Query 000506
Match_columns 1458
No_of_seqs 893 out of 6050
Neff 7.5
Searched_HMMs 46136
Date Mon Apr 1 17:10:06 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000506.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000506hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 1E-255 3E-260 2360.8 97.8 1348 50-1458 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 3E-238 7E-243 2369.5 146.9 1417 39-1458 23-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 1E-187 2E-192 1890.0 137.5 1289 112-1453 3-1389(1394)
4 PLN03211 ABC transporter G-25; 100.0 8.9E-95 1.9E-99 918.5 65.5 585 852-1455 36-659 (659)
5 KOG0061 Transporter, ABC super 100.0 3.3E-95 7E-100 912.7 60.2 581 852-1457 22-611 (613)
6 TIGR00955 3a01204 The Eye Pigm 100.0 2.4E-94 5.1E-99 916.8 63.2 569 879-1458 36-617 (617)
7 TIGR00956 3a01205 Pleiotropic 100.0 6.4E-92 1.4E-96 954.7 64.6 566 879-1455 72-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 1.4E-90 3E-95 936.3 62.8 567 879-1455 176-790 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 4E-84 8.7E-89 813.7 42.3 568 879-1456 126-732 (1391)
10 TIGR00955 3a01204 The Eye Pigm 100.0 4.3E-80 9.3E-85 786.1 59.4 572 180-795 35-612 (617)
11 KOG0061 Transporter, ABC super 100.0 7.6E-80 1.7E-84 773.8 57.2 584 132-796 21-608 (613)
12 PLN03211 ABC transporter G-25; 100.0 2.4E-78 5.1E-83 768.4 64.0 607 132-796 35-658 (659)
13 KOG0055 Multidrug/pheromone ex 100.0 1.5E-72 3.3E-77 712.1 66.8 767 176-1093 359-1208(1228)
14 TIGR01257 rim_protein retinal- 100.0 1.1E-70 2.3E-75 741.1 73.1 223 855-1104 1937-2161(2272)
15 KOG0054 Multidrug resistance-a 100.0 1.9E-67 4.1E-72 682.4 51.9 747 182-1093 533-1357(1381)
16 COG1123 ATPase components of v 100.0 5.7E-66 1.2E-70 615.1 51.6 474 183-1093 22-514 (539)
17 PLN03130 ABC transporter C fam 100.0 1.1E-65 2.3E-70 705.0 55.6 211 855-1094 1237-1457(1622)
18 PRK13549 xylose transporter AT 100.0 3.9E-65 8.4E-70 638.1 50.7 459 182-1095 17-491 (506)
19 PLN03232 ABC transporter C fam 100.0 1.1E-64 2.3E-69 696.0 55.3 210 855-1093 1234-1453(1495)
20 PRK09700 D-allose transporter 100.0 7.5E-65 1.6E-69 636.6 49.0 459 182-1093 17-493 (510)
21 PRK10762 D-ribose transporter 100.0 1.2E-64 2.7E-69 632.8 49.6 450 183-1095 17-481 (501)
22 PTZ00265 multidrug resistance 100.0 4.5E-64 9.8E-69 682.8 58.0 216 855-1093 1165-1447(1466)
23 PRK10261 glutathione transport 100.0 1.4E-63 3E-68 635.5 53.8 488 183-1094 29-549 (623)
24 PRK15439 autoinducer 2 ABC tra 100.0 6.7E-64 1.5E-68 626.5 49.8 454 182-1094 23-488 (510)
25 TIGR02633 xylG D-xylose ABC tr 100.0 1.2E-63 2.7E-68 624.5 50.5 461 182-1094 13-488 (500)
26 PRK15134 microcin C ABC transp 100.0 2.2E-63 4.9E-68 625.5 50.6 464 183-1093 22-510 (529)
27 TIGR03269 met_CoM_red_A2 methy 100.0 1.9E-63 4.1E-68 625.3 49.3 446 182-1093 12-512 (520)
28 PRK11288 araG L-arabinose tran 100.0 2.5E-63 5.4E-68 621.1 49.3 451 183-1095 17-482 (501)
29 TIGR00957 MRP_assoc_pro multi 100.0 2.2E-62 4.8E-67 674.0 60.8 210 855-1093 1284-1503(1522)
30 PRK10982 galactose/methyl gala 100.0 1.6E-62 3.5E-67 612.7 48.5 451 182-1094 10-476 (491)
31 PTZ00243 ABC transporter; Prov 100.0 2.2E-60 4.7E-65 652.1 62.3 210 855-1093 1308-1528(1560)
32 TIGR01271 CFTR_protein cystic 100.0 1.2E-60 2.7E-65 654.7 58.8 209 855-1093 1217-1435(1490)
33 PRK10938 putative molybdenum t 100.0 3.1E-61 6.6E-66 601.5 43.1 447 183-1090 16-484 (490)
34 COG4172 ABC-type uncharacteriz 100.0 8.9E-59 1.9E-63 518.1 45.5 470 181-1093 21-511 (534)
35 PRK11819 putative ABC transpor 100.0 1.8E-58 3.9E-63 582.9 51.5 201 855-1092 324-527 (556)
36 PRK15064 ABC transporter ATP-b 100.0 1.8E-58 4E-63 581.1 47.9 198 855-1093 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 4.5E-58 9.7E-63 579.4 50.8 201 855-1092 322-525 (552)
38 PRK10636 putative ABC transpor 100.0 2.5E-55 5.4E-60 559.9 52.0 197 855-1093 312-512 (638)
39 PRK13409 putative ATPase RIL; 100.0 4E-56 8.7E-61 558.7 42.3 213 855-1110 340-556 (590)
40 PRK11147 ABC transporter ATPas 100.0 2.1E-55 4.6E-60 562.2 49.7 202 855-1093 319-523 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 1.2E-54 2.6E-59 515.3 47.0 455 174-1090 12-482 (500)
42 PLN03073 ABC transporter F fam 100.0 1E-51 2.2E-56 527.1 54.0 200 855-1093 508-709 (718)
43 COG0488 Uup ATPase components 100.0 9E-52 1.9E-56 505.2 44.0 223 179-431 12-239 (530)
44 COG3845 ABC-type uncharacteriz 100.0 1.4E-50 3E-55 468.9 43.5 462 177-1095 11-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 4.7E-45 1E-49 382.2 23.3 214 856-1093 3-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 3E-44 6.5E-49 376.2 20.3 227 176-453 8-238 (240)
47 KOG0927 Predicted transporter 100.0 2E-41 4.4E-46 392.8 31.4 202 854-1093 388-591 (614)
48 COG1127 Ttg2A ABC-type transpo 100.0 3.2E-42 6.8E-47 366.4 21.8 231 855-1109 8-250 (263)
49 COG1135 AbcC ABC-type metal io 100.0 2.3E-42 4.9E-47 379.5 21.0 219 856-1094 2-227 (339)
50 COG1131 CcmA ABC-type multidru 100.0 5.6E-42 1.2E-46 396.6 25.4 224 855-1106 4-230 (293)
51 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7.7E-42 1.7E-46 375.9 24.7 218 855-1095 4-224 (254)
52 COG1120 FepC ABC-type cobalami 100.0 5.8E-42 1.3E-46 379.1 22.2 228 855-1104 2-236 (258)
53 TIGR01257 rim_protein retinal- 100.0 8.5E-37 1.8E-41 413.6 71.6 216 854-1093 927-1144(2272)
54 COG1125 OpuBA ABC-type proline 100.0 1.2E-41 2.6E-46 362.4 19.3 213 856-1093 2-220 (309)
55 COG1116 TauB ABC-type nitrate/ 100.0 2.8E-41 6.1E-46 365.7 22.1 204 855-1084 3-207 (248)
56 COG3839 MalK ABC-type sugar tr 100.0 2.3E-41 4.9E-46 388.1 21.8 223 179-452 12-235 (338)
57 COG1136 SalX ABC-type antimicr 100.0 6E-41 1.3E-45 364.0 23.7 208 857-1085 3-219 (226)
58 COG3638 ABC-type phosphate/pho 100.0 2E-41 4.3E-46 359.4 19.5 220 855-1095 3-234 (258)
59 COG1125 OpuBA ABC-type proline 100.0 3E-41 6.4E-46 359.4 20.7 213 177-432 8-225 (309)
60 COG3842 PotA ABC-type spermidi 100.0 2.1E-41 4.7E-46 390.3 20.3 228 177-454 12-240 (352)
61 COG1135 AbcC ABC-type metal io 100.0 4.1E-41 8.9E-46 369.6 21.4 225 181-456 17-247 (339)
62 COG4555 NatA ABC-type Na+ tran 100.0 1.4E-41 3E-46 350.2 16.3 202 881-1094 15-218 (245)
63 COG1118 CysA ABC-type sulfate/ 100.0 4.9E-41 1.1E-45 367.8 19.0 206 879-1094 13-223 (345)
64 COG1118 CysA ABC-type sulfate/ 100.0 6.3E-41 1.4E-45 367.0 19.7 225 180-453 12-240 (345)
65 COG1131 CcmA ABC-type multidru 100.0 1.9E-40 4.2E-45 383.7 24.7 218 176-436 10-230 (293)
66 COG1127 Ttg2A ABC-type transpo 100.0 1.6E-40 3.4E-45 353.5 20.4 214 177-432 15-235 (263)
67 COG1120 FepC ABC-type cobalami 100.0 1.1E-40 2.3E-45 369.0 17.7 213 180-432 12-228 (258)
68 COG3839 MalK ABC-type sugar tr 100.0 3.6E-40 7.8E-45 378.3 21.8 215 855-1094 3-219 (338)
69 COG2884 FtsE Predicted ATPase 100.0 4.7E-40 1E-44 336.6 19.9 213 856-1092 2-220 (223)
70 COG1116 TauB ABC-type nitrate/ 100.0 5.8E-40 1.3E-44 355.6 20.8 196 181-421 14-211 (248)
71 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.1E-39 2.5E-44 358.8 21.2 207 184-432 18-227 (254)
72 COG3842 PotA ABC-type spermidi 100.0 7E-40 1.5E-44 377.8 20.2 216 855-1094 5-222 (352)
73 COG3638 ABC-type phosphate/pho 100.0 1.2E-39 2.5E-44 346.0 19.3 217 181-432 15-237 (258)
74 COG1117 PstB ABC-type phosphat 100.0 1.8E-39 3.8E-44 338.2 19.9 217 855-1093 7-232 (253)
75 PRK13537 nodulation ABC transp 100.0 6.7E-39 1.5E-43 374.5 26.9 214 855-1093 7-222 (306)
76 COG4555 NatA ABC-type Na+ tran 100.0 1.7E-39 3.8E-44 334.8 17.0 207 182-432 14-222 (245)
77 COG1117 PstB ABC-type phosphat 100.0 2.6E-39 5.5E-44 336.9 17.4 223 181-451 18-248 (253)
78 TIGR02314 ABC_MetN D-methionin 100.0 2.5E-38 5.4E-43 372.4 26.7 217 856-1093 2-225 (343)
79 COG1136 SalX ABC-type antimicr 100.0 2.2E-38 4.8E-43 344.0 23.4 195 183-421 18-220 (226)
80 cd03261 ABC_Org_Solvent_Resist 100.0 3.6E-38 7.7E-43 356.4 25.2 213 857-1093 2-221 (235)
81 COG1137 YhbG ABC-type (unclass 100.0 3.4E-39 7.3E-44 332.3 14.3 207 878-1094 14-224 (243)
82 PRK11650 ugpC glycerol-3-phosp 100.0 4.7E-38 1E-42 373.2 26.1 216 855-1094 3-220 (356)
83 TIGR03265 PhnT2 putative 2-ami 100.0 4.7E-38 1E-42 372.8 26.0 215 855-1094 4-220 (353)
84 PRK11432 fbpC ferric transport 100.0 8.6E-38 1.9E-42 369.9 26.9 215 855-1094 6-222 (351)
85 PRK11650 ugpC glycerol-3-phosp 100.0 5.3E-38 1.2E-42 372.8 24.5 207 182-431 16-223 (356)
86 PRK13536 nodulation factor exp 100.0 1.2E-37 2.6E-42 367.5 27.2 215 854-1093 40-256 (340)
87 TIGR03258 PhnT 2-aminoethylpho 100.0 1E-37 2.2E-42 370.4 26.5 215 855-1094 5-224 (362)
88 PRK11432 fbpC ferric transport 100.0 7.4E-38 1.6E-42 370.4 25.2 207 182-431 18-225 (351)
89 TIGR03258 PhnT 2-aminoethylpho 100.0 8.5E-38 1.8E-42 371.0 25.1 208 182-431 17-227 (362)
90 TIGR03265 PhnT2 putative 2-ami 100.0 8.7E-38 1.9E-42 370.5 25.1 207 182-431 16-223 (353)
91 COG1124 DppF ABC-type dipeptid 100.0 6E-38 1.3E-42 336.1 21.1 217 855-1094 3-227 (252)
92 COG1122 CbiO ABC-type cobalt t 100.0 6.1E-38 1.3E-42 347.9 21.8 215 855-1093 3-223 (235)
93 cd03259 ABC_Carb_Solutes_like 100.0 1.3E-37 2.8E-42 346.6 24.5 210 857-1091 2-213 (213)
94 PRK10851 sulfate/thiosulfate t 100.0 1.8E-37 3.8E-42 367.9 26.5 218 855-1094 2-222 (353)
95 TIGR00960 3a0501s02 Type II (G 100.0 1.3E-37 2.7E-42 347.4 23.7 208 856-1086 2-215 (216)
96 TIGR01188 drrA daunorubicin re 100.0 9.9E-38 2.1E-42 365.1 23.8 202 880-1093 5-208 (302)
97 COG3840 ThiQ ABC-type thiamine 100.0 5.4E-38 1.2E-42 318.3 18.3 201 188-431 17-218 (231)
98 COG3840 ThiQ ABC-type thiamine 100.0 4.9E-38 1.1E-42 318.6 17.9 196 886-1093 17-214 (231)
99 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.7E-37 5.8E-42 345.8 25.6 215 857-1093 2-218 (220)
100 PRK09452 potA putrescine/sperm 100.0 1.6E-37 3.5E-42 369.8 24.9 218 183-451 27-245 (375)
101 PRK09452 potA putrescine/sperm 100.0 3.1E-37 6.8E-42 367.3 26.8 215 855-1094 14-230 (375)
102 TIGR01288 nodI ATP-binding ABC 100.0 3.3E-37 7.1E-42 360.8 26.6 214 855-1093 4-219 (303)
103 cd03269 ABC_putative_ATPase Th 100.0 2.7E-37 5.9E-42 343.2 24.1 209 857-1091 2-210 (210)
104 PRK13537 nodulation ABC transp 100.0 2.5E-37 5.4E-42 361.3 25.0 207 182-432 19-227 (306)
105 cd03265 ABC_DrrA DrrA is the A 100.0 3.5E-37 7.6E-42 344.8 25.0 212 857-1093 2-216 (220)
106 TIGR01186 proV glycine betaine 100.0 3.8E-37 8.2E-42 364.2 26.2 209 181-432 4-219 (363)
107 cd03301 ABC_MalK_N The N-termi 100.0 4.1E-37 9E-42 342.6 25.0 210 857-1091 2-213 (213)
108 TIGR02314 ABC_MetN D-methionin 100.0 4.3E-37 9.4E-42 361.9 26.4 206 183-431 18-229 (343)
109 COG1137 YhbG ABC-type (unclass 100.0 2.7E-38 5.8E-43 325.7 13.7 214 177-432 11-228 (243)
110 PRK11607 potG putrescine trans 100.0 6.9E-37 1.5E-41 365.1 28.0 215 855-1094 19-235 (377)
111 cd03219 ABC_Mj1267_LivG_branch 100.0 4.8E-37 1E-41 347.5 25.4 215 857-1093 2-227 (236)
112 COG1122 CbiO ABC-type cobalt t 100.0 1.6E-37 3.5E-42 344.6 20.8 207 183-432 17-228 (235)
113 PRK11153 metN DL-methionine tr 100.0 4.7E-37 1E-41 364.4 26.2 217 856-1093 2-225 (343)
114 cd03296 ABC_CysA_sulfate_impor 100.0 6.9E-37 1.5E-41 346.7 26.3 217 855-1093 2-221 (239)
115 cd03266 ABC_NatA_sodium_export 100.0 4.8E-37 1E-41 343.3 24.4 215 856-1091 2-218 (218)
116 TIGR01186 proV glycine betaine 100.0 4.1E-37 8.9E-42 363.9 25.0 204 879-1094 4-215 (363)
117 PRK11000 maltose/maltodextrin 100.0 6.2E-37 1.3E-41 366.1 26.6 215 855-1094 3-219 (369)
118 PRK09536 btuD corrinoid ABC tr 100.0 4.5E-37 9.7E-42 367.7 25.4 229 855-1105 3-237 (402)
119 COG0411 LivG ABC-type branched 100.0 9.4E-38 2E-42 335.0 17.4 226 176-432 10-239 (250)
120 cd03218 ABC_YhbG The ABC trans 100.0 6.5E-37 1.4E-41 345.6 25.1 212 857-1093 2-217 (232)
121 TIGR03522 GldA_ABC_ATP gliding 100.0 6.8E-37 1.5E-41 357.6 26.0 213 855-1093 2-216 (301)
122 cd03261 ABC_Org_Solvent_Resist 100.0 8E-37 1.7E-41 345.4 25.2 208 182-431 12-225 (235)
123 PRK10851 sulfate/thiosulfate t 100.0 7.4E-37 1.6E-41 362.6 25.7 210 183-431 15-225 (353)
124 PRK11607 potG putrescine trans 100.0 6.7E-37 1.5E-41 365.2 25.1 206 183-431 32-238 (377)
125 cd03260 ABC_PstB_phosphate_tra 100.0 6.5E-37 1.4E-41 344.4 23.6 213 857-1093 2-224 (227)
126 cd03234 ABCG_White The White s 100.0 1.2E-36 2.7E-41 341.7 25.7 221 856-1091 4-226 (226)
127 cd03268 ABC_BcrA_bacitracin_re 100.0 6.3E-37 1.4E-41 339.8 22.9 206 857-1091 2-208 (208)
128 COG2884 FtsE Predicted ATPase 100.0 4.5E-37 9.7E-42 314.8 19.8 200 183-426 15-220 (223)
129 COG0410 LivF ABC-type branched 100.0 6.9E-37 1.5E-41 325.9 21.9 211 178-432 11-226 (237)
130 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 7.5E-37 1.6E-41 341.7 23.3 208 857-1086 2-217 (218)
131 cd03256 ABC_PhnC_transporter A 100.0 7.7E-37 1.7E-41 347.0 23.6 216 857-1093 2-229 (241)
132 cd03258 ABC_MetN_methionine_tr 100.0 1.2E-36 2.5E-41 343.7 24.6 217 856-1093 2-225 (233)
133 TIGR01188 drrA daunorubicin re 100.0 1E-36 2.3E-41 356.5 24.9 207 182-432 5-213 (302)
134 cd03294 ABC_Pro_Gly_Bertaine T 100.0 9.9E-37 2.1E-41 351.0 24.1 204 878-1093 34-245 (269)
135 TIGR02673 FtsE cell division A 100.0 1.3E-36 2.8E-41 338.9 24.2 206 856-1084 2-213 (214)
136 cd03263 ABC_subfamily_A The AB 100.0 1.3E-36 2.9E-41 340.2 24.1 213 857-1093 2-216 (220)
137 PRK11000 maltose/maltodextrin 100.0 1.2E-36 2.6E-41 363.6 25.2 207 182-431 15-222 (369)
138 PRK11629 lolD lipoprotein tran 100.0 2.8E-36 6.1E-41 340.4 26.9 217 855-1093 5-229 (233)
139 cd03226 ABC_cobalt_CbiO_domain 100.0 6.9E-37 1.5E-41 338.6 21.4 192 881-1088 13-205 (205)
140 PRK09493 glnQ glutamine ABC tr 100.0 2.1E-36 4.4E-41 343.2 25.7 214 856-1093 2-220 (240)
141 KOG0058 Peptide exporter, ABC 100.0 5.1E-37 1.1E-41 370.8 21.9 214 177-432 475-691 (716)
142 PRK11264 putative amino-acid A 100.0 2.3E-36 5E-41 345.0 25.9 214 856-1093 4-228 (250)
143 PRK13637 cbiO cobalt transport 100.0 2.1E-36 4.5E-41 351.1 25.9 219 855-1093 2-229 (287)
144 PRK13536 nodulation factor exp 100.0 1.8E-36 3.9E-41 357.5 25.5 208 181-432 52-261 (340)
145 COG4152 ABC-type uncharacteriz 100.0 4.9E-37 1.1E-41 325.1 18.4 213 856-1094 3-215 (300)
146 cd03292 ABC_FtsE_transporter F 100.0 1.6E-36 3.5E-41 338.1 23.6 206 857-1086 2-213 (214)
147 PRK11248 tauB taurine transpor 100.0 3.2E-36 7E-41 343.8 26.3 212 856-1093 2-215 (255)
148 COG0411 LivG ABC-type branched 100.0 8.4E-37 1.8E-41 327.7 19.9 207 879-1094 15-235 (250)
149 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.3E-36 5E-41 343.1 24.8 213 857-1093 2-220 (242)
150 TIGR02315 ABC_phnC phosphonate 100.0 1.3E-36 2.9E-41 345.5 22.6 218 856-1094 2-231 (243)
151 COG1124 DppF ABC-type dipeptid 100.0 1.1E-36 2.4E-41 326.4 20.4 204 184-432 21-231 (252)
152 COG4559 ABC-type hemin transpo 100.0 1.1E-36 2.3E-41 316.6 19.6 226 856-1104 2-238 (259)
153 cd03224 ABC_TM1139_LivF_branch 100.0 1.8E-36 4E-41 339.6 23.3 210 857-1093 2-216 (222)
154 PRK13647 cbiO cobalt transport 100.0 2.9E-36 6.3E-41 347.8 25.2 215 855-1093 4-222 (274)
155 PRK11831 putative ABC transpor 100.0 4E-36 8.6E-41 346.1 26.1 215 855-1093 7-228 (269)
156 KOG0058 Peptide exporter, ABC 100.0 3.5E-37 7.6E-42 372.2 17.9 215 854-1093 464-686 (716)
157 COG0410 LivF ABC-type branched 100.0 1.3E-36 2.9E-41 323.7 20.2 214 856-1095 4-223 (237)
158 PRK10895 lipopolysaccharide AB 100.0 3.3E-36 7.1E-41 341.7 24.3 215 855-1093 3-221 (241)
159 PRK13651 cobalt transporter AT 100.0 3.9E-36 8.4E-41 350.5 25.3 219 855-1093 2-249 (305)
160 PRK13634 cbiO cobalt transport 100.0 3.6E-36 7.8E-41 349.7 24.9 218 856-1093 3-230 (290)
161 PRK10908 cell division protein 100.0 5E-36 1.1E-40 335.9 25.1 209 856-1088 2-216 (222)
162 cd03264 ABC_drug_resistance_li 100.0 3.2E-36 6.9E-41 334.9 23.1 208 857-1091 2-211 (211)
163 cd03257 ABC_NikE_OppD_transpor 100.0 5E-36 1.1E-40 337.5 24.8 217 856-1091 2-228 (228)
164 cd03262 ABC_HisP_GlnQ_permease 100.0 3.7E-36 8E-41 334.9 23.4 206 857-1086 2-212 (213)
165 cd03259 ABC_Carb_Solutes_like 100.0 3.5E-36 7.7E-41 335.0 23.2 200 183-425 13-213 (213)
166 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.3E-36 1.6E-40 337.7 26.1 212 856-1093 2-216 (236)
167 cd03265 ABC_DrrA DrrA is the A 100.0 4E-36 8.8E-41 336.2 23.3 206 182-430 12-219 (220)
168 PRK10619 histidine/lysine/argi 100.0 8.2E-36 1.8E-40 341.6 26.2 215 855-1093 5-236 (257)
169 PRK13636 cbiO cobalt transport 100.0 6.7E-36 1.4E-40 346.4 25.5 216 855-1094 5-227 (283)
170 TIGR00972 3a0107s01c2 phosphat 100.0 8.4E-36 1.8E-40 339.6 25.9 214 856-1093 2-227 (247)
171 PRK11247 ssuB aliphatic sulfon 100.0 5.8E-36 1.3E-40 341.2 24.5 206 855-1093 12-218 (257)
172 PRK13631 cbiO cobalt transport 100.0 7.3E-36 1.6E-40 350.2 25.9 218 855-1093 21-260 (320)
173 TIGR03740 galliderm_ABC gallid 100.0 9E-36 2E-40 334.1 25.5 218 857-1105 2-219 (223)
174 COG2274 SunT ABC-type bacterio 100.0 3.6E-36 7.8E-41 379.4 24.8 207 184-432 487-696 (709)
175 PRK13643 cbiO cobalt transport 100.0 7.3E-36 1.6E-40 346.8 25.5 218 856-1093 2-228 (288)
176 cd03235 ABC_Metallic_Cations A 100.0 2.7E-36 5.8E-41 336.0 21.0 199 881-1091 12-213 (213)
177 PRK11153 metN DL-methionine tr 100.0 6.5E-36 1.4E-40 354.6 25.6 207 182-431 17-229 (343)
178 TIGR01288 nodI ATP-binding ABC 100.0 6.1E-36 1.3E-40 350.2 24.9 207 182-432 16-224 (303)
179 TIGR02211 LolD_lipo_ex lipopro 100.0 7.3E-36 1.6E-40 334.5 24.5 211 856-1088 2-220 (221)
180 PRK13650 cbiO cobalt transport 100.0 5.3E-36 1.2E-40 346.5 24.1 216 855-1093 4-224 (279)
181 PRK15079 oligopeptide ABC tran 100.0 1.1E-35 2.4E-40 349.9 27.2 229 855-1093 8-246 (331)
182 cd03225 ABC_cobalt_CbiO_domain 100.0 4E-36 8.6E-41 334.2 22.1 193 881-1084 14-210 (211)
183 PRK13646 cbiO cobalt transport 100.0 7.2E-36 1.6E-40 346.7 25.1 218 855-1093 2-230 (286)
184 PRK11300 livG leucine/isoleuci 100.0 9.3E-36 2E-40 341.0 25.4 218 855-1094 5-239 (255)
185 cd03219 ABC_Mj1267_LivG_branch 100.0 8.1E-36 1.8E-40 337.6 24.6 215 183-431 13-231 (236)
186 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1E-35 2.2E-40 342.6 25.7 211 178-431 32-249 (269)
187 PRK11614 livF leucine/isoleuci 100.0 7.2E-36 1.6E-40 338.1 23.9 213 855-1094 5-222 (237)
188 PRK13641 cbiO cobalt transport 100.0 1E-35 2.2E-40 345.6 25.7 219 855-1093 2-229 (287)
189 COG2274 SunT ABC-type bacterio 100.0 1E-34 2.2E-39 366.3 36.5 214 852-1093 468-691 (709)
190 PRK11124 artP arginine transpo 100.0 1.3E-35 2.8E-40 337.1 25.4 214 855-1093 2-225 (242)
191 PRK13644 cbiO cobalt transport 100.0 9.4E-36 2E-40 343.6 24.5 213 856-1093 2-219 (274)
192 cd03296 ABC_CysA_sulfate_impor 100.0 1.3E-35 2.8E-40 336.4 25.0 210 183-431 15-225 (239)
193 TIGR03411 urea_trans_UrtD urea 100.0 1.5E-35 3.3E-40 336.6 25.7 215 856-1093 3-226 (242)
194 TIGR03005 ectoine_ehuA ectoine 100.0 1.4E-35 3E-40 338.8 25.3 213 857-1093 2-231 (252)
195 cd03218 ABC_YhbG The ABC trans 100.0 1.1E-35 2.4E-40 335.6 24.2 205 182-430 12-220 (232)
196 PRK10070 glycine betaine trans 100.0 1.3E-35 2.8E-40 355.0 25.9 202 880-1093 40-249 (400)
197 PRK14247 phosphate ABC transpo 100.0 1.9E-35 4.1E-40 337.4 26.0 217 855-1093 3-229 (250)
198 cd03258 ABC_MetN_methionine_tr 100.0 1.4E-35 3E-40 334.9 24.7 205 184-431 19-229 (233)
199 TIGR01978 sufC FeS assembly AT 100.0 1.6E-35 3.5E-40 336.7 25.3 218 857-1093 2-229 (243)
200 PRK14273 phosphate ABC transpo 100.0 2E-35 4.4E-40 337.9 26.1 215 855-1093 7-233 (254)
201 PRK14267 phosphate ABC transpo 100.0 2E-35 4.2E-40 337.9 25.8 217 855-1093 4-232 (253)
202 PRK13637 cbiO cobalt transport 100.0 1.8E-35 4E-40 343.3 25.8 218 183-443 20-248 (287)
203 PRK14268 phosphate ABC transpo 100.0 2.3E-35 5E-40 338.0 26.3 214 855-1093 12-237 (258)
204 TIGR03522 GldA_ABC_ATP gliding 100.0 1.1E-35 2.4E-40 347.4 24.1 206 182-432 14-221 (301)
205 PRK13548 hmuV hemin importer A 100.0 1.8E-35 3.8E-40 338.6 25.1 214 856-1094 3-226 (258)
206 cd03224 ABC_TM1139_LivF_branch 100.0 1.3E-35 2.9E-40 332.7 23.6 203 183-431 13-220 (222)
207 PRK13652 cbiO cobalt transport 100.0 1.9E-35 4.1E-40 341.8 25.6 214 856-1093 4-222 (277)
208 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.6E-35 3.5E-40 331.4 24.2 200 183-427 17-218 (220)
209 cd03260 ABC_PstB_phosphate_tra 100.0 9.7E-36 2.1E-40 334.8 22.5 204 183-429 13-226 (227)
210 cd03301 ABC_MalK_N The N-termi 100.0 1.5E-35 3.3E-40 330.0 23.8 200 183-425 13-213 (213)
211 PRK09984 phosphonate/organopho 100.0 1.8E-35 3.9E-40 339.8 25.1 233 855-1107 4-252 (262)
212 PRK13635 cbiO cobalt transport 100.0 1.5E-35 3.3E-40 342.5 24.3 215 855-1093 5-224 (279)
213 COG4175 ProV ABC-type proline/ 100.0 4.3E-36 9.4E-41 328.5 18.5 223 181-454 39-268 (386)
214 PRK13638 cbiO cobalt transport 100.0 2E-35 4.3E-40 340.9 25.1 213 856-1093 2-220 (271)
215 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.6E-35 3.5E-40 329.2 23.4 194 886-1091 16-211 (211)
216 PRK11231 fecE iron-dicitrate t 100.0 2.1E-35 4.6E-40 337.8 24.3 217 856-1094 3-223 (255)
217 cd03263 ABC_subfamily_A The AB 100.0 1.6E-35 3.4E-40 331.5 22.7 203 183-430 15-219 (220)
218 cd03269 ABC_putative_ATPase Th 100.0 1.4E-35 3.1E-40 329.4 22.2 198 183-425 13-210 (210)
219 TIGR03410 urea_trans_UrtE urea 100.0 2.2E-35 4.8E-40 332.6 24.0 210 857-1094 2-217 (230)
220 PRK14241 phosphate transporter 100.0 3.7E-35 7.9E-40 336.4 26.0 217 855-1093 4-237 (258)
221 cd03233 ABC_PDR_domain1 The pl 100.0 2.9E-35 6.3E-40 324.4 24.1 196 855-1091 3-202 (202)
222 KOG0062 ATPase component of AB 100.0 4.5E-35 9.8E-40 338.5 26.4 205 852-1093 359-564 (582)
223 PRK10575 iron-hydroxamate tran 100.0 2.5E-35 5.5E-40 338.8 24.5 218 855-1094 11-233 (265)
224 cd03256 ABC_PhnC_transporter A 100.0 2.7E-35 5.9E-40 334.4 24.3 213 183-430 14-232 (241)
225 TIGR02769 nickel_nikE nickel i 100.0 4.2E-35 9.2E-40 337.0 26.1 223 856-1093 3-235 (265)
226 PRK10070 glycine betaine trans 100.0 3.4E-35 7.3E-40 351.4 26.2 208 181-431 39-253 (400)
227 PRK10253 iron-enterobactin tra 100.0 2.5E-35 5.5E-40 338.9 24.2 218 855-1094 7-229 (265)
228 TIGR00960 3a0501s02 Type II (G 100.0 1.6E-35 3.4E-40 330.5 21.8 195 183-421 16-216 (216)
229 PRK13649 cbiO cobalt transport 100.0 3.6E-35 7.9E-40 340.4 25.7 218 855-1093 2-229 (280)
230 PRK13639 cbiO cobalt transport 100.0 3.7E-35 8.1E-40 339.0 25.3 214 856-1093 2-221 (275)
231 PRK14242 phosphate transporter 100.0 5.4E-35 1.2E-39 334.2 26.3 220 854-1093 5-232 (253)
232 PRK10584 putative ABC transpor 100.0 5.5E-35 1.2E-39 329.0 25.9 213 855-1089 6-226 (228)
233 PRK09536 btuD corrinoid ABC tr 100.0 2.4E-35 5.2E-40 352.9 24.3 210 182-431 15-227 (402)
234 PRK11831 putative ABC transpor 100.0 4.2E-35 9.1E-40 337.6 25.5 207 183-431 20-232 (269)
235 TIGR03873 F420-0_ABC_ATP propo 100.0 3E-35 6.6E-40 336.7 24.0 217 856-1094 2-222 (256)
236 PRK13634 cbiO cobalt transport 100.0 3.5E-35 7.7E-40 341.4 24.9 216 183-442 20-248 (290)
237 PRK10744 pstB phosphate transp 100.0 5.1E-35 1.1E-39 335.5 25.8 217 853-1093 11-239 (260)
238 cd03268 ABC_BcrA_bacitracin_re 100.0 2E-35 4.3E-40 327.8 21.6 196 182-425 12-208 (208)
239 cd03226 ABC_cobalt_CbiO_domain 100.0 2E-35 4.3E-40 327.0 21.5 192 183-422 13-205 (205)
240 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.2E-35 9.1E-40 332.8 24.7 206 183-431 14-224 (242)
241 PRK14256 phosphate ABC transpo 100.0 7.9E-35 1.7E-39 332.6 27.2 220 855-1093 4-231 (252)
242 TIGR01184 ntrCD nitrate transp 100.0 2.7E-35 5.9E-40 331.4 23.0 198 884-1093 1-199 (230)
243 PRK11308 dppF dipeptide transp 100.0 5.9E-35 1.3E-39 343.6 26.8 226 855-1094 5-240 (327)
244 PRK13643 cbiO cobalt transport 100.0 3.3E-35 7.2E-40 341.3 24.3 220 184-448 20-252 (288)
245 PRK11022 dppD dipeptide transp 100.0 6.9E-35 1.5E-39 343.1 27.1 221 855-1093 3-238 (326)
246 PRK14245 phosphate ABC transpo 100.0 6.6E-35 1.4E-39 332.9 26.1 219 855-1093 3-229 (250)
247 TIGR03415 ABC_choXWV_ATP choli 100.0 3.1E-35 6.8E-40 349.2 24.3 204 879-1094 35-250 (382)
248 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.3E-35 4.9E-40 329.8 21.8 195 183-421 17-218 (218)
249 PRK13549 xylose transporter AT 100.0 3.7E-35 8.1E-40 367.8 26.2 221 855-1095 5-229 (506)
250 PRK10771 thiQ thiamine transpo 100.0 4.3E-35 9.3E-40 330.6 24.2 212 856-1094 2-215 (232)
251 COG4525 TauB ABC-type taurine 100.0 2.8E-35 6E-40 301.4 20.1 201 881-1094 18-220 (259)
252 PRK13632 cbiO cobalt transport 100.0 5.2E-35 1.1E-39 337.2 24.9 215 855-1093 7-226 (271)
253 TIGR03415 ABC_choXWV_ATP choli 100.0 5.1E-35 1.1E-39 347.4 25.5 210 179-431 33-253 (382)
254 cd03300 ABC_PotA_N PotA is an 100.0 7.3E-35 1.6E-39 328.6 25.5 212 857-1093 2-215 (232)
255 PRK13647 cbiO cobalt transport 100.0 5.8E-35 1.3E-39 337.0 25.3 204 183-430 18-225 (274)
256 PRK09493 glnQ glutamine ABC tr 100.0 4.9E-35 1.1E-39 332.0 24.0 205 183-431 14-224 (240)
257 PRK09473 oppD oligopeptide tra 100.0 7.6E-35 1.6E-39 343.1 26.5 224 855-1093 12-246 (330)
258 PRK15079 oligopeptide ABC tran 100.0 6.9E-35 1.5E-39 343.2 26.1 209 182-431 33-250 (331)
259 PRK11264 putative amino-acid A 100.0 5.3E-35 1.1E-39 333.8 24.4 205 183-431 16-232 (250)
260 PRK14235 phosphate transporter 100.0 8.1E-35 1.7E-39 334.9 26.1 216 855-1093 19-246 (267)
261 TIGR02315 ABC_phnC phosphonate 100.0 3.2E-35 6.9E-40 334.2 22.5 213 183-430 15-233 (243)
262 cd03232 ABC_PDR_domain2 The pl 100.0 5.1E-35 1.1E-39 319.9 23.2 190 855-1091 3-192 (192)
263 PRK13648 cbiO cobalt transport 100.0 6.8E-35 1.5E-39 336.0 25.4 216 855-1094 7-227 (269)
264 cd03267 ABC_NatA_like Similar 100.0 5.6E-35 1.2E-39 330.2 24.0 201 879-1091 32-236 (236)
265 cd03266 ABC_NatA_sodium_export 100.0 3.7E-35 8.1E-40 328.0 22.3 198 184-425 19-218 (218)
266 PRK13547 hmuV hemin importer A 100.0 5.2E-35 1.1E-39 336.1 23.8 219 856-1094 2-240 (272)
267 PRK13645 cbiO cobalt transport 100.0 6.9E-35 1.5E-39 339.4 25.1 219 855-1093 6-235 (289)
268 TIGR01277 thiQ thiamine ABC tr 100.0 7.6E-35 1.6E-39 324.2 24.3 198 883-1092 13-212 (213)
269 PRK14269 phosphate ABC transpo 100.0 7.7E-35 1.7E-39 331.4 24.9 219 856-1093 3-225 (246)
270 PRK13650 cbiO cobalt transport 100.0 8E-35 1.7E-39 336.7 25.3 205 183-431 20-228 (279)
271 PRK14237 phosphate transporter 100.0 1.3E-34 2.8E-39 333.2 26.9 224 850-1093 15-246 (267)
272 PRK13633 cobalt transporter AT 100.0 6.1E-35 1.3E-39 338.1 24.2 219 855-1093 4-228 (280)
273 KOG0057 Mitochondrial Fe/S clu 100.0 6.6E-35 1.4E-39 340.6 24.4 207 183-432 365-574 (591)
274 PRK00635 excinuclease ABC subu 100.0 2.3E-33 4.9E-38 374.8 42.4 135 952-1094 759-902 (1809)
275 TIGR00968 3a0106s01 sulfate AB 100.0 9.3E-35 2E-39 328.7 25.0 212 857-1093 2-215 (237)
276 COG4559 ABC-type hemin transpo 100.0 3.8E-35 8.3E-40 305.0 19.9 208 183-432 14-230 (259)
277 COG4988 CydD ABC-type transpor 100.0 6.5E-35 1.4E-39 347.1 24.7 206 184-432 335-543 (559)
278 PRK00349 uvrA excinuclease ABC 100.0 1.8E-33 4E-38 363.6 40.2 123 955-1093 791-922 (943)
279 PRK13640 cbiO cobalt transport 100.0 7.2E-35 1.6E-39 337.6 24.5 217 855-1093 5-227 (282)
280 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1E-34 2.2E-39 328.4 25.0 207 182-432 13-221 (236)
281 COG4181 Predicted ABC-type tra 100.0 3.1E-35 6.7E-40 295.0 18.3 199 878-1089 20-226 (228)
282 TIGR03608 L_ocin_972_ABC putat 100.0 4.8E-35 1.1E-39 324.2 22.0 189 881-1081 11-206 (206)
283 PRK11629 lolD lipoprotein tran 100.0 9.3E-35 2E-39 328.1 24.6 201 183-427 22-229 (233)
284 PRK14250 phosphate ABC transpo 100.0 7.4E-35 1.6E-39 330.4 23.6 209 855-1093 3-216 (241)
285 COG4988 CydD ABC-type transpor 100.0 2.6E-35 5.7E-40 350.5 20.6 213 852-1093 317-538 (559)
286 cd03299 ABC_ModC_like Archeal 100.0 1.2E-34 2.7E-39 327.3 25.1 199 883-1093 14-214 (235)
287 PRK15093 antimicrobial peptide 100.0 1.4E-34 3E-39 341.7 26.5 223 855-1093 3-243 (330)
288 PRK14259 phosphate ABC transpo 100.0 1.1E-34 2.3E-39 334.1 24.8 215 854-1093 12-248 (269)
289 PRK13651 cobalt transporter AT 100.0 7.6E-35 1.7E-39 339.7 23.8 205 183-431 20-253 (305)
290 PRK10895 lipopolysaccharide AB 100.0 1E-34 2.2E-39 329.6 24.2 206 183-431 16-225 (241)
291 COG4525 TauB ABC-type taurine 100.0 7.4E-35 1.6E-39 298.2 20.7 206 183-433 18-225 (259)
292 PRK13631 cbiO cobalt transport 100.0 1.2E-34 2.6E-39 339.9 25.1 216 183-443 39-279 (320)
293 cd03264 ABC_drug_resistance_li 100.0 5.8E-35 1.3E-39 324.8 21.2 197 183-425 13-211 (211)
294 PRK11144 modC molybdate transp 100.0 1.1E-34 2.5E-39 345.2 25.1 191 886-1094 16-214 (352)
295 PRK15112 antimicrobial peptide 100.0 1.3E-34 2.7E-39 333.3 24.6 224 855-1093 4-234 (267)
296 TIGR02142 modC_ABC molybdenum 100.0 1.2E-34 2.5E-39 345.6 25.0 194 886-1093 15-216 (354)
297 PRK11144 modC molybdate transp 100.0 9.2E-35 2E-39 346.0 24.0 195 188-431 16-217 (352)
298 PRK14239 phosphate transporter 100.0 2E-34 4.3E-39 329.5 25.7 215 855-1093 5-231 (252)
299 PRK14270 phosphate ABC transpo 100.0 2.1E-34 4.6E-39 328.9 25.7 215 855-1093 4-230 (251)
300 PRK11614 livF leucine/isoleuci 100.0 9.4E-35 2E-39 329.0 22.5 203 183-431 18-225 (237)
301 PRK14274 phosphate ABC transpo 100.0 2E-34 4.3E-39 330.6 25.4 215 855-1093 12-238 (259)
302 TIGR03410 urea_trans_UrtE urea 100.0 1.2E-34 2.5E-39 326.8 23.0 203 182-430 12-219 (230)
303 PRK14244 phosphate ABC transpo 100.0 2E-34 4.3E-39 329.1 25.1 219 856-1093 6-232 (251)
304 PRK10762 D-ribose transporter 100.0 1.3E-34 2.8E-39 362.5 25.8 219 855-1095 4-227 (501)
305 COG0444 DppD ABC-type dipeptid 100.0 1.5E-34 3.3E-39 323.8 23.5 224 856-1093 2-238 (316)
306 cd03234 ABCG_White The White s 100.0 1.5E-34 3.3E-39 324.8 23.7 204 182-425 19-226 (226)
307 TIGR00972 3a0107s01c2 phosphat 100.0 1.8E-34 3.9E-39 328.7 24.6 207 183-431 14-231 (247)
308 PRK14240 phosphate transporter 100.0 2.7E-34 5.9E-39 327.9 26.1 215 855-1093 3-229 (250)
309 cd03213 ABCG_EPDR ABCG transpo 100.0 1.9E-34 4.1E-39 315.9 23.8 190 855-1091 3-194 (194)
310 TIGR02673 FtsE cell division A 100.0 1.1E-34 2.4E-39 323.2 22.4 194 183-420 15-214 (214)
311 cd03257 ABC_NikE_OppD_transpor 100.0 1.9E-34 4.1E-39 324.7 24.4 201 184-425 19-228 (228)
312 PRK13642 cbiO cobalt transport 100.0 1.8E-34 3.9E-39 333.6 24.7 216 855-1093 4-224 (277)
313 PRK11248 tauB taurine transpor 100.0 1.8E-34 3.9E-39 329.4 24.3 201 183-428 14-216 (255)
314 PRK14260 phosphate ABC transpo 100.0 2.7E-34 5.9E-39 329.3 25.7 216 855-1093 7-238 (259)
315 PRK11247 ssuB aliphatic sulfon 100.0 1.2E-34 2.6E-39 330.3 22.6 195 183-428 25-219 (257)
316 PRK13646 cbiO cobalt transport 100.0 1.2E-34 2.7E-39 336.3 22.9 205 183-431 20-234 (286)
317 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.7E-33 8.1E-38 362.4 39.3 208 855-1093 451-668 (686)
318 cd03297 ABC_ModC_molybdenum_tr 100.0 1.6E-34 3.5E-39 321.9 22.7 191 886-1091 16-214 (214)
319 PRK13635 cbiO cobalt transport 100.0 2.7E-34 5.9E-39 332.1 25.3 216 183-442 20-242 (279)
320 PRK14262 phosphate ABC transpo 100.0 3.7E-34 8E-39 326.8 26.0 218 856-1093 4-229 (250)
321 cd03292 ABC_FtsE_transporter F 100.0 1.3E-34 2.9E-39 322.6 21.8 195 183-421 14-214 (214)
322 TIGR02142 modC_ABC molybdenum 100.0 1.9E-34 4.2E-39 343.8 24.7 199 188-431 15-220 (354)
323 TIGR02770 nickel_nikD nickel i 100.0 1.8E-34 4E-39 325.0 23.1 201 883-1093 1-210 (230)
324 PRK09473 oppD oligopeptide tra 100.0 6.7E-34 1.5E-38 335.0 28.7 215 182-432 28-251 (330)
325 PRK14272 phosphate ABC transpo 100.0 4.7E-34 1E-38 326.4 26.6 216 855-1093 4-231 (252)
326 PRK14253 phosphate ABC transpo 100.0 3.4E-34 7.4E-39 326.8 25.4 219 855-1093 3-228 (249)
327 PRK10418 nikD nickel transport 100.0 4.1E-34 8.9E-39 326.9 26.0 213 855-1093 4-225 (254)
328 PRK09700 D-allose transporter 100.0 1.8E-34 3.8E-39 362.3 25.2 219 855-1095 5-231 (510)
329 TIGR03411 urea_trans_UrtD urea 100.0 3.2E-34 6.8E-39 325.8 24.8 211 183-430 15-229 (242)
330 PRK14257 phosphate ABC transpo 100.0 3.8E-34 8.2E-39 336.7 26.3 220 855-1093 80-308 (329)
331 cd03233 ABC_PDR_domain1 The pl 100.0 3.5E-34 7.6E-39 315.8 24.4 180 181-425 18-202 (202)
332 PRK11701 phnK phosphonate C-P 100.0 3.7E-34 8E-39 328.1 25.4 215 855-1093 6-236 (258)
333 PRK10619 histidine/lysine/argi 100.0 2.1E-34 4.6E-39 330.0 23.3 205 183-431 18-240 (257)
334 PRK15056 manganese/iron transp 100.0 3.1E-34 6.8E-39 330.9 24.8 218 855-1094 6-226 (272)
335 TIGR03740 galliderm_ABC gallid 100.0 2.8E-34 6E-39 322.1 23.7 198 182-428 12-209 (223)
336 PRK13641 cbiO cobalt transport 100.0 2.5E-34 5.4E-39 334.0 24.1 205 183-431 20-233 (287)
337 PRK11308 dppF dipeptide transp 100.0 4.4E-34 9.4E-39 336.2 26.4 208 183-432 28-244 (327)
338 KOG0057 Mitochondrial Fe/S clu 100.0 3.8E-35 8.3E-40 342.6 17.2 209 855-1093 351-569 (591)
339 TIGR02982 heterocyst_DevA ABC 100.0 3.4E-34 7.3E-39 320.7 24.2 211 856-1087 2-219 (220)
340 TIGR03005 ectoine_ehuA ectoine 100.0 3.3E-34 7.3E-39 327.4 24.7 206 183-431 13-235 (252)
341 PRK13636 cbiO cobalt transport 100.0 2.9E-34 6.3E-39 332.8 24.4 207 183-432 19-231 (283)
342 PRK14236 phosphate transporter 100.0 5.6E-34 1.2E-38 328.8 26.7 219 855-1093 25-251 (272)
343 COG1245 Predicted ATPase, RNas 100.0 1.2E-32 2.5E-37 313.0 36.7 195 885-1107 358-556 (591)
344 PRK10908 cell division protein 100.0 2.6E-34 5.6E-39 322.1 23.0 196 183-422 15-216 (222)
345 COG4175 ProV ABC-type proline/ 100.0 6.4E-35 1.4E-39 319.4 17.5 201 882-1094 42-250 (386)
346 PRK13548 hmuV hemin importer A 100.0 3.1E-34 6.8E-39 328.4 24.1 206 183-431 15-229 (258)
347 PRK14248 phosphate ABC transpo 100.0 4.9E-34 1.1E-38 328.8 25.8 215 855-1093 21-247 (268)
348 PRK11022 dppD dipeptide transp 100.0 7E-34 1.5E-38 334.6 27.6 211 183-432 20-243 (326)
349 PRK14258 phosphate ABC transpo 100.0 5.8E-34 1.2E-38 326.9 26.3 221 855-1093 7-240 (261)
350 PRK14271 phosphate ABC transpo 100.0 1.1E-33 2.3E-38 326.7 28.5 219 855-1093 21-246 (276)
351 PRK13644 cbiO cobalt transport 100.0 2.9E-34 6.2E-39 331.3 23.6 204 183-431 15-223 (274)
352 PRK13543 cytochrome c biogenes 100.0 3.6E-34 7.8E-39 318.9 23.4 201 855-1082 11-211 (214)
353 cd03225 ABC_cobalt_CbiO_domain 100.0 2.6E-34 5.6E-39 319.6 22.1 194 183-420 14-211 (211)
354 PRK13632 cbiO cobalt transport 100.0 7.1E-34 1.5E-38 327.8 26.5 205 183-431 22-230 (271)
355 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 4.3E-34 9.2E-39 320.3 23.9 194 877-1091 31-224 (224)
356 PRK11300 livG leucine/isoleuci 100.0 4E-34 8.8E-39 327.5 24.2 221 183-431 18-242 (255)
357 PRK14254 phosphate ABC transpo 100.0 9.2E-34 2E-38 328.5 27.5 213 855-1093 39-264 (285)
358 cd03235 ABC_Metallic_Cations A 100.0 2.4E-34 5.1E-39 320.4 21.5 200 183-425 12-213 (213)
359 PRK14247 phosphate ABC transpo 100.0 5.1E-34 1.1E-38 325.7 24.8 209 183-431 16-233 (250)
360 TIGR02211 LolD_lipo_ex lipopro 100.0 4.1E-34 8.9E-39 320.3 23.5 196 183-422 18-220 (221)
361 PRK14275 phosphate ABC transpo 100.0 5.8E-34 1.3E-38 330.5 25.5 215 855-1093 39-265 (286)
362 PRK11124 artP arginine transpo 100.0 3.7E-34 8E-39 325.2 23.3 204 183-430 15-228 (242)
363 TIGR02633 xylG D-xylose ABC tr 100.0 4.8E-34 1E-38 357.8 26.6 220 856-1095 2-227 (500)
364 PRK14268 phosphate ABC transpo 100.0 4.5E-34 9.8E-39 327.3 24.2 206 183-431 25-241 (258)
365 PRK14251 phosphate ABC transpo 100.0 6.7E-34 1.5E-38 324.8 25.5 215 855-1093 4-230 (251)
366 TIGR01978 sufC FeS assembly AT 100.0 4.9E-34 1.1E-38 324.5 24.2 214 182-431 12-233 (243)
367 PRK13638 cbiO cobalt transport 100.0 5.3E-34 1.2E-38 329.0 24.9 205 183-431 14-224 (271)
368 PRK14261 phosphate ABC transpo 100.0 6.6E-34 1.4E-38 325.2 25.3 219 855-1093 6-232 (253)
369 PRK14273 phosphate ABC transpo 100.0 4.3E-34 9.4E-39 326.9 23.8 207 183-431 20-237 (254)
370 PRK11174 cysteine/glutathione 100.0 2.5E-34 5.4E-39 367.7 24.3 207 183-432 363-572 (588)
371 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 9E-33 1.9E-37 360.5 39.3 209 855-1093 477-695 (710)
372 TIGR02769 nickel_nikE nickel i 100.0 7E-34 1.5E-38 326.9 25.6 208 182-431 23-239 (265)
373 PRK14263 phosphate ABC transpo 100.0 8.1E-34 1.8E-38 325.2 26.0 219 854-1093 7-240 (261)
374 PRK14267 phosphate ABC transpo 100.0 5.1E-34 1.1E-38 326.2 24.2 209 183-431 17-236 (253)
375 PRK14249 phosphate ABC transpo 100.0 8.1E-34 1.8E-38 324.1 25.8 219 855-1093 4-230 (251)
376 PRK13538 cytochrome c biogenes 100.0 3.5E-34 7.7E-39 316.6 22.1 199 856-1081 2-202 (204)
377 TIGR01184 ntrCD nitrate transp 100.0 4.5E-34 9.8E-39 321.5 23.3 202 186-430 1-202 (230)
378 cd03231 ABC_CcmA_heme_exporter 100.0 3E-34 6.6E-39 316.3 21.5 195 857-1081 2-198 (201)
379 cd03267 ABC_NatA_like Similar 100.0 6E-34 1.3E-38 321.8 24.3 204 179-425 30-236 (236)
380 PRK14250 phosphate ABC transpo 100.0 4.3E-34 9.2E-39 324.2 23.1 201 183-431 16-220 (241)
381 COG4604 CeuD ABC-type enteroch 100.0 2.5E-35 5.4E-40 302.5 11.6 216 879-1104 12-233 (252)
382 PRK11174 cysteine/glutathione 100.0 1.4E-34 3.1E-39 369.9 21.5 209 855-1093 349-567 (588)
383 PRK11231 fecE iron-dicitrate t 100.0 3.3E-34 7.1E-39 328.0 22.2 210 182-431 14-226 (255)
384 PRK10419 nikE nickel transport 100.0 6.9E-34 1.5E-38 327.2 24.9 224 856-1094 4-237 (268)
385 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.4E-34 9.5E-39 317.7 22.5 195 188-425 16-211 (211)
386 TIGR02770 nickel_nikD nickel i 100.0 6.4E-34 1.4E-38 320.5 24.1 204 185-431 1-214 (230)
387 PRK14255 phosphate ABC transpo 100.0 1.2E-33 2.5E-38 323.1 26.3 215 855-1093 5-231 (252)
388 PRK13652 cbiO cobalt transport 100.0 5.4E-34 1.2E-38 329.7 23.8 205 184-431 18-226 (277)
389 PRK15439 autoinducer 2 ABC tra 100.0 5E-34 1.1E-38 357.4 25.4 212 855-1095 11-226 (510)
390 COG0444 DppD ABC-type dipeptid 100.0 1.2E-33 2.6E-38 316.7 25.6 232 182-456 17-259 (316)
391 PRK13639 cbiO cobalt transport 100.0 1.1E-33 2.3E-38 326.9 25.9 205 183-431 15-225 (275)
392 PRK14242 phosphate transporter 100.0 8.7E-34 1.9E-38 324.3 24.9 207 183-431 19-236 (253)
393 cd03252 ABCC_Hemolysin The ABC 100.0 1.6E-34 3.6E-39 327.1 18.5 209 857-1093 2-220 (237)
394 cd03300 ABC_PotA_N PotA is an 100.0 1E-33 2.2E-38 319.3 24.9 206 183-431 13-219 (232)
395 PRK10247 putative ABC transpor 100.0 4.6E-34 1E-38 320.5 21.9 209 855-1091 7-220 (225)
396 PRK11288 araG L-arabinose tran 100.0 6.8E-34 1.5E-38 356.0 25.8 216 855-1092 4-223 (501)
397 PRK13649 cbiO cobalt transport 100.0 9.9E-34 2.1E-38 328.5 25.2 204 183-431 20-233 (280)
398 PRK14265 phosphate ABC transpo 100.0 1.2E-33 2.5E-38 326.2 25.5 215 854-1093 19-253 (274)
399 PRK10575 iron-hydroxamate tran 100.0 7.3E-34 1.6E-38 326.8 23.7 209 183-430 24-235 (265)
400 PRK10253 iron-enterobactin tra 100.0 6.8E-34 1.5E-38 327.0 23.5 210 182-431 19-232 (265)
401 PRK14238 phosphate transporter 100.0 9.6E-34 2.1E-38 326.5 24.7 215 855-1093 24-250 (271)
402 CHL00131 ycf16 sulfate ABC tra 100.0 1.9E-33 4.1E-38 321.4 26.9 220 855-1093 7-236 (252)
403 cd03262 ABC_HisP_GlnQ_permease 100.0 4.6E-34 1E-38 318.1 21.4 195 183-421 13-213 (213)
404 PRK13633 cobalt transporter AT 100.0 1E-33 2.2E-38 327.9 24.9 205 183-431 23-232 (280)
405 TIGR03873 F420-0_ABC_ATP propo 100.0 6.7E-34 1.4E-38 325.7 23.0 208 183-430 14-224 (256)
406 PRK13648 cbiO cobalt transport 100.0 1.2E-33 2.7E-38 325.6 25.1 205 183-431 22-230 (269)
407 PRK10584 putative ABC transpor 100.0 1.1E-33 2.4E-38 318.3 24.0 198 183-424 23-227 (228)
408 PRK14235 phosphate transporter 100.0 1.1E-33 2.4E-38 325.4 24.5 208 183-431 32-250 (267)
409 PRK09984 phosphonate/organopho 100.0 7.2E-34 1.6E-38 326.5 22.8 216 183-430 17-240 (262)
410 PRK15093 antimicrobial peptide 100.0 2.6E-33 5.7E-38 330.9 28.0 215 182-431 19-247 (330)
411 PRK14270 phosphate ABC transpo 100.0 1.4E-33 3.1E-38 322.0 25.0 207 183-431 17-234 (251)
412 COG4598 HisP ABC-type histidin 100.0 1.8E-34 3.9E-39 291.1 15.2 206 878-1094 16-237 (256)
413 PRK15112 antimicrobial peptide 100.0 1.4E-33 3.1E-38 324.6 24.9 207 183-431 26-238 (267)
414 PRK10982 galactose/methyl gala 100.0 7.7E-34 1.7E-38 354.9 24.5 206 881-1095 11-220 (491)
415 TIGR01193 bacteriocin_ABC ABC- 100.0 2.2E-32 4.8E-37 356.4 39.1 210 855-1093 473-692 (708)
416 TIGR00630 uvra excinuclease AB 100.0 2.5E-32 5.3E-37 352.6 39.0 123 955-1093 789-920 (924)
417 cd03230 ABC_DR_subfamily_A Thi 100.0 8.2E-34 1.8E-38 305.2 21.2 168 857-1084 2-171 (173)
418 COG4152 ABC-type uncharacteriz 100.0 3E-34 6.5E-39 304.0 17.3 214 176-434 8-221 (300)
419 TIGR01166 cbiO cobalt transpor 100.0 6.1E-34 1.3E-38 311.3 20.4 178 881-1068 5-188 (190)
420 PRK14243 phosphate transporter 100.0 1.4E-33 3.1E-38 324.0 24.5 218 855-1093 10-243 (264)
421 KOG0055 Multidrug/pheromone ex 100.0 2.4E-34 5.3E-39 365.7 19.8 216 175-432 995-1213(1228)
422 COG4148 ModC ABC-type molybdat 100.0 1.5E-34 3.3E-39 311.2 15.2 197 187-432 15-218 (352)
423 TIGR02323 CP_lyasePhnK phospho 100.0 1.8E-33 3.9E-38 321.7 25.0 215 855-1093 3-233 (253)
424 PRK10771 thiQ thiamine transpo 100.0 1.4E-33 3.1E-38 318.2 23.7 201 188-431 17-218 (232)
425 PRK03695 vitamin B12-transport 100.0 1.1E-33 2.5E-38 321.8 23.1 198 883-1094 11-218 (248)
426 PRK13640 cbiO cobalt transport 100.0 1.6E-33 3.5E-38 326.4 24.6 208 183-431 20-231 (282)
427 PRK14256 phosphate ABC transpo 100.0 2.2E-33 4.7E-38 320.7 25.4 208 183-431 17-235 (252)
428 cd03245 ABCC_bacteriocin_expor 100.0 5.8E-34 1.2E-38 318.9 20.2 209 856-1091 3-220 (220)
429 PRK14241 phosphate transporter 100.0 1.6E-33 3.6E-38 322.8 24.3 208 183-431 17-241 (258)
430 PRK13546 teichoic acids export 100.0 4.2E-33 9E-38 318.8 27.1 230 854-1105 3-239 (264)
431 COG1132 MdlB ABC-type multidru 100.0 3.5E-34 7.5E-39 364.4 20.1 211 854-1093 327-547 (567)
432 PRK14274 phosphate ABC transpo 100.0 2E-33 4.3E-38 322.3 24.4 207 183-431 25-242 (259)
433 cd03299 ABC_ModC_like Archeal 100.0 2.3E-33 5E-38 317.0 24.5 204 185-431 14-218 (235)
434 PRK13539 cytochrome c biogenes 100.0 1E-33 2.2E-38 313.6 21.2 197 856-1082 3-199 (207)
435 PRK14269 phosphate ABC transpo 100.0 1.9E-33 4.1E-38 320.0 24.0 208 183-431 15-229 (246)
436 cd03297 ABC_ModC_molybdenum_tr 100.0 1.6E-33 3.5E-38 313.8 22.9 197 181-425 11-214 (214)
437 PRK14252 phosphate ABC transpo 100.0 3.4E-33 7.4E-38 321.3 26.2 215 855-1093 16-244 (265)
438 PRK14266 phosphate ABC transpo 100.0 2.5E-33 5.4E-38 320.0 24.8 219 855-1093 3-229 (250)
439 PRK14245 phosphate ABC transpo 100.0 1.9E-33 4.2E-38 320.8 23.9 206 183-431 16-233 (250)
440 cd03289 ABCC_CFTR2 The CFTR su 100.0 1E-33 2.2E-38 324.8 21.6 211 855-1094 2-221 (275)
441 TIGR00968 3a0106s01 sulfate AB 100.0 2.5E-33 5.4E-38 317.1 24.4 206 183-431 13-219 (237)
442 TIGR01277 thiQ thiamine ABC tr 100.0 2.6E-33 5.6E-38 311.9 24.1 199 185-426 13-212 (213)
443 COG4618 ArpD ABC-type protease 100.0 1.2E-33 2.6E-38 326.6 21.9 212 181-433 347-561 (580)
444 PRK14246 phosphate ABC transpo 100.0 2.8E-33 6.1E-38 320.0 24.9 214 855-1093 10-236 (257)
445 PRK13645 cbiO cobalt transport 100.0 1.6E-33 3.5E-38 327.9 23.2 205 183-431 24-239 (289)
446 PRK14239 phosphate transporter 100.0 2.6E-33 5.7E-38 320.2 24.6 207 183-431 18-235 (252)
447 PRK11176 lipid transporter ATP 100.0 9E-34 1.9E-38 362.4 23.1 212 855-1093 341-562 (582)
448 PRK11701 phnK phosphonate C-P 100.0 2.8E-33 6.2E-38 320.8 24.9 207 183-431 19-240 (258)
449 cd03251 ABCC_MsbA MsbA is an e 100.0 4.9E-34 1.1E-38 322.6 18.2 209 857-1093 2-220 (234)
450 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 5.4E-34 1.2E-38 323.0 18.3 210 857-1093 2-221 (238)
451 PRK10744 pstB phosphate transp 100.0 2.7E-33 5.9E-38 321.3 24.2 207 183-431 26-243 (260)
452 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.5E-33 5.4E-38 364.1 26.9 205 183-432 466-673 (686)
453 PRK14264 phosphate ABC transpo 100.0 5.8E-33 1.2E-37 324.9 27.2 221 855-1093 45-284 (305)
454 cd03254 ABCC_Glucan_exporter_l 100.0 6.8E-34 1.5E-38 320.3 18.7 211 855-1093 2-221 (229)
455 PRK10418 nikD nickel transport 100.0 4.2E-33 9E-38 318.6 25.3 207 183-431 16-229 (254)
456 COG1129 MglA ABC-type sugar tr 100.0 3.4E-33 7.4E-38 332.5 25.4 229 855-1105 8-243 (500)
457 PRK09580 sufC cysteine desulfu 100.0 3.8E-33 8.2E-38 318.2 24.9 219 856-1093 2-230 (248)
458 TIGR01189 ccmA heme ABC export 100.0 1.6E-33 3.5E-38 310.0 20.9 194 857-1080 2-197 (198)
459 PRK14244 phosphate ABC transpo 100.0 3E-33 6.4E-38 319.5 23.6 208 183-431 18-236 (251)
460 cd03229 ABC_Class3 This class 100.0 1.5E-33 3.2E-38 304.7 19.6 170 857-1084 2-177 (178)
461 PRK10790 putative multidrug tr 100.0 1.3E-33 2.7E-38 361.3 22.3 209 855-1093 340-558 (592)
462 PRK14240 phosphate transporter 100.0 4.4E-33 9.6E-38 317.9 24.3 207 183-431 16-233 (250)
463 PRK14262 phosphate ABC transpo 100.0 4.9E-33 1.1E-37 317.6 24.6 207 183-431 16-233 (250)
464 PRK14237 phosphate transporter 100.0 6.1E-33 1.3E-37 319.3 25.6 207 183-431 33-250 (267)
465 TIGR01846 type_I_sec_HlyB type 100.0 5.5E-32 1.2E-36 351.7 37.4 212 854-1093 454-675 (694)
466 PRK14272 phosphate ABC transpo 100.0 5.6E-33 1.2E-37 317.5 24.8 208 183-431 17-235 (252)
467 TIGR02324 CP_lyasePhnL phospho 100.0 4.1E-33 8.8E-38 312.9 23.2 210 856-1082 2-223 (224)
468 PRK14257 phosphate ABC transpo 100.0 6.2E-33 1.3E-37 326.4 25.8 211 183-431 95-312 (329)
469 PRK11160 cysteine/glutathione 100.0 1.2E-33 2.6E-38 358.9 21.3 211 855-1093 338-557 (574)
470 PRK09544 znuC high-affinity zi 100.0 3.6E-33 7.8E-38 317.6 22.8 198 855-1093 4-204 (251)
471 PRK14271 phosphate ABC transpo 100.0 7.5E-33 1.6E-37 319.6 25.7 208 182-431 33-250 (276)
472 COG1123 ATPase components of v 100.0 3E-33 6.5E-38 334.9 23.0 210 180-431 301-518 (539)
473 PRK14259 phosphate ABC transpo 100.0 3E-33 6.4E-38 322.1 22.1 206 183-432 26-253 (269)
474 PRK13642 cbiO cobalt transport 100.0 6.7E-33 1.5E-37 320.5 25.0 205 183-431 20-228 (277)
475 COG4604 CeuD ABC-type enteroch 100.0 3E-34 6.5E-39 294.6 12.1 216 176-432 7-225 (252)
476 PRK13545 tagH teichoic acids e 100.0 5.5E-33 1.2E-37 334.1 24.9 220 855-1106 21-240 (549)
477 PRK14251 phosphate ABC transpo 100.0 5.7E-33 1.2E-37 317.2 24.0 207 183-431 17-234 (251)
478 PRK14253 phosphate ABC transpo 100.0 5.8E-33 1.3E-37 316.7 23.8 207 182-430 15-231 (249)
479 PRK14248 phosphate ABC transpo 100.0 7E-33 1.5E-37 319.3 24.7 204 183-431 34-251 (268)
480 TIGR03771 anch_rpt_ABC anchore 100.0 3.8E-33 8.2E-38 312.6 21.8 194 889-1094 1-197 (223)
481 TIGR03269 met_CoM_red_A2 methy 100.0 4.3E-33 9.3E-38 350.6 24.8 214 857-1093 2-253 (520)
482 TIGR03375 type_I_sec_LssB type 100.0 1.5E-33 3.3E-38 366.5 21.3 211 855-1093 463-683 (694)
483 COG4181 Predicted ABC-type tra 100.0 3.7E-33 8.1E-38 280.1 19.1 202 178-423 18-226 (228)
484 PRK14249 phosphate ABC transpo 100.0 1E-32 2.2E-37 315.0 25.5 207 183-431 17-234 (251)
485 PRK13547 hmuV hemin importer A 100.0 5.4E-33 1.2E-37 319.5 23.2 214 182-431 13-243 (272)
486 COG1132 MdlB ABC-type multidru 100.0 4.9E-33 1.1E-37 353.9 25.1 209 182-432 341-552 (567)
487 PRK13540 cytochrome c biogenes 100.0 3.7E-33 8.1E-38 307.5 20.8 194 856-1079 2-197 (200)
488 cd03215 ABC_Carb_Monos_II This 100.0 3.8E-33 8.2E-38 302.7 20.5 160 883-1086 15-181 (182)
489 PRK14275 phosphate ABC transpo 100.0 7.7E-33 1.7E-37 321.2 24.4 204 183-431 52-269 (286)
490 PRK15134 microcin C ABC transp 100.0 7.5E-33 1.6E-37 348.9 26.0 221 855-1093 5-241 (529)
491 PRK14261 phosphate ABC transpo 100.0 1E-32 2.2E-37 315.4 24.5 207 183-431 19-236 (253)
492 PRK14255 phosphate ABC transpo 100.0 1.6E-32 3.4E-37 313.7 26.0 207 183-431 18-235 (252)
493 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.2E-33 1.1E-37 362.7 24.9 206 183-432 492-700 (710)
494 TIGR00958 3a01208 Conjugate Tr 100.0 2.1E-33 4.6E-38 364.4 21.1 210 855-1093 478-697 (711)
495 cd03253 ABCC_ATM1_transporter 100.0 2.4E-33 5.1E-38 317.4 18.8 208 857-1093 2-219 (236)
496 PRK14260 phosphate ABC transpo 100.0 8.6E-33 1.9E-37 316.9 23.6 207 183-431 20-242 (259)
497 cd03217 ABC_FeS_Assembly ABC-t 100.0 8.9E-33 1.9E-37 304.3 22.5 183 857-1093 2-189 (200)
498 COG4987 CydC ABC-type transpor 100.0 1.1E-33 2.4E-38 330.4 16.1 211 855-1093 336-556 (573)
499 TIGR03608 L_ocin_972_ABC putat 100.0 7.5E-33 1.6E-37 306.7 22.0 190 182-416 10-206 (206)
500 PRK11176 lipid transporter ATP 100.0 7.8E-33 1.7E-37 353.7 25.3 209 183-432 356-567 (582)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-255 Score=2360.82 Aligned_cols=1348 Identities=54% Similarity=0.913 Sum_probs=1258.5
Q ss_pred CChhHhhHHHHHhhCCChhhhhhhccccccCCCcccceeeccCCCChhhhHHHHHHHHhhcccCHHHHHHHHHHHHhhcC
Q 000506 50 DDDEEELRWAAIERLPTYDRLRRGMLSQLGDDGKVVRREVNVKKLGMQDRKQLRESILKLVEEDNDKFLRKLRERIDRVG 129 (1458)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 129 (1458)
+||||+|||||+|||||++| +++.+.. ++ ++|+.++++.|+..++++..+..++|+++++.+++++++++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~-~~-----~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~- 81 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIF-ES-----EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV- 81 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhc-cC-----cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc-
Confidence 45999999999999999999 6665321 11 58999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEeeeeEEEEEecCCCCCCCchHHHHHHHHhhhhhhcccccccccceeeeceeeEEeCCeEEEEEcCCCCcH
Q 000506 130 IDIPKIEIRYEHLNIQGEVHIGSRAIPTLPNAVINIAENVLGSLRILPSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGK 209 (1458)
Q Consensus 130 ~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGK 209 (1458)
+.|.++++++++.+++++..| ||+.|...+.++..+...+.. ++.+.+||+|+||.++||||++++|||||||
T Consensus 82 -~~p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ 154 (1391)
T KOG0065|consen 82 -ELPTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGK 154 (1391)
T ss_pred -cCCceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCch
Confidence 899999999999999998876 899999888888776555432 4566789999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHH
Q 000506 210 TTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREK 289 (1458)
Q Consensus 210 STLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~ 289 (1458)
||||++|+|.++......|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.+++ +..|+|+
T Consensus 155 ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~ 231 (1391)
T KOG0065|consen 155 TTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREK 231 (1391)
T ss_pred HHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHH
Confidence 9999999999988777789999999999999989999999999999999999999999999999998887 6666665
Q ss_pred hcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCC
Q 000506 290 EAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEIS 369 (1458)
Q Consensus 290 ~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPt 369 (1458)
.. .++|++++++||++|+||+|||+++||+||||||||+||+++++++++++|||+|
T Consensus 232 ~~-----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t 288 (1391)
T KOG0065|consen 232 LA-----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEIT 288 (1391)
T ss_pred HH-----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccc
Confidence 32 2678999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHH
Q 000506 370 TGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVAD 449 (1458)
Q Consensus 370 sgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad 449 (1458)
+|||++|+.++++.||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||+||+|+++||
T Consensus 289 ~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~AD 368 (1391)
T KOG0065|consen 289 RGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTAD 368 (1391)
T ss_pred ccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhHHhhhcCCcCCcCCCccccccCCCCcchHHHHHHHHHH
Q 000506 450 FLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQLANDLAVPYDKSRTHPAALVKNKYGISNMDLFRACFGR 529 (1458)
Q Consensus 450 ~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R 529 (1458)
|++++++++++.++|.++..|+.+.+++||.+.|.+++.++++..+++.++++.+.++.++..++|.+++|+|+++|+.|
T Consensus 369 fLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R 448 (1391)
T KOG0065|consen 369 FLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIR 448 (1391)
T ss_pred HHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhccc
Q 000506 530 EWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADGAKFYGALFFSLINLMFNGLAELAFTVFRLPVFFKQRD 609 (1458)
Q Consensus 530 ~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~ 609 (1458)
+|++++||.+++++++++.+++|+++|++|+++.+ .+..++..+.|++||++++.+|++++|+.++++++|||+|||+
T Consensus 449 ~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~ 526 (1391)
T KOG0065|consen 449 EFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRD 526 (1391)
T ss_pred HHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhc
Confidence 99999999999999999999999999999999985 5566778899999999999999999999999999999999999
Q ss_pred CcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Q 000506 610 HLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAASRLFRQYLAFFAVNSMALSLFRFIGSIGRTEVVANTLG 689 (1458)
Q Consensus 610 ~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~ 689 (1458)
..|||||+++++.+++++|..++++++|++++||++|+.|++++||++++++++++++++++||+++++++++.+|+.+|
T Consensus 527 ~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g 606 (1391)
T KOG0065|consen 527 LSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIG 606 (1391)
T ss_pred ccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHHhhcCCCCCCCCCCC---------CCc---ccchhhhh
Q 000506 690 TFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVINEFLDERWSKPVSDP---------KIH---EPTVGKLL 757 (1458)
Q Consensus 690 ~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~---------~~~---~~~~g~~~ 757 (1458)
++.++++++++||+|+..+||+||+|++|++|++|+++++++|||++++|+|.+.++ ..| ..+.|..+
T Consensus 607 ~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~ 686 (1391)
T KOG0065|consen 607 GILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDY 686 (1391)
T ss_pred HHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceE
Confidence 999999999999999999999999999999999999999999999999999973211 112 36789999
Q ss_pred hhccCcc-----ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeecccccccccCCCCCCCCCccccccc
Q 000506 758 LKSRGFF-----TVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGDKKKKASGQPGTEDTDMSVRSS 832 (1458)
Q Consensus 758 l~~~g~~-----~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (1458)
++.+++. ...+|+|+++|+++||.++|++++++++.|+++.++.++.+..+............ . ....
