccccccCCCCccHHHHHHhc
Confidence 578999999999999999999999999999999999999998763 357889999999976 457999998532
Q ss_pred --------CC---CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCC
Q 000504 1307 --------EQ---HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASI 1375 (1458)
Q Consensus 1307 --------~~---~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTssl 1375 (1458)
.. ..++++.++++.+++.+.. ++.+ ..||+|||||++||||++++|++|+|||||++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrv~laral~~~p~llilDEP~~~L 144 (223)
T TIGR03771 76 RTGHIGWLRRPCVADFAAVRDALRRVGLTELA-------DRPV----GELSGGQRQRVLVARALATRPSVLLLDEPFTGL 144 (223)
T ss_pred cccccccccCCcHHHHHHHHHHHHHhCCchhh-------cCCh----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 11 1234577888888886543 3333 359999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1376 DTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1376 D~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
|+.+...+.+.|++.. ++.|+|+++|+++.+.. ||+|+++ +|++++.|+++++.++
T Consensus 145 D~~~~~~l~~~l~~~~~~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~~~~ 202 (223)
T TIGR03771 145 DMPTQELLTELFIELAGAGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQLQDP 202 (223)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHhcCh
Confidence 9999999999998764 47899999999998865 9999999 7999999999998753
No 434
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=326.43 Aligned_cols=201 Identities=27% Similarity=0.403 Sum_probs=167.0
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1458)
..++++|++++|+.. ..+.+++ ||+|++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 4 ~~l~~~~l~~~~~~~------~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i-~~~g~~i~~~~~ 76 (279)
T PRK13635 4 EIIRVEHISFRYPDA------ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTI-TVGGMVLSEETV 76 (279)
T ss_pred ceEEEEEEEEEeCCC------CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEE-EECCEECCcCcH
Confidence 358999999999642 2468999 99999999999999999999999999999999999987 6766
Q ss_pred -----EEEEEcCCC--CCCCCcHHHHHhcCCCC---CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 -----KKAYVPQSS--WIQTGTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 -----~~ayv~Q~~--~i~~~Ti~enI~fg~~~---~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
.++|++|+| .+++.|++|||.++... .+ ++.+++++.++|...+ .....+|||||
T Consensus 77 ~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~ 145 (279)
T PRK13635 77 WDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFL-----------NREPHRLSGGQ 145 (279)
T ss_pred HHHhhheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhh-----------hCCcccCCHHH
Confidence 369999998 45678999999986321 21 2234445555554332 34556899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhccCCEEEEEeCCeEEEcccc
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKY 803 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~ 803 (1458)
|||++||||++.+|+++||||||++||+.+...+++ ++..+. + ++|+|++||+++.+..||+|++|++|++++.|+.
T Consensus 146 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (279)
T PRK13635 146 KQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLE-TVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTP 224 (279)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999888776 455544 3 7899999999999888999999999999999998
Q ss_pred hhhhh
Q 000504 804 EDLIA 808 (1458)
Q Consensus 804 ~~l~~ 808 (1458)
+++..
T Consensus 225 ~~~~~ 229 (279)
T PRK13635 225 EEIFK 229 (279)
T ss_pred HHHhc
Confidence 88765
No 435
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=4.5e-34 Score=312.28 Aligned_cols=173 Identities=27% Similarity=0.435 Sum_probs=147.7
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC--CCHHHHhcceEEEccCC--CCccc
Q 000504 1222 PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISM--IGLQDLRSRLSIIPQDP--MLFQG 1297 (1458)
Q Consensus 1222 ~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~--i~l~~LR~~i~iIpQdp--~LF~g 1297 (1458)
..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .....+|++++|+||+| .+|..
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 84 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLFAA 84 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhccccc
Confidence 459999999999999999999999999999999999999999999999999852 23456788999999998 57888
Q ss_pred cHHHhcCcC---CCCC----HHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeC
Q 000504 1298 TVRTNLDPL---EQHS----DQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDE 1370 (1458)
Q Consensus 1298 TIR~NLdp~---~~~s----deeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDE 1370 (1458)
|+++|+... ...+ ++++.++++..++.+..... + ..||+|||||++|||||+++|++|+|||
T Consensus 85 tv~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 85 DVDQDVAFGPLNLGLSEAEVERRVREALTAVGASGLRERP-------T----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCchhhhhCC-------h----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 999999632 1122 23567788888886654332 2 4699999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhh
Q 000504 1371 ATASIDTATDNVIQQTIREET-SRCTVITVAHRIPT 1405 (1458)
Q Consensus 1371 aTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~t 1405 (1458)
||++||+.+.+.+.+.|++.. +++|||+|+|+++.
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeecccc
Confidence 999999999999999998764 47899999999865
No 436
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-34 Score=289.30 Aligned_cols=217 Identities=29% Similarity=0.440 Sum_probs=187.9
Q ss_pred cEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC----------
Q 000504 1207 KIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMI---------- 1276 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i---------- 1276 (1458)
.++++|+..+|.+. .||||||++.++|+.|.|+|.|||||||++.++-=+-.|+.|+|.++|..|..-
T Consensus 6 ~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 6 ALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 58899999999764 499999999999999999999999999999999999999999999999877532
Q ss_pred ---CHHHHhcceEEEccCCCCccc-cHHHhcC--cC---CCCCHHHH---HHHHHHcCcHHHHHhcccccCccccCCCCC
Q 000504 1277 ---GLQDLRSRLSIIPQDPMLFQG-TVRTNLD--PL---EQHSDQEI---WEVINKCHLAEIVRQDQRLLDAPVAEDGEN 1344 (1458)
Q Consensus 1277 ---~l~~LR~~i~iIpQdp~LF~g-TIR~NLd--p~---~~~sdeeI---~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1344 (1458)
.++.+|+++++|.|.-.|++. |+-+|.- |. +.-.++.+ ...|.++|+.+-...-| ..
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----------~~ 152 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYP-----------AH 152 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCc-----------cc
Confidence 256789999999999999976 9999984 42 22233333 34577888877544333 46
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000504 1345 WSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLE 1422 (1458)
Q Consensus 1345 LSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE 1422 (1458)
|||||+||.+|||||.-+|+++++|||||+||++--..+.+++++.. .++|.++|||.+...++ +..|+.|.+|+|.|
T Consensus 153 LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE 232 (256)
T COG4598 153 LSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEE 232 (256)
T ss_pred cCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecc
Confidence 99999999999999999999999999999999999999999888764 58999999999999988 88999999999999
Q ss_pred ecChhHHhhcCCCh
Q 000504 1423 YDSPRQLLEDNSSS 1436 (1458)
Q Consensus 1423 ~g~p~~Ll~~~~s~ 1436 (1458)
.|+|+++..++.|.
T Consensus 233 ~G~P~qvf~nP~S~ 246 (256)
T COG4598 233 EGPPEQVFGNPQSP 246 (256)
T ss_pred cCChHHHhcCCCCH
Confidence 99999999998764
No 437
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=322.39 Aligned_cols=208 Identities=23% Similarity=0.276 Sum_probs=169.4
Q ss_pred cEEEEeeeEEeCC------------------CCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEE
Q 000504 1207 KIELENLLVQYNP------------------TLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILI 1268 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~------------------~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~I 1268 (1458)
.|+++||+..|+. ...++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~ 83 (264)
T PRK13546 4 SVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDR 83 (264)
T ss_pred eEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEE
Confidence 4777788776644 1235899999999999999999999999999999999999999999999
Q ss_pred cCeeCCCCCHHHHhcceEEEccCCCCcc-ccHHHhcCcC---CCCCHHHHH----HHHHHcCcHHHHHhcccccCccccC
Q 000504 1269 DGVDISMIGLQDLRSRLSIIPQDPMLFQ-GTVRTNLDPL---EQHSDQEIW----EVINKCHLAEIVRQDQRLLDAPVAE 1340 (1458)
Q Consensus 1269 DG~dI~~i~l~~LR~~i~iIpQdp~LF~-gTIR~NLdp~---~~~sdeeI~----~aL~~~~L~~~i~~lp~gLdt~v~e 1340 (1458)
||. +++++|++.++. .|+++|+... ...++++.. ++++..++.+.+ ..
T Consensus 84 ~g~-------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~ 139 (264)
T PRK13546 84 NGE-------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFI-----------YQ 139 (264)
T ss_pred CCE-------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cC
Confidence 994 467788886664 4999998531 123444433 345555554433 22
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCC
Q 000504 1341 DGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEG 1418 (1458)
Q Consensus 1341 ~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G 1418 (1458)
....||+|||||++||||++++|+||+|||||++||+.+.+.+.+.|++.. .++|+|+++|+++.+.. ||+|++|++|
T Consensus 140 ~~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G 219 (264)
T PRK13546 140 PVKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGG 219 (264)
T ss_pred CcccCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECC
Confidence 345799999999999999999999999999999999999999999988753 47899999999999865 9999999999
Q ss_pred EEEEecChhHHhhcCCChHH
Q 000504 1419 KVLEYDSPRQLLEDNSSSFS 1438 (1458)
Q Consensus 1419 ~ivE~g~p~~Ll~~~~s~F~ 1438 (1458)
++++.|++++++++....|+
T Consensus 220 ~i~~~g~~~~~~~~~~~~~~ 239 (264)
T PRK13546 220 KLKDYGELDDVLPKYEAFLN 239 (264)
T ss_pred EEEEeCCHHHHHHHhHHHHH
Confidence 99999999999875444333
No 438
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=321.98 Aligned_cols=203 Identities=26% Similarity=0.364 Sum_probs=166.0
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCcc-----CCCCcEEEECC---
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG--- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g--- 659 (1458)
..++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|.++ |++|++ .++|
T Consensus 12 ~~l~~~~l~~~~~~--------~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i-~~~g~~~ 82 (260)
T PRK10744 12 SKIQVRNLNFYYGK--------FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEI-LLDGENI 82 (260)
T ss_pred ceEEEEEEEEEeCC--------eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEE-EECCEEc
Confidence 45899999999963 358999 99999999999999999999999999999986 478986 5544
Q ss_pred ------------EEEEEcCCCCCCCCcHHHHHhcCCC----CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCC
Q 000504 660 ------------KKAYVPQSSWIQTGTIRENILFGKD----MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1458)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~enI~fg~~----~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~ 719 (1458)
.++|++|++.++..|++||+.++.. .+. ++.+++++..++..++. +..++...
T Consensus 83 ~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~ 155 (260)
T PRK10744 83 LTPKQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGY 155 (260)
T ss_pred cccccchHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCC
Confidence 3789999998888999999998642 222 22333444444432221 23456788
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEE
Q 000504 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1458)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~ 798 (1458)
+||||||||++||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 156 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 234 (260)
T PRK10744 156 SLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEE-LITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELI 234 (260)
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999998777765 55555567899999999999865 9999999999999
Q ss_pred Ecccchhhhh
Q 000504 799 QSGKYEDLIA 808 (1458)
Q Consensus 799 ~~g~~~~l~~ 808 (1458)
+.|+.+++..
T Consensus 235 ~~g~~~~~~~ 244 (260)
T PRK10744 235 EFGNTDTIFT 244 (260)
T ss_pred EeCCHHHHHh
Confidence 9999888865
No 439
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.3e-33 Score=316.48 Aligned_cols=197 Identities=26% Similarity=0.428 Sum_probs=158.8
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 71 (222)
T cd03224 1 LEVENLNAGYGK--------SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSI-RFDGRDITGLPPHE 71 (222)
T ss_pred CEEeeEEeecCC--------eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEEcCCCCHHH
Confidence 468899999853 357899 99999999999999999999999999999999999986 6655
Q ss_pred ----EEEEEcCCCCCCCC-cHHHHHhcCCCCC--HH---HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 660 ----KKAYVPQSSWIQTG-TIRENILFGKDMR--QS---FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 660 ----~~ayv~Q~~~i~~~-Ti~enI~fg~~~~--~~---~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
.++|++|++.++.. |++||+.++.... .+ +.+++++.. ..+ ....+.+..+||||||||+
T Consensus 72 ~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~------~~l----~~~~~~~~~~LS~G~~qrv 141 (222)
T cd03224 72 RARAGIGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELF------PRL----KERRKQLAGTLSGGEQQML 141 (222)
T ss_pred HHhcCeEEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHH------Hhh----hhhhhCchhhCCHHHHHHH
Confidence 27999999987764 9999999875432 11 111222221 111 1123466789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchhhh
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLI 807 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~ 807 (1458)
+||||+..+|+++||||||++||+.+...+.+ ++..+. +++|+|++||+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 142 ~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 142 AIARALMSRPKLLLLDEPSEGLAPKIVEEIFE-AIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHHHHhcCCCEEEECCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 99999999999999999999999999877765 454443 57999999999998765 9999999999999998877664
No 440
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=325.22 Aligned_cols=198 Identities=30% Similarity=0.437 Sum_probs=163.2
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+.. .+.+++ ||+|++||+++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 2 l~~~~l~~~~~~~-------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~~ 73 (274)
T PRK13644 2 IRLENVSYSYPDG-------TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKV-LVSGIDTGDFSKLQ 73 (274)
T ss_pred EEEEEEEEEcCCC-------CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EECCEECCccccHH
Confidence 6789999999632 358999 99999999999999999999999999999999999986 6654
Q ss_pred ----EEEEEcCCCC--CCCCcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHH
Q 000504 660 ----KKAYVPQSSW--IQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1458)
Q Consensus 660 ----~~ayv~Q~~~--i~~~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 726 (1458)
.++|++|+|. +++.|++|||.++.. .+. ++.+++++.+++.. .......+||||||
T Consensus 74 ~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G~~ 142 (274)
T PRK13644 74 GIRKLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEK-----------YRHRSPKTLSGGQG 142 (274)
T ss_pred HHHhheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHH-----------HhcCCcccCCHHHH
Confidence 2699999986 467899999998742 122 22333344444322 23456679999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhccCCEEEEEeCCeEEEcccchh
Q 000504 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYED 805 (1458)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~ 805 (1458)
||++||||++.+|+++||||||++||+.+...+++. +..+. +++|+|++||+++.++.||+|++|++|++++.|+.++
T Consensus 143 qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~ 221 (274)
T PRK13644 143 QCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLER-IKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPEN 221 (274)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999998877764 44443 5899999999999987899999999999999999888
Q ss_pred hhh
Q 000504 806 LIA 808 (1458)
Q Consensus 806 l~~ 808 (1458)
+..
T Consensus 222 ~~~ 224 (274)
T PRK13644 222 VLS 224 (274)
T ss_pred Hhc
Confidence 764
No 441
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.3e-33 Score=318.59 Aligned_cols=197 Identities=26% Similarity=0.398 Sum_probs=159.8
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~~ 71 (232)
T cd03218 1 LRAENLSKRYGK--------RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKI-LLDGQDITKLPMHK 71 (232)
T ss_pred CeEEEEEEEeCC--------EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEecccCCHhH
Confidence 468899999963 358899 99999999999999999999999999999999999986 6654
Q ss_pred ----EEEEEcCCCCCCCC-cHHHHHhcCCCC---CHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHH
Q 000504 660 ----KKAYVPQSSWIQTG-TIRENILFGKDM---RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1458)
Q Consensus 660 ----~~ayv~Q~~~i~~~-Ti~enI~fg~~~---~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 727 (1458)
.++|++|++.++.. |++||+.++.+. ... +.++.++..++ ....+....+|||||||
T Consensus 72 ~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~q 140 (232)
T cd03218 72 RARLGIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHI-----------THLRKSKASSLSGGERR 140 (232)
T ss_pred HHhccEEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------hhhhhCChhhCCHHHHH
Confidence 27999999987765 999999875321 111 11222222222 12345667899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchh
Q 000504 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYED 805 (1458)
Q Consensus 728 Rv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~ 805 (1458)
|++||||+..+|+++||||||++||+.+.+.+.+ +++.+. .++|+|++||+++.+.. ||+|++|++|++.+.|+.++
T Consensus 141 rl~la~al~~~p~llllDEPt~~LD~~~~~~~~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 219 (232)
T cd03218 141 RVEIARALATNPKFLLLDEPFAGVDPIAVQDIQK-IIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEE 219 (232)
T ss_pred HHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHH
Confidence 9999999999999999999999999999887765 454443 47899999999998765 99999999999999998887
Q ss_pred hhh
Q 000504 806 LIA 808 (1458)
Q Consensus 806 l~~ 808 (1458)
+..
