Query 000504
Match_columns 1458
No_of_seqs 478 out of 5911
Neff 7.4
Searched_HMMs 29240
Date Tue Mar 26 17:45:58 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000504.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_276-280//hhsearch_pdb/000504hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1601.6 120.1 1208 221-1445 1-1317(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1285.6 110.1 1160 272-1448 45-1274(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 759.1 68.3 515 928-1445 137-654 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 720.3 56.1 514 928-1444 109-625 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 691.7 58.7 561 878-1446 26-592 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 687.0 63.6 564 876-1445 10-579 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 668.3 61.6 558 879-1442 4-574 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 664.3 69.2 560 877-1444 13-579 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 662.7 72.4 560 877-1444 13-579 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 657.6 69.8 547 896-1445 24-584 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1601.63 Aligned_cols=1208 Identities=18% Similarity=0.206 Sum_probs=913.4
Q ss_pred HHHHHC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-----------C----CCCHHHHHHHHH-HHHH---HHH
Q ss_conf 999422-4988878899999489499999999999985126-----------9----998689999999-9989---999
Q 000504 221 LFQRGR-IQKLELLHIPPIPQSETANDASSLLEESLRKQKT-----------D----ATSLPQVIIHAV-WKSL---ALN 280 (1458)
Q Consensus 221 l~~~g~-~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~-----------~----~~~l~~al~~~~-~~~~---~~~ 280 (1458)
+++.|. +++|+..|.+++.|+|..+...+.+++.|..... + ++.-++.||+.- +.+. +++
T Consensus 1 ~~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 1 MLRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp ---CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHH
T ss_conf 98773100687635445679501110000113454243554334310012232025687799997315676789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC-------CC-------CC-CH----H---HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999998649-------99-------97-40----6---899999999999999999999999
Q 000504 281 AAFAGVNTIASYIGPFLITNFVSFLSG-------KH-------DH-SS----Y---HYGLVLASVFLFAKTVESLTQRQW 338 (1458)
Q Consensus 281 ~~~~l~~~~~~~~~P~ll~~~i~~~~~-------~~-------~~-~~----~---~~g~~l~~~l~~~~~~~~l~~~~~ 338 (1458)
.+++++..++.-+.++++..+++.+.. .. .. .. . ...+.++...+...++..+....|
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999986011247---9997899999986399999999-9999999999999998999988845
Q 000504 339 YFGANRIGIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFF-LYIHRIWLLPVQVFLALVILYKNLG 414 (1458)
Q Consensus 339 ~~~~~~~g~rir~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~-~~~~~~w~~plqi~i~l~~L~~~lG 414 (1458)
.+.+.++..++ ...+|+|.++++.. .+++|+++|.+++|++++.+++ ..++.++..+++++.++++++ .++
T Consensus 161 ~~~~~r~~~~l----R~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~-~~~ 235 (1321)
T 4f4c_A 161 LYVAEQMNNRL----RREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAF-THS 235 (1321)
T ss_dssp HHHHHHHHHHH----HHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHH-HHC
T ss_pred HHHHHHHHHHH----HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_conf 99999999999----9999999978898998799848999999999999999999999999999999999999999-998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999999899999999999999999999999999998116999985418999999999999999999999
Q 000504 415 AAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKY 494 (1458)
Q Consensus 415 ~~~~l~gl~~~~~~~~~~~~l~~~~~~~~~~~m~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~ 494 (1458)
|..+++.++++++.+++...+++...++..+.++..+++.+.++|.++|||+||+|+||+.+.+++.+..++..+...+.
T Consensus 236 ~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 315 (1321)
T 4f4c_A 236 WQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLK 315 (1321)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999839999982142999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999899999999998--999999999999833887889999999999999999999999999999999999999998614
Q 000504 495 LYTCSAIAFLFWASP--TLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKE 572 (1458)
Q Consensus 495 ~~~~a~~~~~~~~~p--~~v~~~tf~~~~~~~~~L~~~~vft~la~f~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~ 572 (1458)
....+.......... ..+.+++++.+.+.++.++++.+|+++.++..+..|+..++..+..+.++.+|++||.+||+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 395 (1321)
T 4f4c_A 316 GLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDR 395 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999995998699999999999999999998999999999999999999999717
Q ss_pred CCCCCCC--CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHCCCCC
Q ss_conf 4899998--8889889984089963499707865456788533357-678508949999815899936899887077658
Q 000504 573 DNQKKPI--TEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR 649 (1458)
Q Consensus 573 ~e~~~~~--~~~~~~~~~~~i~i~~~~fsw~~~~~~~~~~~~~L~~-nl~i~~G~~~~i~G~~GsGKStLl~~ilGe~~~ 649 (1458)
++..+.. ...+.......|+++|++|+|+.. +..+.|+| ||++++|+++||+|++|||||||+++|+|++++
T Consensus 396 ~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~-----~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~ 470 (1321)
T 4f4c_A 396 KPVIDSSSKAGRKDMKIKGDITVENVHFTYPSR-----PDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDV 470 (1321)
T ss_dssp SCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSS-----TTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC-----CCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCC
T ss_conf 853456665565677888767999855407999-----987433331886228827899805898577888875456516
Q ss_pred CCCCEEEECC-------------EEEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9984899889-------------7789817787888758899723977-8978999999981000368861079863026
Q 000504 650 ISGAAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVG 715 (1458)
Q Consensus 650 ~~G~vi~~~g-------------~iayv~Q~~wi~~~TIreNIlfg~~-~~~~~y~~vi~~c~L~~di~~lp~Gd~t~ig 715 (1458)
.+|++ .++| +++||+|+||++++||||||+||+| .+++++.++++.|++++|++.||+||+|+||
T Consensus 471 ~~G~I-~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vG 549 (1321)
T 4f4c_A 471 LKGKI-TIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVG 549 (1321)
T ss_dssp SEEEE-EETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEES
T ss_pred CCCCC-CCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEEC
T ss_conf 44861-57996501125999850466658753320786167886415522099999999875654688708888860755
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHCCCCEEEEEECC
Q ss_conf 89987886899999999987139989998087777896569999999998870896799970563201017889999298
Q 000504 716 ERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDG 795 (1458)
Q Consensus 716 e~G~~LSGGQkqRi~LARAly~~~~i~lLDdp~salD~~~~~~if~~~i~~~l~~kTvIlvTH~~~~l~~~D~I~vl~~G 795 (1458)
|+|.+|||||||||+||||+|++|+|++|||||||||++++ +++++++.+++++||+|+|||+++.++.||+|++|++|
T Consensus 550 e~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te-~~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G 628 (1321)
T 4f4c_A 550 DRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESE-GIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNG 628 (1321)
T ss_dssp SSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTH-HHHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETT
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH-HHHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECC
T ss_conf 89887777787999999987259998998455446887899-99999999984798899973638789868989996399
Q ss_pred EEEECCCCHHHHHHCCHHHHHHHHHHHHHC-----CCCCCCCCCCCC----CCC----CCCCCCHHHHCCCC-CCCCCCC
Q ss_conf 698803603566411069999999843102-----689999878656----567----66765100000148-8887888
Q 000504 796 KIEQSGKYEDLIADQNSELVRQMKAHRKSL-----DQVNPPQEDKCL----SRV----PCQMSQITEERFAR-PISCGEF 861 (1458)
Q Consensus 796 ~i~~~G~~~el~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~-~~~~~~~ 861 (1458)
+|++.|+|+||++ .++.|.++...+.... .......+.... ... +.........+... .......
T Consensus 629 ~ive~Gth~eL~~-~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1321)
T 4f4c_A 629 QVVEVGDHRALMA-QQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITN 707 (1321)
T ss_dssp EEEEEECHHHHHT-TTCHHHHHHHHHHHHHHHHHHHCC------------------------------------------
T ss_pred EEECCCCHHHHHH-HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 6513689999998-532799999962212222332334433223211122222342222222110221110132124567
Q ss_pred CCCCCCCHHHCCC---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCC
Q ss_conf 9887300000175---------------117889999998513479999999999999997324667886301---1233
Q 000504 862 SGRSQDEDTELGR---------------VKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATD---EKRK 923 (1458)
Q Consensus 862 ~~l~~~e~~~~g~---------------v~~~~y~~y~~~~~~~~l~~~~~l~~~~~~~~~~~s~~wl~~~~~---~~~~ 923 (1458)
.....+++++.|. ..+..++.|......+..+.+.+++.++.........+|+..|.+ ..+.
T Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1321)
T 4f4c_A 708 GPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPA 787 (1321)
T ss_dssp --------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSS
T ss_pred CCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 74025777531540389999999970786310999999987789999999999999999999999999999987517934
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCHHHHHHHHHHHHHHHH
Q ss_conf ---551026789999887899999999999999999999999999988770576222234--570348999831265876
Q 000504 924 ---VSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDS--TPSSRILNRCSTDQSTVD 998 (1458)
Q Consensus 924 ---~~~~~~i~~y~~l~~~~~~~~~~r~~~~~~~~~~~s~~l~~~l~~~il~ap~~ffd~--tp~GrilnR~s~D~~~id 998 (1458)
.....+..+|++++++..++.+++.++....+.+++.++|.+++++++++|++|||+ +|+|+++||+++|+..+|
T Consensus 788 ~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~ 867 (1321)
T 4f4c_A 788 DFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLR 867 (1321)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHH
T ss_conf 55667899999999999999999999999999999999999999998887349933321678884888850250599999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 21699999999999999999999999976899999999999999999999999999999846211179899996611599
Q 000504 999 TDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATT 1078 (1458)
Q Consensus 999 ~~i~~~l~~~~~~~~~~~~~i~v~~~~~~~~~~v~i~~~~l~~~~~~~y~~~~r~l~r~~~~~~spi~~~~~Eti~G~~t 1078 (1458)
..++..+..++..++.+++.+++++..+|.+.+++++++++.++...++.+..+...+......+....++.|++.|+.+
T Consensus 868 ~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~t 947 (1321)
T 4f4c_A 868 TAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRT 947 (1321)
T ss_dssp TTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999986537777022137868999999998889999999999999999999999988898899999962798
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 98615168999999999999877799998676799999999999999999999---986127876888999999999999
Q 000504 1079 IRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII---LVTLPRSAIDPSLAGLAATYGLNL 1155 (1458)
Q Consensus 1079 IRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~---~v~~~~~~~~~~~~gl~lsy~l~l 1155 (1458)
||+|++|++|.+++.+..+...+..+.......+.......+..+....+..+ ++........++.+...+.+....
T Consensus 948 Ira~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~ 1027 (1321)
T 4f4c_A 948 VQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITIS 1027 (1321)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 88614148899999999999999999999999999999999999999999987578875376542147899999999877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEEEC
Q ss_conf 99999999999999996527999999735999886434789999999998627999446884799-89502211689618
Q 000504 1156 NVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPG 1234 (1458)
Q Consensus 1156 ~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i~~ 1234 (1458)
...+.++...+.+++..+.+++|+.++.+.++|.+ +...+++.||..|.|+|+||+|+|+.. ..+||+|+||+|++
T Consensus 1028 ~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~---~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~ 1104 (1321)
T 4f4c_A 1028 TSTLGFATSYFPEYAKATFAGGIIFGMLRKISKID---SLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEP 1104 (1321)
T ss_dssp TSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSC---TTCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECC
T ss_conf 88999999999999999999998999860766577---766778788888818999879857999988212451699889
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCC---CCCCH
Q ss_conf 949999889999877999998216779973899969617999978874130898167777656577703869---99999
Q 000504 1235 EKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQHSD 1311 (1458)
Q Consensus 1235 GekvgIVGrTGSGKSTLi~~L~rl~ep~~G~I~IDG~dI~~i~l~~LRs~isiIpQdp~LF~gTIR~NLdp~---~~~sD 1311 (1458)
|||||||||||||||||+++|+|+|+|++|+|.|||+||+++++++||+++++|||||+||+||||+||... ++++|
T Consensus 1105 Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd 1184 (1321)
T 4f4c_A 1105 GQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTM 1184 (1321)
T ss_dssp TCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCH
T ss_pred CCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCH
T ss_conf 89999989999819999999956863899789999998654999999854599878997327239999745499999999
Q ss_pred HHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 99999999849289998400145753447999899159999999998605998799847677999998999999999864
Q 000504 1312 QEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREET 1391 (1458)
Q Consensus 1312 eeI~~aL~~~~L~~~i~~lp~gLdt~V~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~~ 1391 (1458)
+|||+|+++++++++|.++|+||||.|+|+|.|||||||||+|||||+||+|+|||||||||++|++||+.||++|++.+
T Consensus 1185 ~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~ 1264 (1321)
T 4f4c_A 1185 AQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAR 1264 (1321)
T ss_dssp HHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
T ss_conf 99999999829849997176789998238891569999999999999971799899968111578999999999999973
Q ss_pred CCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 994789972491234102989999498797845934786219984899999998
Q 000504 1392 SRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1392 ~~~TVI~IAHRl~ti~~~DrVlvL~~G~ivE~gsp~~Ll~~~~s~f~~l~~~~~ 1445 (1458)
++||+|+||||++|+++||+|+|||+|+|+|+|+|++|+++ +|.|++|++...
T Consensus 1265 ~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~-~g~y~~L~~~Q~ 1317 (1321)
T 4f4c_A 1265 EGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSE-KGAYYKLTQKQM 1317 (1321)
T ss_dssp SSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHC-C-----------
T ss_pred CCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHH
T ss_conf 99989996068999996999999989899998888999849-809999999998
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1285.55 Aligned_cols=1160 Identities=18% Similarity=0.201 Sum_probs=847.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------CCC---------HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998999999999999999999999999999864999--------974---------0689999999999999999999
Q 000504 272 AVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKH--------DHS---------SYHYGLVLASVFLFAKTVESLT 334 (1458)
Q Consensus 272 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~--------~~~---------~~~~g~~l~~~l~~~~~~~~l~ 334 (1458)
..|..+++..++.++..++..+.|+++..+++.+.... ... .......++..++...++..++
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1284)
T 3g5u_A 45 LDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIV 124 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999999999999999999999986134443322222211111002446889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999986011247---999789999998639999999999-9999999999999899998
Q 000504 335 QRQWYFGANRIGIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILY 410 (1458)
Q Consensus 335 ~~~~~~~~~~~g~rir~~L~~~Iy~K~L~ls~~---~~~~G~ivnlms~D~~~i~~~~~~-~~~~w~~plqi~i~l~~L~ 410 (1458)
.....+...+.+.++-..+...+|+|.++++.. ..++|+++|.++.|++.+.+++.. +..+....+.++.++++++
T Consensus 125 ~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 204 (1284)
T 3g5u_A 125 AYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGF 204 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999986998997568877899999988999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88456899999999999999989999999999999999999999999999811699998541899999999999999999
Q 000504 411 KNLGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDS 490 (1458)
Q Consensus 411 ~~lG~~~~l~gl~~~~~~~~~~~~l~~~~~~~~~~~m~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~ 490 (1458)
.++|..+++.+++++++..+...+.+...+...+.++..++......|.++||++||.|++|+.+.++..+.-+.-.+.