T Consensus 687 v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~-~-----~~~~- 759 (1391)
T KOG0065|consen 687 VSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAG-S-----SSEI- 759 (1391)
T ss_pred EecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhcc-c-----cccc-
Confidence 9999988 77789999999999999999999999999999999988887766522111110000 0 0000
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHh
Q 000506 833 SENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMD 912 (1458)
Q Consensus 833 ~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~ 912 (1458)
+......+.+.++++.|+.+..++++||.|.++++.+++.+| +++++|+||||.++||.+|||||+||||||||||
T Consensus 760 -~~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLd 835 (1391)
T KOG0065|consen 760 -EKLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLD 835 (1391)
T ss_pred -cccccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHH
Confidence 000111111456788999999999999999999988877766 6789999999999999999999999999999999
Q ss_pred hhcCCcCCCceeeEEEECCeeCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCC
Q 000506 913 VLAGRKTGGYTEGDISISGYPKNQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVEL 992 (1458)
Q Consensus 913 ~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L 992 (1458)
+||||+++|.++|+|+|||+|+++..++|.+|||+|+|+|.+.+||||+|.|+|+||++.+++.+++.++||++++.++|
T Consensus 836 vLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL 915 (1391)
T KOG0065|consen 836 VLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLEL 915 (1391)
T ss_pred HHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999899999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccCCCCCCCCHHHHHHHHHHHHHhhCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHH
Q 000506 993 EPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDI 1071 (1458)
Q Consensus 993 ~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p-~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i 1071 (1458)
++++|.+||.+| +|||.+|||||+||+||++|| .||||||||||||+++|..|++++|+++++|+||||||||||.++
T Consensus 916 ~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~i 994 (1391)
T KOG0065|consen 916 KEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDI 994 (1391)
T ss_pred hhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHH
Confidence 999999999999 999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhhceEEEEecCcEEEEeCCCCcchHHHHHHHHhCCCCCCCCCCCCCcceeeeccChhhhhhhhhhHHHHHhhCHHHHH
Q 000506 1072 FEAFDELLLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAEAQLNVDFADIYVRSSLYQR 1151 (1458)
Q Consensus 1072 ~~~~D~vlll~~gG~~~~~G~~~~~~~~~~~~f~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~ 1151 (1458)
++.||++++|++||+++|+||+|++++++++||++++|++ |++..||||||||+++.+.+...+.||++.|++|+++++
T Consensus 995 fe~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~ 1073 (1391)
T KOG0065|consen 995 FEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKR 1073 (1391)
T ss_pred HHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHHHhccHHHHH
Confidence 9999999999999999999999999999999999999886 555559999999999999998889999999999999999
Q ss_pred HHHHHHHhcCCCCC-CCCCCCCCCCCchHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHH
Q 000506 1152 NEELIKELSTPAPG-SSDLYFPTQYSQPFLIQCKACFWKQRQSYWRDPQYNALRFAVTIVVGLLFGLIFWDKGQKTKKQQ 1230 (1458)
Q Consensus 1152 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~ 1230 (1458)
+++++++++.++++ +.+..++++|++|+|.|++.|+|||+++|||+|+|+.+|++++++.||++|++||++|+ ++|
T Consensus 1074 ~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q 1150 (1391)
T KOG0065|consen 1074 NKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQ 1150 (1391)
T ss_pred HHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHH
Confidence 99999999999988 78888899999999999999999999999999999999999999999999999999995 789
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCcc
Q 000506 1231 DLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAW 1310 (1458)
Q Consensus 1231 ~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~~~g~~~ 1310 (1458)
|++|.+|++|+++++.+.+++..++|.+..||.+++|||++|||||.||++||+++|+||.++++++|++|+|+|+||++
T Consensus 1151 ~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~ 1230 (1391)
T KOG0065|consen 1151 GLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYW 1230 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchh
Confidence 99999999999999999998888889999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHH
Q 000506 1311 KAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGL 1390 (1458)
Q Consensus 1311 ~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l 1390 (1458)
++.+|+||+++++++.+|++++|||+.+++||.++|+++++++++++++||||++|++.||.||+||||+||++|.++|+
T Consensus 1231 ~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gl 1310 (1391)
T KOG0065|consen 1231 TASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGL 1310 (1391)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCcccccccC-----CCCcccHHHHHHhhhC----CccCChhhHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000506 1391 VTSQVGDIEGNVEIPG-----STATMTVKQLLKDSFG----FKYDFLPVVAVVKLVWLLAFVFVFTLAITLINFQRR 1458 (1458)
Q Consensus 1391 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~g----~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1458 (1458)
+..++||.+..|...+ +++++||++|++++|| |.++.......+..+|.+++.+++.+++|+.|||||
T Consensus 1311 i~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1311 ISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred HHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 9999999987764332 2346899999999999 999999999999999999999999999999999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=3e-238 Score=2369.52 Aligned_cols=1417 Identities=61% Similarity=1.059 Sum_probs=1275.7
Q ss_pred ccccccCC---C----CCCChhHhhHHHHHhhCCChhhhhhhcccccc-CCCccc---ceeeccCCCChhhhHHHHHHHH
Q 000506 39 SSNAFSRS---Q----RDDDDEEELRWAAIERLPTYDRLRRGMLSQLG-DDGKVV---RREVNVKKLGMQDRKQLRESIL 107 (1458)
Q Consensus 39 ~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~~~~~~~~~~~~ 107 (1458)
.+++|++. + ..|||||+|+|||+||||||+|+|++++.+.. ++|... ..++|+++|+.++++.+++++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (1470)
T PLN03140 23 MEDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVF 102 (1470)
T ss_pred hhhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHHHHHhhh
Confidence 36788542 1 36789999999999999999999999996431 111111 1259999999999999999999
Q ss_pred hhcccCHHHHHHHHHHHHhhcCCCCCceEEEEeeeeEEEEEecCCCCCCCchHHHHHHHHhhhhhhcccccccccceeee
Q 000506 108 KLVEEDNDKFLRKLRERIDRVGIDIPKIEIRYEHLNIQGEVHIGSRAIPTLPNAVINIAENVLGSLRILPSKKRKIQILK 187 (1458)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~ 187 (1458)
+++++|++++++++++|.+++|+++|+++|+|+||+|++++.++.+.+||++|.+.+.++.+....+...+++.+++||+
T Consensus 103 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~ 182 (1470)
T PLN03140 103 KVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILK 182 (1470)
T ss_pred cccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceecc
Confidence 99999999999999999999999999999999999999999999999999999999888776543332233445688999
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCCHHHHHHH
Q 000506 188 DVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMTVRETMDF 267 (1458)
Q Consensus 188 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f 267 (1458)
|+||.++|||+++|+||||||||||||+|+|+++++.+++|+|.+||+++++...++.++||+|+|.|++++||+|||.|
T Consensus 183 ~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f 262 (1470)
T PLN03140 183 DASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDF 262 (1470)
T ss_pred CCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHH
Confidence 99999999999999999999999999999999988777899999999998877667889999999999999999999999
Q ss_pred hhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCCChHHH
Q 000506 268 SGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGVSGGQK 347 (1458)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGLSGGqk 347 (1458)
+++|++.+.++++..+..+++++.++.|+++++.+||++..++.+.+..++.+++.+||++|+||.||+.+.||||||||
T Consensus 263 ~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGer 342 (1470)
T PLN03140 263 SARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQK 342 (1470)
T ss_pred HHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccc
Confidence 99998877666666677788888888888899999999988887778889999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEEEEcCh
Q 000506 348 KRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIVYQGPR 427 (1458)
Q Consensus 348 kRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~~G~~ 427 (1458)
|||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+||+
T Consensus 343 kRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~ 422 (1470)
T PLN03140 343 KRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPR 422 (1470)
T ss_pred eeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCH
Confidence 99999999999999999999999999999999999999998866889999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhHHhhhcCCcCCcCCCc
Q 000506 428 EKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQLANDLAVPYDKSRTHP 507 (1458)
Q Consensus 428 ~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~~~~~~~~~~~~ 507 (1458)
+++.+||+++||+||+++++|||+++++++++++++|.+...|+++.++++|+++|++++.++++.++++.|.++.+.++
T Consensus 423 ~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 502 (1470)
T PLN03140 423 DHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHK 502 (1470)
T ss_pred HHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhccc
Confidence 99999999999999999999999999999988888887777888889999999999999999988888877776666666
Q ss_pred cccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhhHHHHHHHHHHHH
Q 000506 508 AALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADGAKFYGALFFSLINLM 587 (1458)
Q Consensus 508 ~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~lff~l~~~~ 587 (1458)
.....++|..++++|+++|++|++++++||+..+++|+++.+++|+++|++|++++++..+..++..+.|++||+++.++
T Consensus 503 ~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~ 582 (1470)
T PLN03140 503 AALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINM 582 (1470)
T ss_pred ccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 66667789999999999999999999999999999999999999999999999998776555667788999999999999
Q ss_pred HHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHH
Q 000506 588 FNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAASRLFRQYLAFFAVNSM 667 (1458)
Q Consensus 588 ~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~ 667 (1458)
+++++++..++.+||||+|||+.+||++|+|+++++++++|+.++++++|++++|||+|+.+++++||.|++++++++++
T Consensus 583 ~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~ 662 (1470)
T PLN03140 583 FNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQM 662 (1470)
T ss_pred HHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 000506 668 ALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVINEFLDERWSKPVSDPK 747 (1458)
Q Consensus 668 ~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~ 747 (1458)
+.++|++++++++++.+|+.+++++++++++++||++++++||+||+|++|+||+.|+++|+++|||.+.+|.+..+...
T Consensus 663 ~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~ 742 (1470)
T PLN03140 663 AAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDN 742 (1470)
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988865322211
Q ss_pred CcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeecccccccccCCCC-----CC
Q 000506 748 IHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGDKKKKASGQP-----GT 822 (1458)
Q Consensus 748 ~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 822 (1458)
..+.|..+|+.+|+...+.|+|++++++++|+++|+++++++++|.++.......+..+. .+........ ..
T Consensus 743 --~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 819 (1470)
T PLN03140 743 --STRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEET-AEEMEGEEDSIPRSLSS 819 (1470)
T ss_pred --CcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccc-hhhhhcccccccccccc
Confidence 357899999999999999999999999999999999999999999987655544432211 0000000000 00
Q ss_pred CC-Cc---cc---cc-c-c-----CCC-CCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccc
Q 000506 823 ED-TD---MS---VR-S-S-----SEN-VGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDV 887 (1458)
Q Consensus 823 ~~-~~---~~---~~-~-~-----~~~-~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~v 887 (1458)
+. .. .. .. . . ... .......+.+++.+|+.|.+++|+||+|+++++.+.+..+...+++++|+||
T Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~v 899 (1470)
T PLN03140 820 ADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREV 899 (1470)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCc
Confidence 00 00 00 00 0 0 000 0001122345677889999999999999999877666555555667899999
Q ss_pred eeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcccccceEEEEccCCCCCCCCCHHHHHHHHHh
Q 000506 888 SGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQATFARVSGYCEQNDIHSPHVTVYESLLFSAW 967 (1458)
Q Consensus 888 s~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~ 967 (1458)
|++++|||++|||||||||||||||+|+|+.+++..+|+|.+||++..+..+++.+|||+|+|.+++.+||+|+|.|++.
T Consensus 900 s~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~ 979 (1470)
T PLN03140 900 TGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAF 979 (1470)
T ss_pred EEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999987667899999999987655567789999999999999999999999998
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHH
Q 000506 968 LRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1047 (1458)
Q Consensus 968 lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~ 1047 (1458)
+|.+.+.+.++++++++++++.++|.+++|+.+|.+++++|||||||||+||+||+.+|+||||||||||||+.++..++
T Consensus 980 lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~ 1059 (1470)
T PLN03140 980 LRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1059 (1470)
T ss_pred hCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHH
Confidence 88776666677778899999999999999999998888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCCcchHHHHHHHHhCCCCCCCCCCCCCcceeeecc
Q 000506 1048 RTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEIS 1127 (1458)
Q Consensus 1048 ~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~~~~~~~~~~f~~~~g~~~~~~~~npad~~l~v~ 1127 (1458)
+.|++++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|+++||+++||||||||++
T Consensus 1060 ~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~ 1139 (1470)
T PLN03140 1060 RTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVS 1139 (1470)
T ss_pred HHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhh
Confidence 99999998999999999999977899999999999889999999999888999999999988888999999999999999
Q ss_pred ChhhhhhhhhhHHHHHhhCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcChhhHHHHHHH
Q 000506 1128 TPTAEAQLNVDFADIYVRSSLYQRNEELIKELSTPAPGSSDLYFPTQYSQPFLIQCKACFWKQRQSYWRDPQYNALRFAV 1207 (1458)
Q Consensus 1128 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~ 1207 (1458)
+.+.+...+.||++.|++|++++++++++++++.++++.++..++++|++++|+|++.|+||+++++||||.|+.+|+++
T Consensus 1140 ~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~ 1219 (1470)
T PLN03140 1140 SLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFF 1219 (1470)
T ss_pred cccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHH
Confidence 87666666679999999999999999888888777666666666788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhCCCCCHHHHHHHHHHHH
Q 000506 1208 TIVVGLLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIE 1287 (1458)
Q Consensus 1208 ~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e 1287 (1458)
++++|+++|++||+++++..+++++++++|++|++++|+++.++++++|.+..||+||+|||++|+|++++|++|++++|
T Consensus 1220 ~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~e 1299 (1470)
T PLN03140 1220 TLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCE 1299 (1470)
T ss_pred HHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHH
Confidence 99999999999999998777789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhcccccCC
Q 000506 1288 LIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPR 1367 (1458)
Q Consensus 1288 ~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~ 1367 (1458)
+|+.++++++|++|+|||+||++++.+||||+++++++.++++++|+++++++||.++|+.++++++++|++||||++|+
T Consensus 1300 iP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~ 1379 (1470)
T PLN03140 1300 IPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPR 1379 (1470)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhhhhhhCHHHHHHHHHHHHhhCCCcccccccCCCCcccHHHHHHhhhCCccCChhhHHHHHHHHHHHHHHHHH
Q 000506 1368 VQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLKDSFGFKYDFLPVVAVVKLVWLLAFVFVFT 1447 (1458)
Q Consensus 1368 ~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~ 1447 (1458)
++||+||+|+||+||++|+++|+++|||+|.+.+|.+||..+..++++|++++|||+++++|++++++++|+++|+++++
T Consensus 1380 ~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~ 1459 (1470)
T PLN03140 1380 PKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFAFIFA 1459 (1470)
T ss_pred HHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998877777643346899999999999999999999999999999999999
Q ss_pred HHHHhhcccCC
Q 000506 1448 LAITLINFQRR 1458 (1458)
Q Consensus 1448 ~~l~~~~~~~r 1458 (1458)
+++|++|||||
T Consensus 1460 ~~~~~~~~q~r 1470 (1470)
T PLN03140 1460 FCIRTLNFQTR 1470 (1470)
T ss_pred HHHHHhhcccC
Confidence 99999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.1e-187 Score=1890.04 Aligned_cols=1289 Identities=31% Similarity=0.537 Sum_probs=1065.4
Q ss_pred cCHHHHHHHHHHHHhhcCCCCC--ceEEEEeeeeEEEEEecCCCCCCCchHHHHHHHHhhhhhhcccccccccceeeece
Q 000506 112 EDNDKFLRKLRERIDRVGIDIP--KIEIRYEHLNIQGEVHIGSRAIPTLPNAVINIAENVLGSLRILPSKKRKIQILKDV 189 (1458)
Q Consensus 112 ~~~~~~~~~~~~~~~~~g~~~p--~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 189 (1458)
.|++++++.++++.++.+...| +++|+|+||+|++ ...+...+||++|.+.+....+...+. ..+++++++||+|+
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4566676655555555555555 9999999999999 444666789999988776664433221 12334567899999
Q ss_pred eeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-CCcccEEEECCeecCCcc--ccceEEEecCCCCCCCCCCHHHHHH
Q 000506 190 SGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD-LKLTGKIKYCGHEFKEFV--PQRTCAYISQNDLHFGEMTVRETMD 266 (1458)
Q Consensus 190 s~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~-~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 266 (1458)
|+.++|||+++|+||||||||||||+|+|+.++. ...+|+|.+||+++++.. .++.++||+|+|.|++.+||+||+.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 9999999999999999999999999999997431 124999999999876432 3456999999999999999999999
Q ss_pred HhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCCChHH
Q 000506 267 FSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGVSGGQ 346 (1458)
Q Consensus 267 f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGLSGGq 346 (1458)
|+++++.+..... ...+.++ .+...+.+++.+||++++||+||++..|||||||
T Consensus 161 f~~~~~~~~~~~~---~~~~~~~-----------------------~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPD---GVSREEY-----------------------AKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCC---CCCHHHH-----------------------HHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 9988764321100 0011110 0122456899999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEEEEcC
Q 000506 347 KKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIVYQGP 426 (1458)
Q Consensus 347 kkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~~G~ 426 (1458)
||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999876678999999999999999999999999999999999
Q ss_pred hhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhHHhhhcCCcCCc---
Q 000506 427 REKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQLANDLAVPYDKS--- 503 (1458)
Q Consensus 427 ~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~~~~~~~~--- 503 (1458)
++++.+||+++||+||++.|++||++++++++++ +++.. .+.....++++++++|++++.++++.++++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~-~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPG-YEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hcccc-ccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999987643 22211 111223678999999999988777766654322110
Q ss_pred ------------CCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCcccc
Q 000506 504 ------------RTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVAD 571 (1458)
Q Consensus 504 ------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~ 571 (1458)
+..+.....++|..++|+|++.|++|.++.++||+..+..++++.+++|+++|++|++++.+.. +
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~~---~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNTS---D 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCch---h
Confidence 0001122345688999999999999999999999999999999999999999999999886443 4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhH
Q 000506 572 GAKFYGALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAA 651 (1458)
Q Consensus 572 ~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~ 651 (1458)
.+.+.|++||++++.++.++.++...+.+|++|+|||.+++|++++|+++++++++|+.++.+++|++++|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 56789999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHH
Q 000506 652 SRLFRQYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVI 731 (1458)
Q Consensus 652 ~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 731 (1458)
++||.+++++++++.++.++++++++++++..+|+.+++++++++++++||+++.++||+||+|++|+||+.|+++++++
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCC--CC----------CCCc---------ccchhhhhhhc-cCccccchhhHHHHHHHHHHHHHHHHHHH
Q 000506 732 NEFLDERWSKPV--SD----------PKIH---------EPTVGKLLLKS-RGFFTVNYWYWICIGALFGFTILFNILFI 789 (1458)
Q Consensus 732 nef~~~~~~~~~--~~----------~~~~---------~~~~g~~~l~~-~g~~~~~~~~w~~~g~l~g~~i~f~~l~~ 789 (1458)
|||.+..+.|.. |. ...| +.+.|.++|+. +++ ...|.|+++|++++++++|.++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~--~~~~~w~n~gil~~~~v~f~~~~~ 687 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQY--YNSHKWRNFGIIIGFTVFFFFVYI 687 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCc--ccchhhHHHHHHHHHHHHHHHHHH
Confidence 999999998851 11 1112 23578888884 444 456899999999999999999999
Q ss_pred HHHHhhCCCCCCCCceeecccccccccCCCCCCCCCcccccccCC----CCCCCCCCCCCCcccC--CCCeEEEEeeeee
Q 000506 790 AAIQFLNPLGKAKPTVIEEDGDKKKKASGQPGTEDTDMSVRSSSE----NVGTTGHGPKKGMVLP--FQPLSLAFHHVNY 863 (1458)
Q Consensus 790 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~--~~~~~l~~~~l~~ 863 (1458)
++++|.++..........+..............+.....+++..+ ...............| .....++|+|++|
T Consensus 688 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~ 767 (1394)
T TIGR00956 688 LLTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTY 767 (1394)
T ss_pred HHHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCceEEEEeeEE
Confidence 999998865544433322221100000000000000000000000 0000000000000001 1123589999999
Q ss_pred EeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC-ceeeEEEECCeeCCcccccce
Q 000506 864 SVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YTEGDISISGYPKNQATFARV 942 (1458)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~ 942 (1458)
.++.+ .+++++|+|||++++|||++||||||||||||||++|+|+.+++ +.+|+|.+||++... .+++.
T Consensus 768 ~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~ 837 (1394)
T TIGR00956 768 EVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRS 837 (1394)
T ss_pred EecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcc
Confidence 88532 13467999999999999999999999999999999999997644 467999999998753 46788
Q ss_pred EEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHH
Q 000506 943 SGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVEL 1022 (1458)
Q Consensus 943 ~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL 1022 (1458)
+|||+|+|.+++.+||+|+|.|++.+|.+.+.+.++++++++++++.++|.+++|+.+|.++. +|||||||||+||+||
T Consensus 838 i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL 916 (1394)
T TIGR00956 838 IGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVEL 916 (1394)
T ss_pred eeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHH
Confidence 999999999999999999999999988776666777778899999999999999999986544 8999999999999999
Q ss_pred hhCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCCcchHHHH
Q 000506 1023 VANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRQSQKLV 1101 (1458)
Q Consensus 1023 ~~~p~-illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~~~~~~~~ 1101 (1458)
+.+|+ ||||||||||||+.++..++++|++++++|+|||||+|||+..+++.||++++|++||+++|.|+.++++++++
T Consensus 917 ~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~ 996 (1394)
T TIGR00956 917 VAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTII 996 (1394)
T ss_pred HcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHH
Confidence 99997 99999999999999999999999999888999999999999777889999999998889999999988888999
Q ss_pred HHHHhCCCCCCCCCCCCCcceeeeccChhhhhhhhhhHHHHHhhCHHHHHHHHHHHHhcCCCCCCC---CCCCCCCCCch
Q 000506 1102 EYFEAVPGVPRITNGYNPATWMLEISTPTAEAQLNVDFADIYVRSSLYQRNEELIKELSTPAPGSS---DLYFPTQYSQP 1178 (1458)
Q Consensus 1102 ~~f~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 1178 (1458)
+||+++ |.++||+++|||||+||+++...+.....||++.|++|++++++.+.+++...+..... +.....+|+.|
T Consensus 997 ~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 1075 (1394)
T TIGR00956 997 NYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAAS 1075 (1394)
T ss_pred HHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCC
Confidence 999987 77679999999999999998655444456899999999998887776665543322111 11122468999
Q ss_pred HHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000506 1179 FLIQCKACFWKQRQSYWRDPQYNALRFAVTIVVGLLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVV 1258 (1458)
Q Consensus 1179 ~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~ 1258 (1458)
||+|++.|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++. +.+++|.|
T Consensus 1076 ~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~-~~~~~~~f 1151 (1394)
T TIGR00956 1076 LWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPL-IQQYLPPF 1151 (1394)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHH-HHHhhhhH
Confidence 9999999999999999999999999999999999999999999986 5789999999999998887776 34567888
Q ss_pred HHhhhHH-HHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccHHH-------HHHHHHHHHHHHHHHH
Q 000506 1259 STERTVF-YRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKR-------FFWFLYMVMMSFMQFT 1330 (1458)
Q Consensus 1259 ~~er~v~-~rE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~-------f~~~~~~~~~~~~~~~ 1330 (1458)
..||.+| +|||++|+|++.+|++|++++|+|+.++++++|++|+|||+||++++.. |++|+++++++.++++
T Consensus 1152 ~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 1231 (1394)
T TIGR00956 1152 VAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMFFLYFS 1231 (1394)
T ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHHHHHHH
Confidence 8888886 8999999999999999999999999999999999999999999988866 9999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHHhhCCCcccccc------
Q 000506 1331 LYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEI------ 1404 (1458)
Q Consensus 1331 ~~g~~~~~~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~~------ 1404 (1458)
++|+++++++|+.++|+.+++++++++++||||++|+++||+||+|++|+||++|+++|++.|||+|.+..|..
T Consensus 1232 s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~~e~~~f 1311 (1394)
T TIGR00956 1232 TLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKVKELLTF 1311 (1394)
T ss_pred HHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCcccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999998754411
Q ss_pred --c-CCCC----------------------------cccHHHHHHhhhCCccCChhhHHHHHHHHHHHHHHHHHHHHHhh
Q 000506 1405 --P-GSTA----------------------------TMTVKQLLKDSFGFKYDFLPVVAVVKLVWLLAFVFVFTLAITLI 1453 (1458)
Q Consensus 1405 --~-~~~~----------------------------~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~ 1453 (1458)
| |.+| ..+..+|++ .+|+++++.|+|++++++|++++ ++.++++.+.
T Consensus 1312 ~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~-~~~~~~~~~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1312 NPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLE-PISSKYSGRWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred cCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHH-HcCCcccccccchhhhhHHHHHH-HHHHHhhheE
Confidence 1 1001 113455655 57999999999999999999988 7777777664
No 4
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=8.9e-95 Score=918.53 Aligned_cols=585 Identities=24% Similarity=0.414 Sum_probs=487.6
Q ss_pred CCeEEEEeeeeeEeecchh----------------hhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhc
Q 000506 852 QPLSLAFHHVNYSVDMPAE----------------MKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLA 915 (1458)
Q Consensus 852 ~~~~l~~~~l~~~~~~~~~----------------~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~ 915 (1458)
.+++++|.|++|+++.... .++.....+++++|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 3678999999999864320 011122334578999999999999999999999999999999999
Q ss_pred CCcCCCceeeEEEECCeeCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc
Q 000506 916 GRKTGGYTEGDISISGYPKNQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL 995 (1458)
Q Consensus 916 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~ 995 (1458)
|+.++...+|+|.+||++... ..++.+|||+|++.+++.+||+|++.|++.++.+...+.++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~-~~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTK-QILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECch-hhccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 997654468999999998653 2346799999999999999999999999887766555666677889999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhh
Q 000506 996 TNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1075 (1458)
Q Consensus 996 ~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~ 1075 (1458)
+|+.+|+...++||||||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999988888999999999999999999999999999999999999999999999998889999999999987789999
Q ss_pred ceEEEEecCcEEEEeCCCCcchHHHHHHHHhCCCCCCCCCCCCCcceeeeccChhhhh---------hhhhhHHHHHhhC
Q 000506 1076 DELLLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAEA---------QLNVDFADIYVRS 1146 (1458)
Q Consensus 1076 D~vlll~~gG~~~~~G~~~~~~~~~~~~f~~~~g~~~~~~~~npad~~l~v~~~~~~~---------~~~~~~~~~~~~s 1146 (1458)
|++++|++ |+++|.|+. +++.+||+++ |. +||+++|||||++|+++...+. .......+.|+++
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~-G~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESV-GF-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHC-CC-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 799999996 6799999999 55 5899999999999998753210 0011233455432
Q ss_pred HHHHHHHHHHHHh--cC-CCC-----CCCCCC-CCCCCCchHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHH
Q 000506 1147 SLYQRNEELIKEL--ST-PAP-----GSSDLY-FPTQYSQPFLIQCKACFWKQRQSYWRDPQYNALRFAVTIVVGLLFGL 1217 (1458)
Q Consensus 1147 ~~~~~~~~~~~~~--~~-~~~-----~~~~~~-~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1217 (1458)
. .++.++.++.. .. +.. ..+... ..+.+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111111 00 000 000000 11235578999999999999998 99999999999999999999999
Q ss_pred HhccCCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 000506 1218 IFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVV 1297 (1458)
Q Consensus 1218 ~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~ 1297 (1458)
+||+++ ..+++++.|++|+++++.++.+++++++.|+.||+||+|||++|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999874 467999999999999998888888889999999999999999999999999999999999999999999
Q ss_pred HHhhhhhccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhh
Q 000506 1298 YVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWY 1377 (1458)
Q Consensus 1298 ~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~ 1377 (1458)
|.+|+|||+||++++.+||+|+++++++.++++++|+++++++||.++|+.++++++.++++|+||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hhhCHHHHHHHHHHHHhhCCCccc---ccccCCCC--cccHHHHHHhhhCCccCChhhHHHHHHHHHHHHHHHHHHHHHh
Q 000506 1378 YWLSPVAWTLYGLVTSQVGDIEGN---VEIPGSTA--TMTVKQLLKDSFGFKYDFLPVVAVVKLVWLLAFVFVFTLAITL 1452 (1458)
Q Consensus 1378 ~~isp~~y~~~~l~~~~~~~~~~~---~~~~~~~~--~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~ 1452 (1458)
+|+||++|+++|++.|||++.+.. ..|++..+ ...|. ++. ..+++....|.++++|++|+++|++++++++++
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~-~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~ 656 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCK-FVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRR 656 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCc-cch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999875431 12222110 11121 222 233345568999999999999999999999998
Q ss_pred hcc
Q 000506 1453 INF 1455 (1458)
Q Consensus 1453 ~~~ 1455 (1458)
+||
T Consensus 657 ~~~ 659 (659)
T PLN03211 657 IKH 659 (659)
T ss_pred ccC
Confidence 876
No 5
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.3e-95 Score=912.73 Aligned_cols=581 Identities=33% Similarity=0.582 Sum_probs=506.6
Q ss_pred CCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC-ceeeEEEEC
Q 000506 852 QPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YTEGDISIS 930 (1458)
Q Consensus 852 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~ 930 (1458)
.+..+.|+|+++..+.+.. ..+++|+||||+++|||++|||||||||||||||+|+|+..++ ..+|+|++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3467899999998864321 3578999999999999999999999999999999999998764 789999999
Q ss_pred CeeCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 931 GYPKNQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 931 g~~~~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
|++.+...+++.+|||+|||.++|++||+|+|.|+|.+|+|.+.+.++++++|+++++.+||.+++|+++|+++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 99888888999999999999999999999999999999999988999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
||||||+||.+|+.||+||||||||||||+.++..++++|+++|++|+|||||+|||+.+++++||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 699999
Q ss_pred CCCCcchHHHHHHHHhCCCCCCCCCCCCCcceeeeccChh--hhhhh--hh--hHHHHHh-hCHHHHHHHHHHHHhcCCC
Q 000506 1091 GPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPT--AEAQL--NV--DFADIYV-RSSLYQRNEELIKELSTPA 1163 (1458)
Q Consensus 1091 G~~~~~~~~~~~~f~~~~g~~~~~~~~npad~~l~v~~~~--~~~~~--~~--~~~~~~~-~s~~~~~~~~~~~~~~~~~ 1163 (1458)
|+. +++.+||+++ |.| ||+.+|||||++|+.+.. .+... .. ...+.++ .+...+...+..+.+...
T Consensus 253 G~~----~~~~~ff~~~-G~~-~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 325 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GFP-CPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS- 325 (613)
T ss_pred cCH----HHHHHHHHhC-CCC-CCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhHHHHhhhcccc-
Confidence 997 6799999999 665 999999999999998842 11100 00 1111111 111111110001111111
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHHHHHHHH
Q 000506 1164 PGSSDLYFPTQYSQPFLIQCKACFWKQRQSYWRDPQYNALRFAVTIVVGLLFGLIFWDKGQKTKKQQDLQNLFGALYCAV 1243 (1458)
Q Consensus 1164 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~ 1243 (1458)
. ..+.....+||.|+..+++|.+++.+|||.+...|+++.+++|+++|++||++++ +..+++++.|++|+.+
T Consensus 326 ---~--~~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~~ 397 (613)
T KOG0061|consen 326 ---K--KVEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFIL 397 (613)
T ss_pred ---c--ccccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHHH
Confidence 1 1111127899999999999999999999999999999999999999999999976 4566779999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccHHHHHHHHHHHH
Q 000506 1244 FFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVM 1323 (1458)
Q Consensus 1244 ~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1323 (1458)
.+..+..+...++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++...|++|+++++
T Consensus 398 ~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~ 477 (613)
T KOG0061|consen 398 SFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIIL 477 (613)
T ss_pred HHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Confidence 99988888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHHhhCCCccccc
Q 000506 1324 MSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVE 1403 (1458)
Q Consensus 1324 ~~~~~~~~~g~~~~~~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~ 1403 (1458)
+..+.++++|++++++.||...|..+++++...+++|+||+++.++||+||+|++|+|+++|++||++.|||++....|.
T Consensus 478 ~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~ 557 (613)
T KOG0061|consen 478 LSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCF 557 (613)
T ss_pred HHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997333331
Q ss_pred ccC-CCCcccHHHHHHhhhCCccCChhhHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 000506 1404 IPG-STATMTVKQLLKDSFGFKYDFLPVVAVVKLVWLLAFVFVFTLAITLINFQR 1457 (1458)
Q Consensus 1404 ~~~-~~~~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1457 (1458)
..+ ..+..+..++++ .++++.++.|.++.++++|.++|++++++++++....+
T Consensus 558 ~~~~~~~~~~~~~~l~-~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 558 LSGNLCCESTGEDVLK-QLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred cCcCCcccccHHHHHH-hcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 111 123455666665 68999999999999999999999999999999754443
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=2.4e-94 Score=916.77 Aligned_cols=569 Identities=30% Similarity=0.514 Sum_probs=501.9
Q ss_pred ccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC-ceeeEEEECCeeCCcccccceEEEEccCCCCCCCCC
Q 000506 879 DRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YTEGDISISGYPKNQATFARVSGYCEQNDIHSPHVT 957 (1458)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 957 (1458)
+++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.+...+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999987643 358999999998776667888999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000506 958 VYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPG-VDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1458)
Q Consensus 958 V~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~-~~~LSgGqrqRl~ia~aL~~~p~illLDEPTs 1036 (1458)
|+|||.|++.++.+.+...++++++++++++.+||.+++|+.+|+++ .++||||||||++||+||+.+|++||||||||
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999999888777777888899999999999999999999764 67899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCCcchHHHHHHHHhCCCCCCCCCC
Q 000506 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNG 1116 (1458)
Q Consensus 1037 gLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~~~~~~~~~~f~~~~g~~~~~~~ 1116 (1458)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.||. +++.+||+++ |. +||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~-g~-~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDL-GH-PCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHc-CC-CCCCC
Confidence 9999999999999999998899999999999888999999999998 5899999997 5789999999 55 69999
Q ss_pred CCCcceeeeccChhhhhh-----hhhhHHHHHhhCHHHHHHHHHHHHhcCCCCC---CCCCCCCCCCCchHHHHHHHHHH
Q 000506 1117 YNPATWMLEISTPTAEAQ-----LNVDFADIYVRSSLYQRNEELIKELSTPAPG---SSDLYFPTQYSQPFLIQCKACFW 1188 (1458)
Q Consensus 1117 ~npad~~l~v~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Q~~~l~~ 1188 (1458)
.|||||++|+++...+.. ...++.+.|++|+.+++..+.+.....+.++ .......++|..+|+.|++.|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 999999999987543221 1235667788887776655443322211111 11111234678899999999999
Q ss_pred HHHHHhhcChhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000506 1189 KQRQSYWRDPQYNALRFAVTIVVGLLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRE 1268 (1458)
Q Consensus 1189 R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE 1268 (1458)
|+++++||||.++.+|+++++++|+++|++||+++. ++++++++.|++|++++++++.++..+.+.++.||.+|+||
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE 425 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRE 425 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999986 56789999999999999999988888889999999999999
Q ss_pred hhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH
Q 000506 1269 RAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAI 1348 (1458)
Q Consensus 1269 ~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~A~~ 1348 (1458)
+.+|+|++++|++|++++|+|+.++.+++|.+|+|||+|+++++.+||+|+++++++.++++++|+++++++|+..+|+.
T Consensus 426 ~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~ 505 (617)
T TIGR00955 426 TRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALT 505 (617)
T ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHHhhCCCcc-cccccCC--CCcccHHHHHHhhhCCcc
Q 000506 1349 LSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEG-NVEIPGS--TATMTVKQLLKDSFGFKY 1425 (1458)
Q Consensus 1349 ~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~-~~~~~~~--~~~~~~~~~l~~~~g~~~ 1425 (1458)
++++++.++++|+||+++.++||+||+|++|+||++|+++|++.|||++... +|...+. .|..++ +++.+.||++.
T Consensus 506 ~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g-~~~l~~~g~~~ 584 (617)
T TIGR00955 506 VGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSG-EVILETLSFRN 584 (617)
T ss_pred HHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcCh-HHHHHhcCCCc
Confidence 9999999999999999999999999999999999999999999999998764 3321111 123344 55666899999
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000506 1426 DFLPVVAVVKLVWLLAFVFVFTLAITLINFQRR 1458 (1458)
Q Consensus 1426 ~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1458 (1458)
+++|.+++++++|.++|++++++++|+-...+|
T Consensus 585 ~~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 585 ADLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999999999998666555
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=6.4e-92 Score=954.73 Aligned_cols=566 Identities=23% Similarity=0.401 Sum_probs=497.5
Q ss_pred ccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC--CceeeEEEECCeeCCc--ccccceEEEEccCCCCCC
Q 000506 879 DRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYTEGDISISGYPKNQ--ATFARVSGYCEQNDIHSP 954 (1458)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~ 954 (1458)
.++++|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||++... ..+++.++||+|+|.+++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 457799999999999999999999999999999999998632 2479999999997643 234567999999999999
Q ss_pred CCCHHHHHHHHHhhhcCC----CCCHHHHHH-HHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000506 955 HVTVYESLLFSAWLRLSS----DIDSKTRKM-FVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSII 1029 (1458)
Q Consensus 955 ~lTV~e~l~f~~~lr~~~----~~~~~~~~~-~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~il 1029 (1458)
.+||+|+|.|++.++.+. ..+.+++.+ .++++++.+||.+++|+.+|++.+++|||||||||+||++|+.+|+|+
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999999887653 233444333 357799999999999999999889999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCCcchHHHHHHHHhCC
Q 000506 1030 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRQSQKLVEYFEAVP 1108 (1458)
Q Consensus 1030 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~~~~~~~~~~f~~~~ 1108 (1458)
||||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|++ |+++|+||. +++.+||+++
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~l- 305 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKM- 305 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHc-
Confidence 999999999999999999999999875 999999999998789999999999985 799999986 6799999999
Q ss_pred CCCCCCCCCCCcceeeeccChhhhh----------hhhhhHHHHHhhCHHHHHHHHHHHHhcCCC---------------
Q 000506 1109 GVPRITNGYNPATWMLEISTPTAEA----------QLNVDFADIYVRSSLYQRNEELIKELSTPA--------------- 1163 (1458)
Q Consensus 1109 g~~~~~~~~npad~~l~v~~~~~~~----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--------------- 1163 (1458)
|. +||++.|||||++|+++++... ....+|++.|++|+.+++..+.+++.....
T Consensus 306 G~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 306 GF-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred CC-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 65 6999999999999998864311 123589999999999887776654422110
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHHHHHHHH
Q 000506 1164 PGSSDLYFPTQYSQPFLIQCKACFWKQRQSYWRDPQYNALRFAVTIVVGLLFGLIFWDKGQKTKKQQDLQNLFGALYCAV 1243 (1458)
Q Consensus 1164 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~ 1243 (1458)
..++.....+.|..|+|+|+++|++|+++++||||.++.+|+++++++|+++|++||++++ ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011112234688999999999999999999999999999999999999999999999986 4678999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccHHHHHHHHHHHH
Q 000506 1244 FFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVM 1323 (1458)
Q Consensus 1244 ~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1323 (1458)
++.++.++..+ +.+..||+||+|||.+|+|++++|++|++++|+|+.++.+++|++|+|||+||++++++||+|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99999887665 45668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHHhhCCCccccc
Q 000506 1324 MSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVE 1403 (1458)
Q Consensus 1324 ~~~~~~~~~g~~~~~~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~ 1403 (1458)
++.++++++++++++++||..+|+.++++++.++++|+||++|+++||+||+|++|+||++|+++|++.|||++...+|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998876653
Q ss_pred c--cC-----------CCC----------cccHHHHHHhhhCCccCChhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000506 1404 I--PG-----------STA----------TMTVKQLLKDSFGFKYDFLPVVAVVKLVWLLAFVFVFTLAITLINF 1455 (1458)
Q Consensus 1404 ~--~~-----------~~~----------~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1455 (1458)
. |. ..| .+++.+|++..||++++|+|++++++++|+++|+++++++++++++
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 1 10 001 2466899998899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.4e-90 Score=936.31 Aligned_cols=567 Identities=25% Similarity=0.421 Sum_probs=488.2
Q ss_pred ccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC-ceeeEEEECCeeCCcccccceEEEEccCCCCCCCCC
Q 000506 879 DRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YTEGDISISGYPKNQATFARVSGYCEQNDIHSPHVT 957 (1458)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 957 (1458)
.++++|+|||+.++|||+++|+|||||||||||++|+|+.++. ..+|+|.+||++..+...++.++||+|+|.|++.+|
T Consensus 176 ~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lT 255 (1470)
T PLN03140 176 TKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMT 255 (1470)
T ss_pred ccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCc
Confidence 3578999999999999999999999999999999999987642 358999999998755444678999999999999999
Q ss_pred HHHHHHHHHhhhcCCC-------CCHHHH------------------------HHHHHHHHHHcCCCccccccccCCCCC
Q 000506 958 VYESLLFSAWLRLSSD-------IDSKTR------------------------KMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 958 V~e~l~f~~~lr~~~~-------~~~~~~------------------------~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
|+|+|.|++.++.+.. ...+++ +..++++++.+||.+++|+.+|+..++
T Consensus 256 V~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~r 335 (1470)
T PLN03140 256 VKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIR 335 (1470)
T ss_pred HHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCcccc
Confidence 9999999988764211 111111 124678999999999999999998899
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
+|||||||||+||++|+.+|++|||||||+|||+.++..+++.|+++++ .|+|||+++|||+.++++.||++++|++ |
T Consensus 336 glSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G 414 (1470)
T PLN03140 336 GISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-G 414 (1470)
T ss_pred CCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-c
Confidence 9999999999999999999999999999999999999999999999986 4899999999998889999999999985 7
Q ss_pred EEEEeCCCCcchHHHHHHHHhCCCCCCCCCCCCCcceeeeccChhhh-h-----------hhhhhHHHHHhhCHHHHHHH
Q 000506 1086 QVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAE-A-----------QLNVDFADIYVRSSLYQRNE 1153 (1458)
Q Consensus 1086 ~~~~~G~~~~~~~~~~~~f~~~~g~~~~~~~~npad~~l~v~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~ 1153 (1458)
+++|+||. +++.+||+++ |. +||++.|||||++|+++.... . ....+|++.|++|+.+++..
T Consensus 415 ~ivy~G~~----~~~~~yF~~l-Gf-~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~ 488 (1470)
T PLN03140 415 QIVYQGPR----DHILEFFESC-GF-KCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLE 488 (1470)
T ss_pred eEEEeCCH----HHHHHHHHHc-CC-CCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHH
Confidence 99999996 6799999999 65 699999999999999986432 1 11247899999999887766
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHH
Q 000506 1154 ELIKELSTPAPGSSDLYFPTQYSQPFLIQCKACFWKQRQSYWRDPQYNALRFAVTIVVGLLFGLIFWDKGQKTKKQQDLQ 1233 (1458)
Q Consensus 1154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~ 1233 (1458)
+.++.........+.....+.|..+++.|++.|++|+++.+||||.++..|+++.+++|+++|++||+++.+..+..+.+
T Consensus 489 ~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~ 568 (1470)
T PLN03140 489 NELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGA 568 (1470)
T ss_pred HHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Confidence 54432111001111111234688999999999999999999999999999999999999999999999986554555667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccHH
Q 000506 1234 NLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAK 1313 (1458)
Q Consensus 1234 ~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~~~g~~~~~~ 1313 (1458)
.++|++|+++++..+.++.. ++.+..||+||+|||.+++|++++|++|++++|+|+.++.+++|.+|+|||+||+++++
T Consensus 569 ~~~g~lff~~l~~~~~~~~~-l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~ 647 (1470)
T PLN03140 569 LYIGALLFSMIINMFNGFAE-LALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEAS 647 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchh
Confidence 78899999998888776544 57788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHH
Q 000506 1314 RFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTS 1393 (1458)
Q Consensus 1314 ~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~ 1393 (1458)
+||.|+++++++.++++++++++++++|+..+|+.++++++.++++|+||+||+++||+||+|++|+||++|+++|++.|
T Consensus 648 ~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~N 727 (1470)
T PLN03140 648 RFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVN 727 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCccc-ccccCCCCcccHHHHHHhhhCCccC--ChhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000506 1394 QVGDIEGN-VEIPGSTATMTVKQLLKDSFGFKYD--FLPVVAVVKLVWLLAFVFVFTLAITLINF 1455 (1458)
Q Consensus 1394 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~g~~~~--~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1455 (1458)
||.+.... +.+.+. +..++.+|| +.+|+..+ |.|+++++|+||+++|.+++++++++++.
T Consensus 728 Ef~~~~~~~~~~~~~-~~~~G~~~L-~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~ 790 (1470)
T PLN03140 728 EMFAPRWMNKMASDN-STRLGTAVL-NIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNP 790 (1470)
T ss_pred hccCccccCcccCCC-CcccHHHHH-HhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99775532 111221 134455666 67899754 56999999999999999999999999873
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4e-84 Score=813.70 Aligned_cols=568 Identities=25% Similarity=0.470 Sum_probs=503.1
Q ss_pred ccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC-ceeeEEEECCeeCCcccccceEEEEccCCCCCCCCC
Q 000506 879 DRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YTEGDISISGYPKNQATFARVSGYCEQNDIHSPHVT 957 (1458)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 957 (1458)
.+.++|+|+|+.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.+...-++.++|++|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3467999999999999999999999999999999999976532 236799999998776555788999999999999999
Q ss_pred HHHHHHHHHhhhcCCC----CCHHHHH-HHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000506 958 VYESLLFSAWLRLSSD----IDSKTRK-MFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMD 1032 (1458)
Q Consensus 958 V~e~l~f~~~lr~~~~----~~~~~~~-~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1032 (1458)
|+|+|.|+++++.+.. .++.++. +..+.+++.+||.+++|++||+..+||+||||||||+||.+++.+|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998732 2222222 2678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCCcchHHHHHHHHhCCCCC
Q 000506 1033 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVP 1111 (1458)
Q Consensus 1033 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~~~~~~~~~~f~~~~g~~ 1111 (1458)
|+|+|||+.++.++.+.||++++. +.|+++++|||+.+++++||+|++|.+ |+++|+||. +++++||+++ |.
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~-Gf- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDM-GF- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhc-Cc-
Confidence 999999999999999999999865 899999999999999999999999996 799999997 5799999998 55
Q ss_pred CCCCCCCCcceeeeccChhhhhh------------hhhhHHHHHhhCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCchH
Q 000506 1112 RITNGYNPATWMLEISTPTAEAQ------------LNVDFADIYVRSSLYQRNEELIKELSTPAPGSSDLYFPTQYSQPF 1179 (1458)
Q Consensus 1112 ~~~~~~npad~~l~v~~~~~~~~------------~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1179 (1458)
.||+..++|||+.++++...+.+ ...+|++.|.+|+.+++.+..++........++......+|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 69999999999999998322111 115899999999999886654433222222233334456899999
Q ss_pred HHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000506 1180 LIQCKACFWKQRQSYWRDPQYNALRFAVTIVVGLLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVS 1259 (1458)
Q Consensus 1180 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~ 1259 (1458)
|.|++.|+.|.++.+.||..|+..++++.+++|+++|++|++... .+..+.+.+.|++||++++..++.+..+ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999982 5677889999999999999999887766 5556
Q ss_pred HhhhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000506 1260 TERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVAL 1339 (1458)
Q Consensus 1260 ~er~v~~rE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1339 (1458)
+.|+||+|||...+|++++|.++.++.++|..++.+++|.+|+||++||.+++++||.|+++++++..+++++.++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHHhhCCCcccccc--cCCC---------
Q 000506 1340 TPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEI--PGST--------- 1408 (1458)
Q Consensus 1340 ~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~~--~~~~--------- 1408 (1458)
+++...|+.++++.+....+++||+||.++||+||+|++|+||+.|++++++.|||++.+.+|.+ |+..
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998877641 1100
Q ss_pred -------C--cccHHHHHHhhhCCccCChhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000506 1409 -------A--TMTVKQLLKDSFGFKYDFLPVVAVVKLVWLLAFVFVFTLAITLINFQ 1456 (1458)
Q Consensus 1409 -------~--~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1456 (1458)
| .+.+.+|++..|+|++.|.|++++|++||.++|.+++.+++.++|+-
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 0 12357788889999999999999999999999999999999999854
No 10
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=4.3e-80 Score=786.12 Aligned_cols=572 Identities=26% Similarity=0.434 Sum_probs=484.6
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCC
Q 000506 180 KRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 180 ~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 259 (1458)
+++++||+|+|++++|||+++|+|||||||||||++|+|+.+++...+|+|.+||++++....++.+|||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 44677999999999999999999999999999999999998875456899999999886545567899999999999999
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc-
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM- 338 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~- 338 (1458)
||+|||.|+++++.+... .+.+ ....++.+++.+||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~~-------~~~~------------------------~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRV-------TKKE------------------------KRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCC-------CHHH------------------------HHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 999999999887643211 0111 11245778999999999999999864
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
.|||||||||||+||++|+.+|++++|||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 789999999999999999999999999999999999999999999999986 4789999999999999999999999999
Q ss_pred CeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhHHhhhcC
Q 000506 419 GQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQLANDLAV 498 (1458)
Q Consensus 419 G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~~~ 498 (1458)
|+++|+|+++++.+||+++||+||+..|++||+.++++..+..+ .....+.+++.+.|++++..++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSE-------NESRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCcccc-------cchHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 99999999999999999999999999999999999887543211 00112345666777766655544433321
Q ss_pred CcCCcC---CCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhh
Q 000506 499 PYDKSR---THPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADGAKF 575 (1458)
Q Consensus 499 ~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~ 575 (1458)
...... .........++..+++.|++.+++|.++..+||+..+..++++.+++++++|++|++.+.+. .+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 111100 00011123456788999999999999999999999999999999999999999999987543 234556
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHHHH
Q 000506 576 YGALFFSLINLMFNGLA-ELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAASRL 654 (1458)
Q Consensus 576 ~g~lff~l~~~~~~~~~-~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~f 654 (1458)
.|++|+.++...|.++. .+.....+|++|+||+..++|++++|++++++.++|+.++.+++|.+++|||+|+.+++.+|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 78899998888887654 45566689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHHhh
Q 000506 655 FRQYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVINEF 734 (1458)
Q Consensus 655 f~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef 734 (1458)
|.+++++++++.++.++++++++++++..+|+.+++++++++++++||+++.++||+||+|++|+||+.|+++++++|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC-CCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000506 735 LDERW-SKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFL 795 (1458)
Q Consensus 735 ~~~~~-~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~ 795 (1458)
.+..+ .|...+....|...|..+++.+|+...+ .|.++++++++.++|.++++++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~~--~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNAD--LYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCccc--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98776 4433222111245689999999987654 58999999999999999999999864
No 11
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.6e-80 Score=773.84 Aligned_cols=584 Identities=29% Similarity=0.495 Sum_probs=492.0
Q ss_pred CCceEEEEeeeeEEEEEecCCCCCCCchHHHHHHHHhhhhhhcccccccccceeeeceeeEEeCCeEEEEEcCCCCcHHH
Q 000506 132 IPKIEIRYEHLNIQGEVHIGSRAIPTLPNAVINIAENVLGSLRILPSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTT 211 (1458)
Q Consensus 132 ~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKST 211 (1458)
...++++|+|+++++... . +..+++|+||||+++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~-~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------S-KKTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------C-CccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 356889999999886522 1 14567999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhc
Q 000506 212 LLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEA 291 (1458)
Q Consensus 212 LL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1458)
||++|+|+.++...++|+|++||++.+....++.+|||.|+|.++|++||+|++.|+|+++.+.+ +++.+
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~~~~~--- 141 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------LSKEE--- 141 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------CCHHH---
Confidence 99999999987667899999999887777778899999999999999999999999999886542 12222
Q ss_pred CCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCC
Q 000506 292 GIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTG 371 (1458)
Q Consensus 292 ~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsg 371 (1458)
.+.+++.+++.|||.+|+||++|+...|||||||||||+||..|+.+|+||+|||||||
T Consensus 142 ---------------------k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 142 ---------------------KRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred ---------------------HHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 23467889999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHH
Q 000506 372 LDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFL 451 (1458)
Q Consensus 372 LD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l 451 (1458)
||+.++.++++.|+++++. |+|+|+++|||+.+++++||++++|++|+++|+|+++++.+||+++|++||+..||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999987 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCch--hhhhhhhccCCCCccCCHHHHHHhhh-cchhhhhHHhhhcCCcCCcCCCccccccCCCCcchHHHHHHHHH
Q 000506 452 QEVTSKK--DQEQYWFRKDQPYRYISVSDFVQGFS-SFHVGQQLANDLAVPYDKSRTHPAALVKNKYGISNMDLFRACFG 528 (1458)
Q Consensus 452 ~ev~s~~--~~~~~~~~~~~~~~~~s~~~~~~~~~-~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 528 (1458)
.++.+.. .++.... .........++ .....+... ........ .. ........++|.|+..+++
T Consensus 280 l~l~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~---~~~~~~~~s~~~q~~~L~~ 345 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA--------VRIAKLINKFSQTDNLKKTLE-ALEKSLST--SK---KVEIGTSPSWWTQFKILLK 345 (613)
T ss_pred HHHHccCCCchhHHhH--------HHHHHHhhhccccchhhhhHH-HHhhhccc--cc---ccccccCCcHHHHHHHHHH
Confidence 9988743 1110000 00000111111 000000000 00000000 00 0001116789999999999
Q ss_pred HHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhhHHHHHHHHHHHHHHHHH-HHHHHhcccchhhhc
Q 000506 529 REWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADGAKFYGALFFSLINLMFNGLA-ELAFTVFRLPVFFKQ 607 (1458)
Q Consensus 529 R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~-~~~~~~~~~~vf~kq 607 (1458)
|.+..++|++.+...|.+|.+++++++|.+|++.+.+...+ ....|.+||.+....+..+. .+.....++++|.||
T Consensus 346 R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE 422 (613)
T KOG0061|consen 346 RSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGI---QNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRE 422 (613)
T ss_pred HHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHH---HHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999986544332 35678888888877676665 577888999999999
Q ss_pred ccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Q 000506 608 RDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAASRLFRQYLAFFAVNSMALSLFRFIGSIGRTEVVANT 687 (1458)
Q Consensus 608 r~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~ 687 (1458)
+.+++|+.++|++++.+.++|+.++.+++|.+++|||+|++++..+|+.+.+..++...++.+++.+++++.++...|.+
T Consensus 423 ~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~ 502 (613)
T KOG0061|consen 423 TSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATS 502 (613)
T ss_pred HhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhhhhhhccCccccc
Q 000506 688 LGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVINEFLDERWSKPVSDPKIHEPTVGKLLLKSRGFFTVN 767 (1458)
Q Consensus 688 ~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~ 767 (1458)
+++++++.+++++||+++.+.+|+||.|+.|+|+..|+++++++|||.+....|....+ .++...|.++++..++...+
T Consensus 503 ~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ 581 (613)
T KOG0061|consen 503 LGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGN-LCCESTGEDVLKQLGFEDSS 581 (613)
T ss_pred hHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcC-CcccccHHHHHHhcCCcccc
Confidence 99999999999999999999999999999999999999999999999973333332221 23567889999988887655
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 000506 768 YWYWICIGALFGFTILFNILFIAAIQFLN 796 (1458)
Q Consensus 768 ~~~w~~~g~l~g~~i~f~~l~~~~l~~~~ 796 (1458)
.|.++.+++++.++|.+++++++++..
T Consensus 582 --~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 582 --FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred --cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 588999999999999999999998754
No 12
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.4e-78 Score=768.45 Aligned_cols=607 Identities=20% Similarity=0.349 Sum_probs=471.7
Q ss_pred CCceEEEEeeeeEEEEEecCCCCCCCchHHHHHHHHhhhhhhcccccccccceeeeceeeEEeCCeEEEEEcCCCCcHHH
Q 000506 132 IPKIEIRYEHLNIQGEVHIGSRAIPTLPNAVINIAENVLGSLRILPSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTT 211 (1458)
Q Consensus 132 ~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKST 211 (1458)
.+.++++|.++++.+.......+... ....+.. ....+.+.++.+++++|+|+|+++++||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~-~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGH-KPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----ccccccc-ccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 45799999999998754310111110 0000000 001111223344577999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhc
Q 000506 212 LLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEA 291 (1458)
Q Consensus 212 LL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1458)
||++|+|+++++ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.... ..+.+
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~~~~--- 177 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LTKQE--- 177 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CCHHH---
Confidence 999999998774 3589999999987542 24569999999999999999999999876542211 00001
Q ss_pred CCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCC
Q 000506 292 GIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTG 371 (1458)
Q Consensus 292 ~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsg 371 (1458)
....++.+++.+||++++||++|+...++|||||||||+||++|+.+|++|+|||||+|
T Consensus 178 ---------------------~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 178 ---------------------KILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred ---------------------HHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 11235668999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHH
Q 000506 372 LDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFL 451 (1458)
Q Consensus 372 LD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l 451 (1458)
||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+.+++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999986 4789999999988889999999999999999999999999999999999999999999999
Q ss_pred HHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhHHhhhcC---CcCCcC-----CCc-cccccCCCCcchHHH
Q 000506 452 QEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQLANDLAV---PYDKSR-----THP-AALVKNKYGISNMDL 522 (1458)
Q Consensus 452 ~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~~~---~~~~~~-----~~~-~~~~~~~~~~s~~~~ 522 (1458)
+++++...+.+.......+ ...+++.+.|++.. .+...+.... +....+ ..+ .......+..++|.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998764321100000011 11233344443211 1111111100 000000 000 000112345689999
Q ss_pred HHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhhHHHHHHHHHHHHH-HHHHHHHHHhccc
Q 000506 523 FRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADGAKFYGALFFSLINLMF-NGLAELAFTVFRL 601 (1458)
Q Consensus 523 ~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~lff~l~~~~~-~~~~~~~~~~~~~ 601 (1458)
+..+++|.++. +|+..+...|+++.+++|+++|++|++++ ..+.+.+.|++||.+++.++ +.+..+.....+|
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999887 78888888999999999999999999874 22346678999999777555 5567777888999
Q ss_pred chhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000506 602 PVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAASRLFRQYLAFFAVNSMALSLFRFIGSIGRT 681 (1458)
Q Consensus 602 ~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~ 681 (1458)
++|+|||.+++|++++|++++++.++|+.++.+++|++++|||+|+.+++++||.|++++++.+.++.+++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHHhhcCCCC-----CCCCCCC--CCcccchh
Q 000506 682 EVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVINEFLDERW-----SKPVSDP--KIHEPTVG 754 (1458)
Q Consensus 682 ~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~-----~~~~~~~--~~~~~~~g 754 (1458)
..+|+.+++++++++++++||+++ +||+||+|++|+||+.|+++++++|||.+.+. .|..+.. ...|...+
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999996 79999999999999999999999999986542 3432110 00011222
Q ss_pred hhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 000506 755 KLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLN 796 (1458)
Q Consensus 755 ~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~ 796 (1458)
...+. ....|.+++++++++++|.++.+++|++.+
T Consensus 624 ~~~~~-------~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG-------QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc-------ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222 234688999999999999999999997653
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-72 Score=712.10 Aligned_cols=767 Identities=21% Similarity=0.307 Sum_probs=417.9
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCC
Q 000506 176 LPSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQN 252 (1458)
Q Consensus 176 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~ 252 (1458)
.++.+++.+||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|.++|+++.++.. |+++|.|+|+
T Consensus 359 sYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~Qe 435 (1228)
T KOG0055|consen 359 SYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQE 435 (1228)
T ss_pred cCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeec
Confidence 345566788999999999999999999999999999999999999998 9999999999988764 5789999999
Q ss_pred CCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccc
Q 000506 253 DLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADT 332 (1458)
Q Consensus 253 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 332 (1458)
|.+|. .||+||+.|+- ||...+++.+++.+.+ ..+++. .|++..||
T Consensus 436 PvlF~-~tI~eNI~~G~-------------------------~dat~~~i~~a~k~an-----a~~fi~---~lp~g~~T 481 (1228)
T KOG0055|consen 436 PVLFA-TTIRENIRYGK-------------------------PDATREEIEEAAKAAN-----AHDFIL---KLPDGYDT 481 (1228)
T ss_pred hhhhc-ccHHHHHhcCC-------------------------CcccHHHHHHHHHHcc-----HHHHHH---hhHHhhcc
Confidence 99885 59999999852 2222333444444332 234433 48889999
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
.||+.... ||||||||++|||||+.+|+|||||||||+||+.+...+.+.|++..+ |+|+|+.. |....+-+ +|+
T Consensus 482 ~vge~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTivVa-HRLStIrn-aD~ 556 (1228)
T KOG0055|consen 482 LVGERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIVVA-HRLSTIRN-ADK 556 (1228)
T ss_pred cccCCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEEEe-eehhhhhc-cCE
Confidence 99994333 999999999999999999999999999999999999999999999865 67777755 44555555 999
Q ss_pred EEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCH-HHH--HHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcch--
Q 000506 413 IILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGV-ADF--LQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFH-- 487 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~-ad~--l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~-- 487 (1458)
|++|++|+|++.|+++|++.. .+. ++. +|+....++. ..+. .. ..++.....+.+.
T Consensus 557 I~v~~~G~IvE~G~h~ELi~~-----------~G~Y~~lv~~Q~~~~~~~~-~~~~---~~----~~~~~~~s~~~s~~~ 617 (1228)
T KOG0055|consen 557 IAVMEEGKIVEQGTHDELIAL-----------GGIYSSLVRLQELEKAAED-EEEE---ES----LKEERSRSLKSSSSS 617 (1228)
T ss_pred EEEEECCEEEEecCHHHHHhc-----------cchHHHHHHHHhhhhhhhc-cccc---cc----hhhhhhhcccccccc
Confidence 999999999999999999862 111 111 1222221110 0000 00 0000000000000
Q ss_pred --hhhh-HHhhh--cCCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHH---
Q 000506 488 --VGQQ-LANDL--AVPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVF--- 559 (1458)
Q Consensus 488 --~~~~-l~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf--- 559 (1458)
..+. ..... ..+.++....+. .......++++.++.+. ++|..+.-.......+-....+.+++++.++
T Consensus 618 ~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~s~~~i~k~~~-pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f 694 (1228)
T KOG0055|consen 618 PSLSRGSNRSNLLSVKPEGEDPEEPV--SEEDEKVSFWRIFKLNK-PEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAF 694 (1228)
T ss_pred ccccCCcccccccccccccccccccc--ccccccccHHHHHHhcc-chhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 0000 00000 000000000000 01112334454444332 2332222222222222233344455555443
Q ss_pred hccCCCCCccccchhhHHHHHHHHHH----------HHHHHHHHHHHHhcccchhh---hcccCcccChh-hHHH-HHHH
Q 000506 560 FRTEMPVGNVADGAKFYGALFFSLIN----------LMFNGLAELAFTVFRLPVFF---KQRDHLFYPPW-AYAL-PIFV 624 (1458)
Q Consensus 560 ~~~~~~~~~~~~~~~~~g~lff~l~~----------~~~~~~~~~~~~~~~~~vf~---kqr~~~~y~~~-ay~l-a~~l 624 (1458)
+..+. +........+..+|.++.. .+|.-+++....-.|...|. +|....|..+- +=.+ +...
T Consensus 695 ~~~~~--~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa 772 (1228)
T KOG0055|consen 695 YPPDD--DELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLA 772 (1228)
T ss_pred hCCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHh
Confidence 22221 1111111223333332221 11222222222112222222 12111111110 0001 0011
Q ss_pred HHhh---------H----HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH----HHH-
Q 000506 625 LRIP---------L----SILESAIWVCLTYYTIGFAPAASRLFRQYLAFFAVNSMALSLFRFIGSIGRTEV----VAN- 686 (1458)
Q Consensus 625 ~~ip---------~----~i~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~----va~- 686 (1458)
.+.| + .-+.+++..+++=|..|..-+.--...+.++ ........+++........ -|.
T Consensus 773 ~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll----~~~~~~~~~~~~~~~~~~~~~~~ea~~ 848 (1228)
T KOG0055|consen 773 TDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLL----ILSGYLQKKFLKGFSKDDKKAYEEASK 848 (1228)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 1111 0 0111111111111111111111111111111 1111111111111111110 000
Q ss_pred ----HHHHHHHHHH--------HHhhheeccCCC---chhHHH---------HHHHHcHHHHHHHHHHHHhhcCCCCCCC
Q 000506 687 ----TLGTFTLLLV--------FVLGGFVIAKDD---IEPFMI---------WGYYVSPMMYGQNAIVINEFLDERWSKP 742 (1458)
Q Consensus 687 ----~~~~~~~~~~--------~l~~Gf~i~~~~---ip~~~~---------W~~~isp~~y~~~al~~nef~~~~~~~~ 742 (1458)
.+..+-.+-. -++.--...+.. -..+|. .+|++.-+.|-+.+.++.. .+
T Consensus 849 iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~----g~--- 921 (1228)
T KOG0055|consen 849 IAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISN----GE--- 921 (1228)
T ss_pred HHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc----CC---
Confidence 0000000000 000000000000 000000 1122222222222322211 00
Q ss_pred CCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeecccccccccCCCCCC
Q 000506 743 VSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGDKKKKASGQPGT 822 (1458)
Q Consensus 743 ~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (1458)
.+. .++.+ ++.++.+..+ ...-+..|.....+++.... ....-....
T Consensus 922 --------~~~-~~~~~----------------vf~~l~~ta~-~~~~~~s~~Pd~~ka~~Aa~----~iF~i~dr~--- 968 (1228)
T KOG0055|consen 922 --------MTF-EDVFR----------------VFMALSFTAM-ALGQASSYAPDISKAKIAAG----SIFEILDRK--- 968 (1228)
T ss_pred --------cCH-HHHHH----------------HHHHHHHHHH-HHHHHHhhCcHHHHHHHHHH----HHHHHhcCC---
Confidence 000 00000 0000000000 00111111111000000000 000000000
Q ss_pred CCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecC
Q 000506 823 EDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGV 902 (1458)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~ 902 (1458)
+.. ++.. ..|...+.-.-.++|+||++.|+.. +..++|+|+|++|++|+.+||+||
T Consensus 969 ------~~i-------~~~~-~~~~~~~~~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~ 1024 (1228)
T KOG0055|consen 969 ------PTI-------DPDS-TSGGKLPNVKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGP 1024 (1228)
T ss_pred ------CCC-------CCCC-CCCCccccceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECC
Confidence 000 0000 1111222233479999999999754 356799999999999999999999
Q ss_pred CCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHH
Q 000506 903 SGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTR 979 (1458)
Q Consensus 903 sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~ 979 (1458)
|||||||.+.+|-+... +..|.|.|||++++. ..+|+++|.|.|+|.+|. -|++||+.|+. . +++.++
T Consensus 1025 SGsGKSTvI~LLeRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~----~-~vs~~e- 1095 (1228)
T KOG0055|consen 1025 SGSGKSTVISLLERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS----E-EVSEEE- 1095 (1228)
T ss_pred CCCCHHHHHHHHHHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC----C-CCCHHH-
Confidence 99999999999998776 589999999998754 457889999999999985 69999999981 1 234333
Q ss_pred HHHHHHHHHH-------cCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 000506 980 KMFVDEVMDL-------VELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN 1052 (1458)
Q Consensus 980 ~~~v~~~l~~-------l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~ 1052 (1458)
+.+.++. .+|.+-.||.+|..|. +||||||||++||||+++||+||+|||.||+||+++.+.|+++|.+
T Consensus 1096 ---Ii~Aak~ANaH~FI~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~ 1171 (1228)
T KOG0055|consen 1096 ---IIEAAKLANAHNFISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDR 1171 (1228)
T ss_pred ---HHHHHHHhhhHHHHhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHH
Confidence 3333332 3566778999997665 7999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1053 TVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1053 ~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
.. .|||.|+++|++| ..+.+|.|.|+++ |+|++.|+-
T Consensus 1172 a~-~gRT~IvIAHRLS--TIqnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1172 AM-EGRTTIVIAHRLS--TIQNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred hh-cCCcEEEEecchh--hhhcCCEEEEEEC-CEEEecccH
Confidence 64 6899999999986 5678999999985 899999984
No 14
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.1e-70 Score=741.11 Aligned_cols=223 Identities=26% Similarity=0.410 Sum_probs=193.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++. +++.+|+|||+.|++||++||+||||||||||+++|+|..+ +.+|+|.++|++.
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEEC
Confidence 4889999887731 12569999999999999999999999999999999999987 4789999999986
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 935 NQ--ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 935 ~~--~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
.. ...++.+|||||++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+.+|+.++ .|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHHH
Confidence 42 2345679999999999999999999998776653 3344455678999999999998888765 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|||+++ ++...|||+++|.+ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999888999999999986 67889999999985 79999998
Q ss_pred CCcchHHHHHHH
Q 000506 1093 LGRQSQKLVEYF 1104 (1458)
Q Consensus 1093 ~~~~~~~~~~~f 1104 (1458)
. +++.+.|
T Consensus 2154 ~----q~Lk~~~ 2161 (2272)
T TIGR01257 2154 I----QHLKSKF 2161 (2272)
T ss_pred H----HHHHHHh
Confidence 6 4555555
No 15
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-67 Score=682.39 Aligned_cols=747 Identities=20% Similarity=0.266 Sum_probs=422.7
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCCH
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMTV 261 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 261 (1458)
..+.|+|||+.|++|++++|+||.|||||+||.+|.|+++.. +|+|.++| .++||+|++|+++. ||
T Consensus 533 ~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pWI~ng-Tv 598 (1381)
T KOG0054|consen 533 PEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPWIQNG-TV 598 (1381)
T ss_pred CcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccHhhCC-cH
Confidence 344899999999999999999999999999999999999875 99999998 48999999999965 99
Q ss_pred HHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCC
Q 000506 262 RETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRG 341 (1458)
Q Consensus 262 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 341 (1458)
||||.|+.... ++.+++.+++|+++.+- + -|+.+..|.||+. +..
T Consensus 599 reNILFG~~~d-----------------------~~rY~~Vi~aC~L~~Dl---------e--~Lp~GD~TeIGEr-Gin 643 (1381)
T KOG0054|consen 599 RENILFGSPYD-----------------------EERYDKVIKACALKKDL---------E--ILPFGDLTEIGER-GIN 643 (1381)
T ss_pred HHhhhcCcccc-----------------------HHHHHHHHHHccCHhHH---------h--hcCCCCcceecCC-ccC
Confidence 99999964321 13466778888876531 1 2677889999983 223
Q ss_pred CChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-HHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 342 VSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMK-QMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 342 LSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~-~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
||||||||+++|||++.+++|++||+|.|++|+++..+|.+..- .+- .++|+|+.. | .-+....+|.|++|++|+
T Consensus 644 LSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~ILVT-H-ql~~L~~ad~Iivl~~G~ 719 (1381)
T KOG0054|consen 644 LSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVILVT-H-QLQFLPHADQIIVLKDGK 719 (1381)
T ss_pred CcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEEEe-C-chhhhhhCCEEEEecCCe
Confidence 99999999999999999999999999999999999999986443 332 245665554 4 457889999999999999
Q ss_pred EEEEcChhhHHH---HHHhcCCCCCCCCCHHHHHHHhcCchhhhhhh-hccCCCCccCCHHHHHHhhhcchhhhhHHhhh
Q 000506 421 IVYQGPREKVLE---FFEYMGFKCPDRKGVADFLQEVTSKKDQEQYW-FRKDQPYRYISVSDFVQGFSSFHVGQQLANDL 496 (1458)
Q Consensus 421 iv~~G~~~~~~~---~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~ 496 (1458)
|...|+++|+.+ +|+.+ ....+.++.- ...+.+....+..+... +.........+.
T Consensus 720 I~~~Gty~el~~~~~~~~~l-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~- 779 (1381)
T KOG0054|consen 720 IVESGTYEELLKSGGDFAEL-----------------AHEEESEQEEEASEKDLESGESSRESES--RSLESLSSEEEK- 779 (1381)
T ss_pred EecccCHHHHHhcchhHHHH-----------------hhccchhhccccccccccccccccchhh--hhhhhhcccccc-
Confidence 999999999973 23322 1000000000 00000000000000000 000000000000
Q ss_pred cCCcCCcC-CCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHH-HHHHHHHHHHHHH---HHHhccCCCCCcc--
Q 000506 497 AVPYDKSR-THPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIF-KTSQITIMSLIAL---TVFFRTEMPVGNV-- 569 (1458)
Q Consensus 497 ~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~-~~~~~~i~ali~g---~vf~~~~~~~~~~-- 569 (1458)
....+.+ ........+..+.-.|.-++..++- ........+ -+.......+.++ ++=+.++......
T Consensus 780 -~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a-----~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~ 853 (1381)
T KOG0054|consen 780 -SKDEKEEEDKLVQEEERETGKVSWSVYKKYIKA-----AGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT 853 (1381)
T ss_pred -cccccchhhHHHHHHHHhcCEeeHHHHHHHHHh-----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 0000000 0000000011222223333222211 000000000 0111111111111 1111222111111
Q ss_pred -ccchhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCc-
Q 000506 570 -ADGAKFYGALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGF- 647 (1458)
Q Consensus 570 -~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~- 647 (1458)
.+...+.+. | + .+. +... -+.++ -.++++..|+
T Consensus 854 ~~~~~~~~~v-Y-~----~l~-~~~~---------------------------------~~~~~-----rs~~~~~~~l~ 888 (1381)
T KOG0054|consen 854 TVSTSFYLGV-Y-A----LLG-VASS---------------------------------LLTLL-----RSFLFAKGGLK 888 (1381)
T ss_pred CCCcchHHHH-H-H----HHH-HHHH---------------------------------HHHHH-----HHHHHHHHHHH
Confidence 011111111 0 0 000 0000 00000 0111111121
Q ss_pred ------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH-HHHHHHHHHHHHHHhhheeccCCCchhHHHHH----
Q 000506 648 ------APAASRLFRQYLAFFAVNSMALSLFRFIGSIGRTEVV-ANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWG---- 716 (1458)
Q Consensus 648 ------~~~~~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~v-a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~---- 716 (1458)
+.-..+.++..+.+|.++..+..++||..++..-... ...+..++.. ++.+.|.++......||+.+.
T Consensus 889 aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~-~~~~l~~~~vi~~~~P~fli~~~pl 967 (1381)
T KOG0054|consen 889 ASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQS-LLNVLGILVVISYVTPWFLIAIIPL 967 (1381)
T ss_pred HHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHH-HHHHHHHHHHhhHHhHHHHHHHHHH
Confidence 1223456667778899999999999999988754433 3333333333 333333333333344444332
Q ss_pred ---HHHcHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhhhhhhccCc--------------c--------ccchhhH
Q 000506 717 ---YYVSPMMYGQNAIVINEFLDERWSKPVSDPKIHEPTVGKLLLKSRGF--------------F--------TVNYWYW 771 (1458)
Q Consensus 717 ---~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~g~~~l~~~g~--------------~--------~~~~~~w 771 (1458)
||.--.+|-..+--+....+..-+.... +..+...|...++.++- . ..+.|.-
T Consensus 968 ~v~~~~~~~~Y~~tsReLkRLesitRSPi~s--h~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla 1045 (1381)
T KOG0054|consen 968 GVIYYFVQRYYLATSRELKRLESITRSPIYS--HFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLA 1045 (1381)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhcccchHHH--hHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 2222222222221111111111110000 00011122222222221 0 1112222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCC--CCCCCceeeccc-------------c-cccccCCCCCCCCCc--ccccccC
Q 000506 772 ICIGALFGFTILFNILFIAAIQFLNPL--GKAKPTVIEEDG-------------D-KKKKASGQPGTEDTD--MSVRSSS 833 (1458)
Q Consensus 772 ~~~g~l~g~~i~f~~l~~~~l~~~~~~--~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~--~~~~~~~ 833 (1458)
+.+-.+...++++..++.+ +...... +..+-.+++.-. . +.+..+.+...+..+ .+.+...
T Consensus 1046 ~Rle~ig~~~v~~~al~~v-l~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~ 1124 (1381)
T KOG0054|consen 1046 VRLELLGNLVVLIAALFAV-LLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEI 1124 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHH-HccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCC
Confidence 2222222222222111111 1110000 000000000000 0 000000000000000 0000000
Q ss_pred CCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhh
Q 000506 834 ENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDV 913 (1458)
Q Consensus 834 ~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~ 913 (1458)
+....+..||..| .++|+|++..|.. +-..+|||||++|+|||.+||+|++|||||||+++
T Consensus 1125 ~~~~pp~~WP~~G--------~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~a 1185 (1381)
T KOG0054|consen 1125 EESRPPPSWPSKG--------EIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILA 1185 (1381)
T ss_pred cCCCCCCCCCCCC--------eEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHH
Confidence 1111344567666 6899999877742 23469999999999999999999999999999999
Q ss_pred hcCCcCCCceeeEEEECCeeCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHc
Q 000506 914 LAGRKTGGYTEGDISISGYPKNQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLV 990 (1458)
Q Consensus 914 L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l 990 (1458)
|.+... +.+|+|.|||.++.+ .++|++++.+||||.+|. -|||.|| |+..+..++.++++||..
T Consensus 1186 LFRl~e--~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFs-GTvR~NL----------DPf~e~sD~~IW~ALe~~ 1252 (1381)
T KOG0054|consen 1186 LFRLVE--PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFS-GTVRFNL----------DPFDEYSDDEIWEALERC 1252 (1381)
T ss_pred HHHhcC--ccCCeEEEcCeecccccHHHHHhcCeeeCCCCceec-Ccccccc----------CcccccCHHHHHHHHHHh
Confidence 999876 478999999999765 467889999999999885 4777776 455566677789999999
Q ss_pred CCCccc-------cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Q 000506 991 ELEPLT-------NAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCT 1063 (1458)
Q Consensus 991 ~L~~~~-------~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t 1063 (1458)
+|.+.- |+.+. ++..++|.||||.+|+||||+++++||+|||+|+++|++|...|+++||+-.+ +||||++
T Consensus 1253 ~Lk~~v~~~p~~Ld~~v~-egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltI 1330 (1381)
T KOG0054|consen 1253 QLKDVVSSLPGGLDSEVS-EGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTI 1330 (1381)
T ss_pred ChHHHHhhCCcCCCceec-CCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEE
Confidence 887544 33333 34568999999999999999999999999999999999999999999999754 7999999
Q ss_pred ecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1064 IHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1064 ~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
.|+.+ ....+|||+||++ |+++++|++
T Consensus 1331 AHRl~--TVmd~DrVlVld~-G~v~EfdsP 1357 (1381)
T KOG0054|consen 1331 AHRLN--TVMDSDRVLVLDA-GRVVEFDSP 1357 (1381)
T ss_pred eeccc--hhhhcCeEEEeeC-CeEeecCCh
Confidence 99986 3446899999996 789998887
No 16
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.7e-66 Score=615.13 Aligned_cols=474 Identities=26% Similarity=0.352 Sum_probs=364.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-CCcccEEEECCeecCCccc-------cceEEEecCCC-
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD-LKLTGKIKYCGHEFKEFVP-------QRTCAYISQND- 253 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 253 (1458)
..+++||||++.+||+++|+|.|||||||+.++|.|++++. ...+|+|.++|.++..... .+.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 56999999999999999999999999999999999999876 4558999999997654432 25799999996
Q ss_pred -CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccc
Q 000506 254 -LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADT 332 (1458)
Q Consensus 254 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 332 (1458)
.+-|-+||.+-+.-..+.++...+ ++....+.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~~---------------------------------~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGSR---------------------------------AEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhccccH---------------------------------HHHHHHHHHHHHHcCCCChhhh
Confidence 466778999988765554432110 0112234558999999987655
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
+.+...|||||||||.||+||+.+|++|++||||++||+.++.+|.+.|+++.++. ++.++.++|+..-+.+++||
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~-g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQREL-GMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHc-CcEEEEEcCCHHHHHHhcCe
Confidence 45667799999999999999999999999999999999999999999999999764 57788899999999999999
Q ss_pred EEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhH
Q 000506 413 IILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQL 492 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l 492 (1458)
|+||++|++++.|+++++.+. | .+||.. .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p-------------------------~hpYT~-----------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------P-------------------------QHPYTR-----------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------c-------------------------CCcccH-----------------HH
Confidence 999999999999999998641 1 111100 00
Q ss_pred HhhhcCCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccc
Q 000506 493 ANDLAVPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADG 572 (1458)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~ 572 (1458)
.+.. |. .
T Consensus 255 l~a~--p~--------------------------------------------------------------------~--- 261 (539)
T COG1123 255 LAAV--PR--------------------------------------------------------------------L--- 261 (539)
T ss_pred HhhC--CC--------------------------------------------------------------------c---
Confidence 0000 00 0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHH
Q 000506 573 AKFYGALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAAS 652 (1458)
Q Consensus 573 ~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~ 652 (1458)
T Consensus 262 -------------------------------------------------------------------------------- 261 (539)
T COG1123 262 -------------------------------------------------------------------------------- 261 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHH
Q 000506 653 RLFRQYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVIN 732 (1458)
Q Consensus 653 ~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~n 732 (1458)
T Consensus 262 -------------------------------------------------------------------------------- 261 (539)
T COG1123 262 -------------------------------------------------------------------------------- 261 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCCCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeeccccc
Q 000506 733 EFLDERWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGDK 812 (1458)
Q Consensus 733 ef~~~~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 812 (1458)
.. ..
T Consensus 262 ------------~~----------------------------------------------------------------~~ 265 (539)
T COG1123 262 ------------GD----------------------------------------------------------------EK 265 (539)
T ss_pred ------------cc----------------------------------------------------------------cc
Confidence 00 00
Q ss_pred ccccCCCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEe
Q 000506 813 KKKASGQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFR 892 (1458)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~ 892 (1458)
. .. .... .. .+ ...-++++|++..+..+.... ....+...+++||||.++
T Consensus 266 ~--~~----------~~~~----~~-----------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~ 315 (539)
T COG1123 266 I--IR----------LPRR----GP-----------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLR 315 (539)
T ss_pred c--cc----------cccc----cc-----------cc-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEec
Confidence 0 00 0000 00 00 011355666665554322111 001234679999999999
Q ss_pred CCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC--C---cccccceEEEEccCC--CCCCCCCHHHHHHHH
Q 000506 893 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK--N---QATFARVSGYCEQND--IHSPHVTVYESLLFS 965 (1458)
Q Consensus 893 ~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~gyv~Q~~--~~~~~lTV~e~l~f~ 965 (1458)
+||++||+|+||||||||.++|+|+.++ .+|.|.++|.+. + ....++.+-+++||+ .+.|.+||++.+.-.
T Consensus 316 ~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~ep 393 (539)
T COG1123 316 EGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEP 393 (539)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhH
Confidence 9999999999999999999999999874 789999999862 1 123456677788877 577999999999876
Q ss_pred HhhhcCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000506 966 AWLRLSSDIDSKTRKMFVDEVMDLVELEP-LTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1044 (1458)
Q Consensus 966 ~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1044 (1458)
...... ....++++++.++++.++|.+ ..+++ +.+||||||||++|||||+.+|++|++|||||.||+..+.
T Consensus 394 L~~~~~--~~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa 466 (539)
T COG1123 394 LRIHGG--GSGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQA 466 (539)
T ss_pred Hhhhcc--cchHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHH
Confidence 544332 235667778999999999986 45554 4589999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1045 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1045 ~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
.|.++|+++.++ |.|.|+++||.+ -+.+.|||+++|.+ |+++..||.
T Consensus 467 ~VlnLl~~lq~e~g~t~lfISHDl~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 467 QVLNLLKDLQEELGLTYLFISHDLA-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred HHHHHHHHHHHHhCCEEEEEeCCHH-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 999999999876 999999999987 47789999999985 899999975
No 17
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-65 Score=704.97 Aligned_cols=211 Identities=22% Similarity=0.294 Sum_probs=178.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++|+||++.|+. +..++|+|||++|+|||.+||+|+||||||||+++|.|..+ +.+|+|.|||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEec
Confidence 5899999998842 12359999999999999999999999999999999999877 4789999999987
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-------LTNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 1004 (1458)
.. ..+|+.++||||++.++.. |+||||.+.. +.+ ++.++++++..++.+ -.|+.+|..