T Consensus 220 ~~~ 222 (232)
T cd03218 220 IAA 222 (232)
T ss_pred hhc
Confidence 754
No 442
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-33 Score=320.66 Aligned_cols=195 Identities=28% Similarity=0.342 Sum_probs=161.4
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1458)
..++++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 11 ~~l~i~~l~~~~~~--------~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i-~~~g~~~~~~~~ 81 (257)
T PRK11247 11 TPLLLNAVSKRYGE--------RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGEL-LAGTAPLAEARE 81 (257)
T ss_pred CcEEEEEEEEEECC--------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEE-EECCEEHHHhhC
Confidence 45899999999963 358899 99999999999999999999999999999999999987 6665
Q ss_pred EEEEEcCCCCCCC-CcHHHHHhcCCCC-CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHcc
Q 000504 660 KKAYVPQSSWIQT-GTIRENILFGKDM-RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYS 737 (1458)
Q Consensus 660 ~~ayv~Q~~~i~~-~Ti~enI~fg~~~-~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~ 737 (1458)
.++|++|++.++. .|++||+.++... .+++.++.++..++.. ..+....+||||||||++||||++.
T Consensus 82 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgGqkqrl~laraL~~ 150 (257)
T PRK11247 82 DTRLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLAD-----------RANEWPAALSGGQKQRVALARALIH 150 (257)
T ss_pred ceEEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChh-----------HhcCChhhCCHHHHHHHHHHHHHhc
Confidence 3799999988765 6999999986421 1233444455444432 2345678999999999999999999
Q ss_pred CCCEEEEeCCCCCCChhhHHHHHHHHHHHH-h-CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccch
Q 000504 738 NSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-L-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYE 804 (1458)
Q Consensus 738 ~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~ 804 (1458)
+|+++||||||++||+.+...+.+ ++..+ . .++|+|++||+++++.. ||+|++|++|++++.|+.+
T Consensus 151 ~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 151 RPGLLLLDEPLGALDALTRIEMQD-LIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999877765 45444 2 37999999999999864 9999999999999887754
No 443
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.4e-33 Score=330.25 Aligned_cols=200 Identities=31% Similarity=0.440 Sum_probs=162.8
Q ss_pred CccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC-------
Q 000504 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------- 659 (1458)
Q Consensus 588 ~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------- 659 (1458)
+..++++|++++|+. .+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 2 ~~~i~~~~l~~~~~~--------~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~ 72 (303)
T TIGR01288 2 NVAIDLVGVSKSYGD--------KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKI-TVLGEPVPSRA 72 (303)
T ss_pred CcEEEEEeEEEEeCC--------eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEECcccH
Confidence 346899999999963 358999 99999999999999999999999999999999999987 6665
Q ss_pred -----EEEEEcCCCCCC-CCcHHHHHhcCCC---CCHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHH
Q 000504 660 -----KKAYVPQSSWIQ-TGTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1458)
Q Consensus 660 -----~~ayv~Q~~~i~-~~Ti~enI~fg~~---~~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 726 (1458)
.++|++|++.++ ..|++||+.+... .+.. +.+++++.+++.+ ....+..+||||||
T Consensus 73 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~-----------~~~~~~~~LSgG~~ 141 (303)
T TIGR01288 73 RLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-----------KADVRVALLSGGMK 141 (303)
T ss_pred HHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChh-----------HhcCchhhCCHHHH
Confidence 379999998876 4699999975221 2221 1222333333321 23455678999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccch
Q 000504 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYE 804 (1458)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~ 804 (1458)
||++||||++.+|+++||||||++||+.+...+.+ .+..+ .+++|+|++||+++++.. ||+|++|++|+++..|+.+
T Consensus 142 qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 220 (303)
T TIGR01288 142 RRLTLARALINDPQLLILDEPTTGLDPHARHLIWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPH 220 (303)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHH
Confidence 99999999999999999999999999999887766 44444 358999999999999875 9999999999999999988
Q ss_pred hhhh
Q 000504 805 DLIA 808 (1458)
Q Consensus 805 ~l~~ 808 (1458)
++..
T Consensus 221 ~~~~ 224 (303)
T TIGR01288 221 ALID 224 (303)
T ss_pred HHHh
Confidence 8754
No 444
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-34 Score=326.50 Aligned_cols=185 Identities=33% Similarity=0.453 Sum_probs=152.5
Q ss_pred cccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC-----------------EEEEEcCCCCCC-
Q 000504 611 TIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-----------------KKAYVPQSSWIQ- 671 (1458)
Q Consensus 611 ~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-----------------~~ayv~Q~~~i~- 671 (1458)
.+.+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++| .++|++|++.++
T Consensus 37 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i-~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 115 (269)
T cd03294 37 TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKV-LIDGQDIAAMSRKELRELRRKKISMVFQSFALLP 115 (269)
T ss_pred ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEE-EECCEEccccChhhhhhhhcCcEEEEecCcccCC
Confidence 357899 99999999999999999999999999999999999986 5544 479999999887
Q ss_pred CCcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEE
Q 000504 672 TGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIF 744 (1458)
Q Consensus 672 ~~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lL 744 (1458)
+.|++||+.++.. .+. ++.+++++.+++.+. ......+||||||||++||||++.+|+++||
T Consensus 116 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 116 HRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGW-----------EHKYPDELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred CCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhH-----------hhCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 5699999987532 111 223444444444322 2345568999999999999999999999999
Q ss_pred eCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchhhhh
Q 000504 745 DDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 745 Dep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 808 (1458)
||||++||+.+.+.+.+ ++..+. .++|+|++||+++.+.. ||++++|++|++.+.|+.+++.+
T Consensus 185 DEPt~~LD~~~~~~l~~-~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 185 DEAFSALDPLIRREMQD-ELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred cCCCccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999887765 454443 37999999999998765 99999999999999999988865
No 445
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1e-33 Score=315.25 Aligned_cols=190 Identities=31% Similarity=0.430 Sum_probs=154.7
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 1 i~~~~l~~~~~~--------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v-~~~g~~~~~~~~~~ 71 (213)
T cd03301 1 VELENVTKRFGN--------VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRI-YIGGRDVTDLPPKD 71 (213)
T ss_pred CEEEeeEEEECC--------eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEECCcCCccc
Confidence 468899999863 357899 99999999999999999999999999999999999986 6655
Q ss_pred -EEEEEcCCCCCCC-CcHHHHHhcCCC---CCHHH----HHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHH
Q 000504 660 -KKAYVPQSSWIQT-GTIRENILFGKD---MRQSF----YEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1458)
Q Consensus 660 -~~ayv~Q~~~i~~-~Ti~enI~fg~~---~~~~~----y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 730 (1458)
.++|++|++.++. .|++||+.++.. ...+. .++.++..++. ........+||||||||++
T Consensus 72 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qr~~ 140 (213)
T cd03301 72 RDIAMVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIE-----------HLLDRKPKQLSGGQRQRVA 140 (213)
T ss_pred ceEEEEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-----------HHHhCChhhCCHHHHHHHH
Confidence 3799999998874 699999987632 12222 22233333332 1234566799999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
||||++.+|+++||||||++||+++.+.+.+ +++.+. .++|+|++||+++++.. ||+|++|++|++++.|
T Consensus 141 laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 141 LGRAIVREPKVFLMDEPLSNLDAKLRVQMRA-ELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999999887766 454443 37999999999998875 9999999999998765
No 446
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=327.04 Aligned_cols=204 Identities=24% Similarity=0.400 Sum_probs=164.1
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+.... ...+.++| ||++++||+++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 2 ~i~~~~l~~~~~~~~~---~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i-~~~g~~~~~~~~~ 77 (287)
T PRK13641 2 SIKFENVDYIYSPGTP---MEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTI-TIAGYHITPETGN 77 (287)
T ss_pred EEEEEEEEEEcCCCCC---ccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE-EECCEECcccccc
Confidence 4789999999974200 01468999 99999999999999999999999999999999999986 6655
Q ss_pred --------EEEEEcCCC--CCCCCcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCC
Q 000504 660 --------KKAYVPQSS--WIQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1458)
Q Consensus 660 --------~~ayv~Q~~--~i~~~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LS 722 (1458)
.++|++|+| .++..|++|||.|+.. ... ++.+++++.+++..+ ....+..+||
T Consensus 78 ~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LS 147 (287)
T PRK13641 78 KNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSED----------LISKSPFELS 147 (287)
T ss_pred chHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhhCCcccCC
Confidence 269999997 4667899999987632 221 122333444444311 1245677999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCeEEEc
Q 000504 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQS 800 (1458)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~ 800 (1458)
||||||++||||++.+|+++||||||++||+.+...+.+ ++..+. ++.|+|++||+++++.. ||+|++|++|++++.
T Consensus 148 gGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~-~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~ 226 (287)
T PRK13641 148 GGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQ-LFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKH 226 (287)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999998777765 555543 47999999999999864 999999999999999
Q ss_pred ccchhhhh
Q 000504 801 GKYEDLIA 808 (1458)
Q Consensus 801 g~~~~l~~ 808 (1458)
|+.+++..
T Consensus 227 g~~~~~~~ 234 (287)
T PRK13641 227 ASPKEIFS 234 (287)
T ss_pred CCHHHHhc
Confidence 99888764
No 447
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.8e-33 Score=318.31 Aligned_cols=197 Identities=22% Similarity=0.393 Sum_probs=162.1
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+. .+.+++ |+++++|++++|+|+||||||||+++|+|..+|++|++ .++|
T Consensus 2 l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i-~~~g~~i~~~~~~~ 72 (236)
T TIGR03864 2 LEVAGLSFAYGA--------RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQI-SVAGHDLRRAPRAA 72 (236)
T ss_pred EEEEeeEEEECC--------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEE-EECCEEcccCChhh
Confidence 678999999863 358999 99999999999999999999999999999999999986 6665
Q ss_pred --EEEEEcCCCCC-CCCcHHHHHhcCCCC---CHHH----HHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 660 --KKAYVPQSSWI-QTGTIRENILFGKDM---RQSF----YEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 660 --~~ayv~Q~~~i-~~~Ti~enI~fg~~~---~~~~----y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
.++|++|++.+ +..|++||+.++... .... .++.++..++ ....+.+..+||||||||+
T Consensus 73 ~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~qrl 141 (236)
T TIGR03864 73 LARLGVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGL-----------AERADDKVRELNGGHRRRV 141 (236)
T ss_pred hhhEEEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------hhhhcCChhhCCHHHHHHH
Confidence 37999999877 568999999875321 1111 1222222222 2234567789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhccCCEEEEEeCCeEEEcccchhhh
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLI 807 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~ 807 (1458)
+||||++.+|+++||||||++||+.+.+.+.+ .+..+. +++|+|++||+++++..||+|++|++|++++.|+.+++.
T Consensus 142 ~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (236)
T TIGR03864 142 EIARALLHRPALLLLDEPTVGLDPASRAAIVA-HVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELR 220 (236)
T ss_pred HHHHHHhcCCCEEEEcCCccCCCHHHHHHHHH-HHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 99999999999999999999999999888776 455443 479999999999998889999999999999999988776
Q ss_pred h
Q 000504 808 A 808 (1458)
Q Consensus 808 ~ 808 (1458)
+
T Consensus 221 ~ 221 (236)
T TIGR03864 221 G 221 (236)
T ss_pred H
Confidence 5
No 448
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=323.55 Aligned_cols=204 Identities=23% Similarity=0.354 Sum_probs=166.7
Q ss_pred CccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC-----CCCcEEEECC--
Q 000504 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG-- 659 (1458)
Q Consensus 588 ~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g-- 659 (1458)
+..++++|++++|+. .+.++| ||+|++|++++|+|+||||||||+++|+|+++| ++|++ .++|
T Consensus 17 ~~~l~~~nl~~~~~~--------~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I-~~~g~~ 87 (267)
T PRK14235 17 EIKMRARDVSVFYGE--------KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKI-TLDGED 87 (267)
T ss_pred CceEEEEeEEEEECC--------EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEE-EECCEE
Confidence 457999999999963 358999 999999999999999999999999999999874 88986 5554
Q ss_pred -------------EEEEEcCCCCCCCCcHHHHHhcCCCC-----C----HHHHHHHHHHhhhhhhHHhhcCCCcccccCC
Q 000504 660 -------------KKAYVPQSSWIQTGTIRENILFGKDM-----R----QSFYEEVLEGCALNQDIEMWADGDLSVVGER 717 (1458)
Q Consensus 660 -------------~~ayv~Q~~~i~~~Ti~enI~fg~~~-----~----~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~ 717 (1458)
.++|++|++.++..|++||+.++..+ . .++.+++++.+++.+++. +..+..
T Consensus 88 i~~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~ 160 (267)
T PRK14235 88 IYDPRLDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEP 160 (267)
T ss_pred CcccccchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCC
Confidence 36999999998878999999986421 1 122334444444433221 123566
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCe
Q 000504 718 GINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGK 796 (1458)
Q Consensus 718 g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~ 796 (1458)
+.+||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++++.. ||++++|++|+
T Consensus 161 ~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~ 239 (267)
T PRK14235 161 GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEE-LIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGN 239 (267)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCE
Confidence 78999999999999999999999999999999999998777654 56655567899999999999865 99999999999
Q ss_pred EEEcccchhhhh
Q 000504 797 IEQSGKYEDLIA 808 (1458)
Q Consensus 797 i~~~g~~~~l~~ 808 (1458)
+++.|+.+++..
T Consensus 240 i~~~g~~~~~~~ 251 (267)
T PRK14235 240 LVEVGDTEKMFT 251 (267)
T ss_pred EEEeCCHHHHHh
Confidence 999999888764
No 449
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-33 Score=326.01 Aligned_cols=199 Identities=24% Similarity=0.411 Sum_probs=165.5
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+.+ .+.+++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 5 ~l~~~~l~~~~~~~-------~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i-~i~g~~~~~~~~~ 76 (283)
T PRK13636 5 ILKVEELNYNYSDG-------THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRI-LFDGKPIDYSRKG 76 (283)
T ss_pred eEEEEeEEEEeCCC-------CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEE-EECCEECCCCcch
Confidence 58999999999632 358999 99999999999999999999999999999999999986 6665
Q ss_pred ------EEEEEcCCC--CCCCCcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChH
Q 000504 660 ------KKAYVPQSS--WIQTGTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1458)
Q Consensus 660 ------~~ayv~Q~~--~i~~~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGG 724 (1458)
.++|++|+| .+++.|++||+.++.. +.. ++.+++++.++|.. .....+.+||||
T Consensus 77 ~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LS~G 145 (283)
T PRK13636 77 LMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEH-----------LKDKPTHCLSFG 145 (283)
T ss_pred HHHHHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhCCcccCCHH
Confidence 269999998 5678899999988532 111 22344445444432 234567899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhc-cCCEEEEEeCCeEEEcc
Q 000504 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLD-AADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g 801 (1458)
||||++|||||+.+|+++||||||++||+.+...+.+ ++..+. + ++|||++||+++++. .||+|++|++|++++.|
T Consensus 146 ~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g 224 (283)
T PRK13636 146 QKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMK-LLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQG 224 (283)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999887765 455443 3 799999999999987 59999999999999999
Q ss_pred cchhhhh
Q 000504 802 KYEDLIA 808 (1458)
Q Consensus 802 ~~~~l~~ 808 (1458)
+++++..
T Consensus 225 ~~~~~~~ 231 (283)
T PRK13636 225 NPKEVFA 231 (283)
T ss_pred CHHHHhc
Confidence 9988865
No 450
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-33 Score=317.96 Aligned_cols=201 Identities=28% Similarity=0.402 Sum_probs=161.1
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+... ...+.+++ ||++++||+++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 2 i~~~~l~~~~~~~~----~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 76 (233)
T cd03258 2 IELKNVSKVFGDTG----GKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSV-LVDGTDLTLLSGKE 76 (233)
T ss_pred eEEecceEEccCCC----CceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEEcccCCHHH
Confidence 67899999996320 11268999 99999999999999999999999999999999999986 5554
Q ss_pred ------EEEEEcCCCCCCC-CcHHHHHhcCCC---CCHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 ------KKAYVPQSSWIQT-GTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~enI~fg~~---~~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
.++|++|++.++. .|++||+.++.. .+.. +.++.++..++. ........+|||||
T Consensus 77 ~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~ 145 (233)
T cd03258 77 LRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLE-----------DKADAYPAQLSGGQ 145 (233)
T ss_pred HHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-----------hhhhcChhhCCHHH
Confidence 3799999998875 699999987532 1211 122223333322 22345667999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhcc-CCEEEEEeCCeEEEccc
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~ 802 (1458)
|||++||||+..+|+++||||||++||+.+...+.+ ++..+. + ++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 146 ~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 224 (233)
T cd03258 146 KQRVGIARALANNPKVLLCDEATSALDPETTQSILA-LLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGT 224 (233)
T ss_pred HHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999999999999999877765 454443 3 7899999999999865 99999999999999998
Q ss_pred chhhhh
Q 000504 803 YEDLIA 808 (1458)
Q Consensus 803 ~~~l~~ 808 (1458)
.+++.+
T Consensus 225 ~~~~~~ 230 (233)
T cd03258 225 VEEVFA 230 (233)
T ss_pred HHHHhc
Confidence 877654
No 451
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=321.63 Aligned_cols=202 Identities=22% Similarity=0.367 Sum_probs=163.9
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCcc--C---CCCcEEEECC----
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP--R---ISGAAIKVHG---- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~--~---~~G~~i~~~g---- 659 (1458)
.++++|+++.|+. .+.+++ ||+|++||+++|+|+||||||||+++|+|.++ | ++|++ .++|
T Consensus 12 ~l~i~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i-~~~g~~~~ 82 (259)
T PRK14274 12 VYQINGMNLWYGQ--------HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEM-NYNGSNIL 82 (259)
T ss_pred eEEEeeEEEEECC--------eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEE-EECCEEcc
Confidence 5899999999863 358999 99999999999999999999999999999987 3 58976 5544
Q ss_pred -----------EEEEEcCCCCCCCCcHHHHHhcCCCC----CHHH----HHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQSF----YEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~~~~----y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++|++|++.++..|++||+.++... +++. .+++++..++.+.+. +..+..+.+
T Consensus 83 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~ 155 (259)
T PRK14274 83 KGKVDLVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALS 155 (259)
T ss_pred ccccCHHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCccc
Confidence 37999999998888999999886422 1111 122333333322211 234567789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
||||||||++||||++.+|+++||||||++||+++...+.+ ++..+.+++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 156 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~ 234 (259)
T PRK14274 156 LSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEE-LILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVE 234 (259)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999998777654 66666567999999999999865 99999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+.+++..