T Consensus 205 -~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~ 283 (1284)
T 3g5u_A 205 -TRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRL 283 (1284)
T ss_dssp -HTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf -9989999999999999999999999999999999999999999999999978799998465399999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999998999999999--9899999999999983388788999999999999999999999999999999999999999
Q 000504 491 LKKYLYTCSAIAFLFWA--SPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQE 568 (1458)
Q Consensus 491 l~~~~~~~a~~~~~~~~--~p~~v~~~tf~~~~~~~~~L~~~~vft~la~f~~l~~pl~~lp~~i~~~~~a~vS~~RI~~ 568 (1458)
..+.....+....+... ....+.++++|.+.+..+.++++.+++++........|+..+...+..+.++..+.+|+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~ 363 (1284)
T 3g5u_A 284 GIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFK 363 (1284)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999299889999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCC--CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHC
Q ss_conf 8614489999--88889889984089963499707865456788533357-67850894999981589993689988707
Q 000504 569 FIKEDNQKKP--ITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILG 645 (1458)
Q Consensus 569 fL~~~e~~~~--~~~~~~~~~~~~i~i~~~~fsw~~~~~~~~~~~~~L~~-nl~i~~G~~~~i~G~~GsGKStLl~~ilG 645 (1458)
+++.+++.+. ....+.......|+++|++|+|+.. ...+.|+| ||++++|++++|+|++|||||||+++|+|
T Consensus 364 ~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~-----~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g 438 (1284)
T 3g5u_A 364 IIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSR-----KEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQR 438 (1284)
T ss_dssp TTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSST-----TSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTT
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-----CCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 9728986776665677777777718999989976999-----98710125458975998899989999979999999807
Q ss_pred CCCCCCCCEEEECCE-------------EEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 765899848998897-------------789817787888758899723977-897899999998100036886107986
Q 000504 646 EIPRISGAAIKVHGK-------------KAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDL 711 (1458)
Q Consensus 646 e~~~~~G~vi~~~g~-------------iayv~Q~~wi~~~TIreNIlfg~~-~~~~~y~~vi~~c~L~~di~~lp~Gd~ 711 (1458)
++++.+|++ .++|. ++||+|+||++++||+|||.||.+ .+.+++.++++.|++.++++.+|+|++
T Consensus 439 ~~~~~~G~i-~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~ 517 (1284)
T 3g5u_A 439 LYDPLDGMV-SIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFD 517 (1284)
T ss_dssp SSCCSEEEE-EETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGG
T ss_pred CCCCCCEEE-EECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCC
T ss_conf 889997389-9999987757999998654898688753776699997457989999999999998296999974656334
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHCCCCEEEE
Q ss_conf 30268998788689999999998713998999808777789656999999999887089679997056320101788999
Q 000504 712 SVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLV 791 (1458)
Q Consensus 712 t~ige~G~~LSGGQkqRi~LARAly~~~~i~lLDdp~salD~~~~~~if~~~i~~~l~~kTvIlvTH~~~~l~~~D~I~v 791 (1458)
|.+||+|.+|||||||||+||||+|++|+|++||||||+||++++..+ .+++....+++|+|+|||+++.+..||+|++
T Consensus 518 t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~i~~~d~i~v 596 (1284)
T 3g5u_A 518 TLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVV-QAALDKAREGRTTIVIAHRLSTVRNADVIAG 596 (1284)
T ss_dssp CCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHH-HHHHHHHHTTSEEEEECSCHHHHTTCSEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEECCHHHHHCCCEEEE
T ss_conf 501478786599999999999999529998999798777799999999-9999997399989999407789974998999
Q ss_pred EECCEEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCC----CCCCC-CCCCCCCC-CH-HHHCCCC---CCCCCCC
Q ss_conf 92986988036035664110699999998431026899998----78656-56766765-10-0000148---8887888
Q 000504 792 MKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQ----EDKCL-SRVPCQMS-QI-TEERFAR---PISCGEF 861 (1458)
Q Consensus 792 l~~G~i~~~G~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~-~~-~~~~~~~---~~~~~~~ 861 (1458)
|++|+|++.|+++|+++ .++.+.++............... ..... ...+.... .. ...+... .......
T Consensus 597 l~~G~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (1284)
T 3g5u_A 597 FDGGVIVEQGNHDELMR-EKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSICGPHDQD 675 (1284)
T ss_dssp CSSSCCCCEECHHHHHH-TTSHHHHHHHHTC-------------------------------------------------
T ss_pred EECCEEEEECCHHHHHH-CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98999999788999986-78779999997430022111333333222223443333333320003454333445642233
Q ss_pred CCCCCCCHH--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHCCCCC----CCCCCHHHH
Q ss_conf 988730000--017511788999999851347999999999999999732466788----6301123----355102678
Q 000504 862 SGRSQDEDT--ELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIA----WATDEKR----KVSREQLIG 931 (1458)
Q Consensus 862 ~~l~~~e~~--~~g~v~~~~y~~y~~~~~~~~l~~~~~l~~~~~~~~~~~s~~wl~----~~~~~~~----~~~~~~~i~ 931 (1458)
.....+|+. ......+..++.|.+..+.... +.+++.++..++.....+++. .+....+ ......+..
T Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 753 (1284)
T 3g5u_A 676 RKLSTKEALDEDVPPASFWRILKLNSTEWPYFV--VGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSL 753 (1284)
T ss_dssp --------CCCCCSCCCTTHHHHHHHHTCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 211024555313662589999998451579999--999999999999999999999999998556850336779999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999988789999999999999999999999999998877057622223--457034899983126587621699999999
Q 000504 932 VFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFD--STPSSRILNRCSTDQSTVDTDIPYRLAGLA 1009 (1458)
Q Consensus 932 ~y~~l~~~~~~~~~~r~~~~~~~~~~~s~~l~~~l~~~il~ap~~ffd--~tp~GrilnR~s~D~~~id~~i~~~l~~~~ 1009 (1458)
+|+++++...++.+.+.+.+...+.+...++|.+++++++++|++||| .+|+|+++||+++|+..++..++..+..++
T Consensus 754 ~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~ 833 (1284)
T 3g5u_A 754 LFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIF 833 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999983998887578998899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 99999999999999997689999999999999999999999999999984621117989999661159998615168999
Q 000504 1010 FALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFL 1089 (1458)
Q Consensus 1010 ~~~~~~~~~i~v~~~~~~~~~~v~i~~~~l~~~~~~~y~~~~r~l~r~~~~~~spi~~~~~Eti~G~~tIRaf~~e~~f~ 1089 (1458)
..++.+++.+++++.+.|.+.++++.++++.+.+..++.+..+...+......+....++.|++.|+.+||+|+.|+++.
T Consensus 834 ~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~ 913 (1284)
T 3g5u_A 834 QNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFE 913 (1284)
T ss_dssp HHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 99999999999999996999999999999999999999999999999999999999999999998899999846599999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH-HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999987779999867679999999999999---99999999-861278768889999999999999999999999
Q 000504 1090 LRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFA---FFLVLIIL-VTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWN 1165 (1458)
Q Consensus 1090 ~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~---~~~~~~~~-v~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~ 1165 (1458)
+++.+..+...+...... .|......+...+. ...+..+. ..+..+.++.+.......+..........+...
T Consensus 914 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1284)
T 3g5u_A 914 TMYAQSLQIPYRNAMKKA---HVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSF 990 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999---99999999999999999999999999999909806999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCC
Q ss_conf 9999996527999999735999886434789999999998627999446884799-895022116896189499998899
Q 000504 1166 LCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRT 1244 (1458)
Q Consensus 1166 ~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrT 1244 (1458)
..++.....+.+|+.++.+.+++.+...+ .+.+.++..|.|+++||+++|+.. ..++|+|+||++++||++||||||
T Consensus 991 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~s 1068 (1284)
T 3g5u_A 991 APDYAKATVSASHIIRIIEKTPEIDSYST--QGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSS 1068 (1284)
T ss_dssp SCCSTHHHHHHHHHHHHHHSCCSSSSCCS--SCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCC
T ss_conf 99999999999999999838876666555--6654567778579999899779999870020305997699889998899
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCC---CCCCHHHHHHHHHHC
Q ss_conf 99877999998216779973899969617999978874130898167777656577703869---999999999999984
Q 000504 1245 GSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL---EQHSDQEIWEVINKC 1321 (1458)
Q Consensus 1245 GSGKSTLi~~L~rl~ep~~G~I~IDG~dI~~i~l~~LRs~isiIpQdp~LF~gTIR~NLdp~---~~~sDeeI~~aL~~~ 1321 (1458)
|||||||+++|+|+++|++|+|.+||.|++.++++++|+++++|||||.+|++|||+|+.+. ...++++++++++++
T Consensus 1069 GsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~ 1148 (1284)
T 3g5u_A 1069 GCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEA 1148 (1284)
T ss_dssp STTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 99789999999468678997798999980007899997026898778740666699997466877899999999999983
Q ss_pred CCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 92899984001457534479998991599999999986059987998476779999989999999998649947899724
Q 000504 1322 HLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAH 1401 (1458)
Q Consensus 1322 ~L~~~i~~lp~gLdt~V~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAH 1401 (1458)
++++++.++|+||||.|+|+|.+||||||||+|||||++++|+||+||||||++|.+++..|++.|++..+++|+|+|||
T Consensus 1149 ~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~isH 1228 (1284)
T 3g5u_A 1149 NIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAH 1228 (1284)
T ss_dssp TCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEECS
T ss_pred CCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 95999972704245611788893389999999999999749999998687555799999999999998679998999955
Q ss_pred CHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHHHC
Q ss_conf 91234102989999498797845934786219984899999998403
Q 000504 1402 RIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFLRRT 1448 (1458)
Q Consensus 1402 Rl~ti~~~DrVlvL~~G~ivE~gsp~~Ll~~~~s~f~~l~~~~~~~~ 1448 (1458)
|++++.+||||+||++|+++|+|+|++|++ ++|.|++|++......