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~- 1371 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEA- 1371 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCC-
Confidence 54 4578899999999999875 9999997531 112 334677777777653 346677653
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1372 G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~- 1447 (1622)
T PLN03130 1372 GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA- 1447 (1622)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999975 4899999999976 4567999999985
Q ss_pred cEEEEeCCCC
Q 000506 1085 GQVIYAGPLG 1094 (1458)
Q Consensus 1085 G~~~~~G~~~ 1094 (1458)
|++++.|+..
T Consensus 1448 G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 GRVVEFDTPE 1457 (1622)
T ss_pred CEEEEeCCHH
Confidence 7999999863
No 18
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-65 Score=638.09 Aligned_cols=459 Identities=23% Similarity=0.320 Sum_probs=352.2
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcccEEEECCeecCCccc----cceEEEecCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDD--DLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLH 255 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~--~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~ 255 (1458)
++++|+|+|+++++||+++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++||+|++.+
T Consensus 17 ~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~ 93 (506)
T PRK13549 17 GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTY---EGEIIFEGEELQASNIRDTERAGIAIIHQELAL 93 (506)
T ss_pred CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHHCCeEEEEecccc
Confidence 34699999999999999999999999999999999999986 5 8999999998865332 3569999999989
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
++.+||+||+.+.......+. .+ ..+ ....++.+++.+||++..|+.++
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~-~~------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~ 142 (506)
T PRK13549 94 VKELSVLENIFLGNEITPGGI-MD------YDA------------------------MYLRAQKLLAQLKLDINPATPVG 142 (506)
T ss_pred CCCCcHHHHhhhcccccccCC-cC------HHH------------------------HHHHHHHHHHHcCCCCCcccchh
Confidence 999999999988643211000 00 000 01124557899999988888887
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
+ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++ .+ ++++.++|+.+++.+++|+|++
T Consensus 143 ~-----LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~-~tvi~~tH~~~~~~~~~d~v~~ 215 (506)
T PRK13549 143 N-----LGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-HG-IACIYISHKLNEVKAISDTICV 215 (506)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCcHHHHHHhcCEEEE
Confidence 7 999999999999999999999999999999999999999999999965 34 4566678889999999999999
Q ss_pred EcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhHHhh
Q 000506 416 LSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQLAND 495 (1458)
Q Consensus 416 L~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~ 495 (1458)
|++|++++.|+.+++.. .+ ..+
T Consensus 216 l~~G~i~~~~~~~~~~~---------------~~-----------------------------~~~-------------- 237 (506)
T PRK13549 216 IRDGRHIGTRPAAGMTE---------------DD-----------------------------IIT-------------- 237 (506)
T ss_pred EECCEEeeecccccCCH---------------HH-----------------------------HHH--------------
Confidence 99999998886543200 00 000
Q ss_pred hcCCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhh
Q 000506 496 LAVPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADGAKF 575 (1458)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~ 575 (1458)
+ +. + . ..
T Consensus 238 ---------------------------------~-----------------------------~~--~--~-~~------ 244 (506)
T PRK13549 238 ---------------------------------M-----------------------------MV--G--R-EL------ 244 (506)
T ss_pred ---------------------------------H-----------------------------hh--C--c-Cc------
Confidence 0 00 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHHHHH
Q 000506 576 YGALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAASRLF 655 (1458)
Q Consensus 576 ~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~ff 655 (1458)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHHhhc
Q 000506 656 RQYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVINEFL 735 (1458)
Q Consensus 656 ~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~ 735 (1458)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeecccccccc
Q 000506 736 DERWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGDKKKK 815 (1458)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 815 (1458)
. . .. + ..
T Consensus 245 ----------~---~-------------------------------------------~~-~-------------~~--- 251 (506)
T PRK13549 245 ----------T---A-------------------------------------------LY-P-------------RE--- 251 (506)
T ss_pred ----------c---c-------------------------------------------cc-c-------------cc---
Confidence 0 0 00 0 00
Q ss_pred cCCCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCe
Q 000506 816 ASGQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGV 895 (1458)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge 895 (1458)
. . . + + ...++++|+++.++. .+++.+|+|+|++|++||
T Consensus 252 ------------~-------~--~---~--~------~~~l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge 289 (506)
T PRK13549 252 ------------P-------H--T---I--G------EVILEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGE 289 (506)
T ss_pred ------------c-------c--C---C--C------CceEEEecCcccccc----------ccccccccceeeEEcCCc
Confidence 0 0 0 0 0 012566777655421 012458999999999999
Q ss_pred EEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc----cccceEEEEccCC---CCCCCCCHHHHHHHHHhh
Q 000506 896 LTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA----TFARVSGYCEQND---IHSPHVTVYESLLFSAWL 968 (1458)
Q Consensus 896 ~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTV~e~l~f~~~l 968 (1458)
++||+||||||||||+++|+|..++ +.+|+|.++|++.... ..++.+||++|++ .+++.+||.|++.+....
T Consensus 290 ~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~ 368 (506)
T PRK13549 290 ILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALD 368 (506)
T ss_pred EEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhh
Confidence 9999999999999999999998752 2689999999875421 2345689999995 467889999999875321
Q ss_pred hcCC--CCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHH
Q 000506 969 RLSS--DIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1045 (1458)
Q Consensus 969 r~~~--~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~ 1045 (1458)
.... ..+.++.++.++++++.+++. +..+..++ .|||||||||+||++|+.+|++|+|||||+|||+.++..
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~ 443 (506)
T PRK13549 369 RFTGGSRIDDAAELKTILESIQRLKVKTASPELAIA-----RLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYE 443 (506)
T ss_pred hhccCcccChHHHHHHHHHHHHhcCccCCCcccccc-----cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHH
Confidence 1110 112333446689999999996 56676654 799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCCc
Q 000506 1046 VMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGR 1095 (1458)
Q Consensus 1046 i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~~ 1095 (1458)
++++|++++++|+|||++||+++ ++.+.||++++|++ |+++..|+..+
T Consensus 444 l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 444 IYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred HHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 99999999888999999999986 57889999999985 78888887654
No 19
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-64 Score=695.99 Aligned_cols=210 Identities=21% Similarity=0.289 Sum_probs=177.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++|+||++.|+. +.+.+|+|+|++|+|||.+||+|+||||||||+++|.|..+ +.+|+|.|||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEEh
Confidence 5899999999841 12469999999999999999999999999999999999877 4789999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-------LTNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 1004 (1458)
.+ ..+|+.++||||++.+++. |+||||.+.. +.+ ++.++++++..++.+ -.|+.+|..
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1368 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG- 1368 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC-
Confidence 54 4578899999999999875 9999996531 122 234677788777754 346667653
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..+||||||||++|||||+++|+||+||||||+||+.++..|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1369 G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~- 1444 (1495)
T PLN03232 1369 GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS- 1444 (1495)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999874 5899999999975 4567999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 1445 G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 GQVLEYDSP 1453 (1495)
T ss_pred CEEEEECCH
Confidence 799999985
No 20
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-65 Score=636.59 Aligned_cols=459 Identities=22% Similarity=0.309 Sum_probs=350.3
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc----cceEEEecCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLHFG 257 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 257 (1458)
.+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++
T Consensus 17 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~ 93 (510)
T PRK09700 17 PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVID 93 (510)
T ss_pred CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccC
Confidence 346999999999999999999999999999999999999987 9999999998765432 246999999998999
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCc
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQ 337 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 337 (1458)
.+||+||+.++...... .+.. ...... + ....++.+++.+||++..|+.+++
T Consensus 94 ~~tv~e~l~~~~~~~~~--~~~~-~~~~~~----------~--------------~~~~~~~~l~~~gl~~~~~~~~~~- 145 (510)
T PRK09700 94 ELTVLENLYIGRHLTKK--VCGV-NIIDWR----------E--------------MRVRAAMMLLRVGLKVDLDEKVAN- 145 (510)
T ss_pred CCcHHHHhhhccccccc--cccc-cccCHH----------H--------------HHHHHHHHHHHcCCCCCcccchhh-
Confidence 99999999875321000 0000 000000 0 011245678999999888888877
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
|||||||||+||++|+.+|++|||||||+|||+.++.++.+.|+++++. + ++|+.++|+..++.+++|+|++|+
T Consensus 146 ----LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~-g-~tiiivsHd~~~~~~~~d~v~~l~ 219 (510)
T PRK09700 146 ----LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKE-G-TAIVYISHKLAEIRRICDRYTVMK 219 (510)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-C-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999763 4 456667888999999999999999
Q ss_pred CCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhHHhhhc
Q 000506 418 EGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQLANDLA 497 (1458)
Q Consensus 418 ~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~~ 497 (1458)
+|++++.|+++++.. .+ ..+..
T Consensus 220 ~G~i~~~g~~~~~~~---------------~~-----------------------------~~~~~-------------- 241 (510)
T PRK09700 220 DGSSVCSGMVSDVSN---------------DD-----------------------------IVRLM-------------- 241 (510)
T ss_pred CCEEeeecchhhCCH---------------HH-----------------------------HHHHh--------------
Confidence 999999887654310 00 00000
Q ss_pred CCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhhHH
Q 000506 498 VPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADGAKFYG 577 (1458)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g 577 (1458)
. + ...
T Consensus 242 --------------------------------------------------------------~--~---~~~-------- 246 (510)
T PRK09700 242 --------------------------------------------------------------V--G---REL-------- 246 (510)
T ss_pred --------------------------------------------------------------c--C---CCc--------
Confidence 0 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHHHHHHH
Q 000506 578 ALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAASRLFRQ 657 (1458)
Q Consensus 578 ~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~ff~~ 657 (1458)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK09700 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHHhhcCC
Q 000506 658 YLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVINEFLDE 737 (1458)
Q Consensus 658 ~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 737 (1458)
...+
T Consensus 247 -------------------------------------------------------------------------~~~~--- 250 (510)
T PRK09700 247 -------------------------------------------------------------------------QNRF--- 250 (510)
T ss_pred -------------------------------------------------------------------------cccc---
Confidence 0000
Q ss_pred CCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeecccccccccC
Q 000506 738 RWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGDKKKKAS 817 (1458)
Q Consensus 738 ~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (1458)
+.. .. .
T Consensus 251 ------~~~-------------------------------------------------------------~~-~------ 256 (510)
T PRK09700 251 ------NAM-------------------------------------------------------------KE-N------ 256 (510)
T ss_pred ------ccc-------------------------------------------------------------cc-c------
Confidence 000 00 0
Q ss_pred CCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEE
Q 000506 818 GQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLT 897 (1458)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ 897 (1458)
.. . + .+ +..++++|+++.+ ..+|+|+|++|++||++
T Consensus 257 ----------~~------~------~-~~------~~~l~~~~l~~~~---------------~~~l~~isl~i~~Ge~~ 292 (510)
T PRK09700 257 ----------VS------N------L-AH------ETVFEVRNVTSRD---------------RKKVRDISFSVCRGEIL 292 (510)
T ss_pred ----------cc------c------C-CC------CcEEEEeCccccC---------------CCcccceeEEEcCCcEE
Confidence 00 0 0 00 0136677776431 12799999999999999
Q ss_pred EEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc----cccceEEEEccC---CCCCCCCCHHHHHHHHHhhh-
Q 000506 898 ALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA----TFARVSGYCEQN---DIHSPHVTVYESLLFSAWLR- 969 (1458)
Q Consensus 898 al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~---~~~~~~lTV~e~l~f~~~lr- 969 (1458)
+|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.+|||+|+ ..+++.+||.|++.+....+
T Consensus 293 ~l~G~NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~ 370 (510)
T PRK09700 293 GFAGLVGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKD 370 (510)
T ss_pred EEECCCCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhcccccccc
Confidence 9999999999999999999876 4789999999875321 234579999998 45788999999998753221
Q ss_pred --cCC--C-CCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000506 970 --LSS--D-IDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1043 (1458)
Q Consensus 970 --~~~--~-~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~ 1043 (1458)
... . ...+..++.++++++.+++. +..++.++ .|||||||||+||++|+.+|+||+|||||+|||+.++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~ 445 (510)
T PRK09700 371 GGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNIT-----ELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAK 445 (510)
T ss_pred ccccccccccChHHHHHHHHHHHHhcCCCCCCccCccc-----cCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHH
Confidence 000 0 11223335678999999997 67777654 7999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1044 AIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1044 ~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
..+++.|++++++|.|||+++|++. ++.+.||++++|++ |+++..++.
T Consensus 446 ~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 446 AEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 9999999999888999999999986 57889999999986 688887765
No 21
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.2e-64 Score=632.77 Aligned_cols=450 Identities=22% Similarity=0.344 Sum_probs=348.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc----cceEEEecCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLHFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 258 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999988 9999999998754321 3569999999989999
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||+||+.|+.......... ...+ ....++.+++.+||++..|..+++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~------~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-- 141 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRI------DWKK------------------------MYAEADKLLARLNLRFSSDKLVGE-- 141 (501)
T ss_pred CcHHHHhhhccccccccCcc------CHHH------------------------HHHHHHHHHHHcCCCCCccCchhh--
Confidence 99999998864321000000 0000 011235578999999988888887
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++. + ++|+.++|+.+++.+++|+|++|++
T Consensus 142 ---LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~-~-~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 142 ---LSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQ-G-RGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999999999999999999653 4 5566678888999999999999999
Q ss_pred CeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhHHhhhcC
Q 000506 419 GQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQLANDLAV 498 (1458)
Q Consensus 419 G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~~~ 498 (1458)
|+++..|+.+++.. ++..+.+
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~~--------------- 237 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEMM--------------- 237 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHHh---------------
Confidence 99998776533200 0000000
Q ss_pred CcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhhHHH
Q 000506 499 PYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADGAKFYGA 578 (1458)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~ 578 (1458)
+ + ...
T Consensus 238 -------------------------------------------------------------~--~---~~~--------- 242 (501)
T PRK10762 238 -------------------------------------------------------------V--G---RKL--------- 242 (501)
T ss_pred -------------------------------------------------------------c--C---CCc---------
Confidence 0 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHH
Q 000506 579 LFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAASRLFRQY 658 (1458)
Q Consensus 579 lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 658 (1458)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHHhhcCCC
Q 000506 659 LAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVINEFLDER 738 (1458)
Q Consensus 659 l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 738 (1458)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeecccccccccCC
Q 000506 739 WSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGDKKKKASG 818 (1458)
Q Consensus 739 ~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1458)
. .. . . .
T Consensus 243 -~----~~-------------------------------------------------------~------~-~------- 248 (501)
T PRK10762 243 -E----DQ-------------------------------------------------------Y------P-R------- 248 (501)
T ss_pred -c----cc-------------------------------------------------------c------c-c-------
Confidence 0 00 0 0 0
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEE
Q 000506 819 QPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTA 898 (1458)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 898 (1458)
. . . + + .+..++++|++. .+|+|+|++|++||+++
T Consensus 249 ----~----~-------~------~------~-~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge~~~ 282 (501)
T PRK10762 249 ----L----D-------K------A------P-GEVRLKVDNLSG------------------PGVNDVSFTLRKGEILG 282 (501)
T ss_pred ----c----c-------c------C------C-CCcEEEEeCccc------------------CCcccceEEEcCCcEEE
Confidence 0 0 0 0 0 001355666541 26999999999999999
Q ss_pred EecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc----cccceEEEEccCC---CCCCCCCHHHHHHHHHhhhcC
Q 000506 899 LMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA----TFARVSGYCEQND---IHSPHVTVYESLLFSAWLRLS 971 (1458)
Q Consensus 899 l~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTV~e~l~f~~~lr~~ 971 (1458)
|+|||||||||||++|+|..+ +.+|+|.++|.+.... ..++.+||++|++ .+++.+||.|++.+.......
T Consensus 283 liG~NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~ 360 (501)
T PRK10762 283 VSGLMGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFS 360 (501)
T ss_pred EecCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhc
Confidence 999999999999999999876 4789999999876421 2345799999996 477889999999875321110
Q ss_pred C---CCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHH
Q 000506 972 S---DIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1047 (1458)
Q Consensus 972 ~---~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~ 1047 (1458)
. ....++.++.++++++.+++. +..++.++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+.
T Consensus 361 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~ 435 (501)
T PRK10762 361 RAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAIG-----LLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIY 435 (501)
T ss_pred ccccccCHHHHHHHHHHHHHhcCCCCCCccCchh-----hCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHH
Confidence 0 112233445688999999995 56776654 79999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCCc
Q 000506 1048 RTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGR 1095 (1458)
Q Consensus 1048 ~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~~ 1095 (1458)
+.|++++++|+|||++||++. ++.+.||++++|++ |+++..|+...
T Consensus 436 ~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 436 QLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred HHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 999999888999999999986 57889999999985 78888887654
No 22
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.5e-64 Score=682.77 Aligned_cols=216 Identities=21% Similarity=0.352 Sum_probs=179.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC-------------
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------- 921 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~------------- 921 (1458)
.++|+||+|.|+.. ++.++|+|+|++|+||+.+||+||||||||||+++|.|...+.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 58999999998531 1246999999999999999999999999999999999987641
Q ss_pred ---------------------------------------ceeeEEEECCeeCCc---ccccceEEEEccCCCCCCCCCHH
Q 000506 922 ---------------------------------------YTEGDISISGYPKNQ---ATFARVSGYCEQNDIHSPHVTVY 959 (1458)
Q Consensus 922 ---------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTV~ 959 (1458)
+.+|+|++||+++.. ..+++.+|||+|++.+| ..|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHH
Confidence 158999999998643 46788999999999988 57999
Q ss_pred HHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-------ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000506 960 ESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-------PLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMD 1032 (1458)
Q Consensus 960 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1032 (1458)
|||.|+. .+.+. +.++++++..++. +-.||.+|..| ..||||||||++|||||+++|+||+||
T Consensus 1314 eNI~~g~-----~~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G-~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK-----EDATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPYG-KSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC-----CCCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999862 12232 2356666666553 44588898544 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhhceEEEEecC---cE-EEEeCCC
Q 000506 1033 EPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLMKRG---GQ-VIYAGPL 1093 (1458)
Q Consensus 1033 EPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g---G~-~~~~G~~ 1093 (1458)
||||+||+.+++.|++.|+++. .+++|+|+++|+++ ..+.+|+|++|++| |+ ++..|+.
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999986 36899999999975 56789999999872 56 5578874
No 23
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-63 Score=635.51 Aligned_cols=488 Identities=20% Similarity=0.235 Sum_probs=356.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCC----------cc------c-cce
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKE----------FV------P-QRT 245 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~----------~~------~-~~~ 245 (1458)
.++|+|||+++++||+++|+||||||||||+++|+|+++|+ +|+|.++|..+.. .. . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999987 9999999874421 01 1 246
Q ss_pred EEEecCCC--CCCCCCCHHHHHHHhhhhc-cCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHH
Q 000506 246 CAYISQND--LHFGEMTVRETMDFSGRCL-GVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLK 322 (1458)
Q Consensus 246 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~ 322 (1458)
+|||+|++ .+++.+||+||+.++.+.. +.. +.+ ....++.+++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------REE------------------------AMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHH
Confidence 99999997 6788899999999875532 111 000 0112455789
Q ss_pred HcCCcc---cccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEE
Q 000506 323 LLGLDI---CADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSL 399 (1458)
Q Consensus 323 ~lgL~~---~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~ 399 (1458)
.+||++ ..+..+.+ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++..+ ++|+.+
T Consensus 152 ~~gL~~~~~~~~~~~~~-----LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g-~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILSRYPHQ-----LSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMS-MGVIFI 225 (623)
T ss_pred HCCCCChhhHHhCCCcc-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcC-CEEEEE
Confidence 999964 45677766 999999999999999999999999999999999999999999999976434 556778
Q ss_pred eCChhHHHhccCEEEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHH
Q 000506 400 LQPAPEAYDLFDNIILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDF 479 (1458)
Q Consensus 400 ~q~~~~~~~~~D~v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~ 479 (1458)
+|+..++.+++|+|++|++|++++.|+++++.. .|......++
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l----------------------------- 268 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRAL----------------------------- 268 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhh-----------------------------
Confidence 899999999999999999999999998876521 0000000000
Q ss_pred HHhhhcchhhhhHHhhhcCCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHH
Q 000506 480 VQGFSSFHVGQQLANDLAVPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVF 559 (1458)
Q Consensus 480 ~~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf 559 (1458)
... . +
T Consensus 269 ~~~-------------~--~------------------------------------------------------------ 273 (623)
T PRK10261 269 LAA-------------V--P------------------------------------------------------------ 273 (623)
T ss_pred hhc-------------c--C------------------------------------------------------------
Confidence 000 0 0
Q ss_pred hccCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHH
Q 000506 560 FRTEMPVGNVADGAKFYGALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVC 639 (1458)
Q Consensus 560 ~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~ 639 (1458)
+. .....
T Consensus 274 -~~----~~~~~-------------------------------------------------------------------- 280 (623)
T PRK10261 274 -QL----GAMKG-------------------------------------------------------------------- 280 (623)
T ss_pred -cc----ccccc--------------------------------------------------------------------
Confidence 00 00000
Q ss_pred HHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHH
Q 000506 640 LTYYTIGFAPAASRLFRQYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYV 719 (1458)
Q Consensus 640 i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~i 719 (1458)
T Consensus 281 -------------------------------------------------------------------------------- 280 (623)
T PRK10261 281 -------------------------------------------------------------------------------- 280 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Q 000506 720 SPMMYGQNAIVINEFLDERWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLG 799 (1458)
Q Consensus 720 sp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~ 799 (1458)
.......+..
T Consensus 281 -----------------~~~~~~~~~~----------------------------------------------------- 290 (623)
T PRK10261 281 -----------------LDYPRRFPLI----------------------------------------------------- 290 (623)
T ss_pred -----------------ccCCcccccc-----------------------------------------------------
Confidence 0000000000
Q ss_pred CCCCceeecccccccccCCCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccc
Q 000506 800 KAKPTVIEEDGDKKKKASGQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEED 879 (1458)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 879 (1458)
.. .. .... .. .. . . .. .+ .+ ...++++|+++.++..... .....+
T Consensus 291 --~~----~~-~~~~-~~----~~-----~-~----~~----~~-~~------~~~L~~~~l~~~y~~~~~~--~~~~~~ 335 (623)
T PRK10261 291 --SL----EH-PAKQ-EP----PI-----E-Q----DT----VV-DG------EPILQVRNLVTRFPLRSGL--LNRVTR 335 (623)
T ss_pred --cc----cc-cccc-Cc----cc-----c-c----cc----cc-CC------CceEEEeeeEEEEcCCCcc--ccccCC
Confidence 00 00 0000 00 00 0 0 00 00 00 1147889998877421000 000001
Q ss_pred cceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc------cccceEEEEccCC--C
Q 000506 880 RLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA------TFARVSGYCEQND--I 951 (1458)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~--~ 951 (1458)
.+.+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++... .+++.++||+|++ .
T Consensus 336 ~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~ 413 (623)
T PRK10261 336 EVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYAS 413 (623)
T ss_pred ceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhh
Confidence 2469999999999999999999999999999999999976 4789999999876321 2456799999997 5
Q ss_pred CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000506 952 HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIF 1030 (1458)
Q Consensus 952 ~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~ill 1030 (1458)
+++.+||.|++.+....+. ....++.+++++++++.+||. +..++.+ ..|||||||||+||+||+.+|+|||
T Consensus 414 l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~-----~~LSgGqrQRv~iAraL~~~p~lll 486 (623)
T PRK10261 414 LDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYP-----HEFSGGQRQRICIARALALNPKVII 486 (623)
T ss_pred cCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 7889999999987643321 112344556789999999996 4566654 4799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1031 MDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1031 LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
|||||+|||+.++..++++|++++++ |.|||++||+++ .+.+.||++++|.+ |++++.|+..
T Consensus 487 lDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~~ 549 (623)
T PRK10261 487 ADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPRR 549 (623)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999775 899999999986 57788999999985 7999998853
No 24
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=6.7e-64 Score=626.53 Aligned_cols=454 Identities=21% Similarity=0.301 Sum_probs=347.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc----cceEEEecCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLHFG 257 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 257 (1458)
++++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 23 ~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 99 (510)
T PRK15439 23 GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFP 99 (510)
T ss_pred CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCC
Confidence 346999999999999999999999999999999999999988 9999999998764332 246999999999999
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCc
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQ 337 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 337 (1458)
.+||+||+.|.... .+ + ....++.+++.+||++..++.+++
T Consensus 100 ~~tv~e~l~~~~~~------~~---~-----------------------------~~~~~~~~l~~~~l~~~~~~~~~~- 140 (510)
T PRK15439 100 NLSVKENILFGLPK------RQ---A-----------------------------SMQKMKQLLAALGCQLDLDSSAGS- 140 (510)
T ss_pred CCcHHHHhhccccc------ch---H-----------------------------HHHHHHHHHHHcCCCccccCChhh-
Confidence 99999999874320 00 0 001234578999999888888877
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++++. + ++|+.++|+.+++.++||+|++|+
T Consensus 141 ----LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-g-~tiiivtHd~~~~~~~~d~i~~l~ 214 (510)
T PRK15439 141 ----LEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQ-G-VGIVFISHKLPEIRQLADRISVMR 214 (510)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999753 4 566677888999999999999999
Q ss_pred CCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhHHhhhc
Q 000506 418 EGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQLANDLA 497 (1458)
Q Consensus 418 ~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~~ 497 (1458)
+|++++.|+++++... +.+ +.+..
T Consensus 215 ~G~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~~------------ 238 (510)
T PRK15439 215 DGTIALSGKTADLSTD---------------DII-----------------------------QAITP------------ 238 (510)
T ss_pred CCEEEEecChHHcCHH---------------HHH-----------------------------HHHhC------------
Confidence 9999999987654210 000 00000
Q ss_pred CCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhhHH
Q 000506 498 VPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADGAKFYG 577 (1458)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g 577 (1458)
. ... .....
T Consensus 239 ~-----~~~------------------------------------------------------------~~~~~------ 247 (510)
T PRK15439 239 A-----ARE------------------------------------------------------------KSLSA------ 247 (510)
T ss_pred c-----ccc------------------------------------------------------------ccccc------
Confidence 0 000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHHHHHHH
Q 000506 578 ALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAASRLFRQ 657 (1458)
Q Consensus 578 ~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~ff~~ 657 (1458)
..
T Consensus 248 ------------------------------~~------------------------------------------------ 249 (510)
T PRK15439 248 ------------------------------SQ------------------------------------------------ 249 (510)
T ss_pred ------------------------------cc------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHHhhcCC
Q 000506 658 YLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVINEFLDE 737 (1458)
Q Consensus 658 ~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 737 (1458)
T Consensus 250 -------------------------------------------------------------------------------- 249 (510)
T PRK15439 250 -------------------------------------------------------------------------------- 249 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeecccccccccC
Q 000506 738 RWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGDKKKKAS 817 (1458)
Q Consensus 738 ~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (1458)
... . .. . ..
T Consensus 250 ~~~-----~--------------------------------------------------~~----------~-~~----- 258 (510)
T PRK15439 250 KLW-----L--------------------------------------------------EL----------P-GN----- 258 (510)
T ss_pred ccc-----c--------------------------------------------------cc----------c-cc-----
Confidence 000 0 00 0 00
Q ss_pred CCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEE
Q 000506 818 GQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLT 897 (1458)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ 897 (1458)
. . . . + .+ +..++++|++. .+|+|||++|++||++
T Consensus 259 ----------~--~----~--~---~-~~------~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~ 292 (510)
T PRK15439 259 ----------R--R----Q--Q---A-AG------APVLTVEDLTG------------------EGFRNISLEVRAGEIL 292 (510)
T ss_pred ----------c--c----c--c---C-CC------CceEEEeCCCC------------------CCccceeEEEcCCcEE
Confidence 0 0 0 0 0 00 01356666651 1589999999999999
Q ss_pred EEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc----cccceEEEEccCC---CCCCCCCHHHHHHHHHhhhc
Q 000506 898 ALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA----TFARVSGYCEQND---IHSPHVTVYESLLFSAWLRL 970 (1458)
Q Consensus 898 al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTV~e~l~f~~~lr~ 970 (1458)
||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+++.+||.|++......+.
T Consensus 293 ~l~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~ 370 (510)
T PRK15439 293 GLAGVVGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRR 370 (510)
T ss_pred EEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhh
Confidence 9999999999999999999876 4689999999876431 1245699999984 47788999999864211111
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHH
Q 000506 971 SSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1049 (1458)
Q Consensus 971 ~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~ 1049 (1458)
.........++.++++++.+++. +..++.+ +.|||||||||+||++|+.+|+||||||||+|||+.+...+++.
T Consensus 371 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~ 445 (510)
T PRK15439 371 GFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQL 445 (510)
T ss_pred ccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHH
Confidence 11011222345688999999997 6677765 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1050 VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1050 l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
|++++++|.|||+++|++. ++.+.||++++|++ |++++.|..+
T Consensus 446 l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 446 IRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred HHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 9999888999999999986 68889999999985 7888888654
No 25
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.2e-63 Score=624.51 Aligned_cols=461 Identities=21% Similarity=0.297 Sum_probs=347.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc----cceEEEecCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLHFG 257 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 257 (1458)
++++|+|+|+++++||+++|+|||||||||||++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++
T Consensus 13 ~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (500)
T TIGR02633 13 GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVP 91 (500)
T ss_pred CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCC
Confidence 356999999999999999999999999999999999998761 128999999998765332 356999999998999
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccc-cccccC
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICA-DTMVGD 336 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~-dt~vg~ 336 (1458)
.+||+||+.+.......+...+ .. + ....++.+++.+||.+.. ++.+++
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~~ 141 (500)
T TIGR02633 92 ELSVAENIFLGNEITLPGGRMA------YN----------A--------------MYLRAKNLLRELQLDADNVTRPVGD 141 (500)
T ss_pred CCcHHHHHHhhccccccccccC------HH----------H--------------HHHHHHHHHHHcCCCCCcccCchhh
Confidence 9999999988643210000000 00 0 011245578999998764 566776
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ . +++|+.++|+.+++.++||+|++|
T Consensus 142 -----LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tviiitHd~~~~~~~~d~i~~l 214 (500)
T TIGR02633 142 -----YGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-H-GVACVYISHKLNEVKAVCDTICVI 214 (500)
T ss_pred -----CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCcHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999975 3 456667788899999999999999
Q ss_pred cCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhHHhhh
Q 000506 417 SEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQLANDL 496 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~ 496 (1458)
++|++++.|+++++.. ++...
T Consensus 215 ~~G~i~~~~~~~~~~~--------------------------------------------~~~~~--------------- 235 (500)
T TIGR02633 215 RDGQHVATKDMSTMSE--------------------------------------------DDIIT--------------- 235 (500)
T ss_pred eCCeEeeecCcccCCH--------------------------------------------HHHHH---------------
Confidence 9999987664321100 00000
Q ss_pred cCCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhhH
Q 000506 497 AVPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADGAKFY 576 (1458)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~ 576 (1458)
+ +.... .
T Consensus 236 --------------------------------~-----------------------------~~~~~-----~------- 242 (500)
T TIGR02633 236 --------------------------------M-----------------------------MVGRE-----I------- 242 (500)
T ss_pred --------------------------------H-----------------------------HhCcc-----c-------
Confidence 0 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHHHHHH
Q 000506 577 GALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAASRLFR 656 (1458)
Q Consensus 577 g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~ff~ 656 (1458)
T Consensus 243 -------------------------------------------------------------------------------- 242 (500)
T TIGR02633 243 -------------------------------------------------------------------------------- 242 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHHhhcC
Q 000506 657 QYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVINEFLD 736 (1458)
Q Consensus 657 ~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~ 736 (1458)
+
T Consensus 243 -----------------------------------------------------~-------------------------- 243 (500)
T TIGR02633 243 -----------------------------------------------------T-------------------------- 243 (500)
T ss_pred -----------------------------------------------------c--------------------------
Confidence 0
Q ss_pred CCCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeeccccccccc
Q 000506 737 ERWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGDKKKKA 816 (1458)
Q Consensus 737 ~~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1458)
.. . . .
T Consensus 244 --------~~---------------------------------------------------~----------~-~----- 248 (500)
T TIGR02633 244 --------SL---------------------------------------------------Y----------P-H----- 248 (500)
T ss_pred --------cc---------------------------------------------------c----------c-c-----
Confidence 00 0 0 0
Q ss_pred CCCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeE
Q 000506 817 SGQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVL 896 (1458)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~ 896 (1458)
. . . + .+ ...++++|+++.+.. .+++.+|+|+|++|++||+
T Consensus 249 ------~----~--~-----------~-~~------~~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~Ge~ 288 (500)
T TIGR02633 249 ------E----P--H-----------E-IG------DVILEARNLTCWDVI----------NPHRKRVDDVSFSLRRGEI 288 (500)
T ss_pred ------c----c--c-----------C-CC------CceEEEeCCcccccc----------cccccccccceeEEeCCcE
Confidence 0 0 0 0 00 013567777654310 0124589999999999999
Q ss_pred EEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc----ccccceEEEEccCC---CCCCCCCHHHHHHHHHhhh
Q 000506 897 TALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ----ATFARVSGYCEQND---IHSPHVTVYESLLFSAWLR 969 (1458)
Q Consensus 897 ~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTV~e~l~f~~~lr 969 (1458)
++|+|||||||||||++|+|..++ +.+|+|.++|++... ...++.+||++|+. .+++.+||+|++.++..-.
T Consensus 289 ~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~ 367 (500)
T TIGR02633 289 LGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKS 367 (500)
T ss_pred EEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhh
Confidence 999999999999999999998752 258999999987642 12356799999995 5788999999998753211
Q ss_pred cC--CCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHH
Q 000506 970 LS--SDIDSKTRKMFVDEVMDLVELEP-LTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1046 (1458)
Q Consensus 970 ~~--~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i 1046 (1458)
.. ........++.++++++.+++.+ ..++.++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l 442 (500)
T TIGR02633 368 FCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIG-----RLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEI 442 (500)
T ss_pred hccCCcCCHHHHHHHHHHHHHhcCccCCCccCccc-----cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHH
Confidence 10 11222334566889999999964 4666654 7999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1047 MRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1047 ~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
++.|++++++|.|||++||+++ ++.+.||++++|.+ |+++..++..
T Consensus 443 ~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 443 YKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred HHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 9999999888999999999986 57889999999985 6888777543
No 26
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.2e-63 Score=625.50 Aligned_cols=464 Identities=20% Similarity=0.281 Sum_probs=348.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCeecCCccc-------cceEEEecCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD--LKLTGKIKYCGHEFKEFVP-------QRTCAYISQND 253 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 253 (1458)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++..... ++.++||+|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999999861 0128999999998754321 24699999996
Q ss_pred C--CCCCCCHHHHHHHhhhhc-cCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc--
Q 000506 254 L--HFGEMTVRETMDFSGRCL-GVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI-- 328 (1458)
Q Consensus 254 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-- 328 (1458)
. +++.+||+|++.+..... +.. +.+ ....++.+++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------REA------------------------ARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHHHCCCCChH
Confidence 4 567789999987643211 100 000 0113456789999976
Q ss_pred -cccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHH
Q 000506 329 -CADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAY 407 (1458)
Q Consensus 329 -~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~ 407 (1458)
..|+.+++ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+ .+|+.++|+.+++.
T Consensus 148 ~~~~~~~~~-----LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDYPHQ-----LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELN-MGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhCCcc-----cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcC-CeEEEEcCcHHHHH
Confidence 35777776 999999999999999999999999999999999999999999999976434 45666788889999
Q ss_pred hccCEEEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcch
Q 000506 408 DLFDNIILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFH 487 (1458)
Q Consensus 408 ~~~D~v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~ 487 (1458)
+++|+|++|++|++++.|+++++.+. |.. ..
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~---------------------------------~~-------- 252 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PTH---------------------------------PY-------- 252 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CCC---------------------------------HH--------
Confidence 99999999999999999987654210 000 00
Q ss_pred hhhhHHhhhcCCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 000506 488 VGQQLANDLAVPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVG 567 (1458)
Q Consensus 488 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~ 567 (1458)
.+.+ +...
T Consensus 253 ----------------------------------------~~~~----------------------------~~~~---- 260 (529)
T PRK15134 253 ----------------------------------------TQKL----------------------------LNSE---- 260 (529)
T ss_pred ----------------------------------------HHHH----------------------------HHhC----
Confidence 0000 0000
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCc
Q 000506 568 NVADGAKFYGALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGF 647 (1458)
Q Consensus 568 ~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~ 647 (1458)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHH
Q 000506 648 APAASRLFRQYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQN 727 (1458)
Q Consensus 648 ~~~~~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~ 727 (1458)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcCCCCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceee
Q 000506 728 AIVINEFLDERWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIE 807 (1458)
Q Consensus 728 al~~nef~~~~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~ 807 (1458)
. .. .
T Consensus 261 ---------------~-~~-------------------------------------------------~----------- 264 (529)
T PRK15134 261 ---------------P-SG-------------------------------------------------D----------- 264 (529)
T ss_pred ---------------c-cc-------------------------------------------------c-----------
Confidence 0 00 0
Q ss_pred cccccccccCCCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccc
Q 000506 808 EDGDKKKKASGQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDV 887 (1458)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~v 887 (1458)
. . .. . + .+ +..++++|+++.++...+. .+...+.+.+|+||
T Consensus 265 -~-~----------------~~-~-----------~-~~------~~~l~~~~l~~~~~~~~~~--~~~~~~~~~il~~i 305 (529)
T PRK15134 265 -P-V----------------PL-P-----------E-PA------SPLLDVEQLQVAFPIRKGI--LKRTVDHNVVVKNI 305 (529)
T ss_pred -c-c----------------cc-C-----------C-CC------CCcccccCcEEEeecCccc--cccccccceeeecc
Confidence 0 0 00 0 0 00 0024556666655310000 00000124699999
Q ss_pred eeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc------cccceEEEEccCC--CCCCCCCHH
Q 000506 888 SGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA------TFARVSGYCEQND--IHSPHVTVY 959 (1458)
Q Consensus 888 s~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~--~~~~~lTV~ 959 (1458)
|++|++||++||+||||||||||+++|+|..+ .+|+|+++|.+.... .+++.+||++|++ .+++.+||+
T Consensus 306 sl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~ 382 (529)
T PRK15134 306 SFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVL 382 (529)
T ss_pred eeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHH
Confidence 99999999999999999999999999999873 589999999875321 1346799999997 477889999
Q ss_pred HHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000506 960 ESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1458)
Q Consensus 960 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1038 (1458)
|++.++...+.. ..+.++.++.++++++.++|. +..+..+ ..|||||||||+||++|+.+|++|+|||||+||
T Consensus 383 e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~L 456 (529)
T PRK15134 383 QIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYP-----AEFSGGQRQRIAIARALILKPSLIILDEPTSSL 456 (529)
T ss_pred HHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCC-----ccCCHHHHHHHHHHHHHhCCCCEEEeeCCcccc
Confidence 999886533211 122344456788999999997 4566654 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
|+.++..+++.|++++++ |+|||++||++. ++.+.||++++|++ |+++..|+.
T Consensus 457 D~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 457 DKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred CHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 999999999999999875 899999999986 57788999999985 789888875
No 27
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.9e-63 Score=625.33 Aligned_cols=446 Identities=24% Similarity=0.335 Sum_probs=345.2
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCcccEEEECC-----------------------ee
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKL--DDDLKLTGKIKYCG-----------------------HE 236 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~--~~~~~~~G~I~~~G-----------------------~~ 236 (1458)
++++|+|+|+.+++||+++|+|||||||||||++|+|.+ +|+ +|+|.++| .+
T Consensus 12 ~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 88 (520)
T TIGR03269 12 GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGT 88 (520)
T ss_pred CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEecccccccccccccccccccccccccc
Confidence 346999999999999999999999999999999999997 576 89999972 22
Q ss_pred cC-------Cc------cccceEEEecCC-CCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHH
Q 000506 237 FK-------EF------VPQRTCAYISQN-DLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAY 302 (1458)
Q Consensus 237 ~~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~ 302 (1458)
+. .. ..++.++||+|+ +.+++.+||+||+.|.....+... .+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~----------~~-------------- 144 (520)
T TIGR03269 89 LEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEG----------KE-------------- 144 (520)
T ss_pred ccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCH----------HH--------------
Confidence 11 00 113569999997 678888999999988654322100 00
Q ss_pred HHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHH
Q 000506 303 MKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICK 382 (1458)
Q Consensus 303 ~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~ 382 (1458)
....++.+++.+||++..+..+++ |||||||||+||+||+.+|++|||||||+|||+.++.++.+
T Consensus 145 ----------~~~~~~~~l~~~gl~~~~~~~~~~-----LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~ 209 (520)
T TIGR03269 145 ----------AVGRAVDLIEMVQLSHRITHIARD-----LSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHN 209 (520)
T ss_pred ----------HHHHHHHHHHHcCChhhhhcCccc-----CCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHH
Confidence 011245688999999888888777 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhh
Q 000506 383 YMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQ 462 (1458)
Q Consensus 383 ~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~ 462 (1458)
.|+++++..+ ++|+.++|+.+.+.+++|+|++|++|++++.|+++++.+.+.
T Consensus 210 ~l~~l~~~~g-~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~--------------------------- 261 (520)
T TIGR03269 210 ALEEAVKASG-ISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFM--------------------------- 261 (520)
T ss_pred HHHHHHHhcC-cEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHH---------------------------
Confidence 9999976434 556777888899999999999999999998887654311000
Q ss_pred hhhccCCCCccCCHHHHHHhhhcchhhhhHHhhhcCCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHH
Q 000506 463 YWFRKDQPYRYISVSDFVQGFSSFHVGQQLANDLAVPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYI 542 (1458)
Q Consensus 463 ~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~ 542 (1458)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHH
Q 000506 543 FKTSQITIMSLIALTVFFRTEMPVGNVADGAKFYGALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPI 622 (1458)
Q Consensus 543 ~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~ 622 (1458)
. ..
T Consensus 262 --------------------~----~~----------------------------------------------------- 264 (520)
T TIGR03269 262 --------------------E----GV----------------------------------------------------- 264 (520)
T ss_pred --------------------h----hc-----------------------------------------------------
Confidence 0 00
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhe
Q 000506 623 FVLRIPLSILESAIWVCLTYYTIGFAPAASRLFRQYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGF 702 (1458)
Q Consensus 623 ~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf 702 (1458)
T Consensus 265 -------------------------------------------------------------------------------- 264 (520)
T TIGR03269 265 -------------------------------------------------------------------------------- 264 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCCCchhHHHHHHHHcHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHH
Q 000506 703 VIAKDDIEPFMIWGYYVSPMMYGQNAIVINEFLDERWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTI 782 (1458)
Q Consensus 703 ~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i 782 (1458)
+ .. .
T Consensus 265 -------~----------------------~~---------------~-------------------------------- 268 (520)
T TIGR03269 265 -------S----------------------EV---------------E-------------------------------- 268 (520)
T ss_pred -------h----------------------hh---------------c--------------------------------
Confidence 0 00 0
Q ss_pred HHHHHHHHHHHhhCCCCCCCCceeecccccccccCCCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeee
Q 000506 783 LFNILFIAAIQFLNPLGKAKPTVIEEDGDKKKKASGQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVN 862 (1458)
Q Consensus 783 ~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~ 862 (1458)
. . . .. + .+ ...++++|++
T Consensus 269 -----------------~--------~-~----------------~~-------------~-~~------~~~l~~~~l~ 286 (520)
T TIGR03269 269 -----------------K--------E-C----------------EV-------------E-VG------EPIIKVRNVS 286 (520)
T ss_pred -----------------c--------c-c----------------cc-------------C-CC------CceEEEeccE
Confidence 0 0 0 00 0 00 0136777887
Q ss_pred eEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEEC-Cee---CCc--
Q 000506 863 YSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISIS-GYP---KNQ-- 936 (1458)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~-g~~---~~~-- 936 (1458)
+.++.. ..+.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++ |.+ ...
T Consensus 287 ~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~ 356 (520)
T TIGR03269 287 KRYISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPG 356 (520)
T ss_pred EEeccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccc
Confidence 766310 0112469999999999999999999999999999999999876 478999996 532 111
Q ss_pred ----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-----cccccccCCCCCC
Q 000506 937 ----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-----LTNAMVGLPGVDG 1007 (1458)
Q Consensus 937 ----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~vg~~~~~~ 1007 (1458)
...++.+||++|++.+++.+||.|++.+...+. .+.+..++.++++++.++|.+ ..++.+ ..
T Consensus 357 ~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~-----~~ 427 (520)
T TIGR03269 357 PDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKYP-----DE 427 (520)
T ss_pred hhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCCh-----hh
Confidence 123456999999998889999999998754321 223334456889999999975 345554 47
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1008 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
|||||||||+||+||+.+|+||+|||||+|||+.+...+++.|++++++ |.|||+++|++. .+.+.||++++|++ |+
T Consensus 428 LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~ 505 (520)
T TIGR03269 428 LSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GK 505 (520)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999986 57788999999985 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
++..|+.
T Consensus 506 i~~~g~~ 512 (520)
T TIGR03269 506 IVKIGDP 512 (520)
T ss_pred EEEECCH
Confidence 8888874
No 28
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-63 Score=621.10 Aligned_cols=451 Identities=22% Similarity=0.312 Sum_probs=345.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc----ccceEEEecCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV----PQRTCAYISQNDLHFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 258 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++.... .++.++||+|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 46999999999999999999999999999999999999987 999999999875322 24579999999989999
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||+||+.++......+. .... + ....++.+++.+||++..++.+++
T Consensus 94 ~tv~~~l~~~~~~~~~~~-------~~~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI-------VNRR----------L--------------LNYEAREQLEHLGVDIDPDTPLKY-- 140 (501)
T ss_pred CCHHHHHHhcccccccCC-------CCHH----------H--------------HHHHHHHHHHHcCCCCCcCCchhh--
Confidence 999999988532100000 0000 0 011235578999998877888776
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++. + ++|+.++|+.+++.+++|+|++|++
T Consensus 141 ---LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-g-~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 141 ---LSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAE-G-RVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred ---CCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhC-C-CEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998653 4 5666778888999999999999999
Q ss_pred CeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhHHhhhcC
Q 000506 419 GQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQLANDLAV 498 (1458)
Q Consensus 419 G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~~~ 498 (1458)
|+++..++..+. .+.++..+.
T Consensus 216 G~i~~~~~~~~~-------------------------------------------~~~~~~~~~---------------- 236 (501)
T PRK11288 216 GRYVATFDDMAQ-------------------------------------------VDRDQLVQA---------------- 236 (501)
T ss_pred CEEEeecCcccc-------------------------------------------CCHHHHHHH----------------
Confidence 999864431100 000000000
Q ss_pred CcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhhHHH
Q 000506 499 PYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADGAKFYGA 578 (1458)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~ 578 (1458)
+. . ...
T Consensus 237 ------------------------------------------------------------~~--~---~~~--------- 242 (501)
T PRK11288 237 ------------------------------------------------------------MV--G---REI--------- 242 (501)
T ss_pred ------------------------------------------------------------hc--C---CCc---------
Confidence 00 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHH
Q 000506 579 LFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAASRLFRQY 658 (1458)
Q Consensus 579 lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 658 (1458)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHHhhcCCC
Q 000506 659 LAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVINEFLDER 738 (1458)
Q Consensus 659 l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 738 (1458)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeecccccccccCC
Q 000506 739 WSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGDKKKKASG 818 (1458)
Q Consensus 739 ~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1458)
.. . . .
T Consensus 243 ------~~--------------------------------------------------~-----------~-~------- 247 (501)
T PRK11288 243 ------GD--------------------------------------------------I-----------Y-G------- 247 (501)
T ss_pred ------cc--------------------------------------------------c-----------c-c-------
Confidence 00 0 0 0
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEE
Q 000506 819 QPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTA 898 (1458)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 898 (1458)
..+. + .+ +..++++|+++ ..+|+|+|++|++||++|
T Consensus 248 ---------~~~~-----------~-~~------~~~l~~~~~~~-----------------~~~l~~isl~i~~Ge~~~ 283 (501)
T PRK11288 248 ---------YRPR-----------P-LG------EVRLRLDGLKG-----------------PGLREPISFSVRAGEIVG 283 (501)
T ss_pred ---------cccc-----------C-CC------CcEEEEecccc-----------------CCcccceeEEEeCCcEEE
Confidence 0000 0 00 11356666652 138999999999999999
Q ss_pred EecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc----ccccceEEEEccCC---CCCCCCCHHHHHHHHHhhhc-
Q 000506 899 LMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ----ATFARVSGYCEQND---IHSPHVTVYESLLFSAWLRL- 970 (1458)
Q Consensus 899 l~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTV~e~l~f~~~lr~- 970 (1458)
|+||||||||||+++|+|..+ +.+|+|.++|++... ...++.++|++|++ .+++.+||.|++.+......
T Consensus 284 iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~ 361 (501)
T PRK11288 284 LFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHL 361 (501)
T ss_pred EEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhc
Confidence 999999999999999999876 478999999987532 12346799999996 47889999999987532211
Q ss_pred CCC--CCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHH
Q 000506 971 SSD--IDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1047 (1458)
Q Consensus 971 ~~~--~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~ 1047 (1458)
... ......++.++++++.+++. +..++.++ .|||||||||+||++|+.+|+||||||||+|||+.+...++
T Consensus 362 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~ 436 (501)
T PRK11288 362 RAGCLINNRWEAENADRFIRSLNIKTPSREQLIM-----NLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIY 436 (501)
T ss_pred ccccccChHHHHHHHHHHHHhcCcccCCccCccc-----cCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHH
Confidence 001 11223345688999999994 66777654 79999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCCc
Q 000506 1048 RTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGR 1095 (1458)
Q Consensus 1048 ~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~~ 1095 (1458)
++|++++++|.|||++|||+. ++.+.||++++|++ |++++.|..++
T Consensus 437 ~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 437 NVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred HHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 999999888999999999986 58889999999985 78999887754
No 29
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.2e-62 Score=674.02 Aligned_cols=210 Identities=20% Similarity=0.243 Sum_probs=178.1
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.++
T Consensus 1284 ~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~dI 1350 (1522)
T TIGR00957 1284 RVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLNI 1350 (1522)
T ss_pred cEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEEc
Confidence 6899999999852 11359999999999999999999999999999999999876 4789999999987
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-------LTNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 1004 (1458)
.. ..+|+.++||||++.+++. |+||||.... +.+ ++.++++++..++.+ -.|+.+|..
T Consensus 1351 ~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1418 (1522)
T TIGR00957 1351 AKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG- 1418 (1522)
T ss_pred cccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC-
Confidence 54 4578899999999999975 9999996211 122 234677888887754 346677653
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~- 1494 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK- 1494 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999875 5899999999975 5667999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 1495 G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 GEVAEFGAP 1503 (1522)
T ss_pred CEEEEECCH
Confidence 799999986
No 30
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-62 Score=612.71 Aligned_cols=451 Identities=21% Similarity=0.299 Sum_probs=344.1
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc----cceEEEecCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLHFG 257 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 257 (1458)
++++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 10 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 86 (491)
T PRK10982 10 GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVL 86 (491)
T ss_pred CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccccccc
Confidence 456999999999999999999999999999999999999987 9999999998754321 356999999998899
Q ss_pred CCCHHHHHHHhhh-hccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 258 EMTVRETMDFSGR-CLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 258 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
.+||+||+.++.. ..+... + .. + ....++.+++.+||++..++.+++
T Consensus 87 ~~tv~~~l~~~~~~~~~~~~--~------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 134 (491)
T PRK10982 87 QRSVMDNMWLGRYPTKGMFV--D------QD----------K--------------MYRDTKAIFDELDIDIDPRAKVAT 134 (491)
T ss_pred CCCHHHHhhccccccccccc--C------HH----------H--------------HHHHHHHHHHHcCCCCCccCchhh
Confidence 9999999987532 111000 0 00 0 011245578899999888888877
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. + .+++.++|+.+++.++||+|++|
T Consensus 135 -----LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~-g-~tvii~tH~~~~~~~~~d~i~~l 207 (491)
T PRK10982 135 -----LSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKER-G-CGIVYISHKMEEIFQLCDEITIL 207 (491)
T ss_pred -----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-C-CEEEEEecCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998753 4 45666778889999999999999
Q ss_pred cCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhhHHhhh
Q 000506 417 SEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQLANDL 496 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~l~~~~ 496 (1458)
++|+++..|+++++.. ++..+
T Consensus 208 ~~G~i~~~~~~~~~~~--------------------------------------------~~~~~--------------- 228 (491)
T PRK10982 208 RDGQWIATQPLAGLTM--------------------------------------------DKIIA--------------- 228 (491)
T ss_pred ECCEEEeecChhhCCH--------------------------------------------HHHHH---------------
Confidence 9999998876533100 00000
Q ss_pred cCCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhhH
Q 000506 497 AVPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVADGAKFY 576 (1458)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~ 576 (1458)
+ +.... .
T Consensus 229 --------------------------------~-----------------------------~~~~~-----~------- 235 (491)
T PRK10982 229 --------------------------------M-----------------------------MVGRS-----L------- 235 (491)
T ss_pred --------------------------------H-----------------------------HhCCC-----c-------
Confidence 0 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhHHHHHH
Q 000506 577 GALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAASRLFR 656 (1458)
Q Consensus 577 g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~~~ff~ 656 (1458)
T Consensus 236 -------------------------------------------------------------------------------- 235 (491)
T PRK10982 236 -------------------------------------------------------------------------------- 235 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHHHhhcC
Q 000506 657 QYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVINEFLD 736 (1458)
Q Consensus 657 ~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~ 736 (1458)
. ..+
T Consensus 236 -----------------------------------------------------~---------------------~~~-- 239 (491)
T PRK10982 236 -----------------------------------------------------T---------------------QRF-- 239 (491)
T ss_pred -----------------------------------------------------c---------------------ccc--
Confidence 0 000
Q ss_pred CCCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeeccccccccc
Q 000506 737 ERWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGDKKKKA 816 (1458)
Q Consensus 737 ~~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1458)
. ..
T Consensus 240 ------------------------------------------------------------------------~-~~---- 242 (491)
T PRK10982 240 ------------------------------------------------------------------------P-DK---- 242 (491)
T ss_pred ------------------------------------------------------------------------c-cc----
Confidence 0 00
Q ss_pred CCCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeE
Q 000506 817 SGQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVL 896 (1458)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~ 896 (1458)
. . . + .+..++++|+++.. +.+|+|||+.+++||+
T Consensus 243 ------~----~----------~---~--------~~~~i~~~~l~~~~---------------~~~l~~vsl~i~~Ge~ 276 (491)
T PRK10982 243 ------E----N----------K---P--------GEVILEVRNLTSLR---------------QPSIRDVSFDLHKGEI 276 (491)
T ss_pred ------c----C----------C---C--------CCcEEEEeCccccc---------------CcccceeeEEEeCCcE
Confidence 0 0 0 0 01136777776631 2489999999999999
Q ss_pred EEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc----cccceEEEEccCCC---CCCCCCHHHHHHHHHh--
Q 000506 897 TALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA----TFARVSGYCEQNDI---HSPHVTVYESLLFSAW-- 967 (1458)
Q Consensus 897 ~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~---~~~~lTV~e~l~f~~~-- 967 (1458)
++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.+||++|+.. +++.+|+.++..+...
T Consensus 277 ~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~ 354 (491)
T PRK10982 277 LGIAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRN 354 (491)
T ss_pred EEEecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhh
Confidence 99999999999999999999876 4789999999876432 12456899999853 6788888877433210
Q ss_pred hhcCCC-CCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHH
Q 000506 968 LRLSSD-IDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1045 (1458)
Q Consensus 968 lr~~~~-~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~ 1045 (1458)
...... ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||+|||||+|||+.++..
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~ 429 (491)
T PRK10982 355 YKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQI-----GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFE 429 (491)
T ss_pred hcccccccCcHHHHHHHHHHHHhcCccCCCccccc-----ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHH
Confidence 000001 12233345678899999995 4556654 4799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1046 VMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1046 i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
+++.|+++.++|+|||++||+++ ++.+.||++++|++ |+++..++.+
T Consensus 430 ~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 430 IYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred HHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 99999999888999999999986 57789999999986 7888766553
No 31
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.2e-60 Score=652.14 Aligned_cols=210 Identities=23% Similarity=0.267 Sum_probs=178.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++|+||+++|+. +...+|+|||++|+|||.+||+|+||||||||+++|.|..+ +.+|+|.+||+++
T Consensus 1308 ~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~di 1374 (1560)
T PTZ00243 1308 SLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGREI 1374 (1560)
T ss_pred eEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEc
Confidence 6999999999842 12359999999999999999999999999999999999887 4789999999987
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL-------TNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 1004 (1458)
.. ..+++.+|||||++.++.. ||+|||... .+.+ ++.++++++..++.+. .|+.+|..
T Consensus 1375 ~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~- 1442 (1560)
T PTZ00243 1375 GAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG- 1442 (1560)
T ss_pred ccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC-
Confidence 54 4678899999999999865 999999531 1222 3457888888888653 46777753
Q ss_pred CCCCCHHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEec
Q 000506 1005 VDGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1083 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~-p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~ 1083 (1458)
..+||||||||++|||||+++ |+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1443 G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd~ 1519 (1560)
T PTZ00243 1443 GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMDH 1519 (1560)
T ss_pred cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEEC
Confidence 357999999999999999996 89999999999999999999999999864 4799999999974 5678999999985
Q ss_pred CcEEEEeCCC
Q 000506 1084 GGQVIYAGPL 1093 (1458)
Q Consensus 1084 gG~~~~~G~~ 1093 (1458)
|+++..|+.
T Consensus 1520 -G~VvE~Gt~ 1528 (1560)
T PTZ00243 1520 -GAVAEMGSP 1528 (1560)
T ss_pred -CEEEEECCH
Confidence 799999985
No 32
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.2e-60 Score=654.71 Aligned_cols=209 Identities=21% Similarity=0.264 Sum_probs=177.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++|+||++.|+. +...+|+|||++|+|||.+||+|+||||||||+++|+|... .+|+|.|||.++
T Consensus 1217 ~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~di 1282 (1490)
T TIGR01271 1217 QMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVSW 1282 (1490)
T ss_pred eEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEc
Confidence 6899999999852 12469999999999999999999999999999999999874 589999999987
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-------LTNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 1004 (1458)
.. ..+|+.++||||++.+++. ||||||.... .. .++.++++++.++|.+ -.|+.+|..
T Consensus 1283 ~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~----tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~- 1350 (1490)
T TIGR01271 1283 NSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QW----SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG- 1350 (1490)
T ss_pred ccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CC----CHHHHHHHHHHCCCHHHHHhCccccccccccC-
Confidence 54 4577899999999999975 9999995321 11 2345788899888854 346677643
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..+||||||||++|||||+++|+||+||||||+||..+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1351 G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~- 1426 (1490)
T TIGR01271 1351 GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG- 1426 (1490)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999875 4799999999975 5567999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|+++..|++
T Consensus 1427 G~ivE~g~p 1435 (1490)
T TIGR01271 1427 SSVKQYDSI 1435 (1490)
T ss_pred CEEEEeCCH
Confidence 799998875
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.1e-61 Score=601.46 Aligned_cols=447 Identities=19% Similarity=0.273 Sum_probs=331.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCCC--C-
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDLH--F- 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~--~- 256 (1458)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.. +
T Consensus 16 ~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (490)
T PRK10938 16 TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLS 92 (490)
T ss_pred eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhcc
Confidence 45999999999999999999999999999999999999987 999999997764322 13459999998542 1
Q ss_pred -----CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccc
Q 000506 257 -----GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICAD 331 (1458)
Q Consensus 257 -----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d 331 (1458)
..+||+|++.+.. + ....++.+++.+||++..|
T Consensus 93 ~~~~~~~~~~~~~~~~~~-------------~-----------------------------~~~~~~~~l~~~~l~~~~~ 130 (490)
T PRK10938 93 PGEDDTGRTTAEIIQDEV-------------K-----------------------------DPARCEQLAQQFGITALLD 130 (490)
T ss_pred cchhhccccHHHhcccch-------------h-----------------------------HHHHHHHHHHHcCCHhhhh
Confidence 1457777764310 0 0012345789999998888
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
..+++ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. + ++|+.++|+.+++.+++|
T Consensus 131 ~~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-g-~tvii~tH~~~~~~~~~d 203 (490)
T PRK10938 131 RRFKY-----LSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQS-G-ITLVLVLNRFDEIPDFVQ 203 (490)
T ss_pred CCccc-----CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhc-C-CeEEEEeCCHHHHHhhCC
Confidence 88887 9999999999999999999999999999999999999999999999763 4 455667788899999999
Q ss_pred EEEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhh
Q 000506 412 NIILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQ 491 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~ 491 (1458)
+|++|++|+++.+|+++++.+ . +.+..+.
T Consensus 204 ~v~~l~~G~i~~~~~~~~~~~-----------~----~~~~~~~------------------------------------ 232 (490)
T PRK10938 204 FAGVLADCTLAETGEREEILQ-----------Q----ALVAQLA------------------------------------ 232 (490)
T ss_pred EEEEEECCEEEEeCCHHHHhc-----------c----hhhhhhh------------------------------------
Confidence 999999999999988765421 0 0000000
Q ss_pred HHhhhcCCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCcccc
Q 000506 492 LANDLAVPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVAD 571 (1458)
Q Consensus 492 l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~ 571 (1458)
.+ ....
T Consensus 233 ------------------------------------~~-------------------------------------~~~~- 238 (490)
T PRK10938 233 ------------------------------------HS-------------------------------------EQLE- 238 (490)
T ss_pred ------------------------------------hh-------------------------------------hccC-
Confidence 00 0000
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhH
Q 000506 572 GAKFYGALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAA 651 (1458)
Q Consensus 572 ~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~ 651 (1458)
T Consensus 239 -------------------------------------------------------------------------------- 238 (490)
T PRK10938 239 -------------------------------------------------------------------------------- 238 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHH
Q 000506 652 SRLFRQYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVI 731 (1458)
Q Consensus 652 ~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 731 (1458)
T Consensus 239 -------------------------------------------------------------------------------- 238 (490)
T PRK10938 239 -------------------------------------------------------------------------------- 238 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcCCCCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeecccc
Q 000506 732 NEFLDERWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGD 811 (1458)
Q Consensus 732 nef~~~~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~ 811 (1458)
.. . .+. .
T Consensus 239 ----~~--~--~~~-----------------------------------------------------------------~ 245 (490)
T PRK10938 239 ----GV--Q--LPE-----------------------------------------------------------------P 245 (490)
T ss_pred ----cc--c--cCc-----------------------------------------------------------------c
Confidence 00 0 000 0
Q ss_pred cccccCCCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEE
Q 000506 812 KKKKASGQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVF 891 (1458)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i 891 (1458)
... .... . . + . ....++++|+++.++ ++.+|+|+|+++
T Consensus 246 ~~~-------------~~~~----~--~---~-~------~~~~l~~~~l~~~~~-------------~~~il~~vsl~i 283 (490)
T PRK10938 246 DEP-------------SARH----A--L---P-A------NEPRIVLNNGVVSYN-------------DRPILHNLSWQV 283 (490)
T ss_pred ccc-------------cccc----c--c---C-C------CCceEEEeceEEEEC-------------CeeEEeeceEEE
Confidence 000 0000 0 0 0 0 011478888887763 245899999999
Q ss_pred eCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc----ccccceEEEEccCCCCCC--CCCHHHHHHHH
Q 000506 892 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ----ATFARVSGYCEQNDIHSP--HVTVYESLLFS 965 (1458)
Q Consensus 892 ~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~--~lTV~e~l~f~ 965 (1458)
++||+++|+||||||||||+++|+|..++ ..+|+|.++|.+... ...++.+||++|++.++. ..|+++++.+.
T Consensus 284 ~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~ 362 (490)
T PRK10938 284 NPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSG 362 (490)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhc
Confidence 99999999999999999999999997531 258999999976421 123467999999876543 35777766543
Q ss_pred Hhh--hcCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Q 000506 966 AWL--RLSSDIDSKTRKMFVDEVMDLVELEP-LTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1042 (1458)
Q Consensus 966 ~~l--r~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~ 1042 (1458)
... ....... ++.++.++++++.++|.+ ..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.+
T Consensus 363 ~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~ 436 (490)
T PRK10938 363 FFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLN 436 (490)
T ss_pred cccccccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHH
Confidence 211 1111111 223456889999999987 677665 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCC-CEEEEEecCccHHHHH-hhceEEEEecCcEEEEe
Q 000506 1043 AAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFE-AFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1043 ~~~i~~~l~~~~~~g-~tvi~t~Hq~s~~i~~-~~D~vlll~~gG~~~~~ 1090 (1458)
+..+++.|++++++| .|||+++|+++ ++.+ .+|++++|++ |++++.
T Consensus 437 ~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 437 RQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 999999999998776 47999999986 4655 5899999986 565554
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=8.9e-59 Score=518.06 Aligned_cols=470 Identities=23% Similarity=0.323 Sum_probs=365.9
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcccEEEECCeecCCcccc-------ceEEEecC
Q 000506 181 RKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDD--DLKLTGKIKYCGHEFKEFVPQ-------RTCAYISQ 251 (1458)
Q Consensus 181 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~--~~~~~G~I~~~G~~~~~~~~~-------~~~~yv~Q 251 (1458)
+...++++|||.+++||.++|+|.||||||-..+.+.|+++. ....+|+|.|+|+++-....+ ..|++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 456799999999999999999999999999999999999976 335589999999987554321 46999999
Q ss_pred CC--CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccc
Q 000506 252 ND--LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDIC 329 (1458)
Q Consensus 252 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~ 329 (1458)
+| .+.|-.|+..-+.-..++... +++++ .+.++-.+|+..|+.+-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------~~~~~------------------------Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------LSRAA------------------------ARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------ccHHH------------------------HHHHHHHHHHHcCCCch
Confidence 97 477777888877665554311 11111 12234457888888765
Q ss_pred ccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhc
Q 000506 330 ADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDL 409 (1458)
Q Consensus 330 ~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~ 409 (1458)
...+ +.+...|||||||||.||.||+++|++|+-||||++||.....+|.+.|+++.++.+ ..++.|+|+..-+-++
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~g-Ma~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELG-MAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhC-cEEEEEeccHHHHHHh
Confidence 4333 445666999999999999999999999999999999999999999999999988764 6777789999999999
Q ss_pred cCEEEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhh
Q 000506 410 FDNIILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVG 489 (1458)
Q Consensus 410 ~D~v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~ 489 (1458)
+|||+||.+|+++++|+++.+.. .|. .||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~Pq-------------------------HpYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQ-------------------------HPYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCC-------------------------ChHH-----------------
Confidence 99999999999999999877632 111 0100
Q ss_pred hhHHhhhcCCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCcc
Q 000506 490 QQLANDLAVPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNV 569 (1458)
Q Consensus 490 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~ 569 (1458)
+.+.+.
T Consensus 255 r~Ll~a-------------------------------------------------------------------------- 260 (534)
T COG4172 255 RKLLAA-------------------------------------------------------------------------- 260 (534)
T ss_pred HHHHhc--------------------------------------------------------------------------
Confidence 000000
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcch
Q 000506 570 ADGAKFYGALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAP 649 (1458)
Q Consensus 570 ~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~ 649 (1458)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHH
Q 000506 650 AASRLFRQYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAI 729 (1458)
Q Consensus 650 ~~~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al 729 (1458)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcCCCCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeecc
Q 000506 730 VINEFLDERWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEED 809 (1458)
Q Consensus 730 ~~nef~~~~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~ 809 (1458)
.|..
T Consensus 261 -------------eP~g--------------------------------------------------------------- 264 (534)
T COG4172 261 -------------EPSG--------------------------------------------------------------- 264 (534)
T ss_pred -------------CCCC---------------------------------------------------------------
Confidence 0000
Q ss_pred cccccccCCCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceeccccee
Q 000506 810 GDKKKKASGQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSG 889 (1458)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 889 (1458)
. ..+ ..+..+..++.+|+...++.+..+-. ...+...++++||+
T Consensus 265 -~----------------~~p-----------------~~~~~~~ll~~~~v~v~f~i~~g~~~--r~~~~~~AVd~isl 308 (534)
T COG4172 265 -D----------------PPP-----------------LPEDAPVLLEVEDLRVWFPIKGGFLR--RTVDHLRAVDGISL 308 (534)
T ss_pred -C----------------CCC-----------------CCCCCCceEEecceEEEEecCCcccc--ccchheEEecccee
Confidence 0 000 00001224555565555544322111 01234578999999
Q ss_pred EEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc------ccccceEEEEccCCC--CCCCCCHHHH
Q 000506 890 VFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ------ATFARVSGYCEQNDI--HSPHVTVYES 961 (1458)
Q Consensus 890 ~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~--~~~~lTV~e~ 961 (1458)
+.++||.+||+|.||||||||=.+|.++.. .+|+|.++|+++.. ..+++.+-.|+|||. +.|.+||.|-
T Consensus 309 ~L~~gqTlGlVGESGSGKsTlG~allrL~~---s~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qI 385 (534)
T COG4172 309 TLRRGQTLGLVGESGSGKSTLGLALLRLIP---SQGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQI 385 (534)
T ss_pred EecCCCeEEEEecCCCCcchHHHHHHhhcC---cCceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHH
Confidence 999999999999999999999999999886 35999999998753 246678999999985 7799999999
Q ss_pred HHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000506 962 LLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL-TNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1040 (1458)
Q Consensus 962 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1040 (1458)
+.-+.....+ ..+..++++++.++|+++||.+- ++++ +.++|||||||++|||||+.+|++++||||||.||-
T Consensus 386 I~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~ 459 (534)
T COG4172 386 IEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILLDEPTSALDR 459 (534)
T ss_pred hhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhH
Confidence 9887665543 46788999999999999999863 3443 568999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1041 RAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1041 ~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
.-+.+|+++|+++.++ |.+-++++||.. -+-.+||+|+||++ |++++.||.
T Consensus 460 SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 460 SVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 9999999999999754 999999999986 47789999999985 899999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.8e-58 Score=582.91 Aligned_cols=201 Identities=22% Similarity=0.313 Sum_probs=165.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. ++.+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.+++.
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET-- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 488999988763 2469999999999999999999999999999999999876 47899999542
Q ss_pred CcccccceEEEEccCC-CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHH
Q 000506 935 NQATFARVSGYCEQND-IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-LTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~-~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 1012 (1458)
..+||++|++ .+++.+||+|++.+....+. .... ...++++++.+++.+ ..+..+ ..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1589999996 67789999999988643221 1111 123457899999964 456554 4799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEE-EeC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI-YAG 1091 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~-~~G 1091 (1458)
||||+||++|+.+|++|+|||||+|||+.+...+++.|+++. | |||++||++. .+.+.||++++|++||++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999873 4 8999999986 5778899999998667765 555
Q ss_pred C
Q 000506 1092 P 1092 (1458)
Q Consensus 1092 ~ 1092 (1458)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-58 Score=581.11 Aligned_cols=198 Identities=18% Similarity=0.294 Sum_probs=165.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 588999988763 2458999999999999999999999999999999999876 47899999873
Q ss_pred CcccccceEEEEccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHH
Q 000506 935 NQATFARVSGYCEQNDI--HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~--~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgG 1011 (1458)
+.+||++|++. +.+.+||+|++.+.. .. . ..++.++++++.+++. +..+..+ ..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCcc-----cccCHH
Confidence 46899999864 456799999986421 11 1 1134578899999994 5666664 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEE-Ee
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI-YA 1090 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~-~~ 1090 (1458)
||||++||++|+.+|++|+|||||+|||+.+...+++.|+++ +.|||++||++. .+.+.||++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999987 459999999986 57788999999986 5665 77
Q ss_pred CCC
Q 000506 1091 GPL 1093 (1458)
Q Consensus 1091 G~~ 1093 (1458)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=4.5e-58 Score=579.38 Aligned_cols=201 Identities=20% Similarity=0.294 Sum_probs=165.2
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--
Confidence 478899988763 2469999999999999999999999999999999999876 47899999542
Q ss_pred CcccccceEEEEccCC-CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHH
Q 000506 935 NQATFARVSGYCEQND-IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-LTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~-~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 1012 (1458)
..+||++|+. .+++.+||.|++.+...... .... +..++++++.+++.+ ..+..+ ..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1589999986 47788999999988643211 1111 123567899999964 456554 4799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEE-EeC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI-YAG 1091 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~-~~G 1091 (1458)
||||+||++|+.+|++|+|||||+|||+.+...+++.|+++. .|||++||++. .+.+.||++++|++||++. +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999873 48999999986 5777899999998666766 555
Q ss_pred C
Q 000506 1092 P 1092 (1458)
Q Consensus 1092 ~ 1092 (1458)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-55 Score=559.92 Aligned_cols=197 Identities=22% Similarity=0.334 Sum_probs=162.2
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 478999988763 2469999999999999999999999999999999999876 47899999742
Q ss_pred CcccccceEEEEccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHH
Q 000506 935 NQATFARVSGYCEQND--IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-LTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~--~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgG 1011 (1458)
..+||++|+. .+.+..|+.+++.- . . .......+.++++.+++.. ..++.++ .||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~----~~~~~~~~~~~L~~~~l~~~~~~~~~~-----~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--A----PQELEQKLRDYLGGFGFQGDKVTEETR-----RFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--C----chhhHHHHHHHHHHcCCChhHhcCchh-----hCCHH
Confidence 2589999974 34456677776531 1 1 1122346789999999963 5666654 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEE-Ee
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI-YA 1090 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~-~~ 1090 (1458)
|||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++ . .|||++|||+. .+...||++++|.+ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999986 57788999999986 6775 78
Q ss_pred CCC
Q 000506 1091 GPL 1093 (1458)
Q Consensus 1091 G~~ 1093 (1458)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 39
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=4e-56 Score=558.73 Aligned_cols=213 Identities=22% Similarity=0.279 Sum_probs=175.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ + ..|+++|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 478888887652 1 24899999999999999999999999999999999876 478999885
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 935 NQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..++.++ .|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~~-----~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNVK-----DLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCcc-----cCCHHHHH
Confidence 1489999998888899999999875211 111 1246889999999887777654 79999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++||+. .+...+|++++|+ | ++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999765 899999999986 5777899999996 4 66666664
Q ss_pred Ccc---hHHHHHHHHhCCCC
Q 000506 1094 GRQ---SQKLVEYFEAVPGV 1110 (1458)
Q Consensus 1094 ~~~---~~~~~~~f~~~~g~ 1110 (1458)
... .+.+..|++.+ ++
T Consensus 538 ~~~~~~~~~~~~~l~~~-~i 556 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL-GI 556 (590)
T ss_pred CCchhHHHHHHHHHHHc-CC
Confidence 322 24456777777 54
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.1e-55 Score=562.16 Aligned_cols=202 Identities=25% Similarity=0.339 Sum_probs=165.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++|+++.++ ++.+|+|+|++|++|+++||+|||||||||||++|+|..+ +.+|+|.+ |.+
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~- 381 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTK- 381 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCC-
Confidence 478999988763 2469999999999999999999999999999999999876 47899998 432
Q ss_pred CcccccceEEEEccCC-CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHH
Q 000506 935 NQATFARVSGYCEQND-IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~-~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGq 1012 (1458)
-.+||++|+. .+++.+||.|++.+.... . ... .....+.++++.+++. +..++.++ .|||||
T Consensus 382 ------~~i~y~~q~~~~l~~~~tv~e~l~~~~~~-~--~~~--~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGe 445 (635)
T PRK11147 382 ------LEVAYFDQHRAELDPEKTVMDNLAEGKQE-V--MVN--GRPRHVLGYLQDFLFHPKRAMTPVK-----ALSGGE 445 (635)
T ss_pred ------cEEEEEeCcccccCCCCCHHHHHHhhccc-c--ccc--chHHHHHHHHHhcCCCHHHHhChhh-----hCCHHH
Confidence 1589999985 578899999999875321 0 111 1133578889999986 45566554 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe-cCcEEEEeC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK-RGGQVIYAG 1091 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~-~gG~~~~~G 1091 (1458)
||||+||++|+.+|++|||||||+|||..+...+.+.|+++ +.|||++||+.. .+...||++++|. +|....|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999886 459999999975 5778899999997 555556666
Q ss_pred CC
Q 000506 1092 PL 1093 (1458)
Q Consensus 1092 ~~ 1093 (1458)
..
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 54
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-54 Score=515.35 Aligned_cols=455 Identities=24% Similarity=0.376 Sum_probs=355.1
Q ss_pred cccccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcccc----ceEEEe
Q 000506 174 RILPSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQ----RTCAYI 249 (1458)
Q Consensus 174 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv 249 (1458)
++..++.+..++|+|||+.+++||+++|+|.||||||||+|+|+|.++|+ +|+|.++|++.....++ .-|+.|
T Consensus 12 ~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V 88 (500)
T COG1129 12 RGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATV 88 (500)
T ss_pred ecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEE
Confidence 34456667789999999999999999999999999999999999999998 99999999988755543 459999
Q ss_pred cCCCCCCCCCCHHHHHHHhhhhccC-CchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc
Q 000506 250 SQNDLHFGEMTVRETMDFSGRCLGV-GTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI 328 (1458)
Q Consensus 250 ~Q~d~~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~ 328 (1458)
.|+..++|+|||.||+.++...... +- +.++ ........+|+.+|+..
T Consensus 89 ~QEl~L~p~LsVaeNifLgre~~~~~g~-------id~~------------------------~m~~~A~~~l~~lg~~~ 137 (500)
T COG1129 89 HQELSLVPNLSVAENIFLGREPTRRFGL-------IDRK------------------------AMRRRARELLARLGLDI 137 (500)
T ss_pred eechhccCCccHHHHhhcccccccCCCc-------cCHH------------------------HHHHHHHHHHHHcCCCC
Confidence 9999999999999999765432210 00 0000 01123455899999976
Q ss_pred cccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHh
Q 000506 329 CADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYD 408 (1458)
Q Consensus 329 ~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~ 408 (1458)
..++.|++ ||+||||-|.||+||..++++++|||||+.|+...+.++.+.++++.. ++..++.++|..+|+++
T Consensus 138 ~~~~~v~~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~ 210 (500)
T COG1129 138 DPDTLVGD-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFE 210 (500)
T ss_pred Chhhhhhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHH
Confidence 68999998 999999999999999999999999999999999999999999999976 45777888999999999
Q ss_pred ccCEEEEEcCCeEEEEcCh-hhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcch
Q 000506 409 LFDNIILLSEGQIVYQGPR-EKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFH 487 (1458)
Q Consensus 409 ~~D~v~lL~~G~iv~~G~~-~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~ 487 (1458)
+||||.||.||+++..++. .+.- .++..+
T Consensus 211 i~DritVlRDG~~v~~~~~~~~~~--------------------------------------------~~~lv~------ 240 (500)
T COG1129 211 IADRITVLRDGRVVGTRPTAAETS--------------------------------------------EDELVR------ 240 (500)
T ss_pred hcCEEEEEeCCEEeeecccccCCC--------------------------------------------HHHHHH------
Confidence 9999999999999877763 2210 000000
Q ss_pred hhhhHHhhhcCCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 000506 488 VGQQLANDLAVPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVG 567 (1458)
Q Consensus 488 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~ 567 (1458)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCc
Q 000506 568 NVADGAKFYGALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGF 647 (1458)
Q Consensus 568 ~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~ 647 (1458)
.|+|=
T Consensus 241 ---------------------------------------------------------------------------~MvGr 245 (500)
T COG1129 241 ---------------------------------------------------------------------------LMVGR 245 (500)
T ss_pred ---------------------------------------------------------------------------HhhCc
Confidence 00000
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHH
Q 000506 648 APAASRLFRQYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQN 727 (1458)
Q Consensus 648 ~~~~~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~ 727 (1458)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcCCCCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceee
Q 000506 728 AIVINEFLDERWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIE 807 (1458)
Q Consensus 728 al~~nef~~~~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~ 807 (1458)
++. ..|.