T Consensus 235 ~g~~~~~~~ 243 (259)
T PRK14274 235 CNDTNKMFS 243 (259)
T ss_pred ECCHHHHhh
Confidence 999988865
No 452
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-33 Score=317.51 Aligned_cols=196 Identities=27% Similarity=0.343 Sum_probs=158.9
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+... ...+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 5 ~l~~~~l~~~~~~~~----~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~i~~~~~~ 79 (233)
T PRK11629 5 LLQCDNLCKRYQEGS----VQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDV-IFNGQPMSKLSSA 79 (233)
T ss_pred eEEEEeEEEEcCCCC----cceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEE-EECCEEcCcCCHH
Confidence 489999999997430 12468999 99999999999999999999999999999999999986 6654
Q ss_pred --------EEEEEcCCCCCCC-CcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCCh
Q 000504 660 --------KKAYVPQSSWIQT-GTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1458)
Q Consensus 660 --------~~ayv~Q~~~i~~-~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSG 723 (1458)
.++|++|++.++. .|++||+.++.. .+. ++.+++++.+++. ........+|||
T Consensus 80 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LSg 148 (233)
T PRK11629 80 AKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLE-----------HRANHRPSELSG 148 (233)
T ss_pred HHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-----------hhhhCChhhCCH
Confidence 3799999988765 599999987421 121 2223344444332 223456678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhccCCEEEEEeCCeEEEcc
Q 000504 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g 801 (1458)
|||||++||||++.+|+++||||||++||+.+...+.+ .+..+. +++|+|++||+++++..+|++++|++|+|++.|
T Consensus 149 G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~ 227 (233)
T PRK11629 149 GERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQ-LLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAEL 227 (233)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEe
Confidence 99999999999999999999999999999999877765 455443 479999999999999888899999999998876
Q ss_pred c
Q 000504 802 K 802 (1458)
Q Consensus 802 ~ 802 (1458)
+
T Consensus 228 ~ 228 (233)
T PRK11629 228 S 228 (233)
T ss_pred c
Confidence 5
No 453
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=9.2e-34 Score=356.62 Aligned_cols=211 Identities=27% Similarity=0.445 Sum_probs=175.0
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccC--CCCCcEEEEc----------------
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVV--EPSGGRILID---------------- 1269 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--~p~~G~I~ID---------------- 1269 (1458)
|+++|++++|.. ..+|+|+||++++||++||+|+||||||||+++|.|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~ 78 (520)
T TIGR03269 1 IEVKNLTKKFDG--KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKV 78 (520)
T ss_pred CEEEEEEEEECC--eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccc
Confidence 578999999963 35999999999999999999999999999999999996 7999999997
Q ss_pred -------CeeCC-------CCC---HHHHhcceEEEccC-CCCccc-cHHHhcCc-C--CCCC----HHHHHHHHHHcCc
Q 000504 1270 -------GVDIS-------MIG---LQDLRSRLSIIPQD-PMLFQG-TVRTNLDP-L--EQHS----DQEIWEVINKCHL 1323 (1458)
Q Consensus 1270 -------G~dI~-------~i~---l~~LR~~i~iIpQd-p~LF~g-TIR~NLdp-~--~~~s----deeI~~aL~~~~L 1323 (1458)
|.++. ..+ ...+|++++++||+ +.+|.. |+++|+.. . ...+ ++++.++++.+++
T Consensus 79 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl 158 (520)
T TIGR03269 79 GEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQL 158 (520)
T ss_pred ccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC
Confidence 33331 111 23467889999998 577764 99999853 1 1122 2346677888887
Q ss_pred HHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCcEEEEEec
Q 000504 1324 AEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET--SRCTVITVAH 1401 (1458)
Q Consensus 1324 ~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~--~~~TVI~IAH 1401 (1458)
.+... ..+ .+||||||||++|||||+.+|++|+|||||++||+++.+.+.+.|++.. .++|||+|+|
T Consensus 159 ~~~~~-------~~~----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtH 227 (520)
T TIGR03269 159 SHRIT-------HIA----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSH 227 (520)
T ss_pred hhhhh-------cCc----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeC
Confidence 55432 222 4699999999999999999999999999999999999999999998863 3789999999
Q ss_pred Chhhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000504 1402 RIPTVID-NDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1402 rl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~ 1431 (1458)
+++.+.. ||+|++|++|++++.|+++++++
T Consensus 228 d~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 258 (520)
T TIGR03269 228 WPEVIEDLSDKAIWLENGEIKEEGTPDEVVA 258 (520)
T ss_pred CHHHHHHhcCEEEEEeCCEEeeecCHHHHHH
Confidence 9999875 99999999999999999988865
No 454
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.1e-33 Score=310.31 Aligned_cols=188 Identities=19% Similarity=0.325 Sum_probs=160.0
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
|+++|++++|++ +.++ ++||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++.... ++.++|
T Consensus 2 l~~~~l~~~~~~--~~l~-~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~----~~~~~~ 74 (195)
T PRK13541 2 LSLHQLQFNIEQ--KNLF-DLSITFLPSAITYIKGANGCGKSSLLRMIAGIMQPSSGNIYYKNCNINNIA----KPYCTY 74 (195)
T ss_pred eEEEEeeEEECC--cEEE-EEEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCcccChhh----hhhEEe
Confidence 789999999964 3344 599999999999999999999999999999999999999999999886542 456999
Q ss_pred EccCCC-CccccHHHhcCcCC-C-CCHHHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhccCCC
Q 000504 1288 IPQDPM-LFQGTVRTNLDPLE-Q-HSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKR 1364 (1458)
Q Consensus 1288 IpQdp~-LF~gTIR~NLdp~~-~-~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ 1364 (1458)
+||++. +|..|+++|+.... . ..++++.++++.+++.+...+ .+.+||+|||||++||||++++|+
T Consensus 75 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~~rl~la~al~~~p~ 143 (195)
T PRK13541 75 IGHNLGLKLEMTVFENLKFWSEIYNSAETLYAAIHYFKLHDLLDE-----------KCYSLSSGMQKIVAIARLIACQSD 143 (195)
T ss_pred ccCCcCCCccCCHHHHHHHHHHhcccHHHHHHHHHHcCCHhhhcc-----------ChhhCCHHHHHHHHHHHHHhcCCC
Confidence 999975 46789999996422 1 135677888888888655432 345799999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecChhhhhhcCEEE
Q 000504 1365 ILVLDEATASIDTATDNVIQQTIREE-TSRCTVITVAHRIPTVIDNDLVL 1413 (1458)
Q Consensus 1365 ILlLDEaTsslD~~Td~~Iq~~I~~~-~~~~TVI~IAHrl~ti~~~DrVl 1413 (1458)
+|+|||||+++|+.+.+.+.+.|++. .+++|+|+|+|+++.+..+|-|.
T Consensus 144 ~lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~ 193 (195)
T PRK13541 144 LWLLDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLESSIKSAQILQ 193 (195)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCccccchhheec
Confidence 99999999999999999999999753 35799999999999999998764
No 455
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=1.1e-30 Score=306.11 Aligned_cols=337 Identities=19% Similarity=0.254 Sum_probs=237.9
Q ss_pred HHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhh------cCCCcCHH
Q 000504 1070 SESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLIILVTL------PRSAIDPS 1143 (1458)
Q Consensus 1070 ~Etl~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~~~~------~~~~~~~~ 1143 (1458)
++-..+...|--|+.++......+...++.............|+.+..+++--+... ...+++.. +.+..+|.
T Consensus 269 ~rlr~NaE~iAFY~g~~~E~~~~~~~f~~Lv~~l~~l~~~r~~l~f~~n~~~Ylg~i-lsy~vi~~p~Fs~h~y~~~s~a 347 (659)
T KOG0060|consen 269 SRLRVNAEEIAFYRGGQVEHQRTDQRFRNLVQHLRELMSFRFWLGFIDNIFDYLGGI-LSYVVIAIPFFSGHVYDDLSPA 347 (659)
T ss_pred eeeeecchhhhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-heeeEEeeeeecccccCCcCHH
Confidence 444566777777877665554444444444444445556677888776665522211 11111111 22334444
Q ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcC----C-------------CCCccccC-CCCCCCC
Q 000504 1144 LAGLAAT----YGLNLNVLQAWVIWNLCNVENKMISVERILQFTNI----P-------------SEAPLVIK-NSRPSPE 1201 (1458)
Q Consensus 1144 ~~gl~l~----y~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~----~-------------~E~~~~~~-~~~~~~~ 1201 (1458)
..--.++ +.+.+...+..++....++..-..-..||-|+.+. . .|..+... .+..+..
T Consensus 348 EL~~~i~~na~~~i~Li~~f~~l~~~~~~ls~lsGyt~Ri~el~~~l~d~~~~~~~~~~~~~~~~E~~~~l~~~~G~~~~ 427 (659)
T KOG0060|consen 348 ELSGLISNNAFVFIYLISAFGRLVDLSRDLSRLSGYTHRIGELMEVLDDLSSGSQECTMEEEELGEAEWGLSLPPGSGKA 427 (659)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHHhccCCcchhhhhhhhhhhhhccCCCCCCccc
Confidence 3222221 22223333333333333333333445677777531 1 11111110 0111356
Q ss_pred CCCCccEEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHH
Q 000504 1202 WPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDL 1281 (1458)
Q Consensus 1202 wp~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~L 1281 (1458)
||....|+|++|++.-+.+.+.+.+|+||+|+.|+.+-|+||||||||||++.|.|+.+..+|+|.--...-.
T Consensus 428 ~~~Dn~i~~e~v~l~tPt~g~~lie~Ls~~V~~g~~LLItG~sG~GKtSLlRvlggLWp~~~G~l~k~~~~~~------- 500 (659)
T KOG0060|consen 428 EPADNAIEFEEVSLSTPTNGDLLIENLSLEVPSGQNLLITGPSGCGKTSLLRVLGGLWPSTGGKLTKPTDGGP------- 500 (659)
T ss_pred ccccceEEeeeeeecCCCCCceeeeeeeeEecCCCeEEEECCCCCchhHHHHHHhcccccCCCeEEecccCCC-------
Confidence 7888889999999998776777788899999999999999999999999999999999999999875432111
Q ss_pred hcceEEEccCCCCccccHHHhcC-cC-------CCCCHHHHHHHHHHcCcHHHHHhcccccCcccc-CCCCCCChhHHHH
Q 000504 1282 RSRLSIIPQDPMLFQGTVRTNLD-PL-------EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVA-EDGENWSVGQRQL 1352 (1458)
Q Consensus 1282 R~~i~iIpQdp~LF~gTIR~NLd-p~-------~~~sdeeI~~aL~~~~L~~~i~~lp~gLdt~v~-e~G~nLSgGQrQr 1352 (1458)
+.+-++||.|++-.||+|+-+- |. +..+|++|.+.|+.++|.+.+... +|+|.++. +=.+-||+||+||
T Consensus 501 -~~lfflPQrPYmt~GTLRdQvIYP~~~~~~~~~~~~d~~i~r~Le~v~L~hl~~r~-ggld~~~~~dW~dvLS~GEqQR 578 (659)
T KOG0060|consen 501 -KDLFFLPQRPYMTLGTLRDQVIYPLKAEDMDSKSASDEDILRILENVQLGHLLERE-GGLDQQVDWDWMDVLSPGEQQR 578 (659)
T ss_pred -CceEEecCCCCccccchhheeeccCccccccccCCCHHHHHHHHHHhhhhhHHHHh-CCCCchhhccHHhhcCHHHHHH
Confidence 3589999999999999999973 52 246899999999999999888764 89997664 3456799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCcEEEEEecChhhhhhcCEEEEEeCC
Q 000504 1353 VCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEG 1418 (1458)
Q Consensus 1353 l~LARALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHrl~ti~~~DrVlvL~~G 1418 (1458)
+|+||.++.+|++-+|||+||+||.+.|..+-+.+|+. +-|.|+|.||-+..+..|.++-|+.+
T Consensus 579 La~ARLfy~kPk~AiLDE~TSAv~~dvE~~~Yr~~r~~--giT~iSVgHRkSL~kfHd~~L~~~g~ 642 (659)
T KOG0060|consen 579 LAFARLFYHKPKFAILDECTSAVTEDVEGALYRKCREM--GITFISVGHRKSLWKFHDYVLRMDGR 642 (659)
T ss_pred HHHHHHHhcCCceEEeechhhhccHHHHHHHHHHHHHc--CCeEEEeccHHHHHhhhhEEEEecCC
Confidence 99999999999999999999999999999999999984 88999999999999999999999864
No 456
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.7e-33 Score=304.41 Aligned_cols=165 Identities=28% Similarity=0.551 Sum_probs=147.6
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE---------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--------- 660 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--------- 660 (1458)
++++|++++|+.. ..+.+++ ||++++||+++|+|+||||||||+++|+|+.+|++|++ .++|.
T Consensus 1 i~~~~~~~~~~~~------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 73 (178)
T cd03247 1 LSINNVSFSYPEQ------EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEI-TLDGVPVSDLEKAL 73 (178)
T ss_pred CEEEEEEEEeCCC------CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEE-EECCEEHHHHHHHH
Confidence 4688999999643 2368999 99999999999999999999999999999999999987 77763
Q ss_pred ---EEEEcCCCCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHcc
Q 000504 661 ---KAYVPQSSWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYS 737 (1458)
Q Consensus 661 ---~ayv~Q~~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~ 737 (1458)
++|++|++++++.|++||+ ..+||||||||++||||++.
T Consensus 74 ~~~i~~~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~ 115 (178)
T cd03247 74 SSLISVLNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQ 115 (178)
T ss_pred HhhEEEEccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhc
Confidence 7999999999889999998 45899999999999999999
Q ss_pred CCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCCeEEEcc
Q 000504 738 NSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 738 ~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g 801 (1458)
+|+++||||||++||+++.+.+++ .+..+.+++|+|++||++++++.||++++|++|++++.|
T Consensus 116 ~p~~lllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 116 DAPIVLLDEPTVGLDPITERQLLS-LIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred CCCEEEEECCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999877765 455555689999999999999889999999999998754
No 457
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-33 Score=334.76 Aligned_cols=202 Identities=24% Similarity=0.309 Sum_probs=169.2
Q ss_pred cEEEEeeeEEeCCCC-CcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcce
Q 000504 1207 KIELENLLVQYNPTL-PMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1207 ~I~~~nvs~~Y~~~~-~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i 1285 (1458)
.++++|++++|..+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.+.