T Consensus 1229 ~l~~i~~~dri~vl~~G~i~~~g~~~~l~~-~~g~y~~l~~~q~~~~ 1274 (1284)
T 3g5u_A 1229 RLSTIQNADLIVVIQNGKVKEHGTHQQLLA-QKGIYFSMVSVQAGAK 1274 (1284)
T ss_dssp CTTGGGSCSEEEEEETBEEEEEECHHHHHH-SCSHHHHHHHHHC---
T ss_pred CHHHHHCCCEEEEEECCEEEEECCHHHHHH-CCCHHHHHHHHHHHCC
T ss_conf 879998099899998998999778999984-7777999999976132
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=759.09 Aligned_cols=515 Identities=20% Similarity=0.250 Sum_probs=454.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 26789999887899999999999999999999999999988770576222234570348999831265876216999999
Q 000504 928 QLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAG 1007 (1458)
Q Consensus 928 ~~i~~y~~l~~~~~~~~~~r~~~~~~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~ 1007 (1458)
.++..|++++++..++.+++.+++.+.+.+...+++.++++++++.|++|||++++|++++|+++|++.++..+...+..
T Consensus 137 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 137 NVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999997889899879984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99999999999999999976899999999999999999999999999999846211179899996611599986151689
Q 000504 1008 LAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENR 1087 (1458)
Q Consensus 1008 ~~~~~~~~~~~i~v~~~~~~~~~~v~i~~~~l~~~~~~~y~~~~r~l~r~~~~~~spi~~~~~Eti~G~~tIRaf~~e~~ 1087 (1458)
++..++.+++.+++++..+|.+.++++..+++..++..++.+..+...+......+...+++.|+++|+++||+|++|++
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 296 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRY 296 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999983999998214299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999877799998676799999999999999999999-98612787688899999999999999999999999
Q 000504 1088 FLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNL 1166 (1458)
Q Consensus 1088 f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~-~v~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~ 1166 (1458)
+.+++.+..+...+..........+......++..+....+.++ ...+..+.+++|.+..++.|...+...+..+...+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~ 376 (1321)
T 4f4c_A 297 ELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQL 376 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999599869999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECC-CCCCCEEEEEEEEECCCEEEEECCCC
Q ss_conf 99999652799999973599988643478999999999862799944688479-98950221168961894999988999
Q 000504 1167 CNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNP-TLPMVLKGITCTFPGEKKIGVVGRTG 1245 (1458)
Q Consensus 1167 ~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~-~~~~vLk~is~~i~~GekvgIVGrTG 1245 (1458)
..+.....+.+|+.++.+.+++.+.. ........+..|.|+|+||+|+|+. ...++|+|+||+|++||++||||+||
T Consensus 377 ~~~~~~~~s~~ri~~~l~~~~~~~~~--~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sG 454 (1321)
T 4f4c_A 377 AVLGTAQGAASGIYEVLDRKPVIDSS--SKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSG 454 (1321)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCSSCS--SSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCC
T ss_conf 99999999999999997178534566--6556567788876799985540799998743333188622882789980589
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCH
Q ss_conf 98779999982167799738999696179999788741308981677776565777038699-99999999999984928
Q 000504 1246 SGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLA 1324 (1458)
Q Consensus 1246 SGKSTLi~~L~rl~ep~~G~I~IDG~dI~~i~l~~LRs~isiIpQdp~LF~gTIR~NLdp~~-~~sDeeI~~aL~~~~L~ 1324 (1458)
||||||+++|+|+|+|++|+|.+||+||+++++++||++++||||||.||+||||+||.... +++|+++++|++.|+++
T Consensus 455 sGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~ 534 (1321)
T 4f4c_A 455 CGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAE 534 (1321)
T ss_dssp SCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCH
T ss_conf 85778888754565164486157996501125999850466658753320786167886415522099999999875654
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
Q ss_conf 99984001457534479998991599999999986059987998476779999989999999998649947899724912
Q 000504 1325 EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIP 1404 (1458)
Q Consensus 1325 ~~i~~lp~gLdt~V~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ 1404 (1458)
+++..+|+|+||.|||+|.+||||||||+|||||++++|+|++||||||++|++||..++++|++..+++|+|+||||++
T Consensus 535 ~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls 614 (1321)
T 4f4c_A 535 KFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLS 614 (1321)
T ss_dssp HHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTT
T ss_pred HHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 68870888886075589887777787999999987259998998455446887899999999999847988999736387
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 34102989999498797845934786219984899999998
Q 000504 1405 TVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1405 ti~~~DrVlvL~~G~ivE~gsp~~Ll~~~~s~f~~l~~~~~ 1445 (1458)
++.+||+|+||++|+|+|.|+|++|++ +++.|++|++...
T Consensus 615 ~i~~aD~Iivl~~G~ive~Gth~eL~~-~~g~y~~l~~~q~ 654 (1321)
T 4f4c_A 615 TIRNADLIISCKNGQVVEVGDHRALMA-QQGLYYDLVTAQT 654 (1321)
T ss_dssp TTTTCSEEEEEETTEEEEEECHHHHHT-TTCHHHHHHHHHH
T ss_pred HHHHCCEEEEEECCEEECCCCHHHHHH-HHHHHHHHHHHHH
T ss_conf 898689899963996513689999998-5327999999622
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=720.31 Aligned_cols=514 Identities=20% Similarity=0.258 Sum_probs=440.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 26789999887899999999999999999999999999988770576222234570348999831265876216999999
Q 000504 928 QLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAG 1007 (1458)
Q Consensus 928 ~~i~~y~~l~~~~~~~~~~r~~~~~~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~ 1007 (1458)
.+..+|++++++..++.+++.++....+.+...++|.+++++++++|++|||++++|+++||+++|++.++..++..+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~ 188 (1284)
T 3g5u_A 109 TYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGM 188 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998699899756887789999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99999999999999999976899999999999999999999999999999846211179899996611599986151689
Q 000504 1008 LAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENR 1087 (1458)
Q Consensus 1008 ~~~~~~~~~~~i~v~~~~~~~~~~v~i~~~~l~~~~~~~y~~~~r~l~r~~~~~~spi~~~~~Eti~G~~tIRaf~~e~~ 1087 (1458)
++..++.+++.+++++..+|.+.+++++++++++++..++.+..+...+......++..+++.|+++|+.+||+|++|++
T Consensus 189 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~ 268 (1284)
T 3g5u_A 189 FFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKK 268 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999978799998465399
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999877799998676799999999999999999999-98612787688899999999999999999999999
Q 000504 1088 FLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNL 1166 (1458)
Q Consensus 1088 f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~-~v~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~ 1166 (1458)
+.+++.+..+...+..........+......++..+....+.++ ...+..+.+++|.+..++.+.+.....+..+...+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 348 (1284)
T 3g5u_A 269 ELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNI 348 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999299889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCC
Q ss_conf 999996527999999735999886434789999999998627999446884799-8950221168961894999988999
Q 000504 1167 CNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTG 1245 (1458)
Q Consensus 1167 ~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTG 1245 (1458)
..+.....+++|+.++.+.++|.+...+...++ .+..|.|+++||+|+|+.. .+++|+|+||++++||++|||||||
T Consensus 349 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~--~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sG 426 (1284)
T 3g5u_A 349 EAFANARGAAYEVFKIIDNKPSIDSFSKSGHKP--DNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSG 426 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCC--TTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCC
T ss_conf 999999999999999972898677666567777--777771899998997699998710125458975998899989999
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHHHCCCH
Q ss_conf 9877999998216779973899969617999978874130898167777656577703869-999999999999984928
Q 000504 1246 SGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLA 1324 (1458)
Q Consensus 1246 SGKSTLi~~L~rl~ep~~G~I~IDG~dI~~i~l~~LRs~isiIpQdp~LF~gTIR~NLdp~-~~~sDeeI~~aL~~~~L~ 1324 (1458)
||||||+++|.|+++|++|+|.+||.|++.++++++|+++++|||||.+|++|||+|+.+. ...++++++++++.++++
T Consensus 427 sGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~ 506 (1284)
T 3g5u_A 427 CGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAY 506 (1284)
T ss_dssp SSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCH
T ss_conf 97999999980788999738999999877579999986548986887537766999974579899999999999982969
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
Q ss_conf 99984001457534479998991599999999986059987998476779999989999999998649947899724912
Q 000504 1325 EIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIP 1404 (1458)
Q Consensus 1325 ~~i~~lp~gLdt~V~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ 1404 (1458)
+++..+|+|+|+.++|+|.+||||||||+|||||++++|+||+||||||++|++|+..+++.+++..+++|+|+||||++
T Consensus 507 ~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~ 586 (1284)
T 3g5u_A 507 DFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLS 586 (1284)
T ss_dssp HHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf 99974656334501478786599999999999999529998999798777799999999999999739998999940778
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 3410298999949879784593478621998489999999
Q 000504 1405 TVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLVAEF 1444 (1458)
Q Consensus 1405 ti~~~DrVlvL~~G~ivE~gsp~~Ll~~~~s~f~~l~~~~ 1444 (1458)
++.+||+|+||++|+++|.|+|++|++ +++.|++++...