T Consensus 246 -----~~~-~~~~------------------------------------------------------------------- 252 (500)
T COG1129 246 -----ELE-DLFP------------------------------------------------------------------- 252 (500)
T ss_pred -----chh-hhcc-------------------------------------------------------------------
Confidence 000 0000
Q ss_pred cccccccccCCCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccc
Q 000506 808 EDGDKKKKASGQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDV 887 (1458)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~v 887 (1458)
. . . . + ...+..+++++++.. ..++|+
T Consensus 253 ---~--~----------------~----~------~------~~~~~~l~v~~l~~~-----------------~~~~dv 278 (500)
T COG1129 253 ---E--P----------------P----E------E------GIGEPVLEVRNLSGG-----------------GKVRDV 278 (500)
T ss_pred ---c--c----------------c----c------c------CCCCcEEEEecCCCC-----------------CceeCc
Confidence 0 0 0 0 0 000123555555421 147899
Q ss_pred eeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc----cccceEEEEccCC---CCCCCCCHHH
Q 000506 888 SGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA----TFARVSGYCEQND---IHSPHVTVYE 960 (1458)
Q Consensus 888 s~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTV~e 960 (1458)
||++++||+++|-|--|||+|-|+++|.|..+ ..+|+|.+||++.... ..+..++|||.|. -++..++|++
T Consensus 279 Sf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~ 356 (500)
T COG1129 279 SFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAE 356 (500)
T ss_pred eeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHH
Confidence 99999999999999999999999999999654 4689999999986432 3456799999885 4778999999
Q ss_pred HHHHHHhhhcC-C-CCCHHHHHHHHHHHHHHcCCCccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000506 961 SLLFSAWLRLS-S-DIDSKTRKMFVDEVMDLVELEPLT-NAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1037 (1458)
Q Consensus 961 ~l~f~~~lr~~-~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1037 (1458)
|+.++...+.. . -++....++.+++..+.+++.... +.. +..||||.+|||.|||.|..+|++|+|||||.|
T Consensus 357 Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRG 431 (500)
T COG1129 357 NITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRG 431 (500)
T ss_pred heehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcC
Confidence 99887332222 1 245555567789999999986432 344 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1038 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1038 LD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
+|..+..+|.+++++++++|++||+++-+.. |+..+||||+||.+ |+++-.
T Consensus 432 IDVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e 482 (500)
T COG1129 432 IDVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGE 482 (500)
T ss_pred cccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999975 89999999999985 677653
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1e-51 Score=527.11 Aligned_cols=200 Identities=18% Similarity=0.268 Sum_probs=159.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ +++.+|+|+|++|++|++++|+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 488999998773 12358999999999999999999999999999999999876 47899998752
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHH
Q 000506 935 NQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-LTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqr 1013 (1458)
..+||++|+.. ..+++.++..+......+ ... ++.++++++.+++.+ ..+..+ ..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~~-----~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQPM-----YTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCCc-----cccCHHHH
Confidence 35899999753 445666654332111111 111 245788999999974 455543 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEE-EeCC
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI-YAGP 1092 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~-~~G~ 1092 (1458)
|||+||++|+.+|++|+|||||+|||+.+...+++.|++. . .|||++||++. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999999888765 3 49999999986 57778999999985 6776 7776
Q ss_pred C
Q 000506 1093 L 1093 (1458)
Q Consensus 1093 ~ 1093 (1458)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=9e-52 Score=505.19 Aligned_cols=223 Identities=26% Similarity=0.304 Sum_probs=174.3
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCC
Q 000506 179 KKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGE 258 (1458)
Q Consensus 179 ~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 258 (1458)
..+.+++|+|+|+.+.+|+.++|+|+||||||||||+|+|...|+ +|+|...+ .-+++|++|++...+.
T Consensus 12 ~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~ 80 (530)
T COG0488 12 AYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPE 80 (530)
T ss_pred eeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCC
Confidence 345678999999999999999999999999999999999999998 99998764 2369999999999989
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCCh---hHHHHHHHH-HHhhhchhhHHHHHHHHcCCcccccccc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDP---EIDAYMKAT-ALAGQKTSLATDYVLKLLGLDICADTMV 334 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~---~~~~~~~~~-~~~~~~~~~~~~~il~~lgL~~~~dt~v 334 (1458)
.||.+.+.-+.. ...+...++...... .+++ .++.+.... .+.+...+..+..++..||+... ++.+
T Consensus 81 ~tv~~~v~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~ 151 (530)
T COG0488 81 KTVLDYVIEGFG-----ELRELLAELEEAYAL---LADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPV 151 (530)
T ss_pred ccHHHHHHhhhH-----HHHHHHHHHHHHHHh---cccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCch
Confidence 999999976543 112222222221111 1111 111111111 12233445667788999999887 8888
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEE
Q 000506 335 GDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNII 414 (1458)
Q Consensus 335 g~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~ 414 (1458)
++ ||||||.||+||++|+.+|++|+|||||++||..+..++.+.|++. .+ +++.++|+....-+.|++|+
T Consensus 152 ~~-----LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~ 221 (530)
T COG0488 152 SS-----LSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHIL 221 (530)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheE
Confidence 88 9999999999999999999999999999999999999999999864 23 66778899999999999999
Q ss_pred EEcCCeE-EEEcChhhHH
Q 000506 415 LLSEGQI-VYQGPREKVL 431 (1458)
Q Consensus 415 lL~~G~i-v~~G~~~~~~ 431 (1458)
-++.|++ .|.|.++...
T Consensus 222 ~ld~g~l~~y~Gny~~~~ 239 (530)
T COG0488 222 ELDRGKLTPYKGNYSSYL 239 (530)
T ss_pred EecCCceeEecCCHHHHH
Confidence 9999987 6788876654
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.4e-50 Score=468.92 Aligned_cols=462 Identities=21% Similarity=0.314 Sum_probs=360.5
Q ss_pred ccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcccc----ceEEEecCC
Q 000506 177 PSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQ----RTCAYISQN 252 (1458)
Q Consensus 177 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~ 252 (1458)
.+..+...+++|||++|++||+.+|+|.||||||||+++|.|.++|+ +|+|.++|+++.-..++ --||+|.||
T Consensus 11 tK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQH 87 (501)
T COG3845 11 TKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQH 87 (501)
T ss_pred EEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeec
Confidence 34455778999999999999999999999999999999999999999 99999999998755543 459999999
Q ss_pred CCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccc
Q 000506 253 DLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADT 332 (1458)
Q Consensus 253 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 332 (1458)
..+++++||.||+..+..-... .+ +.++ +....++.+.+.+||+-..|.
T Consensus 88 F~Lv~~lTV~ENiiLg~e~~~~-~~------~~~~------------------------~~~~~i~~l~~~yGl~vdp~~ 136 (501)
T COG3845 88 FMLVPTLTVAENIILGLEPSKG-GL------IDRR------------------------QARARIKELSERYGLPVDPDA 136 (501)
T ss_pred cccccccchhhhhhhcCccccc-cc------cCHH------------------------HHHHHHHHHHHHhCCCCCccc
Confidence 9999999999999987542100 00 0000 012235668899999999999
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
+|++ ||=||||||.|-++|+.+|++|+|||||+-|-|....++++.|+++++. +.+|+.++|-..|+.+++||
T Consensus 137 ~V~d-----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~--G~tIi~ITHKL~Ev~~iaDr 209 (501)
T COG3845 137 KVAD-----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAE--GKTIIFITHKLKEVMAIADR 209 (501)
T ss_pred eeec-----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeccHHHHHHhhCe
Confidence 9999 9999999999999999999999999999999999999999999999873 45666788999999999999
Q ss_pred EEEEcCCeEEEEcCh-hhHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhhccCCCCccCCHHHHHHhhhcchhhhh
Q 000506 413 IILLSEGQIVYQGPR-EKVLEFFEYMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKDQPYRYISVSDFVQGFSSFHVGQQ 491 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~-~~~~~~F~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~s~~~~~ 491 (1458)
+.||..|+++-.-++ .+ .+.++.++
T Consensus 210 vTVLR~Gkvvgt~~~~~~--------------------------------------------~t~~ela~---------- 235 (501)
T COG3845 210 VTVLRRGKVVGTVDPVAE--------------------------------------------TTEEELAE---------- 235 (501)
T ss_pred eEEEeCCeEEeeecCCCC--------------------------------------------CCHHHHHH----------
Confidence 999999998643321 00 00000000
Q ss_pred HHhhhcCCcCCcCCCccccccCCCCcchHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhccCCCCCcccc
Q 000506 492 LANDLAVPYDKSRTHPAALVKNKYGISNMDLFRACFGREWLLMKRNSFVYIFKTSQITIMSLIALTVFFRTEMPVGNVAD 571 (1458)
Q Consensus 492 l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~ 571 (1458)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T COG3845 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCcccChhhHHHHHHHHHhhHHHHHHHHHHHHHHHhcCcchhH
Q 000506 572 GAKFYGALFFSLINLMFNGLAELAFTVFRLPVFFKQRDHLFYPPWAYALPIFVLRIPLSILESAIWVCLTYYTIGFAPAA 651 (1458)
Q Consensus 572 ~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~ip~~i~~~~i~~~i~Y~~~g~~~~~ 651 (1458)
.|+|
T Consensus 236 -----------------------------------------------------------------------lMvG----- 239 (501)
T COG3845 236 -----------------------------------------------------------------------LMVG----- 239 (501)
T ss_pred -----------------------------------------------------------------------HhcC-----
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhheeccCCCchhHHHHHHHHcHHHHHHHHHHH
Q 000506 652 SRLFRQYLAFFAVNSMALSLFRFIGSIGRTEVVANTLGTFTLLLVFVLGGFVIAKDDIEPFMIWGYYVSPMMYGQNAIVI 731 (1458)
Q Consensus 652 ~~ff~~~l~~~~~~~~~~~l~r~i~~~~~~~~va~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 731 (1458)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcCCCCCCCCCCCCCcccchhhhhhhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCceeecccc
Q 000506 732 NEFLDERWSKPVSDPKIHEPTVGKLLLKSRGFFTVNYWYWICIGALFGFTILFNILFIAAIQFLNPLGKAKPTVIEEDGD 811 (1458)
Q Consensus 732 nef~~~~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~g~~i~f~~l~~~~l~~~~~~~~~~~~~~~~~~~ 811 (1458)
..+. . .
T Consensus 240 -----------------------~~v~-----------------------------------------------~----~ 245 (501)
T COG3845 240 -----------------------REVV-----------------------------------------------L----R 245 (501)
T ss_pred -----------------------Cccc-----------------------------------------------c----c
Confidence 0000 0 0
Q ss_pred cccccCCCCCCCCCcccccccCCCCCCCCCCCCCCcccCCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEE
Q 000506 812 KKKKASGQPGTEDTDMSVRSSSENVGTTGHGPKKGMVLPFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVF 891 (1458)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i 891 (1458)
..+ .+ ...| +..++++|++..-.. ....+++|||+|
T Consensus 246 ~~~---------------------~~-----~~pg------~~vL~V~~L~v~~~~------------~~~~v~~vs~~V 281 (501)
T COG3845 246 VVK---------------------PP-----STPG------EVVLEVEDLSVKDRR------------GVTAVKDVSFEV 281 (501)
T ss_pred ccc---------------------CC-----CCCC------CeEEEEeeeEeecCC------------CCceeeeeeeEE
Confidence 000 00 0001 235778887754321 245799999999
Q ss_pred eCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC----Ccc-cccceEEEEccCCC---CCCCCCHHHHHH
Q 000506 892 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK----NQA-TFARVSGYCEQNDI---HSPHVTVYESLL 963 (1458)
Q Consensus 892 ~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~----~~~-~~~~~~gyv~Q~~~---~~~~lTV~e~l~ 963 (1458)
++||++||.|..|-|-+.|+.+|+|..++ .+|+|.++|++. +.. ..+..+||||.|.. +.+.+|+.||+.
T Consensus 282 r~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~v 359 (501)
T COG3845 282 RAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLV 359 (501)
T ss_pred ecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhh
Confidence 99999999999999999999999998753 459999999986 222 23356899999874 568999999998
Q ss_pred HHHhhhc----CCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000506 964 FSAWLRL----SSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1039 (1458)
Q Consensus 964 f~~~lr~----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1039 (1458)
+...-+. ..-.+..+..+.+.++++.++....... ...+.||||++||+-+||+|..+|++|+..+||.|||
T Consensus 360 L~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLD 435 (501)
T COG3845 360 LGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDLLIAAQPTRGLD 435 (501)
T ss_pred hhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCEEEEcCCCcccc
Confidence 7654221 1124556777889999999998733211 1245899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCCc
Q 000506 1040 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGR 1095 (1458)
Q Consensus 1040 ~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~~ 1095 (1458)
..+...|.+.|.+.++.|++|++++-+.+ |+++.+||+.+|.+ |+++...+..+
T Consensus 436 vgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~~ 489 (501)
T COG3845 436 VGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPEE 489 (501)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceeccccccc
Confidence 99999999999999999999999999987 89999999999985 78888777653
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-45 Score=382.22 Aligned_cols=214 Identities=25% Similarity=0.404 Sum_probs=191.1
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|++.++ +..++|+|||++|++||+++|+|||||||||||++|.++.. +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 6778887766 35789999999999999999999999999999999999987 58999999997653
Q ss_pred ----cccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 936 ----QATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 936 ----~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
....|+.+|+|+|+.++||++||.||+.++... -...++++.++.+.++|+.+||.+.+|.+. .+||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~--v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVK--VKKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHH--HcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcH
Confidence 235678999999999999999999999987532 234567778888999999999999999885 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
|||||+|||||+.+|+++++|||||+|||+...++.+.+++++++|.|.||+||++.. ..+.+|||+.|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999874 6788999999985 7888888
Q ss_pred CC
Q 000506 1092 PL 1093 (1458)
Q Consensus 1092 ~~ 1093 (1458)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 75
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-44 Score=376.16 Aligned_cols=227 Identities=26% Similarity=0.403 Sum_probs=192.3
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc----cccceEEEecC
Q 000506 176 LPSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF----VPQRTCAYISQ 251 (1458)
Q Consensus 176 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~----~~~~~~~yv~Q 251 (1458)
+.+..+...+|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|+++... ..|+.+|+|+|
T Consensus 8 l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ 84 (240)
T COG1126 8 LSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQ 84 (240)
T ss_pred eeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecc
Confidence 345566788999999999999999999999999999999999999998 99999999866422 24678999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccc
Q 000506 252 NDLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICAD 331 (1458)
Q Consensus 252 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d 331 (1458)
+..+||++||.||+..+...- ...++. +.+......|+.+||.+.+|
T Consensus 85 ~fnLFPHlTvleNv~lap~~v---------~~~~k~------------------------eA~~~A~~lL~~VGL~~ka~ 131 (240)
T COG1126 85 QFNLFPHLTVLENVTLAPVKV---------KKLSKA------------------------EAREKALELLEKVGLADKAD 131 (240)
T ss_pred cccccccchHHHHHHhhhHHH---------cCCCHH------------------------HHHHHHHHHHHHcCchhhhh
Confidence 999999999999999864321 011111 11223455899999999999
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
..+.. |||||||||+|||||+.+|+++++|||||+|||....++.+.++++++. +.+.+.++|.+..+.+.+|
T Consensus 132 ~yP~q-----LSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e--GmTMivVTHEM~FAr~Vad 204 (240)
T COG1126 132 AYPAQ-----LSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMIIVTHEMGFAREVAD 204 (240)
T ss_pred hCccc-----cCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc--CCeEEEEechhHHHHHhhh
Confidence 98877 9999999999999999999999999999999999999999999999974 4566667899999999999
Q ss_pred EEEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHH
Q 000506 412 NIILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQE 453 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~e 453 (1458)
||+.|++|+++.+|+++++ |..|.+....+|+..
T Consensus 205 rviFmd~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 205 RVIFMDQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eEEEeeCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 9999999999999999887 456766667777654
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=2e-41 Score=392.80 Aligned_cols=202 Identities=19% Similarity=0.221 Sum_probs=157.8
Q ss_pred eEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCee
Q 000506 854 LSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYP 933 (1458)
Q Consensus 854 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1458)
..+.+.|+++.++. +..++++++|-+.+++.+|++|||||||||||+++.|... +..|.|.-.-+.
T Consensus 388 pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H~ 453 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSHN 453 (614)
T ss_pred CeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--cccccccccccc
Confidence 35788999887752 1258999999999999999999999999999999999887 467877543322
Q ss_pred CCcccccceEEEEccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 934 KNQATFARVSGYCEQND--IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 934 ~~~~~~~~~~gyv~Q~~--~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
.+++..|+- .+--..++-|+++=.. ..+.+.+.+..++..+||....+... .++||+|
T Consensus 454 --------~~~~y~Qh~~e~ldl~~s~le~~~~~~--------~~~~~~e~~r~ilgrfgLtgd~q~~p----~~~LS~G 513 (614)
T KOG0927|consen 454 --------KLPRYNQHLAEQLDLDKSSLEFMMPKF--------PDEKELEEMRSILGRFGLTGDAQVVP----MSQLSDG 513 (614)
T ss_pred --------cchhhhhhhHhhcCcchhHHHHHHHhc--------cccchHHHHHHHHHHhCCCccccccc----hhhcccc
Confidence 233444432 2333456666554211 11345567889999999995444331 4589999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
||+||..|+.++..|.||+|||||+|||..+...+-+.|.++ ..+||.++||.. -|-+..+++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr-lI~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR-LISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh-HHHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999999876 458999999976 4778899999999988889998
Q ss_pred CC
Q 000506 1092 PL 1093 (1458)
Q Consensus 1092 ~~ 1093 (1458)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 75
No 48
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.2e-42 Score=366.43 Aligned_cols=231 Identities=26% Similarity=0.392 Sum_probs=202.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+++++++.++ +.+.+|+|||++|++||+++||||||+||||||+.|.|+.+ +.+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcch
Confidence 57888888765 45789999999999999999999999999999999999988 4899999999986
Q ss_pred Cc------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCC
Q 000506 935 NQ------ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL-TNAMVGLPGVDG 1007 (1458)
Q Consensus 935 ~~------~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 1007 (1458)
.+ ...++++|+++|+-.+|..+||+||+.|. +|.....+++..++.+..-|+.+||... .+.. +++
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafp--lre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFP--LREHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhhee--hHhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 23567899999999999999999999985 4455567788888889999999999887 5655 468
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1008 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
||||+|||+++|||++.+|+|||+||||+||||.++..+-++|+++.++ |.|++++|||.+ +++..+|++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877 999999999987 69999999999985 79
Q ss_pred EEEeCCCCc----chHHHHHHHHhCCC
Q 000506 1087 VIYAGPLGR----QSQKLVEYFEAVPG 1109 (1458)
Q Consensus 1087 ~~~~G~~~~----~~~~~~~~f~~~~g 1109 (1458)
++..|+.++ +..-+.+||.+..+
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~~ 250 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIRD 250 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCCC
Confidence 999999753 22457788887643
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-42 Score=379.53 Aligned_cols=219 Identities=24% Similarity=0.342 Sum_probs=193.5
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
+++++|+..+... ..+...+|+|||++|++||++||+|.||||||||++++.++.. +.+|+|.++|.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 5678887665321 1123579999999999999999999999999999999999987 58999999997753
Q ss_pred c------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 936 Q------ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
. ...|+.+|+++|+..++...||.||+.|...+.. .++++++++|.++++.+||.+.++.+. .+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcC
Confidence 2 3467889999999999999999999999887764 568899999999999999999998874 4899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI 1088 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~ 1088 (1458)
|||||||+|||||+.+|+||++|||||+|||.+...|.++|+++.++ |.||+++||++. -+.+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999765 999999999986 37789999999985 8999
Q ss_pred EeCCCC
Q 000506 1089 YAGPLG 1094 (1458)
Q Consensus 1089 ~~G~~~ 1094 (1458)
..|+..
T Consensus 222 E~G~v~ 227 (339)
T COG1135 222 EEGTVS 227 (339)
T ss_pred EeccHH
Confidence 999863
No 50
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.6e-42 Score=396.55 Aligned_cols=224 Identities=31% Similarity=0.455 Sum_probs=195.0
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++|++..+.. ++.+|+||||+|++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~k~~~~------------~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~ 69 (293)
T COG1131 4 VIEVRNLTKKYGG------------DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDV 69 (293)
T ss_pred eeeecceEEEeCC------------CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeC
Confidence 3566777766530 3679999999999999999999999999999999999987 4899999999886
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 935 NQ--ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 935 ~~--~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
.. ...++.+||++|++.+++.+||+|+|.|.+.++.+.. +..+++++++++.++|.+.+++.+ ++||+||
T Consensus 70 ~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~-----~~lS~G~ 141 (293)
T COG1131 70 VKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKV-----RTLSGGM 141 (293)
T ss_pred ccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcch-----hhcCHHH
Confidence 54 4567889999999999999999999999999986543 445678999999999998655554 4899999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
|||++||+||+++|++|||||||+|||+.++..+++.|++++++| +||+++||+++ ++.+.||+|++|++ |++++.|
T Consensus 142 kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g 219 (293)
T COG1131 142 KQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEG 219 (293)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeC
Confidence 999999999999999999999999999999999999999999887 89999999987 78888999999985 7999999
Q ss_pred CCCcchHHHHHHHHh
Q 000506 1092 PLGRQSQKLVEYFEA 1106 (1458)
Q Consensus 1092 ~~~~~~~~~~~~f~~ 1106 (1458)
+. .++...+..
T Consensus 220 ~~----~~l~~~~~~ 230 (293)
T COG1131 220 TP----EELKEKFGG 230 (293)
T ss_pred CH----HHHHHhhcc
Confidence 75 345555443
No 51
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-42 Score=375.89 Aligned_cols=218 Identities=28% Similarity=0.431 Sum_probs=187.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++. + ++|+|||+++++|++++|+||||||||||+|+|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~~------------~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYGN------------R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEECC------------E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 5889999998841 2 59999999999999999999999999999999999877 4799999999987
Q ss_pred CcccccceEEEEccCCC--CCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 935 NQATFARVSGYCEQNDI--HSPHVTVYESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~--~~~~lTV~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
.+..-+..+|||||... ....+||+|-+..+..-+.. -....++.++.++++|+.+|+.+.+|+.+| .||||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGG 143 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGG 143 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcH
Confidence 65444578999999652 23458999999887443321 111223446789999999999999999987 69999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
|+|||.|||||+++|++|+|||||+|+|+.++..++++|++++++|+||++++||++ .+.+.||++++|+ +++++.|
T Consensus 144 Q~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G 220 (254)
T COG1121 144 QKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASG 220 (254)
T ss_pred HHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEecc
Confidence 999999999999999999999999999999999999999999988999999999998 5889999999997 4799999
Q ss_pred CCCc
Q 000506 1092 PLGR 1095 (1458)
Q Consensus 1092 ~~~~ 1095 (1458)
++.+
T Consensus 221 ~~~~ 224 (254)
T COG1121 221 PPEE 224 (254)
T ss_pred Chhh
Confidence 9864
No 52
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=5.8e-42 Score=379.09 Aligned_cols=228 Identities=29% Similarity=0.435 Sum_probs=195.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++.+|+++.|+ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|+++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 467889998874 4679999999999999999999999999999999999887 4789999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCC-CCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSS-DIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
.. ..+++.+|||||.......+||+|.+.++..-.... ....++.++.++++|+.+++.+.+++.+. .|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~-----~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVD-----ELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCccc-----ccCh
Confidence 43 457789999999998888999999999875432211 11234445579999999999999998764 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||||+.|||||+++|+||+||||||.||...+.+++++++++++ +|+|||+++||++. ...+||++++|++ |+++.
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999985 49999999999984 7789999999985 79999
Q ss_pred eCCCCc--chHHHHHHH
Q 000506 1090 AGPLGR--QSQKLVEYF 1104 (1458)
Q Consensus 1090 ~G~~~~--~~~~~~~~f 1104 (1458)
.|++.+ ..+.+.+.|
T Consensus 220 ~G~p~evlT~e~l~~Vy 236 (258)
T COG1120 220 QGTPEEVLTEENLREVY 236 (258)
T ss_pred ecCcchhcCHHHHHHHh
Confidence 998753 334555655
No 53
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=8.5e-37 Score=413.64 Aligned_cols=216 Identities=22% Similarity=0.355 Sum_probs=188.5
Q ss_pred eEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCee
Q 000506 854 LSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYP 933 (1458)
Q Consensus 854 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1458)
..++++|+++.++. +++.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|++
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 46889999887731 13569999999999999999999999999999999999987 479999999998
Q ss_pred CCc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 934 KNQ--ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
+.. ...++.+|||+|++.+++.+||+|++.|.++++. .+.++.++.++++++.+||.+..|+.++ .||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~~-----~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEAQ-----DLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHH
Confidence 643 2346779999999999999999999999876653 2334455678999999999988887754 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
|||||+||+||+.+|+||+|||||+|||+.+++.++++|++++ +|+|||+|||+++ ++...+||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 6999999999986 57778999999985 7899988
Q ss_pred CC
Q 000506 1092 PL 1093 (1458)
Q Consensus 1092 ~~ 1093 (1458)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 75
No 54
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-41 Score=362.45 Aligned_cols=213 Identities=28% Similarity=0.408 Sum_probs=191.0
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++|+||+..+. .+.+++|+|++|++||+++++|||||||||+|++|.++.. +++|+|++||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 46788876653 4679999999999999999999999999999999999987 58999999999865
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc--cccccccCCCCCCCCH
Q 000506 936 Q---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP--LTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSg 1010 (1458)
. ..+||.+|||-|.-.+||++||.||+.+-..+. ..++++.+++++|+|+.+||.+ +++++ +++|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 467899999999999999999999998876654 4577888999999999999985 56665 568999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
||+|||.+||||+++|+||+||||+++|||-++..+++.++++.++ |+|||++|||.. |.+.+.||+.+|++ |+++.
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~~-G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMDA-GEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEecC-CeEEE
Confidence 9999999999999999999999999999999999999999999766 999999999987 78999999999985 78887
Q ss_pred eCCC
Q 000506 1090 AGPL 1093 (1458)
Q Consensus 1090 ~G~~ 1093 (1458)
.+++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 7775
No 55
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-41 Score=365.75 Aligned_cols=204 Identities=25% Similarity=0.382 Sum_probs=182.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++++++++. ...+|+|||++|.+||+++|+||||||||||||+|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 467788887764 2579999999999999999999999999999999999987 5899999999987
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 935 NQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
. .....+|||+|++.++|-.||+||+.|+...+. .+.+++.+++++.|+.+||.+..|.+. .+|||||||
T Consensus 68 ~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQ 137 (248)
T COG1116 68 T--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQ 137 (248)
T ss_pred C--CCCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHH
Confidence 3 335678999999999999999999999887653 455667779999999999999999874 589999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
||+|||||+.+|+||+||||+++||+.|+..+++.|.++.+ .++|||++|||.+ |...+.|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999865 4899999999987 677899999999864
No 56
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-41 Score=388.13 Aligned_cols=223 Identities=31% Similarity=0.440 Sum_probs=196.3
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcccc-ceEEEecCCCCCCC
Q 000506 179 KKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQ-RTCAYISQNDLHFG 257 (1458)
Q Consensus 179 ~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~-~~~~yv~Q~d~~~~ 257 (1458)
..+...+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|+++++..++ |.+|+|+|+..+||
T Consensus 12 ~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyP 88 (338)
T COG3839 12 SFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYP 88 (338)
T ss_pred EcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccC
Confidence 333333999999999999999999999999999999999999998 99999999999998774 78999999999999
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCc
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQ 337 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 337 (1458)
+|||+||+.|+.+.++... .+ .+.+++.+.+.|+|++..|+++..
T Consensus 89 hmtV~~Niaf~Lk~~~~~k--------------------~e--------------i~~rV~eva~~L~l~~lL~r~P~~- 133 (338)
T COG3839 89 HMTVYENIAFGLKLRGVPK--------------------AE--------------IDKRVKEVAKLLGLEHLLNRKPLQ- 133 (338)
T ss_pred CCcHHHHhhhhhhhCCCch--------------------HH--------------HHHHHHHHHHHcCChhHHhcCccc-
Confidence 9999999999998765421 11 122456789999999999998877
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
|||||||||++||||+.+|++++||||+|.||+..+.++...++++.+..+ ++++.++|+..|+..++|||++|+
T Consensus 134 ----LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~-~T~IYVTHDq~EAmtladri~Vm~ 208 (338)
T COG3839 134 ----LSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLG-TTTIYVTHDQVEAMTLADRIVVMN 208 (338)
T ss_pred ----CChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcC-CcEEEEcCCHHHHHhhCCEEEEEe
Confidence 999999999999999999999999999999999999999999999877655 566668899999999999999999
Q ss_pred CCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHH
Q 000506 418 EGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQ 452 (1458)
Q Consensus 418 ~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ 452 (1458)
+|++...|++.++ |..|.+.-+|.|+-
T Consensus 209 ~G~i~Q~g~p~el--------y~~P~n~fVA~FiG 235 (338)
T COG3839 209 DGRIQQVGTPLEL--------YERPANLFVAGFIG 235 (338)
T ss_pred CCeeeecCChHHH--------hhCccchhhhhhcC
Confidence 9999999999998 45677766777653
No 57
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6e-41 Score=364.03 Aligned_cols=208 Identities=28% Similarity=0.458 Sum_probs=176.6
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|++..+... .....+|++||++|++||++||||||||||||||++|.|...+ ++|.|.++|.+...
T Consensus 3 ~~~~v~k~y~~~---------~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~ 71 (226)
T COG1136 3 ELKNVSKIYGLG---------GEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTK 71 (226)
T ss_pred EEeeeEEEeccC---------CcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCc
Confidence 466776655422 1225799999999999999999999999999999999999874 89999999987542
Q ss_pred ------ccc-cceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccc-ccccCCCCCCC
Q 000506 937 ------ATF-ARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTN-AMVGLPGVDGL 1008 (1458)
Q Consensus 937 ------~~~-~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~vg~~~~~~L 1008 (1458)
..+ ++.+|||+|+..+.|.+||+||+.+...+... ...++++.++++++.+||.+..+ .. +.+|
T Consensus 72 l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eL 143 (226)
T COG1136 72 LSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSEL 143 (226)
T ss_pred CCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhc
Confidence 123 35799999999999999999999987655432 22256677899999999997766 54 3589
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1009 SgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
||||||||+|||||+.+|+||+.||||.+||+.++..|++++++++++ |+|||++|||| ++...|||++.|.+|+
T Consensus 144 SGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 144 SGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999999999999999999999999999866 99999999997 5888999999998743
No 58
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-41 Score=359.40 Aligned_cols=220 Identities=27% Similarity=0.378 Sum_probs=190.0
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++..++ +++++|+|||+.|++||++||+|+|||||||||++|.|... +.+|+|.+||..+
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 578899887774 35789999999999999999999999999999999999766 5799999999764
Q ss_pred Cc------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhc-----CCCCCHHHHHHHHHHHHHHcCCCccccccccCC
Q 000506 935 NQ------ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRL-----SSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLP 1003 (1458)
Q Consensus 935 ~~------~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 1003 (1458)
.. ..+++.+||++|+..+.+.++|.+|++.+..-+. --....++.+..+-+.|+.+|+.+.+-++.+
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~-- 146 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAS-- 146 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc--
Confidence 32 3467889999999999999999999987642221 1123445566778899999999998877754
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1004 GVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1004 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
.|||||+|||+|||||+++|+||+.|||+++|||.++..||+.|++++++ |.|||++.||... ..++|||++-|+
T Consensus 147 ---~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 147 ---TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred ---cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 79999999999999999999999999999999999999999999999754 9999999999874 678999999998
Q ss_pred cCcEEEEeCCCCc
Q 000506 1083 RGGQVIYAGPLGR 1095 (1458)
Q Consensus 1083 ~gG~~~~~G~~~~ 1095 (1458)
+ |+++|.||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 5 89999999864
No 59
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-41 Score=359.42 Aligned_cols=213 Identities=29% Similarity=0.412 Sum_probs=188.2
Q ss_pred ccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCC
Q 000506 177 PSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQND 253 (1458)
Q Consensus 177 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d 253 (1458)
+++..++++++|+|++|++||+++++|||||||||+||+|.+++.|+ +|+|.+||+++.+.. .|+.+|||-|.-
T Consensus 8 sk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqi 84 (309)
T COG1125 8 SKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQI 84 (309)
T ss_pred ehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhc
Confidence 44556778999999999999999999999999999999999999998 999999999988754 378899999999
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc--ccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI--CAD 331 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~--~~d 331 (1458)
.+||++||.||+.+...+++.... +.+.+++++|+.+||+. .++
T Consensus 85 gLFPh~Tv~eNIa~VP~L~~w~k~----------------------------------~i~~r~~ELl~lvgL~p~~~~~ 130 (309)
T COG1125 85 GLFPHLTVAENIATVPKLLGWDKE----------------------------------RIKKRADELLDLVGLDPSEYAD 130 (309)
T ss_pred ccCCCccHHHHHHhhhhhcCCCHH----------------------------------HHHHHHHHHHHHhCCCHHHHhh
Confidence 999999999999987766554211 11234677999999974 677
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
..+.+ |||||+|||.+||||+.+|++++||||+++|||.++.++.+.++++.++.++ +|+.++|+.+|+..++|
T Consensus 131 RyP~e-----LSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~k-TivfVTHDidEA~kLad 204 (309)
T COG1125 131 RYPHE-----LSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGK-TIVFVTHDIDEALKLAD 204 (309)
T ss_pred cCchh-----cCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCC-EEEEEecCHHHHHhhhc
Confidence 77665 9999999999999999999999999999999999999999999999887765 55668899999999999
Q ss_pred EEEEEcCCeEEEEcChhhHHH
Q 000506 412 NIILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~~ 432 (1458)
||++|++|+++..+++++++.
T Consensus 205 ri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 205 RIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred eEEEecCCeEEEeCCHHHHHh
Confidence 999999999999999999864
No 60
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-41 Score=390.33 Aligned_cols=228 Identities=31% Similarity=0.431 Sum_probs=201.1
Q ss_pred ccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCC
Q 000506 177 PSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLH 255 (1458)
Q Consensus 177 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~ 255 (1458)
.+..+...+++|+|+.|++||+++|+|||||||||||++|||+..|+ +|+|.++|++++...+ +|.+++|+|+..+
T Consensus 12 ~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YAL 88 (352)
T COG3842 12 SKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYAL 88 (352)
T ss_pred eeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCccc
Confidence 34455778999999999999999999999999999999999999998 9999999999998776 5789999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
||+|||+||++|+.+.+.... +.+ .+.+++.+++.++|++.++.++.
T Consensus 89 FPHltV~~NVafGLk~~~~~~-------------------~~~--------------i~~rv~e~L~lV~L~~~~~R~p~ 135 (352)
T COG3842 89 FPHMTVEENVAFGLKVRKKLK-------------------KAE--------------IKARVEEALELVGLEGFADRKPH 135 (352)
T ss_pred CCCCcHHHHhhhhhhhcCCCC-------------------HHH--------------HHHHHHHHHHHcCchhhhhhChh
Confidence 999999999999987432111 011 12246778999999999998887
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
. |||||||||+|||||+.+|++||||||.|+||..-+.++..-|+++.+..+ .+.+.++|+.+|+..++|||++
T Consensus 136 q-----LSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~g-iT~i~VTHDqeEAl~msDrI~V 209 (352)
T COG3842 136 Q-----LSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELG-ITFVYVTHDQEEALAMSDRIAV 209 (352)
T ss_pred h-----hChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcC-CeEEEEECCHHHHhhhccceEE
Confidence 7 999999999999999999999999999999999999999999999998765 5566688999999999999999
Q ss_pred EcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHh
Q 000506 416 LSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEV 454 (1458)
Q Consensus 416 L~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev 454 (1458)
|++|+|...|+++++ |..|...-+|+|+-+.
T Consensus 210 m~~G~I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 210 MNDGRIEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred ccCCceeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 999999999999998 5678888888887753
No 61
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-41 Score=369.64 Aligned_cols=225 Identities=28% Similarity=0.358 Sum_probs=195.9
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCCC
Q 000506 181 RKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQNDL 254 (1458)
Q Consensus 181 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~ 254 (1458)
+...+|+|||+.|++||+++|+|+||||||||++++.++-.|+ +|+|.++|.++.... .|+.||+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999998 999999999887654 2578999999999
Q ss_pred CCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccc
Q 000506 255 HFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMV 334 (1458)
Q Consensus 255 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 334 (1458)
++...||.||++|..+..+... .+ .+.++..+++.+||++.+|..+
T Consensus 94 LLssrTV~~NvA~PLeiag~~k----------~e------------------------i~~RV~elLelVgL~dk~~~yP 139 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVPK----------AE------------------------IKQRVAELLELVGLSDKADRYP 139 (339)
T ss_pred ccccchHHhhhhhhHhhcCCCH----------HH------------------------HHHHHHHHHHHcCChhhhccCc
Confidence 9999999999999888765321 11 1234566899999999999888
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEE
Q 000506 335 GDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNII 414 (1458)
Q Consensus 335 g~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~ 414 (1458)
.+ |||||||||+|||||+.+|+||++|||||+|||.|+..|.+.|+++.++.+ .+|+.++|-++-+-+.||||.
T Consensus 140 ~q-----LSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lg-lTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 140 AQ-----LSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELG-LTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred hh-----cCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHhhhhe
Confidence 87 999999999999999999999999999999999999999999999998766 555667788999999999999
Q ss_pred EEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcC
Q 000506 415 LLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTS 456 (1458)
Q Consensus 415 lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s 456 (1458)
+|++|+++++|+..++ |..|.+.-...|+.+...
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~~ 247 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETLE 247 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhcc
Confidence 9999999999999988 455666666666666543
No 62
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=350.24 Aligned_cols=202 Identities=29% Similarity=0.423 Sum_probs=186.1
Q ss_pred ceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC--cccccceEEEEccCCCCCCCCCH
Q 000506 881 LQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN--QATFARVSGYCEQNDIHSPHVTV 958 (1458)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~--~~~~~~~~gyv~Q~~~~~~~lTV 958 (1458)
.++++||||+++.||++||+|+|||||||+|++|++... +++|.|++||.+.. +...++.+|.++.+..++..+|+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 358999999999999999999999999999999999987 58999999998753 34578999999988889999999
Q ss_pred HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000506 959 YESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1458)
Q Consensus 959 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1038 (1458)
+|||.|.+.+. ++..++.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++||||||||
T Consensus 93 rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 99999998876 34567778899999999999999999987 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1039 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
|..+...+.+.++++.++|++||+++|.++ |+..+||++++|++ |++++.|...
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 999999999999999989999999999986 78889999999996 7999999874
No 63
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-41 Score=367.81 Aligned_cols=206 Identities=31% Similarity=0.478 Sum_probs=186.7
Q ss_pred ccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCe---eCCc-ccccceEEEEccCCCCCC
Q 000506 879 DRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGY---PKNQ-ATFARVSGYCEQNDIHSP 954 (1458)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~~ 954 (1458)
+...+++|||+.|+.||++||+|||||||||||++|||+.+ ++.|.|.+||. +.++ ..-.|.+|||+|+..+|+
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 34678999999999999999999999999999999999987 58999999999 5444 233578999999999999
Q ss_pred CCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000506 955 HVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1458)
Q Consensus 955 ~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1034 (1458)
++||.+|+.|+.+++ ....++.+++.+++++|+.+.|++..+.+ +.+|||||||||++||||+..|++|+||||
T Consensus 91 HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEP 164 (345)
T COG1118 91 HMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEP 164 (345)
T ss_pred cchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCC
Confidence 999999999998877 33456677888999999999999999887 458999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1035 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1035 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
+++||+.-+..+.+.|+++.+. |.|+|++|||+. +..+.+|||++|++ |+++..||..
T Consensus 165 f~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 165 FGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 9999999999999999999877 999999999986 89999999999986 7999999863
No 64
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-41 Score=366.97 Aligned_cols=225 Identities=31% Similarity=0.475 Sum_probs=190.1
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCe---ecCCccc-cceEEEecCCCCC
Q 000506 180 KRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGH---EFKEFVP-QRTCAYISQNDLH 255 (1458)
Q Consensus 180 ~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~---~~~~~~~-~~~~~yv~Q~d~~ 255 (1458)
-+...+++|||+.|+.||+++|+|||||||||||++|||+..|+ +|.|.+||+ +.++... .|.||||+|+..+
T Consensus 12 ~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YAL 88 (345)
T COG1118 12 FGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYAL 88 (345)
T ss_pred cccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhh
Confidence 35567899999999999999999999999999999999999998 999999999 5555333 4789999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
|++|||.+||+|+.+++.. + |++ .+.+..++++|+.+.|++.++..+-
T Consensus 89 F~HmtVa~NIAFGl~~~~~--~-----------------p~~-------------~~~r~rv~elL~lvqL~~la~ryP~ 136 (345)
T COG1118 89 FPHMTVADNIAFGLKVRKE--R-----------------PSE-------------AEIRARVEELLRLVQLEGLADRYPA 136 (345)
T ss_pred cccchHHhhhhhccccccc--C-----------------CCh-------------hhHHHHHHHHHHHhcccchhhcCch
Confidence 9999999999999876511 0 100 0112245668999999999988877
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
+ |||||||||++||||+..|++|+||||+++||...+.++-+.|+++.+..+ ++.+.++|+.+|+++++|||++
T Consensus 137 Q-----LSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~-~ttvfVTHD~eea~~ladrvvv 210 (345)
T COG1118 137 Q-----LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLG-VTTVFVTHDQEEALELADRVVV 210 (345)
T ss_pred h-----cChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhC-ceEEEEeCCHHHHHhhcceEEE
Confidence 6 999999999999999999999999999999999999999999999987655 4555678999999999999999
Q ss_pred EcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHH
Q 000506 416 LSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQE 453 (1458)
Q Consensus 416 L~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~e 453 (1458)
|++|+|...||++++. ..|...-+..|+-+
T Consensus 211 l~~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 211 LNQGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred ecCCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 9999999999999983 44555555555443
No 65
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.9e-40 Score=383.72 Aligned_cols=218 Identities=32% Similarity=0.462 Sum_probs=188.7
Q ss_pred cccccc-cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc--cccceEEEecCC
Q 000506 176 LPSKKR-KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF--VPQRTCAYISQN 252 (1458)
Q Consensus 176 ~~~~~~-~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~ 252 (1458)
+.++.+ .+.+|+|||++|++||+++|+||||||||||||+|+|++.|+ +|+|.++|++.... ..++.+||++|+
T Consensus 10 l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~ 86 (293)
T COG1131 10 LTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQE 86 (293)
T ss_pred eEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccC
Confidence 345556 578999999999999999999999999999999999999998 99999999987653 346789999999
Q ss_pred CCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccc
Q 000506 253 DLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADT 332 (1458)
Q Consensus 253 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 332 (1458)
+.+++.+||+|+|.|.+++++..... ....++.+++.+||++.+++
T Consensus 87 ~~~~~~lT~~e~l~~~~~l~~~~~~~----------------------------------~~~~~~~~l~~~~L~~~~~~ 132 (293)
T COG1131 87 PSLYPELTVRENLEFFARLYGLSKEE----------------------------------AEERIEELLELFGLEDKANK 132 (293)
T ss_pred CCCCccccHHHHHHHHHHHhCCChhH----------------------------------HHHHHHHHHHHcCCchhhCc
Confidence 99999999999999999887643100 11235678999999986666
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
++++ ||+||||||+||.||+++|+++||||||+|||+.++.++.+.|+++++. ++++|+..+|..+++..+||+
T Consensus 133 ~~~~-----lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~ 206 (293)
T COG1131 133 KVRT-----LSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDR 206 (293)
T ss_pred chhh-----cCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCE
Confidence 6665 9999999999999999999999999999999999999999999999975 335666677888999999999
Q ss_pred EEEEcCCeEEEEcChhhHHHHHHh
Q 000506 413 IILLSEGQIVYQGPREKVLEFFEY 436 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~~~F~~ 436 (1458)
|++|++|++++.|+.+++...+..
T Consensus 207 v~il~~G~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 207 VIILNDGKIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCEEEEeCCHHHHHHhhcc
Confidence 999999999999999998765543
No 66
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.6e-40 Score=353.47 Aligned_cols=214 Identities=25% Similarity=0.391 Sum_probs=183.3
Q ss_pred ccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEec
Q 000506 177 PSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYIS 250 (1458)
Q Consensus 177 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~ 250 (1458)
.++.+.+.|++|||+.|++||+++|+|||||||||||++|.|+++|+ +|+|.+.|+++.... .++++|+++
T Consensus 15 ~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlF 91 (263)
T COG1127 15 TKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLF 91 (263)
T ss_pred eeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEe
Confidence 34556778999999999999999999999999999999999999998 999999999987654 246799999
Q ss_pred CCCCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccc-
Q 000506 251 QNDLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDIC- 329 (1458)
Q Consensus 251 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~- 329 (1458)
|+-.+|..+||+||+.|-.+-.. .+ |+..++. .+..-|+..||...
T Consensus 92 Q~gALFssltV~eNVafplre~~---------~l----------p~~~i~~--------------lv~~KL~~VGL~~~~ 138 (263)
T COG1127 92 QQGALFSSLTVFENVAFPLREHT---------KL----------PESLIRE--------------LVLMKLELVGLRGAA 138 (263)
T ss_pred eccccccccchhHhhheehHhhc---------cC----------CHHHHHH--------------HHHHHHHhcCCChhh
Confidence 99999999999999999655321 11 1111111 22334788999876
Q ss_pred ccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhc
Q 000506 330 ADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDL 409 (1458)
Q Consensus 330 ~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~ 409 (1458)
+|.++.+ ||||++||++||||++.+|+++|+||||+||||.++..+.++++++.+..+. ++++++|+.++++..
T Consensus 139 ~~~~PsE-----LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~-T~i~VTHDl~s~~~i 212 (263)
T COG1127 139 ADLYPSE-----LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGL-TVIMVTHDLDSLLTI 212 (263)
T ss_pred hhhCchh-----hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCC-EEEEEECChHHHHhh
Confidence 7777766 9999999999999999999999999999999999999999999999987664 555678899999999
Q ss_pred cCEEEEEcCCeEEEEcChhhHHH
Q 000506 410 FDNIILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 410 ~D~v~lL~~G~iv~~G~~~~~~~ 432 (1458)
+|+|++|.+|+|+..|+++++.+
T Consensus 213 ~Drv~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 213 ADRVAVLADGKVIAEGTPEELLA 235 (263)
T ss_pred hceEEEEeCCEEEEeCCHHHHHh
Confidence 99999999999999999999864
No 67
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.1e-40 Score=368.99 Aligned_cols=213 Identities=31% Similarity=0.454 Sum_probs=182.4
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCCCC
Q 000506 180 KRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDLHF 256 (1458)
Q Consensus 180 ~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~ 256 (1458)
.++++||+|+|+++++||+++|+||||||||||||+|+|.++|. +|+|.++|+++.+... .+.+|||||.....
T Consensus 12 y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~ 88 (258)
T COG1120 12 YGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAP 88 (258)
T ss_pred ECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCC
Confidence 34567999999999999999999999999999999999999998 9999999999887654 37899999998878
Q ss_pred CCCCHHHHHHHhhhhc-cCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 257 GEMTVRETMDFSGRCL-GVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
..+||+|-+.++..-. +. .. . + .+++...++..|+.+|+.+.++..+.
T Consensus 89 ~~~tV~d~V~~GR~p~~~~---~~---~-----------~--------------~~~D~~~v~~aL~~~~~~~la~r~~~ 137 (258)
T COG1120 89 FGLTVYELVLLGRYPHLGL---FG---R-----------P--------------SKEDEEIVEEALELLGLEHLADRPVD 137 (258)
T ss_pred CCcEEeehHhhcCCccccc---cc---C-----------C--------------CHhHHHHHHHHHHHhCcHHHhcCccc
Confidence 8899999998863211 10 00 0 0 01112246678999999999999998
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
+ |||||||||.||+||+.+|++|+||||||.||...+.++++.+++++++.+ .++++++|+...+.++||++++
T Consensus 138 ~-----LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~-~tvv~vlHDlN~A~ryad~~i~ 211 (258)
T COG1120 138 E-----LSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKG-LTVVMVLHDLNLAARYADHLIL 211 (258)
T ss_pred c-----cChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEE
Confidence 8 999999999999999999999999999999999999999999999997655 4555567888999999999999
Q ss_pred EcCCeEEEEcChhhHHH
Q 000506 416 LSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 416 L~~G~iv~~G~~~~~~~ 432 (1458)
|++|+++.+|++++++.
T Consensus 212 lk~G~i~a~G~p~evlT 228 (258)
T COG1120 212 LKDGKIVAQGTPEEVLT 228 (258)
T ss_pred EECCeEEeecCcchhcC
Confidence 99999999999988753
No 68
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-40 Score=378.28 Aligned_cols=215 Identities=30% Similarity=0.449 Sum_probs=194.2
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++..+. ...+|+|||++|++||+++|+|||||||||||++|||+.. +++|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 577888887663 1228999999999999999999999999999999999987 5899999999998
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 935 NQ-ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
+. ...+|.+|+|+|+..++|++||+||+.|+.+++ ..++++.+++|+++.+.|+|.+..|++. ++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhH
Confidence 76 345689999999999999999999999998776 3467788899999999999999999874 58999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
|||+|||||+++|++++||||.|.||+..+..+...|+++.++ |.|+|.+|||. .|...++||+++|+ +|++...|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq-~EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQ-VEAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCH-HHHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999999766 89999999996 48999999999998 589999988
Q ss_pred CC
Q 000506 1093 LG 1094 (1458)
Q Consensus 1093 ~~ 1094 (1458)
+.
T Consensus 218 p~ 219 (338)
T COG3839 218 PL 219 (338)
T ss_pred hH
Confidence 74
No 69
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.7e-40 Score=336.57 Aligned_cols=213 Identities=28% Similarity=0.378 Sum_probs=184.6
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
+.|+||+..|.. .+++|+|||++|++||++-|+||||||||||||+|.+... ++.|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 567888766642 2569999999999999999999999999999999999877 58999999999864
Q ss_pred c------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 936 Q------ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
. .-++|++|+|+||..+.++.||+||+.|...... .+.++.+++|.++|+.+||.+.++.. +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 3 2357899999999999999999999999877653 45677788999999999999988876 45899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||+|||+||||++.+|++|+.||||-+||+..+..||+++.++.+.|.|||+.||+.+. +-.+-.|++.|.+ |+++.
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~l-v~~~~~rvl~l~~-Grl~~ 217 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLEL-VNRMRHRVLALED-GRLVR 217 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHH-HHhccCcEEEEeC-CEEEe
Confidence 999999999999999999999999999999999999999999999999999999998542 4444577888875 78876
Q ss_pred eCC
Q 000506 1090 AGP 1092 (1458)
Q Consensus 1090 ~G~ 1092 (1458)
...
T Consensus 218 d~~ 220 (223)
T COG2884 218 DES 220 (223)
T ss_pred ccc
Confidence 543
No 70
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-40 Score=355.56 Aligned_cols=196 Identities=27% Similarity=0.383 Sum_probs=173.1
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCC
Q 000506 181 RKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMT 260 (1458)
Q Consensus 181 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 260 (1458)
...++|+|+|++|.+||+++|+||||||||||||+|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|-+|
T Consensus 14 ~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~T 88 (248)
T COG1116 14 GGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLT 88 (248)
T ss_pred CceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhh
Confidence 3367999999999999999999999999999999999999998 999999999883 45678999999999999999
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+||+.|+...++... .| ....++..|+.+||.+..|..+..
T Consensus 89 v~~NV~l~l~~~~~~~----------~e------------------------~~~~a~~~L~~VgL~~~~~~~P~q---- 130 (248)
T COG1116 89 VLDNVALGLELRGKSK----------AE------------------------ARERAKELLELVGLAGFEDKYPHQ---- 130 (248)
T ss_pred HHhhheehhhccccch----------Hh------------------------HHHHHHHHHHHcCCcchhhcCccc----
Confidence 9999999887654211 01 112356689999999999988877
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC--
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE-- 418 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~-- 418 (1458)
|||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.++.+ .+++.++|+.+|+..++|||++|++
T Consensus 131 -LSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~-~TvllVTHdi~EAv~LsdRivvl~~~P 208 (248)
T COG1116 131 -LSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETR-KTVLLVTHDVDEAVYLADRVVVLSNRP 208 (248)
T ss_pred -cChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHhhhCEEEEecCCC
Confidence 999999999999999999999999999999999999999999999987654 5667788999999999999999998
Q ss_pred CeE
Q 000506 419 GQI 421 (1458)
Q Consensus 419 G~i 421 (1458)
|+|
T Consensus 209 ~~i 211 (248)
T COG1116 209 GRI 211 (248)
T ss_pred cce
Confidence 444
No 71
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=358.77 Aligned_cols=207 Identities=29% Similarity=0.462 Sum_probs=177.6
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCC---CCCCCCCC
Q 000506 184 QILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQN---DLHFGEMT 260 (1458)
Q Consensus 184 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~---d~~~~~lT 260 (1458)
++|+|||+.+++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+..+...+..||||||. |+-|| +|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-IT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cC
Confidence 5999999999999999999999999999999999999998 99999999988776666789999995 56676 59
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+|.+..+..-+. .......++ ++..++.+|+.+|+.+.+|..+|+
T Consensus 94 V~d~V~~g~~~~~-----g~~~~~~~~-------------------------d~~~v~~aL~~Vgm~~~~~r~i~~---- 139 (254)
T COG1121 94 VKDVVLLGRYGKK-----GWFRRLNKK-------------------------DKEKVDEALERVGMEDLRDRQIGE---- 139 (254)
T ss_pred HHHHHHccCcccc-----cccccccHH-------------------------HHHHHHHHHHHcCchhhhCCcccc----
Confidence 9999987522110 000011111 123567799999999999999999
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
|||||+|||-|||||+.+|++|+|||||+|+|+.++..|.+.|+++.++ +.+|++++|+...+.++||+|+.| +++
T Consensus 140 -LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~L-n~~ 215 (254)
T COG1121 140 -LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICL-NRH 215 (254)
T ss_pred -cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEE-cCe
Confidence 9999999999999999999999999999999999999999999999875 466777899999999999999999 578
Q ss_pred EEEEcChhhHHH
Q 000506 421 IVYQGPREKVLE 432 (1458)
Q Consensus 421 iv~~G~~~~~~~ 432 (1458)
+++.|+++++.+
T Consensus 216 ~~~~G~~~~~~~ 227 (254)
T COG1121 216 LIASGPPEEVLT 227 (254)
T ss_pred eEeccChhhccC
Confidence 999999988753
No 72
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-40 Score=377.82 Aligned_cols=216 Identities=28% Similarity=0.422 Sum_probs=194.2
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++..+. ...+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.++|+++
T Consensus 5 ~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 578888877663 4679999999999999999999999999999999999987 5899999999998
Q ss_pred Ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 935 NQA-TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
... ..+|.+|+|+|+..+||++||+||+.|+.+++ ....+++.+++|+++++.++|.+..++++ .+||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHH
Confidence 653 45789999999999999999999999997743 33455678889999999999999988874 58999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
|||+|||||+.+|++|+||||.|+||..-+..+..-|+++.++ |.|.|++|||.. |...+.|||.+|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 9999999999999999999999999999999999999998755 999999999975 78899999999985 79999998
Q ss_pred CC
Q 000506 1093 LG 1094 (1458)
Q Consensus 1093 ~~ 1094 (1458)
+.
T Consensus 221 P~ 222 (352)
T COG3842 221 PE 222 (352)
T ss_pred HH
Confidence 74
No 73
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=346.03 Aligned_cols=217 Identities=28% Similarity=0.380 Sum_probs=181.9
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc------cceEEEecCCCC
Q 000506 181 RKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP------QRTCAYISQNDL 254 (1458)
Q Consensus 181 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~ 254 (1458)
..+++|+|||+.|++||+++|+|||||||||||++|.|+.+++ +|+|.+||.++..... ++.+||++|++.
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 4567999999999999999999999999999999999999998 9999999988776542 467999999999
Q ss_pred CCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccc
Q 000506 255 HFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMV 334 (1458)
Q Consensus 255 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 334 (1458)
+.+.+||.||+..+...+. ...+.+ .++.+.+ .+...-..|+.+|+.+.+-++.
T Consensus 92 Lv~r~sv~~NVl~grl~~~--s~~~sl---------fglfsk~---------------dk~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYT--STWRSL---------FGLFSKE---------------DKAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccc--hHHHHH---------hCCCCHH---------------HHHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999987643211 111111 1111111 1122334789999999999998
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEE
Q 000506 335 GDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNII 414 (1458)
Q Consensus 335 g~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~ 414 (1458)
+. |||||+|||+|||||+.+|++++-|||++.||+.++.++++.|+++++..|.|+|+.+ |..+-+.++||||+
T Consensus 146 ~~-----LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nL-H~vdlA~~Y~~Rii 219 (258)
T COG3638 146 ST-----LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNL-HQVDLAKKYADRII 219 (258)
T ss_pred cc-----CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEe-chHHHHHHHHhhhe
Confidence 88 9999999999999999999999999999999999999999999999988777777665 55789999999999
Q ss_pred EEcCCeEEEEcChhhHHH
Q 000506 415 LLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 415 lL~~G~iv~~G~~~~~~~ 432 (1458)
-|++|+|+|+||++++.+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999988654
No 74
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=338.16 Aligned_cols=217 Identities=24% Similarity=0.347 Sum_probs=187.0
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCc---CCCceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~---~~~~~~G~i~i~g 931 (1458)
.++.+|++..|. .+++|+|||+.|++++++||||||||||||||++|.+.. ++-..+|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 578889888773 467999999999999999999999999999999999853 2335789999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL-TNAMVGLPGV 1005 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~ 1005 (1458)
+++.. ..+|+.+|.|+|.+.-|| +|++||+.|+.++....+ ++-++.|++.|+...|++- +|.+-. . .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~-s-a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHK-S-A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhC-C-c
Confidence 97643 357899999999999999 999999999988765433 6677889999999999864 343322 2 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
.+|||||+|||||||||+.+|+||+||||||+|||.+...|-+++.+++ +.-|||++||.+. ......|+...+.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 4799999999999999999999999999999999999999999999997 5689999999886 57778899999986 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
+++++|+.
T Consensus 225 ~LvE~g~T 232 (253)
T COG1117 225 ELVEFGPT 232 (253)
T ss_pred EEEEEcCH
Confidence 99999986
No 75
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.7e-39 Score=374.52 Aligned_cols=214 Identities=29% Similarity=0.422 Sum_probs=188.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++..+. .+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|++.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEec
Confidence 588999988763 2469999999999999999999999999999999999886 4789999999986
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 935 NQ--ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 935 ~~--~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
.. ...++.+|||+|++.+++.+||+|++.|.+.++. .+.++..++++++++.++|.+..++.++ +|||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKVG-----ELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCchh-----hCCHHH
Confidence 43 2356789999999999999999999998665532 2334445678899999999988888764 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999986 68889999999986 79999998
Q ss_pred C
Q 000506 1093 L 1093 (1458)
Q Consensus 1093 ~ 1093 (1458)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 5
No 76
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-39 Score=334.80 Aligned_cols=207 Identities=29% Similarity=0.389 Sum_probs=182.6
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc--cccceEEEecCCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF--VPQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 259 (1458)
..++++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+..+. ..++.+|.++.+.-++..|
T Consensus 14 ~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~Rl 90 (245)
T COG4555 14 KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARL 90 (245)
T ss_pred HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhh
Confidence 345899999999999999999999999999999999999999 99999999987543 2478899999888899999
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
|++|||.|.+++.+.. +.+ .+.+++.+.+.|+|.++.|+++|+
T Consensus 91 T~rEnl~~Fa~L~~l~----------~~~------------------------~kari~~l~k~l~l~~~~~rRv~~--- 133 (245)
T COG4555 91 TARENLKYFARLNGLS----------RKE------------------------IKARIAELSKRLQLLEYLDRRVGE--- 133 (245)
T ss_pred hHHHHHHHHHHHhhhh----------hhH------------------------HHHHHHHHHHHhChHHHHHHHHhh---
Confidence 9999999988875432 221 122456789999999999999998
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
+|-|+||||+|||||+.+|++++|||||||||..+...+.+.++++... + .+++..+|.++|+..+||+|++|++|
T Consensus 134 --~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~e-g-r~viFSSH~m~EvealCDrvivlh~G 209 (245)
T COG4555 134 --FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNE-G-RAVIFSSHIMQEVEALCDRVIVLHKG 209 (245)
T ss_pred --hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcC-C-cEEEEecccHHHHHHhhheEEEEecC
Confidence 9999999999999999999999999999999999999999999998753 4 45666778999999999999999999
Q ss_pred eEEEEcChhhHHH
Q 000506 420 QIVYQGPREKVLE 432 (1458)
Q Consensus 420 ~iv~~G~~~~~~~ 432 (1458)
++++.|+.+++..
T Consensus 210 evv~~gs~~~l~~ 222 (245)
T COG4555 210 EVVLEGSIEALDA 222 (245)
T ss_pred cEEEcCCHHHHHH
Confidence 9999999988754
No 77
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-39 Score=336.94 Aligned_cols=223 Identities=27% Similarity=0.407 Sum_probs=179.7
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCeecCCcc-----ccceEEEecCCC
Q 000506 181 RKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD--DDLKLTGKIKYCGHEFKEFV-----PQRTCAYISQND 253 (1458)
Q Consensus 181 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d 253 (1458)
+++++|+|||+.|+++++||++|||||||||||++|..+.+ |..+++|+|.++|+++.+.. .|+++|+|+|.|
T Consensus 18 g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkP 97 (253)
T COG1117 18 GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKP 97 (253)
T ss_pred CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCC
Confidence 45679999999999999999999999999999999988754 45678999999999986542 378899999999
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc-cccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI-CADT 332 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~dt 332 (1458)
.-|| +|++||+.|+.|..|... +.+ |.. ++..|+.-+|.+ ..|.
T Consensus 98 nPFp-~SIydNVayG~r~~g~~~--~~l------------------dei--------------Ve~sLk~AaLWdEVKDr 142 (253)
T COG1117 98 NPFP-MSIYDNVAYGLRLHGIKD--KEL------------------DEI--------------VESSLKKAALWDEVKDR 142 (253)
T ss_pred CCCC-chHHHHHHHhHHhhccch--HHH------------------HHH--------------HHHHHHHhHhHHHhHHH
Confidence 9999 899999999999877532 111 111 111222222211 1121
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
+ +....+||||||||+.|||||+.+|+|||||||||+|||.++..|.+++.++.+ .-+|+.++|.+..+.+..|+
T Consensus 143 L--~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~ 217 (253)
T COG1117 143 L--HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDY 217 (253)
T ss_pred h--hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHh
Confidence 1 122345999999999999999999999999999999999999999999999975 35666788999999999999
Q ss_pred EEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHH
Q 000506 413 IILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFL 451 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l 451 (1458)
...+..|++++.|+.+++ |..|..+.+.||+
T Consensus 218 taFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 218 TAFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 999999999999999987 4567777676664
No 78
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.5e-38 Score=372.43 Aligned_cols=217 Identities=23% Similarity=0.315 Sum_probs=187.8
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++.. .+.+.+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 5788998877411 012469999999999999999999999999999999999987 47999999999864
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 936 QA------TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
.. ..++.+||++|+..+++..||+||+.|....+ ..+.++.++++.++++.+||.+..|..+ +.||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23568999999999999999999999876533 2345566678999999999999888764 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI 1088 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~ 1088 (1458)
|||||||+|||||+.+|++|+||||||+||+.++..++++|++++++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999875 999999999986 57788999999985 7999
Q ss_pred EeCCC
Q 000506 1089 YAGPL 1093 (1458)
Q Consensus 1089 ~~G~~ 1093 (1458)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 79
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.2e-38 Score=344.02 Aligned_cols=195 Identities=27% Similarity=0.433 Sum_probs=167.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-------cceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-------QRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 255 (1458)
.++|+++|+.|++||+++|+|||||||||||++|.|+..|+ +|.|.++|.+++.... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 67999999999999999999999999999999999999998 9999999998876542 3579999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccc-ccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICAD-TMV 334 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d-t~v 334 (1458)
+|++||+||+.+.+...+.... + .....+.+++.+||++..+ ..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~--------~--------------------------~~~~~~~l~~~lgl~~~~~~~~p 140 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG--------R--------------------------RKRAAEELLEVLGLEDRLLKKKP 140 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh--------H--------------------------HHHHHHHHHHhcCChhhhccCCc
Confidence 9999999999987665543211 0 1113456889999997666 778
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEE
Q 000506 335 GDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNII 414 (1458)
Q Consensus 335 g~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~ 414 (1458)
.+ |||||||||+|||||+.+|++++.||||.+||+.++..+++.+++++++.+ +++++++|+ +++...|||++
T Consensus 141 ~e-----LSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g-~tii~VTHd-~~lA~~~dr~i 213 (226)
T COG1136 141 SE-----LSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERG-KTIIMVTHD-PELAKYADRVI 213 (226)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcC-CEEEEEcCC-HHHHHhCCEEE
Confidence 77 999999999999999999999999999999999999999999999987654 455556665 47888999999
Q ss_pred EEcCCeE
Q 000506 415 LLSEGQI 421 (1458)
Q Consensus 415 lL~~G~i 421 (1458)
.|.+|++
T Consensus 214 ~l~dG~~ 220 (226)
T COG1136 214 ELKDGKI 220 (226)
T ss_pred EEeCCee
Confidence 9999994
No 80
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-38 Score=356.45 Aligned_cols=213 Identities=24% Similarity=0.365 Sum_probs=182.0
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5678877663 2469999999999999999999999999999999999876 478999999987543
Q ss_pred ------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 937 ------ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 937 ------~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
..+++.++|++|++.+++.+||+|++.+...... ..+.++..++++++++.++|.+..++.+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 2345679999999999999999999988643221 2234445567889999999988777665 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
||||||+||+||+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999874 899999999986 57788999999985 78998
Q ss_pred eCCC
Q 000506 1090 AGPL 1093 (1458)
Q Consensus 1090 ~G~~ 1093 (1458)
.|+.
T Consensus 218 ~g~~ 221 (235)
T cd03261 218 EGTP 221 (235)
T ss_pred ecCH
Confidence 8875
No 81
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.4e-39 Score=332.31 Aligned_cols=207 Identities=26% Similarity=0.367 Sum_probs=184.8
Q ss_pred cccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCccc----ccceEEEEccCCCCC
Q 000506 878 EDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQAT----FARVSGYCEQNDIHS 953 (1458)
Q Consensus 878 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~~~~ 953 (1458)
+++++++++||+.|++||+++|+|||||||||.+.++.|... +.+|+|.+||.+++... -+.-+||+||++..|
T Consensus 14 y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 14 YKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred hCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 356789999999999999999999999999999999999987 58999999999876533 234589999999999
Q ss_pred CCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000506 954 PHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1458)
Q Consensus 954 ~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1033 (1458)
..+||+||+......+.. +....+++++++++|+.+++.|+++.... .||||||+|+-|||||+.+|+.++|||
T Consensus 92 r~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a~-----sLSGGERRR~EIARaLa~~P~fiLLDE 165 (243)
T COG1137 92 RKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKAY-----SLSGGERRRVEIARALAANPKFILLDE 165 (243)
T ss_pred hcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCccc-----ccccchHHHHHHHHHHhcCCCEEEecC
Confidence 999999999987766532 23345677788999999999999998743 699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1034 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1034 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
|++|+||.+...|.++++.+++.|.-|++|-|... |....|||.+++.+ |++...|.++
T Consensus 166 PFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 166 PFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred CccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 99999999999999999999999999999999986 78999999999996 7999999874
No 82
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-38 Score=373.21 Aligned_cols=216 Identities=26% Similarity=0.375 Sum_probs=189.1
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++..++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i 68 (356)
T PRK11650 3 GLKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVV 68 (356)
T ss_pred EEEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 377888887762 12469999999999999999999999999999999999877 4799999999986
Q ss_pred Ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 935 NQA-TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
... ..++.+|||+|++.++|++||+||+.|+...+ ..+.++.+++++++++.++|.+..++.+ ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~ 140 (356)
T PRK11650 69 NELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQR 140 (356)
T ss_pred CCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHH
Confidence 432 23578999999999999999999999986543 2345566678999999999999888775 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++.+.+|++++|++ |+++..|+
T Consensus 141 QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~ 218 (356)
T PRK11650 141 QRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGT 218 (356)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECC
Confidence 9999999999999999999999999999999999999999775 999999999986 68899999999985 79999998
Q ss_pred CC
Q 000506 1093 LG 1094 (1458)
Q Consensus 1093 ~~ 1094 (1458)
..
T Consensus 219 ~~ 220 (356)
T PRK11650 219 PV 220 (356)
T ss_pred HH
Confidence 63
No 83
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=4.7e-38 Score=372.81 Aligned_cols=215 Identities=26% Similarity=0.384 Sum_probs=190.0
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|++.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478899988763 2468999999999999999999999999999999999976 5799999999986
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 935 NQ-ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
.. ...+|.+|||+|+..++|++||+||+.|+...+ ..+.++.+++++++++.++|.+..++.+ ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 43 234578999999999999999999999986543 2345566778999999999999888764 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
|||+|||||+.+|++|+||||||+||..++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 78899999999985 79999998
Q ss_pred CC
Q 000506 1093 LG 1094 (1458)
Q Consensus 1093 ~~ 1094 (1458)
..
T Consensus 219 ~~ 220 (353)
T TIGR03265 219 PQ 220 (353)
T ss_pred HH
Confidence 63
No 84
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-38 Score=369.88 Aligned_cols=215 Identities=25% Similarity=0.405 Sum_probs=190.1
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 578999988763 2458999999999999999999999999999999999987 4799999999986
Q ss_pred Ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 935 NQA-TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
... ..++.+|||+|+..++|++||+||+.|+...+ ..+.++.+++++++++.++|.+..++.+ ..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKML---GVPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 542 23578999999999999999999999987543 2345666778999999999998887764 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
|||+|||||+.+|++|+|||||||||+.++..+.+.|+++.++ |+|+|++||+++ ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68899999999985 78999998
Q ss_pred CC
Q 000506 1093 LG 1094 (1458)
Q Consensus 1093 ~~ 1094 (1458)
..
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 63
No 85
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-38 Score=372.76 Aligned_cols=207 Identities=29% Similarity=0.403 Sum_probs=180.3
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMT 260 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 260 (1458)
.+.+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.+|||+|++.+||++|
T Consensus 16 ~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~t 92 (356)
T PRK11650 16 KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMS 92 (356)
T ss_pred CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCC
Confidence 356999999999999999999999999999999999999998 9999999999876543 467999999999999999
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+||+.|+.+..+.. +.+ ....++.+++.+||++..|..+.+
T Consensus 93 v~eNi~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~---- 134 (356)
T PRK11650 93 VRENMAYGLKIRGMP----------KAE------------------------IEERVAEAARILELEPLLDRKPRE---- 134 (356)
T ss_pred HHHHHHhHHhhcCCC----------HHH------------------------HHHHHHHHHHHcCChhHhhCChhh----
Confidence 999999976543211 000 011345689999999999888876
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
|||||||||+|||||+.+|++|+|||||++||+.++.++.+.|+++.+..+ ++++.++|+..++.+++|+|++|++|+
T Consensus 135 -LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~l~D~i~vl~~G~ 212 (356)
T PRK11650 135 -LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLK-TTSLYVTHDQVEAMTLADRVVVMNGGV 212 (356)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999999876544 556667788899999999999999999
Q ss_pred EEEEcChhhHH
Q 000506 421 IVYQGPREKVL 431 (1458)
Q Consensus 421 iv~~G~~~~~~ 431 (1458)
++..|+++++.
T Consensus 213 i~~~g~~~~~~ 223 (356)
T PRK11650 213 AEQIGTPVEVY 223 (356)
T ss_pred EEEECCHHHHH
Confidence 99999999874
No 86
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.2e-37 Score=367.53 Aligned_cols=215 Identities=25% Similarity=0.383 Sum_probs=188.3
Q ss_pred eEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCee
Q 000506 854 LSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYP 933 (1458)
Q Consensus 854 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1458)
..++++|++..++ ++.+|+|||++|++||++||+|||||||||||++|+|..+ +.+|+|.++|++
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEE
Confidence 3588999998773 3469999999999999999999999999999999999887 478999999998
Q ss_pred CCc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 934 KNQ--ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
... ...++.+||++|++.+++.+||+|++.+.+.++. .+..+..+.++++++.++|.+..++.++ +||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~~-----~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARVS-----DLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCChh-----hCCHH
Confidence 643 2346789999999999999999999987655432 2334445567899999999988888764 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999878999999999986 68889999999985 7999999
Q ss_pred CC
Q 000506 1092 PL 1093 (1458)
Q Consensus 1092 ~~ 1093 (1458)
+.
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 86
No 87
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1e-37 Score=370.38 Aligned_cols=215 Identities=26% Similarity=0.356 Sum_probs=189.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCcee--eEEEECCe
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTE--GDISISGY 932 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~--G~i~i~g~ 932 (1458)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCE
Confidence 478889988773 2469999999999999999999999999999999999887 467 99999998
Q ss_pred eCCc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 933 PKNQ-ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 933 ~~~~-~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
+... ...++.+|||+|+..++|++||+||+.|+...+ ..+.++.+++++++++.++|.+..++.+ +.||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 8643 224578999999999999999999999986543 2345566678999999999999888775 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||||+|||||+.+|++|+|||||||||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999986 68889999999985 79999
Q ss_pred eCCCC
Q 000506 1090 AGPLG 1094 (1458)
Q Consensus 1090 ~G~~~ 1094 (1458)
.|+..
T Consensus 220 ~g~~~ 224 (362)
T TIGR03258 220 HGEPQ 224 (362)
T ss_pred EcCHH
Confidence 99863
No 88
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-38 Score=370.40 Aligned_cols=207 Identities=27% Similarity=0.408 Sum_probs=180.9
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMT 260 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 260 (1458)
+..+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..+||++|
T Consensus 18 ~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~t 94 (351)
T PRK11432 18 SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMS 94 (351)
T ss_pred CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCC
Confidence 356899999999999999999999999999999999999998 9999999999876544 478999999999999999
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+||+.|+.+.++... .+ ....++.+++.+||.+..|..+.+
T Consensus 95 v~eNi~~~l~~~~~~~----------~~------------------------~~~~v~~~l~~~gl~~~~~r~~~~---- 136 (351)
T PRK11432 95 LGENVGYGLKMLGVPK----------EE------------------------RKQRVKEALELVDLAGFEDRYVDQ---- 136 (351)
T ss_pred HHHHHHHHHhHcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhcCChhh----
Confidence 9999999865432210 00 112346688999999988888776
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+..+ ++++.++|+.+++.+++|+|++|++|+
T Consensus 137 -LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~e~~~laD~i~vm~~G~ 214 (351)
T PRK11432 137 -ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFN-ITSLYVTHDQSEAFAVSDTVIVMNKGK 214 (351)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999976544 456667888999999999999999999
Q ss_pred EEEEcChhhHH
Q 000506 421 IVYQGPREKVL 431 (1458)
Q Consensus 421 iv~~G~~~~~~ 431 (1458)
++..|+++++.
T Consensus 215 i~~~g~~~~~~ 225 (351)
T PRK11432 215 IMQIGSPQELY 225 (351)
T ss_pred EEEEcCHHHHH
Confidence 99999999874
No 89
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=8.5e-38 Score=370.99 Aligned_cols=208 Identities=25% Similarity=0.374 Sum_probs=181.3
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcc--cEEEECCeecCCccc-cceEEEecCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLT--GKIKYCGHEFKEFVP-QRTCAYISQNDLHFGE 258 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~--G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~ 258 (1458)
...+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ + |+|.++|+++....+ ++.++||+|++.+||.
T Consensus 17 ~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~ 93 (362)
T TIGR03258 17 ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPH 93 (362)
T ss_pred CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCC
Confidence 346999999999999999999999999999999999999998 8 999999998865443 4679999999999999
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||+||+.|+.+..+... .+ ....++.+++.+||++..|+.+.+
T Consensus 94 ~tv~enl~~~l~~~~~~~----------~~------------------------~~~~v~~~l~~~gL~~~~~~~~~~-- 137 (362)
T TIGR03258 94 LKVEDNVAFGLRAQKMPK----------AD------------------------IAERVADALKLVGLGDAAAHLPAQ-- 137 (362)
T ss_pred CcHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHhcCCCchhhCChhh--
Confidence 999999999865432110 00 011346689999999999988877
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+.+++..++|+|++|++
T Consensus 138 ---LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~ 214 (362)
T TIGR03258 138 ---LSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKD 214 (362)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999998754245667788899999999999999999
Q ss_pred CeEEEEcChhhHH
Q 000506 419 GQIVYQGPREKVL 431 (1458)
Q Consensus 419 G~iv~~G~~~~~~ 431 (1458)
|+++..|+++++.
T Consensus 215 G~i~~~g~~~~~~ 227 (362)
T TIGR03258 215 GRLAAHGEPQALY 227 (362)
T ss_pred CEEEEEcCHHHHH
Confidence 9999999999884
No 90
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=8.7e-38 Score=370.51 Aligned_cols=207 Identities=29% Similarity=0.443 Sum_probs=180.4
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMT 260 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 260 (1458)
.+.+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..+||++|
T Consensus 16 ~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~t 92 (353)
T TIGR03265 16 AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLT 92 (353)
T ss_pred CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCc
Confidence 356999999999999999999999999999999999999998 9999999999876443 467999999999999999
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+||+.|+.+.++.. +.+ ....++.+++.+||++..|+.+.+
T Consensus 93 v~eNi~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~l~L~~~~~~~~~~---- 134 (353)
T TIGR03265 93 VADNIAYGLKNRGMG----------RAE------------------------VAERVAELLDLVGLPGSERKYPGQ---- 134 (353)
T ss_pred HHHHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCCCchhhCChhh----
Confidence 999999976533211 000 112346689999999999888876
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
|||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+..+ ++++.++|+.+++..++|+|++|++|+
T Consensus 135 -LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~-~tvi~vTHd~~ea~~l~d~i~vl~~G~ 212 (353)
T TIGR03265 135 -LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLG-VTTIMVTHDQEEALSMADRIVVMNHGV 212 (353)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999977544 455667788899999999999999999
Q ss_pred EEEEcChhhHH
Q 000506 421 IVYQGPREKVL 431 (1458)
Q Consensus 421 iv~~G~~~~~~ 431 (1458)
+++.|+++++.
T Consensus 213 i~~~g~~~~~~ 223 (353)
T TIGR03265 213 IEQVGTPQEIY 223 (353)
T ss_pred EEEEcCHHHHH
Confidence 99999998874
No 91
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-38 Score=336.09 Aligned_cols=217 Identities=26% Similarity=0.352 Sum_probs=182.0
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++.+|++..++... ...++|+|||++|.+||++||+|+||||||||.++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCccc
Confidence 467888887775321 11259999999999999999999999999999999999987 4899999999876
Q ss_pred Ccc----cccceEEEEccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc-cccccCCCCCC
Q 000506 935 NQA----TFARVSGYCEQNDI--HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLT-NAMVGLPGVDG 1007 (1458)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~--~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~ 1007 (1458)
... .+.+.+.+|+||+. +.|..||++.|.-.... ...++.++ ++.++++.+||.+.. ++. +.+
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~~--~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQQ--RIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHHH--HHHHHHHHcCCCHHHHhcC-----chh
Confidence 543 36688999999985 66999999988765433 23333333 389999999998643 433 458
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1008 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
||||||||++|||||+.+|++|+||||||+||+..+..|+++|.++.++ |.|.|+++||.+ -+..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999765 789999999987 47889999999986 79
Q ss_pred EEEeCCCC
Q 000506 1087 VIYAGPLG 1094 (1458)
Q Consensus 1087 ~~~~G~~~ 1094 (1458)
++..+|.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999863
No 92
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-38 Score=347.93 Aligned_cols=215 Identities=25% Similarity=0.369 Sum_probs=190.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++|++|.++. +..+|+|+|++|++||.++|+|+||||||||+++|+|... +.+|.|.++|.+.