T Consensus 21 mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~------------ 88 (549)
T PRK13545 21 FDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA------------ 88 (549)
T ss_pred eeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee------------
Confidence 589999999997642 3699999999999999999999999999999999999999999999999751
Q ss_pred EEEccCCCCcc-ccHHHhcCcC---CCCCHHH----HHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHH
Q 000504 1286 SIIPQDPMLFQ-GTVRTNLDPL---EQHSDQE----IWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLAR 1357 (1458)
Q Consensus 1286 ~iIpQdp~LF~-gTIR~NLdp~---~~~sdee----I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1357 (1458)
++++.+.++. .|+++|+... ...++++ +.++++.+++.++... + ...||||||||++|||
T Consensus 89 -~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e~i~elLe~lgL~~~ld~-------~----~~~LSGGQrQRVaLAr 156 (549)
T PRK13545 89 -LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKEIIPEIIEFADIGKFIYQ-------P----VKTYSSGMKSRLGFAI 156 (549)
T ss_pred -eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHHHHHHHHHHcCChhHhhC-------C----cccCCHHHHHHHHHHH
Confidence 2333444443 4999998642 1233333 4467777877665433 2 3469999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000504 1358 VLLKKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYDSPRQLLED 1432 (1458)
Q Consensus 1358 ALLr~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g~p~~Ll~~ 1432 (1458)
||+.+|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 157 AL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~ 233 (549)
T PRK13545 157 SVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDH 233 (549)
T ss_pred HHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhh
Confidence 9999999999999999999999999999998753 47899999999999866 999999999999999999999864
No 458
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.8e-33 Score=314.57 Aligned_cols=194 Identities=23% Similarity=0.377 Sum_probs=156.3
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+... ...+.+++ |+++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 2 l~~~~v~~~~~~~~----~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 76 (218)
T cd03266 2 ITADALTKRFRDVK----KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFA-TVDGFDVVKEPAEA 76 (218)
T ss_pred eEEEEEEEecCCCC----ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceE-EECCEEcccCHHHH
Confidence 67899999996430 11268999 99999999999999999999999999999999999987 6665
Q ss_pred --EEEEEcCCCCCCC-CcHHHHHhcCCC---CCH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 660 --KKAYVPQSSWIQT-GTIRENILFGKD---MRQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 660 --~~ayv~Q~~~i~~-~Ti~enI~fg~~---~~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
.++|++|++.++. .|++||+.+... ... ++.++.++..++. ........+||||||||+
T Consensus 77 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv 145 (218)
T cd03266 77 RRRLGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGME-----------ELLDRRVGGFSTGMRQKV 145 (218)
T ss_pred HhhEEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-----------HHHhhhhhhcCHHHHHHH
Confidence 3799999998876 599999976432 111 2223334433332 223456779999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
+||||++.+|+++||||||++||+.+.+.+.+ .+..+. +++|+|++||+++++.. ||++++|++|++.+.|
T Consensus 146 ~laral~~~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 146 AIARALVHDPPVLLLDEPTTGLDVMATRALRE-FIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 99999999999999999999999999777765 455443 47999999999998865 9999999999998654
No 459
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-33 Score=318.81 Aligned_cols=200 Identities=28% Similarity=0.411 Sum_probs=160.9
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+.. .+.+++ |+++++|++++|+||||||||||+++|+|+.+|++|++ .++|
T Consensus 1 l~~~~l~~~~~~~-------~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 72 (242)
T cd03295 1 IEFENVTKRYGGG-------KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEI-FIDGEDIREQDPVE 72 (242)
T ss_pred CEEEEEEEEeCCc-------ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EECCeEcCcCChHH
Confidence 4678999999641 357899 99999999999999999999999999999999999986 6655
Q ss_pred ---EEEEEcCCCCCCC-CcHHHHHhcCCCC---CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHH
Q 000504 660 ---KKAYVPQSSWIQT-GTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQR 728 (1458)
Q Consensus 660 ---~~ayv~Q~~~i~~-~Ti~enI~fg~~~---~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 728 (1458)
.++|++|+|.++. .|++||+.++..+ +. ++.+++++..++.. .....+.+.+||||||||
T Consensus 73 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qr 143 (242)
T cd03295 73 LRRKIGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQR 143 (242)
T ss_pred hhcceEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHH
Confidence 3699999998875 6999999876322 21 12223333333321 012346678999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchh
Q 000504 729 IQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYED 805 (1458)
Q Consensus 729 v~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~ 805 (1458)
++||||++.+|++++|||||++||+.+...+.+ ++..+. .++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 144 v~laral~~~p~llllDEPt~~LD~~~~~~l~~-~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 222 (242)
T cd03295 144 VGVARALAADPPLLLMDEPFGALDPITRDQLQE-EFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDE 222 (242)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 999999999999999999999999998777765 454443 37999999999998764 99999999999999999887
Q ss_pred hhh
Q 000504 806 LIA 808 (1458)
Q Consensus 806 l~~ 808 (1458)
+.+
T Consensus 223 ~~~ 225 (242)
T cd03295 223 ILR 225 (242)
T ss_pred HHc
Confidence 754
No 460
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.3e-33 Score=289.65 Aligned_cols=192 Identities=29% Similarity=0.380 Sum_probs=163.1
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
|+++|++-.|+.. .+.|+| ||+|++||++.++||+|||||||||+|.++..|+.|++ .++|
T Consensus 2 I~f~~V~k~Y~~g-------~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i-~~~~~dl~~l~~~~ 73 (223)
T COG2884 2 IRFENVSKAYPGG-------REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKI-LVNGHDLSRLKGRE 73 (223)
T ss_pred eeehhhhhhcCCC-------chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceE-EECCeecccccccc
Confidence 6888999888753 678999 99999999999999999999999999999999999987 6665
Q ss_pred ------EEEEEcCCCCC-CCCcHHHHHhcCCCC---C----HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 ------KKAYVPQSSWI-QTGTIRENILFGKDM---R----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 ------~~ayv~Q~~~i-~~~Ti~enI~fg~~~---~----~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
+||+|+|+--+ ...||.||+.|.... . +++..++++..+|.+....+| ..|||||
T Consensus 74 iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGE 142 (223)
T COG2884 74 IPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGE 142 (223)
T ss_pred cchhhheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchH
Confidence 47999999765 677999999997532 2 244455667777777666665 4899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
||||+||||+..+|+++|-||||-+|||..+..|++-+..--..|.||+++|||.+.+.. --+++.+++|+++...
T Consensus 143 QQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 143 QQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999999999999999986433333469999999999999986 6789999999998654
No 461
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=320.62 Aligned_cols=202 Identities=24% Similarity=0.351 Sum_probs=164.4
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCcc-----CCCCcEEEECC----
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG---- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g---- 659 (1458)
.++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|+++ |++|++ .++|
T Consensus 4 ~l~~~~l~~~~~~--------~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v-~i~g~~~~ 74 (251)
T PRK14251 4 IISAKDVHLSYGN--------YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEI-KFEGQNIY 74 (251)
T ss_pred eEEEEeeEEEECC--------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEE-EECCEEcc
Confidence 5889999999963 368999 99999999999999999999999999999986 478986 5554
Q ss_pred -----------EEEEEcCCCCCCCCcHHHHHhcCCCC----CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++|++|++.++..|++||+.++... ++ ++.+++++.+++..+. ....+..+.+
T Consensus 75 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~ 147 (251)
T PRK14251 75 GSKMDLVELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQA 147 (251)
T ss_pred cccchHHHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhh
Confidence 37999999998889999999876421 11 2233344444442211 1123467789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
||||||||++||||++++|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++.. ||+|++|++|++.+
T Consensus 148 LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~ 226 (251)
T PRK14251 148 FSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEE-TLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIE 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHH-HHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999777765 55555567999999999999865 99999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+.+++..
T Consensus 227 ~~~~~~~~~ 235 (251)
T PRK14251 227 AGPTEEMFI 235 (251)
T ss_pred eCCHHHHHh
Confidence 999888764
No 462
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-33 Score=313.86 Aligned_cols=189 Identities=24% Similarity=0.381 Sum_probs=155.0
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|+++.|+. .+.+++ ||++++| +++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 1 i~~~~~~~~~~~--------~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 70 (211)
T cd03264 1 LQLENLTKRYGK--------KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTI-RIDGQDVLKQPQKL 70 (211)
T ss_pred CEEEEEEEEECC--------EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEE-EECCCccccchHHH
Confidence 468899999953 368999 9999999 999999999999999999999999999987 6665
Q ss_pred --EEEEEcCCCCCCC-CcHHHHHhcCCC---CC----HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHH
Q 000504 660 --KKAYVPQSSWIQT-GTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRI 729 (1458)
Q Consensus 660 --~~ayv~Q~~~i~~-~Ti~enI~fg~~---~~----~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 729 (1458)
.++|++|++.++. .|++||+.+... .+ +++.++.++.+++.+. ......+||||||||+
T Consensus 71 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 139 (211)
T cd03264 71 RRRIGYLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDR-----------AKKKIGSLSGGMRRRV 139 (211)
T ss_pred HhheEEecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHH-----------HhCchhhCCHHHHHHH
Confidence 3799999998876 499999987432 11 1223344444444322 1245578999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 730 QLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 730 ~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
+||||++++|+++||||||++||+.+.+.+.+ .+....+++|+|++||+++++.. ||++++|++|++++.|
T Consensus 140 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 140 GIAQALVGDPSILIVDEPTAGLDPEERIRFRN-LLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999887765 55555557999999999999865 9999999999998764
No 463
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=320.61 Aligned_cols=202 Identities=26% Similarity=0.377 Sum_probs=164.6
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCC---ccC--CCCcEEEECC----
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGE---IPR--ISGAAIKVHG---- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~---~~~--~~G~~i~~~g---- 659 (1458)
.++++|+++.|+. .+.+++ ||++++||+++|+|+||||||||+++|+|. .++ ++|++ .++|
T Consensus 3 ~l~~~~~~~~~~~--------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i-~~~g~~~~ 73 (250)
T PRK14245 3 KIDARDVNFWYGD--------FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEI-RIDGRNIY 73 (250)
T ss_pred EEEEEEEEEEECC--------EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEE-EECCEecc
Confidence 5889999999963 357899 999999999999999999999999999996 454 48976 5544
Q ss_pred -----------EEEEEcCCCCCCCCcHHHHHhcCCCC----CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++|++|++.++..|++||+.++... ++ ++.+++++.+++.++++ +..++.+.+
T Consensus 74 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 146 (250)
T PRK14245 74 DKGVQVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFA 146 (250)
T ss_pred cccccHHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCccc
Confidence 37999999988888999999876321 11 22334445454433222 224567789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
||||||||++||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|+|||+++++.. ||+|++|++|++++
T Consensus 147 LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~ 225 (250)
T PRK14245 147 LSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEE-LIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVE 225 (250)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999887765 55555568999999999999865 99999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+++++.+
T Consensus 226 ~~~~~~~~~ 234 (250)
T PRK14245 226 YDDTKKIFT 234 (250)
T ss_pred ECCHHHHhc
Confidence 999998865
No 464
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=320.36 Aligned_cols=202 Identities=23% Similarity=0.369 Sum_probs=163.4
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCc--cC---CCCcEEEECC----
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEI--PR---ISGAAIKVHG---- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~--~~---~~G~~i~~~g---- 659 (1458)
.++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|.. +| ++|++ .++|
T Consensus 5 ~l~~~~l~~~~~~--------~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i-~~~g~~~~ 75 (252)
T PRK14239 5 ILQVSDLSVYYNK--------KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSI-VYNGHNIY 75 (252)
T ss_pred eEEEEeeEEEECC--------eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceE-EECCEECc
Confidence 5889999999963 358899 9999999999999999999999999999985 35 48976 5554
Q ss_pred -----------EEEEEcCCCCCCCCcHHHHHhcCCCC----CHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++|++|++.+++.|++||+.++... +++ +.+++++.+++...+. +..+....+
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 148 (252)
T PRK14239 76 SPRTDTVDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALG 148 (252)
T ss_pred CcccchHhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCccc
Confidence 37999999999889999999875321 111 1222333333322221 234567789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
||||||||++||||+..+|+++||||||++||+.+...+++ .+..+.+++|+|++||+++.+.. ||+|++|++|++++
T Consensus 149 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 227 (252)
T PRK14239 149 LSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEE-TLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIE 227 (252)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHH-HHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999888765 55555557999999999998764 99999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+.+++.+
T Consensus 228 ~g~~~~~~~ 236 (252)
T PRK14239 228 YNDTKQMFM 236 (252)
T ss_pred eCCHHHHHh
Confidence 999988865
No 465
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.9e-33 Score=336.74 Aligned_cols=198 Identities=26% Similarity=0.455 Sum_probs=165.3
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+. .+.+++ ||++++||+++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 3 ~L~~~nls~~y~~--------~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I-~l~G~~i~~~~~~ 73 (402)
T PRK09536 3 MIDVSDLSVEFGD--------TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTV-LVAGDDVEALSAR 73 (402)
T ss_pred eEEEeeEEEEECC--------EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEE-EECCEEcCcCCHH
Confidence 4889999999963 368999 99999999999999999999999999999999999987 7766
Q ss_pred ----EEEEEcCCCCC-CCCcHHHHHhcCCC-----C---C---HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCCh
Q 000504 660 ----KKAYVPQSSWI-QTGTIRENILFGKD-----M---R---QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1458)
Q Consensus 660 ----~~ayv~Q~~~i-~~~Ti~enI~fg~~-----~---~---~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSG 723 (1458)
.++||+|++-+ ++.|++||+.+|+. + . .++.+++++..++.+ .......+|||
T Consensus 74 ~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~-----------~~~~~~~~LSg 142 (402)
T PRK09536 74 AASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQ-----------FADRPVTSLSG 142 (402)
T ss_pred HHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCch-----------hhcCChhhCCH
Confidence 37999999876 67899999998752 1 1 122333444444332 12345678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 724 GQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
|||||++|||||+++|+++||||||++||+.+...+.+ +++.+. .++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~-lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G 221 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLE-LVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAG 221 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEec
Confidence 99999999999999999999999999999999887765 455443 57899999999999865 9999999999999999
Q ss_pred cchhhhh
Q 000504 802 KYEDLIA 808 (1458)
Q Consensus 802 ~~~~l~~ 808 (1458)
++++++.
T Consensus 222 ~~~ev~~ 228 (402)
T PRK09536 222 PPADVLT 228 (402)
T ss_pred CHHHHhC
Confidence 9999875
No 466
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=321.46 Aligned_cols=203 Identities=23% Similarity=0.323 Sum_probs=163.9
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCcc-----CCCCcEEEECC---
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG--- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g--- 659 (1458)
..++++|.+++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|+.+ |++|++ .++|
T Consensus 20 ~~l~~~~l~~~~~~--------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i-~~~g~~i 90 (268)
T PRK14248 20 HILEVKDLSIYYGE--------KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEI-LYEGLNI 90 (268)
T ss_pred ceEEEEEEEEEeCC--------ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEE-EECCEEc
Confidence 46899999999963 358999 99999999999999999999999999999864 688986 5543
Q ss_pred ------------EEEEEcCCCCCCCCcHHHHHhcCCCCC----H----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCC
Q 000504 660 ------------KKAYVPQSSWIQTGTIRENILFGKDMR----Q----SFYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1458)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~enI~fg~~~~----~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~ 719 (1458)
.++|++|++.++..|++||+.++.... . ++..+.++.+++..++. ...+..+.
T Consensus 91 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~ 163 (268)
T PRK14248 91 LDSNINVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSAL 163 (268)
T ss_pred ccccccHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcc
Confidence 379999999988889999998763211 1 11222233333322111 23456788
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEE
Q 000504 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIE 798 (1458)
Q Consensus 720 ~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~ 798 (1458)
+||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++++.. ||+|++|++|+++
T Consensus 164 ~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~ 242 (268)
T PRK14248 164 SLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEE-LITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLV 242 (268)
T ss_pred cCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHH-HHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999877754 56655567899999999998865 9999999999999
Q ss_pred Ecccchhhhh
Q 000504 799 QSGKYEDLIA 808 (1458)
Q Consensus 799 ~~g~~~~l~~ 808 (1458)
+.|+.+++..
T Consensus 243 ~~~~~~~~~~ 252 (268)
T PRK14248 243 EYDQTEQIFT 252 (268)
T ss_pred EeCCHHHHHh
Confidence 9999888765
No 467
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=318.77 Aligned_cols=202 Identities=23% Similarity=0.337 Sum_probs=166.5
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC-----CCCcEEEECC----
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG---- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g---- 659 (1458)
-++++|+++.|+. .+.+++ |+++++||+++|+|+||||||||+++|+|..+| ++|++ .++|
T Consensus 4 ~l~~~~l~~~~~~--------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i-~~~g~~i~ 74 (251)
T PRK14270 4 KMESKNLNLWYGE--------KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEV-LLDGKNIY 74 (251)
T ss_pred EEEEEEeEEEECC--------eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEE-EECCEecc
Confidence 4789999999963 357999 999999999999999999999999999999875 78986 5544
Q ss_pred -----------EEEEEcCCCCCCCCcHHHHHhcCCCC----CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++|++|++.++..|++||+.|+... +. ++.+++++.+++..+++. ..+....+
T Consensus 75 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~ 147 (251)
T PRK14270 75 DKDVDVVELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALK 147 (251)
T ss_pred cccccHHHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCccc
Confidence 37999999998889999999986422 11 223345555555333221 23456789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
||||||||++||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 148 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~ 226 (251)
T PRK14270 148 LSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIED-LMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIE 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEE
Confidence 99999999999999999999999999999999999887765 56655557999999999999875 99999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+.+++..