T Consensus 587 ~i~~~d~i~vl~~G~i~~~g~~~~l~~-~~~~~~~~~~~~ 625 (1284)
T 3g5u_A 587 TVRNADVIAGFDGGVIVEQGNHDELMR-EKGIYFKLVMTQ 625 (1284)
T ss_dssp HHTTCSEEEECSSSCCCCEECHHHHHH-TTSHHHHHHHHT
T ss_pred HHHCCCEEEEEECCEEEEECCHHHHHH-CCCHHHHHHHHH
T ss_conf 997499899998999999788999986-787799999974
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=691.70 Aligned_cols=561 Identities=23% Similarity=0.320 Sum_probs=478.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---CCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 889999998513479999999999999997324667886301123---355-1026789999887899999999999999
Q 000504 878 TVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKR---KVS-REQLIGVFIFLSGGSSFFILGRAVLLAT 953 (1458)
Q Consensus 878 ~~y~~y~~~~~~~~l~~~~~l~~~~~~~~~~~s~~wl~~~~~~~~---~~~-~~~~i~~y~~l~~~~~~~~~~r~~~~~~ 953 (1458)
..++.|++..+ ..+.+.+++.++..++.+..++++.+..+... ... ...++.+++++.+...++.+.+.++...
T Consensus 26 ~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (598)
T 3qf4_B 26 RRLLGYLRPHT--FTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLT 103 (598)
T ss_dssp HHHGGGTGGGH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999--9999999999999999999999999999999736888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999998877057622223457034899983126587621699999999999999999999999976899999
Q 000504 954 IAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLF 1033 (1458)
Q Consensus 954 ~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~~~~~~~~i~v~~~~~~~~~~v~ 1033 (1458)
.+.+...+++.++++++++.|++||+++++|+++||+++|++.++..+...+..++...+.+++.+++++.++|.+.+++
T Consensus 104 ~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~ 183 (598)
T 3qf4_B 104 LSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVT 183 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999779999976888899999999999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999984621117989999661159998615168999999999999877799998676799
Q 000504 1034 LVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWL 1113 (1458)
Q Consensus 1034 i~~~~l~~~~~~~y~~~~r~l~r~~~~~~spi~~~~~Eti~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1113 (1458)
+..+++++++..++.+..++..+......+...+++.|+++|+.+||+|++|+++.+++.+..+...+..........+.
T Consensus 184 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (598)
T 3qf4_B 184 LSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVL 263 (598)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999973799999748709999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 999999999999999999-9861278768889999999999999999999999999999652799999973599988643
Q 000504 1114 CLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLV 1192 (1458)
Q Consensus 1114 ~~rl~~l~~~~~~~~~~~-~v~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~ 1192 (1458)
....+++..+....+..+ ......+.+++|.+...+.|...+...+..+...+..++..+.+++|+.++.+.|+|.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~-- 341 (598)
T 3qf4_B 264 PPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKD-- 341 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--
T ss_conf 999999999999999999999998599789999999999999999999999999999999999999999976887777--
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
Q ss_conf 47899999999986279994468847998950221168961894999988999987799999821677997389996961
Q 000504 1193 IKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVD 1272 (1458)
Q Consensus 1193 ~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~L~rl~ep~~G~I~IDG~d 1272 (1458)
...+.+.++..|.|+++|++++|+++ +++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+||.|
T Consensus 342 --~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~ 418 (598)
T 3qf4_B 342 --DPDAVELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGID 418 (598)
T ss_dssp --CSSCCCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEE
T ss_pred --CCCCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEE
T ss_conf --77777777777718999989977999-860122279986998899989999969999999945857998089999998
Q ss_pred CCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 79999788741308981677776565777038699-99999999999984928999840014575344799989915999
Q 000504 1273 ISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQ 1351 (1458)
Q Consensus 1273 I~~i~l~~LRs~isiIpQdp~LF~gTIR~NLdp~~-~~sDeeI~~aL~~~~L~~~i~~lp~gLdt~V~e~G~nLS~GQrQ 1351 (1458)
+++++.+++|++++++||||.+|++|+|+|+.... ..++++++++++.+++++++..+|+|+|+.++|+|.+|||||||
T Consensus 419 i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Q 498 (598)
T 3qf4_B 419 IRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQ 498 (598)
T ss_dssp GGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHH
T ss_pred HHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHH
T ss_conf 30188999984108990798232463999974479999999999999996978889746453236422788987999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHH
Q ss_conf 99999986059987998476779999989999999998649947899724912341029899994987978459347862
Q 000504 1352 LVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLE 1431 (1458)
Q Consensus 1352 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrVlvL~~G~ivE~gsp~~Ll~ 1431 (1458)
|+|||||++++|+||+||||||++|++++..+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|++
T Consensus 499 rv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 578 (598)
T 3qf4_B 499 LLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQ 578 (598)
T ss_dssp HHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHH
T ss_conf 99999999649999999897667999999999999999808998999942778997199899998999998778999986
Q ss_pred CCCCHHHHHHHHHHH
Q ss_conf 199848999999984
Q 000504 1432 DNSSSFSKLVAEFLR 1446 (1458)
Q Consensus 1432 ~~~s~f~~l~~~~~~ 1446 (1458)
+++.|++++.+...
T Consensus 579 -~~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 579 -KRGFYYELFTSQYG 592 (598)
T ss_dssp -TTCHHHHHHHHHHG
T ss_pred -CCCHHHHHHHHHHH
T ss_conf -78779999999764
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=687.02 Aligned_cols=564 Identities=20% Similarity=0.279 Sum_probs=462.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCC---CHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 178899999985134799999999999999973246678863011233-551---0267899998878999999999999
Q 000504 876 KWTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRK-VSR---EQLIGVFIFLSGGSSFFILGRAVLL 951 (1458)
Q Consensus 876 ~~~~y~~y~~~~~~~~l~~~~~l~~~~~~~~~~~s~~wl~~~~~~~~~-~~~---~~~i~~y~~l~~~~~~~~~~r~~~~ 951 (1458)
.++.++.|++..++ .+.+.+++.++..++.+..+++++++.+.... .+. ..+...++++.+...++.+++.++.