T Consensus 3 ~i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~ 68 (235)
T COG1122 3 MIEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDT 68 (235)
T ss_pred eEEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeec
Confidence 3678899998742 2579999999999999999999999999999999999987 4789999999985
Q ss_pred C----cccccceEEEEccCCCC-CCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 935 N----QATFARVSGYCEQNDIH-SPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 935 ~----~~~~~~~~gyv~Q~~~~-~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
. ...+++.+|||+|++.. +..-||.|.+.|+..- ...+.++.+++++++++.+|+.+.+++.+ ..||
T Consensus 69 ~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n---~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----~~LS 140 (235)
T COG1122 69 SSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN---LGLPREEIEERVAEALELVGLEELLDRPP-----FNLS 140 (235)
T ss_pred cchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhh---cCCCHHHHHHHHHHHHHHcCchhhccCCc-----cccC
Confidence 4 34678899999999864 4577999999998643 34566778899999999999999988764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI 1088 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~ 1088 (1458)
|||||||+||.+|+.+|++|+|||||||||+.+...+++.++++.++ |+|||++|||.. .+.+.+|++++|++ |+++
T Consensus 141 GGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~ 218 (235)
T COG1122 141 GGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKIL 218 (235)
T ss_pred CcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEe
Confidence 99999999999999999999999999999999999999999999877 689999999986 58888999999986 7999
Q ss_pred EeCCC
Q 000506 1089 YAGPL 1093 (1458)
Q Consensus 1089 ~~G~~ 1093 (1458)
+.|++
T Consensus 219 ~~g~p 223 (235)
T COG1122 219 ADGDP 223 (235)
T ss_pred ecCCH
Confidence 99985
No 93
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-37 Score=346.57 Aligned_cols=210 Identities=30% Similarity=0.448 Sum_probs=178.0
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 4677777663 2469999999999999999999999999999999999876 478999999987643
Q ss_pred -ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000506 937 -ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKR 1015 (1458)
Q Consensus 937 -~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1015 (1458)
...++.++|++|++.+++.+||+|++.+..... ....+..++.++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 223467999999999889999999998865332 1233444567889999999988777664 4799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1016 l~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999764 899999999986 57788999999986 6777654
No 94
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=367.93 Aligned_cols=218 Identities=28% Similarity=0.422 Sum_probs=188.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. .+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|++.
T Consensus 2 ~L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 66 (353)
T PRK10851 2 SIEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDV 66 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEC
Confidence 367888887763 2469999999999999999999999999999999999876 4789999999986
Q ss_pred Ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 935 NQA-TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
... ..++.+|||+|++.++|++||+||+.|+...+.. ...+.++.+++++++++.++|.+..++.+ ..|||||
T Consensus 67 ~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq 141 (353)
T PRK10851 67 SRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQ 141 (353)
T ss_pred CCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHH
Confidence 432 2346799999999999999999999997654211 12344556678999999999998888765 4799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||++. ++.+.+|++++|++ |++++.|
T Consensus 142 ~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g 219 (353)
T PRK10851 142 KQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAG 219 (353)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 99999999999999999999999999999999999999999876 899999999986 68889999999985 7999999
Q ss_pred CCC
Q 000506 1092 PLG 1094 (1458)
Q Consensus 1092 ~~~ 1094 (1458)
+..
T Consensus 220 ~~~ 222 (353)
T PRK10851 220 TPD 222 (353)
T ss_pred CHH
Confidence 863
No 95
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.3e-37 Score=347.45 Aligned_cols=208 Identities=25% Similarity=0.349 Sum_probs=176.9
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 567888887631 12359999999999999999999999999999999999876 47899999998753
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 936 QA------TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
.. .+++.++|++|++.+++.+||+||+.+....+ ....++.+++++++++.++|.+..++.+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRII---GVPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 24567999999999999999999999875432 1233444567899999999988777664 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999999877999999999986 57778999999986 54
No 96
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=9.9e-38 Score=365.07 Aligned_cols=202 Identities=27% Similarity=0.401 Sum_probs=178.3
Q ss_pred cceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc--ccccceEEEEccCCCCCCCCC
Q 000506 880 RLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ--ATFARVSGYCEQNDIHSPHVT 957 (1458)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 957 (1458)
++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 3569999999999999999999999999999999999876 478999999987643 234567999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000506 958 VYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1037 (1458)
Q Consensus 958 V~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1037 (1458)
|+|++.+.+.++. .+..+.+++++++++.++|.+..++.++ .|||||||||+||+||+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPVG-----TYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 2334445678999999999988887754 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1038 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1038 LD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999878999999999986 67889999999985 799999875
No 97
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=5.4e-38 Score=318.35 Aligned_cols=201 Identities=25% Similarity=0.406 Sum_probs=174.8
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCCHHHHHH
Q 000506 188 DVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMTVRETMD 266 (1458)
Q Consensus 188 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 266 (1458)
..++.|++||+++|+||||||||||||+|+|+..|. +|+|.+||++.+...+ +|-++.++|+..+|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 467889999999999999999999999999999998 9999999999887665 467999999999999999999998
Q ss_pred HhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCCChHH
Q 000506 267 FSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGVSGGQ 346 (1458)
Q Consensus 267 f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGLSGGq 346 (1458)
++.. ++-+ +.. +.+..++.++...||..+.+.+++. |||||
T Consensus 94 LGl~---P~Lk------L~a-------------------------~~r~~v~~aa~~vGl~~~~~RLP~~-----LSGGq 134 (231)
T COG3840 94 LGLS---PGLK------LNA-------------------------EQREKVEAAAAQVGLAGFLKRLPGE-----LSGGQ 134 (231)
T ss_pred ccCC---cccc------cCH-------------------------HHHHHHHHHHHHhChhhHhhhCccc-----cCchH
Confidence 8642 1111 000 0122456789999999999999988 99999
Q ss_pred HHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEEEEcC
Q 000506 347 KKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIVYQGP 426 (1458)
Q Consensus 347 kkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~~G~ 426 (1458)
||||++||+|+.+-+|++||||+|+||+.-+.++...+.+++.+.+.|+++. +|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmV-TH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMV-THHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEE-eCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 9999999999999999999999999999999999999999998876666555 555678999999999999999999999
Q ss_pred hhhHH
Q 000506 427 REKVL 431 (1458)
Q Consensus 427 ~~~~~ 431 (1458)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98865
No 98
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.9e-38 Score=318.64 Aligned_cols=196 Identities=26% Similarity=0.372 Sum_probs=174.1
Q ss_pred cceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc-ccccceEEEEccCCCCCCCCCHHHHHHH
Q 000506 886 DVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ-ATFARVSGYCEQNDIHSPHVTVYESLLF 964 (1458)
Q Consensus 886 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTV~e~l~f 964 (1458)
..++.|.+||++||+||||||||||||.|+|... +.+|+|.|||++... ....|-++.++|+.++|.++||.+|+.+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 4678899999999999999999999999999987 479999999998754 3456789999999999999999999988
Q ss_pred HHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000506 965 SAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1044 (1458)
Q Consensus 965 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1044 (1458)
+..-. .... .+.+++++.++..+||..+.+++.+ +|||||||||++||+|+++-+|++||||+|.||+.-+.
T Consensus 95 Gl~P~--LkL~-a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPG--LKLN-AEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCcc--cccC-HHHHHHHHHHHHHhChhhHhhhCcc-----ccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 74321 1222 3455679999999999999988754 79999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1045 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1045 ~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
++..++.+++++ +.|++++||+|+ +.....|+++++++ |++.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 999999999865 899999999997 79999999999986 799999985
No 99
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-37 Score=345.76 Aligned_cols=215 Identities=26% Similarity=0.395 Sum_probs=181.0
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc
Confidence 467777766310 011469999999999999999999999999999999999876 478999999987642
Q ss_pred ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHH
Q 000506 937 ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRL 1016 (1458)
Q Consensus 937 ~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl 1016 (1458)
.++.++|++|++.+++.+||+|++.+....+ ....+...+.++++++.++|.+..++.+ ..||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQ---GVPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 4567999999999889999999998875433 1233444567899999999988777664 47999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEec-CcEEEEeCCC
Q 000506 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKR-GGQVIYAGPL 1093 (1458)
Q Consensus 1017 ~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~~-gG~~~~~G~~ 1093 (1458)
+||+||+.+|++|+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ .|+++..+++
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999865 4899999999986 57788999999985 4899888765
No 100
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-37 Score=369.81 Aligned_cols=218 Identities=28% Similarity=0.386 Sum_probs=185.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCCH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMTV 261 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 261 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++....+ ++.++||+|++.+||++||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 45999999999999999999999999999999999999998 9999999999876543 4679999999999999999
Q ss_pred HHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCC
Q 000506 262 RETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRG 341 (1458)
Q Consensus 262 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 341 (1458)
+||+.|+.+.++... .+ ....++.+++.+||++..|..+..
T Consensus 104 ~eNi~~~l~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~p~~----- 144 (375)
T PRK09452 104 FENVAFGLRMQKTPA----------AE------------------------ITPRVMEALRMVQLEEFAQRKPHQ----- 144 (375)
T ss_pred HHHHHHHHhhcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhhCChhh-----
Confidence 999999765332110 00 011345688999999999888876
Q ss_pred CChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeE
Q 000506 342 VSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQI 421 (1458)
Q Consensus 342 LSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~i 421 (1458)
|||||||||+|||||+.+|++||||||++|||..++.++.+.|+++.+..+ ++++.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g-~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLG-ITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999987544 5566678889999999999999999999
Q ss_pred EEEcChhhHHHHHHhcCCCCCCCCCHHHHH
Q 000506 422 VYQGPREKVLEFFEYMGFKCPDRKGVADFL 451 (1458)
Q Consensus 422 v~~G~~~~~~~~F~~~G~~~p~~~~~ad~l 451 (1458)
+..|+++++. ..|....+++|+
T Consensus 224 ~~~g~~~~i~--------~~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIY--------EEPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHH--------hCcccHHHHHhc
Confidence 9999998873 345544455544
No 101
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3.1e-37 Score=367.35 Aligned_cols=215 Identities=24% Similarity=0.365 Sum_probs=189.1
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478999988773 2468999999999999999999999999999999999887 4789999999986
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 935 NQ-ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
.. ...++.+|||+|++.++|++||+||+.|+...+ ..+..+.+++++++++.++|.+..++.+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 43 223578999999999999999999999986533 2344555677899999999999888775 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
|||+|||||+.+|++|+|||||||||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999865 999999999986 68899999999985 79999998
Q ss_pred CC
Q 000506 1093 LG 1094 (1458)
Q Consensus 1093 ~~ 1094 (1458)
..
T Consensus 229 ~~ 230 (375)
T PRK09452 229 PR 230 (375)
T ss_pred HH
Confidence 63
No 102
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.3e-37 Score=360.85 Aligned_cols=214 Identities=26% Similarity=0.395 Sum_probs=184.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. ++.+|+|||++|++||++||+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478899988763 2469999999999999999999999999999999999876 4789999999876
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 935 NQ--ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 935 ~~--~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
.. ...++.+||++|++.+++.+||+|++.+.+... ..+.++..+.++++++.++|.+..++.++ .|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~l~~~~~~~~~-----~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADVRVA-----LLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCchh-----hCCHHH
Confidence 32 234567999999999999999999998755432 12334445567889999999988877754 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
|||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 67789999999985 78999987
Q ss_pred C
Q 000506 1093 L 1093 (1458)
Q Consensus 1093 ~ 1093 (1458)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 103
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-37 Score=343.22 Aligned_cols=209 Identities=25% Similarity=0.440 Sum_probs=178.6
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|++...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 4677777652 2459999999999999999999999999999999999876 479999999987643
Q ss_pred ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHH
Q 000506 937 ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRL 1016 (1458)
Q Consensus 937 ~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl 1016 (1458)
..++.++|++|++.+++.+||+|++.+....+. ....+.++.++++++.+++.+..++.+ ..||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHH
Confidence 345679999999999999999999988654432 233444567889999999988777654 47999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1017 ~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999877899999999986 57788999999985 6777654
No 104
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.5e-37 Score=361.32 Aligned_cols=207 Identities=29% Similarity=0.415 Sum_probs=178.8
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc--ccceEEEecCCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV--PQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 259 (1458)
.+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+
T Consensus 19 ~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~ 95 (306)
T PRK13537 19 DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDF 95 (306)
T ss_pred CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCC
Confidence 356999999999999999999999999999999999999998 999999999876432 346799999999999999
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||+||+.|.++..+.... + ....++.+++.+||.+..++.++.
T Consensus 96 tv~e~l~~~~~~~~~~~~-----~-----------------------------~~~~~~~~l~~~~l~~~~~~~~~~--- 138 (306)
T PRK13537 96 TVRENLLVFGRYFGLSAA-----A-----------------------------ARALVPPLLEFAKLENKADAKVGE--- 138 (306)
T ss_pred cHHHHHHHHHHHcCCCHH-----H-----------------------------HHHHHHHHHHHcCCchHhcCchhh---
Confidence 999999986654332100 0 011235578899999999998876
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ . +++|+.++|..+++.++||+|++|++|
T Consensus 139 --LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~d~i~il~~G 214 (306)
T PRK13537 139 --LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVIEEG 214 (306)
T ss_pred --CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999965 2 456666778899999999999999999
Q ss_pred eEEEEcChhhHHH
Q 000506 420 QIVYQGPREKVLE 432 (1458)
Q Consensus 420 ~iv~~G~~~~~~~ 432 (1458)
++++.|+++++.+
T Consensus 215 ~i~~~g~~~~l~~ 227 (306)
T PRK13537 215 RKIAEGAPHALIE 227 (306)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998754
No 105
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-37 Score=344.80 Aligned_cols=212 Identities=28% Similarity=0.396 Sum_probs=181.3
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.+. ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCc
Confidence 5677777663 2469999999999999999999999999999999999876 478999999987532
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 937 --ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
...++.++|++|++.+++.+||+|++.+....+ ..+.++.++.++++++.++|.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLY---GVPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHH
Confidence 234567999999999999999999998875443 1233344567899999999988777765 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
|++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999999999999999999999999999876 899999999986 57788999999985 788888764
No 106
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.8e-37 Score=364.19 Aligned_cols=209 Identities=24% Similarity=0.351 Sum_probs=181.2
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-------cceEEEecCCC
Q 000506 181 RKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-------QRTCAYISQND 253 (1458)
Q Consensus 181 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 253 (1458)
+.+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~ 80 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQF 80 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCC
Confidence 3456999999999999999999999999999999999999998 9999999999876543 46799999999
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTM 333 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 333 (1458)
.++|++||+||+.|+.+..+... .+ ....+..+++.+||++..++.
T Consensus 81 ~l~~~~TV~eNi~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~vgL~~~~~~~ 126 (363)
T TIGR01186 81 ALFPHMTILQNTSLGPELLGWPE----------QE------------------------RKEKALELLKLVGLEEYEHRY 126 (363)
T ss_pred cCCCCCCHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHhcCCchhhhCC
Confidence 99999999999999765433210 00 011345578999999888888
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEE
Q 000506 334 VGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNI 413 (1458)
Q Consensus 334 vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v 413 (1458)
+++ |||||||||+|||||+.+|++|||||||+|||+.++.++.+.++++.+..+ .+|+.++|+.+++.+++|+|
T Consensus 127 p~~-----LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~-~Tii~vTHd~~ea~~~~drI 200 (363)
T TIGR01186 127 PDE-----LSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQ-KTIVFITHDLDEAIRIGDRI 200 (363)
T ss_pred hhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEE
Confidence 887 999999999999999999999999999999999999999999999976444 45666788899999999999
Q ss_pred EEEcCCeEEEEcChhhHHH
Q 000506 414 ILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 414 ~lL~~G~iv~~G~~~~~~~ 432 (1458)
++|++|+++..|+++++..
T Consensus 201 ~vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 201 VIMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEEeCCEEEeeCCHHHHHh
Confidence 9999999999999988753
No 107
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=4.1e-37 Score=342.56 Aligned_cols=210 Identities=28% Similarity=0.415 Sum_probs=178.8
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 5677877663 2469999999999999999999999999999999999876 478999999987643
Q ss_pred c-cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000506 937 A-TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKR 1015 (1458)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1015 (1458)
. ..++.++|++|++.+++..||+||+.+....+ ....++.++.++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHH
Confidence 2 23467999999999888999999998865432 1233444567889999999988777765 4799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1016 l~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
++||++|+.+|++++|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999864 899999999986 57788999999985 7887765
No 108
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=4.3e-37 Score=361.93 Aligned_cols=206 Identities=26% Similarity=0.338 Sum_probs=178.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc------cceEEEecCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP------QRTCAYISQNDLHF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 256 (1458)
+++|+|||++|++||+++|+||||||||||+++|+|+.+|+ +|+|.++|+++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999999876432 45799999999999
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
+.+||+||+.|..+..+... .+ ....+..+++.+||++..|..+++
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------~~------------------------~~~~v~e~l~~vgL~~~~~~~~~~ 140 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------DE------------------------IKRKVTELLALVGLGDKHDSYPSN 140 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhhCChhh
Confidence 99999999998655332110 00 011245688999999988888876
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+ .+|+.++|+.+.+.++||+|++|
T Consensus 141 -----LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g-~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLG-LTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999987545 45566778899999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000506 417 SEGQIVYQGPREKVL 431 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~~ 431 (1458)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 109
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.7e-38 Score=325.67 Aligned_cols=214 Identities=23% Similarity=0.361 Sum_probs=184.2
Q ss_pred ccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcccc----ceEEEecCC
Q 000506 177 PSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQ----RTCAYISQN 252 (1458)
Q Consensus 177 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~ 252 (1458)
.++.+++++++|||+.+++||+++|+|||||||||.+.++.|+.+|+ +|+|.++|.+++.+... .-+||+||+
T Consensus 11 ~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE 87 (243)
T COG1137 11 AKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQE 87 (243)
T ss_pred hHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCccccccc
Confidence 34556778999999999999999999999999999999999999999 99999999999987643 348999999
Q ss_pred CCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccc
Q 000506 253 DLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADT 332 (1458)
Q Consensus 253 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 332 (1458)
+..|..+||+|||.-....+.... .+ .+.+...+.+|+.|+|.|++|.
T Consensus 88 ~SIFr~LtV~dNi~~vlE~~~~d~--------~~------------------------~~~~~~l~~LL~ef~i~hlr~~ 135 (243)
T COG1137 88 ASIFRKLTVEDNIMAVLEIREKDL--------KK------------------------AERKEELDALLEEFHITHLRDS 135 (243)
T ss_pred chHhhcCcHHHHHHHHHhhhhcch--------hH------------------------HHHHHHHHHHHHHhchHHHhcC
Confidence 999999999999987654432100 00 0122345678999999999998
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
+-.. ||||||+|+.|||||+.+|+.++||||++|.||.+..+|.+.++.+.+. + .-|++.-|+..|+...+||
T Consensus 136 ~a~s-----LSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~r-g-iGvLITDHNVREtL~i~dR 208 (243)
T COG1137 136 KAYS-----LSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDR-G-IGVLITDHNVRETLDICDR 208 (243)
T ss_pred cccc-----cccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhC-C-ceEEEccccHHHHHhhhhe
Confidence 8666 9999999999999999999999999999999999999999999999863 4 4455567889999999999
Q ss_pred EEEEcCCeEEEEcChhhHHH
Q 000506 413 IILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~~ 432 (1458)
.+++++|++..+|+++++.+
T Consensus 209 aYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 209 AYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred EEEEecCeEEecCCHHHHhc
Confidence 99999999999999999864
No 110
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-37 Score=365.09 Aligned_cols=215 Identities=26% Similarity=0.393 Sum_probs=188.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++..+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 588999987763 2468999999999999999999999999999999999987 4789999999986
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 935 NQ-ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
.. ...+|.+|||+|++.++|++||.||+.|+...+ ..+.++.+++++++++.++|.+..++.+ .+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 43 234678999999999999999999999976543 2345566678999999999998888764 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
|||+|||||+.+|++|+|||||+|||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998654 899999999986 68899999999985 79999998
Q ss_pred CC
Q 000506 1093 LG 1094 (1458)
Q Consensus 1093 ~~ 1094 (1458)
+.
T Consensus 234 ~~ 235 (377)
T PRK11607 234 PE 235 (377)
T ss_pred HH
Confidence 63
No 111
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.8e-37 Score=347.54 Aligned_cols=215 Identities=27% Similarity=0.384 Sum_probs=180.6
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4667776653 2459999999999999999999999999999999999876 478999999987643
Q ss_pred c---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCC-------CCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000506 937 A---T-FARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSD-------IDSKTRKMFVDEVMDLVELEPLTNAMVGLPGV 1005 (1458)
Q Consensus 937 ~---~-~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1458)
. . .++.++|++|++.+++.+||+|++.+....+.... ...++..+.++++++.+++.+..++.+
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 2 1 23569999999999999999999988754322110 113344567889999999988777654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 479999999999999999999999999999999999999999999999878999999999986 57788999999985 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 88888875
No 112
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-37 Score=344.59 Aligned_cols=207 Identities=27% Similarity=0.386 Sum_probs=181.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecC----CccccceEEEecCCC-CCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFK----EFVPQRTCAYISQND-LHFG 257 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 257 (1458)
..+|+|+|+.+++||.++|+||||||||||+++|+|+++|. +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999998 899999999876 233468899999995 4566
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCc
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQ 337 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 337 (1458)
..||.|.++|+.+..+.... + ...+++.+++.+||.+.+|..+-+
T Consensus 94 ~~tV~~evafg~~n~g~~~~-----e-----------------------------~~~rv~~~l~~vgl~~~~~r~p~~- 138 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPRE-----E-----------------------------IEERVAEALELVGLEELLDRPPFN- 138 (235)
T ss_pred cCcHHHHHhhchhhcCCCHH-----H-----------------------------HHHHHHHHHHHcCchhhccCCccc-
Confidence 77999999999887664321 0 122456789999999999988877
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
|||||||||+||.+|+.+|++|+|||||+|||+..+.++++.++++.+. ++.+++.++|+.+.+.+++|++++|+
T Consensus 139 ----LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 139 ----LSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred ----cCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999875 34566678899999999999999999
Q ss_pred CCeEEEEcChhhHHH
Q 000506 418 EGQIVYQGPREKVLE 432 (1458)
Q Consensus 418 ~G~iv~~G~~~~~~~ 432 (1458)
+|+++++|+++++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999887754
No 113
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-37 Score=364.36 Aligned_cols=217 Identities=23% Similarity=0.321 Sum_probs=185.6
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|++++++.. .+.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5788998877410 113569999999999999999999999999999999999986 47899999999864
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 936 QA------TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
.. ..++.+||++|++.+++.+||+||+.+....+ ..+.++.+++++++++.+||.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23567999999999999999999999875443 2234445567899999999988877764 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI 1088 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~ 1088 (1458)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 57788999999985 7899
Q ss_pred EeCCC
Q 000506 1089 YAGPL 1093 (1458)
Q Consensus 1089 ~~G~~ 1093 (1458)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 98875
No 114
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-37 Score=346.75 Aligned_cols=217 Identities=28% Similarity=0.411 Sum_probs=182.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 467889888763 2469999999999999999999999999999999999876 4789999999876
Q ss_pred Ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 935 NQA-TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
... ..++.++|++|++.+++.+||+|++.+....+.. .....++..+.++++++.++|.+..++.+ ..|||||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHH
Confidence 432 2246799999999998999999999886543211 00122334456889999999987777664 4799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 219 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVG 219 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEec
Confidence 99999999999999999999999999999999999999999875 899999999986 57788999999985 7898888
Q ss_pred CC
Q 000506 1092 PL 1093 (1458)
Q Consensus 1092 ~~ 1093 (1458)
+.
T Consensus 220 ~~ 221 (239)
T cd03296 220 TP 221 (239)
T ss_pred CH
Confidence 75
No 115
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4.8e-37 Score=343.33 Aligned_cols=215 Identities=27% Similarity=0.430 Sum_probs=181.2
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++.. .+...+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|++..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 5678888776311 011269999999999999999999999999999999999876 47899999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 936 Q--ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
. ..+++.++|++|++.+++.+||+||+.+....+ ....++..+.++++++.+++.+..+..+ ..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 234578999999999899999999998765433 2234445567899999999988777664 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999877999999999986 57788999999986 6777654
No 116
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.1e-37 Score=363.88 Aligned_cols=204 Identities=25% Similarity=0.332 Sum_probs=180.2
Q ss_pred ccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc---cc----cceEEEEccCCC
Q 000506 879 DRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA---TF----ARVSGYCEQNDI 951 (1458)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~Q~~~ 951 (1458)
+.+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... .+ ++.+|||+|++.
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 34669999999999999999999999999999999999987 4899999999986532 22 568999999999
Q ss_pred CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000506 952 HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFM 1031 (1458)
Q Consensus 952 ~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1031 (1458)
++|++||+||+.|...+. ..+.+++.+++.++++.+||.+..++.+ ..|||||||||+|||||+.+|+||+|
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999976543 2345666778999999999988877765 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1032 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1032 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
||||+|||+.++..+++.++++.++ |+|||++||++. ++.+.+|++++|++ |+++..|+..
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~ 215 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPD 215 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHH
Confidence 9999999999999999999999765 899999999986 57889999999985 7999999753
No 117
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-37 Score=366.14 Aligned_cols=215 Identities=27% Similarity=0.397 Sum_probs=186.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 377889988763 2469999999999999999999999999999999999876 4789999999986
Q ss_pred Ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 935 NQA-TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
... ..++.+|||+|+..+++.+||+||+.|....+ ..+.++.+++++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA---GAKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 432 23467999999999999999999999876543 2234455667899999999998887765 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++.+.+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68889999999985 79999988
Q ss_pred CC
Q 000506 1093 LG 1094 (1458)
Q Consensus 1093 ~~ 1094 (1458)
..
T Consensus 218 ~~ 219 (369)
T PRK11000 218 PL 219 (369)
T ss_pred HH
Confidence 53
No 118
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4.5e-37 Score=367.75 Aligned_cols=229 Identities=27% Similarity=0.359 Sum_probs=190.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|++.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 377889888763 3569999999999999999999999999999999999876 4789999999876
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
.. ...++.+|||+|++.+++.+||+|++.++...... .....++.+++++++++.+++.+..++.+ +.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 43 34567899999999998999999999886432110 01112334567899999999998888765 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
|||||+.|||||+++|++|+|||||+|||+.++..++++|++++++|+|||+++|+++ ++.+.||++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57889999999985 789999
Q ss_pred CCCCc--chHHHHHHHH
Q 000506 1091 GPLGR--QSQKLVEYFE 1105 (1458)
Q Consensus 1091 G~~~~--~~~~~~~~f~ 1105 (1458)
|+..+ ..+.+.+-|.
T Consensus 221 G~~~ev~~~~~l~~~~~ 237 (402)
T PRK09536 221 GPPADVLTADTLRAAFD 237 (402)
T ss_pred cCHHHHhCcHHHHHHhC
Confidence 98642 1223555553
No 119
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-38 Score=335.02 Aligned_cols=226 Identities=26% Similarity=0.366 Sum_probs=190.4
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcccc----ceEEEecC
Q 000506 176 LPSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQ----RTCAYISQ 251 (1458)
Q Consensus 176 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q 251 (1458)
+.++-+...+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ .-++--+|
T Consensus 10 l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ 86 (250)
T COG0411 10 LSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQ 86 (250)
T ss_pred ceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeecc
Confidence 345567788999999999999999999999999999999999999998 99999999999887764 34788899
Q ss_pred CCCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccc
Q 000506 252 NDLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICAD 331 (1458)
Q Consensus 252 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d 331 (1458)
+..+|++|||.||+..++..+.. ....-...+-. .+ ..+.......+|+.+||.+.+|
T Consensus 87 ~~rlF~~lTVlENv~va~~~~~~---~~~~l~~~~~~--------~~-----------e~~~~e~A~~~Le~vgL~~~a~ 144 (250)
T COG0411 87 ITRLFPGLTVLENVAVGAHARLG---LSGLLGRPRAR--------KE-----------EREARERARELLEFVGLGELAD 144 (250)
T ss_pred cccccCCCcHHHHHHHHhhhhhh---hhhhhccccch--------hh-----------HHHHHHHHHHHHHHcCCchhhc
Confidence 99999999999999988664421 00000000000 00 0111223466899999999999
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+..|+ ||+|||||+.|||||+++|++|+||||.+||.+..+.++.+.++++.+. ++++|+.+-|++.-++++||
T Consensus 145 ~~A~~-----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~-~g~tillIEHdM~~Vm~l~d 218 (250)
T COG0411 145 RPAGN-----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDR-GGVTILLIEHDMKLVMGLAD 218 (250)
T ss_pred chhhc-----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhc-CCcEEEEEEeccHHHhhhcc
Confidence 99999 9999999999999999999999999999999999999999999999874 45777788999999999999
Q ss_pred EEEEEcCCeEEEEcChhhHHH
Q 000506 412 NIILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~~ 432 (1458)
||+||+.|+++.+|+++++.+
T Consensus 219 ri~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 219 RIVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred EEEeccCCcCcccCCHHHHhc
Confidence 999999999999999999864
No 120
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=6.5e-37 Score=345.61 Aligned_cols=212 Identities=24% Similarity=0.351 Sum_probs=180.7
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 4677777663 2469999999999999999999999999999999999876 478999999987532
Q ss_pred c---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 937 A---T-FARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 937 ~---~-~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
. . .++.++|++|++.+++.+||+|++.+....+. ...++..+.++++++.+++.+..++.+ ..|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHH
Confidence 1 1 23569999999999999999999987643321 223344557889999999988777664 4799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999999877999999999986 68889999999985 78888887
Q ss_pred C
Q 000506 1093 L 1093 (1458)
Q Consensus 1093 ~ 1093 (1458)
.
T Consensus 217 ~ 217 (232)
T cd03218 217 P 217 (232)
T ss_pred H
Confidence 5
No 121
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.8e-37 Score=357.61 Aligned_cols=213 Identities=24% Similarity=0.399 Sum_probs=185.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++|+++.+. ++.+|+|+|+++++||++||+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~ 66 (301)
T TIGR03522 2 SIRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDV 66 (301)
T ss_pred EEEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEc
Confidence 367888887763 2469999999999999999999999999999999999876 4799999999876
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 935 NQ--ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 935 ~~--~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
.. ...++.+||++|++.+++.+||.|++.+.+.++. .+.++..++++++++.+||.+..++.++ .|||||
T Consensus 67 ~~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~ 138 (301)
T TIGR03522 67 LQNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKIG-----QLSKGY 138 (301)
T ss_pred ccChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCchh-----hCCHHH
Confidence 43 2345689999999999999999999998765542 2334445678999999999988887754 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
|||++||+||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 139 ~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~ 215 (301)
T TIGR03522 139 RQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKK 215 (301)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999864 799999999986 68889999999985 79999998
Q ss_pred C
Q 000506 1093 L 1093 (1458)
Q Consensus 1093 ~ 1093 (1458)
.
T Consensus 216 ~ 216 (301)
T TIGR03522 216 L 216 (301)
T ss_pred H
Confidence 6
No 122
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-37 Score=345.45 Aligned_cols=208 Identities=27% Similarity=0.369 Sum_probs=174.4
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQNDLH 255 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~ 255 (1458)
.+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++||+|++.+
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~ 88 (235)
T cd03261 12 GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGAL 88 (235)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCccc
Confidence 346999999999999999999999999999999999999987 999999999876432 24579999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
++.+||+||+.+..+...... +.+ ....++.+++.+||++..++.++
T Consensus 89 ~~~~tv~~~l~~~~~~~~~~~---------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~ 135 (235)
T cd03261 89 FDSLTVFENVAFPLREHTRLS---------EEE------------------------IREIVLEKLEAVGLRGAEDLYPA 135 (235)
T ss_pred CCCCcHHHHHHHHHhhccCCC---------HHH------------------------HHHHHHHHHHHcCCchhhcCChh
Confidence 999999999988643211000 000 01123557889999888888887
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++
T Consensus 136 ~-----LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~vsH~~~~~~~~~d~v~~ 209 (235)
T cd03261 136 E-----LSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELG-LTSIMVTHDLDTAFAIADRIAV 209 (235)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEecCHHHHHHhcCEEEE
Confidence 6 999999999999999999999999999999999999999999999876434 4566677888899999999999
Q ss_pred EcCCeEEEEcChhhHH
Q 000506 416 LSEGQIVYQGPREKVL 431 (1458)
Q Consensus 416 L~~G~iv~~G~~~~~~ 431 (1458)
|++|++++.|+++++.
T Consensus 210 l~~G~i~~~g~~~~~~ 225 (235)
T cd03261 210 LYDGKIVAEGTPEELR 225 (235)
T ss_pred EECCeEEEecCHHHHc
Confidence 9999999999987753
No 123
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=7.4e-37 Score=362.58 Aligned_cols=210 Identities=29% Similarity=0.444 Sum_probs=179.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCCH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMTV 261 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 261 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++....+ ++.++||+|++.++|.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 46999999999999999999999999999999999999998 9999999998865433 3679999999999999999
Q ss_pred HHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCC
Q 000506 262 RETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRG 341 (1458)
Q Consensus 262 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 341 (1458)
+||+.|+.+....... ..+.+ ....++.+++.+||++..|+.+.+
T Consensus 92 ~eni~~~~~~~~~~~~------~~~~~------------------------~~~~~~~~l~~~~L~~~~~~~~~~----- 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER------PNAAA------------------------IKAKVTQLLEMVQLAHLADRYPAQ----- 136 (353)
T ss_pred HHHHHhhhhhcccccC------CCHHH------------------------HHHHHHHHHHHcCCchhhhCChhh-----
Confidence 9999997653210000 00000 011345689999999888888876
Q ss_pred CChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeE
Q 000506 342 VSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQI 421 (1458)
Q Consensus 342 LSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~i 421 (1458)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+ .+++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g-~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELK-FTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999976434 5566788899999999999999999999
Q ss_pred EEEcChhhHH
Q 000506 422 VYQGPREKVL 431 (1458)
Q Consensus 422 v~~G~~~~~~ 431 (1458)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 124
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-37 Score=365.22 Aligned_cols=206 Identities=26% Similarity=0.340 Sum_probs=179.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCCH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMTV 261 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 261 (1458)
..+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.+|||+|++.+||++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 46999999999999999999999999999999999999998 9999999998865443 5679999999999999999
Q ss_pred HHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCC
Q 000506 262 RETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRG 341 (1458)
Q Consensus 262 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 341 (1458)
.||+.|+.+.++... .+ ....++.+++.+||.+..|..+..
T Consensus 109 ~eNi~~~l~~~~~~~----------~~------------------------~~~~v~~~l~~l~L~~~~~~~~~~----- 149 (377)
T PRK11607 109 EQNIAFGLKQDKLPK----------AE------------------------IASRVNEMLGLVHMQEFAKRKPHQ----- 149 (377)
T ss_pred HHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhcCChhh-----
Confidence 999999765432110 00 011345688999999888888776
Q ss_pred CChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeE
Q 000506 342 VSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQI 421 (1458)
Q Consensus 342 LSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~i 421 (1458)
|||||||||+|||||+.+|++|||||||++||..++.++.+.|+++.+..+ .+++.++|+.+++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVG-VTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999999876555 5566678889999999999999999999
Q ss_pred EEEcChhhHH
Q 000506 422 VYQGPREKVL 431 (1458)
Q Consensus 422 v~~G~~~~~~ 431 (1458)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 125
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=6.5e-37 Score=344.38 Aligned_cols=213 Identities=24% Similarity=0.314 Sum_probs=178.1
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCc-----CCCceeeEEEECC
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYTEGDISISG 931 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~-----~~~~~~G~i~i~g 931 (1458)
+++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|.. + +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 4677777652 246999999999999999999999999999999999987 4 5789999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
++... ...++.+||++|++.++ .+||+||+.+....+. ....++.+++++++++.+++.+..+.... +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87532 23456799999999887 7999999988654331 11222245678899999999877665431 25
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|+++ ++.+.||++++|++ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 79999999999999999999999999999999999999999999999877 99999999986 57788999999985 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
+++.|+.
T Consensus 218 i~~~g~~ 224 (227)
T cd03260 218 LVEFGPT 224 (227)
T ss_pred EEEecCc
Confidence 9888875
No 126
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.2e-36 Score=341.75 Aligned_cols=221 Identities=36% Similarity=0.629 Sum_probs=182.6
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC-CceeeEEEECCeeC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYTEGDISISGYPK 934 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~-~~~~G~i~i~g~~~ 934 (1458)
+.|+|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 5678888776421 0135799999999999999999999999999999999998751 23789999999987
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHH-HHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 935 NQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDE-VMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
.....++.++|++|++.+++.+||+||+.+......+.....+.....+++ .++.+++.+..++.+ +.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV-----KGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc-----cCcCHHHH
Confidence 554567789999999999999999999998765443222222223334555 899999987776654 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999999877999999999985468899999999985 7888765
No 127
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=6.3e-37 Score=339.77 Aligned_cols=206 Identities=30% Similarity=0.431 Sum_probs=176.1
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 4677777653 2469999999999999999999999999999999999876 479999999987543
Q ss_pred -ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000506 937 -ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKR 1015 (1458)
Q Consensus 937 -~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1015 (1458)
...++.++|++|++.+++..||+|++.+....+. . .++.++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHH
Confidence 2345679999999998999999999988654321 1 1345788999999988777664 4799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1016 l~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999878999999999986 57778999999985 7887654
No 128
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.5e-37 Score=314.78 Aligned_cols=200 Identities=27% Similarity=0.394 Sum_probs=177.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQNDLHF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 256 (1458)
.++|+|||+.|++||++.|+||||||||||||+|.+...|+ .|+|.+||+++.... .||+||+|+||.-+.
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 55999999999999999999999999999999999999998 999999999987653 268899999999999
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
++.||.||++|+.+..|...+ + .+..+..+|+..||.+.++..+-.
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~~-----~-----------------------------i~~rV~~~L~~VgL~~k~~~lP~~ 137 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPPR-----E-----------------------------IRRRVSEVLDLVGLKHKARALPSQ 137 (223)
T ss_pred ccchHhhhhhhhhhccCCCHH-----H-----------------------------HHHHHHHHHHHhccchhhhcCccc
Confidence 999999999999887654211 1 122456689999999999888776
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+||||++.+|++|+-||||-+||+.++.+|++.+.++.+ .+|+|++.+|+..-+..+-.+++.|
T Consensus 138 -----LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 138 -----LSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred -----cCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEE
Confidence 999999999999999999999999999999999999999999999976 3577777889998898999999999
Q ss_pred cCCeEEEEcC
Q 000506 417 SEGQIVYQGP 426 (1458)
Q Consensus 417 ~~G~iv~~G~ 426 (1458)
++|+++.+..
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999987653
No 129
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-37 Score=325.94 Aligned_cols=211 Identities=28% Similarity=0.384 Sum_probs=178.7
Q ss_pred cccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcccc----ceEEEecCCC
Q 000506 178 SKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQ----RTCAYISQND 253 (1458)
Q Consensus 178 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d 253 (1458)
..+++.+||++||+++++||+++|+||||+||||||++|+|..++. +|+|.++|++++...++ .-++||||..
T Consensus 11 ~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR 87 (237)
T COG0410 11 AGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGR 87 (237)
T ss_pred ecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccc
Confidence 3456688999999999999999999999999999999999999987 99999999999887653 5699999999
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcC-Ccccccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLG-LDICADT 332 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lg-L~~~~dt 332 (1458)
..||.|||+|||..++..+... +.. .. ..|.+.+.|= |.+.++.
T Consensus 88 ~iF~~LTVeENL~~g~~~~~~~-----------~~~------~~------------------~~e~v~~lFP~Lker~~~ 132 (237)
T COG0410 88 RIFPRLTVEENLLLGAYARRDK-----------EAQ------ER------------------DLEEVYELFPRLKERRNQ 132 (237)
T ss_pred cchhhCcHHHHHhhhhhccccc-----------ccc------cc------------------cHHHHHHHChhHHHHhcC
Confidence 9999999999999875432110 000 00 0223344432 5556677
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
+-|+ |||||||-++|||||+++|++|+|||||.||-|.-..+|.+.++++.+.. +.+|+.+.|+...+.+++||
T Consensus 133 ~aG~-----LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~-g~tIlLVEQn~~~Al~iaDr 206 (237)
T COG0410 133 RAGT-----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEG-GMTILLVEQNARFALEIADR 206 (237)
T ss_pred cccC-----CChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcC-CcEEEEEeccHHHHHHhhCE
Confidence 7777 99999999999999999999999999999999999999999999998753 46788899999999999999
Q ss_pred EEEEcCCeEEEEcChhhHHH
Q 000506 413 IILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~~ 432 (1458)
.++|.+|++++.|+.+++..
T Consensus 207 ~yvle~Griv~~G~~~eL~~ 226 (237)
T COG0410 207 GYVLENGRIVLSGTAAELLA 226 (237)
T ss_pred EEEEeCCEEEEecCHHHHhc
Confidence 99999999999999998853
No 130
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=7.5e-37 Score=341.74 Aligned_cols=208 Identities=28% Similarity=0.421 Sum_probs=173.8
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~ 70 (218)
T cd03255 2 ELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISK 70 (218)
T ss_pred eEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhh
Confidence 567887766310 011469999999999999999999999999999999999876 478999999987643
Q ss_pred cc-------ccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 937 AT-------FARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 937 ~~-------~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
.. .++.++|++|++.+++.+||+|++.+....+. ....+.++.++++++.+||.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (218)
T cd03255 71 LSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELS 142 (218)
T ss_pred cchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcC
Confidence 11 24579999999999999999999998765432 223344567889999999988777654 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++ +.||++++|++ |+
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 143 GGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRD-GK 217 (218)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeC-Cc
Confidence 9999999999999999999999999999999999999999999987 5899999999986 35 48999999986 44
No 131
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-37 Score=347.05 Aligned_cols=216 Identities=29% Similarity=0.363 Sum_probs=178.8
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.+.. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYPN------------GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecCC------------ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccc
Confidence 46777766531 1469999999999999999999999999999999999876 478999999987643
Q ss_pred c------cccceEEEEccCCCCCCCCCHHHHHHHHHhhhc-----CCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000506 937 A------TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRL-----SSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGV 1005 (1458)
Q Consensus 937 ~------~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1458)
. ..++.++|++|++.+++.+||+||+.+...... ......+...+.++++++.++|.+..++.+
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA----- 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc-----
Confidence 1 245679999999999999999999987532110 001112234456889999999987766654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999999764 899999999986 57779999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 221 G~i~~~~~~ 229 (241)
T cd03256 221 GRIVFDGPP 229 (241)
T ss_pred CEEEeecCH
Confidence 789988875
No 132
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=343.74 Aligned_cols=217 Identities=26% Similarity=0.351 Sum_probs=182.4
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++.. .+.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|++..
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4677887766310 001269999999999999999999999999999999999986 47899999999764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 936 QA------TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
.. ..++.++|++|++.+++.+|++||+.+....+. ...+...+.++++++.++|.+..+..+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 31 235679999999999999999999988654331 233444567889999999988777654 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI 1088 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~ 1088 (1458)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999775 899999999986 57788999999985 7899
Q ss_pred EeCCC
Q 000506 1089 YAGPL 1093 (1458)
Q Consensus 1089 ~~G~~ 1093 (1458)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 88874
No 133
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1e-36 Score=356.46 Aligned_cols=207 Identities=28% Similarity=0.410 Sum_probs=178.1
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc--ccceEEEecCCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV--PQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 259 (1458)
++++|+|+|++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++.... .++.+||++|++.+++.+
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 81 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDL 81 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCC
Confidence 356999999999999999999999999999999999999998 999999999875421 245799999999999999
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||+||+.+.++..+... .+ ....++.+++.+||++..|+.+++
T Consensus 82 tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~--- 124 (302)
T TIGR01188 82 TGRENLEMMGRLYGLPK----------DE------------------------AEERAEELLELFELGEAADRPVGT--- 124 (302)
T ss_pred cHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCChhHhCCchhh---
Confidence 99999998765433110 00 011245689999999988988877
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++++. + ++|+.++|+.+++.++||+|++|++|
T Consensus 125 --LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g-~tvi~~sH~~~~~~~~~d~v~~l~~G 200 (302)
T TIGR01188 125 --YSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEE-G-VTILLTTHYMEEADKLCDRIAIIDHG 200 (302)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC-C-CEEEEECCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999999753 4 55666778889999999999999999
Q ss_pred eEEEEcChhhHHH
Q 000506 420 QIVYQGPREKVLE 432 (1458)
Q Consensus 420 ~iv~~G~~~~~~~ 432 (1458)
++++.|+++++.+
T Consensus 201 ~i~~~g~~~~l~~ 213 (302)
T TIGR01188 201 RIIAEGTPEELKR 213 (302)
T ss_pred EEEEECCHHHHHH
Confidence 9999999988754
No 134
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.9e-37 Score=350.96 Aligned_cols=204 Identities=25% Similarity=0.320 Sum_probs=175.4
Q ss_pred cccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc---c----ccceEEEEccCC
Q 000506 878 EDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA---T----FARVSGYCEQND 950 (1458)
Q Consensus 878 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~ 950 (1458)
.+.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++
T Consensus 34 ~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 34 TGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred cCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 445679999999999999999999999999999999999876 4789999999876421 1 135799999999
Q ss_pred CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000506 951 IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIF 1030 (1458)
Q Consensus 951 ~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~ill 1030 (1458)
.+++.+||+||+.+..... .....+..+.++++++.++|.+..++.++ .||||||||++||+||+.+|+||+
T Consensus 112 ~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrv~lAral~~~p~ill 183 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYPD-----ELSGGMQQRVGLARALAVDPDILL 183 (269)
T ss_pred ccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999998865432 12234445678899999999887777654 799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1031 MDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1031 LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 184 LDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 184 MDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999754 899999999986 57788999999985 788888875
No 135
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.3e-36 Score=338.90 Aligned_cols=206 Identities=29% Similarity=0.400 Sum_probs=175.4
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 56788887662 12469999999999999999999999999999999999876 47899999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 936 QA------TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
.. .+++.++|++|++.+++.+||+|++.+....+. ...+..++.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 31 245679999999998999999999988754321 223344567889999999987766654 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.||++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999999877999999999986 577789999999863
No 136
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.3e-36 Score=340.22 Aligned_cols=213 Identities=27% Similarity=0.405 Sum_probs=180.2
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++. +++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (220)
T cd03263 2 QIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRT 68 (220)
T ss_pred EEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 56777776531 11469999999999999999999999999999999999876 479999999987643
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 937 --ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
..+++.++|++|++.+++..||+||+.+....+. .+.++..+.++++++.++|.+..++.+ ..|||||||
T Consensus 69 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 140 (220)
T cd03263 69 DRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKR 140 (220)
T ss_pred chHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHH
Confidence 2345679999999998889999999988654332 233344556889999999988777664 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
|++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 141 rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 141 KLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999875 599999999986 57778999999985 788888875
No 137
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=363.64 Aligned_cols=207 Identities=26% Similarity=0.402 Sum_probs=178.2
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMT 260 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 260 (1458)
.+++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++....+ ++.++||+|++.+++.+|
T Consensus 15 ~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~t 91 (369)
T PRK11000 15 DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLS 91 (369)
T ss_pred CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCC
Confidence 346999999999999999999999999999999999999998 9999999998865433 467999999999999999
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+||+.|+.+..+... .+ ....++.+++.+||++..|+.+++
T Consensus 92 v~eni~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~lgL~~~~~~~~~~---- 133 (369)
T PRK11000 92 VAENMSFGLKLAGAKK----------EE------------------------INQRVNQVAEVLQLAHLLDRKPKA---- 133 (369)
T ss_pred HHHHHHhHHhhcCCCH----------HH------------------------HHHHHHHHHHHcCChhhhcCChhh----
Confidence 9999998765332110 00 011245688999999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+..+ ++++.++|+.+++.+++|+|++|++|+
T Consensus 134 -LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tvI~vTHd~~~~~~~~d~i~vl~~G~ 211 (369)
T PRK11000 134 -LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLG-RTMIYVTHDQVEAMTLADKIVVLDAGR 211 (369)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhC-CEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999876434 456667788899999999999999999
Q ss_pred EEEEcChhhHH
Q 000506 421 IVYQGPREKVL 431 (1458)
Q Consensus 421 iv~~G~~~~~~ 431 (1458)
++..|+++++.
T Consensus 212 i~~~g~~~~i~ 222 (369)
T PRK11000 212 VAQVGKPLELY 222 (369)
T ss_pred EEEEcCHHHHH
Confidence 99999998874
No 138
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-36 Score=340.45 Aligned_cols=217 Identities=26% Similarity=0.349 Sum_probs=181.1
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|++.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 47889999877410 011469999999999999999999999999999999999876 4799999999876
Q ss_pred Cccc------c-cceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000506 935 NQAT------F-ARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDG 1007 (1458)
Q Consensus 935 ~~~~------~-~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1007 (1458)
.... . ++.++|++|++.+++.+||+||+.+....+ ....++.+++++++++.+||.+..++.+ ..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 4321 2 256999999998899999999999865432 1233444567899999999988776654 47
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1008 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|+++ ++ +.+|++++|.+ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999975 5899999999985 34 45689999985 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
++..|++
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9988875
No 139
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.9e-37 Score=338.62 Aligned_cols=192 Identities=30% Similarity=0.405 Sum_probs=164.8
Q ss_pred ceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcccccceEEEEccCCC-CCCCCCHH
Q 000506 881 LQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQATFARVSGYCEQNDI-HSPHVTVY 959 (1458)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~lTV~ 959 (1458)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+......++.+||++|++. .+...||+
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 469999999999999999999999999999999999876 479999999988644445567999999974 34567999
Q ss_pred HHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000506 960 ESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1039 (1458)
Q Consensus 960 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1039 (1458)
||+.+..... . . ..+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D--A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C--c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754321 1 1 1245789999999998777765 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEE
Q 000506 1040 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI 1088 (1458)
Q Consensus 1040 ~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~ 1088 (1458)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999878999999999986 57778999999986 5653
No 140
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.1e-36 Score=343.20 Aligned_cols=214 Identities=23% Similarity=0.374 Sum_probs=182.2
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56788887663 2469999999999999999999999999999999999876 47899999998764
Q ss_pred c-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 936 Q-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
. ...++.++|++|++..++.+||+|++.+...... ....++..+.+.++++.+||.+..+..+ +.|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 2 2345679999999998999999999987642111 2233445567889999999987777654 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.||++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999986 57778999999985 789998
Q ss_pred CCC
Q 000506 1091 GPL 1093 (1458)
Q Consensus 1091 G~~ 1093 (1458)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 875
No 141
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.1e-37 Score=370.79 Aligned_cols=214 Identities=22% Similarity=0.441 Sum_probs=178.8
Q ss_pred ccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCC
Q 000506 177 PSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQND 253 (1458)
Q Consensus 177 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d 253 (1458)
++.+++.+||+|+|++|+|||.+||+|||||||||+.++|..+++|+ +|+|.+||+|+.+.++ |+.||+|.|+|
T Consensus 475 YP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEP 551 (716)
T KOG0058|consen 475 YPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEP 551 (716)
T ss_pred cCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccc
Confidence 35566788999999999999999999999999999999999999998 9999999999998765 58899999999
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTM 333 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 333 (1458)
.+|.. ||+|||.|+... .+.+++..++.++. ..+.|. ++++..||.
T Consensus 552 vLFs~-sI~eNI~YG~~~-------------------------~t~e~i~~AAk~AN-----ah~FI~---~~p~gY~T~ 597 (716)
T KOG0058|consen 552 VLFSG-SIRENIAYGLDN-------------------------ATDEEIEAAAKMAN-----AHEFIT---NFPDGYNTV 597 (716)
T ss_pred eeecc-cHHHHHhcCCCC-------------------------CCHHHHHHHHHHhC-----hHHHHH---hCccccccc
Confidence 99976 999999997531 11122233333222 234443 589999999
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEE
Q 000506 334 VGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNI 413 (1458)
Q Consensus 334 vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v 413 (1458)
||+. ...||||||||++|||||+++|+||||||.||+||+.+...+.+.|.+..+ ++|+++ |.|. -.+.+.+|+|
T Consensus 598 VGEk-G~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlv-IAHR-LSTV~~Ad~I 672 (716)
T KOG0058|consen 598 VGEK-GSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLV-IAHR-LSTVRHADQI 672 (716)
T ss_pred cCCc-cccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEE-Eehh-hhHhhhccEE
Confidence 9983 223999999999999999999999999999999999999999999988765 456555 4443 4677899999
Q ss_pred EEEcCCeEEEEcChhhHHH
Q 000506 414 ILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 414 ~lL~~G~iv~~G~~~~~~~ 432 (1458)
+++++|++++.|+.+|+++
T Consensus 673 vvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 673 VVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEEcCCeEEecccHHHHhh
Confidence 9999999999999999875
No 142
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.3e-36 Score=345.02 Aligned_cols=214 Identities=25% Similarity=0.361 Sum_probs=182.0
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 67888887763 2459999999999999999999999999999999999876 47899999998754
Q ss_pred c-----------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000506 936 Q-----------ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPG 1004 (1458)
Q Consensus 936 ~-----------~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1004 (1458)
. ...++.++|++|++.+++..||+||+.++..... ....++..+.++++++.+||.+..++.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 142 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSYP---- 142 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCCh----
Confidence 2 1235679999999999999999999987543211 1233445567889999999987766654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++
T Consensus 143 -~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 143 -RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred -hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999999877999999999986 57788999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 789888874
No 143
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=351.11 Aligned_cols=219 Identities=22% Similarity=0.322 Sum_probs=182.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13637 2 SIKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDI 71 (287)
T ss_pred EEEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 367889988774210 012469999999999999999999999999999999999876 4799999999986
Q ss_pred Cc-----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC--ccccccccCCCCC
Q 000506 935 NQ-----ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE--PLTNAMVGLPGVD 1006 (1458)
Q Consensus 935 ~~-----~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~vg~~~~~ 1006 (1458)
.. ...++.+|||+|++. .+...||+|++.|..... ..+.++..++++++++.+||. +..++.+ +
T Consensus 72 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----~ 143 (287)
T PRK13637 72 TDKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKSP-----F 143 (287)
T ss_pred CCcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCCc-----c
Confidence 43 134578999999974 334579999999865432 234555667789999999997 5566553 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
.||||||||++||+||+.+|++|+|||||+|||+.++..++++|++++++ |+|||++||+++ ++.+.||++++|++ |
T Consensus 144 ~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G 221 (287)
T PRK13637 144 ELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-G 221 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999865 899999999986 57788999999985 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13637 222 KCELQGTP 229 (287)
T ss_pred EEEEECCH
Confidence 89999875
No 144
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.8e-36 Score=357.51 Aligned_cols=208 Identities=29% Similarity=0.394 Sum_probs=178.4
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc--ccceEEEecCCCCCCCC
Q 000506 181 RKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV--PQRTCAYISQNDLHFGE 258 (1458)
Q Consensus 181 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~ 258 (1458)
+++.+|+|||++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++.... .++.+||++|++.+++.
T Consensus 52 ~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~ 128 (340)
T PRK13536 52 GDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLE 128 (340)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCC
Confidence 3456999999999999999999999999999999999999998 999999999875432 34679999999999999
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||+||+.|.+...+... .+ .....+.+++.+||++..++.+++
T Consensus 129 ~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~ll~~~~L~~~~~~~~~~-- 172 (340)
T PRK13536 129 FTVRENLLVFGRYFGMST----------RE------------------------IEAVIPSLLEFARLESKADARVSD-- 172 (340)
T ss_pred CcHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhCCChhh--
Confidence 999999987554332110 00 011234578899999999998887
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ .+ ++|+.++|+.+++.++||+|++|++
T Consensus 173 ---LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~g-~tilisSH~l~e~~~~~d~i~il~~ 247 (340)
T PRK13536 173 ---LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RG-KTILLTTHFMEEAERLCDRLCVLEA 247 (340)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEECCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999975 34 5666677889999999999999999
Q ss_pred CeEEEEcChhhHHH
Q 000506 419 GQIVYQGPREKVLE 432 (1458)
Q Consensus 419 G~iv~~G~~~~~~~ 432 (1458)
|+++++|+++++.+
T Consensus 248 G~i~~~g~~~~l~~ 261 (340)
T PRK13536 248 GRKIAEGRPHALID 261 (340)
T ss_pred CEEEEEcCHHHHHh
Confidence 99999999998864
No 145
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.9e-37 Score=325.09 Aligned_cols=213 Identities=24% Similarity=0.401 Sum_probs=192.8
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
+++++|+.++ +.+.+++|+||.++||++++++|+|||||||++++|.|... +++|+|.++|.+.+
T Consensus 3 L~ie~vtK~F-------------g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~ 67 (300)
T COG4152 3 LEIEGVTKSF-------------GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLS 67 (300)
T ss_pred eEEecchhcc-------------CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchh
Confidence 5666666544 46789999999999999999999999999999999999987 58999999999986
Q ss_pred cccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000506 936 QATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKR 1015 (1458)
Q Consensus 936 ~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1015 (1458)
.. .+.+|||+|.+..+++.+||.|.|.|-|.|+ .++.++.++.++..|+.+++......++ +.||.|++|+
T Consensus 68 ~~-~~~rIGyLPEERGLy~k~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQK 138 (300)
T COG4152 68 QE-IKNRIGYLPEERGLYPKMTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQK 138 (300)
T ss_pred hh-hhhhcccChhhhccCccCcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHH
Confidence 53 4567999999999999999999999999887 4667888888999999999998887765 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1016 l~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
+.+-.+++++|++++||||+|||||.+...+-+.+.+++++|.|||+++|++. .+.++||++++|++ |+.|..|++.
T Consensus 139 IQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v~ 215 (300)
T COG4152 139 IQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTVE 215 (300)
T ss_pred HHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccHH
Confidence 99999999999999999999999999999999999999999999999999987 68999999999986 7888889863
No 146
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.6e-36 Score=338.10 Aligned_cols=206 Identities=25% Similarity=0.363 Sum_probs=174.9
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
.++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 4677777663 12469999999999999999999999999999999999876 478999999987642
Q ss_pred c------cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 937 A------TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 937 ~------~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
. ..++.++|++|++.+++.+||+||+.+....+. ...++.++.++++++.+++.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1 245679999999999999999999988754331 233444567889999999988777654 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
|||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |+
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999999999999999999999999999777999999999986 56778999999985 54
No 147
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-36 Score=343.79 Aligned_cols=212 Identities=28% Similarity=0.399 Sum_probs=180.5
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 56788887663 2469999999999999999999999999999999999876 47899999998764
Q ss_pred cccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000506 936 QATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKR 1015 (1458)
Q Consensus 936 ~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1015 (1458)
. ..+.+||++|++.+++..||+||+.+....+ ....++..+.++++++.++|.+..++.+ ..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHH
Confidence 3 2345899999999889999999998765432 1233444567899999999987776654 4799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEec-CcEEEEeCCC
Q 000506 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKR-GGQVIYAGPL 1093 (1458)
Q Consensus 1016 l~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~~-gG~~~~~G~~ 1093 (1458)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|++. ++.+.||++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999986 57788999999984 5899888764
No 148
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-37 Score=327.71 Aligned_cols=207 Identities=27% Similarity=0.396 Sum_probs=182.5
Q ss_pred ccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc----cccceEEEEccCCCCCC
Q 000506 879 DRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA----TFARVSGYCEQNDIHSP 954 (1458)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 954 (1458)
+...+|+|||+++++||++||+||||||||||+|+|+|..+ +++|+|.++|+++... ..+..++--+|...+|+
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 46789999999999999999999999999999999999987 4899999999987542 23456888999999999
Q ss_pred CCCHHHHHHHHHhhhc--------CCC-CCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000506 955 HVTVYESLLFSAWLRL--------SSD-IDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVAN 1025 (1458)
Q Consensus 955 ~lTV~e~l~f~~~lr~--------~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~ 1025 (1458)
.+||.||+..++..+. +.. ...++..+++.++|+.+||.+.+|...| +||+||||||.|||||+.+
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 9999999998765331 111 1245556788999999999999999876 6999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1026 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1026 p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
|++|+||||.+||.+..+..+.+.|+++.++ |.||+++-|+++ -++.+||||+||+. |+++..|++.
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEeccC-CcCcccCCHH
Confidence 9999999999999999999999999999874 799999999998 48999999999986 7999999974
No 149
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=343.11 Aligned_cols=213 Identities=27% Similarity=0.399 Sum_probs=180.2
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++. .+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCc
Confidence 46777776531 1459999999999999999999999999999999999876 478999999987542
Q ss_pred ---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc--cccccccCCCCCCCCHH
Q 000506 937 ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP--LTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSgG 1011 (1458)
...++.++|++|++.+++.+||+||+.+...++ ..+.++..+.++++++.+++.+ ..++.+ +.||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~-----~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRYP-----HELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcCh-----hhCCHH
Confidence 234567999999999999999999998865432 1233444567889999999985 555543 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999765 899999999986 57788999999985 788888
Q ss_pred CCC
Q 000506 1091 GPL 1093 (1458)
Q Consensus 1091 G~~ 1093 (1458)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 875
No 150
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.3e-36 Score=345.52 Aligned_cols=218 Identities=25% Similarity=0.319 Sum_probs=179.4
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.+. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 46778876652 02459999999999999999999999999999999999876 47899999998754
Q ss_pred c------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhh-----cCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000506 936 Q------ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLR-----LSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPG 1004 (1458)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr-----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1004 (1458)
. ..+++.+||++|++.+++.+||+||+.+..... .......++.+++++++++.+++.+..+..+
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 143 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA---- 143 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 2 124567999999999999999999998643210 0001112334567889999999987776654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEec
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKR 1083 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~ 1083 (1458)
..||||||||++||+||+.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|+++ ++.+.||++++|++
T Consensus 144 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 144 -DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 479999999999999999999999999999999999999999999998764 899999999986 57788999999985
Q ss_pred CcEEEEeCCCC
Q 000506 1084 GGQVIYAGPLG 1094 (1458)
Q Consensus 1084 gG~~~~~G~~~ 1094 (1458)
|++++.|+..
T Consensus 222 -G~i~~~~~~~ 231 (243)
T TIGR02315 222 -GEIVFDGAPS 231 (243)
T ss_pred -CEEEecCCHH
Confidence 7888888753
No 151
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=326.41 Aligned_cols=204 Identities=25% Similarity=0.306 Sum_probs=175.5
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc----ccceEEEecCCC--CCCC
Q 000506 184 QILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV----PQRTCAYISQND--LHFG 257 (1458)
Q Consensus 184 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 257 (1458)
++|+|||++|.+||.++|+|+||||||||.++|+|+.+|+ +|+|.++|.+..... ..+.+-+|+||+ .+-|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 5999999999999999999999999999999999999998 999999998776542 356799999997 4789
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc-cccccccC
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI-CADTMVGD 336 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~dt~vg~ 336 (1458)
..||++.|.-..+..+.+. . +..+..+++.+||+. .++..+-+
T Consensus 98 ~~tv~~~l~Epl~~~~~~~----------~--------------------------~~~i~~~L~~VgL~~~~l~R~P~e 141 (252)
T COG1124 98 RRTVGRILSEPLRPHGLSK----------S--------------------------QQRIAELLDQVGLPPSFLDRRPHE 141 (252)
T ss_pred chhHHHHHhhhhccCCccH----------H--------------------------HHHHHHHHHHcCCCHHHHhcCchh
Confidence 9999999976655432211 0 111455889999975 55555544
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+|||||+.+|++|++|||||+||++.+.+|++.|.++.+..+ .+.+.++|+..-+..+||||++|
T Consensus 142 -----LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~-lt~l~IsHdl~~v~~~cdRi~Vm 215 (252)
T COG1124 142 -----LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERG-LTYLFISHDLALVEHMCDRIAVM 215 (252)
T ss_pred -----cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcC-ceEEEEeCcHHHHHHHhhheeee
Confidence 999999999999999999999999999999999999999999999988654 56677889999999999999999
Q ss_pred cCCeEEEEcChhhHHH
Q 000506 417 SEGQIVYQGPREKVLE 432 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~~~ 432 (1458)
++|++++.++.+++.+
T Consensus 216 ~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 216 DNGQIVEIGPTEELLS 231 (252)
T ss_pred eCCeEEEeechhhhhc
Confidence 9999999999999864
No 152
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=316.60 Aligned_cols=226 Identities=26% Similarity=0.399 Sum_probs=189.5
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++.+|++|++. .+++|++||++++|||++||+|||||||||||++|+|... +.+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChh
Confidence 46788998874 4679999999999999999999999999999999999876 47899999999875
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 936 Q---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
. ....+..+.+||+-.+....||+|-+.++..-.. ..-...+..+.++++|...++.+++.+.. ..|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~-~g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHR-SGREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhcccccc-cCCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchH
Confidence 4 3456788999999998888999999999753211 11122244556889999999999887653 4799999
Q ss_pred HHHHHHHHHHhh------CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1013 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1013 rqRl~ia~aL~~------~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
||||.+||.|++ ++++||||||||.||...+..++++.|+++++|..|+|+.||.+. ...++||+++|++ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 999999999975 456999999999999999999999999999999999999999984 6788999999985 89
Q ss_pred EEEeCCCCc--chHHHHHHH
Q 000506 1087 VIYAGPLGR--QSQKLVEYF 1104 (1458)
Q Consensus 1087 ~~~~G~~~~--~~~~~~~~f 1104 (1458)
++..|++.+ ..+.+...|
T Consensus 219 v~a~g~p~~vlt~Etl~~vy 238 (259)
T COG4559 219 VIASGSPQDVLTDETLERVY 238 (259)
T ss_pred EeecCCHHHhcCHHHHHHHh
Confidence 999998754 334455555
No 153
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.8e-36 Score=339.58 Aligned_cols=210 Identities=27% Similarity=0.420 Sum_probs=176.1
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (222)
T cd03224 2 EVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITG 66 (222)
T ss_pred EEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCC
Confidence 4677776552 2469999999999999999999999999999999999976 478999999987643
Q ss_pred c---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHc-CCCccccccccCCCCCCCCHH
Q 000506 937 A---T-FARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLV-ELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 937 ~---~-~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
. . .++.++|++|++.+++.+|++||+.+...... ..+..+.++++++.+ ++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G 136 (222)
T cd03224 67 LPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQLA-----GTLSGG 136 (222)
T ss_pred CCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCch-----hhCCHH
Confidence 2 1 24569999999999999999999988654321 122344567788887 4766666554 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 137 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 214 (222)
T cd03224 137 EQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEG 214 (222)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeC
Confidence 999999999999999999999999999999999999999999877899999999986 57788999999985 7898888
Q ss_pred CC
Q 000506 1092 PL 1093 (1458)
Q Consensus 1092 ~~ 1093 (1458)
+.
T Consensus 215 ~~ 216 (222)
T cd03224 215 TA 216 (222)
T ss_pred CH
Confidence 74
No 154
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-36 Score=347.78 Aligned_cols=215 Identities=25% Similarity=0.335 Sum_probs=182.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++. ...+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYKD------------GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeCC------------CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 3788999887631 2359999999999999999999999999999999999876 4789999999886
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQ---ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
.. ...++.+||++|++. .++..||.|++.|..... ..+.++.++.++++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 233567999999973 445689999998864321 2334444567899999999988777765 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 56788999999985 789999
Q ss_pred CCC
Q 000506 1091 GPL 1093 (1458)
Q Consensus 1091 G~~ 1093 (1458)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 885
No 155
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4e-36 Score=346.14 Aligned_cols=215 Identities=20% Similarity=0.309 Sum_probs=182.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. ++.+|+|||++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 478899988763 2469999999999999999999999999999999999876 4789999999876
Q ss_pred Ccc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCC
Q 000506 935 NQA------TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGL 1008 (1458)
Q Consensus 935 ~~~------~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 1008 (1458)
... ..++.++|++|+..+++.+||.||+.+...... ..+.++.++.+.++++.+++.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 135679999999999999999999987643211 1233344556788999999988777764 479
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEE
Q 000506 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQV 1087 (1458)
Q Consensus 1009 SgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~ 1087 (1458)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999765 899999999976 57788999999985 789
Q ss_pred EEeCCC
Q 000506 1088 IYAGPL 1093 (1458)
Q Consensus 1088 ~~~G~~ 1093 (1458)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 998875
No 156
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.5e-37 Score=372.20 Aligned_cols=215 Identities=27% Similarity=0.424 Sum_probs=183.2
Q ss_pred eEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCee
Q 000506 854 LSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYP 933 (1458)
Q Consensus 854 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1458)
-.++|+||+|.|+.. ++.++|+|+||+|+|||.|||+||||+||||+.+.|-.... +.+|+|.+||+|
T Consensus 464 G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~~ 531 (716)
T KOG0058|consen 464 GVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGVP 531 (716)
T ss_pred ceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCee
Confidence 479999999999754 35689999999999999999999999999999999999877 589999999999
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHH-----HHHHHHHHcCCCccccccccCCCC
Q 000506 934 KNQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKM-----FVDEVMDLVELEPLTNAMVGLPGV 1005 (1458)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~-----~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1458)
+.+ ..+++++|+|.|+|.+|. -||+||+.|+.. ..+.++... -+.+.+ .++.+-.||.||..|.
T Consensus 532 i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 532 ISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEKGS 603 (716)
T ss_pred hhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCccc
Confidence 754 457899999999999986 599999999753 233333221 122222 3566778999997654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
.||||||||++|||||++||+||||||.||+||+++...|.++|.++.+ ++|||++.|+.| ..+.+|+|+++++ |
T Consensus 604 -qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~-G 678 (716)
T KOG0058|consen 604 -QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK-G 678 (716)
T ss_pred -cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC-C
Confidence 7999999999999999999999999999999999999999999998765 599999999875 6788999999986 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
++++.|.-
T Consensus 679 ~V~E~G~h 686 (716)
T KOG0058|consen 679 RVVEMGTH 686 (716)
T ss_pred eEEecccH
Confidence 99999964
No 157
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-36 Score=323.72 Aligned_cols=214 Identities=25% Similarity=0.395 Sum_probs=180.8
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|++..| ++.++|++||+++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|++++
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecC
Confidence 5677777655 35689999999999999999999999999999999999987 36899999999875
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcC-CCccccccccCCCCCCCCH
Q 000506 936 QA----TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVE-LEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~LSg 1010 (1458)
.. ..++-++||||....||.+||+|||..++..+.. ++..+..++++.+.+- |.+.++...| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 42 3456799999999999999999999988765432 1112222677777774 5666676655 6999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
||||-++|||||+++|++|+|||||.||-|.-..+|.+.|++++++ |.||+++-+... ...+.+||.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999976 779999988765 47789999999985 89999
Q ss_pred eCCCCc
Q 000506 1090 AGPLGR 1095 (1458)
Q Consensus 1090 ~G~~~~ 1095 (1458)
.|+..+
T Consensus 218 ~G~~~e 223 (237)
T COG0410 218 SGTAAE 223 (237)
T ss_pred ecCHHH
Confidence 999643
No 158
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-36 Score=341.75 Aligned_cols=215 Identities=27% Similarity=0.400 Sum_probs=182.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (241)
T PRK10895 3 TLTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDI 67 (241)
T ss_pred eEEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEC
Confidence 367788887663 2469999999999999999999999999999999999876 4789999999876
Q ss_pred Ccc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQA----TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
... ..++.++|++|++.+++.+||.||+.+...++. ..+.++.+..++++++.+++.+..+..+ +.|||
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 140 (241)
T PRK10895 68 SLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMG-----QSLSG 140 (241)
T ss_pred CCCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcch-----hhCCH
Confidence 431 234679999999998999999999987643321 1233444567889999999987766554 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.+++++++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~ 218 (241)
T PRK10895 141 GERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAH 218 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEee
Confidence 9999999999999999999999999999999999999999999877999999999985 58889999999985 789988
Q ss_pred CCC
Q 000506 1091 GPL 1093 (1458)
Q Consensus 1091 G~~ 1093 (1458)
|+.
T Consensus 219 ~~~ 221 (241)
T PRK10895 219 GTP 221 (241)
T ss_pred CCH
Confidence 875
No 159
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=350.54 Aligned_cols=219 Identities=21% Similarity=0.312 Sum_probs=182.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++|+++.++... .....+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~ 71 (305)
T PRK13651 2 QIKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDE 71 (305)
T ss_pred EEEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceec
Confidence 368899998874210 012359999999999999999999999999999999999886 4689999998753
Q ss_pred C---------------------------cccccceEEEEccCC-CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHH
Q 000506 935 N---------------------------QATFARVSGYCEQND-IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEV 986 (1458)
Q Consensus 935 ~---------------------------~~~~~~~~gyv~Q~~-~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~ 986 (1458)
. ....++.+|||+|++ ..+...||+|++.|+.... ..+.++..++++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~ 148 (305)
T PRK13651 72 KNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKY 148 (305)
T ss_pred ccccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHH
Confidence 1 123456799999986 3344579999999875432 34455566788999
Q ss_pred HHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEec
Q 000506 987 MDLVELE-PLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 1065 (1458)
Q Consensus 987 l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H 1065 (1458)
++.+||. +..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|
T Consensus 149 l~~~gL~~~~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtH 223 (305)
T PRK13651 149 IELVGLDESYLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTH 223 (305)
T ss_pred HHHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEee
Confidence 9999996 5666654 479999999999999999999999999999999999999999999999877999999999
Q ss_pred CccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1066 QPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1066 q~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
++. ++.+.+|++++|++ |++++.|+.
T Consensus 224 d~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 224 DLD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred CHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 976 57789999999985 789999986
No 160
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=349.66 Aligned_cols=218 Identities=25% Similarity=0.325 Sum_probs=181.5
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|+++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67899998884210 012459999999999999999999999999999999999876 47899999999763
Q ss_pred c-------ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000506 936 Q-------ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVD 1006 (1458)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1006 (1458)
. ...++.+|||+|++. .+...||+||+.|+.... ..+.++.+++++++++.++|. +..++.+ .
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARSP-----F 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCCc-----c
Confidence 1 234567999999863 233579999999875422 234445556789999999997 5566654 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
.|||||||||+||++|+.+|++|+|||||+|||+.++..++++|++++++ |.|||+++|+++ ++.+.+||+++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999765 999999999986 57888999999985 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999975
No 161
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=5e-36 Score=335.94 Aligned_cols=209 Identities=26% Similarity=0.333 Sum_probs=176.7
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56788887762 12469999999999999999999999999999999999876 47899999998753
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 936 QA------TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
.. .+++.++|++|++.+++..||+|++.+....+ ....++..+.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCC
Confidence 21 14567999999998888999999998865432 2233444556889999999988776654 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI 1088 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~ 1088 (1458)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 99999999999999999999999999999999999999999999877899999999986 57778999999986 6653
No 162
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-36 Score=334.90 Aligned_cols=208 Identities=33% Similarity=0.484 Sum_probs=176.1
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.+. ++.+|+|+|+++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCcccc
Confidence 5677777653 246999999999999 999999999999999999999876 478999999987543
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 937 --ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
...++.++|++|++.+++.+||+|++.+....+. .+.++..+.++++++.+++.+..++.+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHH
Confidence 2345779999999999999999999988655431 223334566889999999988777664 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999976 599999999986 46678999999985 6877654
No 163
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=5e-36 Score=337.48 Aligned_cols=217 Identities=25% Similarity=0.305 Sum_probs=173.8
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
+.++|+++.+... .....+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5678888776310 001269999999999999999999999999999999999876 47899999998764
Q ss_pred c------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000506 936 Q------ATFARVSGYCEQND--IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVD 1006 (1458)
Q Consensus 936 ~------~~~~~~~gyv~Q~~--~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1006 (1458)
. ..+++.++|++|++ .+.+.+||+||+.+........ ...+.....++++++.+++. +..+..+ .
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRYP-----H 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCCc-----h
Confidence 3 23456899999998 4567899999998865433211 11111122236889999995 4555554 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999876 899999999986 56678999999985 7
Q ss_pred EEEEeC
Q 000506 1086 QVIYAG 1091 (1458)
Q Consensus 1086 ~~~~~G 1091 (1458)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 877654
No 164
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3.7e-36 Score=334.93 Aligned_cols=206 Identities=24% Similarity=0.365 Sum_probs=174.9
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ .+.+|+++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|++...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 4677777663 2469999999999999999999999999999999999876 478999999987632
Q ss_pred -----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 937 -----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 937 -----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
...++.++|++|++.+++.+|++||+.+...... ....++..+.++++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 2345789999999999999999999988643111 2233444567889999999988777664 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999999999999999999999999999877999999999986 57788999999986 54
No 165
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-36 Score=335.03 Aligned_cols=200 Identities=32% Similarity=0.462 Sum_probs=168.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCCH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMTV 261 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 261 (1458)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 56999999999999999999999999999999999999987 9999999998764322 4579999999989999999
Q ss_pred HHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCC
Q 000506 262 RETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRG 341 (1458)
Q Consensus 262 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 341 (1458)
+||+.++....+.. +.+ ....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03259 90 AENIAFGLKLRGVP----------KAE------------------------IRARVRELLELVGLEGLLNRYPHE----- 130 (213)
T ss_pred HHHHHhHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCChhhhhcChhh-----
Confidence 99998764322110 000 011234578899999888888877
Q ss_pred CChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeE
Q 000506 342 VSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQI 421 (1458)
Q Consensus 342 LSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~i 421 (1458)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELG-ITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999876434 4566677888899999999999999999
Q ss_pred EEEc
Q 000506 422 VYQG 425 (1458)
Q Consensus 422 v~~G 425 (1458)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 166
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7.3e-36 Score=337.72 Aligned_cols=212 Identities=29% Similarity=0.436 Sum_probs=178.5
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 46778877663 2469999999999999999999999999999999999876 47899999998754
Q ss_pred cc--cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 936 QA--TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 936 ~~--~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
.. ...+.++|++|++.+++.+||+|++.+....+ ....++..+.++++++.+||.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 21 22357999999998888999999998765432 2233444567889999999988777664 37999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ +|+|||+++|+++ ++ +.+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999975 5899999999986 35 45999999985 78888887
Q ss_pred C
Q 000506 1093 L 1093 (1458)
Q Consensus 1093 ~ 1093 (1458)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 4
No 167
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-36 Score=336.22 Aligned_cols=206 Identities=29% Similarity=0.404 Sum_probs=174.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc--ccceEEEecCCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV--PQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 259 (1458)
++++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 12 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 88 (220)
T cd03265 12 DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDEL 88 (220)
T ss_pred CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccC
Confidence 356999999999999999999999999999999999999988 999999998765321 235799999999999999
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||+||+.+..+..+... .+ ....++.+++.+||++..++.+++
T Consensus 89 tv~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~--- 131 (220)
T cd03265 89 TGWENLYIHARLYGVPG----------AE------------------------RRERIDELLDFVGLLEAADRLVKT--- 131 (220)
T ss_pred cHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCHHHhhCChhh---
Confidence 99999988654322100 00 011245578999999888888877
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+ ++++.++|+.+++.+++|++++|.+|
T Consensus 132 --LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~tH~~~~~~~~~d~i~~l~~G 208 (220)
T cd03265 132 --YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFG-MTILLTTHYMEEAEQLCDRVAIIDHG 208 (220)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999876434 45666788889999999999999999
Q ss_pred eEEEEcChhhH
Q 000506 420 QIVYQGPREKV 430 (1458)
Q Consensus 420 ~iv~~G~~~~~ 430 (1458)
+++..|+++++
T Consensus 209 ~i~~~~~~~~~ 219 (220)
T cd03265 209 RIIAEGTPEEL 219 (220)
T ss_pred EEEEeCChHHc
Confidence 99999987653
No 168
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=8.2e-36 Score=341.60 Aligned_cols=215 Identities=21% Similarity=0.299 Sum_probs=181.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 378899988763 2469999999999999999999999999999999999876 4789999999875
Q ss_pred Cc----------------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc-c
Q 000506 935 NQ----------------ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLT-N 997 (1458)
Q Consensus 935 ~~----------------~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-~ 997 (1458)
.. ..+++.++|++|++.+++.+||+||+.++..... .....+.++++.++++.+|+.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 1345679999999999999999999987542111 123444566788999999998753 4
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhce
Q 000506 998 AMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1077 (1458)
Q Consensus 998 ~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~ 1077 (1458)
.. +..||||||||++||+||+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|+++ ++.+.||+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 44 3579999999999999999999999999999999999999999999999877999999999986 57778999
Q ss_pred EEEEecCcEEEEeCCC
Q 000506 1078 LLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1078 vlll~~gG~~~~~G~~ 1093 (1458)
+++|++ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999986 788888875
No 169
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-36 Score=346.44 Aligned_cols=216 Identities=27% Similarity=0.397 Sum_probs=183.2
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ +++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 588999998873 12459999999999999999999999999999999999876 4789999999986
Q ss_pred Cc-----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCC
Q 000506 935 NQ-----ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGL 1008 (1458)
Q Consensus 935 ~~-----~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 1008 (1458)
.. ..+++.+||++|++. .+...||+|++.+..... ..+.++..+.++++++.++|.+..++.+ +.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPT-----HCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCc-----ccC
Confidence 31 234578999999974 334679999998864322 2344455567899999999988777764 479
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEE
Q 000506 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQV 1087 (1458)
Q Consensus 1009 SgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~ 1087 (1458)
|||||||++||+||+.+|++|+|||||+|||+.++..++++|++++++ |+|||+++|+++ ++.+.||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 899999999986 46678999999986 789
Q ss_pred EEeCCCC
Q 000506 1088 IYAGPLG 1094 (1458)
Q Consensus 1088 ~~~G~~~ 1094 (1458)
++.|+..