T Consensus 227 ~~~~~~~~~ 235 (251)
T PRK14270 227 FNKTEKIFL 235 (251)
T ss_pred eCCHHHHhc
Confidence 999988865
No 468
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=320.79 Aligned_cols=204 Identities=23% Similarity=0.350 Sum_probs=165.4
Q ss_pred CccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCcc-----CCCCcEEEECC--
Q 000504 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG-- 659 (1458)
Q Consensus 588 ~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g-- 659 (1458)
+..++++|++++|+. .+.+++ ||+|++|++++|+|+||||||||+++|+|.++ |++|++ .++|
T Consensus 11 ~~~l~i~nl~~~~~~--------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v-~~~g~~ 81 (269)
T PRK14259 11 NIIISLQNVTISYGT--------FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRV-LFDGTD 81 (269)
T ss_pred CceEEEEeEEEEECC--------EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEE-EECCEE
Confidence 346999999999963 357899 99999999999999999999999999999987 588986 5554
Q ss_pred -------------EEEEEcCCCCCCCCcHHHHHhcCCCCC---H---HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 -------------KKAYVPQSSWIQTGTIRENILFGKDMR---Q---SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 -------------~~ayv~Q~~~i~~~Ti~enI~fg~~~~---~---~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++|++|++.++..|++||+.++.... . ++.+++++.+++...+ .+.......+
T Consensus 82 i~~~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~ 154 (269)
T PRK14259 82 LYDPRVDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDEC-------KDKLNESGYS 154 (269)
T ss_pred cccccCCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchh-------hhhhCCCccc
Confidence 379999999988789999999875321 1 2223333333332211 1234567789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeC-----
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKD----- 794 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~----- 794 (1458)
||||||||++||||++.+|+++||||||++||+.+..++.+ .+..+.+++|+|++||+++++.. ||++++|++
T Consensus 155 LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~ 233 (269)
T PRK14259 155 LSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEE-TMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEG 233 (269)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEecccccc
Confidence 99999999999999999999999999999999999887765 56655567899999999999865 999999996
Q ss_pred ------CeEEEcccchhhhh
Q 000504 795 ------GKIEQSGKYEDLIA 808 (1458)
Q Consensus 795 ------G~i~~~g~~~~l~~ 808 (1458)
|++++.|+.+++.+
T Consensus 234 ~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 234 GSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred ccccccceEEEeCCHHHHHh
Confidence 67899999988865
No 469
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-33 Score=320.20 Aligned_cols=203 Identities=24% Similarity=0.342 Sum_probs=164.4
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC-----CCCcEEEECC---
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG--- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g--- 659 (1458)
..++++|+++.|+. .+.+++ ||++++||+++|+|+||||||||+++|+|..+| ++|++ .++|
T Consensus 11 ~~l~~~~l~~~~~~--------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i-~~~g~~i 81 (258)
T PRK14268 11 PQIKVENLNLWYGE--------KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKV-SIEGEDI 81 (258)
T ss_pred eeEEEeeeEEEeCC--------eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEE-EECCEEc
Confidence 36899999999853 357999 999999999999999999999999999999875 78986 5543
Q ss_pred ------------EEEEEcCCCCCCCCcHHHHHhcCCC---CCHHH----HHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 ------------KKAYVPQSSWIQTGTIRENILFGKD---MRQSF----YEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~enI~fg~~---~~~~~----y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++|++|++.++..|++||+.|+.. .+... .+++++.+++..++ ....+....+
T Consensus 82 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~ 154 (258)
T PRK14268 82 YEPDVDVVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALS 154 (258)
T ss_pred ccccchHHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhh
Confidence 3799999999888999999998632 12221 22333333332211 1223567789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
||||||||++||||++.+|+++||||||++||+.+...+.+ +++.+.+++|+|++||+++++.. ||+|++|++|++++
T Consensus 155 LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 233 (258)
T PRK14268 155 LSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIED-LIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIE 233 (258)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHH-HHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999877765 55555567999999999999865 99999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+.+++.+
T Consensus 234 ~~~~~~~~~ 242 (258)
T PRK14268 234 FGQTRQIFH 242 (258)
T ss_pred eCCHHHHhc
Confidence 999988865
No 470
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3.5e-33 Score=321.75 Aligned_cols=199 Identities=25% Similarity=0.332 Sum_probs=162.2
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1458)
..++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 6 ~~l~~~~l~~~~~~--------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~i~~~~~ 76 (269)
T PRK11831 6 NLVDMRGVSFTRGN--------RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEI-LFDGENIPAMSR 76 (269)
T ss_pred ceEEEeCeEEEECC--------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEEccccCh
Confidence 35899999999853 357899 99999999999999999999999999999999999986 6654
Q ss_pred --------EEEEEcCCCCCCCC-cHHHHHhcCCC----CCHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCC
Q 000504 660 --------KKAYVPQSSWIQTG-TIRENILFGKD----MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1458)
Q Consensus 660 --------~~ayv~Q~~~i~~~-Ti~enI~fg~~----~~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LS 722 (1458)
.++|++|++.++.. |++||+.++.. .+.. +..+.++..++.. .......+||
T Consensus 77 ~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS 145 (269)
T PRK11831 77 SRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRG-----------AAKLMPSELS 145 (269)
T ss_pred hhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCC
Confidence 37999999988764 99999987521 1221 1222233333321 2234567899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
||||||++||||++.+|+++||||||++||+.+.+.+.+ ++..+. + ++|+|++||+++++.. ||+|++|++|++++
T Consensus 146 gGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~ 224 (269)
T PRK11831 146 GGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVK-LISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVA 224 (269)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEE
Confidence 999999999999999999999999999999999777765 455443 3 7899999999999875 99999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+.+++.+
T Consensus 225 ~g~~~~~~~ 233 (269)
T PRK11831 225 HGSAQALQA 233 (269)
T ss_pred eCCHHHHhc
Confidence 999998875
No 471
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.2e-33 Score=316.12 Aligned_cols=197 Identities=29% Similarity=0.414 Sum_probs=161.3
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 2 l~~~~l~~~~~~--------~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 72 (240)
T PRK09493 2 IEFKNVSKHFGP--------TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDL-IVDGLKVNDPKVDE 72 (240)
T ss_pred EEEEeEEEEECC--------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEECCcCChhH
Confidence 678999999853 357999 99999999999999999999999999999999999986 6655
Q ss_pred -----EEEEEcCCCCCC-CCcHHHHHhcCCC----CCHHH----HHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 -----KKAYVPQSSWIQ-TGTIRENILFGKD----MRQSF----YEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 -----~~ayv~Q~~~i~-~~Ti~enI~fg~~----~~~~~----y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
.++|++|++.++ ..|++||+.++.. .+... ..++++..+++ .....+..+|||||
T Consensus 73 ~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~ 141 (240)
T PRK09493 73 RLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLA-----------ERAHHYPSELSGGQ 141 (240)
T ss_pred HHHhhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------HHHhcChhhcCHHH
Confidence 379999998876 4699999988631 12211 22223322222 22345667999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccc
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKY 803 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~ 803 (1458)
|||++||||++.+|++++|||||++||+++...+.+ ++..+. +++|+|++||+++++.. ||+|++|++|++++.|++
T Consensus 142 ~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 220 (240)
T PRK09493 142 QQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLK-VMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDP 220 (240)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCH
Confidence 999999999999999999999999999999887766 555443 48999999999999875 999999999999999999
Q ss_pred hhhhh
Q 000504 804 EDLIA 808 (1458)
Q Consensus 804 ~~l~~ 808 (1458)
+++.+
T Consensus 221 ~~~~~ 225 (240)
T PRK09493 221 QVLIK 225 (240)
T ss_pred HHHhc
Confidence 88765
No 472
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-33 Score=311.76 Aligned_cols=190 Identities=26% Similarity=0.441 Sum_probs=154.1
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------E
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------K 660 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------~ 660 (1458)
++++|.+++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++| .
T Consensus 1 l~~~~l~~~~~~--------~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 71 (210)
T cd03269 1 LEVENVTKRFGR--------VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEV-LFDGKPLDIAARNR 71 (210)
T ss_pred CEEEEEEEEECC--------EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCCchhHHHHcc
Confidence 468899999853 357899 99999999999999999999999999999999999997 7776 4
Q ss_pred EEEEcCCCCCCC-CcHHHHHhcCCCC---CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHH
Q 000504 661 KAYVPQSSWIQT-GTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLA 732 (1458)
Q Consensus 661 ~ayv~Q~~~i~~-~Ti~enI~fg~~~---~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 732 (1458)
++|++|++.++. .|++||+.++... .. ++.++.++..++. ........+||||||||++||
T Consensus 72 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrl~la 140 (210)
T cd03269 72 IGYLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELS-----------EYANKRVEELSKGNQQKVQFI 140 (210)
T ss_pred EEEeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCCh-----------HHHhCcHhhCCHHHHHHHHHH
Confidence 799999988765 5999999875321 11 1222333333332 223456678999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 733 RAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 733 RAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
||++.+|+++||||||++||+.+...+.+. +..+ .+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 141 ~al~~~p~~lllDEP~~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 141 AAVIHDPELLILDEPFSGLDPVNVELLKDV-IRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999998877664 4444 357899999999999865 9999999999998654
No 473
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-33 Score=324.38 Aligned_cols=201 Identities=26% Similarity=0.386 Sum_probs=165.8
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCC---CcEEEECC-----
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRIS---GAAIKVHG----- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~---G~~i~~~g----- 659 (1458)
..++++|++++|+.. ..+.+++ ||++++||+++|+|+||||||||+++|+|+++|++ |++ .++|
T Consensus 4 ~~l~i~~l~~~~~~~------~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i-~i~g~~~~~ 76 (282)
T PRK13640 4 NIVEFKHVSFTYPDS------KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKI-TVDGITLTA 76 (282)
T ss_pred ceEEEEEEEEEcCCC------CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEE-EECCEECCc
Confidence 468999999999642 2458999 99999999999999999999999999999999987 775 6655
Q ss_pred --------EEEEEcCCCC--CCCCcHHHHHhcCCCC---CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCC
Q 000504 660 --------KKAYVPQSSW--IQTGTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1458)
Q Consensus 660 --------~~ayv~Q~~~--i~~~Ti~enI~fg~~~---~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LS 722 (1458)
.++|++|+|+ +++.|++|||.|+... +. ++.+++++.+++.. ..+....+||
T Consensus 77 ~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----------~~~~~~~~LS 145 (282)
T PRK13640 77 KTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLD-----------YIDSEPANLS 145 (282)
T ss_pred CCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChh-----------HhcCCcccCC
Confidence 3699999984 5678999999987432 22 22334445555432 2345567999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhccCCEEEEEeCCeEEEc
Q 000504 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDAADLVLVMKDGKIEQS 800 (1458)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~ 800 (1458)
||||||++||||++++|+++||||||++||+.+...+.+ ++..+. + ++|||++||+++++..||++++|++|++++.
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~ 224 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILK-LIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQ 224 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999888776 454443 3 7899999999999878999999999999999
Q ss_pred ccchhhhh
Q 000504 801 GKYEDLIA 808 (1458)
Q Consensus 801 g~~~~l~~ 808 (1458)
|+.+++..
T Consensus 225 g~~~~~~~ 232 (282)
T PRK13640 225 GSPVEIFS 232 (282)
T ss_pred CCHHHHhc
Confidence 99888765
No 474
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-33 Score=309.06 Aligned_cols=192 Identities=31% Similarity=0.444 Sum_probs=160.5
Q ss_pred cccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC-----------------EEEEEcCCCC-CCCC
Q 000504 613 KLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-----------------KKAYVPQSSW-IQTG 673 (1458)
Q Consensus 613 ~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-----------------~~ayv~Q~~~-i~~~ 673 (1458)
-++| ||+|+.||+..|.|-+|||||||++++.++++|++|++ .++| ++++|+|+-- ++..
T Consensus 43 Gv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G~i-lv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhr 121 (386)
T COG4175 43 GVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRGEI-LVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHR 121 (386)
T ss_pred eeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCceE-EECCcchhcCCHHHHHHHHhhhhhhhhhhhccccch
Confidence 4677 99999999999999999999999999999999999997 7877 3699999955 4678
Q ss_pred cHHHHHhcCCCCC----HHHHHHH---HHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeC
Q 000504 674 TIRENILFGKDMR----QSFYEEV---LEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDD 746 (1458)
Q Consensus 674 Ti~enI~fg~~~~----~~~y~~v---l~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDe 746 (1458)
||.||+.||.+.. +++.+++ ++..+|+..- .....+||||+||||.|||||..||||+|+||
T Consensus 122 tVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~-----------~~yp~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 122 TVLENVAFGLEVQGVPKAEREERALEALELVGLEGYA-----------DKYPNELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred hHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhh-----------hcCcccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999998652 3444443 4444544332 24567899999999999999999999999999
Q ss_pred CCCCCChhhHHHHHHHHHHHHhC-CcEEEEEecccchh-ccCCEEEEEeCCeEEEcccchhhhhhcchHHHH
Q 000504 747 PFSAVDAHTGTHLFKQCLMGLLS-QKTVLYTTHQLEFL-DAADLVLVMKDGKIEQSGKYEDLIADQNSELVR 816 (1458)
Q Consensus 747 p~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l-~~~D~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 816 (1458)
|||||||-.+.++-++++....+ +||+|+||||+++. +-.|||.+|+||+|++.|+++|+..++..++..
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~ 262 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGEIVQVGTPEEILLNPANDYVR 262 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCeEEEeCCHHHHHcCccHHHHH
Confidence 99999999988887776643322 79999999999985 569999999999999999999999866655544
No 475
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-33 Score=324.72 Aligned_cols=204 Identities=26% Similarity=0.400 Sum_probs=162.7
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+.... ...+.+++ ||++++|++++|+||||||||||+++|+|.++|++|++ .++|
T Consensus 2 ~l~~~~l~~~~~~~~~---~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i-~~~g~~i~~~~~~ 77 (280)
T PRK13649 2 GINLQNVSYTYQAGTP---FEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSV-RVDDTLITSTSKN 77 (280)
T ss_pred eEEEEEEEEEcCCCCc---cccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE-EECCEEccccccc
Confidence 3789999999974300 01368999 99999999999999999999999999999999999986 6655
Q ss_pred --------EEEEEcCCC--CCCCCcHHHHHhcCCC---CCHHH----HHHHHHHhhhhhhHHhhcCCCcccccCCCCCCC
Q 000504 660 --------KKAYVPQSS--WIQTGTIRENILFGKD---MRQSF----YEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1458)
Q Consensus 660 --------~~ayv~Q~~--~i~~~Ti~enI~fg~~---~~~~~----y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LS 722 (1458)
.++|++|++ .+++.|++||+.++.. .+.+. .+++++..++.. .....+..+||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS 147 (280)
T PRK13649 78 KDIKQIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISE----------SLFEKNPFELS 147 (280)
T ss_pred cCHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCC
Confidence 269999997 5677899999987632 22221 122233333321 12345678999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCeEEEc
Q 000504 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQS 800 (1458)
Q Consensus 723 GGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~ 800 (1458)
||||||++||||++.+|+++||||||++||+.+.+.+.+ .+..+. .++|||++||+++++.. ||++++|++|++++.
T Consensus 148 gG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 226 (280)
T PRK13649 148 GGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMT-LFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLS 226 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999877765 454443 47999999999999865 999999999999999
Q ss_pred ccchhhhh
Q 000504 801 GKYEDLIA 808 (1458)
Q Consensus 801 g~~~~l~~ 808 (1458)
|+.+++..
T Consensus 227 g~~~~~~~ 234 (280)
T PRK13649 227 GKPKDIFQ 234 (280)
T ss_pred CCHHHHhc
Confidence 99888754
No 476
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=317.61 Aligned_cols=202 Identities=25% Similarity=0.367 Sum_probs=163.7
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCC-----CCcEEEECC----
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRI-----SGAAIKVHG---- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~-----~G~~i~~~g---- 659 (1458)
.++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|. +|++ .++|
T Consensus 4 ~l~~~~l~~~~~~--------~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v-~~~g~~~~ 74 (251)
T PRK14249 4 KIKIRGVNFFYHK--------HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAV-LLDNENIY 74 (251)
T ss_pred eEEEEEEEEEECC--------eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEE-EECCEEcc
Confidence 5889999999963 358999 9999999999999999999999999999999987 5875 4433
Q ss_pred -----------EEEEEcCCCCCCCCcHHHHHhcCCCC----CHHH----HHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQSF----YEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~~~~----y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++|++|++.++..|++||+.++..+ .+++ .+++++..++.+.++ +..+..+.+
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~ 147 (251)
T PRK14249 75 SPNLDVVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLA 147 (251)
T ss_pred ccccChHHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCccc
Confidence 48999999998888999999986432 1111 122222222221111 234577889
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++.+
T Consensus 148 LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~ 226 (251)
T PRK14249 148 LSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEE-LMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVE 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEE
Confidence 99999999999999999999999999999999999877755 56555567999999999999876 89999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+.+++..