T Consensus 10 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (587)
T 3qf4_A 10 GSKTLARYLKPYWI--FAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCTVFA 87 (587)
T ss_dssp CCCCGGGGTGGGHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 49999999999999--9999999999999999999999999999987369879999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999988770576222234570348999831265876216999999999999999999999999768999
Q 000504 952 ATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFP 1031 (1458)
Q Consensus 952 ~~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~~~~~~~~i~v~~~~~~~~~~ 1031 (1458)
...+.+...+++.++++++++.|+.||+++++|+++||+++|++.++..+...+..++...+.+++.+++++.++|.+.+
T Consensus 88 ~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 167 (587)
T 3qf4_A 88 SYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSS 167 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889799765888999999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999846211179899996611599986151689999999999998777999986767
Q 000504 1032 LFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTME 1111 (1458)
Q Consensus 1032 v~i~~~~l~~~~~~~y~~~~r~l~r~~~~~~spi~~~~~Eti~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1111 (1458)
+++..+++...+..++.+..+...+......+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+..........
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (587)
T 3qf4_A 168 VLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIV 247 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999855999998621499999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999999-98612787688899999999999999999999999999996527999999735999886
Q 000504 1112 WLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAP 1190 (1458)
Q Consensus 1112 wl~~rl~~l~~~~~~~~~~~-~v~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~ 1190 (1458)
+......++..+....+..+ ......+.++.|.....+.|...+...+..+...+..+.....+.+|+.++.+.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 327 (587)
T 3qf4_A 248 FALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIE 327 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998499389999999999999999999999999999999999999999976897657
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 43478999999999862799944688479989502211689618949999889999877999998216779973899969
Q 000504 1191 LVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDG 1270 (1458)
Q Consensus 1191 ~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~L~rl~ep~~G~I~IDG 1270 (1458)
. ...+.+.++..|.|+++|++++|+++.+++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+||
T Consensus 328 ~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g 404 (587)
T 3qf4_A 328 E---ADNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDE 404 (587)
T ss_dssp C---CTTCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESS
T ss_pred C---CCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 8---8776566888880799788998489997642111799869988999899999799999999278669986798999
Q ss_pred EECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 6179999788741308981677776565777038699-999999999999849289998400145753447999899159
Q 000504 1271 VDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE-QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1271 ~dI~~i~l~~LRs~isiIpQdp~LF~gTIR~NLdp~~-~~sDeeI~~aL~~~~L~~~i~~lp~gLdt~V~e~G~nLS~GQ 1349 (1458)
.|+++++.+++|++++++||||.+|++|+|+|+.... ..++++++++++.+++++++..+|+|+|+.++++|.+|||||
T Consensus 405 ~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGq 484 (587)
T 3qf4_A 405 LDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQ 484 (587)
T ss_dssp SBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHH
T ss_pred EECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHH
T ss_conf 98340789999841389778986767559999852488999999999999968499997565312127518989929999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999860599879984767799999899999999986499478997249123410298999949879784593478
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1350 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrVlvL~~G~ivE~gsp~~L 1429 (1458)
|||+|||||++++|+||+||||||++|++++..|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 485 rQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el 564 (587)
T 3qf4_A 485 KQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKEL 564 (587)
T ss_dssp HHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997299999997975447999999999999986799989998227688981998999989989997889999
Q ss_pred HHCCCCHHHHHHHHHH
Q ss_conf 6219984899999998
Q 000504 1430 LEDNSSSFSKLVAEFL 1445 (1458)
Q Consensus 1430 l~~~~s~f~~l~~~~~ 1445 (1458)
+++ ++.|++++++..
T Consensus 565 ~~~-~~~~~~~~~~~~ 579 (587)
T 3qf4_A 565 LEH-CKPYREIYESQF 579 (587)
T ss_dssp HHH-CHHHHHHHHHHC
T ss_pred HHC-CCHHHHHHHHHH
T ss_conf 867-839999999984
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=668.30 Aligned_cols=558 Identities=19% Similarity=0.264 Sum_probs=456.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCC---CC-----CHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999851347999999999999999732466788630112---335---51-----026789999887899999999
Q 000504 879 VYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEK---RKV---SR-----EQLIGVFIFLSGGSSFFILGR 947 (1458)
Q Consensus 879 ~y~~y~~~~~~~~l~~~~~l~~~~~~~~~~~s~~wl~~~~~~~---~~~---~~-----~~~i~~y~~l~~~~~~~~~~r 947 (1458)
.++.|++...+.. .+.+++.++..++.+..++.+.+..+.. ... .. ..+...+.++.+...++.+.+
T Consensus 4 ~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (578)
T 4a82_A 4 RYLQFVKPYKYRI--FATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIR 81 (578)
T ss_dssp HHHHHHGGGHHHH--HHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999988999999--99999999999999999999999999998168711467788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998877057622223457034899983126587621699999999999999999999999976
Q 000504 948 AVLLATIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAW 1027 (1458)
Q Consensus 948 ~~~~~~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~~~~~~~~i~v~~~~~~ 1027 (1458)
.+.....+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.+++++..+|
T Consensus 82 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 161 (578)
T 4a82_A 82 QYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDV 161 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999878999976898699999999999999999999999999999999999999999969
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999999984621117989999661159998615168999999999999877799998
Q 000504 1028 QVFPLFLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNC 1107 (1458)
Q Consensus 1028 ~~~~v~i~~~~l~~~~~~~y~~~~r~l~r~~~~~~spi~~~~~Eti~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~ 1107 (1458)
.+.++.+..+++++.+..++.+..++..+......+...+++.|+++|+.+||+|++|+.+.+++.+..+...+......
T Consensus 162 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 241 (578)
T 4a82_A 162 KLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHT 241 (578)
T ss_dssp TTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999982499999816649999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 676799999999999999999999-9861278768889999999999999999999999999999652799999973599
Q 000504 1108 GTMEWLCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIP 1186 (1458)
Q Consensus 1108 ~~~~wl~~rl~~l~~~~~~~~~~~-~v~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~ 1186 (1458)
....+......++..+....+..+ ......+.+++|.+..++.|...+...+..+...+..+.....+.+|+.++.+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~ 321 (578)
T 4a82_A 242 RWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDED 321 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999859958999999999999999999999999999999999999999997689
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 98864347899999999986279994468847998950221168961894999988999987799999821677997389
Q 000504 1187 SEAPLVIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRI 1266 (1458)
Q Consensus 1187 ~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~L~rl~ep~~G~I 1266 (1458)
+|.+. ...+.+.++..|.|+++|++++|+++.+++|+|+||++++||++|||||||||||||+++|.|+++|++|+|
T Consensus 322 ~~~~~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 398 (578)
T 4a82_A 322 YDIKN---GVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQI 398 (578)
T ss_dssp CSSCC---CTTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEE
T ss_pred CCCCC---CCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 76667---877666677788079999999758999741343379987999999989999859999999846788999679
Q ss_pred EECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 9969617999978874130898167777656577703869-999999999999984928999840014575344799989
Q 000504 1267 LIDGVDISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPL-EQHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENW 1345 (1458)
Q Consensus 1267 ~IDG~dI~~i~l~~LRs~isiIpQdp~LF~gTIR~NLdp~-~~~sDeeI~~aL~~~~L~~~i~~lp~gLdt~V~e~G~nL 1345 (1458)
.+||.|+++++.+++|++++++||+|.+|++|+|+|+... ...++++++++++.+++++++..+|+|+|+.++++|.+|
T Consensus 399 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~L 478 (578)
T 4a82_A 399 LIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKL 478 (578)
T ss_dssp EETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTS
T ss_pred EECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCC
T ss_conf 99999844278999960068992898347645999985279998899999999880959999757330102530688967
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
Q ss_conf 91599999999986059987998476779999989999999998649947899724912341029899994987978459
Q 000504 1346 SVGQRQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDS 1425 (1458)
Q Consensus 1346 S~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrVlvL~~G~ivE~gs 1425 (1458)
|||||||++||||++++|+|++||||||++|++++..+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+
T Consensus 479 SgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 558 (578)
T 4a82_A 479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGT 558 (578)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 99999999999999749999999786545799999999999999808997999831789997199899998998999888
Q ss_pred HHHHHHCCCCHHHHHHH
Q ss_conf 34786219984899999
Q 000504 1426 PRQLLEDNSSSFSKLVA 1442 (1458)
Q Consensus 1426 p~~Ll~~~~s~f~~l~~ 1442 (1458)
|++|++ +++.|+++++
T Consensus 559 ~~el~~-~~~~~~~~~~ 574 (578)
T 4a82_A 559 HRELIA-KQGAYEHLYS 574 (578)
T ss_dssp HHHHHH-TTSHHHHHHT
T ss_pred HHHHHH-CCCHHHHHHH
T ss_conf 999985-8838999998
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=664.26 Aligned_cols=560 Identities=20% Similarity=0.240 Sum_probs=475.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCC--CHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78899999985134799999999999999973246678863011233-551--0267-8999988789999999999999
Q 000504 877 WTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKRK-VSR--EQLI-GVFIFLSGGSSFFILGRAVLLA 952 (1458)
Q Consensus 877 ~~~y~~y~~~~~~~~l~~~~~l~~~~~~~~~~~s~~wl~~~~~~~~~-~~~--~~~i-~~y~~l~~~~~~~~~~r~~~~~ 952 (1458)
++.++.|++..++ .+.+.+++.++..++....++++.++.+.... .+. ..++ ..++++.+...++.+.+.+...