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9999863
No 170
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=8.4e-36 Score=339.59 Aligned_cols=214 Identities=24% Similarity=0.329 Sum_probs=178.8
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECCe
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISGY 932 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1458)
++++|+++.+. +..+|+|+|++|++||+++|+|+||||||||+++|+|..++. ..+|+|.++|+
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56788887763 235899999999999999999999999999999999987631 12899999999
Q ss_pred eCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC----ccccccccCC
Q 000506 933 PKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE----PLTNAMVGLP 1003 (1458)
Q Consensus 933 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~~ 1003 (1458)
+... ...++.++|++|++.+++ .||+||+.+....+. ..+.++..+.++++++.+||. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 234567999999998888 999999988654331 123344456788999999997 555544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEec
Q 000506 1004 GVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1083 (1458)
Q Consensus 1004 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~ 1083 (1458)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999876 489999999986 57788999999985
Q ss_pred CcEEEEeCCC
Q 000506 1084 GGQVIYAGPL 1093 (1458)
Q Consensus 1084 gG~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 788888875
No 171
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-36 Score=341.19 Aligned_cols=206 Identities=22% Similarity=0.297 Sum_probs=178.0
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 488999998773 2469999999999999999999999999999999999876 4789999999865
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 935 NQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
. ..++.++|++|++.+++.+||+||+.+... . ..++.++++++.++|.+..+..+ ..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 3 345679999999998898999999987421 0 12345788999999988776654 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999986 57788999999985 788888764
No 172
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-36 Score=350.18 Aligned_cols=218 Identities=23% Similarity=0.342 Sum_probs=181.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 589999999884210 012459999999999999999999999999999999999987 4789999999875
Q ss_pred Cc-------------------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC
Q 000506 935 NQ-------------------ATFARVSGYCEQND--IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE 993 (1458)
Q Consensus 935 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~ 993 (1458)
.. ..+++.+|||+|++ .+++ .||+||+.|+.... ..+.++..++++++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13467899999987 3454 59999998864321 234445556788999999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHH
Q 000506 994 -PLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1072 (1458)
Q Consensus 994 -~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~ 1072 (1458)
+..++. +..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455554 3479999999999999999999999999999999999999999999999877999999999986 477
Q ss_pred HhhceEEEEecCcEEEEeCCC
Q 000506 1073 EAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1073 ~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
+.+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999985 799999985
No 173
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=9e-36 Score=334.12 Aligned_cols=218 Identities=24% Similarity=0.370 Sum_probs=182.2
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 4667776552 2469999999999999999999999999999999999876 478999999987643
Q ss_pred ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHH
Q 000506 937 ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRL 1016 (1458)
Q Consensus 937 ~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl 1016 (1458)
.. .+.++|++|++.+++.+|++||+.+....+. .+ ++.+.++++.+++.+..+..+ ..||||||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHH
Confidence 22 3579999999998899999999987654331 11 235788999999988777664 47999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCCcc
Q 000506 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRQ 1096 (1458)
Q Consensus 1017 ~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~~~ 1096 (1458)
+||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|+...
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~~- 210 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKINK- 210 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChhh-
Confidence 9999999999999999999999999999999999999877999999999986 57788999999985 78999998643
Q ss_pred hHHHHHHHH
Q 000506 1097 SQKLVEYFE 1105 (1458)
Q Consensus 1097 ~~~~~~~f~ 1105 (1458)
.+.+.+.|.
T Consensus 211 ~~~~~~~~~ 219 (223)
T TIGR03740 211 SENLEKLFV 219 (223)
T ss_pred cccHHHHHH
Confidence 233444444
No 174
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.6e-36 Score=379.43 Aligned_cols=207 Identities=29% Similarity=0.499 Sum_probs=179.6
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCCCCCCCC
Q 000506 184 QILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDLHFGEMT 260 (1458)
Q Consensus 184 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 260 (1458)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|+++|. +|+|.+||.++.+... |+.+|||+|++.+|.. |
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~g-S 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSG-S 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhhcC-c
Confidence 5999999999999999999999999999999999999998 9999999999987654 6889999999999966 9
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+||+.++. |+.+.++++++|.+++. .+. +..++...||.||+ +..
T Consensus 563 I~eNi~l~~-------------------------p~~~~e~i~~A~~~ag~-----~~f---I~~lP~gy~t~v~E-~G~ 608 (709)
T COG2274 563 IRENIALGN-------------------------PEATDEEIIEAAQLAGA-----HEF---IENLPMGYDTPVGE-GGA 608 (709)
T ss_pred HHHHHhcCC-------------------------CCCCHHHHHHHHHHhCc-----HHH---HHhccccccccccc-CCC
Confidence 999998742 23334456666666553 233 33589999999997 556
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
+||||||||++|||||+.+|+||+||||||+||+.+...|.+.|.++.+ ++|+|++.|++ .+.+.+|+|++|++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~IaHRl--~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVIIIAHRL--STIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEEEEccc--hHhhhccEEEEccCCc
Confidence 6999999999999999999999999999999999999999999999874 56777766554 5889999999999999
Q ss_pred EEEEcChhhHHH
Q 000506 421 IVYQGPREKVLE 432 (1458)
Q Consensus 421 iv~~G~~~~~~~ 432 (1458)
++.+|+.+++.+
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999876
No 175
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-36 Score=346.78 Aligned_cols=218 Identities=27% Similarity=0.362 Sum_probs=181.5
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++.. ....+.+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|+++|.+..
T Consensus 2 i~~~~v~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPN--------SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 5788999888411 0011359999999999999999999999999999999999876 47899999999863
Q ss_pred c-------ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000506 936 Q-------ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVD 1006 (1458)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1006 (1458)
. ...++.+|||+|++. .+...||.|++.|+.... ..+.++.++++.++++.++|. +..++. +.
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 143 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFEETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----PF 143 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhcccchHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----cc
Confidence 1 234678999999862 333469999999875432 234555667789999999996 455554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |+
T Consensus 144 ~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G~ 221 (288)
T PRK13643 144 ELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-GH 221 (288)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999877999999999986 57788999999985 79
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
+++.|+.
T Consensus 222 i~~~g~~ 228 (288)
T PRK13643 222 IISCGTP 228 (288)
T ss_pred EEEECCH
Confidence 9999986
No 176
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.7e-36 Score=335.99 Aligned_cols=199 Identities=30% Similarity=0.456 Sum_probs=165.7
Q ss_pred ceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcccccceEEEEccCCCCC--CCCCH
Q 000506 881 LQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQATFARVSGYCEQNDIHS--PHVTV 958 (1458)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTV 958 (1458)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. ..++.++|++|++.+. ...||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 459999999999999999999999999999999999876 47899999998653 3456799999998763 34899
Q ss_pred HHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000506 959 YESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1037 (1458)
Q Consensus 959 ~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1037 (1458)
+||+.+....... .....+..++.++++++.+++.+..++.+ ..||||||||++||+||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 00112234456889999999987777654 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1038 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1038 LD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999878999999999986 57788999999974 5 55544
No 177
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-36 Score=354.59 Aligned_cols=207 Identities=27% Similarity=0.363 Sum_probs=177.2
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc------cceEEEecCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP------QRTCAYISQNDLH 255 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~ 255 (1458)
++++|+|+|++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++..... ++.++||+|++.+
T Consensus 17 ~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l 93 (343)
T PRK11153 17 TIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNL 93 (343)
T ss_pred ceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCcc
Confidence 356999999999999999999999999999999999999998 9999999998865321 4579999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
++.+||+||+.+.....+... .+ ....++.+++.+||++..++.+.
T Consensus 94 ~~~~tv~eni~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~gL~~~~~~~~~ 139 (343)
T PRK11153 94 LSSRTVFDNVALPLELAGTPK----------AE------------------------IKARVTELLELVGLSDKADRYPA 139 (343)
T ss_pred CCCCcHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhhCChh
Confidence 999999999998654332110 00 01124557899999988888877
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
+ |||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++..+ ++++.++|+.+++.++||+|++
T Consensus 140 ~-----LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tiilvtH~~~~i~~~~d~v~~ 213 (343)
T PRK11153 140 Q-----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELG-LTIVLITHEMDVVKRICDRVAV 213 (343)
T ss_pred h-----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEE
Confidence 6 999999999999999999999999999999999999999999999976434 4566677888899999999999
Q ss_pred EcCCeEEEEcChhhHH
Q 000506 416 LSEGQIVYQGPREKVL 431 (1458)
Q Consensus 416 L~~G~iv~~G~~~~~~ 431 (1458)
|++|++++.|+.+++.
T Consensus 214 l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 214 IDAGRLVEQGTVSEVF 229 (343)
T ss_pred EECCEEEEEcCHHHHH
Confidence 9999999999998874
No 178
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=6.1e-36 Score=350.16 Aligned_cols=207 Identities=29% Similarity=0.401 Sum_probs=175.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc--ccceEEEecCCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV--PQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 259 (1458)
+.++|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++.... .++.++|++|++.+++.+
T Consensus 16 ~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (303)
T TIGR01288 16 DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEF 92 (303)
T ss_pred CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCC
Confidence 346999999999999999999999999999999999999988 999999999875322 246799999999999999
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||+||+.+..+..+... . + ....++.+++.+||++..++.+++
T Consensus 93 tv~e~l~~~~~~~~~~~----------~----------~--------------~~~~~~~ll~~~~l~~~~~~~~~~--- 135 (303)
T TIGR01288 93 TVRENLLVFGRYFGMST----------R----------E--------------IEAVIPSLLEFARLESKADVRVAL--- 135 (303)
T ss_pred cHHHHHHHHHHHcCCCH----------H----------H--------------HHHHHHHHHHHCCChhHhcCchhh---
Confidence 99999987543321100 0 0 001234578899999988888877
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+ ++|+.++|+.+++.++||+|++|++|
T Consensus 136 --LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g-~til~~sH~~~~~~~~~d~i~~l~~G 211 (303)
T TIGR01288 136 --LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RG-KTILLTTHFMEEAERLCDRLCVLESG 211 (303)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CC-CEEEEECCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999975 34 56666788889999999999999999
Q ss_pred eEEEEcChhhHHH
Q 000506 420 QIVYQGPREKVLE 432 (1458)
Q Consensus 420 ~iv~~G~~~~~~~ 432 (1458)
++++.|+++++.+
T Consensus 212 ~i~~~g~~~~~~~ 224 (303)
T TIGR01288 212 RKIAEGRPHALID 224 (303)
T ss_pred EEEEEcCHHHHHh
Confidence 9999999988754
No 179
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=7.3e-36 Score=334.51 Aligned_cols=211 Identities=26% Similarity=0.359 Sum_probs=174.0
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.+... .+.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 4678888776310 112469999999999999999999999999999999999876 47999999998764
Q ss_pred cc---c---cc-ceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCC
Q 000506 936 QA---T---FA-RVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGL 1008 (1458)
Q Consensus 936 ~~---~---~~-~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 1008 (1458)
.. . ++ +.++|++|++.+++.+||+|++.+....+. ....+..+.+.++++.+|+.+..++.+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 31 1 22 579999999988889999999988654321 223334456789999999988777664 479
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEE
Q 000506 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQV 1087 (1458)
Q Consensus 1009 SgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~ 1087 (1458)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999999764 899999999986 34 55899999986 565
Q ss_pred E
Q 000506 1088 I 1088 (1458)
Q Consensus 1088 ~ 1088 (1458)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 4
No 180
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-36 Score=346.54 Aligned_cols=216 Identities=25% Similarity=0.325 Sum_probs=183.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++.. +.+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 47889999887411 12359999999999999999999999999999999999876 4799999999986
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQ---ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
.. ...++.+||++|++. .++..||+||+.|+.... ..+.++..++++++++.+||.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234568999999974 667889999999875432 2345555667899999999998777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999986 45 67999999985 79998
Q ss_pred eCCC
Q 000506 1090 AGPL 1093 (1458)
Q Consensus 1090 ~G~~ 1093 (1458)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 8875
No 181
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.1e-35 Score=349.92 Aligned_cols=229 Identities=21% Similarity=0.230 Sum_probs=186.0
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++++++............+...+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEEC
Confidence 58899998887531100000001123569999999999999999999999999999999999886 4789999999986
Q ss_pred Ccc------cccceEEEEccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000506 935 NQA------TFARVSGYCEQND--IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGV 1005 (1458)
Q Consensus 935 ~~~------~~~~~~gyv~Q~~--~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 1005 (1458)
... .+++.++||+|++ .++|.+||.|++.+...... ...+.++.+++++++++.++|. +..++. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 431 2456799999997 57889999999988654321 1234556667889999999995 345554 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..|||||||||+||+||+.+|++|++||||+|||..++..++++|+++.++ |.|||++||+++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999765 899999999986 57778999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 799999985
No 182
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4e-36 Score=334.16 Aligned_cols=193 Identities=27% Similarity=0.393 Sum_probs=164.9
Q ss_pred ceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc---ccccceEEEEccCCC-CCCCC
Q 000506 881 LQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ---ATFARVSGYCEQNDI-HSPHV 956 (1458)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 956 (1458)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999876 478999999987542 234567999999975 46678
Q ss_pred CHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000506 957 TVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1458)
Q Consensus 957 TV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTs 1036 (1458)
||+||+.+....+ .....+.++.++++++.++|.+..++.+ ..||||||||++||+||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998865332 1223344456889999999987766654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1037 gLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
|||+.++..+++.|++++++|+|||+++|++. ++...||++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999986 577789999999863
No 183
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-36 Score=346.69 Aligned_cols=218 Identities=22% Similarity=0.341 Sum_probs=181.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|+++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 378899998874210 012469999999999999999999999999999999999876 4789999999886
Q ss_pred Cc-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCC
Q 000506 935 NQ-------ATFARVSGYCEQND--IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPG 1004 (1458)
Q Consensus 935 ~~-------~~~~~~~gyv~Q~~--~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 1004 (1458)
.. ...++.+|||+|++ .+++ .||.||+.|..... ..+.++..++++++++.+||. +..++.
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~----- 142 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS----- 142 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 32 13567899999986 3444 59999999865322 234455566789999999996 566655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEec
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKR 1083 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~ 1083 (1458)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.++|+++.++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~ 221 (286)
T PRK13646 143 PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE 221 (286)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999999764 899999999986 57788999999985
Q ss_pred CcEEEEeCCC
Q 000506 1084 GGQVIYAGPL 1093 (1458)
Q Consensus 1084 gG~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 222 -G~i~~~g~~ 230 (286)
T PRK13646 222 -GSIVSQTSP 230 (286)
T ss_pred -CEEEEECCH
Confidence 789999875
No 184
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-36 Score=341.02 Aligned_cols=218 Identities=22% Similarity=0.247 Sum_probs=181.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 478899988763 2469999999999999999999999999999999999876 4789999999876
Q ss_pred Ccc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC----------C--CCCHHHHHHHHHHHHHHcCCCccccc
Q 000506 935 NQA---T-FARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS----------S--DIDSKTRKMFVDEVMDLVELEPLTNA 998 (1458)
Q Consensus 935 ~~~---~-~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~----------~--~~~~~~~~~~v~~~l~~l~L~~~~~~ 998 (1458)
... . .+..++|++|++.+++.+||+||+.++...... . .....+..+.++++++.+|+.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 432 1 234589999999999999999999986431110 0 00112334567889999999877776
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhce
Q 000506 999 MVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1077 (1458)
Q Consensus 999 ~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~ 1077 (1458)
.+ ..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|++. ++.+.||+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 64 479999999999999999999999999999999999999999999999875 899999999986 57788999
Q ss_pred EEEEecCcEEEEeCCCC
Q 000506 1078 LLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1078 vlll~~gG~~~~~G~~~ 1094 (1458)
+++|++ |++++.|+.+
T Consensus 224 i~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPE 239 (255)
T ss_pred EEEEEC-CeEEecCCHH
Confidence 999985 7899988863
No 185
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=8.1e-36 Score=337.55 Aligned_cols=215 Identities=25% Similarity=0.385 Sum_probs=174.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc----cceEEEecCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLHFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 258 (1458)
.++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 46999999999999999999999999999999999999987 9999999998765432 3459999999999999
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||+||+.+.....+... +.+. .. ..+. ......++.+++.+||++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~~-------~~~~---~~-~~~~-------------~~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-------LLLA---RA-RREE-------------REARERAEELLERVGLADLADRPAGE-- 143 (236)
T ss_pred CCHHHHHHHHHhhccccc-------cccc---cc-cccH-------------HHHHHHHHHHHHHcCccchhhCChhh--
Confidence 999999988654321000 0000 00 0000 00111345678899998888887776
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+ .+++.++|+.+++.+++|++++|++
T Consensus 144 ---LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 144 ---LSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RG-ITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999875 34 4566677888899999999999999
Q ss_pred CeEEEEcChhhHH
Q 000506 419 GQIVYQGPREKVL 431 (1458)
Q Consensus 419 G~iv~~G~~~~~~ 431 (1458)
|++++.|+++++.
T Consensus 219 G~i~~~~~~~~~~ 231 (236)
T cd03219 219 GRVIAEGTPDEVR 231 (236)
T ss_pred CEEEeecCHHHhc
Confidence 9999999988763
No 186
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-35 Score=342.58 Aligned_cols=211 Identities=26% Similarity=0.353 Sum_probs=177.5
Q ss_pred cccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-------cceEEEec
Q 000506 178 SKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-------QRTCAYIS 250 (1458)
Q Consensus 178 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~ 250 (1458)
.+.+.+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++
T Consensus 32 ~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~ 108 (269)
T cd03294 32 KKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVF 108 (269)
T ss_pred hhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEe
Confidence 4445677999999999999999999999999999999999999987 9999999998764321 34699999
Q ss_pred CCCCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccc
Q 000506 251 QNDLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICA 330 (1458)
Q Consensus 251 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 330 (1458)
|++.+++.+||+||+.+.....+... .+ ....++.+++.+||++..
T Consensus 109 q~~~~~~~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~ 154 (269)
T cd03294 109 QSFALLPHRTVLENVAFGLEVQGVPR----------AE------------------------REERAAEALELVGLEGWE 154 (269)
T ss_pred cCcccCCCCcHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCHhHh
Confidence 99999999999999988654321100 00 011234578899999888
Q ss_pred cccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhcc
Q 000506 331 DTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLF 410 (1458)
Q Consensus 331 dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~ 410 (1458)
++.+++ |||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++..+ ++++.++|+.+++.+++
T Consensus 155 ~~~~~~-----LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiii~tH~~~~~~~~~ 228 (269)
T cd03294 155 HKYPDE-----LSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQ-KTIVFITHDLDEALRLG 228 (269)
T ss_pred hCCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhc
Confidence 888877 999999999999999999999999999999999999999999999876434 45666778888999999
Q ss_pred CEEEEEcCCeEEEEcChhhHH
Q 000506 411 DNIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 411 D~v~lL~~G~iv~~G~~~~~~ 431 (1458)
|++++|++|++++.|+++++.
T Consensus 229 d~v~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 229 DRIAIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred CEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999988764
No 187
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-36 Score=338.09 Aligned_cols=213 Identities=22% Similarity=0.333 Sum_probs=179.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 478899988763 2469999999999999999999999999999999999876 4789999999876
Q ss_pred Ccc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHc-CCCccccccccCCCCCCCC
Q 000506 935 NQA----TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLV-ELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LS 1009 (1458)
... ..++.++|++|++.+++.+||.||+.++.... ..++..+.++++++.+ ++.+..+..+ ..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQRA-----GTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCch-----hhCC
Confidence 432 23567999999999999999999998864221 1122334567778887 4766555543 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999878999999999986 68889999999985 78999
Q ss_pred eCCCC
Q 000506 1090 AGPLG 1094 (1458)
Q Consensus 1090 ~G~~~ 1094 (1458)
.|+..
T Consensus 218 ~~~~~ 222 (237)
T PRK11614 218 EDTGD 222 (237)
T ss_pred eCCHH
Confidence 99863
No 188
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=345.64 Aligned_cols=219 Identities=25% Similarity=0.320 Sum_probs=181.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+.... ...+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 467888888774110 012459999999999999999999999999999999999887 4799999999875
Q ss_pred Cc-------ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000506 935 NQ-------ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGV 1005 (1458)
Q Consensus 935 ~~-------~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 1005 (1458)
.. ...++.+||++|++. .+..+||.|++.|..... ....++..++++++++.++|. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP----- 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----
Confidence 32 224567999999973 333589999998865432 233455566789999999997 5666664
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.||++++|++ |
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 479999999999999999999999999999999999999999999999877999999999986 57789999999985 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 89998875
No 189
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1e-34 Score=366.26 Aligned_cols=214 Identities=29% Similarity=0.461 Sum_probs=179.4
Q ss_pred CCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECC
Q 000506 852 QPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISG 931 (1458)
Q Consensus 852 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 931 (1458)
.+-.++|+|++|.+.. +...+|+|+|++|+|||.+||+|+||||||||+|+|+|+.+ +.+|+|.+||
T Consensus 468 ~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~dg 534 (709)
T COG2274 468 LQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILLDG 534 (709)
T ss_pred cCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECC
Confidence 3457999999999863 22369999999999999999999999999999999999987 5899999999
Q ss_pred eeCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcC-------CCcccccccc
Q 000506 932 YPKNQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVE-------LEPLTNAMVG 1001 (1458)
Q Consensus 932 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-------L~~~~~~~vg 1001 (1458)
++.++ ..+|+.+|||+||+.++. -|++||+.++. .+.+.++ +.++++..| +..-.|+.+|
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e~----i~~A~~~ag~~~fI~~lP~gy~t~v~ 604 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDEE----IIEAAQLAGAHEFIENLPMGYDTPVG 604 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHHH----HHHHHHHhCcHHHHHhcccccccccc
Confidence 98643 568899999999998874 69999998753 2233222 333333333 3344577887
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEE
Q 000506 1002 LPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1081 (1458)
Q Consensus 1002 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll 1081 (1458)
..| .+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|+++. +|+|+|+++|+++ ..+.+|++++|
T Consensus 605 E~G-~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIiVl 680 (709)
T COG2274 605 EGG-ANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRIIVL 680 (709)
T ss_pred cCC-CCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEEEc
Confidence 544 5899999999999999999999999999999999999999999999985 5799999999985 67899999999
Q ss_pred ecCcEEEEeCCC
Q 000506 1082 KRGGQVIYAGPL 1093 (1458)
Q Consensus 1082 ~~gG~~~~~G~~ 1093 (1458)
++ |+++..|+.
T Consensus 681 ~~-Gkiv~~gs~ 691 (709)
T COG2274 681 DQ-GKIVEQGSH 691 (709)
T ss_pred cC-CceeccCCH
Confidence 85 899999996
No 190
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=337.12 Aligned_cols=214 Identities=25% Similarity=0.360 Sum_probs=181.1
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 66 (242)
T PRK11124 2 SIQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHF 66 (242)
T ss_pred EEEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEec
Confidence 367888888763 2459999999999999999999999999999999999876 4789999999875
Q ss_pred C---------cccccceEEEEccCCCCCCCCCHHHHHHHHH-hhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000506 935 N---------QATFARVSGYCEQNDIHSPHVTVYESLLFSA-WLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPG 1004 (1458)
Q Consensus 935 ~---------~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~-~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1004 (1458)
. ....++.++|++|++.+++.+||.||+.+.. ... ....++..+.++++++.+|+.+..++.+
T Consensus 67 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 139 (242)
T PRK11124 67 DFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP---- 139 (242)
T ss_pred ccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh----
Confidence 2 0123567999999999999999999997532 221 1223344567889999999988777664
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+
T Consensus 140 -~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~- 216 (242)
T PRK11124 140 -LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN- 216 (242)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999999877999999999986 57778999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 217 g~i~~~~~~ 225 (242)
T PRK11124 217 GHIVEQGDA 225 (242)
T ss_pred CEEEEeCCH
Confidence 789998875
No 191
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-36 Score=343.59 Aligned_cols=213 Identities=24% Similarity=0.351 Sum_probs=180.5
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++ +++.+|+|||++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 56788887663 12459999999999999999999999999999999999876 47899999999764
Q ss_pred c----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 936 Q----ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 936 ~----~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
. ...++.+||++|++. .+...||.||+.+..... ..+.++.++.++++++.++|.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 234567999999975 366789999998865322 2344455567899999999988877764 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
|||||++||+||+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|++. ++ +.+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 45 67999999985 789999
Q ss_pred CCC
Q 000506 1091 GPL 1093 (1458)
Q Consensus 1091 G~~ 1093 (1458)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 885
No 192
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=336.41 Aligned_cols=210 Identities=30% Similarity=0.437 Sum_probs=173.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCCH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMTV 261 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 261 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 46999999999999999999999999999999999999987 9999999998754332 4579999999999989999
Q ss_pred HHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCC
Q 000506 262 RETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRG 341 (1458)
Q Consensus 262 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 341 (1458)
+||+.++....+...+.+ .. + ....++.+++.+||++..++.+++
T Consensus 92 ~e~l~~~~~~~~~~~~~~------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (239)
T cd03296 92 FDNVAFGLRVKPRSERPP------EA----------E--------------IRAKVHELLKLVQLDWLADRYPAQ----- 136 (239)
T ss_pred HHHHhhhhhhccccccCC------HH----------H--------------HHHHHHHHHHHcCChhhhhcChhh-----
Confidence 999988643221100000 00 0 011234578899998888888776
Q ss_pred CChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeE
Q 000506 342 VSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQI 421 (1458)
Q Consensus 342 LSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~i 421 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELH-VTTVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 999999999999999999999999999999999999999999999976434 4555667778889999999999999999
Q ss_pred EEEcChhhHH
Q 000506 422 VYQGPREKVL 431 (1458)
Q Consensus 422 v~~G~~~~~~ 431 (1458)
++.|+++++.
T Consensus 216 ~~~~~~~~~~ 225 (239)
T cd03296 216 EQVGTPDEVY 225 (239)
T ss_pred EEecCHHHHh
Confidence 9999987763
No 193
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.5e-35 Score=336.62 Aligned_cols=215 Identities=25% Similarity=0.347 Sum_probs=179.6
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++ .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 57788877663 2469999999999999999999999999999999999876 47899999998754
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC-----CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000506 936 QA----TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS-----SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
.. ..++.++|++|++.+++.+||+||+.+....... .....++.+++++++++.+++.+..+..+ +
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----G 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 21 1235699999999999999999999886432100 00112334567899999999988777664 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999875 799999999986 57788999999985 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 8888875
No 194
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.4e-35 Score=338.84 Aligned_cols=213 Identities=24% Similarity=0.323 Sum_probs=180.7
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.+. .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 66 (252)
T TIGR03005 2 RFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYH 66 (252)
T ss_pred EEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5778887763 2469999999999999999999999999999999999876 478999999987532
Q ss_pred ----------------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccc
Q 000506 937 ----------------ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMV 1000 (1458)
Q Consensus 937 ----------------~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v 1000 (1458)
...++.++|++|++.+++..||.||+.++.... .....++..+.++++++.+++.+..+..+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~ 144 (252)
T TIGR03005 67 MPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHMP 144 (252)
T ss_pred cccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcCh
Confidence 124567999999999999999999998753211 12233445567889999999987776654
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEE
Q 000506 1001 GLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELL 1079 (1458)
Q Consensus 1001 g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vl 1079 (1458)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++...+|+++
T Consensus 145 -----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~ 218 (252)
T TIGR03005 145 -----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVC 218 (252)
T ss_pred -----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEE
Confidence 479999999999999999999999999999999999999999999999775 899999999986 5778899999
Q ss_pred EEecCcEEEEeCCC
Q 000506 1080 LMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1080 ll~~gG~~~~~G~~ 1093 (1458)
+|++ |++++.|+.
T Consensus 219 ~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 219 FFDK-GRIVEQGKP 231 (252)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 789988875
No 195
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.1e-35 Score=335.59 Aligned_cols=205 Identities=25% Similarity=0.379 Sum_probs=173.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc----cceEEEecCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLHFG 257 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 257 (1458)
.+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (232)
T cd03218 12 KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFR 88 (232)
T ss_pred CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccc
Confidence 346999999999999999999999999999999999999987 9999999998754332 246999999999999
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCc
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQ 337 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 337 (1458)
.+||+||+.+.....+.. +.+ ....++.+++.+||++..++.+++
T Consensus 89 ~~tv~~~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~- 133 (232)
T cd03218 89 KLTVEENILAVLEIRGLS----------KKE------------------------REEKLEELLEEFHITHLRKSKASS- 133 (232)
T ss_pred cCcHHHHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCChhhhhCChhh-
Confidence 999999998754322110 000 011235578899999888888776
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+ ++++.++|+.+++.+++|+|++|+
T Consensus 134 ----LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~ 207 (232)
T cd03218 134 ----LSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-RG-IGVLITDHNVRETLSITDRAYIIY 207 (232)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875 24 456667788889999999999999
Q ss_pred CCeEEEEcChhhH
Q 000506 418 EGQIVYQGPREKV 430 (1458)
Q Consensus 418 ~G~iv~~G~~~~~ 430 (1458)
+|++++.|+.+++
T Consensus 208 ~G~i~~~~~~~~~ 220 (232)
T cd03218 208 EGKVLAEGTPEEI 220 (232)
T ss_pred CCeEEEEeCHHHh
Confidence 9999999998775
No 196
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=354.95 Aligned_cols=202 Identities=26% Similarity=0.337 Sum_probs=176.0
Q ss_pred cceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc---c----ccceEEEEccCCCC
Q 000506 880 RLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA---T----FARVSGYCEQNDIH 952 (1458)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~~ 952 (1458)
...+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... . .++.+|||+|+..+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 3458999999999999999999999999999999999886 4789999999986431 1 13579999999999
Q ss_pred CCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000506 953 SPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMD 1032 (1458)
Q Consensus 953 ~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1032 (1458)
++.+||+||+.|....+ ..+.++..++++++++.++|.+..++.+ +.||||||||++|||||+.+|++||||
T Consensus 118 ~~~~Tv~enl~~~~~~~---~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELA---GINAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 99999999999876543 2234455567899999999998877764 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1033 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1033 EPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
|||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999975 4899999999986 57788999999985 789988875
No 197
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-35 Score=337.43 Aligned_cols=217 Identities=24% Similarity=0.288 Sum_probs=180.0
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14247 3 KIEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDG 69 (250)
T ss_pred eEEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECC
Confidence 367888887763 245899999999999999999999999999999999987531 3689999999
Q ss_pred eeCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccCCC
Q 000506 932 YPKNQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGLPG 1004 (1458)
Q Consensus 932 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~~ 1004 (1458)
.+... ...++.+||++|++.+++.+||.||+.+....+.. ....++..+.++++++.++|.+ ..++.
T Consensus 70 ~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~----- 143 (250)
T PRK14247 70 QDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP----- 143 (250)
T ss_pred EECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----
Confidence 87642 23456799999999888999999999886543211 1123344567889999999864 23433
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
+..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. ++.+.+|++++|++
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~- 220 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK- 220 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 357999999999999999999999999999999999999999999999864 899999999986 57788999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|+++..|+.
T Consensus 221 G~i~~~g~~ 229 (250)
T PRK14247 221 GQIVEWGPT 229 (250)
T ss_pred CeEEEECCH
Confidence 789888875
No 198
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=334.93 Aligned_cols=205 Identities=29% Similarity=0.376 Sum_probs=173.2
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCCCCCC
Q 000506 184 QILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQNDLHFG 257 (1458)
Q Consensus 184 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 257 (1458)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999987 999999999876432 1457999999999999
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCc
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQ 337 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 337 (1458)
.+||+||+.+.....+... .+ ....++.+++.+||++..++.+.+
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~- 140 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------AE------------------------IEERVLELLELVGLEDKADAYPAQ- 140 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHCCChhhhhcChhh-
Confidence 9999999988644221100 00 011234578899999888887766
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ ++++.++|+.+++.+++|++++|+
T Consensus 141 ----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 141 ----LSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELG-LTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999876434 456666777889999999999999
Q ss_pred CCeEEEEcChhhHH
Q 000506 418 EGQIVYQGPREKVL 431 (1458)
Q Consensus 418 ~G~iv~~G~~~~~~ 431 (1458)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987753
No 199
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.6e-35 Score=336.69 Aligned_cols=218 Identities=23% Similarity=0.283 Sum_probs=176.8
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~ 68 (243)
T TIGR01978 2 KIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLE 68 (243)
T ss_pred eEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCC
Confidence 5678877663 246999999999999999999999999999999999984211578999999987643
Q ss_pred c---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCC----CCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCC
Q 000506 937 A---T-FARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSS----DIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDG 1007 (1458)
Q Consensus 937 ~---~-~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~----~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~ 1007 (1458)
. . .+..++|++|++.+++.+|++|++.+........ ..+.++..+.++++++.++|. +..+..++ ..
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~ 144 (243)
T TIGR01978 69 LEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EG 144 (243)
T ss_pred CCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cC
Confidence 1 1 2334899999999999999999998764322110 112233345788999999997 45555432 24
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-hceEEEEecCcE
Q 000506 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLMKRGGQ 1086 (1458)
Q Consensus 1008 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~-~D~vlll~~gG~ 1086 (1458)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+... +|++++|++ |+
T Consensus 145 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~ 222 (243)
T TIGR01978 145 FSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GR 222 (243)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877999999999986 46666 799999985 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
+++.|+.
T Consensus 223 i~~~g~~ 229 (243)
T TIGR01978 223 IVKSGDV 229 (243)
T ss_pred EEEecCH
Confidence 9988875
No 200
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=337.89 Aligned_cols=215 Identities=22% Similarity=0.257 Sum_probs=177.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 588999988763 245899999999999999999999999999999999987632 2589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC----ccccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE----PLTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 1002 (1458)
.+... ...++.++|++|++..++ .||+||+.+....+. ....++.++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87532 234567999999988774 899999988654321 112333456688899999874 334443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
++.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999996 4799999999986 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 789988875
No 201
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=337.88 Aligned_cols=217 Identities=24% Similarity=0.288 Sum_probs=179.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 478899988763 245999999999999999999999999999999999987642 3589999999
Q ss_pred eeCC-----cccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000506 932 YPKN-----QATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1458)
.+.. ...+++.++|++|++.+++.+||.||+.+....+.. ..+.++..+.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8763 123456799999999999999999999886543211 1123344456888999999853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999986 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |++++.|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 5 789998875
No 202
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=343.25 Aligned_cols=218 Identities=26% Similarity=0.394 Sum_probs=177.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc-----ccceEEEecCCCC-CC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV-----PQRTCAYISQNDL-HF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 256 (1458)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+|||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999998 999999999886532 2467999999963 33
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc--ccccccc
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD--ICADTMV 334 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~--~~~dt~v 334 (1458)
...||+||+.|.....+.. +.+ ....++.+++.+||+ +..|+.+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~ 142 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------EEE------------------------IENRVKRAMNIVGLDYEDYKDKSP 142 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------HHH------------------------HHHHHHHHHHHcCCCchhhccCCc
Confidence 4579999998864322110 000 111345688999997 5677777
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEE
Q 000506 335 GDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNII 414 (1458)
Q Consensus 335 g~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~ 414 (1458)
.. ||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++++.. +++|+.++|+.+++.+++|+|+
T Consensus 143 ~~-----LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 143 FE-----LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEY-NMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred cc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 66 99999999999999999999999999999999999999999999997643 4566677888899999999999
Q ss_pred EEcCCeEEEEcChhhHHH---HHHhcCCCCCC
Q 000506 415 LLSEGQIVYQGPREKVLE---FFEYMGFKCPD 443 (1458)
Q Consensus 415 lL~~G~iv~~G~~~~~~~---~F~~~G~~~p~ 443 (1458)
+|++|+++++|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988743 23344555443
No 203
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-35 Score=338.01 Aligned_cols=214 Identities=25% Similarity=0.307 Sum_probs=178.2
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.++++|+++.+. ++.+|+|+|++|++||++||+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 588999988663 245899999999999999999999999999999999987531 3689999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1458)
.+... ..+++.+||++|++.+++ .||+||+.+....+ ..+.++..+.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 134567999999988887 89999999875432 1233444556888999999843 33433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++++ |+|||+++|++. ++.+.+|++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999864 899999999986 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 789998875
No 204
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.1e-35 Score=347.37 Aligned_cols=206 Identities=27% Similarity=0.446 Sum_probs=177.9
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc--ccceEEEecCCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV--PQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 259 (1458)
++.+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++.... .++.+||++|++.+++.+
T Consensus 14 ~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~ 90 (301)
T TIGR03522 14 TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDM 90 (301)
T ss_pred CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCC
Confidence 456999999999999999999999999999999999999998 999999999875432 246799999999999999
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||.||+.|.++..+... .+ .....+.+++.+||++..|+.++.
T Consensus 91 tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~--- 133 (301)
T TIGR03522 91 YVREYLQFIAGIYGMKG----------QL------------------------LKQRVEEMIELVGLRPEQHKKIGQ--- 133 (301)
T ss_pred cHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHCCCchHhcCchhh---
Confidence 99999998765433110 00 011235688999999999888877
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ + ++|+.++|..+++.++||+|++|++|
T Consensus 134 --LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiii~sH~l~~~~~~~d~i~~l~~G 208 (301)
T TIGR03522 134 --LSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--D-KTIILSTHIMQEVEAICDRVIIINKG 208 (301)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--C-CEEEEEcCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999853 4 56677788889999999999999999
Q ss_pred eEEEEcChhhHHH
Q 000506 420 QIVYQGPREKVLE 432 (1458)
Q Consensus 420 ~iv~~G~~~~~~~ 432 (1458)
++++.|+.+++..
T Consensus 209 ~i~~~g~~~~~~~ 221 (301)
T TIGR03522 209 KIVADKKLDELSA 221 (301)
T ss_pred EEEEeCCHHHHHH
Confidence 9999999998754
No 205
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=338.64 Aligned_cols=214 Identities=27% Similarity=0.400 Sum_probs=180.5
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++ ++.+|+|+|+++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 67888887763 2469999999999999999999999999999999999876 47899999998754
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 936 Q---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
. ...++.++|++|++.+++.+||+|++.+..... ....++.++.++++++.+++.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 233467999999998888899999998854321 1122333456889999999988777765 4799999
Q ss_pred HHHHHHHHHHh------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1013 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1013 rqRl~ia~aL~------~~p~illLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999997 66999999999986 57779999999985 7
Q ss_pred EEEEeCCCC
Q 000506 1086 QVIYAGPLG 1094 (1458)
Q Consensus 1086 ~~~~~G~~~ 1094 (1458)
++++.|+..
T Consensus 218 ~i~~~~~~~ 226 (258)
T PRK13548 218 RLVADGTPA 226 (258)
T ss_pred EEEeeCCHH
Confidence 888888753
No 206
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.3e-35 Score=332.66 Aligned_cols=203 Identities=28% Similarity=0.420 Sum_probs=169.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc----cceEEEecCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLHFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 258 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 46999999999999999999999999999999999999987 9999999998765332 3569999999999999
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHc-CCcccccccccCc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLL-GLDICADTMVGDQ 337 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~l-gL~~~~dt~vg~~ 337 (1458)
+||+||+.+.....+ . . + .....+.+++.+ ++++..++.+.+
T Consensus 90 ~t~~~~l~~~~~~~~--~-~----~-----------------------------~~~~~~~~l~~~~~l~~~~~~~~~~- 132 (222)
T cd03224 90 LTVEENLLLGAYARR--R-A----K-----------------------------RKARLERVYELFPRLKERRKQLAGT- 132 (222)
T ss_pred CcHHHHHHHHhhhcC--c-h----h-----------------------------HHHHHHHHHHHHHhhhhhhhCchhh-
Confidence 999999988643221 0 0 0 000123355666 466667777766
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+ ++++.++|+.+++.+++|+|++|+
T Consensus 133 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 133 ----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-EG-VTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhccEEEEee
Confidence 999999999999999999999999999999999999999999999875 34 566667788889999999999999
Q ss_pred CCeEEEEcChhhHH
Q 000506 418 EGQIVYQGPREKVL 431 (1458)
Q Consensus 418 ~G~iv~~G~~~~~~ 431 (1458)
+|+++..|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987753
No 207
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=341.79 Aligned_cols=214 Identities=25% Similarity=0.371 Sum_probs=181.7
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
+.++|+++.++. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|++..
T Consensus 4 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 678898887731 2358999999999999999999999999999999999876 47999999998764
Q ss_pred c---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 936 Q---ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
. ...++.+|||+|++. .+...||.|++.+..... ..+.++..+.++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 3 234567999999974 344679999998765322 2344455567899999999988777765 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.||++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999875 899999999986 57789999999985 789999
Q ss_pred CCC
Q 000506 1091 GPL 1093 (1458)
Q Consensus 1091 G~~ 1093 (1458)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 885
No 208
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-35 Score=331.36 Aligned_cols=200 Identities=28% Similarity=0.363 Sum_probs=169.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCCHH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMTVR 262 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 262 (1458)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 56999999999999999999999999999999999999887 9999999998763 346799999999889989999
Q ss_pred HHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCC
Q 000506 263 ETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGV 342 (1458)
Q Consensus 263 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGL 342 (1458)
||+.+.....+... .+ ....++.+++.+||++..++.+++ |
T Consensus 92 e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------AE------------------------ARERAEELLELVGLSGFENAYPHQ-----L 132 (220)
T ss_pred HHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCChhhhhCCccc-----C
Confidence 99988644322100 00 011235578899998888888776 9
Q ss_pred ChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc--CCe
Q 000506 343 SGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS--EGQ 420 (1458)
Q Consensus 343 SGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~--~G~ 420 (1458)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+.+++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETG-KTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 99999999999999999999999999999999999999999999865434 455566777888999999999999 799
Q ss_pred EEEEcCh
Q 000506 421 IVYQGPR 427 (1458)
Q Consensus 421 iv~~G~~ 427 (1458)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988765
No 209
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=9.7e-36 Score=334.85 Aligned_cols=204 Identities=26% Similarity=0.369 Sum_probs=168.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCC-----CCCCCcccEEEECCeecCCcc-----ccceEEEecCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKL-----DDDLKLTGKIKYCGHEFKEFV-----PQRTCAYISQN 252 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~-----~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~ 252 (1458)
+++|+|+|+++++||+++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 46999999999999999999999999999999999999 776 999999999875432 24579999999
Q ss_pred CCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccc
Q 000506 253 DLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADT 332 (1458)
Q Consensus 253 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 332 (1458)
+.++ .+||+||+.++.+..+.... . + ....++.+++.+||++..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~~---------~----------~--------------~~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKLK---------E----------E--------------LDERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCcH---------H----------H--------------HHHHHHHHHHHcCCChHHhc
Confidence 8888 78999999886543211000 0 0 01123457889999877666
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
.+. .+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.+++|+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCE
Confidence 530 134999999999999999999999999999999999999999999999875 3 5666677888899999999
Q ss_pred EEEEcCCeEEEEcChhh
Q 000506 413 IILLSEGQIVYQGPREK 429 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~ 429 (1458)
+++|++|++++.|++++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998764
No 210
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.5e-35 Score=329.99 Aligned_cols=200 Identities=31% Similarity=0.435 Sum_probs=169.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCCH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMTV 261 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 261 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 46999999999999999999999999999999999999987 9999999998754332 3579999999988989999
Q ss_pred HHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCC
Q 000506 262 RETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRG 341 (1458)
Q Consensus 262 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 341 (1458)
+||+.+..+..+... .+ ....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03301 90 YDNIAFGLKLRKVPK----------DE------------------------IDERVREVAELLQIEHLLDRKPKQ----- 130 (213)
T ss_pred HHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCHHHHhCChhh-----
Confidence 999988644321100 00 011235578899999888888877
Q ss_pred CChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeE
Q 000506 342 VSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQI 421 (1458)
Q Consensus 342 LSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~i 421 (1458)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ ++++.++|+.+++.+++|+|++|++|++
T Consensus 131 LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~sH~~~~~~~~~d~i~~l~~g~~ 209 (213)
T cd03301 131 LSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLG-TTTIYVTHDQVEAMTMADRIAVMNDGQI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 999999999999999999999999999999999999999999999976434 4555667778899999999999999999
Q ss_pred EEEc
Q 000506 422 VYQG 425 (1458)
Q Consensus 422 v~~G 425 (1458)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03301 210 QQIG 213 (213)
T ss_pred EecC
Confidence 9876
No 211
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=339.76 Aligned_cols=233 Identities=25% Similarity=0.367 Sum_probs=187.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC-ceeeEEEECCee
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YTEGDISISGYP 933 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1458)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 478889987763 246999999999999999999999999999999999987642 246999999987
Q ss_pred CCc--------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC-----CCCCHHHHHHHHHHHHHHcCCCccccccc
Q 000506 934 KNQ--------ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS-----SDIDSKTRKMFVDEVMDLVELEPLTNAMV 1000 (1458)
Q Consensus 934 ~~~--------~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~v 1000 (1458)
... ...++.++|++|++.+++.+||+|++.+......+ .....++.+++++++++.+++.+..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 12346799999999999999999999875321000 01112334567899999999988777764
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEE
Q 000506 1001 GLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELL 1079 (1458)
Q Consensus 1001 g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vl 1079 (1458)
..||||||||++|||||+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|++. ++.+.+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 479999999999999999999999999999999999999999999999764 899999999986 4778899999
Q ss_pred EEecCcEEEEeCCCCcc-hHHHHHHHHhC
Q 000506 1080 LMKRGGQVIYAGPLGRQ-SQKLVEYFEAV 1107 (1458)
Q Consensus 1080 ll~~gG~~~~~G~~~~~-~~~~~~~f~~~ 1107 (1458)
+|.+ |++++.|+..+. ...+.+.|..+
T Consensus 225 ~l~~-g~i~~~g~~~~~~~~~~~~~~~~~ 252 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQQFDNERFDHLYRSI 252 (262)
T ss_pred EEEC-CEEEEeCCHHHhccHHHHHHHhhh
Confidence 9985 788999886432 22344445443
No 212
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=342.55 Aligned_cols=215 Identities=27% Similarity=0.351 Sum_probs=182.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|++.
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 3788999887631 12459999999999999999999999999999999999977 4799999999986
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQ---ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
.. ...++.+||++|++. .++..||.||+.+..... ..+.++..++++++++.+||.+..++.++ .|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREPH-----RLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCcc-----cCCH
Confidence 43 234567999999974 667789999998865432 23345556678999999999988777654 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ +.+|++++|.+ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999876 899999999986 35 46999999985 78999
Q ss_pred eCCC
Q 000506 1090 AGPL 1093 (1458)
Q Consensus 1090 ~G~~ 1093 (1458)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 9985
No 213
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-36 Score=328.53 Aligned_cols=223 Identities=26% Similarity=0.359 Sum_probs=195.5
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-------cceEEEecCCC
Q 000506 181 RKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-------QRTCAYISQND 253 (1458)
Q Consensus 181 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 253 (1458)
+-..-++|+|++|+.||++.|||-||||||||+++|.++.+|+ +|+|.++|.++..... ++.+++|+|+.
T Consensus 39 g~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~F 115 (386)
T COG4175 39 GLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSF 115 (386)
T ss_pred CcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhh
Confidence 3445689999999999999999999999999999999999998 9999999998876542 46799999999
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTM 333 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 333 (1458)
.++|+.||.||..|+.+.+|.+.. | .+....+.|+..||+...+..
T Consensus 116 aLlPhrtVl~Nv~fGLev~Gv~~~----------e------------------------r~~~a~~~l~~VgL~~~~~~y 161 (386)
T COG4175 116 ALLPHRTVLENVAFGLEVQGVPKA----------E------------------------REERALEALELVGLEGYADKY 161 (386)
T ss_pred ccccchhHhhhhhcceeecCCCHH----------H------------------------HHHHHHHHHHHcCchhhhhcC
Confidence 999999999999999998886431 1 112345579999999999988
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEE
Q 000506 334 VGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNI 413 (1458)
Q Consensus 334 vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v 413 (1458)
+.+ ||||+||||.|||||+.+|+||+||||+|+|||--+.++.+.|.++.+..++ +|+.++|+.+|++++.|||
T Consensus 162 p~e-----LSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~K-TIvFitHDLdEAlriG~rI 235 (386)
T COG4175 162 PNE-----LSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKK-TIVFITHDLDEALRIGDRI 235 (386)
T ss_pred ccc-----ccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCC-eEEEEecCHHHHHhccceE
Confidence 877 9999999999999999999999999999999999999999999999887665 5566889999999999999
Q ss_pred EEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHh
Q 000506 414 ILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEV 454 (1458)
Q Consensus 414 ~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev 454 (1458)
.+|.+|+|+..|+++|++. .|...-+++|..++
T Consensus 236 aimkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 236 AIMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EEecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 9999999999999999974 46666677776654
No 214
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=340.88 Aligned_cols=213 Identities=24% Similarity=0.353 Sum_probs=178.9
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|++..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 56788887763 2459999999999999999999999999999999999876 47899999999863
Q ss_pred c-----ccccceEEEEccCCCC-CCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 936 Q-----ATFARVSGYCEQNDIH-SPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~~-~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
. ...++.+||++|++.. +...|+.|++.+....+ ....++..+.++++++.+++.+..++.+ ..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCC
Confidence 1 1345679999999753 34568999998764332 2233444556889999999988777654 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 57788999999985 78999
Q ss_pred eCCC
Q 000506 1090 AGPL 1093 (1458)
Q Consensus 1090 ~G~~ 1093 (1458)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 8875
No 215
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-35 Score=329.22 Aligned_cols=194 Identities=25% Similarity=0.366 Sum_probs=165.6
Q ss_pred cceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc-cccceEEEEccCCCCCCCCCHHHHHHH
Q 000506 886 DVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA-TFARVSGYCEQNDIHSPHVTVYESLLF 964 (1458)
Q Consensus 886 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTV~e~l~f 964 (1458)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.+||+||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999876 4789999999876432 234679999999999999999999987
Q ss_pred HHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000506 965 SAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1044 (1458)
Q Consensus 965 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1044 (1458)
....+. .. .++.++.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 11 1234456889999999988777764 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1045 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1045 ~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
.+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999999764 899999999986 57788999999985 6777653
No 216
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=337.84 Aligned_cols=217 Identities=26% Similarity=0.360 Sum_probs=181.3
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 67888887663 2469999999999999999999999999999999999876 47899999998753
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 936 Q---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
. ...++.++|++|+..+++.+||.|++.++...... .....+...+.++++++.+++.+..++.+ ..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHH
Confidence 2 23456799999999888889999999875311000 01111233456889999999988777664 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999999877999999999986 67889999999985 7888888
Q ss_pred CCC
Q 000506 1092 PLG 1094 (1458)
Q Consensus 1092 ~~~ 1094 (1458)
+.+
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 764
No 217
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.6e-35 Score=331.55 Aligned_cols=203 Identities=30% Similarity=0.429 Sum_probs=172.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc--cccceEEEecCCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF--VPQRTCAYISQNDLHFGEMT 260 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lT 260 (1458)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 56999999999999999999999999999999999999987 99999999987542 12456999999999898999
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+||+.+..+..+... .+ ....++.+++.+||++..++.+++
T Consensus 92 v~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~---- 133 (220)
T cd03263 92 VREHLRFYARLKGLPK----------SE------------------------IKEEVELLLRVLGLTDKANKRART---- 133 (220)
T ss_pred HHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCHHHHhChhhh----
Confidence 9999988654322110 00 001234578889998888888776
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
|||||||||+||++|+.+|++++|||||+|||+.++.++.+.|+++++ + .+++.++|+.+++.+++|++++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 134 -LSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999864 4 566667788888999999999999999
Q ss_pred EEEEcChhhH
Q 000506 421 IVYQGPREKV 430 (1458)
Q Consensus 421 iv~~G~~~~~ 430 (1458)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 218
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=329.41 Aligned_cols=198 Identities=23% Similarity=0.370 Sum_probs=168.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCCHH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMTVR 262 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 262 (1458)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 46999999999999999999999999999999999999887 9999999987754 2356799999999999999999
Q ss_pred HHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCC
Q 000506 263 ETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGV 342 (1458)
Q Consensus 263 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGL 342 (1458)
||+.+.....+... . + ....++.+++.+||++..++.+.+ |
T Consensus 89 e~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~-----L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------E----------E--------------ARRRIDEWLERLELSEYANKRVEE-----L 129 (210)
T ss_pred HHHHHHHHHcCCCh----------H----------H--------------HHHHHHHHHHHcCChHHHhCcHhh-----C
Confidence 99987644322100 0 0 011235578899998888887766 9
Q ss_pred ChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEE
Q 000506 343 SGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIV 422 (1458)
Q Consensus 343 SGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv 422 (1458)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. + .+++.++|+.+++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~-~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARA-G-KTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-C-CEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999998753 4 46666778888999999999999999998
Q ss_pred EEc
Q 000506 423 YQG 425 (1458)
Q Consensus 423 ~~G 425 (1458)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 764
No 219
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.2e-35 Score=332.62 Aligned_cols=210 Identities=26% Similarity=0.340 Sum_probs=174.8
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (230)
T TIGR03410 2 EVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITK 66 (230)
T ss_pred EEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCC
Confidence 4677777653 2469999999999999999999999999999999999876 478999999987643
Q ss_pred c----cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcC-CCccccccccCCCCCCCCHH
Q 000506 937 A----TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVE-LEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 937 ~----~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~LSgG 1011 (1458)
. ..++.++|++|++.+++.+|++|++.+....+. .. ..+.++++++.++ +.+..++.+ +.||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G 135 (230)
T TIGR03410 67 LPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRRG-----GDLSGG 135 (230)
T ss_pred CCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCCh-----hhCCHH
Confidence 1 124579999999999999999999988654321 11 1234577788776 555555554 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |+++..
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~ 213 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVAS 213 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999998875 899999999986 57778999999985 789999
Q ss_pred CCCC
Q 000506 1091 GPLG 1094 (1458)
Q Consensus 1091 G~~~ 1094 (1458)
|+..
T Consensus 214 ~~~~ 217 (230)
T TIGR03410 214 GAGD 217 (230)
T ss_pred CCHH
Confidence 8864
No 220
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-35 Score=336.45 Aligned_cols=217 Identities=21% Similarity=0.272 Sum_probs=179.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 377889988773 245999999999999999999999999999999999987532 2689999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1458)
.+... ...++.++|++|++.+++.+||+||+.+....+. ..+.++.++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999999999999999988654321 1123444567889999999842 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 357999999999999999999999999999999999999999999999864 689999999986 5778899999997
Q ss_pred c-----CcEEEEeCCC
Q 000506 1083 R-----GGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~-----gG~~~~~G~~ 1093 (1458)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 4799999875
No 221
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-35 Score=324.39 Aligned_cols=196 Identities=32% Similarity=0.604 Sum_probs=164.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC-ceeeEEEECCee
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YTEGDISISGYP 933 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1458)
.++|+|++|.++.+ .+++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 58999999999642 13467999999999999999999999999999999999987632 578999999987
Q ss_pred CCc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 934 KNQ--ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
... ...++.++|++|++.+++.+||+|++.+....+ .+.. +..||||
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234667999999999999999999998754211 2222 3479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678777776654467889999999986 788765
Q ss_pred C
Q 000506 1091 G 1091 (1458)
Q Consensus 1091 G 1091 (1458)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 222
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.5e-35 Score=338.52 Aligned_cols=205 Identities=20% Similarity=0.225 Sum_probs=156.3
Q ss_pred CCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECC
Q 000506 852 QPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISG 931 (1458)
Q Consensus 852 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 931 (1458)
.|..+.+.+|++.++. +.-+++.+++..++.-+..+++|+||+||||+++++.|... +..|.+.+.+
T Consensus 359 ~~p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 3446888888876642 11168999999999999999999999999999999999765 3567766654
Q ss_pred eeCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCH
Q 000506 932 YPKNQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL-TNAMVGLPGVDGLST 1010 (1458)
Q Consensus 932 ~~~~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSg 1010 (1458)
+++++|-.|..+-+-.+.|.+ +.+-..++. ...+ +.+++-+..+||..- +.. .+.+|||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~-vd~~~~~~p--G~~~----ee~r~hl~~~Gl~g~la~~-----si~~LSG 485 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNA-VDFMEKSFP--GKTE----EEIRRHLGSFGLSGELALQ-----SIASLSG 485 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHH-HHHHHHhCC--CCCH----HHHHHHHHhcCCCchhhhc-----cccccCC
Confidence 457899999876555555544 333333332 2222 335677889999753 222 2458999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
|||-||++|.....+|.+|+|||||+.||..+-..+-+.|++. +..|||++|+.+ -+-..|+.+.+.++|...-+.
T Consensus 486 GQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ie 561 (582)
T KOG0062|consen 486 GQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIE 561 (582)
T ss_pred cchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeee
Confidence 9999999999999999999999999999999999999999887 457999999975 367789999999875544455
Q ss_pred CCC
Q 000506 1091 GPL 1093 (1458)
Q Consensus 1091 G~~ 1093 (1458)
|..
T Consensus 562 g~~ 564 (582)
T KOG0062|consen 562 GGI 564 (582)
T ss_pred ccH
Confidence 553
No 223
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=338.84 Aligned_cols=218 Identities=28% Similarity=0.406 Sum_probs=181.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 478999987763 2469999999999999999999999999999999999876 4789999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
.. ..+++.++|++|+..+++.+||.||+.+....... .........+.++++++.+++.+..++.++ .|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVD-----SLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcc-----cCCH
Confidence 32 23456799999998888899999999875321110 001112334568899999999877776654 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999986 57788999999985 78888
Q ss_pred eCCCC
Q 000506 1090 AGPLG 1094 (1458)
Q Consensus 1090 ~G~~~ 1094 (1458)
.|+..
T Consensus 229 ~~~~~ 233 (265)
T PRK10575 229 QGTPA 233 (265)
T ss_pred ecCHH
Confidence 88753
No 224
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-35 Score=334.39 Aligned_cols=213 Identities=26% Similarity=0.368 Sum_probs=172.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQNDLHF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 256 (1458)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999999887 999999999876532 235799999999999
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
+.+||+||+.+...... . .. ..+. +. ... .....++.+++.+||.+..++.+++
T Consensus 91 ~~~tv~~~l~~~~~~~~-~-~~---~~~~------~~-~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (241)
T cd03256 91 ERLSVLENVLSGRLGRR-S-TW---RSLF------GL-FPK--------------EEKQRALAALERVGLLDKAYQRADQ 144 (241)
T ss_pred ccCcHHHHHHhhhcccc-h-hh---hhhc------cc-CcH--------------HHHHHHHHHHHHcCChhhhCCCccc
Confidence 99999999987532110 0 00 0000 00 000 0011234578899998877777766
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|++++|
T Consensus 145 -----LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 145 -----LSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEG-ITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999876434 45666778888999999999999
Q ss_pred cCCeEEEEcChhhH
Q 000506 417 SEGQIVYQGPREKV 430 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~ 430 (1458)
++|++++.|+++++
T Consensus 219 ~~G~i~~~~~~~~~ 232 (241)
T cd03256 219 KDGRIVFDGPPAEL 232 (241)
T ss_pred ECCEEEeecCHHHh
Confidence 99999999998875
No 225
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.2e-35 Score=337.02 Aligned_cols=223 Identities=24% Similarity=0.338 Sum_probs=180.7
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
+.++|+++.++.....+ ..+.+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 67889888774210000 0113569999999999999999999999999999999999876 47899999998764
Q ss_pred cc------cccceEEEEccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000506 936 QA------TFARVSGYCEQND--IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVD 1006 (1458)
Q Consensus 936 ~~------~~~~~~gyv~Q~~--~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1006 (1458)
.. ..++.++|++|++ .+.+.+||+|++.+..... .....+..++.++++++.+++. +..+..+ .
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKLP-----R 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCCh-----h
Confidence 31 1356799999997 4667899999997754321 1222334456788999999996 5566554 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999865 899999999986 57778999999985 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99999885
No 226
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=351.39 Aligned_cols=208 Identities=23% Similarity=0.323 Sum_probs=177.6
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-------cceEEEecCCC
Q 000506 181 RKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-------QRTCAYISQND 253 (1458)
Q Consensus 181 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 253 (1458)
+...+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++..... ++.++||+|++
T Consensus 39 ~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~ 115 (400)
T PRK10070 39 GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSF 115 (400)
T ss_pred CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCC
Confidence 3456899999999999999999999999999999999999998 9999999998865432 24799999999
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTM 333 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 333 (1458)
.+++.+||+||+.|..+..+... .+ ....++.+++.+||++..++.
T Consensus 116 ~l~~~~Tv~enl~~~~~~~~~~~----------~~------------------------~~~~~~e~L~~~gL~~~~~~~ 161 (400)
T PRK10070 116 ALMPHMTVLDNTAFGMELAGINA----------EE------------------------RREKALDALRQVGLENYAHSY 161 (400)
T ss_pred cCCCCCCHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCChhhhcC
Confidence 99999999999998765432110 00 011235578999999888888
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEE
Q 000506 334 VGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNI 413 (1458)
Q Consensus 334 vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v 413 (1458)
+.+ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.+..+ ++|+.++|+.+++.+++|+|
T Consensus 162 ~~~-----LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g-~TIIivTHd~~~~~~~~Dri 235 (400)
T PRK10070 162 PDE-----LSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQ-RTIVFISHDLDEAMRIGDRI 235 (400)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCC-CeEEEEECCHHHHHHhCCEE
Confidence 876 999999999999999999999999999999999999999999999876444 45666778889999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000506 414 ILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 414 ~lL~~G~iv~~G~~~~~~ 431 (1458)
++|++|++++.|+++++.
T Consensus 236 ~vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 236 AIMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEEECCEEEecCCHHHHH
Confidence 999999999999988864
No 227
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-35 Score=338.87 Aligned_cols=218 Identities=22% Similarity=0.302 Sum_probs=182.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|++.
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 588999998773 2469999999999999999999999999999999999876 4789999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
.. ...++.++|++|++..++..||+|++.+...-..+ .....+..++.++++++.++|.+..++.+ +.|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCh
Confidence 43 23346799999999988899999999875211100 00011234456889999999987777664 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+.+|++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999864 899999999986 58889999999985 78999
Q ss_pred eCCCC
Q 000506 1090 AGPLG 1094 (1458)
Q Consensus 1090 ~G~~~ 1094 (1458)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 98864
No 228
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.6e-35 Score=330.54 Aligned_cols=195 Identities=24% Similarity=0.366 Sum_probs=164.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQNDLHF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 256 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999987 999999999875432 235799999999999
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
+.+||+||+.+..+..+... .+ ....++.+++.+||++..++.+++
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 138 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVPP----------RD------------------------ANERVSAALEKVGLEGKAHALPMQ 138 (216)
T ss_pred ccccHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCChhhhhCChhh
Confidence 99999999988654322100 00 011235578899999888888776
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. + ++|+.++|+.+++.+++|++++|
T Consensus 139 -----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~-~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 139 -----LSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRR-G-TTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998653 4 45666778888999999999999
Q ss_pred cCCeE
Q 000506 417 SEGQI 421 (1458)
Q Consensus 417 ~~G~i 421 (1458)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99974
No 229
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-35 Score=340.43 Aligned_cols=218 Identities=24% Similarity=0.343 Sum_probs=178.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++... ...+++|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 71 (280)
T PRK13649 2 GINLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLI 71 (280)
T ss_pred eEEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEc
Confidence 367889988774110 011359999999999999999999999999999999999876 4789999999875
Q ss_pred Cc-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCC
Q 000506 935 NQ-------ATFARVSGYCEQND--IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-LTNAMVGLPG 1004 (1458)
Q Consensus 935 ~~-------~~~~~~~gyv~Q~~--~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~ 1004 (1458)
.. ..+++.++|++|++ .+++ .||+||+.+..... ....++.++.++++++.++|.+ ..+..+
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---- 143 (280)
T PRK13649 72 TSTSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKNP---- 143 (280)
T ss_pred cccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc----
Confidence 42 23456799999996 3444 69999998764332 1233444566889999999973 455543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++
T Consensus 144 -~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~- 220 (280)
T PRK13649 144 -FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK- 220 (280)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999999877999999999986 57788999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 221 G~i~~~g~~ 229 (280)
T PRK13649 221 GKLVLSGKP 229 (280)
T ss_pred CEEEEeCCH
Confidence 788888875
No 230
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-35 Score=338.98 Aligned_cols=214 Identities=29% Similarity=0.372 Sum_probs=180.0
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
+.++|+++.+. +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 56788887763 12358999999999999999999999999999999999876 47899999998863
Q ss_pred c-----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 936 Q-----ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
. ...++.++|++|++. .+...||.|++.+..... ....++..+.+.++++.++|.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 124567999999973 334579999998764321 2234445567889999999998887765 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999976 57778999999986 78998
Q ss_pred eCCC
Q 000506 1090 AGPL 1093 (1458)
Q Consensus 1090 ~G~~ 1093 (1458)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 8875
No 231
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-35 Score=334.25 Aligned_cols=220 Identities=24% Similarity=0.326 Sum_probs=177.8
Q ss_pred eEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcC---CCceeeEEEEC
Q 000506 854 LSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYTEGDISIS 930 (1458)
Q Consensus 854 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~---~~~~~G~i~i~ 930 (1458)
..++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|... +.+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 3588999998773 2359999999999999999999999999999999999743 11368999999
Q ss_pred CeeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000506 931 GYPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGV 1005 (1458)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1458)
|++... ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++.+....... ..+
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~ 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLH-ESA 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhh-CCc
Confidence 987642 134567999999998887 5999999887543211 1223345668889999998642211111 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 148 ~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G 224 (253)
T PRK14242 148 LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-G 224 (253)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-C
Confidence 5799999999999999999999999999999999999999999999985 4799999999986 57788999999986 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
+++..|+.
T Consensus 225 ~i~~~g~~ 232 (253)
T PRK14242 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 88888874
No 232
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5.5e-35 Score=328.98 Aligned_cols=213 Identities=26% Similarity=0.396 Sum_probs=177.1
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++.. .....+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 47899998876410 011358999999999999999999999999999999999876 4789999999876
Q ss_pred Cccc------c-cceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000506 935 NQAT------F-ARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDG 1007 (1458)
Q Consensus 935 ~~~~------~-~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1007 (1458)
.... . ++.++|++|++.+++.+||.||+.+....+ ....++.+++++++++.+++.+..++.+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4321 1 257999999999989999999998865432 1233445567899999999988777664 47
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1008 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999986 34 56999999985 67
Q ss_pred EEE
Q 000506 1087 VIY 1089 (1458)
Q Consensus 1087 ~~~ 1089 (1458)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 754
No 233
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.4e-35 Score=352.93 Aligned_cols=210 Identities=27% Similarity=0.416 Sum_probs=176.8
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDLHFGE 258 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 258 (1458)
.+++|+|+|+.+++||+++|+||||||||||||+|+|.++|. +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 15 ~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~ 91 (402)
T PRK09536 15 DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFE 91 (402)
T ss_pred CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCC
Confidence 456999999999999999999999999999999999999998 9999999998865432 4679999999998889
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||+||+.++..... + ... .. . ......++.+++.+||.+..|+.+.+
T Consensus 92 ~tv~e~v~~~~~~~~-~-~~~---~~-----------~--------------~~~~~~v~~~le~vgl~~~~~~~~~~-- 139 (402)
T PRK09536 92 FDVRQVVEMGRTPHR-S-RFD---TW-----------T--------------ETDRAAVERAMERTGVAQFADRPVTS-- 139 (402)
T ss_pred CCHHHHHHhccchhc-c-ccc---CC-----------C--------------HHHHHHHHHHHHHcCCchhhcCChhh--
Confidence 999999988532100 0 000 00 0 00112356689999999988888776
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||.|||||+.+|++|+|||||+|||+.++.++.+.|+++++ .+ ++|+.++|+.+++.+++|++++|++
T Consensus 140 ---LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g-~TIIivsHdl~~~~~~adrii~l~~ 214 (402)
T PRK09536 140 ---LSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DG-KTAVAAIHDLDLAARYCDELVLLAD 214 (402)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999985 34 4566677889999999999999999
Q ss_pred CeEEEEcChhhHH
Q 000506 419 GQIVYQGPREKVL 431 (1458)
Q Consensus 419 G~iv~~G~~~~~~ 431 (1458)
|++++.|+++++.
T Consensus 215 G~iv~~G~~~ev~ 227 (402)
T PRK09536 215 GRVRAAGPPADVL 227 (402)
T ss_pred CEEEEecCHHHHh
Confidence 9999999998864
No 234
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4.2e-35 Score=337.61 Aligned_cols=207 Identities=23% Similarity=0.357 Sum_probs=173.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQNDLHF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 256 (1458)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 45999999999999999999999999999999999999987 999999999875432 135699999999999
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
+.+||.||+.+....... ..+.+ ....+..+++.+||++..++.+++
T Consensus 97 ~~~tv~enl~~~~~~~~~---------~~~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~ 143 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---------LPAPL------------------------LHSTVMMKLEAVGLRGAAKLMPSE 143 (269)
T ss_pred CCCCHHHHHHHHHHHccC---------CCHHH------------------------HHHHHHHHHHHcCChhhhhCChhh
Confidence 999999999875321100 00000 011234578899999888888877
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|++++|
T Consensus 144 -----LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 144 -----LSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALG-VTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-cEEEEEecCHHHHHHhhCEEEEE
Confidence 999999999999999999999999999999999999999999999876433 45666778888999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000506 417 SEGQIVYQGPREKVL 431 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~~ 431 (1458)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 235
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3e-35 Score=336.73 Aligned_cols=217 Identities=29% Similarity=0.408 Sum_probs=180.3
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 46778877663 2469999999999999999999999999999999999876 47899999998754
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 936 Q---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
. ...++.++|++|++..++.+||+||+.+....... .....++..++++++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 3 23345799999998878889999999875311100 01111233456889999999988777764 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
||||++||++|+.+|++++|||||+|||+.+...+++.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999987 57789999999985 7888888
Q ss_pred CCC
Q 000506 1092 PLG 1094 (1458)
Q Consensus 1092 ~~~ 1094 (1458)
+..
T Consensus 220 ~~~ 222 (256)
T TIGR03873 220 PPR 222 (256)
T ss_pred CHH
Confidence 763
No 236
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-35 Score=341.36 Aligned_cols=216 Identities=23% Similarity=0.345 Sum_probs=175.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-------cccceEEEecCCC--
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-------VPQRTCAYISQND-- 253 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d-- 253 (1458)
.++|+|||++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++... ..++.++||+|++
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45999999999999999999999999999999999999988 99999999987531 1235799999996
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-ccccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICADT 332 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 332 (1458)
.++ ..||+||+.|+.+..+... .+ ....++.+++.+||. +..++
T Consensus 97 ~l~-~~tv~eni~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~gL~~~~~~~ 141 (290)
T PRK13634 97 QLF-EETVEKDICFGPMNFGVSE----------ED------------------------AKQKAREMIELVGLPEELLAR 141 (290)
T ss_pred hhh-hhhHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHCCCChhhhhC
Confidence 344 5799999998654322110 00 011245688999997 56777
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
.+.+ |||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++++..+ ++|+.++|+.+++.+++|+
T Consensus 142 ~~~~-----LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g-~tviiitHd~~~~~~~~dr 215 (290)
T PRK13634 142 SPFE-----LSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKG-LTTVLVTHSMEDAARYADQ 215 (290)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCE
Confidence 7766 999999999999999999999999999999999999999999999976434 5666678888999999999
Q ss_pred EEEEcCCeEEEEcChhhHHH---HHHhcCCCCC
Q 000506 413 IILLSEGQIVYQGPREKVLE---FFEYMGFKCP 442 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~~---~F~~~G~~~p 442 (1458)
|++|++|+++++|+++++.+ .+...|..+|
T Consensus 216 v~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~ 248 (290)
T PRK13634 216 IVVMHKGTVFLQGTPREIFADPDELEAIGLDLP 248 (290)
T ss_pred EEEEECCEEEEECCHHHHhcCHHHHHHCCCCCC
Confidence 99999999999999888642 2334444444
No 237
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-35 Score=335.54 Aligned_cols=217 Identities=22% Similarity=0.294 Sum_probs=179.1
Q ss_pred CeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcC--C-CceeeEEEE
Q 000506 853 PLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYTEGDISI 929 (1458)
Q Consensus 853 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i 929 (1458)
...++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.+
T Consensus 11 ~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~ 77 (260)
T PRK10744 11 PSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILL 77 (260)
T ss_pred CceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEE
Confidence 34688999998773 2359999999999999999999999999999999999864 1 136899999
Q ss_pred CCeeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccc
Q 000506 930 SGYPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMV 1000 (1458)
Q Consensus 930 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~v 1000 (1458)
+|.+... ..+++.++|++|++.+++ .||+||+.+....+. ..+.++.+++++++++.+++.+ ..+..
T Consensus 78 ~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~- 153 (260)
T PRK10744 78 DGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS- 153 (260)
T ss_pred CCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC-
Confidence 9987632 234578999999988877 899999987653221 1233444567889999999853 23333
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEE
Q 000506 1001 GLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 1080 (1458)
Q Consensus 1001 g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vll 1080 (1458)
...||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. ++.+.+|++++
T Consensus 154 ----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~ 227 (260)
T PRK10744 154 ----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAF 227 (260)
T ss_pred ----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEE
Confidence 35799999999999999999999999999999999999999999999995 4789999999986 57788999999
Q ss_pred EecCcEEEEeCCC
Q 000506 1081 MKRGGQVIYAGPL 1093 (1458)
Q Consensus 1081 l~~gG~~~~~G~~ 1093 (1458)
|++ |+++..|+.
T Consensus 228 l~~-G~i~~~g~~ 239 (260)
T PRK10744 228 MYL-GELIEFGNT 239 (260)
T ss_pred EEC-CEEEEeCCH
Confidence 985 789988875
No 238
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2e-35 Score=327.81 Aligned_cols=196 Identities=27% Similarity=0.414 Sum_probs=167.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-cccceEEEecCCCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-VPQRTCAYISQNDLHFGEMT 260 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lT 260 (1458)
.+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (208)
T cd03268 12 KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLT 88 (208)
T ss_pred CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCc
Confidence 346999999999999999999999999999999999999987 99999999876532 12457999999999999999
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+||+.+.....+. ....++.+++.+||++..++.+++
T Consensus 89 v~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~---- 126 (208)
T cd03268 89 ARENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVKG---- 126 (208)
T ss_pred HHHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHhh----
Confidence 99999875432110 001234578889998888888776
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++ .+ .+++.++|+.+++.+++|++++|++|+
T Consensus 127 -LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~v~~l~~g~ 203 (208)
T cd03268 127 -FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QG-ITVLISSHLLSEIQKVADRIGIINKGK 203 (208)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999875 34 456666788889999999999999999
Q ss_pred EEEEc
Q 000506 421 IVYQG 425 (1458)
Q Consensus 421 iv~~G 425 (1458)
+++.|
T Consensus 204 i~~~g 208 (208)
T cd03268 204 LIEEG 208 (208)
T ss_pred EEecC
Confidence 98765
No 239
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2e-35 Score=326.97 Aligned_cols=192 Identities=26% Similarity=0.361 Sum_probs=162.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCC-CCCCCCH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDL-HFGEMTV 261 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 261 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 56999999999999999999999999999999999999988 9999999998754333567999999974 3446799
Q ss_pred HHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCC
Q 000506 262 RETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRG 341 (1458)
Q Consensus 262 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 341 (1458)
+||+.+.....+ . ....++.+++.+||++..++.+++
T Consensus 90 ~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (205)
T cd03226 90 REELLLGLKELD--A------------------------------------GNEQAETVLKDLDLYALKERHPLS----- 126 (205)
T ss_pred HHHHhhhhhhcC--c------------------------------------cHHHHHHHHHHcCCchhcCCCchh-----
Confidence 999987532110 0 001234578999999888888876
Q ss_pred CChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeE
Q 000506 342 VSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQI 421 (1458)
Q Consensus 342 LSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~i 421 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. + .+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~-~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQ-G-KAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998653 4 4566677888889999999999999997
Q ss_pred E
Q 000506 422 V 422 (1458)
Q Consensus 422 v 422 (1458)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 240
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-35 Score=332.83 Aligned_cols=206 Identities=29% Similarity=0.416 Sum_probs=172.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 259 (1458)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 46999999999999999999999999999999999999987 999999999875432 245799999999999999
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc--cccccccCc
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI--CADTMVGDQ 337 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~--~~dt~vg~~ 337 (1458)
||+||+.+..+..+... .+ ....+..+++.+||++ ..++.+.+
T Consensus 91 tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~l~l~~~~~~~~~~~~- 135 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------EK------------------------IRERADELLALVGLDPAEFADRYPHE- 135 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCCcHHHHhcChhh-
Confidence 99999988643321100 00 0112345788899985 66776665
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++++.++|+.+++.+++|+|++|+
T Consensus 136 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 136 ----LSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELG-KTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999876434 456667777888999999999999
Q ss_pred CCeEEEEcChhhHH
Q 000506 418 EGQIVYQGPREKVL 431 (1458)
Q Consensus 418 ~G~iv~~G~~~~~~ 431 (1458)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999987763
No 241
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=332.61 Aligned_cols=220 Identities=20% Similarity=0.297 Sum_probs=178.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcC--CC-ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 931 (1458)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478889988763 2459999999999999999999999999999999999864 21 2589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
++... ..+++.++|++|+..+++..||+||+.+...... .....+.++.++++++.+++.+....... ..+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcC
Confidence 87632 2346779999999999999999999987643321 11223334568899999998642111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.||++++|.+ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 689999999986 57789999999985 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9998885
No 242
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2.7e-35 Score=331.41 Aligned_cols=198 Identities=24% Similarity=0.361 Sum_probs=168.6
Q ss_pred cccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcccccceEEEEccCCCCCCCCCHHHHHH
Q 000506 884 LRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQATFARVSGYCEQNDIHSPHVTVYESLL 963 (1458)
Q Consensus 884 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~ 963 (1458)
|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999976 47899999998764322 22489999999999999999998
Q ss_pred HHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000506 964 FSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1043 (1458)
Q Consensus 964 f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~ 1043 (1458)
+......+ ....++.++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 76321111 2333444567889999999988777664 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1044 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1044 ~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998765 899999999986 57788999999985 788887764
No 243
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-35 Score=343.57 Aligned_cols=226 Identities=24% Similarity=0.267 Sum_probs=185.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+....... ...+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEc
Confidence 478999998875311000 00123579999999999999999999999999999999999876 4689999999886
Q ss_pred Ccc------cccceEEEEccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCC
Q 000506 935 NQA------TFARVSGYCEQND--IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-LTNAMVGLPGV 1005 (1458)
Q Consensus 935 ~~~------~~~~~~gyv~Q~~--~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 1005 (1458)
... .+++.++||+|++ .+.|.+||.+++....... .....++.++++.++++.+||.+ ..++. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 431 2456799999998 5788999999987754332 12345556678999999999964 45555 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..||||||||++||+||+.+|++|++||||+|||..++..|+++|+++.++ |.|||++||+++ .+.+.+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999765 999999999986 46678999999985
Q ss_pred cEEEEeCCCC
Q 000506 1085 GQVIYAGPLG 1094 (1458)
Q Consensus 1085 G~~~~~G~~~ 1094 (1458)
|++++.|+..