T Consensus 227 ~~~~~~~~~ 235 (251)
T PRK14249 227 YGRTGEIFS 235 (251)
T ss_pred eCCHHHHHh
Confidence 999888765
No 477
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-33 Score=320.40 Aligned_cols=204 Identities=25% Similarity=0.357 Sum_probs=168.0
Q ss_pred CccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCcc-----CCCCcEEEECC--
Q 000504 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG-- 659 (1458)
Q Consensus 588 ~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g-- 659 (1458)
...++++|++++|+. .+.++| ||++++||+++|+|+||||||||+++|+|+++ |++|++ .++|
T Consensus 18 ~~~l~~~nl~~~~~~--------~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i-~~~g~~ 88 (267)
T PRK14237 18 EIALSTKDLHVYYGK--------KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQI-LYRGID 88 (267)
T ss_pred CeEEEEeeEEEEECC--------eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEE-EECCEE
Confidence 346999999999953 368999 99999999999999999999999999999986 478986 5554
Q ss_pred -------------EEEEEcCCCCCCCCcHHHHHhcCCCC----CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCC
Q 000504 660 -------------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1458)
Q Consensus 660 -------------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g 718 (1458)
.++|++|++.++..|++||+.++... ++ ++..++++.+++..++. +..+..+
T Consensus 89 ~~~~~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~ 161 (267)
T PRK14237 89 INRKEINVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSA 161 (267)
T ss_pred cccccCChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCc
Confidence 37999999998888999999986321 11 22334455555543332 2345678
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhc-cCCEEEEEeCCeE
Q 000504 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLD-AADLVLVMKDGKI 797 (1458)
Q Consensus 719 ~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i 797 (1458)
.+||||||||++||||++++|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++++. .||+|++|++|++
T Consensus 162 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i 240 (267)
T PRK14237 162 LTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEE-TMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDL 240 (267)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 8999999999999999999999999999999999998777765 5555556799999999999986 4999999999999
Q ss_pred EEcccchhhhh
Q 000504 798 EQSGKYEDLIA 808 (1458)
Q Consensus 798 ~~~g~~~~l~~ 808 (1458)
++.|+.+++..
T Consensus 241 ~~~g~~~~~~~ 251 (267)
T PRK14237 241 IEYDKTRNIFT 251 (267)
T ss_pred EEeCCHHHHhc
Confidence 99999988865
No 478
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-33 Score=317.23 Aligned_cols=202 Identities=24% Similarity=0.325 Sum_probs=162.9
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC-----CCCcEEEECC----
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG---- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g---- 659 (1458)
.++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|+++| ++|++ .++|
T Consensus 3 ~l~~~~l~~~~~~--------~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i-~~~g~~i~ 73 (250)
T PRK14247 3 KIEIRDLKVSFGQ--------VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEV-YLDGQDIF 73 (250)
T ss_pred eEEEEeeEEEECC--------eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEE-EECCEECC
Confidence 4789999999863 357899 999999999999999999999999999999974 68986 6665
Q ss_pred ---------EEEEEcCCCCC-CCCcHHHHHhcCCCC-----CHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 ---------KKAYVPQSSWI-QTGTIRENILFGKDM-----RQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 ---------~~ayv~Q~~~i-~~~Ti~enI~fg~~~-----~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++|++|++-+ ++.|++||+.++... ... +.++.++.+++.+.+. ........+
T Consensus 74 ~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 146 (250)
T PRK14247 74 KMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGK 146 (250)
T ss_pred cCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCccc
Confidence 37999999875 567999999876421 111 2223334444322111 123456789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhc-cCCEEEEEeCCeEEE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQ 799 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~ 799 (1458)
||||||||++||||+.++|++++|||||++||+.+...+.+ ++..+.+++|+|++||+++++. .||+|++|++|++.+
T Consensus 147 LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 225 (250)
T PRK14247 147 LSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIES-LFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVE 225 (250)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEE
Confidence 99999999999999999999999999999999999887765 4555556899999999999986 599999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+.+++.+
T Consensus 226 ~g~~~~~~~ 234 (250)
T PRK14247 226 WGPTREVFT 234 (250)
T ss_pred ECCHHHHHc
Confidence 999988865
No 479
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.2e-33 Score=330.04 Aligned_cols=200 Identities=30% Similarity=0.430 Sum_probs=164.1
Q ss_pred CccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC-------
Q 000504 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------- 659 (1458)
Q Consensus 588 ~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------- 659 (1458)
...|+++|++++|+. ...|++ ||+|++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 39 ~~~i~i~nl~k~y~~--------~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i-~i~G~~~~~~~ 109 (340)
T PRK13536 39 TVAIDLAGVSKSYGD--------KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKI-TVLGVPVPARA 109 (340)
T ss_pred ceeEEEEEEEEEECC--------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEE-EECCEECCcch
Confidence 356999999999963 358999 99999999999999999999999999999999999987 7766
Q ss_pred -----EEEEEcCCCCCC-CCcHHHHHhcCCC---CCHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHH
Q 000504 660 -----KKAYVPQSSWIQ-TGTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQK 726 (1458)
Q Consensus 660 -----~~ayv~Q~~~i~-~~Ti~enI~fg~~---~~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 726 (1458)
.+||+||++.++ ..|++||+.+... .+.. +.+++++.++|.+ ....+..+||||||
T Consensus 110 ~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~-----------~~~~~~~~LS~G~k 178 (340)
T PRK13536 110 RLARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-----------KADARVSDLSGGMK 178 (340)
T ss_pred HHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhCCChhhCCHHHH
Confidence 379999999875 5799999985321 1211 1222333333221 12355678999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccch
Q 000504 727 QRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYE 804 (1458)
Q Consensus 727 qRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~ 804 (1458)
||++||||+.++|+++||||||++||+.+...+++ .+..+ .+|+|||++||+++.+.. ||+|++|++|+++..|+.+
T Consensus 179 qrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~-~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~ 257 (340)
T PRK13536 179 RRLTLARALINDPQLLILDEPTTGLDPHARHLIWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPH 257 (340)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHH
Confidence 99999999999999999999999999999888776 45444 358999999999999875 9999999999999999998
Q ss_pred hhhh
Q 000504 805 DLIA 808 (1458)
Q Consensus 805 ~l~~ 808 (1458)
++..
T Consensus 258 ~l~~ 261 (340)
T PRK13536 258 ALID 261 (340)
T ss_pred HHHh
Confidence 8865
No 480
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2.5e-33 Score=314.07 Aligned_cols=193 Identities=27% Similarity=0.341 Sum_probs=157.1
Q ss_pred EEEEeeeEEeCCCCCcceeeeeEEeeCCcEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCHHHHhcceEE
Q 000504 1208 IELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSI 1287 (1458)
Q Consensus 1208 I~~~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~i~i 1287 (1458)
+.++|++.+|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... .....
T Consensus 23 l~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~-----~~~~~- 94 (224)
T cd03220 23 LGILGRKGEVGE--FWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSLL-----GLGGG- 94 (224)
T ss_pred hhhhhhhhhcCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchhh-----ccccc-
Confidence 778888888865 4699999999999999999999999999999999999999999999999986421 11111
Q ss_pred EccCCCCccccHHHhcCcC---CCCCH----HHHHHHHHHcCcHHHHHhcccccCccccCCCCCCChhHHHHHHHHHHhc
Q 000504 1288 IPQDPMLFQGTVRTNLDPL---EQHSD----QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLL 1360 (1458)
Q Consensus 1288 IpQdp~LF~gTIR~NLdp~---~~~sd----eeI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1360 (1458)
+..+.|+++|+... ...+. +++.++++..++.+. ++..+ ..||+|||||++||||++
T Consensus 95 -----~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LSgG~~qrv~laral~ 158 (224)
T cd03220 95 -----FNPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDF-------IDLPV----KTYSSGMKARLAFAIATA 158 (224)
T ss_pred -----CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-------hhCCh----hhCCHHHHHHHHHHHHHh
Confidence 22356999998532 11222 235556666665433 34444 469999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000504 1361 KKKRILVLDEATASIDTATDNVIQQTIREET-SRCTVITVAHRIPTVID-NDLVLVLDEGKVLEYD 1424 (1458)
Q Consensus 1361 r~~~ILlLDEaTsslD~~Td~~Iq~~I~~~~-~~~TVI~IAHrl~ti~~-~DrVlvL~~G~ivE~g 1424 (1458)
++|++|||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|
T Consensus 159 ~~p~llllDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 159 LEPDILLIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999998764 35899999999999865 9999999999998765
No 481
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.5e-33 Score=318.98 Aligned_cols=200 Identities=26% Similarity=0.384 Sum_probs=162.9
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1458)
..++++|+++.|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 4 ~~l~~~~l~~~~~~--------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~~~ 74 (257)
T PRK10619 4 NKLNVIDLHKRYGE--------HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSI-VVNGQTINLVRD 74 (257)
T ss_pred ccEEEeeeEEEECC--------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEE-EECCEEcccccc
Confidence 46899999999963 358899 99999999999999999999999999999999999986 5554
Q ss_pred ------------------EEEEEcCCCCCCC-CcHHHHHhcCC----CCCH----HHHHHHHHHhhhhhhHHhhcCCCcc
Q 000504 660 ------------------KKAYVPQSSWIQT-GTIRENILFGK----DMRQ----SFYEEVLEGCALNQDIEMWADGDLS 712 (1458)
Q Consensus 660 ------------------~~ayv~Q~~~i~~-~Ti~enI~fg~----~~~~----~~y~~vl~~c~l~~dl~~l~~gd~t 712 (1458)
.++|++|++.++. .|++||+.++. ..+. ++..+.++..++...+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------- 145 (257)
T PRK10619 75 KDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA--------- 145 (257)
T ss_pred cccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh---------
Confidence 3799999998876 59999998742 1121 1122222322221111
Q ss_pred cccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEE
Q 000504 713 VVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVL 790 (1458)
Q Consensus 713 ~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~ 790 (1458)
.+....+||||||||++||||++++|+++||||||++||+.+.+.+.+ ++..+. .++|+|+|||+++++.. ||+|+
T Consensus 146 -~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivsH~~~~~~~~~d~i~ 223 (257)
T PRK10619 146 -QGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLR-IMQQLAEEGKTMVVVTHEMGFARHVSSHVI 223 (257)
T ss_pred -hhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEE
Confidence 145678999999999999999999999999999999999999888765 455543 48999999999999986 99999
Q ss_pred EEeCCeEEEcccchhhhh
Q 000504 791 VMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 791 ~l~~G~i~~~g~~~~l~~ 808 (1458)
+|++|++++.|+++++..
T Consensus 224 ~l~~G~i~~~~~~~~~~~ 241 (257)
T PRK10619 224 FLHQGKIEEEGAPEQLFG 241 (257)
T ss_pred EEECCEEEEeCCHHHhhh
Confidence 999999999999888764
No 482
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-33 Score=310.07 Aligned_cols=188 Identities=27% Similarity=0.402 Sum_probs=153.2
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE---------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--------- 660 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--------- 660 (1458)
|+++|++++|+.. . .+ ||++++||+++|+||||||||||+++|+|+++|++|++ .++|.
T Consensus 1 i~~~~l~~~~~~~--------~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i-~~~g~~~~~~~~~~ 69 (211)
T cd03298 1 VRLDKIRFSYGEQ--------P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRV-LINGVDVTAAPPAD 69 (211)
T ss_pred CEEEeEEEEeCCE--------e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEEcCcCCHhH
Confidence 4688999998632 1 27 99999999999999999999999999999999999987 77663
Q ss_pred --EEEEcCCCCCCC-CcHHHHHhcCCCC-------CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHH
Q 000504 661 --KAYVPQSSWIQT-GTIRENILFGKDM-------RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1458)
Q Consensus 661 --~ayv~Q~~~i~~-~Ti~enI~fg~~~-------~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 730 (1458)
++|++|++.++. .|++||+.++... ++++.+++++.+++.+. ......+||||||||++
T Consensus 70 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~ 138 (211)
T cd03298 70 RPVSMLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGL-----------EKRLPGELSGGERQRVA 138 (211)
T ss_pred ccEEEEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHH-----------HhCCcccCCHHHHHHHH
Confidence 799999998876 5999999876431 12233444554444322 23455689999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcc
Q 000504 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSG 801 (1458)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 801 (1458)
||||++.+|+++||||||++||+++...+.+ .+..+. .++|+|++||+++++.. ||+|++|++|++++.|
T Consensus 139 ia~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 139 LARVLVRDKPVLLLDEPFAALDPALRAEMLD-LVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999887765 455443 37899999999999876 9999999999998654
No 483
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.8e-33 Score=316.88 Aligned_cols=198 Identities=22% Similarity=0.324 Sum_probs=162.5
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|+++.|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 2 ~i~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i-~~~g~~~~~~~~~ 72 (242)
T TIGR03411 2 ILYLEGLSVSFDG--------FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSV-LFGGTDLTGLPEH 72 (242)
T ss_pred eEEEEeeEEEcCC--------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeE-EECCeecCCCCHH
Confidence 3789999999963 357899 99999999999999999999999999999999999986 6655
Q ss_pred -----EEEEEcCCCCCCCC-cHHHHHhcCCCCC---------------HHHHHHHHHHhhhhhhHHhhcCCCcccccCCC
Q 000504 660 -----KKAYVPQSSWIQTG-TIRENILFGKDMR---------------QSFYEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1458)
Q Consensus 660 -----~~ayv~Q~~~i~~~-Ti~enI~fg~~~~---------------~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g 718 (1458)
.++|++|++.++.+ |++||+.++...+ +++.++.++..++ ........
T Consensus 73 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~ 141 (242)
T TIGR03411 73 QIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGL-----------ADEADRLA 141 (242)
T ss_pred HHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCC-----------chhhcCCh
Confidence 27999999988765 9999998864311 1111222222222 22345677
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeE
Q 000504 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1458)
Q Consensus 719 ~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i 797 (1458)
.+||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||++++++. ||+|++|++|++
T Consensus 142 ~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~ 220 (242)
T TIGR03411 142 GLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAE-LLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSV 220 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeE
Confidence 8999999999999999999999999999999999999877765 56655567999999999999875 999999999999
Q ss_pred EEcccchhhhh
Q 000504 798 EQSGKYEDLIA 808 (1458)
Q Consensus 798 ~~~g~~~~l~~ 808 (1458)
++.|+++++..
T Consensus 221 ~~~~~~~~~~~ 231 (242)
T TIGR03411 221 LAEGSLDQVQA 231 (242)
T ss_pred EeeCCHHHHhc
Confidence 99999888754
No 484
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.6e-33 Score=312.71 Aligned_cols=191 Identities=30% Similarity=0.377 Sum_probs=153.7
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+... ...+.+++ ||++++|++++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 2 l~~~~v~~~~~~~~----~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i-~~~g~~~~~~~~~~ 76 (221)
T TIGR02211 2 LKCENLGKRYQEGK----LDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEV-LFNGQSLSKLSSNE 76 (221)
T ss_pred EEEEeeeEEccCCC----cceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEEhhhcCHhH
Confidence 67899999996420 12468899 99999999999999999999999999999999999986 6654
Q ss_pred -------EEEEEcCCCCCCC-CcHHHHHhcCCC---CCHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChH
Q 000504 660 -------KKAYVPQSSWIQT-GTIRENILFGKD---MRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1458)
Q Consensus 660 -------~~ayv~Q~~~i~~-~Ti~enI~fg~~---~~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGG 724 (1458)
.++|++|++.++. .|++||+.++.. ++.. +..+.++.+++. ........+||||
T Consensus 77 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G 145 (221)
T TIGR02211 77 RAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLE-----------HRINHRPSELSGG 145 (221)
T ss_pred HHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhhCChhhCCHH
Confidence 3799999988774 699999987432 2211 222333333332 2234566789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhccCCEEEEEeCCeEE
Q 000504 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDAADLVLVMKDGKIE 798 (1458)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~D~i~~l~~G~i~ 798 (1458)
||||++||||++.+|+++||||||++||+++...+.+ ++..+. .++|+|++||+++++..+|+|++|++|+++
T Consensus 146 ~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 146 ERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFD-LMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999887765 455443 378999999999998889999999999975
No 485
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=4.4e-33 Score=317.94 Aligned_cols=198 Identities=28% Similarity=0.396 Sum_probs=161.1
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC---------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--------- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--------- 659 (1458)
.++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+.+|++|++ .++|
T Consensus 3 ~l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~ 73 (250)
T PRK11264 3 AIEVKNLVKKFHG--------QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTI-RVGDITIDTARSL 73 (250)
T ss_pred cEEEeceEEEECC--------eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEE-EECCEEccccccc
Confidence 3789999999963 358899 99999999999999999999999999999999999986 5443
Q ss_pred ------------EEEEEcCCCCCCC-CcHHHHHhcCC----CCCHH----HHHHHHHHhhhhhhHHhhcCCCcccccCCC
Q 000504 660 ------------KKAYVPQSSWIQT-GTIRENILFGK----DMRQS----FYEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1458)
Q Consensus 660 ------------~~ayv~Q~~~i~~-~Ti~enI~fg~----~~~~~----~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g 718 (1458)
.++|++|++.++. .|++||+.++. ..+.+ +.++.++..++. ...+...