T Consensus 13 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b60_A 13 FRRLWPTIAPFKA--GLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCIS 90 (582)
T ss_dssp HHHHHHHHGGGHH--HHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999--99999999999999999999999999998843686579999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999887705762222345703489998312658762169999999999999999999999997689999
Q 000504 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1458)
Q Consensus 953 ~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~~~~~~~~i~v~~~~~~~~~~v 1032 (1458)
..+.+....++.++++++++.|++||+++++|++++|+++|++.++..+...+..++..++.+++.+++++.++|.+.++
T Consensus 91 ~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b60_A 91 WVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSII 170 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999980999997889865899999987999999999999999999999999999999980999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998462111798999966115999861516899999999999987779999867679
Q 000504 1033 FLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEW 1112 (1458)
Q Consensus 1033 ~i~~~~l~~~~~~~y~~~~r~l~r~~~~~~spi~~~~~Eti~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1112 (1458)
++..+++++++..++.+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..........|
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3b60_A 171 LVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSI 250 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999619999983768999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999999999999-86127876888999999999999999999999999999965279999997359998864
Q 000504 1113 LCLRINLLFNFAFFLVLIIL-VTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPL 1191 (1458)
Q Consensus 1113 l~~rl~~l~~~~~~~~~~~~-v~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1191 (1458)
.....+++..+....+.++. ..+..+.+++|.....+.|...+...+..+...+.++.....+.+|+.++.+.|+|.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 330 (582)
T 3b60_A 251 SDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDE 330 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984999899999999999999999999999999999999999999999759987667
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 34789999999998627999446884799895022116896189499998899998779999982167799738999696
Q 000504 1192 VIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGV 1271 (1458)
Q Consensus 1192 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~L~rl~ep~~G~I~IDG~ 1271 (1458)
. +.+.++..+.|+++|++++|+++.+++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.
T Consensus 331 ---~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b60_A 331 ---G--KRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGH 405 (582)
T ss_dssp ---C--CBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTE
T ss_pred ---C--CCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCE
T ss_conf ---7--77777888847999889973999974415615997699989998999998999999986106898976979999
Q ss_pred ECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 179999788741308981677776565777038699--999999999999849289998400145753447999899159
Q 000504 1272 DISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE--QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1272 dI~~i~l~~LRs~isiIpQdp~LF~gTIR~NLdp~~--~~sDeeI~~aL~~~~L~~~i~~lp~gLdt~V~e~G~nLS~GQ 1349 (1458)
|+++++.+++|++++++||+|.+|++|+|+|+.... +.++++++++++.+++++++..+|+|+|+.++++|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq 485 (582)
T 3b60_A 406 DLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQ 485 (582)
T ss_dssp ETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHH
T ss_pred ECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 82306999999608088068747787899998545999989999999999849799998450411451147988789999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999860599879984767799999899999999986499478997249123410298999949879784593478
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1350 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrVlvL~~G~ivE~gsp~~L 1429 (1458)
|||++||||++++|+|++||||||++|++++..+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 486 ~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b60_A 486 RQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSEL 565 (582)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997289989997865557989999999999999679979999454778985998999978889884589999
Q ss_pred HHCCCCHHHHHHHHH
Q ss_conf 621998489999999
Q 000504 1430 LEDNSSSFSKLVAEF 1444 (1458)
Q Consensus 1430 l~~~~s~f~~l~~~~ 1444 (1458)
+++ ++.|+++++..
T Consensus 566 ~~~-~~~~~~~~~~q 579 (582)
T 3b60_A 566 LAQ-HGVYAQLHKMQ 579 (582)
T ss_dssp HHH-TSSHHHHHHHT
T ss_pred HHC-CCHHHHHHHHH
T ss_conf 876-98899999975
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=662.73 Aligned_cols=560 Identities=20% Similarity=0.304 Sum_probs=474.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7889999998513479999999999999997324667886301123---35510267-8999988789999999999999
Q 000504 877 WTVYSAFITLVYKGALVPVILLCQVLFQALQMGSNYWIAWATDEKR---KVSREQLI-GVFIFLSGGSSFFILGRAVLLA 952 (1458)
Q Consensus 877 ~~~y~~y~~~~~~~~l~~~~~l~~~~~~~~~~~s~~wl~~~~~~~~---~~~~~~~i-~~y~~l~~~~~~~~~~r~~~~~ 952 (1458)
++.++.|++..++. +.+.+++.++..++....++++.+..+... ......++ ..++++.+...++.+.+.+...
T Consensus 13 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b5x_A 13 FKRLWTYIRLYKAG--LVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLS 90 (582)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998899999--9999999999999999999999999999864686679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999887705762222345703489998312658762169999999999999999999999997689999
Q 000504 953 TIAIKTAQRLFLNMITSVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPL 1032 (1458)
Q Consensus 953 ~~~~~~s~~l~~~l~~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~~~~~~~~i~v~~~~~~~~~~v 1032 (1458)
..+.+....++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.+++++.++|.+.++
T Consensus 91 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b5x_A 91 WVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLV 170 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999986999997789878999999988999999999999999999999999999999982999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998462111798999966115999861516899999999999987779999867679
Q 000504 1033 FLVILGISIWYQAYYITTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEW 1112 (1458)
Q Consensus 1033 ~i~~~~l~~~~~~~y~~~~r~l~r~~~~~~spi~~~~~Eti~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1112 (1458)
++..+++++++..++.+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..........|
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3b5x_A 171 LIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSI 250 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999519999970875999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9999999999999999999-986127876888999999999999999999999999999965279999997359998864
Q 000504 1113 LCLRINLLFNFAFFLVLII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPL 1191 (1458)
Q Consensus 1113 l~~rl~~l~~~~~~~~~~~-~v~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1191 (1458)
.....+++..+....+.++ ...+..+.+++|.....+.|...+...+..+...+.++.....+.+|+.++.+.|+|.+
T Consensus 251 ~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~- 329 (582)
T 3b5x_A 251 ADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERD- 329 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-
T ss_conf 9999999999999999999999998599889999999999999999999999999999999999999999975897677-
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 34789999999998627999446884799895022116896189499998899998779999982167799738999696
Q 000504 1192 VIKNSRPSPEWPSSGKIELENLLVQYNPTLPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGV 1271 (1458)
Q Consensus 1192 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~L~rl~ep~~G~I~IDG~ 1271 (1458)
+.. .+.++..+.|+++|++++|+++.+++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+||.