T Consensus 231 G~ive~g~~~ 240 (327)
T PRK11308 231 GRCVEKGTKE 240 (327)
T ss_pred CEEEEECCHH
Confidence 7999999853
No 244
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=341.28 Aligned_cols=220 Identities=25% Similarity=0.362 Sum_probs=178.4
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-------cccceEEEecCCC--C
Q 000506 184 QILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-------VPQRTCAYISQND--L 254 (1458)
Q Consensus 184 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d--~ 254 (1458)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ .
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999998 99999999987521 1245799999986 4
Q ss_pred CCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-cccccc
Q 000506 255 HFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICADTM 333 (1458)
Q Consensus 255 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 333 (1458)
+++ .||.||+.|+.+..+.. +.+ ....+..+++.+||. +..++.
T Consensus 97 l~~-~tv~~~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~L~~~~~~~~ 141 (288)
T PRK13643 97 LFE-ETVLKDVAFGPQNFGIP----------KEK------------------------AEKIAAEKLEMVGLADEFWEKS 141 (288)
T ss_pred ccc-chHHHHHHhHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCCChhhccCC
Confidence 454 69999999875433211 000 011245578889996 466766
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEE
Q 000506 334 VGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNI 413 (1458)
Q Consensus 334 vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v 413 (1458)
+.. ||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++. + .+|+.++|+.+++.+++|+|
T Consensus 142 ~~~-----LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~-g-~til~vtHd~~~~~~~~dri 214 (288)
T PRK13643 142 PFE-----LSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQS-G-QTVVLVTHLMDDVADYADYV 214 (288)
T ss_pred ccc-----CCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHC-C-CEEEEEecCHHHHHHhCCEE
Confidence 665 9999999999999999999999999999999999999999999998752 4 46666778888999999999
Q ss_pred EEEcCCeEEEEcChhhHH---HHHHhcCCCCCCCCCHH
Q 000506 414 ILLSEGQIVYQGPREKVL---EFFEYMGFKCPDRKGVA 448 (1458)
Q Consensus 414 ~lL~~G~iv~~G~~~~~~---~~F~~~G~~~p~~~~~a 448 (1458)
++|++|+++++|+++++. ++++..|+.+|.....+
T Consensus 215 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~ 252 (288)
T PRK13643 215 YLLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFA 252 (288)
T ss_pred EEEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHH
Confidence 999999999999998874 33456677766544333
No 245
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-35 Score=343.14 Aligned_cols=221 Identities=19% Similarity=0.241 Sum_probs=181.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC-C-ceeeEEEECCe
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YTEGDISISGY 932 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~-~-~~~G~i~i~g~ 932 (1458)
.++++|+++.+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++ + +.+|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~ 73 (326)
T PRK11022 3 LLNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQ 73 (326)
T ss_pred eEEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCE
Confidence 36888998877421 1124699999999999999999999999999999999998752 1 46899999999
Q ss_pred eCCcc---cc----cceEEEEccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc---ccccc
Q 000506 933 PKNQA---TF----ARVSGYCEQND--IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL---TNAMV 1000 (1458)
Q Consensus 933 ~~~~~---~~----~~~~gyv~Q~~--~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~v 1000 (1458)
++... .. ++.++||+|++ .+.|.+||.+++........ ....++.++++.++++.+||.+. .+..
T Consensus 74 ~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~- 150 (326)
T PRK11022 74 DLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY- 150 (326)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC-
Confidence 86431 11 24699999998 47889999998876543321 23445566789999999999753 3333
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEE
Q 000506 1001 GLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELL 1079 (1458)
Q Consensus 1001 g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vl 1079 (1458)
+.+|||||||||+||+||+.+|++|++||||+|||+.++..++++|+++.+ .|.|+|++||+++ .+.+.+|+++
T Consensus 151 ----p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~ 225 (326)
T PRK11022 151 ----PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKII 225 (326)
T ss_pred ----chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 458999999999999999999999999999999999999999999999976 4899999999986 4678899999
Q ss_pred EEecCcEEEEeCCC
Q 000506 1080 LMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1080 ll~~gG~~~~~G~~ 1093 (1458)
+|.+ |+++..|+.
T Consensus 226 vm~~-G~ive~g~~ 238 (326)
T PRK11022 226 VMYA-GQVVETGKA 238 (326)
T ss_pred EEEC-CEEEEECCH
Confidence 9985 799999985
No 246
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-35 Score=332.85 Aligned_cols=219 Identities=21% Similarity=0.288 Sum_probs=176.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCc---CCCceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~---~~~~~~G~i~i~g 931 (1458)
.++++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 477889887763 245999999999999999999999999999999999962 2212489999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
++... ...++.++|++|++.+++ .||.||+.+....+.. ...+...+.++++++.+++.+..+.... ..+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLK-ESAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcc
Confidence 87642 234567999999988876 6999999886543311 1223344568899999998643211111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.||++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 5899999999986 57788999999985 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999975
No 247
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.1e-35 Score=349.19 Aligned_cols=204 Identities=23% Similarity=0.337 Sum_probs=177.6
Q ss_pred ccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCee----CCc---cc---c-cceEEEEc
Q 000506 879 DRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYP----KNQ---AT---F-ARVSGYCE 947 (1458)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~----~~~---~~---~-~~~~gyv~ 947 (1458)
+...+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|+++|.+ ... .. . ++.++||+
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 45678999999999999999999999999999999999887 478999999963 211 11 2 25799999
Q ss_pred cCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000506 948 QNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPS 1027 (1458)
Q Consensus 948 Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~ 1027 (1458)
|++.+++.+||+||+.|+...+ ..+.++++++++++++.+||.+..+..++ .||||||||++|||||+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~~-----~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKPG-----ELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999886443 23455666788999999999988887654 799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1028 illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999999765 899999999986 57889999999985 7899999863
No 248
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.3e-35 Score=329.78 Aligned_cols=195 Identities=27% Similarity=0.396 Sum_probs=163.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc-------ccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV-------PQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 56999999999999999999999999999999999999987 999999999876532 13579999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
++.+||+||+.+.....+... .+ ....++.+++.+||++..++.++
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~ 139 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------KE------------------------RRERAEELLERVGLGDRLNHYPS 139 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhhcChh
Confidence 999999999998654322100 00 01123557889999988888877
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
+ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+. +|+.++|+.+++. .+|++++
T Consensus 140 ~-----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~-tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 140 E-----LSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGT-TIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred h-----cCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCC-eEEEEECCHHHHh-hhcEEEE
Confidence 6 9999999999999999999999999999999999999999999999763344 5555666677776 9999999
Q ss_pred EcCCeE
Q 000506 416 LSEGQI 421 (1458)
Q Consensus 416 L~~G~i 421 (1458)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 249
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-35 Score=367.81 Aligned_cols=221 Identities=21% Similarity=0.315 Sum_probs=186.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. ++.+|+|||++|++||+++|+||||||||||+++|+|..++++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 378899988763 2469999999999999999999999999999999999876434689999999876
Q ss_pred Cccc----ccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQAT----FARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~~~----~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
.... .++.+|||+|++.+++.+||+|++.+....+.....+.++..+.++++++.+++.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 4321 24669999999988999999999988654321111223344567899999999988777765 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
|||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|.|||+++|++. ++.+.||++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999878999999999986 57788999999985 789999
Q ss_pred CCCCc
Q 000506 1091 GPLGR 1095 (1458)
Q Consensus 1091 G~~~~ 1095 (1458)
|+...
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 88754
No 250
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=330.58 Aligned_cols=212 Identities=22% Similarity=0.312 Sum_probs=177.8
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++. + ..|||+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 567888887731 1 238999999999999999999999999999999876 47899999998764
Q ss_pred cc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 936 QA-TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 936 ~~-~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
.. ..++.++|++|++.+++.+||.||+.+..... ... .+..++.++++++.+++.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 32 23467999999999999999999998753211 111 2234556899999999988777765 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999986 57788999999985 789999885
Q ss_pred C
Q 000506 1094 G 1094 (1458)
Q Consensus 1094 ~ 1094 (1458)
.
T Consensus 215 ~ 215 (232)
T PRK10771 215 D 215 (232)
T ss_pred H
Confidence 3
No 251
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-35 Score=301.38 Aligned_cols=201 Identities=29% Similarity=0.432 Sum_probs=178.8
Q ss_pred ceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcccccceEEEEccCCCCCCCCCHHH
Q 000506 881 LQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQATFARVSGYCEQNDIHSPHVTVYE 960 (1458)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTV~e 960 (1458)
+.+|+|+|++|.+||.++++||||||||||||+++|..+ +..|+|.+||+++.... ...|.|+|++.++|-+||.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCC--ccceeEeccCccchhhHHHH
Confidence 459999999999999999999999999999999999987 47899999999876433 23589999999999999999
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000506 961 SLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1040 (1458)
Q Consensus 961 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1040 (1458)
|+.|+.+++ .+++.+|.+.+.+.+..+||.+..++.+ -+||||||||+.|||||..+|++|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999999887 5678899999999999999999888775 37999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhhceEEEEecC-cEEEEeCCCC
Q 000506 1041 RAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLMKRG-GQVIYAGPLG 1094 (1458)
Q Consensus 1041 ~~~~~i~~~l~~~~-~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g-G~~~~~G~~~ 1094 (1458)
-+++.++++|-++. ++|+.++++||+.. |..=+++++++|+.| |+|+..-|++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 99999999998875 45999999999876 444467999999843 6888777663
No 252
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=337.23 Aligned_cols=215 Identities=25% Similarity=0.352 Sum_probs=181.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 5889999887631 12468999999999999999999999999999999999876 4789999999986
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQ---ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
.. ..+++.+||++|++. .++.+||+||+.+..... ....++..+.++++++.++|.+..++.+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 235678999999974 567889999998864322 1233444567899999999988777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|+++ ++ ..+|++++|++ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999776 599999999986 34 57999999985 78888
Q ss_pred eCCC
Q 000506 1090 AGPL 1093 (1458)
Q Consensus 1090 ~G~~ 1093 (1458)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 253
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=5.1e-35 Score=347.39 Aligned_cols=210 Identities=24% Similarity=0.317 Sum_probs=178.2
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCe----ecCCccc-------cceEE
Q 000506 179 KKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGH----EFKEFVP-------QRTCA 247 (1458)
Q Consensus 179 ~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~----~~~~~~~-------~~~~~ 247 (1458)
+.+...+|+|+|++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+ ++..... ++.++
T Consensus 33 ~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~ 109 (382)
T TIGR03415 33 ETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVS 109 (382)
T ss_pred hhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEE
Confidence 345677999999999999999999999999999999999999998 999999996 3332211 24699
Q ss_pred EecCCCCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc
Q 000506 248 YISQNDLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD 327 (1458)
Q Consensus 248 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~ 327 (1458)
||+|++.+++.+||+||+.|+....+... .+ ....++.+++.+||+
T Consensus 110 ~vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------~~------------------------~~~~a~e~le~vgL~ 155 (382)
T TIGR03415 110 MVFQKFALMPWLTVEENVAFGLEMQGMPE----------AE------------------------RRKRVDEQLELVGLA 155 (382)
T ss_pred EEECCCcCCCCCcHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCc
Confidence 99999999999999999998765432210 00 011245578999999
Q ss_pred ccccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHH
Q 000506 328 ICADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAY 407 (1458)
Q Consensus 328 ~~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~ 407 (1458)
+..|+.+++ |||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+..+ .+++.++|+.+++.
T Consensus 156 ~~~~~~~~~-----LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~-~TII~iTHdl~e~~ 229 (382)
T TIGR03415 156 QWADKKPGE-----LSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLN-KTIIFVSHDLDEAL 229 (382)
T ss_pred hhhcCChhh-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHH
Confidence 988888877 999999999999999999999999999999999999999999999976444 56666778899999
Q ss_pred hccCEEEEEcCCeEEEEcChhhHH
Q 000506 408 DLFDNIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 408 ~~~D~v~lL~~G~iv~~G~~~~~~ 431 (1458)
+++|+|++|++|+++..|+++++.
T Consensus 230 ~l~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 230 KIGNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred HhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999998875
No 254
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-35 Score=328.64 Aligned_cols=212 Identities=29% Similarity=0.410 Sum_probs=180.9
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
.++|+++.+. .+.+|+|+|++++|||+++|+|+||||||||+++|+|..+ +..|+|.++|++...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 4677777663 2469999999999999999999999999999999999876 478999999987643
Q ss_pred c-cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000506 937 A-TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKR 1015 (1458)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1015 (1458)
. ..++.++|++|++..++.+|++||+.+....+ ....+...+.++++++.+++.+..++.+ ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLK---KLPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 2 23467999999999988999999998865433 1223344556889999999988777664 4799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1016 l~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999865 899999999986 57788999999985 788888864
No 255
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-35 Score=337.00 Aligned_cols=204 Identities=25% Similarity=0.322 Sum_probs=171.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCC-CCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDL-HFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 258 (1458)
.++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 18 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (274)
T PRK13647 18 TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFS 94 (274)
T ss_pred CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhcc
Confidence 35999999999999999999999999999999999999987 9999999998765322 356999999963 4456
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
.||+||+.|+....+.. +. + ....++.+++.+||.+..++.+.+
T Consensus 95 ~tv~e~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~L~~~~~~~~~~-- 138 (274)
T PRK13647 95 STVWDDVAFGPVNMGLD----------KD----------E--------------VERRVEEALKAVRMWDFRDKPPYH-- 138 (274)
T ss_pred CcHHHHHHhhHHHcCCC----------HH----------H--------------HHHHHHHHHHHCCCHHHhcCChhh--
Confidence 89999998864322110 00 0 011245678999999888888877
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. + ++|+.++|+.+++.+++|+|++|++
T Consensus 139 ---LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-g-~tili~tH~~~~~~~~~d~i~~l~~ 213 (274)
T PRK13647 139 ---LSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQ-G-KTVIVATHDVDLAAEWADQVIVLKE 213 (274)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999999753 4 5666677888899999999999999
Q ss_pred CeEEEEcChhhH
Q 000506 419 GQIVYQGPREKV 430 (1458)
Q Consensus 419 G~iv~~G~~~~~ 430 (1458)
|+++++|+++++
T Consensus 214 G~i~~~g~~~~~ 225 (274)
T PRK13647 214 GRVLAEGDKSLL 225 (274)
T ss_pred CEEEEECCHHHh
Confidence 999999998654
No 256
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.9e-35 Score=331.96 Aligned_cols=205 Identities=22% Similarity=0.351 Sum_probs=172.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-----cccceEEEecCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLHFG 257 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 257 (1458)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 46999999999999999999999999999999999999987 99999999987642 12457999999999999
Q ss_pred CCCHHHHHHHhhhh-ccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 258 EMTVRETMDFSGRC-LGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
.+||+||+.+.... .+.. +.+ ....++.+++.+||++..|..+.+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~ 136 (240)
T PRK09493 91 HLTALENVMFGPLRVRGAS----------KEE------------------------AEKQARELLAKVGLAERAHHYPSE 136 (240)
T ss_pred CCcHHHHHHhHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCChHHHhcChhh
Confidence 99999999875321 1100 000 011235578899998877877766
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++. + ++++.++|+.+++.+++|++++|
T Consensus 137 -----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~-~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 137 -----LSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEE-G-MTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998653 4 45666777888999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000506 417 SEGQIVYQGPREKVL 431 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~~ 431 (1458)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 257
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=7.6e-35 Score=343.05 Aligned_cols=224 Identities=19% Similarity=0.260 Sum_probs=183.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC-ceeeEEEECCee
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YTEGDISISGYP 933 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1458)
.++++|++..+... .+...+|+|||++|++||++||+|+||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 58899998877421 12356999999999999999999999999999999999987641 248999999998
Q ss_pred CCcc---c---cc-ceEEEEccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000506 934 KNQA---T---FA-RVSGYCEQND--IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPG 1004 (1458)
Q Consensus 934 ~~~~---~---~~-~~~gyv~Q~~--~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1004 (1458)
+... . ++ +.++||+|++ .+.|.+|+.+++.+...... ....++..+++.++++.++|.+..+. .+ ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~-~~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKR-MK-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHH-hc-CC
Confidence 6431 1 22 4799999998 67899999999987654322 23445556778999999999754322 11 23
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEec
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKR 1083 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~ 1083 (1458)
+.+||||||||++||+||+.+|+||++||||+|||..++..++++|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 5689999999999999999999999999999999999999999999999765 899999999986 46678999999985
Q ss_pred CcEEEEeCCC
Q 000506 1084 GGQVIYAGPL 1093 (1458)
Q Consensus 1084 gG~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 799999985
No 258
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6.9e-35 Score=343.19 Aligned_cols=209 Identities=19% Similarity=0.268 Sum_probs=175.3
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCC--
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQND-- 253 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d-- 253 (1458)
..++++|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.+.. .++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 356999999999999999999999999999999999999987 999999999886543 245799999997
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-ccccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICADT 332 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 332 (1458)
.++|.+||.|++.+..+....+ +.+.+ ....++.+++.+||. +..++
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~--------~~~~~------------------------~~~~~~~~l~~vgl~~~~~~~ 157 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPK--------LSRQE------------------------VKDRVKAMMLKVGLLPNLINR 157 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccC--------CCHHH------------------------HHHHHHHHHHHcCCChHHhcC
Confidence 5888999999998865432100 00000 011234578899994 46677
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
.+.+ |||||||||+||+||+.+|++|++||||+|||..++.++.+.|+++.+.. +++++.++|+...+.+++|+
T Consensus 158 ~p~~-----LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-~~til~iTHdl~~~~~~~dr 231 (331)
T PRK15079 158 YPHE-----FSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREM-GLSLIFIAHDLAVVKHISDR 231 (331)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCE
Confidence 7666 99999999999999999999999999999999999999999999997643 45677788999999999999
Q ss_pred EEEEcCCeEEEEcChhhHH
Q 000506 413 IILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~ 431 (1458)
|++|++|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999998874
No 259
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5.3e-35 Score=333.81 Aligned_cols=205 Identities=25% Similarity=0.346 Sum_probs=171.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-----------cccceEEEecC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-----------VPQRTCAYISQ 251 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-----------~~~~~~~yv~Q 251 (1458)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q 92 (250)
T PRK11264 16 QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQ 92 (250)
T ss_pred eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEec
Confidence 46999999999999999999999999999999999999887 99999999987532 12457999999
Q ss_pred CCCCCCCCCHHHHHHHhhhh-ccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccc
Q 000506 252 NDLHFGEMTVRETMDFSGRC-LGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICA 330 (1458)
Q Consensus 252 ~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 330 (1458)
++.+++.+||+||+.++... .+.. .. .....++.+++.+||++..
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~ 138 (250)
T PRK11264 93 NFNLFPHRTVLENIIEGPVIVKGEP----------KE------------------------EATARARELLAKVGLAGKE 138 (250)
T ss_pred CcccCCCCCHHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCcchh
Confidence 99999999999999875321 1100 00 0011234578889998877
Q ss_pred cccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhcc
Q 000506 331 DTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLF 410 (1458)
Q Consensus 331 dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~ 410 (1458)
|+.+++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+. + .+++.++|+.+++.+++
T Consensus 139 ~~~~~~-----LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~-~tvi~~tH~~~~~~~~~ 211 (250)
T PRK11264 139 TSYPRR-----LSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQE-K-RTMVIVTHEMSFARDVA 211 (250)
T ss_pred hCChhh-----CChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhc-C-CEEEEEeCCHHHHHHhc
Confidence 877766 9999999999999999999999999999999999999999999998753 4 45666778888999999
Q ss_pred CEEEEEcCCeEEEEcChhhHH
Q 000506 411 DNIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 411 D~v~lL~~G~iv~~G~~~~~~ 431 (1458)
|++++|++|++++.|+.+++.
T Consensus 212 d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 212 DRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred CEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999988763
No 260
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-35 Score=334.91 Aligned_cols=216 Identities=23% Similarity=0.272 Sum_probs=178.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC---CceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1458)
.++++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 588999998773 24599999999999999999999999999999999998653 13789999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc----ccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL----TNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~ 1002 (1458)
.+... ..+++.++|++|++..++. ||.||+.+....+.. .....+..+.++++++.+++.+. .+..
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87642 2345679999999888875 999999987543311 11223334568899999999642 2333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 789999999986 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 5 789988874
No 261
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.2e-35 Score=334.19 Aligned_cols=213 Identities=25% Similarity=0.343 Sum_probs=172.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQNDLHF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 256 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 46999999999999999999999999999999999999987 999999999875432 245699999999999
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
+.+||+||+.++..... .... ... +..+ . .....++.+++.+||.+..++.+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~--~~~~---~~~------~~~~-~--------------~~~~~~~~~l~~~~l~~~~~~~~~~ 145 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYK--PTWR---SLL------GRFS-E--------------EDKERALSALERVGLADKAYQRADQ 145 (243)
T ss_pred ccccHHHHHhhcccccc--cchh---hhh------cccc-H--------------HHHHHHHHHHHHcCcHhhhcCCccc
Confidence 99999999987432100 0000 000 0000 0 0011235578899998877777766
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++++.++|+.+++.+++|++++|
T Consensus 146 -----LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 146 -----LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDG-ITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEE
Confidence 999999999999999999999999999999999999999999999876434 45666778888899999999999
Q ss_pred cCCeEEEEcChhhH
Q 000506 417 SEGQIVYQGPREKV 430 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~ 430 (1458)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999998765
No 262
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-35 Score=319.94 Aligned_cols=190 Identities=58% Similarity=0.958 Sum_probs=162.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++.. .+++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|++.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 46789998877421 012469999999999999999999999999999999999753225789999999886
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 935 NQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
. ...++.++|++|++.+++.+||+||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 5 345678999999999999999999998753110 49999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
|++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999987799999999998644678899999998647888865
No 263
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-35 Score=336.04 Aligned_cols=216 Identities=25% Similarity=0.321 Sum_probs=181.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 5889999987631 12358999999999999999999999999999999999876 4789999999876
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQ---ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
.. ...++.++|++|++. +++..|+.+++.+..... ....++..+.++++++.+++.+..+..+ ..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEP-----NALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCc-----ccCCH
Confidence 43 234567999999984 677889999998864322 2234444567889999999988777654 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998765 899999999986 455 4999999985 79999
Q ss_pred eCCCC
Q 000506 1090 AGPLG 1094 (1458)
Q Consensus 1090 ~G~~~ 1094 (1458)
.|+.+
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 98863
No 264
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=5.6e-35 Score=330.18 Aligned_cols=201 Identities=30% Similarity=0.443 Sum_probs=170.7
Q ss_pred ccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc--ccccceEEEEc-cCCCCCCC
Q 000506 879 DRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ--ATFARVSGYCE-QNDIHSPH 955 (1458)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~~ 955 (1458)
+.+++|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 44679999999999999999999999999999999999876 478999999986432 23456799997 55677789
Q ss_pred CCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000506 956 VTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPT 1035 (1458)
Q Consensus 956 lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1035 (1458)
+||+|++.+...++ ....++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998865432 2233444556788999999988877765 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1036 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1036 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999999765 899999999986 57788999999985 7887654
No 265
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.7e-35 Score=328.05 Aligned_cols=198 Identities=32% Similarity=0.470 Sum_probs=167.5
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc--cccceEEEecCCCCCCCCCCH
Q 000506 184 QILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF--VPQRTCAYISQNDLHFGEMTV 261 (1458)
Q Consensus 184 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lTV 261 (1458)
++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++... ..++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999987 99999999987542 124679999999999999999
Q ss_pred HHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCC
Q 000506 262 RETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRG 341 (1458)
Q Consensus 262 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 341 (1458)
+||+.+.....+.. +.+ ....++.+++.+||++..++.+++
T Consensus 96 ~e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------GDE------------------------LTARLEELADRLGMEELLDRRVGG----- 136 (218)
T ss_pred HHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCCHHHHhhhhhh-----
Confidence 99998754322110 000 011235578899999888888777
Q ss_pred CChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeE
Q 000506 342 VSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQI 421 (1458)
Q Consensus 342 LSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~i 421 (1458)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+ .+++.++|+.+++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-LG-KCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999865 24 4566677888899999999999999999
Q ss_pred EEEc
Q 000506 422 VYQG 425 (1458)
Q Consensus 422 v~~G 425 (1458)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8754
No 266
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=336.11 Aligned_cols=219 Identities=26% Similarity=0.385 Sum_probs=179.1
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC------ceeeEEEE
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YTEGDISI 929 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~------~~~G~i~i 929 (1458)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56788887663 246999999999999999999999999999999999987631 12899999
Q ss_pred CCeeCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000506 930 SGYPKNQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGV 1005 (1458)
Q Consensus 930 ~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1458)
+|.+... ..+++.++|++|++..++.+||+||+.+....... .....++..+.++++++.+++.+..++.+
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV----- 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc-----
Confidence 9987642 23456789999998766679999999875321110 11111234456889999999987766654
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhh
Q 000506 1006 DGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 1075 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~---------~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~ 1075 (1458)
..||||||||++||++|+ .+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|+++ ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 479999999999999999 599999999999999999999999999999876 899999999986 577889
Q ss_pred ceEEEEecCcEEEEeCCCC
Q 000506 1076 DELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1076 D~vlll~~gG~~~~~G~~~ 1094 (1458)
|++++|++ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999985 7899998864
No 267
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-35 Score=339.38 Aligned_cols=219 Identities=20% Similarity=0.309 Sum_probs=178.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++... .....+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 478999998774210 001359999999999999999999999999999999999876 4789999999875
Q ss_pred Cc--------ccccceEEEEccCCCC-CCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCC
Q 000506 935 NQ--------ATFARVSGYCEQNDIH-SPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPG 1004 (1458)
Q Consensus 935 ~~--------~~~~~~~gyv~Q~~~~-~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 1004 (1458)
.. ..+++.++|++|++.. ....||+||+.|..... ....++..+.++++++.++|. +..++.+
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~---- 148 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRSP---- 148 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCCh----
Confidence 31 2345679999999742 23469999998864321 223344456688899999994 5666554
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEec
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKR 1083 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~ 1083 (1458)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++
T Consensus 149 -~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 149 -FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 479999999999999999999999999999999999999999999998764 899999999986 57789999999985
Q ss_pred CcEEEEeCCC
Q 000506 1084 GGQVIYAGPL 1093 (1458)
Q Consensus 1084 gG~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 788888875
No 268
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=7.6e-35 Score=324.23 Aligned_cols=198 Identities=24% Similarity=0.315 Sum_probs=168.4
Q ss_pred ecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc-ccccceEEEEccCCCCCCCCCHHHH
Q 000506 883 LLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ-ATFARVSGYCEQNDIHSPHVTVYES 961 (1458)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTV~e~ 961 (1458)
+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|++... ...++.++|++|++.+++.+|++||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 4679999999999999999999999999999999876 478999999987643 2345779999999999999999999
Q ss_pred HHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000506 962 LLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1041 (1458)
Q Consensus 962 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~ 1041 (1458)
+.+...... . ...+.++.++++++.++|.+..++.+ +.||||||||++||++|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987543211 1 11223456788999999988777664 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC
Q 000506 1042 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP 1092 (1458)
Q Consensus 1042 ~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~ 1092 (1458)
++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998765 899999999986 56778999999985 78887764
No 269
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-35 Score=331.39 Aligned_cols=219 Identities=21% Similarity=0.275 Sum_probs=176.9
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC-CceeeEEEECCeeC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYTEGDISISGYPK 934 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~-~~~~G~i~i~g~~~ 934 (1458)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|++.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56788887763 24699999999999999999999999999999999998642 24789999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
.. ..+++.++|++|++.+++ .||+||+.+....+... ...+...++++++++.++|.+....... ...+.||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMI-KNKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcc-cChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHH
Confidence 43 234567999999998887 69999998865433110 1123344567899999999532111111 124579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999986 57788999999985 7999988
Q ss_pred CC
Q 000506 1092 PL 1093 (1458)
Q Consensus 1092 ~~ 1093 (1458)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 74
No 270
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-35 Score=336.73 Aligned_cols=205 Identities=24% Similarity=0.353 Sum_probs=171.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCC-CCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDL-HFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 258 (1458)
..+|+|+|++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++.... .++.++||+|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35999999999999999999999999999999999999998 999999999886432 2457999999973 6777
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||+||+.|+.+..+.. +.+ ....++.+++.+||++..|..+++
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13650 97 ATVEDDVAFGLENKGIP----------HEE------------------------MKERVNEALELVGMQDFKEREPAR-- 140 (279)
T ss_pred ccHHHHHHhhHHhCCCC----------HHH------------------------HHHHHHHHHHHCCCHhHhhCCccc--
Confidence 89999999864432211 000 011245688999999888888876
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++ ..+|+|++|++
T Consensus 141 ---LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 141 ---LSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQ-MTVISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHH-HhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999976434 4555566667777 58999999999
Q ss_pred CeEEEEcChhhHH
Q 000506 419 GQIVYQGPREKVL 431 (1458)
Q Consensus 419 G~iv~~G~~~~~~ 431 (1458)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (279)
T PRK13650 216 GQVESTSTPRELF 228 (279)
T ss_pred CEEEEECCHHHHH
Confidence 9999999998764
No 271
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=333.16 Aligned_cols=224 Identities=22% Similarity=0.266 Sum_probs=182.0
Q ss_pred CCCCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC---CceeeE
Q 000506 850 PFQPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYTEGD 926 (1458)
Q Consensus 850 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~ 926 (1458)
|..+..+.++|+++.++ .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 33345689999998773 24699999999999999999999999999999999998753 147899
Q ss_pred EEECCeeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccc
Q 000506 927 ISISGYPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVG 1001 (1458)
Q Consensus 927 i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg 1001 (1458)
|.++|.+... ...++.++|++|++.+++ .||+||+.+..... . ....++.++.++++++.++|.+..+....
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA-G-VKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc-C-CCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987642 134567999999988877 69999998864321 1 11233445678889999998643222222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEE
Q 000506 1002 LPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1081 (1458)
Q Consensus 1002 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll 1081 (1458)
..+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.++|+++. ++.|||+++|+++ ++.+.||++++|
T Consensus 159 -~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l 235 (267)
T PRK14237 159 -KSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFF 235 (267)
T ss_pred -CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEE
Confidence 2245899999999999999999999999999999999999999999999985 4799999999986 577899999999
Q ss_pred ecCcEEEEeCCC
Q 000506 1082 KRGGQVIYAGPL 1093 (1458)
Q Consensus 1082 ~~gG~~~~~G~~ 1093 (1458)
++ |++++.|+.
T Consensus 236 ~~-G~i~~~g~~ 246 (267)
T PRK14237 236 YL-GDLIEYDKT 246 (267)
T ss_pred EC-CEEEEeCCH
Confidence 85 799999885
No 272
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-35 Score=338.11 Aligned_cols=219 Identities=23% Similarity=0.312 Sum_probs=181.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++|+++.++... ....+.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 478899998874210 0012469999999999999999999999999999999999976 4789999999886
Q ss_pred Cc----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 935 NQ----ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 935 ~~----~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
.. ...++.+||++|++. .+...||.|++.|..... ..+..+.+++++++++.+||.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 234678999999974 233469999998875432 2334455667899999999998888765 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI 1088 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~ 1088 (1458)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 999999999987 454 4999999985 7899
Q ss_pred EeCCC
Q 000506 1089 YAGPL 1093 (1458)
Q Consensus 1089 ~~G~~ 1093 (1458)
+.|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 98875
No 273
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.6e-35 Score=340.64 Aligned_cols=207 Identities=26% Similarity=0.391 Sum_probs=169.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 259 (1458)
++||+++||+|++||-+||+|+|||||||+|++|.++.+ + +|+|.+||.++++... |+.||||||+..+|.+
T Consensus 365 ~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFnd- 439 (591)
T KOG0057|consen 365 RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFND- 439 (591)
T ss_pred CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccch-
Confidence 459999999999999999999999999999999999998 5 8999999999987653 6789999999999976
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||.+|+.++..- ...+++.++|...+ ..|.+ ..|++..+|.||+...
T Consensus 440 TIl~NI~YGn~s-------------------------as~eeV~e~~k~a~-----~hd~i---~~l~~GY~T~VGerG~ 486 (591)
T KOG0057|consen 440 TILYNIKYGNPS-------------------------ASDEEVVEACKRAG-----LHDVI---SRLPDGYQTLVGERGL 486 (591)
T ss_pred hHHHHhhcCCCC-------------------------cCHHHHHHHHHHcC-----cHHHH---HhccccchhhHhhccc
Confidence 999999986321 11112222332221 12322 3488999999998322
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
-|||||||||++|||++.+|+|+++|||||.||+.|..++++.+.+.. .++|+|++.|.. .+...||+|++|++|
T Consensus 487 -~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~--~~rTvI~IvH~l--~ll~~~DkI~~l~nG 561 (591)
T KOG0057|consen 487 -MLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVM--SGRTVIMIVHRL--DLLKDFDKIIVLDNG 561 (591)
T ss_pred -ccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhc--CCCeEEEEEecc--hhHhcCCEEEEEECC
Confidence 289999999999999999999999999999999999999999999843 366777666543 577889999999999
Q ss_pred eEEEEcChhhHHH
Q 000506 420 QIVYQGPREKVLE 432 (1458)
Q Consensus 420 ~iv~~G~~~~~~~ 432 (1458)
++...|+.++++.
T Consensus 562 ~v~e~gth~ell~ 574 (591)
T KOG0057|consen 562 TVKEYGTHSELLA 574 (591)
T ss_pred eeEEeccHHHHhh
Confidence 9999999999875
No 274
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=2.3e-33 Score=374.81 Aligned_cols=135 Identities=21% Similarity=0.279 Sum_probs=108.7
Q ss_pred CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000506 952 HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL-TNAMVGLPGVDGLSTEQRKRLTIAVELV---ANPS 1027 (1458)
Q Consensus 952 ~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~ia~aL~---~~p~ 1027 (1458)
.+...||.|+|.++..-......+.++..+.+ ++++.+||.+. .+..+ ..||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~-----~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPL-----SSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44568999999887542221112233444456 58899999875 56554 479999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe-----cCcEEEEeCCCC
Q 000506 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK-----RGGQVIYAGPLG 1094 (1458)
Q Consensus 1028 illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~-----~gG~~~~~G~~~ 1094 (1458)
+++|||||+|||+.+...+++.|++++++|.|||+++|++. .+ +.+|++++|. .||+++..|+..
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999986 34 8999999995 368999999864
No 275
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=9.3e-35 Score=328.73 Aligned_cols=212 Identities=28% Similarity=0.428 Sum_probs=180.5
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 4677777653 2469999999999999999999999999999999999876 478999999988643
Q ss_pred c-cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000506 937 A-TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKR 1015 (1458)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1015 (1458)
. ..++.++|++|++..++..|+.||+.+....+ ........+.++++++.+++.+..++.+ ..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIR---KHPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 23467999999999999999999998765432 1223334456789999999987777664 4799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1016 l~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998776 899999999986 57788999999985 789998885
No 276
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-35 Score=305.03 Aligned_cols=208 Identities=27% Similarity=0.415 Sum_probs=172.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcccc---ceEEEecCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQ---RTCAYISQNDLHFGEM 259 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 259 (1458)
+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++.+||++++...+. +.-+.++|+..+-...
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 45999999999999999999999999999999999999998 99999999998876653 4568999997664456
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||+|-+.++..-.+.+.. |.+ .....+.+|...++.+.+..-.-
T Consensus 91 tv~eVV~mGr~p~~~g~~-----------------~~e---------------~~~i~~~ala~~d~~~la~R~y~---- 134 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE-----------------PEE---------------DERIAAQALAATDLSGLAGRDYR---- 134 (259)
T ss_pred EHHHHHHhcccccccCCC-----------------chh---------------hHHHHHHHHHHcChhhhhccchh----
Confidence 999999997654322211 000 11234556777788777765443
Q ss_pred CCCChHHHHHHHHHHHHhc------CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEE
Q 000506 340 RGVSGGQKKRVTTGEMLVG------PAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNI 413 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~------~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v 413 (1458)
.|||||||||.+||.|+. ++++||||||||.||......+++..|++++. + ..|+.+.|+..-+..++|+|
T Consensus 135 -~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDri 211 (259)
T COG4559 135 -TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRI 211 (259)
T ss_pred -hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhhee
Confidence 399999999999999963 55699999999999999999999999999985 3 56677889999999999999
Q ss_pred EEEcCCeEEEEcChhhHHH
Q 000506 414 ILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 414 ~lL~~G~iv~~G~~~~~~~ 432 (1458)
++|++||++..|++++++.
T Consensus 212 vll~~Grv~a~g~p~~vlt 230 (259)
T COG4559 212 VLLHQGRVIASGSPQDVLT 230 (259)
T ss_pred eeeeCCeEeecCCHHHhcC
Confidence 9999999999999998853
No 277
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.5e-35 Score=347.12 Aligned_cols=206 Identities=31% Similarity=0.464 Sum_probs=169.9
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCCCCCCCC
Q 000506 184 QILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDLHFGEMT 260 (1458)
Q Consensus 184 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 260 (1458)
++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+.++.. .+++++||+|++.+|+. |
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~g-T 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAG-T 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCccccc-c
Confidence 6999999999999999999999999999999999999998 999999999988765 46889999999999977 9
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
+|||+.++.... .++++.+..+... +.+.+.-+...||.+|+ ..+
T Consensus 411 ireNi~l~~~~~----------------------s~e~i~~al~~a~------------l~~~v~~p~GLdt~ige-~G~ 455 (559)
T COG4988 411 IRENILLARPDA----------------------SDEEIIAALDQAG------------LLEFVPKPDGLDTVIGE-GGA 455 (559)
T ss_pred HHHHhhccCCcC----------------------CHHHHHHHHHHhc------------HHHhhcCCCcccchhcc-CCC
Confidence 999999853210 0112222222211 22222235677899987 567
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
||||||+|||++||||+.+++++++||||++||.+|...|.+.|.++++ ++|+++. +|. .+...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~i-tHr-l~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLVI-THR-LEDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEEE-EcC-hHHHhcCCEEEEecCCc
Confidence 8999999999999999999999999999999999999999999999986 4555554 443 35667789999999999
Q ss_pred EEEEcChhhHHH
Q 000506 421 IVYQGPREKVLE 432 (1458)
Q Consensus 421 iv~~G~~~~~~~ 432 (1458)
++++|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999999854
No 278
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.8e-33 Score=363.60 Aligned_cols=123 Identities=24% Similarity=0.327 Sum_probs=102.8
Q ss_pred CCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCC---CEEE
Q 000506 955 HVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL-TNAMVGLPGVDGLSTEQRKRLTIAVELVANP---SIIF 1030 (1458)
Q Consensus 955 ~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p---~ill 1030 (1458)
.+||.|++.|...+. . .....+.++.+||.+. .+..+ ..||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~~-----~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQPA-----TTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCCc-----ccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378999988865432 1 1224678999999763 45443 479999999999999999999 9999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe-----cCcEEEEeCCC
Q 000506 1031 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK-----RGGQVIYAGPL 1093 (1458)
Q Consensus 1031 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~-----~gG~~~~~G~~ 1093 (1458)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 446899999994 47999999985
No 279
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-35 Score=337.61 Aligned_cols=217 Identities=24% Similarity=0.328 Sum_probs=181.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCc-eeeEEEECCee
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-TEGDISISGYP 933 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~-~~G~i~i~g~~ 933 (1458)
.++++|+++.++. ..+.+|+|||++|++||+++|+||||||||||+++|+|..++.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4789999887631 12459999999999999999999999999999999999876311 13999999998
Q ss_pred CCc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 934 KNQ---ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
... ...++.+||++|++. .++..||+||+.|....+ ..+.++.+++++++++.++|.+..++.+ +.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 643 234567999999974 567899999998764322 2344555667899999999988777664 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI 1088 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~ 1088 (1458)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++ +.||++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 34 57999999985 7899
Q ss_pred EeCCC
Q 000506 1089 YAGPL 1093 (1458)
Q Consensus 1089 ~~G~~ 1093 (1458)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99885
No 280
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1e-34 Score=328.44 Aligned_cols=207 Identities=25% Similarity=0.381 Sum_probs=171.4
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc--cceEEEecCCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP--QRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~l 259 (1458)
++++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+
T Consensus 13 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~ 89 (236)
T TIGR03864 13 ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDL 89 (236)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccC
Confidence 346999999999999999999999999999999999999988 9999999998754321 24799999999888899
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||+||+.+.....+... .+ ....++.+++.+||++..++.+++
T Consensus 90 t~~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~--- 132 (236)
T TIGR03864 90 SVRQNLRYHAALHGLSR----------AE------------------------ARERIAALLARLGLAERADDKVRE--- 132 (236)
T ss_pred cHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCChhhhcCChhh---
Confidence 99999987543221100 00 001234578889999888888876
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+. +++.++|+.+++.. +|++++|++|
T Consensus 133 --LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~-tiii~sH~~~~~~~-~d~i~~l~~G 208 (236)
T TIGR03864 133 --LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGL-SVLWATHLVDEIEA-DDRLVVLHRG 208 (236)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCC-EEEEEecChhhHhh-CCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999998754344 55666677777764 9999999999
Q ss_pred eEEEEcChhhHHH
Q 000506 420 QIVYQGPREKVLE 432 (1458)
Q Consensus 420 ~iv~~G~~~~~~~ 432 (1458)
++++.|+++++.+
T Consensus 209 ~i~~~~~~~~~~~ 221 (236)
T TIGR03864 209 RVLADGAAAELRG 221 (236)
T ss_pred eEEEeCCHHHHHH
Confidence 9999999887653
No 281
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.1e-35 Score=295.04 Aligned_cols=199 Identities=27% Similarity=0.415 Sum_probs=173.4
Q ss_pred cccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc------cc-cceEEEEccCC
Q 000506 878 EDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA------TF-ARVSGYCEQND 950 (1458)
Q Consensus 878 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~-~~~~gyv~Q~~ 950 (1458)
.+...||++|++.|++||-+||+|||||||||||-+|+|+.. +.+|+|.+.|++.... .+ .+.+|+|+|..
T Consensus 20 ~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF 97 (228)
T COG4181 20 EGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSF 97 (228)
T ss_pred CcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEee
Confidence 456789999999999999999999999999999999999987 4899999999986431 23 36799999999
Q ss_pred CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000506 951 IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIF 1030 (1458)
Q Consensus 951 ~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~ill 1030 (1458)
.+.|++|..||+...+.++..... +......+.|+.+||.+..+.+.+ +|||||+|||+||||++..|+|||
T Consensus 98 ~Lip~ltAlENV~lPleL~ge~~~---~~~~~A~~lL~~vGLg~Rl~HyP~-----qLSGGEQQRVAiARAfa~~P~vLf 169 (228)
T COG4181 98 HLIPNLTALENVALPLELRGESSA---DSRAGAKALLEAVGLGKRLTHYPA-----QLSGGEQQRVALARAFAGRPDVLF 169 (228)
T ss_pred eccccchhhhhccchhhhcCCccc---cHHHHHHHHHHHhCcccccccCcc-----ccCchHHHHHHHHHHhcCCCCEEe
Confidence 999999999999998888764322 223457889999999988877754 799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1031 MDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1031 LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
.||||-+||..+...|.+++-.+.++ |.|.|++||||. +...|||.+-|.. |+++.
T Consensus 170 ADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 170 ADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 99999999999999999999988654 999999999985 6788999999985 67653
No 282
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=4.8e-35 Score=324.22 Aligned_cols=189 Identities=23% Similarity=0.375 Sum_probs=163.2
Q ss_pred ceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC---c----ccccceEEEEccCCCCC
Q 000506 881 LQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN---Q----ATFARVSGYCEQNDIHS 953 (1458)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~~~ 953 (1458)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999876 47899999998742 1 12356799999999999
Q ss_pred CCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000506 954 PHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1458)
Q Consensus 954 ~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1033 (1458)
+..||+||+.+....+ .....+..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999999865432 2233444567889999999988777664 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEE
Q 000506 1034 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1081 (1458)
Q Consensus 1034 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll 1081 (1458)
||+|||+.+...+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999999877999999999985 44689999875
No 283
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-35 Score=328.08 Aligned_cols=201 Identities=20% Similarity=0.295 Sum_probs=167.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-------cceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-------QRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999987 9999999998765432 2469999999989
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
++.+||+||+.+.....+... .+ .+..++.+++.+||++..++.++
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~gl~~~~~~~~~ 144 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------AE------------------------INSRALEMLAAVGLEHRANHRPS 144 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhhCChh
Confidence 999999999988644221100 00 01123557889999888887776
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
+ |||||||||+||++++.+|++++|||||+|||+.++.++.+.|+++++..+ ++++.++|+.+++.. +|++++
T Consensus 145 ~-----LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 145 E-----LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQG-TAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCC-CEEEEEeCCHHHHHh-hCEEEE
Confidence 6 999999999999999999999999999999999999999999999875334 455556677777766 589999
Q ss_pred EcCCeEEEEcCh
Q 000506 416 LSEGQIVYQGPR 427 (1458)
Q Consensus 416 L~~G~iv~~G~~ 427 (1458)
|++|+++..|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999988864
No 284
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-35 Score=330.40 Aligned_cols=209 Identities=26% Similarity=0.375 Sum_probs=175.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 477889988763 2458999999999999999999999999999999999876 4789999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCH
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 1010 (1458)
.. ...++.++|++|++.+++ .||+||+.+....+ . ...++++++++.+++. +..++. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 234567999999988776 69999998754321 1 1124578899999996 455554 347999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999774 999999999986 57788999999985 78888
Q ss_pred eCCC
Q 000506 1090 AGPL 1093 (1458)
Q Consensus 1090 ~G~~ 1093 (1458)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8875
No 285
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-35 Score=350.48 Aligned_cols=213 Identities=26% Similarity=0.451 Sum_probs=180.5
Q ss_pred CCeEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECC
Q 000506 852 QPLSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISG 931 (1458)
Q Consensus 852 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 931 (1458)
.++.+..+|++|.++. .+++++|+|++++||+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 3566778899998852 23799999999999999999999999999999999999874 799999999
Q ss_pred eeC---CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc------cccccC
Q 000506 932 YPK---NQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLT------NAMVGL 1002 (1458)
Q Consensus 932 ~~~---~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~------~~~vg~ 1002 (1458)
.+. +...++++++||+|++.+++ -|++||+.++. .+.++ +.+.++++..+|.+.. |+.+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s~----e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDASD----EEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCCH----HHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 875 34568899999999999876 59999998852 12222 3467778877776544 555664
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+.++|||||+|||++||||+.+++++++||||++||.++++.|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 4568999999999999999999999999999999999999999999999976 599999999974 566789999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 5 799999875
No 286
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-34 Score=327.32 Aligned_cols=199 Identities=28% Similarity=0.429 Sum_probs=172.8
Q ss_pred ecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc-cccceEEEEccCCCCCCCCCHHHH
Q 000506 883 LLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA-TFARVSGYCEQNDIHSPHVTVYES 961 (1458)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTV~e~ 961 (1458)
+|+|+|++|+|||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999876 4789999999876532 234679999999999999999999
Q ss_pred HHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000506 962 LLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1041 (1458)
Q Consensus 962 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~ 1041 (1458)
+.+..... .....+..+.++++++.++|.+..++.+ ..||||||||++||+||+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 2233444556788999999988777765 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1042 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1042 ~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998765 999999999986 57788999999985 788888875
No 287
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=341.72 Aligned_cols=223 Identities=17% Similarity=0.214 Sum_probs=180.0
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC--CceeeEEEECCe
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYTEGDISISGY 932 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~~~~G~i~i~g~ 932 (1458)
.++++|+++.+... .+...+|+|||++|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|+
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 37888998877421 1235699999999999999999999999999999999998752 246899999998
Q ss_pred eCCcc---c----ccceEEEEccCCC--CCCCCCHHHHHHHHHhhhcCCC---CCHHHHHHHHHHHHHHcCCCccc---c
Q 000506 933 PKNQA---T----FARVSGYCEQNDI--HSPHVTVYESLLFSAWLRLSSD---IDSKTRKMFVDEVMDLVELEPLT---N 997 (1458)
Q Consensus 933 ~~~~~---~----~~~~~gyv~Q~~~--~~~~lTV~e~l~f~~~lr~~~~---~~~~~~~~~v~~~l~~l~L~~~~---~ 997 (1458)
++... . .++.++||+|++. +.|.+||.+++.+......... ....+.++.+.++++.+||.+.. +
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~ 153 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR 153 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 76431 1 1247999999986 5688999999976432111000 11233456789999999997532 3
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhc
Q 000506 998 AMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFD 1076 (1458)
Q Consensus 998 ~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D 1076 (1458)
.. +..|||||||||+||+||+.+|+||+|||||+|||+.++..++++|+++.++ |.|||++||+++ .+.+.+|
T Consensus 154 ~~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~d 227 (330)
T PRK15093 154 SF-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWAD 227 (330)
T ss_pred CC-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCC
Confidence 33 4589999999999999999999999999999999999999999999999875 999999999986 5778899
Q ss_pred eEEEEecCcEEEEeCCC
Q 000506 1077 ELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1077 ~vlll~~gG~~~~~G~~ 1093 (1458)
++++|.+ |++++.|+.
T Consensus 228 ri~vm~~-G~ive~g~~ 243 (330)
T PRK15093 228 KINVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEEC-CEEEEECCH
Confidence 9999985 799999985
No 288
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=334.09 Aligned_cols=215 Identities=22% Similarity=0.278 Sum_probs=176.7
Q ss_pred eEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC---CceeeEEEEC
Q 000506 854 LSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYTEGDISIS 930 (1458)
Q Consensus 854 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 930 (1458)
..++++|+++.++ .+.+|+|+|++|++||+++|+|||||||||||++|+|..++ .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3589999998773 24699999999999999999999999999999999998642 1378999999
Q ss_pred CeeCC-----cccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccc
Q 000506 931 GYPKN-----QATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVG 1001 (1458)
Q Consensus 931 g~~~~-----~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg 1001 (1458)
|.+.. ....++.++|++|++.+++ .||+||+.+.+..+. .. .+.++.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 98753 1234567999999998887 499999988764331 11 123455778888888743 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEE
Q 000506 1002 LPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1081 (1458)
Q Consensus 1002 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll 1081 (1458)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.||++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 457999999999999999999999999999999999999999999999854 799999999986 688899999999
Q ss_pred ec----------CcEEEEeCCC
Q 000506 1082 KR----------GGQVIYAGPL 1093 (1458)
Q Consensus 1082 ~~----------gG~~~~~G~~ 1093 (1458)
++ +|++++.|+.
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 85 2678888875
No 289
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-35 Score=339.67 Aligned_cols=205 Identities=24% Similarity=0.354 Sum_probs=170.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCC-----------------------
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKE----------------------- 239 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~----------------------- 239 (1458)
.++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|++...
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999998 8999999876421
Q ss_pred ----ccccceEEEecCCC-CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchh
Q 000506 240 ----FVPQRTCAYISQND-LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTS 314 (1458)
Q Consensus 240 ----~~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~ 314 (1458)
...++.+|||+|++ ..+...||+||+.|+....+... .+ ..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~--------------------~~--------------~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK--------------------EE--------------AK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH--------------------HH--------------HH
Confidence 01245799999985 34445799999998654322110 00 01
Q ss_pred hHHHHHHHHcCCc-ccccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCc
Q 000506 315 LATDYVLKLLGLD-ICADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEI 393 (1458)
Q Consensus 315 ~~~~~il~~lgL~-~~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~ 393 (1458)
..++.+++.+||+ +..++.+.+ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~~~~-----LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRSPFE-----LSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCChhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 1245578999996 677877776 999999999999999999999999999999999999999999999874 3 4
Q ss_pred eEEEEEeCChhHHHhccCEEEEEcCCeEEEEcChhhHH
Q 000506 394 TTIVSLLQPAPEAYDLFDNIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 394 t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++|+.++|+.+++.+++|+|++|++|+++++|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 56677788899999999999999999999999998874
No 290
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=329.61 Aligned_cols=206 Identities=21% Similarity=0.339 Sum_probs=171.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc----cceEEEecCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLHFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 258 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999999987 9999999998765332 3569999999999998
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||+||+.+..+...... ..+ .....+.+++.+||++..++.++.
T Consensus 93 ~tv~enl~~~~~~~~~~~---------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-- 137 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDLS---------AEQ------------------------REDRANELMEEFHIEHLRDSMGQS-- 137 (241)
T ss_pred CcHHHHHhhhhhcccccC---------HHH------------------------HHHHHHHHHHHcCCHHHhhcchhh--
Confidence 999999987543211000 000 011234578889998877777766
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.++++++ .+ .+++.++|+.+++.+++|++++|++
T Consensus 138 ---LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 138 ---LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SG-LGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 999999999999999999999999999999999999999999999865 34 4555666778899999999999999
Q ss_pred CeEEEEcChhhHH
Q 000506 419 GQIVYQGPREKVL 431 (1458)
Q Consensus 419 G~iv~~G~~~~~~ 431 (1458)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988763
No 291
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-35 Score=298.25 Aligned_cols=206 Identities=25% Similarity=0.348 Sum_probs=179.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCCHH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMTVR 262 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 262 (1458)
..+|+|+|+.|.+||.++++||||||||||||+++|+.+|. .|+|.+||++++... ..-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCCC--ccceeEeccCccchhhHHH
Confidence 55999999999999999999999999999999999999998 999999999987543 3458999999999999999
Q ss_pred HHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCC
Q 000506 263 ETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGV 342 (1458)
Q Consensus 263 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGL 342 (1458)
||++|+.+++|..+.. |+ ....+.+...||++..+..|-. |
T Consensus 93 dNvafgL~l~Gi~k~~-------R~---------------------------~~a~q~l~~VgL~~~~~~~i~q-----L 133 (259)
T COG4525 93 DNVAFGLQLRGIEKAQ-------RR---------------------------EIAHQMLALVGLEGAEHKYIWQ-----L 133 (259)
T ss_pred HHHHHHHHhcCCCHHH-------HH---------------------------HHHHHHHHHhCcccccccceEe-----e
Confidence 9999999998865321 11 1345678899999988887776 9
Q ss_pred ChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc--CCe
Q 000506 343 SGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS--EGQ 420 (1458)
Q Consensus 343 SGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~--~G~ 420 (1458)
||||||||.|||||..+|+.|+||||+.+||.-|+.++.+.|-++.+..++ -++.++|+.+|+.-+++++++|+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk-~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGK-QVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCC-eEEEEeccHHHHHhhhheeEEecCCCce
Confidence 999999999999999999999999999999999999999999998887654 55668899999999999999998 589
Q ss_pred EEEEcChhhHHHH
Q 000506 421 IVYQGPREKVLEF 433 (1458)
Q Consensus 421 iv~~G~~~~~~~~ 433 (1458)
|+..-+++-...|
T Consensus 213 vv~~~~~df~rR~ 225 (259)
T COG4525 213 VVERLPLDFARRY 225 (259)
T ss_pred eeEecCCCHHHHh
Confidence 9988777644443
No 292
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=339.94 Aligned_cols=216 Identities=21% Similarity=0.373 Sum_probs=174.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-------------------ccc
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-------------------VPQ 243 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------------------~~~ 243 (1458)
+++|+|||++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 45999999999999999999999999999999999999998 99999999887532 124
Q ss_pred ceEEEecCCC--CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHH
Q 000506 244 RTCAYISQND--LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVL 321 (1458)
Q Consensus 244 ~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il 321 (1458)
+.++||+|++ .+++ .||+||+.|+....+.. . . + ....++.++
T Consensus 116 ~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~-~---------~----------~--------------~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVK-K---------S----------E--------------AKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhcccc-chHHHHHHhhHHhcCCC-H---------H----------H--------------HHHHHHHHH
Confidence 6799999996 4665 59999998864322110 0 0 0 011234578
Q ss_pred HHcCCc-ccccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEe
Q 000506 322 KLLGLD-ICADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLL 400 (1458)
Q Consensus 322 ~~lgL~-~~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~ 400 (1458)
+.+||+ +..++.+.+ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.+ .+ ++|++++
T Consensus 161 ~~~gL~~~~~~~~~~~-----LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~g-~Tiiivt 233 (320)
T PRK13631 161 NKMGLDDSYLERSPFG-----LSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-NN-KTVFVIT 233 (320)
T ss_pred HHcCCChhHhcCCccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CC-CEEEEEe
Confidence 899996 566666655 999999999999999999999999999999999999999999999865 24 5566677
Q ss_pred CChhHHHhccCEEEEEcCCeEEEEcChhhHHH---HHHhcCCCCCC
Q 000506 401 QPAPEAYDLFDNIILLSEGQIVYQGPREKVLE---FFEYMGFKCPD 443 (1458)
Q Consensus 401 q~~~~~~~~~D~v~lL~~G~iv~~G~~~~~~~---~F~~~G~~~p~ 443 (1458)
|+.+++.+++|+|++|++|+++..|+++++.+ .++..|+.+|.
T Consensus 234 Hd~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 234 HTMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred cCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 88888999999999999999999999987642 23445555443
No 293
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-35 Score=324.79 Aligned_cols=197 Identities=29% Similarity=0.472 Sum_probs=167.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc--ccceEEEecCCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV--PQRTCAYISQNDLHFGEMT 260 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 260 (1458)
.++|+|+|+++++| +++|+|||||||||||++|+|+++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 46999999999999 99999999999999999999999987 999999998775432 2467999999999999999
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+||+.+.....+... . + ....++.+++.+||++..++.+++
T Consensus 89 v~~~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~---- 130 (211)
T cd03264 89 VREFLDYIAWLKGIPS----------K----------E--------------VKARVDEVLELVNLGDRAKKKIGS---- 130 (211)
T ss_pred HHHHHHHHHHHhCCCH----------H----------H--------------HHHHHHHHHHHCCCHHHHhCchhh----
Confidence 9999988544321100 0 0 011235578899998888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ + ++++.++|+.+++.+++|++++|++|+
T Consensus 131 -LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 131 -LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999864 4 566777888889999999999999999
Q ss_pred EEEEc
Q 000506 421 IVYQG 425 (1458)
Q Consensus 421 iv~~G 425 (1458)
+++.|
T Consensus 207 i~~~g 211 (211)
T cd03264 207 LVFEG 211 (211)
T ss_pred EEecC
Confidence 98765
No 294
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=345.16 Aligned_cols=191 Identities=26% Similarity=0.409 Sum_probs=168.7
Q ss_pred cceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc-------ccccceEEEEccCCCCCCCCCH
Q 000506 886 DVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ-------ATFARVSGYCEQNDIHSPHVTV 958 (1458)
Q Consensus 886 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTV 958 (1458)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.+|||+|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 478999999987532 1245789999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000506 959 YESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1458)
Q Consensus 959 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1038 (1458)
+||+.|+.. ...++.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999988632 112346889999999988877764 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
|+.++..+++.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 214 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPLE 214 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCHH
Confidence 999999999999999876 899999999986 68889999999985 7899998863
No 295
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.3e-34 Score=333.28 Aligned_cols=224 Identities=21% Similarity=0.297 Sum_probs=181.1
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++++..+.. ....+.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 77 (267)
T PRK15112 4 LLEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPL 77 (267)
T ss_pred eEEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 3789999988742100 000112469999999999999999999999999999999999986 4789999999876
Q ss_pred Ccc---cccceEEEEccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCC
Q 000506 935 NQA---TFARVSGYCEQNDI--HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGL 1008 (1458)
Q Consensus 935 ~~~---~~~~~~gyv~Q~~~--~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~L 1008 (1458)
... ..++.++|++|++. +.+.+||.|++.+...... .....+..+.++++++.++|. +..+..+ ..|
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~L 150 (267)
T PRK15112 78 HFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYYP-----HML 150 (267)
T ss_pred CCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcCc-----hhc
Confidence 421 22357999999975 5678899999988654321 223334456788999999994 5555543 479
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEE
Q 000506 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQV 1087 (1458)
Q Consensus 1009 SgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~ 1087 (1458)
|||||||++||++|+.+|+||+|||||+|||+.+...+.+.|++++++ |+|||+++|+++ ++.+.||++++|++ |++
T Consensus 151 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i 228 (267)
T PRK15112 151 APGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEV 228 (267)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999765 899999999986 57778999999985 788
Q ss_pred EEeCCC
Q 000506 1088 IYAGPL 1093 (1458)
Q Consensus 1088 ~~~G~~ 1093 (1458)
++.|+.
T Consensus 229 ~~~~~~ 234 (267)
T PRK15112 229 VERGST 234 (267)
T ss_pred EecCCH
Confidence 888874
No 296
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.2e-34 Score=345.63 Aligned_cols=194 Identities=25% Similarity=0.422 Sum_probs=170.3
Q ss_pred cceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc-------ccccceEEEEccCCCCCCCCCH
Q 000506 886 DVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ-------ATFARVSGYCEQNDIHSPHVTV 958 (1458)
Q Consensus 886 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTV 958 (1458)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 9999999999999999999999999999999876 478999999987632 1245679999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000506 959 YESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1458)
Q Consensus 959 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1038 (1458)
+||+.|+.... ...+.+++++++++.++|.+..++.+ ..|||||||||+|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999865321 12334556899999999998887765 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999876 899999999986 67788999999985 789998875
No 297
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-35 Score=345.99 Aligned_cols=195 Identities=27% Similarity=0.438 Sum_probs=170.4
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-------cccceEEEecCCCCCCCCCC
Q 000506 188 DVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-------VPQRTCAYISQNDLHFGEMT 260 (1458)
Q Consensus 188 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 260 (1458)
|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++... ..++.++||+|++.+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999988 99999999987531 12467999999999999999
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+||+.|+.+. . ....++.+++.+||++..++.+++
T Consensus 93 v~enl~~~~~~-----------~-----------------------------~~~~~~~~l~~~gl~~~~~~~~~~---- 128 (352)
T PRK11144 93 VRGNLRYGMAK-----------S-----------------------------MVAQFDKIVALLGIEPLLDRYPGS---- 128 (352)
T ss_pred HHHHHHhhhhh-----------h-----------------------------hHHHHHHHHHHcCCchhhhCCccc----
Confidence 99999875320 0 001235578999999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+ ++++.++|+.+++.+++|++++|++|+
T Consensus 129 -LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 129 -LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREIN-IPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999999976434 556667888899999999999999999
Q ss_pred EEEEcChhhHH
Q 000506 421 IVYQGPREKVL 431 (1458)
Q Consensus 421 iv~~G~~~~~~ 431 (1458)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999874
No 298
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=329.47 Aligned_cols=215 Identities=24% Similarity=0.288 Sum_probs=175.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcC--CC-ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 931 (1458)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 478899988763 2459999999999999999999999999999999999742 21 2489999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1458)
++... ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87632 234567999999998877 899999988653321 1122334456788899998753 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999986 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 789998875
No 299
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=328.86 Aligned_cols=215 Identities=22% Similarity=0.258 Sum_probs=177.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
-+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 467889887763 245899999999999999999999999999999999986531 2689999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1458)
.+... ...++.++|++|++.+++ .|++||+.|....... ...++..++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 134567999999998887 8999999886543211 123344556788999998853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999876 689999999986 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 789998875
No 300
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-35 Score=328.99 Aligned_cols=203 Identities=29% Similarity=0.440 Sum_probs=167.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc----ccceEEEecCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV----PQRTCAYISQNDLHFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 258 (1458)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 46999999999999999999999999999999999999987 999999999876543 23569999999999998
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHc-CCcccccccccCc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLL-GLDICADTMVGDQ 337 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~l-gL~~~~dt~vg~~ 337 (1458)
+||+||+.++..... . + +. ....+.+++.+ +|.+..++.+..
T Consensus 95 ~tv~~~l~~~~~~~~---~-~---~~-----------------------------~~~~~~~l~~~~~l~~~~~~~~~~- 137 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R-D---QF-----------------------------QERIKWVYELFPRLHERRIQRAGT- 137 (237)
T ss_pred CcHHHHHHHhhhccC---h-h---HH-----------------------------HHHHHHHHHHHHHHHHHHhCchhh-
Confidence 999999987532110 0 0 00 00122345555 466556666655
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. +. +++.++|+.+++.+++|++++|+
T Consensus 138 ----LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~-tiii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 138 ----MSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQ-GM-TIFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHC-CC-EEEEEeCcHHHHHhhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999998753 44 45556788889999999999999
Q ss_pred CCeEEEEcChhhHH
Q 000506 418 EGQIVYQGPREKVL 431 (1458)
Q Consensus 418 ~G~iv~~G~~~~~~ 431 (1458)
+|++++.|+++++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999988764
No 301
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=330.61 Aligned_cols=215 Identities=20% Similarity=0.279 Sum_probs=177.2
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC--C-ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1458)
.+.++|+++.+. .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478999988763 24599999999999999999999999999999999998642 1 2589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc----ccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL----TNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~ 1002 (1458)
++... ...++.+||++|++.+++. ||+||+.+....+. ....++..+.++++++.+++.+. .+..
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--- 152 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ--- 152 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhCC---
Confidence 97632 2345679999999988875 99999988643321 11233445567889999998642 2333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
..+||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 153 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 228 (259)
T PRK14274 153 --ALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY 228 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 799999999986 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |+++..|+.
T Consensus 229 ~-G~i~~~g~~ 238 (259)
T PRK14274 229 M-GELVECNDT 238 (259)
T ss_pred C-CEEEEECCH
Confidence 5 799998875
No 302
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.2e-34 Score=326.75 Aligned_cols=203 Identities=28% Similarity=0.376 Sum_probs=168.8
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc----cceEEEecCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLHFG 257 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 257 (1458)
++++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (230)
T TIGR03410 12 QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFP 88 (230)
T ss_pred CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccC
Confidence 346999999999999999999999999999999999999987 9999999998754322 356999999999999
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcC-CcccccccccC
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLG-LDICADTMVGD 336 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lg-L~~~~dt~vg~ 336 (1458)
.+||+||+.++....+.. . ....+.+++.++ +.+..|+.+++
T Consensus 89 ~~tv~~~l~~~~~~~~~~----------~---------------------------~~~~~~~l~~~~~l~~~~~~~~~~ 131 (230)
T TIGR03410 89 RLTVEENLLTGLAALPRR----------S---------------------------RKIPDEIYELFPVLKEMLGRRGGD 131 (230)
T ss_pred CCcHHHHHHHHHHhcCcc----------h---------------------------HHHHHHHHHHHHhHHHHhhCChhh
Confidence 999999998864321100 0 001233555665 55556666666
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++++.. +++++.++|+.+++.+++|+|++|
T Consensus 132 -----LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l 205 (230)
T TIGR03410 132 -----LSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEG-GMAILLVEQYLDFARELADRYYVM 205 (230)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcC-CcEEEEEeCCHHHHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999987533 355666778888999999999999
Q ss_pred cCCeEEEEcChhhH
Q 000506 417 SEGQIVYQGPREKV 430 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~ 430 (1458)
++|++++.|+.+++
T Consensus 206 ~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 206 ERGRVVASGAGDEL 219 (230)
T ss_pred ECCEEEEECCHHHc
Confidence 99999999998775
No 303
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=329.12 Aligned_cols=219 Identities=20% Similarity=0.278 Sum_probs=175.5
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECCe
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISGY 932 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1458)
-+++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 45777877653 246999999999999999999999999999999999986421 36899999998
Q ss_pred eCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000506 933 PKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDG 1007 (1458)
Q Consensus 933 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1007 (1458)
+... ...++.++|++|++.+++. ||+||+.+....+. .....+..++.++++++.+++.+....... ..+..
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLK-DSAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhh-cChhh
Confidence 7532 1345679999999988875 99999988643321 111223344567889999999753211111 12357
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEE
Q 000506 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQV 1087 (1458)
Q Consensus 1008 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~ 1087 (1458)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999986 57788999999986 789
Q ss_pred EEeCCC
Q 000506 1088 IYAGPL 1093 (1458)
Q Consensus 1088 ~~~G~~ 1093 (1458)
++.|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 888874
No 304
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=362.54 Aligned_cols=219 Identities=26% Similarity=0.360 Sum_probs=185.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++++++ ++.+|+|+|++|++||++||+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 68 (501)
T PRK10762 4 LLQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEV 68 (501)
T ss_pred eEEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEC
Confidence 378899988763 2469999999999999999999999999999999999876 4789999999876
Q ss_pred Ccc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 935 NQA----TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
... ..++.+||++|++.+++.+||+|++.++...+.. ...+.++.+++++++++.++|.+..+..++ .||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 143 (501)
T PRK10762 69 TFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVG-----ELS 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchh-----hCC
Confidence 421 1245799999999899999999999886432211 112233445668899999999988777654 799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|.|||+++|++. ++.+.||++++|++ |+++.
T Consensus 144 gG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (501)
T PRK10762 144 IGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIA 221 (501)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEE
Confidence 99999999999999999999999999999999999999999999878999999999986 57788999999985 78988
Q ss_pred eCCCCc
Q 000506 1090 AGPLGR 1095 (1458)
Q Consensus 1090 ~G~~~~ 1095 (1458)
.|+..+
T Consensus 222 ~~~~~~ 227 (501)
T PRK10762 222 EREVAD 227 (501)
T ss_pred ecCcCc
Confidence 888754
No 305
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=323.81 Aligned_cols=224 Identities=21% Similarity=0.311 Sum_probs=183.0
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcC-C--CceeeEEEECCe
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G--GYTEGDISISGY 932 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~-~--~~~~G~i~i~g~ 932 (1458)
++++|++.++... .+..++++||||++++||++||+|.|||||||+.++|.|..+ + ...+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~---------~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTD---------AGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecC---------CccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 4677887776532 124579999999999999999999999999999999999876 2 256789999999
Q ss_pred eCC---cc---cc-cceEEEEccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCC
Q 000506 933 PKN---QA---TF-ARVSGYCEQNDI--HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLP 1003 (1458)
Q Consensus 933 ~~~---~~---~~-~~~~gyv~Q~~~--~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 1003 (1458)
++. +. .+ -+.++|++|++. +.|..||.+.+.-......... ..++..+++.++|+.+|+.+-.... +.
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~--~~ 149 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRL--KS 149 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHH--hh
Confidence 642 22 12 257999999974 6799999888766554322111 3456677899999999998743222 12
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1004 GVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1004 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
.+.+|||||||||.||.||+.+|++|+.||||++||...+++|+++|+++.+ .|.|+|++|||+. -+.+.||||+||.
T Consensus 150 YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY 228 (316)
T COG0444 150 YPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY 228 (316)
T ss_pred CCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE
Confidence 2568999999999999999999999999999999999999999999999986 5999999999987 4889999999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
. |++++.|+.
T Consensus 229 a-G~iVE~g~~ 238 (316)
T COG0444 229 A-GRIVEEGPV 238 (316)
T ss_pred C-cEEEEeCCH
Confidence 5 899999996
No 306
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.5e-34 Score=324.81 Aligned_cols=204 Identities=33% Similarity=0.523 Sum_probs=166.9
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCcccEEEECCeecCCccccceEEEecCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD---DDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGE 258 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~---~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 258 (1458)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3569999999999999999999999999999999999998 66 99999999987643446679999999999999
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHH-HHHHcCCcccccccccCc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDY-VLKLLGLDICADTMVGDQ 337 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~-il~~lgL~~~~dt~vg~~ 337 (1458)
+||+||+.|+..........+ . . .....+. .++.+++++..++.+++
T Consensus 96 ~tv~enl~~~~~~~~~~~~~~---~----~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~- 143 (226)
T cd03234 96 LTVRETLTYTAILRLPRKSSD---A----I------------------------RKKRVEDVLLRDLALTRIGGNLVKG- 143 (226)
T ss_pred CcHHHHHHHHHHhhcccccch---H----H------------------------HHHHHHHHHHHhhcchhhhcccccC-
Confidence 999999998654322110000 0 0 0001222 67888888777777766
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. +.|++++.|+...++.+++|++++|+
T Consensus 144 ----LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~-~~tiii~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 144 ----ISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARR-NRIVILTIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred ----cCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEecCCCHHHHHhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999998753 55665555554468999999999999
Q ss_pred CCeEEEEc
Q 000506 418 EGQIVYQG 425 (1458)
Q Consensus 418 ~G~iv~~G 425 (1458)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999875
No 307
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.8e-34 Score=328.68 Aligned_cols=207 Identities=25% Similarity=0.379 Sum_probs=170.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD--LKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
..+|+|+|++|++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 93 (247)
T TIGR00972 14 KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNP 93 (247)
T ss_pred eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCccc
Confidence 45999999999999999999999999999999999999763 12389999999987542 124579999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc----cccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD----ICAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 331 (1458)
++ +||+||+.+..+..+.... .+ ....++.+++.+||. +..+
T Consensus 94 ~~-~tv~e~l~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~ 139 (247)
T TIGR00972 94 FP-MSIYDNIAYGPRLHGIKDK---------KE------------------------LDEIVEESLKKAALWDEVKDRLH 139 (247)
T ss_pred CC-CCHHHHHHhHHHhcCCCCH---------HH------------------------HHHHHHHHHHHcCCCcchhhHhh
Confidence 88 9999999886543211000 00 011234578889997 6666
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + .+++.++|+.+++.+++|
T Consensus 140 ~~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d 211 (247)
T TIGR00972 140 DSALG-----LSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISD 211 (247)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCC
Confidence 66665 999999999999999999999999999999999999999999999875 3 456667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|+++++|+++++.
T Consensus 212 ~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 212 RTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988763
No 308
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=327.89 Aligned_cols=215 Identities=22% Similarity=0.305 Sum_probs=176.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367889988763 235999999999999999999999999999999999975421 2589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1458)
.+... ...++.++|++|++.+++ .||+||+.+....+.. .+.++.++.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 234567999999988887 8999999986543211 123344567888899988753 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. ++.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 35799999999999999999999999999999999999999999999985 4899999999976 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 6 788888874
No 309
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.9e-34 Score=315.89 Aligned_cols=190 Identities=51% Similarity=0.871 Sum_probs=163.1
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCc--CCCceeeEEEECCe
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYTEGDISISGY 932 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~--~~~~~~G~i~i~g~ 932 (1458)
.++++|+++.++... ....+.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|+
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 478899998874210 001246999999999999999999999999999999999987 5 57899999999
Q ss_pred eCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 933 PKNQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 933 ~~~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
+......++.++|++|++.+++.+|++|++.+...+. .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8755455678999999999889999999997643110 499999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
|||++||+||+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999877999999999986567788999999985 7887654
No 310
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.1e-34 Score=323.23 Aligned_cols=194 Identities=26% Similarity=0.394 Sum_probs=163.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQNDLHF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 256 (1458)
.++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 46999999999999999999999999999999999999887 999999999876532 235799999999999
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
+.+||+||+.+.....+... + + ....++.+++.+||++..++.+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~--~------------------~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 137 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKKE--R------------------E--------------IQRRVGAALRQVGLEHKADAFPEQ 137 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH--H------------------H--------------HHHHHHHHHHHcCChhhhhCChhh
Confidence 99999999988644321100 0 0 011235578899998877877776
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. + ++++.++|+.+++.+++|++++|
T Consensus 138 -----LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~-~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 138 -----LSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKR-G-TTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred -----CCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHhcCEEEEe
Confidence 9999999999999999999999999999999999999999999998652 4 45666777888999999999999
Q ss_pred cCCe
Q 000506 417 SEGQ 420 (1458)
Q Consensus 417 ~~G~ 420 (1458)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 311
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.9e-34 Score=324.70 Aligned_cols=201 Identities=26% Similarity=0.336 Sum_probs=164.1
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCC--CC
Q 000506 184 QILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQND--LH 255 (1458)
Q Consensus 184 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 255 (1458)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999987 999999999876532 245799999998 46
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-ccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICADTMV 334 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~v 334 (1458)
++.+||+||+.+.....+..... + . .....+.+++.+||. +..+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~---------~----------~-------------~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKK---------E----------A-------------RKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHH---------H----------H-------------HHHHHHHHHHHCCCChhHhhCCc
Confidence 67899999998764432110000 0 0 000113467888985 5667777
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEE
Q 000506 335 GDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNII 414 (1458)
Q Consensus 335 g~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~ 414 (1458)
++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|+
T Consensus 144 ~~-----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 144 HE-----LSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELG-LTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEE
Confidence 66 999999999999999999999999999999999999999999999876434 455666777888999999999
Q ss_pred EEcCCeEEEEc
Q 000506 415 LLSEGQIVYQG 425 (1458)
Q Consensus 415 lL~~G~iv~~G 425 (1458)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 312
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=333.64 Aligned_cols=216 Identities=25% Similarity=0.307 Sum_probs=181.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++. .....+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 4789999988741 012358999999999999999999999999999999999986 4789999999876
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQ---ATFARVSGYCEQNDI-HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
.. ...++.+||++|++. .++..||.||+.+..... ....++..++++++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREP-----ARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234678999999974 567789999998764322 2233444567899999999988777654 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLD-EA-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999986 34 46999999986 78888
Q ss_pred eCCC
Q 000506 1090 AGPL 1093 (1458)
Q Consensus 1090 ~G~~ 1093 (1458)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 313
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=329.43 Aligned_cols=201 Identities=25% Similarity=0.335 Sum_probs=168.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCCHH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMTVR 262 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 262 (1458)
+++|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++... ...++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHH
Confidence 46999999999999999999999999999999999999987 99999999987542 34689999999889989999
Q ss_pred HHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCC
Q 000506 263 ETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGV 342 (1458)
Q Consensus 263 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGL 342 (1458)
||+.+..+..+.. ..+ ....++.+++.+||++..++.+++ |
T Consensus 89 e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----L 129 (255)
T PRK11248 89 DNVAFGLQLAGVE----------KMQ------------------------RLEIAHQMLKKVGLEGAEKRYIWQ-----L 129 (255)
T ss_pred HHHHhHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCChhHhhCChhh-----C
Confidence 9998754322110 000 011235578899998888877766 9
Q ss_pred ChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc--CCe
Q 000506 343 SGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS--EGQ 420 (1458)
Q Consensus 343 SGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~--~G~ 420 (1458)
||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++++.++|+.+++.+++|+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETG-KQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 99999999999999999999999999999999999999999999865334 456667788889999999999998 599
Q ss_pred EEEEcChh
Q 000506 421 IVYQGPRE 428 (1458)
Q Consensus 421 iv~~G~~~ 428 (1458)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99988753
No 314
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=329.34 Aligned_cols=216 Identities=22% Similarity=0.278 Sum_probs=178.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC-c--eeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--TEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~--~~G~i~i~g 931 (1458)
.++++|+++.+. .+.+|+|+|+++++||+++|+|+||||||||+++|+|..++. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478899988763 245899999999999999999999999999999999986532 2 489999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1458)
++... ...++.++|++|++.+++ .||+||+.+....+. ..+..+..+.++++++.+++.+ ..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87632 234567999999998887 899999988654332 1223344456788999998843 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 457999999999999999999999999999999999999999999999865 699999999987 6888999999997
Q ss_pred c----CcEEEEeCCC
Q 000506 1083 R----GGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~----gG~~~~~G~~ 1093 (1458)
+ .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999985
No 315
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=330.32 Aligned_cols=195 Identities=22% Similarity=0.286 Sum_probs=166.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCCHH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMTVR 262 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 262 (1458)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+
T Consensus 25 ~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~ 99 (257)
T PRK11247 25 RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVI 99 (257)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHH
Confidence 35999999999999999999999999999999999999987 9999999987643 246799999999999889999
Q ss_pred HHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCC
Q 000506 263 ETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGV 342 (1458)
Q Consensus 263 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGL 342 (1458)
||+.+.... .. ...++.+++.+||++..+..+++ |
T Consensus 100 enl~~~~~~-----------~~-----------------------------~~~~~~~l~~~gl~~~~~~~~~~-----L 134 (257)
T PRK11247 100 DNVGLGLKG-----------QW-----------------------------RDAALQALAAVGLADRANEWPAA-----L 134 (257)
T ss_pred HHHHhcccc-----------hH-----------------------------HHHHHHHHHHcCChhHhcCChhh-----C
Confidence 999874210 00 00134478889998887877766 9
Q ss_pred ChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEE
Q 000506 343 SGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIV 422 (1458)
Q Consensus 343 SGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv 422 (1458)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+..+ .+++.++|+.+++.+++|+|++|++|+++
T Consensus 135 SgGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tviivsHd~~~~~~~~d~i~~l~~G~i~ 213 (257)
T PRK11247 135 SGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHG-FTVLLVTHDVSEAVAMADRVLLIEEGKIG 213 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999865434 45566778888899999999999999999
Q ss_pred EEcChh
Q 000506 423 YQGPRE 428 (1458)
Q Consensus 423 ~~G~~~ 428 (1458)
++|+.+
T Consensus 214 ~~~~~~ 219 (257)
T PRK11247 214 LDLTVD 219 (257)
T ss_pred eecccc
Confidence 988754
No 316
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=336.33 Aligned_cols=205 Identities=21% Similarity=0.301 Sum_probs=170.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-------cccceEEEecCCC--
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-------VPQRTCAYISQND-- 253 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d-- 253 (1458)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.+|||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 45999999999999999999999999999999999999998 99999999987542 1245799999986
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-ccccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICADT 332 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 332 (1458)
.+++ .||.||+.|+....+.. +. + ....++.+++.+||+ +..++
T Consensus 97 ~l~~-~tv~e~i~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gL~~~~~~~ 141 (286)
T PRK13646 97 QLFE-DTVEREIIFGPKNFKMN----------LD----------E--------------VKNYAHRLLMDLGFSRDVMSQ 141 (286)
T ss_pred ccch-hhHHHHHHhhHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCChhhhhC
Confidence 4555 59999998864322110 00 0 011235578899997 67777
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
.+.+ |||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++.+. .+++|+.++|+.+++.+++|+
T Consensus 142 ~~~~-----LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dr 215 (286)
T PRK13646 142 SPFQ-----MSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADE 215 (286)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCE
Confidence 7766 9999999999999999999999999999999999999999999999754 345666678888899999999
Q ss_pred EEEEcCCeEEEEcChhhHH
Q 000506 413 IILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~ 431 (1458)
|++|++|++++.|+++++.