T Consensus 74 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~ 142 (250)
T PRK11264 74 SQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLA-----------GKETSYP 142 (250)
T ss_pred cchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-----------chhhCCh
Confidence 3799999998764 69999998752 11111 122223322222 1234567
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCe
Q 000504 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGK 796 (1458)
Q Consensus 719 ~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~ 796 (1458)
.+||||||||++||||+..+|+++||||||++||+.+...+.+ ++..+. +++|+|++||+++++.. ||+|++|++|+
T Consensus 143 ~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 221 (250)
T PRK11264 143 RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLN-TIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGR 221 (250)
T ss_pred hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 8999999999999999999999999999999999999887765 455443 48999999999999875 99999999999
Q ss_pred EEEcccchhhhh
Q 000504 797 IEQSGKYEDLIA 808 (1458)
Q Consensus 797 i~~~g~~~~l~~ 808 (1458)
+++.|+.+++.+
T Consensus 222 i~~~~~~~~~~~ 233 (250)
T PRK11264 222 IVEQGPAKALFA 233 (250)
T ss_pred EEEeCCHHHHhc
Confidence 999999888765
No 486
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-33 Score=324.90 Aligned_cols=205 Identities=25% Similarity=0.364 Sum_probs=161.8
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1458)
..++++|++++|+.... ...+.+++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 5 ~~l~i~nl~~~~~~~~~---~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i-~~~g~~i~~~~~ 80 (289)
T PRK13645 5 KDIILDNVSYTYAKKTP---FEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQT-IVGDYAIPANLK 80 (289)
T ss_pred ceEEEEEEEEEeCCCCc---cccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EECCEEcccccc
Confidence 35899999999964300 01358999 99999999999999999999999999999999999986 5544
Q ss_pred ----------EEEEEcCCCC--CCCCcHHHHHhcCCCC---CHHH-HH---HHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 ----------KKAYVPQSSW--IQTGTIRENILFGKDM---RQSF-YE---EVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 ----------~~ayv~Q~~~--i~~~Ti~enI~fg~~~---~~~~-y~---~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++|++|+|. ++..|++||+.|+... ..+. .+ ++++..++. . ...+....+
T Consensus 81 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~-------~---~~~~~~~~~ 150 (289)
T PRK13645 81 KIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLP-------E---DYVKRSPFE 150 (289)
T ss_pred ccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCC-------h---hHhcCChhh
Confidence 3799999984 5667999999986431 1111 11 222222221 1 123466789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i 797 (1458)
||||||||++||||++.+|+++||||||++||+.+.+.+.+ ++..+. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 151 LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i 229 (289)
T PRK13645 151 LSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFIN-LFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKV 229 (289)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999877765 455443 37999999999998764 999999999999
Q ss_pred EEcccchhhhh
Q 000504 798 EQSGKYEDLIA 808 (1458)
Q Consensus 798 ~~~g~~~~l~~ 808 (1458)
++.|+.+++..
T Consensus 230 ~~~g~~~~~~~ 240 (289)
T PRK13645 230 ISIGSPFEIFS 240 (289)
T ss_pred EEeCCHHHHhc
Confidence 99999888754
No 487
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-33 Score=316.67 Aligned_cols=202 Identities=24% Similarity=0.373 Sum_probs=163.5
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC-----CCCcEEEECC----
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG---- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g---- 659 (1458)
.++++|++++|+. .+.++| ||++++||+++|+|+||||||||+++|+|..++ ++|++ .++|
T Consensus 3 ~l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i-~~~g~~~~ 73 (250)
T PRK14240 3 KISVKDLDLFYGD--------FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEV-LLDGQDIY 73 (250)
T ss_pred eEEEEEEEEEECC--------ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEE-EECCEEcc
Confidence 4789999999963 357899 999999999999999999999999999998753 68986 5554
Q ss_pred -----------EEEEEcCCCCCCCCcHHHHHhcCCCC----CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCC
Q 000504 660 -----------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGIN 720 (1458)
Q Consensus 660 -----------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~ 720 (1458)
.++|++|++.++..|++||+.++... .. ++.++.++.+++..++. ...+..+.+
T Consensus 74 ~~~~~~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~ 146 (250)
T PRK14240 74 KSDIDVNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALG 146 (250)
T ss_pred ccccchHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCC
Confidence 37999999988789999999986421 11 12222333333332221 234567789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeEEE
Q 000504 721 LSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQ 799 (1458)
Q Consensus 721 LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 799 (1458)
||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~ 225 (250)
T PRK14240 147 LSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEE-LIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVE 225 (250)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999877754 56665568999999999998865 99999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+.+++..
T Consensus 226 ~~~~~~~~~ 234 (250)
T PRK14240 226 FGDTVDLFT 234 (250)
T ss_pred eCCHHHHHh
Confidence 999888764
No 488
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-33 Score=318.43 Aligned_cols=203 Identities=24% Similarity=0.375 Sum_probs=166.2
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCcc-----CCCCcEEEECC---
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIP-----RISGAAIKVHG--- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~~i~~~g--- 659 (1458)
..++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|..+ |++|++ .++|
T Consensus 9 ~~l~i~~v~~~~~~--------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i-~~~g~~i 79 (264)
T PRK14243 9 TVLRTENLNVYYGS--------FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKV-TFHGKNL 79 (264)
T ss_pred eEEEEeeeEEEECC--------EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEE-EECCEEc
Confidence 36899999999963 367999 99999999999999999999999999999875 378976 5544
Q ss_pred ------------EEEEEcCCCCCCCCcHHHHHhcCCCCC------HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCC
Q 000504 660 ------------KKAYVPQSSWIQTGTIRENILFGKDMR------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINL 721 (1458)
Q Consensus 660 ------------~~ayv~Q~~~i~~~Ti~enI~fg~~~~------~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~L 721 (1458)
.++|++|++.+++.|++||+.++.... +++.+++++.+++..++.. ..+..+.+|
T Consensus 80 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~L 152 (264)
T PRK14243 80 YAPDVDPVEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSL 152 (264)
T ss_pred cccccChHHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccC
Confidence 379999999988789999999864321 1223334444444433321 235677899
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEe-------
Q 000504 722 SGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMK------- 793 (1458)
Q Consensus 722 SGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~------- 793 (1458)
|||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++++.. ||+|++|+
T Consensus 153 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~ 231 (264)
T PRK14243 153 SGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEE-LMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGG 231 (264)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeccccccc
Confidence 9999999999999999999999999999999999887755 56666567899999999999875 99999998
Q ss_pred --CCeEEEcccchhhhh
Q 000504 794 --DGKIEQSGKYEDLIA 808 (1458)
Q Consensus 794 --~G~i~~~g~~~~l~~ 808 (1458)
+|++++.|+.+++..
T Consensus 232 ~~~g~i~~~~~~~~~~~ 248 (264)
T PRK14243 232 GRYGYLVEFDRTEKIFN 248 (264)
T ss_pred ccCceEEEeCCHHHHHh
Confidence 899999999999865
No 489
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.2e-33 Score=314.07 Aligned_cols=197 Identities=27% Similarity=0.446 Sum_probs=160.2
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|+++.|+. .+.+++ ||++++||+++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~--------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 71 (230)
T TIGR03410 1 LEVSNLNVYYGQ--------SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSI-RLDGEDITKLPPHE 71 (230)
T ss_pred CEEEeEEEEeCC--------eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEE-EECCEECCCCCHHH
Confidence 468899999863 368899 99999999999999999999999999999999999987 6654
Q ss_pred ----EEEEEcCCCCCCCC-cHHHHHhcCCCCC----HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHH
Q 000504 660 ----KKAYVPQSSWIQTG-TIRENILFGKDMR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQ 730 (1458)
Q Consensus 660 ----~~ayv~Q~~~i~~~-Ti~enI~fg~~~~----~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 730 (1458)
.++|++|++.++.. |++||+.++.... .+.++++++... +.....+....+||||||||++
T Consensus 72 ~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~ 141 (230)
T TIGR03410 72 RARAGIAYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLA 141 (230)
T ss_pred HHHhCeEEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHH
Confidence 37999999987764 9999998764321 112233332222 1111234667799999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhcc-CCEEEEEeCCeEEEcccchhhh
Q 000504 731 LARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGKYEDLI 807 (1458)
Q Consensus 731 LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~ 807 (1458)
||||++.+|+++||||||++||+.+...+.+ .+..+. .++|+|++||+++++.. ||+|+++++|++++.|+.+++.
T Consensus 142 la~al~~~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 142 IARALVTRPKLLLLDEPTEGIQPSIIKDIGR-VIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999887765 454443 27899999999999885 9999999999999999988873
No 490
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-33 Score=318.14 Aligned_cols=197 Identities=25% Similarity=0.409 Sum_probs=161.7
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|
T Consensus 3 l~~~~l~~~~~~--------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~~ 73 (255)
T PRK11231 3 LRTENLTVGYGT--------KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTV-FLGDKPISMLSSRQ 73 (255)
T ss_pred EEEEeEEEEECC--------EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEE-EECCEEhHHCCHHH
Confidence 789999999963 368999 99999999999999999999999999999999999986 6665
Q ss_pred ---EEEEEcCCCCCCCC-cHHHHHhcCCC-----C---CH---HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChH
Q 000504 660 ---KKAYVPQSSWIQTG-TIRENILFGKD-----M---RQ---SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGG 724 (1458)
Q Consensus 660 ---~~ayv~Q~~~i~~~-Ti~enI~fg~~-----~---~~---~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGG 724 (1458)
.++|++|++.++.. |+.||+.++.. + .+ ++.+++++.+++.+ ........||||
T Consensus 74 ~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G 142 (255)
T PRK11231 74 LARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINH-----------LADRRLTDLSGG 142 (255)
T ss_pred HhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHH-----------HHcCCcccCCHH
Confidence 27999999877654 99999998631 1 11 12233333333322 234567799999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCeEEEccc
Q 000504 725 QKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGKIEQSGK 802 (1458)
Q Consensus 725 QkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~ 802 (1458)
||||++||||+..+|+++||||||++||+.+.+.+.+ .+..+. +++|+|++||+++.+.. ||+|++|++|++...|+
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 221 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMR-LMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGT 221 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcC
Confidence 9999999999999999999999999999999877765 454443 47999999999999865 99999999999999999
Q ss_pred chhhhh
Q 000504 803 YEDLIA 808 (1458)
Q Consensus 803 ~~~l~~ 808 (1458)
++++..
T Consensus 222 ~~~~~~ 227 (255)
T PRK11231 222 PEEVMT 227 (255)
T ss_pred HHHhcC
Confidence 888754
No 491
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-33 Score=320.70 Aligned_cols=201 Identities=27% Similarity=0.445 Sum_probs=164.3
Q ss_pred ccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--------
Q 000504 589 VAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-------- 659 (1458)
Q Consensus 589 ~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g-------- 659 (1458)
..++++|++++|+.. ..+.+++ ||++++||+++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 6 ~~l~~~nl~~~~~~~------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I-~~~g~~i~~~~~ 78 (271)
T PRK13632 6 VMIKVENVSFSYPNS------ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEI-KIDGITISKENL 78 (271)
T ss_pred eEEEEEeEEEEcCCC------CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EECCEecCcCCH
Confidence 358999999999632 2468999 99999999999999999999999999999999999986 6655
Q ss_pred -----EEEEEcCCCC--CCCCcHHHHHhcCCC---CCHHH----HHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 -----KKAYVPQSSW--IQTGTIRENILFGKD---MRQSF----YEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 -----~~ayv~Q~~~--i~~~Ti~enI~fg~~---~~~~~----y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
.++|++|+|. +++.|++||+.++.. ++.+. .+++++..++.+ .......+|||||
T Consensus 79 ~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~ 147 (271)
T PRK13632 79 KEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMED-----------YLDKEPQNLSGGQ 147 (271)
T ss_pred HHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHH-----------HhhCCcccCCHHH
Confidence 3699999983 567899999998632 22222 233334444432 2345667999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhccCCEEEEEeCCeEEEcccc
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKY 803 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~ 803 (1458)
|||++||||++.+|+++||||||++||+.+.+.+++ .+..+. + ++|+|++||+++.+..||+|++|++|++.+.|+.
T Consensus 148 ~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~ 226 (271)
T PRK13632 148 KQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKK-IMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKP 226 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCH
Confidence 999999999999999999999999999999888776 454443 3 4899999999998878999999999999999988
Q ss_pred hhhhh
Q 000504 804 EDLIA 808 (1458)
Q Consensus 804 ~~l~~ 808 (1458)
+++..
T Consensus 227 ~~~~~ 231 (271)
T PRK13632 227 KEILN 231 (271)
T ss_pred HHHhc
Confidence 87754
No 492
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-33 Score=317.95 Aligned_cols=198 Identities=19% Similarity=0.339 Sum_probs=161.4
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE--------
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK-------- 660 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~-------- 660 (1458)
.++++|+++.|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+++|++|++ .++|.
T Consensus 5 ~l~~~~l~~~~~~--------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i-~~~g~~~~~~~~~ 75 (255)
T PRK11300 5 LLSVSGLMMRFGG--------LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTI-LLRGQHIEGLPGH 75 (255)
T ss_pred eEEEeeEEEEECC--------EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceE-EECCEECCCCCHH
Confidence 5899999999953 368999 99999999999999999999999999999999999986 66652
Q ss_pred ------EEEEcCCCCCCC-CcHHHHHhcCCCC----------------CH------HHHHHHHHHhhhhhhHHhhcCCCc
Q 000504 661 ------KAYVPQSSWIQT-GTIRENILFGKDM----------------RQ------SFYEEVLEGCALNQDIEMWADGDL 711 (1458)
Q Consensus 661 ------~ayv~Q~~~i~~-~Ti~enI~fg~~~----------------~~------~~y~~vl~~c~l~~dl~~l~~gd~ 711 (1458)
++|++|++.++. .|++||+.++... ++ ++.++.++..++ .
T Consensus 76 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~ 144 (255)
T PRK11300 76 QIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGL-----------L 144 (255)
T ss_pred HHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCCh-----------h
Confidence 688999998876 5999999986310 00 011111222221 2
Q ss_pred ccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhcc-CCE
Q 000504 712 SVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLDA-ADL 788 (1458)
Q Consensus 712 t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~D~ 788 (1458)
...+.+..+||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+. + ++|+|++||+++++.. ||+
T Consensus 145 ~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~L~~~~~~~~~tii~~sH~~~~~~~~~d~ 223 (255)
T PRK11300 145 EHANRQAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDE-LIAELRNEHNVTVLLIEHDMKLVMGISDR 223 (255)
T ss_pred hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHH-HHHHHHhhcCCEEEEEeCCHHHHHHhCCE
Confidence 23456778999999999999999999999999999999999999887765 454443 3 7899999999999865 999
Q ss_pred EEEEeCCeEEEcccchhhhh
Q 000504 789 VLVMKDGKIEQSGKYEDLIA 808 (1458)
Q Consensus 789 i~~l~~G~i~~~g~~~~l~~ 808 (1458)
+++|++|++++.|+.+++..