T Consensus 330 --~~~--~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b5x_A 330 --NGK--YEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGH 405 (582)
T ss_pred --CCC--CCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf --777--7777788828999989972899865400416998799989998999997999999996577899987989999
Q ss_pred ECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 179999788741308981677776565777038699--999999999999849289998400145753447999899159
Q 000504 1272 DISMIGLQDLRSRLSIIPQDPMLFQGTVRTNLDPLE--QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQ 1349 (1458)
Q Consensus 1272 dI~~i~l~~LRs~isiIpQdp~LF~gTIR~NLdp~~--~~sDeeI~~aL~~~~L~~~i~~lp~gLdt~V~e~G~nLS~GQ 1349 (1458)
|+.+++.+++|++++++||+|.+|++|+|+|+.... +.++++++++++.+++++++..+|+|+|+.++++|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq 485 (582)
T 3b5x_A 406 DVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQ 485 (582)
T ss_pred EHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHH
T ss_conf 85638899996485898279905310299998566889999999999999879899998476533451068888479999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999860599879984767799999899999999986499478997249123410298999949879784593478
Q 000504 1350 RQLVCLARVLLKKKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQL 1429 (1458)
Q Consensus 1350 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrVlvL~~G~ivE~gsp~~L 1429 (1458)
|||++||||++++|+|++||||||++|++++..+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 486 ~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b5x_A 486 RQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADL 565 (582)
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997499999997854468999999999999997289989999368899981998999989989997789999
Q ss_pred HHCCCCHHHHHHHHH
Q ss_conf 621998489999999
Q 000504 1430 LEDNSSSFSKLVAEF 1444 (1458)
Q Consensus 1430 l~~~~s~f~~l~~~~ 1444 (1458)
++ .++.|+++++..
T Consensus 566 ~~-~~~~~~~~~~~q 579 (582)
T 3b5x_A 566 LA-QDGAYAQLHRIQ 579 (582)
T ss_pred HH-CCCHHHHHHHHH
T ss_conf 84-885899999986
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=657.62 Aligned_cols=547 Identities=21% Similarity=0.268 Sum_probs=460.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCC--C-CC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999997324667886301123--3-55----1026789999887899999999999999999999999999988
Q 000504 896 ILLCQVLFQALQMGSNYWIAWATDEKR--K-VS----REQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMIT 968 (1458)
Q Consensus 896 ~~l~~~~~~~~~~~s~~wl~~~~~~~~--~-~~----~~~~i~~y~~l~~~~~~~~~~r~~~~~~~~~~~s~~l~~~l~~ 968 (1458)
.+++.++..++....++++.+..+... . .. ...++..++++.+...++.+.+.+.....+.+...+++.++++
T Consensus 24 ~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~ 103 (595)
T 2yl4_A 24 AVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQRIVNRLRTSLFS 103 (595)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999735740266799999999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77057622223457034899983126587621699999999999999999999999976899999999999999999999
Q 000504 969 SVFRAPISFFDSTPSSRILNRCSTDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQAYYI 1048 (1458)
Q Consensus 969 ~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~~~~~~~~i~v~~~~~~~~~~v~i~~~~l~~~~~~~y~ 1048 (1458)
++++.|++||+++++|++++|+++|++.++..+...+..++..++.+++.+++++.++|.+.++++..+++.+.+..++.
T Consensus 104 ~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~ 183 (595)
T 2yl4_A 104 SILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVLSVVPPVSIIAVIYG 183 (595)
T ss_dssp HHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99819999977798488999999999999999999999999999999999999999819999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999984621117989999661159998615168999999999999877799998676799999999999999999
Q 000504 1049 TTARELARMVGTRKAPILHHFSESIAGATTIRCFNQENRFLLRSHSLIDDYSCVTFHNCGTMEWLCLRINLLFNFAFFLV 1128 (1458)
Q Consensus 1049 ~~~r~l~r~~~~~~spi~~~~~Eti~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~ 1128 (1458)
+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..........|......++..+....+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (595)
T 2yl4_A 184 RYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGATGLSGNLIVLSV 263 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999981199999837569999999999999999999999999999999999999999999
Q ss_pred HHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999-9861278768889999999999999999999999999999652799999973599988643478999999999862
Q 000504 1129 LII-LVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIKNSRPSPEWPSSGK 1207 (1458)
Q Consensus 1129 ~~~-~v~~~~~~~~~~~~gl~lsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~ 1207 (1458)
.++ ...+..+.+++|.....+.|...+...+..+...+.++.....+.+|+.++.+.|+|.+.. ...+ +..+..|.
T Consensus 264 ~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~--~~~~-~~~~~~~~ 340 (595)
T 2yl4_A 264 LYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPFN--EGVI-LNEKSFQG 340 (595)
T ss_dssp HHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCSS--CSBC-CCTTTCCC
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCC-CCCCCCCC
T ss_conf 99999999869978999999999999999999999999999999999999999998389766777--7877-77678998
Q ss_pred -EEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCE
Q ss_conf -7999446884799-89502211689618949999889999877999998216779973899969617999978874130
Q 000504 1208 -IELENLLVQYNPT-LPMVLKGITCTFPGEKKIGVVGRTGSGKSTLIQALFRVVEPSGGRILIDGVDISMIGLQDLRSRL 1285 (1458)
Q Consensus 1208 -I~~~nvs~~Y~~~-~~~vLk~is~~i~~GekvgIVGrTGSGKSTLi~~L~rl~ep~~G~I~IDG~dI~~i~l~~LRs~i 1285 (1458)
|+++|++++|+.. ..++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+||.|+++++.+++|+++
T Consensus 341 ~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i 420 (595)
T 2yl4_A 341 ALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKI 420 (595)
T ss_dssp CEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEETTEETTTBCHHHHHHSE
T ss_pred EEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHCE
T ss_conf 38999889985899888120112799849988999899999799999998258578983799999981117999997322
Q ss_pred EEECCCCCCCCCCHHHHCCCCC----CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 8981677776565777038699----999999999999849289998400145753447999899159999999998605
Q 000504 1286 SIIPQDPMLFQGTVRTNLDPLE----QHSDQEIWEVINKCHLAEIVRQDQRLLDAPVAEDGENWSVGQRQLVCLARVLLK 1361 (1458)
Q Consensus 1286 siIpQdp~LF~gTIR~NLdp~~----~~sDeeI~~aL~~~~L~~~i~~lp~gLdt~V~e~G~nLS~GQrQll~LARALLr 1361 (1458)
+++||+|.+|++|+++|+.... ..++++++++++.+++++++.++|+|+|+.++++|.+||||||||++||||+++
T Consensus 421 ~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~LSgGq~qrv~iAral~~ 500 (595)
T 2yl4_A 421 GTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLK 500 (595)
T ss_dssp EEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCCCCHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 89836883268779999840587766568999999999869799997473201350168878689999999999999975
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHH
Q ss_conf 99879984767799999899999999986499478997249123410298999949879784593478621998489999
Q 000504 1362 KKRILVLDEATASIDTATDNVIQQTIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVLEYDSPRQLLEDNSSSFSKLV 1441 (1458)
Q Consensus 1362 ~~~ILiLDEaTsslD~~Td~~Iq~~I~~~~~~~TVI~IAHRl~ti~~~DrVlvL~~G~ivE~gsp~~Ll~~~~s~f~~l~ 1441 (1458)
+|+|++||||||++|++++..+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|++++++.|++++
T Consensus 501 ~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 580 (595)
T 2yl4_A 501 NPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEELLSKPNGIYRKLM 580 (595)
T ss_dssp CCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEECSCC------C------
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHH
T ss_conf 99999998866689989999999999999659979999468789975998999989989997889999747872999999
Q ss_pred HHHH
Q ss_conf 9998
Q 000504 1442 AEFL 1445 (1458)
Q Consensus 1442 ~~~~ 1445 (1458)
+...
T Consensus 581 ~~q~ 584 (595)
T 2yl4_A 581 NKQS 584 (595)
T ss_dssp ----
T ss_pred HHHH
T ss_conf 9743
Done!