T Consensus 224 i~~l~~g~i~~~~~~~~~~~ 243 (255)
T PRK11300 224 IYVVNQGTPLANGTPEEIRN 243 (255)
T ss_pred EEEEECCeEEecCCHHHHhh
Confidence 99999999999999887754
No 493
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-33 Score=317.49 Aligned_cols=202 Identities=24% Similarity=0.330 Sum_probs=162.3
Q ss_pred cEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC-----CCCcEEEECC----
Q 000504 590 AIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG---- 659 (1458)
Q Consensus 590 ~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g---- 659 (1458)
.++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|+++| ++|++ .++|
T Consensus 4 ~l~~~~l~~~~~~--------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i-~~~g~~i~ 74 (253)
T PRK14267 4 AIETVNLRVYYGS--------NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEV-RLFGRNIY 74 (253)
T ss_pred eEEEEeEEEEeCC--------eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEE-EECCEEcc
Confidence 4789999999963 358999 999999999999999999999999999999987 48986 5544
Q ss_pred -----------EEEEEcCCCCCCC-CcHHHHHhcCCCC-----CHHH----HHHHHHHhhhhhhHHhhcCCCcccccCCC
Q 000504 660 -----------KKAYVPQSSWIQT-GTIRENILFGKDM-----RQSF----YEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1458)
Q Consensus 660 -----------~~ayv~Q~~~i~~-~Ti~enI~fg~~~-----~~~~----y~~vl~~c~l~~dl~~l~~gd~t~ig~~g 718 (1458)
.++|++|++.++. .|++||+.++... ..+. .+++++..++..++. ...+...
T Consensus 75 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~ 147 (253)
T PRK14267 75 SPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYP 147 (253)
T ss_pred ccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccCh
Confidence 3799999998875 5999999875321 1111 122233223222111 1245677
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeE
Q 000504 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1458)
Q Consensus 719 ~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i 797 (1458)
.+||||||||++||||++++|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++++.. ||+|++|++|++
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i 226 (253)
T PRK14267 148 SNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEE-LLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKL 226 (253)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEE
Confidence 8999999999999999999999999999999999999887765 45555557999999999999765 999999999999
Q ss_pred EEcccchhhhh
Q 000504 798 EQSGKYEDLIA 808 (1458)
Q Consensus 798 ~~~g~~~~l~~ 808 (1458)
++.|+.+++.+
T Consensus 227 ~~~~~~~~~~~ 237 (253)
T PRK14267 227 IEVGPTRKVFE 237 (253)
T ss_pred EEeCCHHHHHh
Confidence 99999988765
No 494
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.9e-33 Score=311.92 Aligned_cols=186 Identities=26% Similarity=0.425 Sum_probs=151.4
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+.+ .+.+++ ||++++|++++|+||||||||||+++|+|+.+|++|++ .++|
T Consensus 2 l~~~~l~~~~~~~-------~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i-~~~g~~~~~~~~~~ 73 (214)
T TIGR02673 2 IEFHNVSKAYPGG-------VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQV-RIAGEDVNRLRGRQ 73 (214)
T ss_pred EEEEeeeEEeCCC-------ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEEcccCCHHH
Confidence 6789999999522 368999 99999999999999999999999999999999999986 5554
Q ss_pred ------EEEEEcCCCCCCC-CcHHHHHhcCCC---CC----HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 ------KKAYVPQSSWIQT-GTIRENILFGKD---MR----QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~enI~fg~~---~~----~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
.++|++|+|.++. .|++||+.++.. .+ +++.++.++..++.+. ......+|||||
T Consensus 74 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~ 142 (214)
T TIGR02673 74 LPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHK-----------ADAFPEQLSGGE 142 (214)
T ss_pred HHHHHhheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHH
Confidence 3799999998875 699999987632 11 1233344444444322 233456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCcEEEEEecccchhcc-CCEEEEEeCCe
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-SQKTVLYTTHQLEFLDA-ADLVLVMKDGK 796 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~ 796 (1458)
|||++||||++.+|+++||||||++||+.+...+.+ .+..+. +++|+|++||+++++.. ||+|++|++|+
T Consensus 143 ~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 143 QQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILD-LLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999887766 444443 58999999999999875 99999999985
No 495
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=4.3e-33 Score=313.66 Aligned_cols=195 Identities=31% Similarity=0.428 Sum_probs=153.0
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+... ...+.+++ |+++++||+++|+||||||||||+++|+|+++|++|++ .++|
T Consensus 2 l~~~~v~~~~~~~~----~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~~~~ 76 (228)
T cd03257 2 LEVKNLSVSFPTGG----GSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSI-IFDGKDLLKLSRRL 76 (228)
T ss_pred eEEEeeeEeccCCC----cceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE-EECCEEccccchhh
Confidence 67899999996420 11368999 99999999999999999999999999999999999986 5554
Q ss_pred ------EEEEEcCCCC--C-CCCcHHHHHhcCCCC-----CHHHHH----HHHHHhhhhhhHHhhcCCCcccccCCCCCC
Q 000504 660 ------KKAYVPQSSW--I-QTGTIRENILFGKDM-----RQSFYE----EVLEGCALNQDIEMWADGDLSVVGERGINL 721 (1458)
Q Consensus 660 ------~~ayv~Q~~~--i-~~~Ti~enI~fg~~~-----~~~~y~----~vl~~c~l~~dl~~l~~gd~t~ig~~g~~L 721 (1458)
.++|++|++. + ...|++||+.++... ++...+ +.++..++. ....+....+|
T Consensus 77 ~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~L 146 (228)
T cd03257 77 RKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLP----------EEVLNRYPHEL 146 (228)
T ss_pred HHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCC----------hhHhhCCchhc
Confidence 3799999983 3 357999999865211 111111 122222221 12345677899
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh-C-CcEEEEEecccchhc-cCCEEEEEeCCeEE
Q 000504 722 SGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL-S-QKTVLYTTHQLEFLD-AADLVLVMKDGKIE 798 (1458)
Q Consensus 722 SGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~ 798 (1458)
|||||||++||||++.+|+++||||||++||+.+.+.+.+ .+..+. + ++|+|++||+++.+. .||+|++|++|+++
T Consensus 147 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~ 225 (228)
T cd03257 147 SGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILD-LLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIV 225 (228)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEE
Confidence 9999999999999999999999999999999999777765 455443 3 799999999999987 59999999999998
Q ss_pred Ecc
Q 000504 799 QSG 801 (1458)
Q Consensus 799 ~~g 801 (1458)
..|
T Consensus 226 ~~g 228 (228)
T cd03257 226 EEG 228 (228)
T ss_pred ecC
Confidence 654
No 496
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.3e-33 Score=311.45 Aligned_cols=187 Identities=28% Similarity=0.390 Sum_probs=151.7
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC----------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG---------- 659 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g---------- 659 (1458)
++++|++++|+.. .+.+++ ||++++|++++|+|+||||||||+++|+|.++|++|++ .++|
T Consensus 1 l~~~~l~~~~~~~-------~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~i~~~~~~~ 72 (214)
T cd03292 1 IEFINVTKTYPNG-------TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTI-RVNGQDVSDLRGRA 72 (214)
T ss_pred CEEEEEEEEeCCC-------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEE-EECCEEcccCCHHH
Confidence 4688999998632 357899 99999999999999999999999999999999999986 6655
Q ss_pred ------EEEEEcCCCCCCC-CcHHHHHhcCCCC---CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHH
Q 000504 660 ------KKAYVPQSSWIQT-GTIRENILFGKDM---RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQ 725 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~-~Ti~enI~fg~~~---~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 725 (1458)
.++|++|++.++. .|++||+.++... .. ++.++.++.+++.+. ......+|||||
T Consensus 73 ~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~ 141 (214)
T cd03292 73 IPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHK-----------HRALPAELSGGE 141 (214)
T ss_pred HHHHHHheEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCChhhcCHHH
Confidence 3799999998776 5999999886321 11 122334444444322 234556899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHH-hCCcEEEEEecccchhcc-CCEEEEEeCCeE
Q 000504 726 KQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGL-LSQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1458)
Q Consensus 726 kqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i 797 (1458)
|||++||||++.+|+++||||||++||+++.+.+.+ .+..+ .+++|+|++||+++++.. ||+|++|++|++
T Consensus 142 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~-~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 142 QQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMN-LLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999887765 45444 358999999999999875 999999999974
No 497
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.1e-33 Score=312.05 Aligned_cols=197 Identities=24% Similarity=0.376 Sum_probs=159.4
Q ss_pred CccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC-------
Q 000504 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG------- 659 (1458)
Q Consensus 588 ~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g------- 659 (1458)
+..++++|++++|+. .+.+++ ||++++||+++|+||||||||||+++|+|+.+|++|++ .++|
T Consensus 5 ~~~i~~~~l~~~~~~--------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~g~~~~~~~ 75 (225)
T PRK10247 5 SPLLQLQNVGYLAGD--------AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTL-LFEGEDISTLK 75 (225)
T ss_pred CceEEEeccEEeeCC--------ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeE-EECCEEcCcCC
Confidence 346899999999853 358899 99999999999999999999999999999999999987 6665
Q ss_pred ------EEEEEcCCCCCCCCcHHHHHhcCCCC-----CHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHH
Q 000504 660 ------KKAYVPQSSWIQTGTIRENILFGKDM-----RQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQR 728 (1458)
Q Consensus 660 ------~~ayv~Q~~~i~~~Ti~enI~fg~~~-----~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 728 (1458)
.++|++|++.+++.|++||+.++..+ ++++.++.++..++.. +..+..+.+||||||||
T Consensus 76 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qr 145 (225)
T PRK10247 76 PEIYRQQVSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQR 145 (225)
T ss_pred HHHHHhccEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHH
Confidence 37999999999888999999875321 1122233333333321 23456788999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhccCCEEEEEe-CCeEEEcccch
Q 000504 729 IQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLDAADLVLVMK-DGKIEQSGKYE 804 (1458)
Q Consensus 729 v~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~D~i~~l~-~G~i~~~g~~~ 804 (1458)
++||||++++|+++||||||++||+.+...+.+ ++..+. .++|+|++||++++++.||++++|+ ++..+++|+|+
T Consensus 146 v~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 146 ISLIRNLQFMPKVLLLDEITSALDESNKHNVNE-IIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999999998776654 555543 3789999999999998899999995 66667777764
No 498
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=5e-33 Score=296.87 Aligned_cols=160 Identities=28% Similarity=0.453 Sum_probs=142.7
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECC--EEEEEcCC
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG--KKAYVPQS 667 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g--~~ayv~Q~ 667 (1458)
++++|++++|+.. .+.+++ |+++++|++++|+|+||||||||+++|+|+.+|++|++ .++| .++|++|+
T Consensus 1 i~~~~~~~~~~~~-------~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i-~~~~~~~i~~~~q~ 72 (166)
T cd03223 1 IELENLSLATPDG-------RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRI-GMPEGEDLLFLPQR 72 (166)
T ss_pred CEEEEEEEEcCCC-------CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE-EECCCceEEEECCC
Confidence 4688999999632 358899 99999999999999999999999999999999999997 7876 79999999
Q ss_pred CCCCCCcHHHHHhcCCCCCHHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCC
Q 000504 668 SWIQTGTIRENILFGKDMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDP 747 (1458)
Q Consensus 668 ~~i~~~Ti~enI~fg~~~~~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i~lLDep 747 (1458)
+.+++.|++||+.++ ...+||||||||++||||++++|+++|||||
T Consensus 73 ~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEP 118 (166)
T cd03223 73 PYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEA 118 (166)
T ss_pred CccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 998889999999764 2468999999999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhccCCEEEEEeCC
Q 000504 748 FSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDG 795 (1458)
Q Consensus 748 ~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G 795 (1458)
|++||+++.+.+.+ .+... ++|+|++||+.++...||+|++|++|
T Consensus 119 t~~LD~~~~~~l~~-~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 119 TSALDEESEDRLYQ-LLKEL--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred ccccCHHHHHHHHH-HHHHh--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 99999999887765 44443 68999999999887779999999875
No 499
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-33 Score=316.24 Aligned_cols=197 Identities=26% Similarity=0.437 Sum_probs=162.0
Q ss_pred EEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccCCCCcEEEECCE---------
Q 000504 591 IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHGK--------- 660 (1458)
Q Consensus 591 I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~i~~~g~--------- 660 (1458)
++++|++++|+. .+.+++ ||++++|++++|+|+||||||||+++|+|+.+|++|++ .++|.
T Consensus 3 l~~~~l~~~~~~--------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i-~~~g~~~~~~~~~~ 73 (258)
T PRK13548 3 LEARNLSVRLGG--------RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEV-RLNGRPLADWSPAE 73 (258)
T ss_pred EEEEeEEEEeCC--------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEE-EECCEEcccCCHHH
Confidence 788999999863 358999 99999999999999999999999999999999999986 66662
Q ss_pred ----EEEEcCCCCC-CCCcHHHHHhcCCCCC-------HHHHHHHHHHhhhhhhHHhhcCCCcccccCCCCCCChHHHHH
Q 000504 661 ----KAYVPQSSWI-QTGTIRENILFGKDMR-------QSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQR 728 (1458)
Q Consensus 661 ----~ayv~Q~~~i-~~~Ti~enI~fg~~~~-------~~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 728 (1458)
++|++|++.+ ++.|++||+.++.... +++.++.++..++.. .......+||||||||
T Consensus 74 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGe~qr 142 (258)
T PRK13548 74 LARRRAVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAH-----------LAGRDYPQLSGGEQQR 142 (258)
T ss_pred hhhheEEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHh-----------HhcCCcccCCHHHHHH
Confidence 6999999877 6789999998864211 122233344333322 2345667999999999
Q ss_pred HHHHHHHc------cCCCEEEEeCCCCCCChhhHHHHHHHHHHHHh--CCcEEEEEecccchhc-cCCEEEEEeCCeEEE
Q 000504 729 IQLARAVY------SNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLL--SQKTVLYTTHQLEFLD-AADLVLVMKDGKIEQ 799 (1458)
Q Consensus 729 v~LARAl~------~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~ 799 (1458)
++||||++ .+|+++||||||++||+.+...+.+ ++..+. .++|||++||+++++. .||+|++|++|++++
T Consensus 143 v~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 221 (258)
T PRK13548 143 VQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLR-LARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVA 221 (258)
T ss_pred HHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEe
Confidence 99999999 5999999999999999999877765 555543 4799999999999987 599999999999999
Q ss_pred cccchhhhh
Q 000504 800 SGKYEDLIA 808 (1458)
Q Consensus 800 ~g~~~~l~~ 808 (1458)
.|+++++..
T Consensus 222 ~~~~~~~~~ 230 (258)
T PRK13548 222 DGTPAEVLT 230 (258)
T ss_pred eCCHHHHhC
Confidence 999888764
No 500
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-33 Score=319.91 Aligned_cols=204 Identities=27% Similarity=0.404 Sum_probs=165.6
Q ss_pred CccEEEeeeEEEeCCcccccCCCcccccC-cEEeeCCcEEEEEccCCCChhHHHHHHhCCccC-----CCCcEEEECC--
Q 000504 588 DVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR-----ISGAAIKVHG-- 659 (1458)
Q Consensus 588 ~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~~i~~~g-- 659 (1458)
...++++|++++|+. .+.+++ ||++++||+++|+|+||||||||+++|+|..++ ++|++ .++|
T Consensus 23 ~~~l~~~nl~~~~~~--------~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i-~i~g~~ 93 (272)
T PRK14236 23 QTALEVRNLNLFYGD--------KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEI-RLDGQN 93 (272)
T ss_pred CcEEEEEEEEEEECC--------eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEE-EECCEE
Confidence 346899999999953 358999 999999999999999999999999999999873 78986 5543
Q ss_pred -------------EEEEEcCCCCCCCCcHHHHHhcCCCC----CH----HHHHHHHHHhhhhhhHHhhcCCCcccccCCC
Q 000504 660 -------------KKAYVPQSSWIQTGTIRENILFGKDM----RQ----SFYEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1458)
Q Consensus 660 -------------~~ayv~Q~~~i~~~Ti~enI~fg~~~----~~----~~y~~vl~~c~l~~dl~~l~~gd~t~ig~~g 718 (1458)
.++|++|++.++..|++||+.++... .+ ++.+++++..++.+++. +..+.++
T Consensus 94 i~~~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~ 166 (272)
T PRK14236 94 IYDKKVDVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENA 166 (272)
T ss_pred CcccccCHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCc
Confidence 47999999998888999999876321 11 12233334334432222 2346778
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCChhhHHHHHHHHHHHHhCCcEEEEEecccchhcc-CCEEEEEeCCeE
Q 000504 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDA-ADLVLVMKDGKI 797 (1458)
Q Consensus 719 ~~LSGGQkqRv~LARAl~~~~~i~lLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i 797 (1458)
.+|||||||||+||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++.. ||+|++|++|++
T Consensus 167 ~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~-~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i 245 (272)
T PRK14236 167 FGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEE-LITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKL 245 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEE
Confidence 8999999999999999999999999999999999998777654 56555567899999999999764 999999999999
Q ss_pred EEcccchhhhh
Q 000504 798 EQSGKYEDLIA 808 (1458)
Q Consensus 798 ~~~g~~~~l~~ 808 (1458)
++.|+.+++..
T Consensus 246 ~~~g~~~~~~~ 256 (272)
T PRK14236 246 VEYGDTDTLFT 256 (272)
T ss_pred EecCCHHHHhc
Confidence 99999888765
Done!