T Consensus 216 i~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999988764
No 317
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.7e-33 Score=362.43 Aligned_cols=208 Identities=28% Similarity=0.380 Sum_probs=177.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++||+|+++. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||++.
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEc
Confidence 6899999999842 12469999999999999999999999999999999999987 4799999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL-------TNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 1004 (1458)
.+ ..+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+. .|+.+|..+
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G 586 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEGG 586 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCCC
Confidence 53 457889999999999876 59999998742 1 22 2346777888777643 467777543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|++++|++
T Consensus 587 -~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~- 659 (686)
T TIGR03797 587 -GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA- 659 (686)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999886 589999999985 5677999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|+++..|+.
T Consensus 660 G~iv~~G~~ 668 (686)
T TIGR03797 660 GRVVQQGTY 668 (686)
T ss_pred CEEEEECCH
Confidence 799999985
No 318
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-34 Score=321.94 Aligned_cols=191 Identities=27% Similarity=0.418 Sum_probs=164.3
Q ss_pred cceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc-------ccccceEEEEccCCCCCCCCCH
Q 000506 886 DVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ-------ATFARVSGYCEQNDIHSPHVTV 958 (1458)
Q Consensus 886 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTV 958 (1458)
|+|+++++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999876 478999999987531 1235679999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000506 959 YESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1458)
Q Consensus 959 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1038 (1458)
+||+.+..... .....+++++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYP-----AQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 22334456889999999987666654 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
|+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999876 899999999986 57788999999985 7887654
No 319
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=332.10 Aligned_cols=216 Identities=27% Similarity=0.396 Sum_probs=175.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCC-CCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDL-HFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 258 (1458)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 35999999999999999999999999999999999999998 9999999998865332 457999999973 6667
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
.||.||+.+..+..+.. .. + ....++.+++.+||++..++.+++
T Consensus 97 ~tv~enl~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP----------RE----------E--------------MVERVDQALRQVGMEDFLNREPHR-- 140 (279)
T ss_pred ccHHHHHhhhHhhCCCC----------HH----------H--------------HHHHHHHHHHHcCChhhhhCCccc--
Confidence 89999998864432110 00 0 011245688999999888888877
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++. .+|+|++|++
T Consensus 141 ---LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~-~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 141 ---LSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKG-ITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCC-CEEEEEecCHHHHH-cCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999976434 55555667777776 5999999999
Q ss_pred CeEEEEcChhhHHH---HHHhcCCCCC
Q 000506 419 GQIVYQGPREKVLE---FFEYMGFKCP 442 (1458)
Q Consensus 419 G~iv~~G~~~~~~~---~F~~~G~~~p 442 (1458)
|++++.|+.+++.. .+...|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999887653 2334454443
No 320
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=326.80 Aligned_cols=218 Identities=23% Similarity=0.326 Sum_probs=176.7
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECCe
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISGY 932 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1458)
++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67889988763 246899999999999999999999999999999999986521 26899999998
Q ss_pred eCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000506 933 PKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDG 1007 (1458)
Q Consensus 933 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1007 (1458)
+... ...++.++|++|++.+++ .||+||+.+...... ....+..++.++++++.+++.+..+... ...+.+
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSEL-NKPGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHH-hCChhh
Confidence 7642 234567999999998887 899999988653321 1122334456788899999864211111 122458
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEE
Q 000506 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQV 1087 (1458)
Q Consensus 1008 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~ 1087 (1458)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i 223 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GEL 223 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 799999999986 57788999999986 788
Q ss_pred EEeCCC
Q 000506 1088 IYAGPL 1093 (1458)
Q Consensus 1088 ~~~G~~ 1093 (1458)
+..|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14262 224 IEYGPT 229 (250)
T ss_pred EEecCH
Confidence 888875
No 321
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.3e-34 Score=322.65 Aligned_cols=195 Identities=24% Similarity=0.369 Sum_probs=164.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQNDLHF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 256 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 46999999999999999999999999999999999999987 999999999876432 235799999999999
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
+.+||+||+.+.....+.. .+ + ....++.+++.+||++..++.+++
T Consensus 91 ~~~t~~~~l~~~~~~~~~~--~~--------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 136 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP--PR--------E------------------------IRKRVPAALELVGLSHKHRALPAE 136 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC--HH--------H------------------------HHHHHHHHHHHcCCHHHhhCChhh
Confidence 9999999998865432110 00 0 011234578889998888887766
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+. + ++++.++|+.+++.+++|++++|
T Consensus 137 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~-~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 137 -----LSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKA-G-TTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred -----cCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998653 4 45666777788999999999999
Q ss_pred cCCeE
Q 000506 417 SEGQI 421 (1458)
Q Consensus 417 ~~G~i 421 (1458)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 322
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.9e-34 Score=343.75 Aligned_cols=199 Identities=27% Similarity=0.466 Sum_probs=171.0
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-------cccceEEEecCCCCCCCCCC
Q 000506 188 DVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-------VPQRTCAYISQNDLHFGEMT 260 (1458)
Q Consensus 188 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 260 (1458)
|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999999988 99999999987532 12467999999999999999
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+||+.|+.+... . .+ ....++.+++.+||++..|+.+.+
T Consensus 92 v~enl~~~~~~~~--~----------~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~---- 131 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P----------SE------------------------RRISFERVIELLGIGHLLGRLPGR---- 131 (354)
T ss_pred HHHHHHHHhhccC--h----------hH------------------------HHHHHHHHHHHcCChhHhcCChhh----
Confidence 9999998643210 0 00 011235578999999888888877
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+ ++++.++|+.+++..++|+|++|++|+
T Consensus 132 -LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 132 -LSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFG-IPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999999976434 456667788889999999999999999
Q ss_pred EEEEcChhhHH
Q 000506 421 IVYQGPREKVL 431 (1458)
Q Consensus 421 iv~~G~~~~~~ 431 (1458)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999998874
No 323
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.8e-34 Score=324.95 Aligned_cols=201 Identities=25% Similarity=0.327 Sum_probs=167.8
Q ss_pred ecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC--ceeeEEEECCeeCCcccc-cceEEEEccCCC--CCCCCC
Q 000506 883 LLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YTEGDISISGYPKNQATF-ARVSGYCEQNDI--HSPHVT 957 (1458)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 957 (1458)
+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|++...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 579999999999999999999999999999999987631 168999999988654333 357999999984 557789
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC---ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000506 958 VYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE---PLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1458)
Q Consensus 958 V~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~---~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1034 (1458)
+.|++.+...... ...++.++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKYP-----FQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543221 11233456789999999997 3445443 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1035 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1035 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
|+|||+.+...+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999764 899999999986 57788999999985 789888875
No 324
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=6.7e-34 Score=335.03 Aligned_cols=215 Identities=19% Similarity=0.241 Sum_probs=173.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-------cceEEEecCCC-
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-------QRTCAYISQND- 253 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 253 (1458)
...+|+|||++|++||+++|+|+||||||||+++|+|+++|+...+|+|.++|+++..... ++.++||+|++
T Consensus 28 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 107 (330)
T PRK09473 28 DVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPM 107 (330)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCch
Confidence 3569999999999999999999999999999999999998742238999999998865432 24799999997
Q ss_pred -CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccc
Q 000506 254 -LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADT 332 (1458)
Q Consensus 254 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 332 (1458)
.+.|.+||.+++.+........ .+.+ ....+..+++.+||++..+.
T Consensus 108 ~~l~p~~~v~~~i~~~~~~~~~~---------~~~~------------------------~~~~~~~~L~~vgL~~~~~~ 154 (330)
T PRK09473 108 TSLNPYMRVGEQLMEVLMLHKGM---------SKAE------------------------AFEESVRMLDAVKMPEARKR 154 (330)
T ss_pred hhcCCCCCHHHHHHHHHHHhcCC---------CHHH------------------------HHHHHHHHHHHcCCCChHHH
Confidence 6889999999997654322100 0000 01123457888999753322
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
. +.....|||||||||+||+||+.+|++|++||||+|||..++.++.+.|+++.+.. +++++.++|+...+.+++|+
T Consensus 155 -~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~~Dr 231 (330)
T PRK09473 155 -M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF-NTAIIMITHDLGVVAGICDK 231 (330)
T ss_pred -h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEECCHHHHHHhCCE
Confidence 1 23445599999999999999999999999999999999999999999999997753 45677788899999999999
Q ss_pred EEEEcCCeEEEEcChhhHHH
Q 000506 413 IILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~~ 432 (1458)
|++|++|++++.|+.+++.+
T Consensus 232 i~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 232 VLVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999988753
No 325
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=326.37 Aligned_cols=216 Identities=24% Similarity=0.287 Sum_probs=176.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCc---eeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---TEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~---~~G~i~i~g 931 (1458)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 477888887763 2469999999999999999999999999999999999875422 479999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1458)
.+... ..+++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.+++.+ ..++.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87642 2345679999999999999999999987643221 1122333456677777777642 33433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999986 5777899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 789988875
No 326
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=326.84 Aligned_cols=219 Identities=22% Similarity=0.258 Sum_probs=176.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 467888887763 245999999999999999999999999999999999986532 3589999999
Q ss_pred eeCCc----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000506 932 YPKNQ----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDG 1007 (1458)
Q Consensus 932 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1007 (1458)
.+... ...++.++|++|++.+++ .||.||+.+...... ....+...+.++++++.+++.+....... ..+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLK-SHAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhh-cCccc
Confidence 87531 234567999999998887 899999987643221 11223344567888888887542211111 12357
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEE
Q 000506 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQV 1087 (1458)
Q Consensus 1008 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~ 1087 (1458)
||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999975 589999999986 57888999999985 789
Q ss_pred EEeCCC
Q 000506 1088 IYAGPL 1093 (1458)
Q Consensus 1088 ~~~G~~ 1093 (1458)
+..|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 988874
No 327
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.1e-34 Score=326.88 Aligned_cols=213 Identities=21% Similarity=0.287 Sum_probs=175.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC--ceeeEEEECCe
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YTEGDISISGY 932 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~--~~~G~i~i~g~ 932 (1458)
.++++|+++.++ +.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 578899988661 35899999999999999999999999999999999987631 17899999999
Q ss_pred eCCcccc-cceEEEEccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc---cccccccCCCCC
Q 000506 933 PKNQATF-ARVSGYCEQNDI--HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP---LTNAMVGLPGVD 1006 (1458)
Q Consensus 933 ~~~~~~~-~~~~gyv~Q~~~--~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~vg~~~~~ 1006 (1458)
+...... ++.++|++|++. +.+..|+.+++.+.+.... ... ..+.++++++.++|.+ ..++. +.
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~ 139 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----PF 139 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----Cc
Confidence 8653333 357999999974 4466899998876433221 111 2356889999999976 33444 34
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 140 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~-G 217 (254)
T PRK10418 140 EMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH-G 217 (254)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999986 57788999999985 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (254)
T PRK10418 218 RIVEQGDV 225 (254)
T ss_pred EEEEecCH
Confidence 89998875
No 328
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=362.28 Aligned_cols=219 Identities=26% Similarity=0.341 Sum_probs=184.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 478899988763 2469999999999999999999999999999999999876 4789999999876
Q ss_pred Cccc----ccceEEEEccCCCCCCCCCHHHHHHHHHhhh----cCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000506 935 NQAT----FARVSGYCEQNDIHSPHVTVYESLLFSAWLR----LSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 935 ~~~~----~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
.... .++.+||++|++.+++.+||+|++.++.... .....+.++.+++++++++.+||.+..++.++
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~----- 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVA----- 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchh-----
Confidence 4321 2356999999999999999999998753211 00001233445678999999999887777654
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
+|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. .+.+.||++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999888999999999986 57788999999985 78
Q ss_pred EEEeCCCCc
Q 000506 1087 VIYAGPLGR 1095 (1458)
Q Consensus 1087 ~~~~G~~~~ 1095 (1458)
+++.|+..+
T Consensus 223 i~~~g~~~~ 231 (510)
T PRK09700 223 SVCSGMVSD 231 (510)
T ss_pred Eeeecchhh
Confidence 999988653
No 329
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.2e-34 Score=325.79 Aligned_cols=211 Identities=24% Similarity=0.382 Sum_probs=172.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc----cceEEEecCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLHFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 258 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 46999999999999999999999999999999999999988 9999999998754322 2469999999999999
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||+||+.+...... ..+.......+ . +....++.+++.+||++..++.+++
T Consensus 92 ~tv~~nl~~~~~~~~--~~~~~~~~~~~----------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (242)
T TIGR03411 92 LTVFENLELALPRDK--SVFASLFFRLS----------A--------------EEKDRIEEVLETIGLADEADRLAGL-- 143 (242)
T ss_pred CCHHHHHHHhhhccc--ccccccccccH----------H--------------HHHHHHHHHHHHcCCchhhcCChhh--
Confidence 999999988543110 00000000000 0 0112345688999999888888777
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ + .+++.++|+.+++.+++|+|++|++
T Consensus 144 ---LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 144 ---LSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999864 4 4566677888899999999999999
Q ss_pred CeEEEEcChhhH
Q 000506 419 GQIVYQGPREKV 430 (1458)
Q Consensus 419 G~iv~~G~~~~~ 430 (1458)
|+++++|+.+++
T Consensus 218 g~~~~~~~~~~~ 229 (242)
T TIGR03411 218 GSVLAEGSLDQV 229 (242)
T ss_pred CeEEeeCCHHHH
Confidence 999999998775
No 330
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-34 Score=336.69 Aligned_cols=220 Identities=21% Similarity=0.279 Sum_probs=179.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC---CceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1458)
.++++|+++.+.. +.+.+|+|+|++|++||++||+|||||||||||++|+|.... .+.+|+|.++|
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 5889999988741 124599999999999999999999999999999999998642 24689999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCC-HHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDID-SKTRKMFVDEVMDLVELEPLTNAMVGLPGV 1005 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~-~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1458)
+++.. ..+++.++||||++.+++ .|++||+.|+.... ... .+..++.++++++.++|.+..++.++. ..
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~ 223 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDK-AG 223 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhC-Cc
Confidence 98742 235678999999998875 79999999864321 122 222344578889999886543344443 34
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
..||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 58999999999999999999999999999999999999999999999875 699999999986 46777999999985 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
+++..|+.
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 99999986
No 331
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-34 Score=315.82 Aligned_cols=180 Identities=49% Similarity=0.790 Sum_probs=156.2
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCcccEEEECCeecCCc--cccceEEEecCCCCC
Q 000506 181 RKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD---DDLKLTGKIKYCGHEFKEF--VPQRTCAYISQNDLH 255 (1458)
Q Consensus 181 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~---~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~ 255 (1458)
.++.+|+|+|+++++||+++|+|||||||||||++|+|.++ |+ +|+|.++|+++... ..++.++|++|++.+
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~ 94 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVH 94 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEeccccc
Confidence 44579999999999999999999999999999999999998 55 99999999987653 234679999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
++.+||+||+.++.+.. .++.+.
T Consensus 95 ~~~~tv~~~l~~~~~~~---------------------------------------------------------~~~~~~ 117 (202)
T cd03233 95 FPTLTVRETLDFALRCK---------------------------------------------------------GNEFVR 117 (202)
T ss_pred CCCCcHHHHHhhhhhhc---------------------------------------------------------cccchh
Confidence 99999999998743210 122333
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.++++++||+.+++.+++|++++
T Consensus 118 -----~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~ 192 (202)
T cd03233 118 -----GISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLV 192 (202)
T ss_pred -----hCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEE
Confidence 399999999999999999999999999999999999999999999997644567788888888899999999999
Q ss_pred EcCCeEEEEc
Q 000506 416 LSEGQIVYQG 425 (1458)
Q Consensus 416 L~~G~iv~~G 425 (1458)
|++|++++.|
T Consensus 193 l~~G~i~~~g 202 (202)
T cd03233 193 LYEGRQIYYG 202 (202)
T ss_pred EECCEEEecC
Confidence 9999998765
No 332
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.7e-34 Score=328.15 Aligned_cols=215 Identities=25% Similarity=0.305 Sum_probs=176.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCee-
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYP- 933 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~- 933 (1458)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 478899988763 2459999999999999999999999999999999999876 478999999987
Q ss_pred ----CCcc---c----ccceEEEEccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccc
Q 000506 934 ----KNQA---T----FARVSGYCEQNDI--HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-LTNAM 999 (1458)
Q Consensus 934 ----~~~~---~----~~~~~gyv~Q~~~--~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 999 (1458)
.... . .++.++|++|++. +.+.+|+.|++.+...... .....+..+.++++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346999999974 5678899999976432111 1122334556889999999974 45554
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceE
Q 000506 1000 VGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1458)
Q Consensus 1000 vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~v 1078 (1458)
+ ..||||||||++|||||+.+|++|+|||||+|||+.+...+++.|++++++ |.|||+++|++. .+.+.+|++
T Consensus 149 ~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 P-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred C-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3 479999999999999999999999999999999999999999999998765 899999999986 466789999
Q ss_pred EEEecCcEEEEeCCC
Q 000506 1079 LLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1079 lll~~gG~~~~~G~~ 1093 (1458)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 799998875
No 333
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=329.97 Aligned_cols=205 Identities=24% Similarity=0.318 Sum_probs=169.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc----------------cccceE
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF----------------VPQRTC 246 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~----------------~~~~~~ 246 (1458)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 46999999999999999999999999999999999999987 99999999887421 124579
Q ss_pred EEecCCCCCCCCCCHHHHHHHhhh-hccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcC
Q 000506 247 AYISQNDLHFGEMTVRETMDFSGR-CLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLG 325 (1458)
Q Consensus 247 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lg 325 (1458)
+|++|++.+++.+||+||+.++.. ..+.. +. + ....+..+++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------KQ----------E--------------ARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC----------HH----------H--------------HHHHHHHHHHHcC
Confidence 999999999999999999987432 11100 00 0 0112345788999
Q ss_pred Ccccc-cccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChh
Q 000506 326 LDICA-DTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAP 404 (1458)
Q Consensus 326 L~~~~-dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~ 404 (1458)
|.+.. +..+.. ||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+ .+|+.++|+.+
T Consensus 141 l~~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~g-~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGKYPVH-----LSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-EG-KTMVVVTHEMG 213 (257)
T ss_pred CChhhhhCCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHH
Confidence 98753 655555 999999999999999999999999999999999999999999999875 24 55666778888
Q ss_pred HHHhccCEEEEEcCCeEEEEcChhhHH
Q 000506 405 EAYDLFDNIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 405 ~~~~~~D~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++.+++|+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 999999999999999999999988764
No 334
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=330.91 Aligned_cols=218 Identities=26% Similarity=0.427 Sum_probs=176.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 588999988773 12469999999999999999999999999999999999876 4789999999876
Q ss_pred CcccccceEEEEccCCCCC--CCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 935 NQATFARVSGYCEQNDIHS--PHVTVYESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~--~~lTV~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
.....++.++|++|++.+. ...+++|++.++...... ........++.++++++.++|.+..++.++ .||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIG-----ELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcc-----cCCHH
Confidence 4322234699999997653 234789988654211000 011122334567889999999887777654 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
||||++||+||+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 577889999766 4 7899988
Q ss_pred CCC
Q 000506 1092 PLG 1094 (1458)
Q Consensus 1092 ~~~ 1094 (1458)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 864
No 335
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.8e-34 Score=322.08 Aligned_cols=198 Identities=26% Similarity=0.372 Sum_probs=169.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCCH
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMTV 261 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 261 (1458)
+.++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~ 87 (223)
T TIGR03740 12 KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTA 87 (223)
T ss_pred CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCH
Confidence 346999999999999999999999999999999999999987 999999998875422 3579999999988988999
Q ss_pred HHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCC
Q 000506 262 RETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRG 341 (1458)
Q Consensus 262 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 341 (1458)
+||+.+.....+.. ...+..+++.+||++..|..+++
T Consensus 88 ~~~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~~~~----- 124 (223)
T TIGR03740 88 RENLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKKAKQ----- 124 (223)
T ss_pred HHHHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhhHhh-----
Confidence 99998754322100 00134478889999888887776
Q ss_pred CChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeE
Q 000506 342 VSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQI 421 (1458)
Q Consensus 342 LSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~i 421 (1458)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+ .+++.++|+.+++.+++|++++|++|++
T Consensus 125 LS~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~g~i 202 (223)
T TIGR03740 125 FSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QG-ITVILSSHILSEVQQLADHIGIISEGVL 202 (223)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999999865 34 4556667778889999999999999999
Q ss_pred EEEcChh
Q 000506 422 VYQGPRE 428 (1458)
Q Consensus 422 v~~G~~~ 428 (1458)
++.|++.
T Consensus 203 ~~~~~~~ 209 (223)
T TIGR03740 203 GYQGKIN 209 (223)
T ss_pred EEecChh
Confidence 9999864
No 336
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=334.01 Aligned_cols=205 Identities=20% Similarity=0.307 Sum_probs=170.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-------cccceEEEecCCCC-
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-------VPQRTCAYISQNDL- 254 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~- 254 (1458)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999998 99999999987532 12356999999962
Q ss_pred CCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-cccccc
Q 000506 255 HFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICADTM 333 (1458)
Q Consensus 255 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 333 (1458)
.+..+||+||+.|+.+..+.. +.+ ....++.+++.+||+ +..++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------EDE------------------------AKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCCChhHhhCC
Confidence 333579999998864322110 000 011245578899997 577888
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEE
Q 000506 334 VGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNI 413 (1458)
Q Consensus 334 vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v 413 (1458)
+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ . +++|+.++|+.+++.+++|+|
T Consensus 143 ~~~-----LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 PFE-----LSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-A-GHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEE
Confidence 777 999999999999999999999999999999999999999999999864 2 456667888899999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000506 414 ILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 414 ~lL~~G~iv~~G~~~~~~ 431 (1458)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 337
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=336.21 Aligned_cols=208 Identities=20% Similarity=0.236 Sum_probs=175.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCC--C
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQND--L 254 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~ 254 (1458)
+++|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 56999999999999999999999999999999999999887 999999999886542 245799999997 5
Q ss_pred CCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-cccccc
Q 000506 255 HFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICADTM 333 (1458)
Q Consensus 255 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 333 (1458)
+.|.+||.+++.+..+.... ..+.+ ....+..+++.+||+ ...++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~---------~~~~~------------------------~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTS---------LSAAE------------------------RREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccC---------CCHHH------------------------HHHHHHHHHHHCCCChHHhcCC
Confidence 88999999999775443210 00000 011345688999996 366777
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEE
Q 000506 334 VGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNI 413 (1458)
Q Consensus 334 vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v 413 (1458)
+.+ |||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 152 p~~-----LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 152 PHM-----FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQEL-GLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred Ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEE
Confidence 666 99999999999999999999999999999999999999999999997653 456777889999999999999
Q ss_pred EEEcCCeEEEEcChhhHHH
Q 000506 414 ILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 414 ~lL~~G~iv~~G~~~~~~~ 432 (1458)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999988753
No 338
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.8e-35 Score=342.61 Aligned_cols=209 Identities=24% Similarity=0.408 Sum_probs=176.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++|+||++++. +++++|+++||+|++||.+||+|+|||||||++++|.+... .+|+|+|||+++
T Consensus 351 ~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~di 415 (591)
T KOG0057|consen 351 SIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQDI 415 (591)
T ss_pred cEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCeeH
Confidence 599999999885 23569999999999999999999999999999999999775 689999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-------ccccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-------PLTNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~vg~~~ 1004 (1458)
.. ..+|+.+||||||-.++. -||.+|+.|+. .+.+.+ +|-++.+..++. +-.+|.+|..|
T Consensus 416 k~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VGerG 485 (591)
T KOG0057|consen 416 KEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVGERG 485 (591)
T ss_pred hhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHhhcc
Confidence 43 567899999999888774 69999999963 233333 344555555554 34566788655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
. -|||||||||+||||++.+|+|+++|||||.||+.+...+++.+.+. ..|+|+|++.|+. +..+.||+|++|++
T Consensus 486 ~-~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l~n- 560 (591)
T KOG0057|consen 486 L-MLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVLDN- 560 (591)
T ss_pred c-ccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEEEC-
Confidence 3 69999999999999999999999999999999999999999999984 4689999999986 57889999999996
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|++...|+.
T Consensus 561 G~v~e~gth 569 (591)
T KOG0057|consen 561 GTVKEYGTH 569 (591)
T ss_pred CeeEEeccH
Confidence 688888875
No 339
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=3.4e-34 Score=320.66 Aligned_cols=211 Identities=25% Similarity=0.384 Sum_probs=176.7
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.+.. ..+.+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~---------~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGH---------GSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccC---------CCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 567888877631 0112569999999999999999999999999999999999876 47899999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 936 QA------TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
.. ..++.++|++|++.+++..|+.||+.+...... ....++..+.++++++.++|.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 245789999999999999999999998654321 1234445567899999999987777664 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEecCcEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQV 1087 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~ 1087 (1458)
+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+.+|++++|.+ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 4899999999975 4578999999985 554
No 340
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3.3e-34 Score=327.44 Aligned_cols=206 Identities=25% Similarity=0.359 Sum_probs=172.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc----------------cccceE
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF----------------VPQRTC 246 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~----------------~~~~~~ 246 (1458)
.++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 46999999999999999999999999999999999999987 99999999987532 124579
Q ss_pred EEecCCCCCCCCCCHHHHHHHhhhh-ccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcC
Q 000506 247 AYISQNDLHFGEMTVRETMDFSGRC-LGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLG 325 (1458)
Q Consensus 247 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lg 325 (1458)
+|++|++.+++.+||.||+.++... .+.. . .+ ....++.+++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------R----------AE--------------AEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC----------H----------HH--------------HHHHHHHHHHHcC
Confidence 9999999999999999999875321 0100 0 00 0012345788999
Q ss_pred CcccccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhH
Q 000506 326 LDICADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPE 405 (1458)
Q Consensus 326 L~~~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~ 405 (1458)
|++..+..+.+ ||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+.. +++++.++|+.++
T Consensus 136 l~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADHMPAQ-----LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEH-DLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhcChhh-----cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHH
Confidence 98887777665 99999999999999999999999999999999999999999999987643 4566667788889
Q ss_pred HHhccCEEEEEcCCeEEEEcChhhHH
Q 000506 406 AYDLFDNIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 406 ~~~~~D~v~lL~~G~iv~~G~~~~~~ 431 (1458)
+.+++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999987763
No 341
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=332.77 Aligned_cols=207 Identities=28% Similarity=0.365 Sum_probs=172.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCC--c---cccceEEEecCCCC-CC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKE--F---VPQRTCAYISQNDL-HF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 256 (1458)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 45999999999999999999999999999999999999987 9999999998742 1 12457999999963 33
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
...||+||+.+.....+.. ..+ ....++.+++.+||.+..|+.+++
T Consensus 96 ~~~tv~e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~ 141 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLP----------EDE------------------------VRKRVDNALKRTGIEHLKDKPTHC 141 (283)
T ss_pred ccccHHHHHHhHHHHcCCC----------HHH------------------------HHHHHHHHHHHCCChhhhhCCccc
Confidence 4579999998854322110 000 011245688999999888888777
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+ ++|+.++|+.+++.+++|++++|
T Consensus 142 -----LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tillvsH~~~~~~~~~dri~~l 215 (283)
T PRK13636 142 -----LSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELG-LTIIIATHDIDIVPLYCDNVFVM 215 (283)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCC-CEEEEEecCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999976434 45666778888999999999999
Q ss_pred cCCeEEEEcChhhHHH
Q 000506 417 SEGQIVYQGPREKVLE 432 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~~~ 432 (1458)
++|++++.|+.+++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999988753
No 342
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-34 Score=328.83 Aligned_cols=219 Identities=24% Similarity=0.290 Sum_probs=177.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC---CceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1458)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 588999998773 23589999999999999999999999999999999998652 13689999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
.+... ..+++.++|++|++.+++. ||+||+.+...... ....+..++.++++++.+++.+......+ ..+.
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 167 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLH-ENAF 167 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhh-CCcc
Confidence 87642 2346789999999988876 99999987654321 11222334568889999998642111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|+++ ++.+.+|++++|++ |+
T Consensus 168 ~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 244 (272)
T PRK14236 168 GLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-GK 244 (272)
T ss_pred cCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 799999999986 57788999999985 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
++..|+.
T Consensus 245 i~~~g~~ 251 (272)
T PRK14236 245 LVEYGDT 251 (272)
T ss_pred EEecCCH
Confidence 9988875
No 343
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.2e-32 Score=313.05 Aligned_cols=195 Identities=24% Similarity=0.301 Sum_probs=147.9
Q ss_pred ccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcccccceEEEEccCCCCCCCCCHHHHHHH
Q 000506 885 RDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQATFARVSGYCEQNDIHSPHVTVYESLLF 964 (1458)
Q Consensus 885 ~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f 964 (1458)
.==.++|..||+++++||||-||||+.++|+|..++ ++|+ .. .-.++|=||--.--...||++-|.-
T Consensus 358 ~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~~ 424 (591)
T COG1245 358 EVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLRS 424 (591)
T ss_pred EecCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----Cc-------cceEeecceeecCCCCCcHHHHHHH
Confidence 333577888999999999999999999999998773 6665 11 1347888887655578899997754
Q ss_pred HHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000506 965 SAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1044 (1458)
Q Consensus 965 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1044 (1458)
...-+... .-+..|+++-|.|.++.+..+. +|||||.|||+||.+|.++++|.+||||++.||++.+.
T Consensus 425 ~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v~-----~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~ 492 (591)
T COG1245 425 AIRSAFGS-------SYFKTEIVKPLNLEDLLERPVD-----ELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRI 492 (591)
T ss_pred hhhhhccc-------chhHHhhcCccchHHHHhcccc-----cCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHH
Confidence 33221111 1234678899999999888764 79999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCC---CCcchHHHHHHHHhC
Q 000506 1045 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGP---LGRQSQKLVEYFEAV 1107 (1458)
Q Consensus 1045 ~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~---~~~~~~~~~~~f~~~ 1107 (1458)
.+-+.||+.... ++|.+++-||.-+ +--..||+++.. |+---+|- +....+.+..|.+.+
T Consensus 493 ~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~--GePg~~g~a~~P~~mr~GMN~FLk~l 556 (591)
T COG1245 493 IVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE--GEPGKHGHASPPMSMREGMNRFLKNL 556 (591)
T ss_pred HHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe--cCCCccCcCCCCccHHHHHHHHHHHc
Confidence 999999998754 7899999999753 444679988885 33222221 112335566777776
No 344
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.6e-34 Score=322.11 Aligned_cols=196 Identities=25% Similarity=0.316 Sum_probs=165.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQNDLHF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 256 (1458)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 46999999999999999999999999999999999999987 999999999876432 245799999999888
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
+.+||+||+.+.....+... . + ....++.+++.+||.+..++.+++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 137 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG----------D----------D--------------IRRRVSAALDKVGLLDKAKNFPIQ 137 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH----------H----------H--------------HHHHHHHHHHHcCChhhhhCCchh
Confidence 89999999988643321100 0 0 001234578889998877777766
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +++++.++|+.+++.+++|+|++|
T Consensus 138 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 138 -----LSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRV--GVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998653 356667788888999999999999
Q ss_pred cCCeEE
Q 000506 417 SEGQIV 422 (1458)
Q Consensus 417 ~~G~iv 422 (1458)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999975
No 345
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-35 Score=319.37 Aligned_cols=201 Identities=25% Similarity=0.341 Sum_probs=183.1
Q ss_pred eecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc---c---cc-cceEEEEccCCCCCC
Q 000506 882 QLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ---A---TF-ARVSGYCEQNDIHSP 954 (1458)
Q Consensus 882 ~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~---~~-~~~~gyv~Q~~~~~~ 954 (1458)
.-++|+|++|+.||++.|||-||||||||+++|.++.. ++.|+|+++|.++.. . .+ ++.++.|+|...++|
T Consensus 42 vGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlP 119 (386)
T COG4175 42 VGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLP 119 (386)
T ss_pred EeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcccc
Confidence 45899999999999999999999999999999999887 589999999987532 1 23 357999999999999
Q ss_pred CCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000506 955 HVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1458)
Q Consensus 955 ~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1034 (1458)
+.||.||..|+..++ .++++++++++.+.|+.+||....+.++ ++||||+||||.+||||+.+|+||++|||
T Consensus 120 hrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDEa 191 (386)
T COG4175 120 HRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDEA 191 (386)
T ss_pred chhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecCc
Confidence 999999999998776 5678999999999999999999999885 48999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1035 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1035 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
+|.|||--+.++++-|.++.++ ++|||++|||.+ |.+..-|||.+|+ +|+++..|++.
T Consensus 192 FSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~ 250 (386)
T COG4175 192 FSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPE 250 (386)
T ss_pred hhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHH
Confidence 9999999999999999998755 899999999987 7889999999997 68999999874
No 346
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=328.37 Aligned_cols=206 Identities=29% Similarity=0.452 Sum_probs=171.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 259 (1458)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 46999999999999999999999999999999999999987 999999999875432 235699999998887889
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||+||+.+.....+.. .+ + ....++.+++.+||++..++.+++
T Consensus 92 tv~e~l~~~~~~~~~~--~~--------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~--- 134 (258)
T PRK13548 92 TVEEVVAMGRAPHGLS--RA--------E------------------------DDALVAAALAQVDLAHLAGRDYPQ--- 134 (258)
T ss_pred CHHHHHHhhhcccCCC--cH--------H------------------------HHHHHHHHHHHcCCHhHhcCCccc---
Confidence 9999998753211100 00 0 011234578899998888888877
Q ss_pred CCCChHHHHHHHHHHHHh------cCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEE
Q 000506 340 RGVSGGQKKRVTTGEMLV------GPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNI 413 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~------~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v 413 (1458)
|||||||||+||+||+ .+|++++|||||+|||+.++..+.+.|+++++..+ .+|+.++|+.+++.+++|+|
T Consensus 135 --LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 135 --LSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERG-LAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred --CCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhcCEE
Confidence 9999999999999999 59999999999999999999999999999874334 45666778888999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000506 414 ILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 414 ~lL~~G~iv~~G~~~~~~ 431 (1458)
++|++|++++.|+++++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999987764
No 347
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=328.84 Aligned_cols=215 Identities=20% Similarity=0.284 Sum_probs=175.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcC--C-CceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1458)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478999998763 2469999999999999999999999999999999999642 1 14689999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1458)
++... ...++.++|++|++.+++. ||+||+.+..... ........++.++++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYA--GERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87642 1345679999999988875 9999998764322 11122233456788888888852 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 689999999986 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 789998875
No 348
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-34 Score=334.62 Aligned_cols=211 Identities=20% Similarity=0.259 Sum_probs=171.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcccEEEECCeecCCccc-------cceEEEecCCC-
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDL-KLTGKIKYCGHEFKEFVP-------QRTCAYISQND- 253 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 253 (1458)
.++|+||||+|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999987421 138999999998865432 23699999997
Q ss_pred -CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc---c
Q 000506 254 -LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI---C 329 (1458)
Q Consensus 254 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~---~ 329 (1458)
.+.|.+||.+++....+..... .+.+ ....++.+++.+||++ .
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~---------~~~~------------------------~~~~~~~~L~~~gL~~~~~~ 146 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGG---------NKKT------------------------RRQRAIDLLNQVGIPDPASR 146 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCC---------CHHH------------------------HHHHHHHHHHHCCCCChHHH
Confidence 4788999999987654321000 0000 1123455789999974 3
Q ss_pred ccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhc
Q 000506 330 ADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDL 409 (1458)
Q Consensus 330 ~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~ 409 (1458)
.+..+++ |||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+..+ .+++.++|+...+.++
T Consensus 147 l~~~p~~-----LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g-~til~iTHdl~~~~~~ 220 (326)
T PRK11022 147 LDVYPHQ-----LSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKEN-MALVLITHDLALVAEA 220 (326)
T ss_pred HhCCchh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHh
Confidence 4555554 999999999999999999999999999999999999999999999976544 5677788889999999
Q ss_pred cCEEEEEcCCeEEEEcChhhHHH
Q 000506 410 FDNIILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 410 ~D~v~lL~~G~iv~~G~~~~~~~ 432 (1458)
+|+|++|++|++++.|+.+++.+
T Consensus 221 adri~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 221 AHKIIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred CCEEEEEECCEEEEECCHHHHhh
Confidence 99999999999999999988753
No 349
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=326.88 Aligned_cols=221 Identities=21% Similarity=0.255 Sum_probs=179.2
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.++++|+++.+. +..+|+|+|+++++||+++|+|+||||||||+++|+|..++. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478999998773 235899999999999999999999999999999999987632 1479999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
++... ...++.++|++|+..+++ .|++||+.+...... ..+..+..+.+.++++.+++.+..+...+ ..+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIH-KSAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhc-CCcc
Confidence 87531 234567999999988887 899999987643221 11233334568899999998542211111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEEEEecC-
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRG- 1084 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hq~s~~i~~~~D~vlll~~g- 1084 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ +|+|||+++|++. ++.+.||++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999986 688899999999853
Q ss_pred ---cEEEEeCCC
Q 000506 1085 ---GQVIYAGPL 1093 (1458)
Q Consensus 1085 ---G~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 799999886
No 350
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=326.66 Aligned_cols=219 Identities=24% Similarity=0.301 Sum_probs=179.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 578999998874 246999999999999999999999999999999999987531 4689999999
Q ss_pred eeCCc----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000506 932 YPKNQ----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDG 1007 (1458)
Q Consensus 932 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1007 (1458)
.+... ...++.++|++|++.+++ .||+||+.+..... ...+.++..+.+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--KLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 234677999999998887 89999998764322 112334444567888999998753221111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEE
Q 000506 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQV 1087 (1458)
Q Consensus 1008 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~ 1087 (1458)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999986 57788999999985 799
Q ss_pred EEeCCC
Q 000506 1088 IYAGPL 1093 (1458)
Q Consensus 1088 ~~~G~~ 1093 (1458)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999885
No 351
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=331.26 Aligned_cols=204 Identities=26% Similarity=0.381 Sum_probs=169.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc----ccceEEEecCCCC-CCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV----PQRTCAYISQNDL-HFG 257 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 257 (1458)
.++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 45999999999999999999999999999999999999987 999999999875432 2457999999975 466
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCc
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQ 337 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 337 (1458)
..||.||+.|..+..+.. +.+ ....++.+++.+||++..++.+++
T Consensus 92 ~~tv~enl~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~- 136 (274)
T PRK13644 92 GRTVEEDLAFGPENLCLP----------PIE------------------------IRKRVDRALAEIGLEKYRHRSPKT- 136 (274)
T ss_pred cchHHHHHHhhHHHcCCC----------HHH------------------------HHHHHHHHHHHCCCHHHhcCCccc-
Confidence 789999998864322110 000 011235578899999888888876
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++|+.++|+.+++ ..+|+|++|+
T Consensus 137 ----LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g-~til~~tH~~~~~-~~~d~v~~l~ 209 (274)
T PRK13644 137 ----LSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-KG-KTIVYITHNLEEL-HDADRIIVMD 209 (274)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CC-CEEEEEecCHHHH-hhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875 34 4556667777777 5699999999
Q ss_pred CCeEEEEcChhhHH
Q 000506 418 EGQIVYQGPREKVL 431 (1458)
Q Consensus 418 ~G~iv~~G~~~~~~ 431 (1458)
+|++++.|+.+++.
T Consensus 210 ~G~i~~~g~~~~~~ 223 (274)
T PRK13644 210 RGKIVLEGEPENVL 223 (274)
T ss_pred CCEEEEECCHHHHh
Confidence 99999999988764
No 352
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.6e-34 Score=318.87 Aligned_cols=201 Identities=24% Similarity=0.317 Sum_probs=173.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++|+++.++ ++.+|+++|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|++.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 478899987663 2459999999999999999999999999999999999876 4789999999876
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 935 NQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
.....++.++|++|++.+++.+|++|++.+....+. .. ..+.++++++.++|.+..++.+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543345679999999988888999999988654321 11 2345678999999988777665 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
|++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999999888999999999986 6888999999986
No 353
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.6e-34 Score=319.60 Aligned_cols=194 Identities=29% Similarity=0.434 Sum_probs=161.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCC-CCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDL-HFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 258 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 56999999999999999999999999999999999999987 999999999876432 2457999999974 4667
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||+||+.+.....+... . + .....+.+++.+||++..++.+++
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 134 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------E----------E--------------IEERVEEALELVGLEGLRDRSPFT-- 134 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------H----------H--------------HHHHHHHHHHHcCcHhhhcCCccc--
Confidence 899999987543211100 0 0 011234578889998877877766
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. + ++++.++|+.+++.+++|+|++|++
T Consensus 135 ---LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~-~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 135 ---LSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE-G-KTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999999999999999998763 4 5566677888899999999999999
Q ss_pred Ce
Q 000506 419 GQ 420 (1458)
Q Consensus 419 G~ 420 (1458)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 354
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-34 Score=327.80 Aligned_cols=205 Identities=28% Similarity=0.372 Sum_probs=168.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCC-CCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDL-HFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 258 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 45899999999999999999999999999999999999987 999999999886432 2467999999974 5677
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||+||+.+.....+... . + ....++.+++.+||++..++.++.
T Consensus 99 ~tv~enl~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 142 (271)
T PRK13632 99 ATVEDDIAFGLENKKVPP----------K----------K--------------MKDIIDDLAKKVGMEDYLDKEPQN-- 142 (271)
T ss_pred ccHHHHHHhHHHHcCCCH----------H----------H--------------HHHHHHHHHHHcCCHHHhhCCccc--
Confidence 899999987643211100 0 0 011245578899999888888776
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+. +++.++|+.+++. .+|++++|++
T Consensus 143 ---LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~-tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 143 ---LSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKK-TLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCc-EEEEEEechhHHh-hCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998764234 4445556666664 7999999999
Q ss_pred CeEEEEcChhhHH
Q 000506 419 GQIVYQGPREKVL 431 (1458)
Q Consensus 419 G~iv~~G~~~~~~ 431 (1458)
|+++..|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999987764
No 355
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=4.3e-34 Score=320.29 Aligned_cols=194 Identities=27% Similarity=0.403 Sum_probs=162.1
Q ss_pred ccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcccccceEEEEccCCCCCCCC
Q 000506 877 EEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQATFARVSGYCEQNDIHSPHV 956 (1458)
Q Consensus 877 ~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~l 956 (1458)
.++.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|++... ..+...+.+.+
T Consensus 31 ~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~ 99 (224)
T cd03220 31 EVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPEL 99 (224)
T ss_pred hcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCC
Confidence 3445679999999999999999999999999999999999876 478999999986421 11123345779
Q ss_pred CHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000506 957 TVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1458)
Q Consensus 957 TV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTs 1036 (1458)
||+||+.+....+ ....++.++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+
T Consensus 100 tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~ 171 (224)
T cd03220 100 TGRENIYLNGRLL---GLSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLA 171 (224)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 9999998865432 1233444556888999999988777765 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1037 gLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 172 gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 172 VGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred cCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999877899999999986 57778999999985 7887654
No 356
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-34 Score=327.49 Aligned_cols=221 Identities=20% Similarity=0.290 Sum_probs=174.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc----cceEEEecCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLHFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 258 (1458)
+++|+|+|+++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 46999999999999999999999999999999999999987 9999999998765321 2358999999999999
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||+||+.++....... +......... ...+.. .+....++..++.+||++..++.+++
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~~~~---~~~~~~-------------~~~~~~~~~~l~~~gl~~~~~~~~~~-- 153 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLLKTP---AFRRAE-------------SEALDRAATWLERVGLLEHANRQAGN-- 153 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhcccc---ccccch-------------hHHHHHHHHHHHhCChhhhhhCChhh--
Confidence 99999999854311000 0000000000 000000 00112245578899998888888777
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|++++|++
T Consensus 154 ---LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 154 ---LAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHN-VTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcC-CEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999876434 5666677888899999999999999
Q ss_pred CeEEEEcChhhHH
Q 000506 419 GQIVYQGPREKVL 431 (1458)
Q Consensus 419 G~iv~~G~~~~~~ 431 (1458)
|++++.|+++++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999987763
No 357
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-34 Score=328.47 Aligned_cols=213 Identities=23% Similarity=0.310 Sum_probs=175.1
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC---CceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1458)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 588999988763 24599999999999999999999999999999999998652 13689999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1458)
.+... ...++.++|++|++.+++. ||+||+.+....+. ... ...+.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2346789999999988775 99999988654331 122 23456889999999853 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEE-EE
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELL-LM 1081 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vl-ll 1081 (1458)
+..||||||||++||++|+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 357999999999999999999999999999999999999999999999976 489999999986 5777899976 45
Q ss_pred ecCcEEEEeCCC
Q 000506 1082 KRGGQVIYAGPL 1093 (1458)
Q Consensus 1082 ~~gG~~~~~G~~ 1093 (1458)
+ +|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 6 5789888874
No 358
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.4e-34 Score=320.39 Aligned_cols=200 Identities=29% Similarity=0.425 Sum_probs=161.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCC--CCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHF--GEMT 260 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 260 (1458)
.++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. ..+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999999988 9999999987642 346799999997653 3479
Q ss_pred HHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCC
Q 000506 261 VRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRR 340 (1458)
Q Consensus 261 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 340 (1458)
|+||+.+....... .... ...+ .....+.+++.+||++..++.+++
T Consensus 87 v~e~l~~~~~~~~~--~~~~--------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~---- 132 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRR--------------LSKA--------------DKAKVDEALERVGLSELADRQIGE---- 132 (213)
T ss_pred HHHHHHhccccccc--cccC--------------CCHH--------------HHHHHHHHHHHcCCHHHHhCCccc----
Confidence 99999875321100 0000 0000 011245578899998878888776
Q ss_pred CCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCe
Q 000506 341 GVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQ 420 (1458)
Q Consensus 341 GLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~ 420 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+ ++++.++|+.+++.+++|++++|++|
T Consensus 133 -LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 133 -LSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-EG-MTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 999999999999999999999999999999999999999999999875 34 55666778888999999999999876
Q ss_pred EEEEc
Q 000506 421 IVYQG 425 (1458)
Q Consensus 421 iv~~G 425 (1458)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 65554
No 359
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-34 Score=325.65 Aligned_cols=209 Identities=24% Similarity=0.336 Sum_probs=168.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCeecCCcc---ccceEEEecCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD--LKLTGKIKYCGHEFKEFV---PQRTCAYISQNDLHFG 257 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 257 (1458)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 45999999999999999999999999999999999998741 123899999999875432 2457999999998888
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccccc
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CADTM 333 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt~ 333 (1458)
.+||+||+.++.+....... +. + ....+..+++.+||.+ ..|+.
T Consensus 96 ~~tv~enl~~~~~~~~~~~~--------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~~ 143 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVKS--------KK----------E--------------LQERVRWALEKAQLWDEVKDRLDAP 143 (250)
T ss_pred CCcHHHHHHHHHHhccccCC--------HH----------H--------------HHHHHHHHHHHcCCCcchhhhhcCC
Confidence 99999999886432211000 00 0 0112345788888853 34555
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEE
Q 000506 334 VGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNI 413 (1458)
Q Consensus 334 vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v 413 (1458)
+.+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++++.++|+.+++.+++|++
T Consensus 144 ~~~-----LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i 215 (250)
T PRK14247 144 AGK-----LSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK--D-MTIVLVTHFPQQAARISDYV 215 (250)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCEE
Confidence 555 999999999999999999999999999999999999999999999853 4 45666778888899999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000506 414 ILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 414 ~lL~~G~iv~~G~~~~~~ 431 (1458)
++|++|+++..|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 216 AFLYKGQIVEWGPTREVF 233 (250)
T ss_pred EEEECCeEEEECCHHHHH
Confidence 999999999999988764
No 360
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.1e-34 Score=320.34 Aligned_cols=196 Identities=21% Similarity=0.339 Sum_probs=161.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-------cceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-------QRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999987 9999999998765322 2469999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
++.+||+||+.+........ +.+ ....+..+++.+||++..++.++
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~ 140 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------VKE------------------------AKERAYEMLEKVGLEHRINHRPS 140 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCChhhhhCChh
Confidence 98999999998854321110 000 01123457889999888887776
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
. |||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++++..+. +++.++|+.+++. .+|+|++
T Consensus 141 ~-----LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~-tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 141 E-----LSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNT-SFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred h-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCC-EEEEEeCCHHHHh-hcCEEEE
Confidence 6 9999999999999999999999999999999999999999999998764344 4555666677775 4799999
Q ss_pred EcCCeEE
Q 000506 416 LSEGQIV 422 (1458)
Q Consensus 416 L~~G~iv 422 (1458)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999975
No 361
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=330.55 Aligned_cols=215 Identities=20% Similarity=0.300 Sum_probs=175.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcC--C-CceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1458)
.+.++|+++.+. .+.+|+|+|++|++||+++|+|||||||||||++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 588999988763 2358999999999999999999999999999999999743 1 12689999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC----ccccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE----PLTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 1002 (1458)
.+... ...++.++|++|++.+++. ||.||+.+....+.. .+.+..++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1245679999999988875 999999986543211 12233345678889988874 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999986 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 789998875
No 362
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=325.16 Aligned_cols=204 Identities=26% Similarity=0.341 Sum_probs=169.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCC------c---cccceEEEecCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKE------F---VPQRTCAYISQND 253 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~------~---~~~~~~~yv~Q~d 253 (1458)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++
T Consensus 15 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~ 91 (242)
T PRK11124 15 HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQY 91 (242)
T ss_pred eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCc
Confidence 45999999999999999999999999999999999999987 9999999997631 0 1245799999999
Q ss_pred CCCCCCCHHHHHHHhh-hhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccc
Q 000506 254 LHFGEMTVRETMDFSG-RCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADT 332 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 332 (1458)
.+++.+||+||+.+.. ...+.. .. + ....++.+++.+||++..++
T Consensus 92 ~~~~~~tv~e~i~~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gl~~~~~~ 137 (242)
T PRK11124 92 NLWPHLTVQQNLIEAPCRVLGLS----------KD----------Q--------------ALARAEKLLERLRLKPYADR 137 (242)
T ss_pred cccCCCcHHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCChhhhhC
Confidence 9999999999997532 111110 00 0 01123557889999888888
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
.+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++++.++|+.+++.+++|+
T Consensus 138 ~~~~-----LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sh~~~~~~~~~d~ 210 (242)
T PRK11124 138 FPLH-----LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TG-ITQVIVTHEVEVARKTASR 210 (242)
T ss_pred Chhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCE
Confidence 7766 999999999999999999999999999999999999999999999864 34 4566677888899999999
Q ss_pred EEEEcCCeEEEEcChhhH
Q 000506 413 IILLSEGQIVYQGPREKV 430 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~ 430 (1458)
+++|.+|+++++|+++++
T Consensus 211 i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 211 VVYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEEECCEEEEeCCHHHh
Confidence 999999999999998764
No 363
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=4.8e-34 Score=357.75 Aligned_cols=220 Identities=21% Similarity=0.328 Sum_probs=182.4
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|..++++.+|+|.++|++..
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56788887763 24699999999999999999999999999999999998764236899999998764
Q ss_pred ccc----ccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCC-CCCHHHHHHHHHHHHHHcCCCccc-cccccCCCCCCCC
Q 000506 936 QAT----FARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSS-DIDSKTRKMFVDEVMDLVELEPLT-NAMVGLPGVDGLS 1009 (1458)
Q Consensus 936 ~~~----~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LS 1009 (1458)
... .++.+|||+|++.+++.+||+|++.+....+... ....++.+++++++++.+++.+.. +..+ ..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPV-----GDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCch-----hhCC
Confidence 321 2356999999999899999999998864332111 122334456788999999998654 3443 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.||++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999986 57788999999986 78888
Q ss_pred eCCCCc
Q 000506 1090 AGPLGR 1095 (1458)
Q Consensus 1090 ~G~~~~ 1095 (1458)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 887653
No 364
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=327.32 Aligned_cols=206 Identities=23% Similarity=0.323 Sum_probs=166.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDL--KLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|++|++||+++|+|||||||||||++|+|+++|.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 459999999999999999999999999999999999987510 1289999999987532 124569999999888
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc----cccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD----ICAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 331 (1458)
++ +||+||+.|..+..+... .+ ....++.+++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGANK----------KD------------------------LDGVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCCcchhhhhc
Confidence 87 899999998654322100 00 001234567788873 3456
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.+++|
T Consensus 150 ~~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~-~tiiivsH~~~~~~~~~d 221 (258)
T PRK14268 150 SPALS-----LSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--D-YTIVIVTHNMQQAARISD 221 (258)
T ss_pred CChhh-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHHhCC
Confidence 66555 999999999999999999999999999999999999999999999853 4 556667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
+|++|++|++++.|+++++.
T Consensus 222 ~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 365
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-34 Score=324.83 Aligned_cols=215 Identities=23% Similarity=0.317 Sum_probs=175.8
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC--C-ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1458)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..++ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478899988773 24699999999999999999999999999999999998642 1 3689999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1458)
++... ...++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 234567999999998776 799999987643321 1122333456788999999852 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999854 799999999986 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 788888874
No 366
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.9e-34 Score=324.52 Aligned_cols=214 Identities=24% Similarity=0.298 Sum_probs=169.2
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCcccEEEECCeecCCccc----cceEEEecCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKL--DDDLKLTGKIKYCGHEFKEFVP----QRTCAYISQNDLH 255 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~--~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~ 255 (1458)
++++|+|+|++|++||+++|+|||||||||||++|+|++ +|+ +|+|.++|+++..... +..++|++|++.+
T Consensus 12 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~ 88 (243)
T TIGR01978 12 DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEE 88 (243)
T ss_pred CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeeccccc
Confidence 346999999999999999999999999999999999995 566 9999999998765332 2348999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-ccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICADTMV 334 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~v 334 (1458)
++.+||+|++.+............ .... .+ ....++.+++.+||+ ...++.+
T Consensus 89 ~~~~t~~~~~~~~~~~~~~~~~~~---~~~~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 141 (243)
T TIGR01978 89 IPGVSNLEFLRSALNARRSARGEE---PLDL----------LD--------------FLKLLKAKLALLGMDEEFLNRSV 141 (243)
T ss_pred cCCcCHHHHHHHHHHHhhcccccc---cccH----------HH--------------HHHHHHHHHHHcCCchhhccccc
Confidence 999999999987543211000000 0000 00 011345688899997 4566665
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhc-cCEE
Q 000506 335 GDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDL-FDNI 413 (1458)
Q Consensus 335 g~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~-~D~v 413 (1458)
+. .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+ ++|+.++|+.+++... +|++
T Consensus 142 ~~----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~vsH~~~~~~~~~~d~i 215 (243)
T TIGR01978 142 NE----GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PD-RSFLIITHYQRLLNYIKPDYV 215 (243)
T ss_pred cc----CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-cEEEEEEecHHHHHhhcCCeE
Confidence 41 3999999999999999999999999999999999999999999999865 34 4556677778888888 8999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000506 414 ILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 414 ~lL~~G~iv~~G~~~~~~ 431 (1458)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 216 HVLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEEeCCEEEEecCHHHhc
Confidence 999999999999987654
No 367
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-34 Score=328.99 Aligned_cols=205 Identities=27% Similarity=0.360 Sum_probs=169.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCC--c---cccceEEEecCCCC-CC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKE--F---VPQRTCAYISQNDL-HF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 256 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 45999999999999999999999999999999999999988 9999999998742 1 12356999999965 34
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
...|+.||+.+.....+... . + ....++.+++.+||++..++.+++
T Consensus 91 ~~~~~~~~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 136 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVPE----------A----------E--------------ITRRVDEALTLVDAQHFRHQPIQC 136 (271)
T ss_pred ccccHHHHHHHHHHHcCCCH----------H----------H--------------HHHHHHHHHHHcCCHhHhcCCchh
Confidence 45689999987543221100 0 0 011234578889998888887776
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
||||||||++||++|+.+|+++||||||+|||+.++..+.+.|+++++ .+ ++|+.++|+.+++.+++|++++|
T Consensus 137 -----LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tii~vtH~~~~~~~~~d~i~~l 209 (271)
T PRK13638 137 -----LSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QG-NHVIISSHDIDLIYEISDAVYVL 209 (271)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999875 34 45666778888999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000506 417 SEGQIVYQGPREKVL 431 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~~ 431 (1458)
++|++++.|+++++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 368
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-34 Score=325.23 Aligned_cols=219 Identities=25% Similarity=0.275 Sum_probs=176.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... +.+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478899988763 246999999999999999999999999999999999975421 2489999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
++... ...++.++|++|++.+++. ||+||+.+....+.. ....+.++.++++++.+++.+....... ..+.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLH-DSAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhh-cChh
Confidence 87642 2345679999999988874 999999987544321 1223344567888998888532111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GK 225 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999875 689999999986 57788999999985 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14261 226 LIEFDKT 232 (253)
T ss_pred EEEcCCH
Confidence 9888875
No 369
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=326.92 Aligned_cols=207 Identities=22% Similarity=0.311 Sum_probs=165.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDL--KLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
..+|+|+|++|++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 20 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 99 (254)
T PRK14273 20 FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNP 99 (254)
T ss_pred ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeecccc
Confidence 359999999999999999999999999999999999998621 1389999999986421 124579999999888
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCC----ccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGL----DICAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL----~~~~d 331 (1458)
++ +||+||+.|.....+.... .+. ...++..++.+|+ .+..|
T Consensus 100 ~~-~tv~eni~~~~~~~~~~~~-------------------~~~--------------~~~~~~~l~~~~l~~~l~~~~~ 145 (254)
T PRK14273 100 FL-MSIYDNISYGPKIHGTKDK-------------------KKL--------------DEIVEQSLKKSALWNEVKDKLN 145 (254)
T ss_pred cc-CcHHHHHHHHHHhcCCCCH-------------------HHH--------------HHHHHHHHHHhCCchhhHHHHh
Confidence 75 8999999886433211000 000 0123345666776 34456
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + ++++.++|+.+++.+++|
T Consensus 146 ~~~~~-----LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~sH~~~~~~~~~d 217 (254)
T PRK14273 146 TNALS-----LSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--S-YTIIIVTHNMQQAGRISD 217 (254)
T ss_pred CCccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCC
Confidence 66655 999999999999999999999999999999999999999999999853 4 456667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|+++.+|+++++.
T Consensus 218 ~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 218 RTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 370
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.5e-34 Score=367.73 Aligned_cols=207 Identities=28% Similarity=0.402 Sum_probs=169.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 259 (1458)
+++|+|+|++++||+.++|+||||||||||+++|+|++ |+ +|+|.+||+++++... ++.++||+|++.+|+.
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~- 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPHG- 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCCc-
Confidence 46999999999999999999999999999999999999 76 8999999999887653 5789999999999976
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||+|||.++... ..++++.+.++.+.+. + .+ -.|++..||.||+. .
T Consensus 438 TI~eNI~~g~~~----------------------~~~eei~~al~~a~l~--------~-~i--~~lp~G~dT~vge~-G 483 (588)
T PRK11174 438 TLRDNVLLGNPD----------------------ASDEQLQQALENAWVS--------E-FL--PLLPQGLDTPIGDQ-A 483 (588)
T ss_pred CHHHHhhcCCCC----------------------CCHHHHHHHHHHhCHH--------H-HH--HhcccccccccccC-C
Confidence 999999885210 0112223333332221 1 12 24677889999984 4
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
..||||||||++|||||+++|+||+||||||+||+.+...|.+.|+++.+ ++|+|++.|++ +..+.+|+|++|++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~--~~TvIiItHrl--~~i~~aD~Iivl~~G 559 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR--RQTTLMVTHQL--EDLAQWDQIWVMQDG 559 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC--CCEEEEEecCh--HHHHhCCEEEEEeCC
Confidence 55999999999999999999999999999999999999999999998753 56666655554 456779999999999
Q ss_pred eEEEEcChhhHHH
Q 000506 420 QIVYQGPREKVLE 432 (1458)
Q Consensus 420 ~iv~~G~~~~~~~ 432 (1458)
+++.+|+.+++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999998864
No 371
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=9e-33 Score=360.46 Aligned_cols=209 Identities=28% Similarity=0.400 Sum_probs=176.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++|+++. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+.
T Consensus 477 ~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 543 (710)
T TIGR03796 477 YVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIPR 543 (710)
T ss_pred eEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEeH
Confidence 6899999999852 13469999999999999999999999999999999999987 4789999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-------LTNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 1004 (1458)
.+ ..+++.+|||+|++.+++ .|++||+.++. .+.+. +.+.++++..++.+ -.|+.+|..+
T Consensus 544 ~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~~----~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G 613 (710)
T TIGR03796 544 EEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIPD----ADLVRACKDAAIHDVITSRPGGYDAELAEGG 613 (710)
T ss_pred HHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCCH----HHHHHHHHHhCCHHHHHhCcCcccceeccCC
Confidence 43 457889999999999885 69999998641 12222 33566777777654 3467777544
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
.+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....+|++++|++
T Consensus 614 -~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~- 686 (710)
T TIGR03796 614 -ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER- 686 (710)
T ss_pred -CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC-
Confidence 57999999999999999999999999999999999999999999986 4899999999985 5567999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|+++..|+.
T Consensus 687 G~i~~~G~~ 695 (710)
T TIGR03796 687 GKVVQRGTH 695 (710)
T ss_pred CEEEEecCH
Confidence 799999985
No 372
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=7e-34 Score=326.92 Aligned_cols=208 Identities=22% Similarity=0.326 Sum_probs=171.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc------ccceEEEecCCC--
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV------PQRTCAYISQND-- 253 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d-- 253 (1458)
++.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999987 999999999876432 235699999996
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-ccccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICADT 332 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 332 (1458)
.+++.+||+||+.+....... .... .....++.+++.+||+ +..+.
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLTS---------LDES------------------------EQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhcC---------CCHH------------------------HHHHHHHHHHHHcCCChhhhhC
Confidence 466789999999775321100 0000 0011235578899996 56777
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
.++. |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+.+++.+++|+
T Consensus 147 ~~~~-----LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 LPRQ-----LSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFG-TAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred Chhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEeCCHHHHHHHhcE
Confidence 7666 999999999999999999999999999999999999999999999876434 5566677888899999999
Q ss_pred EEEEcCCeEEEEcChhhHH
Q 000506 413 IILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~ 431 (1458)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998864
No 373
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-34 Score=325.15 Aligned_cols=219 Identities=20% Similarity=0.235 Sum_probs=178.2
Q ss_pred eEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEEC
Q 000506 854 LSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISIS 930 (1458)
Q Consensus 854 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~ 930 (1458)
..+..+++++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 4567777766552 356999999999999999999999999999999999987531 268999999
Q ss_pred CeeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000506 931 GYPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGV 1005 (1458)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1458)
|.+... ..+++.++|++|++.++ .+|+.||+.+....+. . ..+..+.++++++.+++.+..+...+ ...
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCc
Confidence 987632 23456799999998877 5999999998754331 1 12334568899999998653322222 234
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe---
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK--- 1082 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~--- 1082 (1458)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 5799999999999999999999999999999999999999999999985 4799999999986 5778899999996
Q ss_pred ----cCcEEEEeCCC
Q 000506 1083 ----RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ----~gG~~~~~G~~ 1093 (1458)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 35899999885
No 374
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-34 Score=326.21 Aligned_cols=209 Identities=24% Similarity=0.368 Sum_probs=167.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCeecCC--c---cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD--LKLTGKIKYCGHEFKE--F---VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~d~~ 255 (1458)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++.. . ..++.++|++|++.+
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (253)
T PRK14267 17 NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNP 96 (253)
T ss_pred eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCcc
Confidence 45999999999999999999999999999999999998762 1238999999998752 1 124579999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 331 (1458)
++.+||.||+.++....+.....+ +. ...++.+++.+||.. ..+
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~~~~------------------~~--------------~~~~~~~l~~~~l~~~~~~~~~ 144 (253)
T PRK14267 97 FPHLTIYDNVAIGVKLNGLVKSKK------------------EL--------------DERVEWALKKAALWDEVKDRLN 144 (253)
T ss_pred CCCCcHHHHHHHHHHhcCccCCHH------------------HH--------------HHHHHHHHHHcCCccchhhhhc
Confidence 999999999988643221100000 00 012345677778742 345
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ + .+++.++|+.+++.+++|
T Consensus 145 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d 216 (253)
T PRK14267 145 DYPSN-----LSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSD 216 (253)
T ss_pred cChhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCC
Confidence 55544 999999999999999999999999999999999999999999999864 4 456667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
+|++|++|++++.|+++++.
T Consensus 217 ~i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 217 YVAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 375
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-34 Score=324.10 Aligned_cols=219 Identities=21% Similarity=0.268 Sum_probs=175.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.++++|+++.+. ++.+|+|+|++|++|++++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 477889888763 245999999999999999999999999999999999987631 2369999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
.+... ...++.++|++|++.+++. ||+||+.+....+.. . ..+..++.++++++.+++.+....... ..+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~-~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT-T-AQSRLDEVVEKSLRQAALWDEVKDNLH-KSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC-C-hhhHHHHHHHHHHHHhCCchhhhhHhh-CCcc
Confidence 87532 1346789999999988875 999999987543311 1 122234557788888887542111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.++|+++. +++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 799999999999999999999999999999999999999999999985 5899999999986 57788999999985 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 8888875
No 376
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.5e-34 Score=316.60 Aligned_cols=199 Identities=23% Similarity=0.283 Sum_probs=166.4
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.+. .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 46778877663 2469999999999999999999999999999999999876 47899999998754
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 936 Q--ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
. ..+++.++|++|++.+++.+||.|++.+....+. . ..++.++++++.+||.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHH
Confidence 2 2345679999999988899999999988654321 1 22356889999999987777654 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEE
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1081 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll 1081 (1458)
||++||+||+.+|++++|||||+|||+.+...+++.|++++++|+|||+++|++. .+.+.-+|++++
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999999877899999999975 354433555544
No 377
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=4.5e-34 Score=321.52 Aligned_cols=202 Identities=28% Similarity=0.339 Sum_probs=167.0
Q ss_pred eeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCCCCCCCHHHHH
Q 000506 186 LKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLHFGEMTVRETM 265 (1458)
Q Consensus 186 L~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 265 (1458)
|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999987 9999999998765332 358999999999999999999
Q ss_pred HHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCCChH
Q 000506 266 DFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGVSGG 345 (1458)
Q Consensus 266 ~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGLSGG 345 (1458)
.+..+..... ..+.+ ....++.+++.+||++..++.+++ ||||
T Consensus 76 ~~~~~~~~~~--------~~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--------LSKSE------------------------RRAIVEEHIALVGLTEAADKRPGQ-----LSGG 118 (230)
T ss_pred HHHHHhcccC--------CCHHH------------------------HHHHHHHHHHHcCCHHHHcCChhh-----CCHH
Confidence 8753210000 00000 011235578899999888888776 9999
Q ss_pred HHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEEEEc
Q 000506 346 QKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIVYQG 425 (1458)
Q Consensus 346 qkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~~G 425 (1458)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ .+|+.++|+.+++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHR-VTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 99999999999999999999999999999999999999999876434 45666778888999999999999999999988
Q ss_pred ChhhH
Q 000506 426 PREKV 430 (1458)
Q Consensus 426 ~~~~~ 430 (1458)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65443
No 378
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=3e-34 Score=316.27 Aligned_cols=195 Identities=26% Similarity=0.301 Sum_probs=167.2
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 4677776653 2468999999999999999999999999999999999876 478999999987532
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 937 --ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
..+++.++|++|++.+++.+||+|++.+.... . ..++++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~------~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD------H---SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc------c---cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHH
Confidence 23557899999999888899999999875311 1 2345789999999988777654 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEE
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1081 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll 1081 (1458)
|++||++|+.+|++|+|||||+|||+.+...+++.|+++.++|+|+|+++|++. ++...+|+++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998878999999999986 677888999876
No 379
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=6e-34 Score=321.82 Aligned_cols=204 Identities=24% Similarity=0.331 Sum_probs=168.6
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc--cccceEEEec-CCCCC
Q 000506 179 KKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF--VPQRTCAYIS-QNDLH 255 (1458)
Q Consensus 179 ~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~-Q~d~~ 255 (1458)
+++.+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|++.... ..++.++|++ |++.+
T Consensus 30 ~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 106 (236)
T cd03267 30 KYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQL 106 (236)
T ss_pred ccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCcccc
Confidence 345567999999999999999999999999999999999999988 99999999875432 2245799997 55677
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
++.+||+|++.+.....+... .+ .....+.+++.+||++..|+.++
T Consensus 107 ~~~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~gl~~~~~~~~~ 152 (236)
T cd03267 107 WWDLPVIDSFYLLAAIYDLPP----------AR------------------------FKKRLDELSELLDLEELLDTPVR 152 (236)
T ss_pred CCCCcHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCChhHhcCChh
Confidence 888999999988644322100 00 01123457888999998898887
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
+ ||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|++++
T Consensus 153 ~-----LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiiivsH~~~~~~~~~d~i~~ 226 (236)
T cd03267 153 Q-----LSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERG-TTVLLTSHYMKDIEALARRVLV 226 (236)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCC-CEEEEEecCHHHHHHhCCEEEE
Confidence 7 999999999999999999999999999999999999999999999876434 4566677778899999999999
Q ss_pred EcCCeEEEEc
Q 000506 416 LSEGQIVYQG 425 (1458)
Q Consensus 416 L~~G~iv~~G 425 (1458)
|.+|++++.|
T Consensus 227 l~~G~i~~~g 236 (236)
T cd03267 227 IDKGRLLYDG 236 (236)
T ss_pred EeCCEEEecC
Confidence 9999998765
No 380
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=324.17 Aligned_cols=201 Identities=25% Similarity=0.397 Sum_probs=168.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 259 (1458)
..+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .
T Consensus 16 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~ 91 (241)
T PRK14250 16 KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-G 91 (241)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-h
Confidence 45999999999999999999999999999999999999987 999999999875432 2457999999988886 6
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-ccccccccCcc
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICADTMVGDQM 338 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~vg~~~ 338 (1458)
||+||+.+.....+ . . ...++.+++.+||+ +..++.+.+
T Consensus 92 tv~e~l~~~~~~~~--~------~------------------------------~~~~~~~l~~~~l~~~~~~~~~~~-- 131 (241)
T PRK14250 92 TVKDNIEYGPMLKG--E------K------------------------------NVDVEYYLSIVGLNKEYATRDVKN-- 131 (241)
T ss_pred hHHHHHhcchhhcC--c------H------------------------------HHHHHHHHHHcCCCHHHhhCCccc--
Confidence 99999976432110 0 0 00134478889996 466666655
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|++
T Consensus 132 ---LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tii~~sH~~~~~~~~~d~i~~l~~ 207 (241)
T PRK14250 132 ---LSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMN-LTVIWITHNMEQAKRIGDYTAFLNK 207 (241)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCC-CEEEEEeccHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999876434 4566677888899999999999999
Q ss_pred CeEEEEcChhhHH
Q 000506 419 GQIVYQGPREKVL 431 (1458)
Q Consensus 419 G~iv~~G~~~~~~ 431 (1458)
|+++..|+++++.
T Consensus 208 G~i~~~~~~~~~~ 220 (241)
T PRK14250 208 GILVEYAKTYDFF 220 (241)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988763
No 381
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-35 Score=302.53 Aligned_cols=216 Identities=26% Similarity=0.415 Sum_probs=186.5
Q ss_pred ccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc---ccccceEEEEccCCCCCCC
Q 000506 879 DRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ---ATFARVSGYCEQNDIHSPH 955 (1458)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 955 (1458)
+.+.+|+++|..|++|.+|+|+|||||||||||.+++++.+ ..+|+|+++|++... ..+++.++.+-|+......
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~r 89 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINSR 89 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhhe
Confidence 45789999999999999999999999999999999999876 589999999998643 4567888999999988899
Q ss_pred CCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000506 956 VTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPT 1035 (1458)
Q Consensus 956 lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1035 (1458)
+||+|-+.|+..-. ......++.+..+++.++.++|++++|+... +||||||||.-||..|+++.+.++||||.
T Consensus 90 lTV~dLv~FGRfPY-SqGRlt~eD~~~I~~aieyl~L~~l~dryLd-----~LSGGQrQRAfIAMVlaQdTdyvlLDEPL 163 (252)
T COG4604 90 LTVRDLVGFGRFPY-SQGRLTKEDRRIINEAIEYLHLEDLSDRYLD-----ELSGGQRQRAFIAMVLAQDTDYVLLDEPL 163 (252)
T ss_pred eEHHHHhhcCCCcc-cCCCCchHHHHHHHHHHHHhcccchHHHhHH-----hcccchhhhhhhheeeeccCcEEEecCcc
Confidence 99999999974322 2233445667789999999999999998864 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCCc--chHHHHHHH
Q 000506 1036 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGR--QSQKLVEYF 1104 (1458)
Q Consensus 1036 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~~--~~~~~~~~f 1104 (1458)
++||...+..+|+.||+++++ |+|||++.||.+. .-.+.|.++-|++ |+++..|++++ ..+.+.+.|
T Consensus 164 NNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~eii~~~~L~eiy 233 (252)
T COG4604 164 NNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPDEIIQPEILSEIY 233 (252)
T ss_pred cccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHHHhcCHHHHHHHh
Confidence 999999999999999999977 9999999999874 4557799999985 89999999864 334444544
No 382
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.4e-34 Score=369.89 Aligned_cols=209 Identities=23% Similarity=0.371 Sum_probs=175.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++||++.+. +++++|+|+|++++|||++||+||||||||||+++|+|.. + .+|+|.+||++.
T Consensus 349 ~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~i 413 (588)
T PRK11174 349 TIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIEL 413 (588)
T ss_pred eEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEec
Confidence 589999986542 1246999999999999999999999999999999999987 4 589999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-------LTNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 1004 (1458)
.+ ..+++.++||+|++.++. -|++||+.++. .+.++ +.++++++..++.+ -.|+.+|..+
T Consensus 414 ~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 414 RELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred ccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 53 457789999999999886 59999998852 12333 33566666666543 3477888654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 484 -~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~- 558 (588)
T PRK11174 484 -AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD- 558 (588)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC-
Confidence 4799999999999999999999999999999999999999999999885 5899999999985 5678999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|+++..|+.
T Consensus 559 G~i~e~G~~ 567 (588)
T PRK11174 559 GQIVQQGDY 567 (588)
T ss_pred CeEeecCCH
Confidence 799999874
No 383
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=327.99 Aligned_cols=210 Identities=26% Similarity=0.395 Sum_probs=172.1
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDLHFGE 258 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 258 (1458)
++++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++.... .++.++|++|++.+++.
T Consensus 14 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (255)
T PRK11231 14 TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEG 90 (255)
T ss_pred CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCC
Confidence 346999999999999999999999999999999999999887 999999999875432 23569999999888888
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
+||.||+.++..... ..+. . ...+ ....++.+++.+||++..++.+++
T Consensus 91 ~tv~~~i~~~~~~~~--~~~~---~-----------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 138 (255)
T PRK11231 91 ITVRELVAYGRSPWL--SLWG---R-----------LSAE--------------DNARVNQAMEQTRINHLADRRLTD-- 138 (255)
T ss_pred ccHHHHHHhccchhh--hhcc---C-----------CCHH--------------HHHHHHHHHHHcCCHHHHcCCccc--
Confidence 999999987531000 0000 0 0000 011235578889998888888777
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++++. + ++++.++|+.+++.+++|++++|++
T Consensus 139 ---LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~-~-~tiii~tH~~~~~~~~~d~i~~l~~ 213 (255)
T PRK11231 139 ---LSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQ-G-KTVVTVLHDLNQASRYCDHLVVLAN 213 (255)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998652 4 4566677888899999999999999
Q ss_pred CeEEEEcChhhHH
Q 000506 419 GQIVYQGPREKVL 431 (1458)
Q Consensus 419 G~iv~~G~~~~~~ 431 (1458)
|+++..|+.+++.
T Consensus 214 G~i~~~~~~~~~~ 226 (255)
T PRK11231 214 GHVMAQGTPEEVM 226 (255)
T ss_pred CeEEEEcCHHHhc
Confidence 9999999987753
No 384
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=6.9e-34 Score=327.21 Aligned_cols=224 Identities=25% Similarity=0.352 Sum_probs=180.4
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
+.++|+++.+.... ..+ ...++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---ccc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67888888764100 000 0013569999999999999999999999999999999999876 47999999998754
Q ss_pred cc------cccceEEEEccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000506 936 QA------TFARVSGYCEQND--IHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVD 1006 (1458)
Q Consensus 936 ~~------~~~~~~gyv~Q~~--~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1006 (1458)
.. ..++.++|++|++ .+.+..|+.|++.+..... ......+..+.++++++.+++. +..++.+ .
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKRP-----P 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCCC-----c
Confidence 21 2456799999997 3567899999987653211 1223444556789999999996 4556553 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. ++.+.+|++++|.+ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 57778999999985 7
Q ss_pred EEEEeCCCC
Q 000506 1086 QVIYAGPLG 1094 (1458)
Q Consensus 1086 ~~~~~G~~~ 1094 (1458)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 899998864
No 385
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-34 Score=317.75 Aligned_cols=195 Identities=24% Similarity=0.361 Sum_probs=164.0
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCCHHHHHH
Q 000506 188 DVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMTVRETMD 266 (1458)
Q Consensus 188 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 266 (1458)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999987 9999999998765332 457999999999999999999998
Q ss_pred HhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCCChHH
Q 000506 267 FSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGVSGGQ 346 (1458)
Q Consensus 267 f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGLSGGq 346 (1458)
+......... +. ....++.+++.+||++..++.+.. |||||
T Consensus 93 ~~~~~~~~~~---------~~-------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 133 (211)
T cd03298 93 LGLSPGLKLT---------AE-------------------------DRQAIEVALARVGLAGLEKRLPGE-----LSGGE 133 (211)
T ss_pred cccccccCcc---------HH-------------------------HHHHHHHHHHHcCCHHHHhCCccc-----CCHHH
Confidence 7532110000 00 011235578899998888887766 99999
Q ss_pred HHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEEEEc
Q 000506 347 KKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIVYQG 425 (1458)
Q Consensus 347 kkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~~G 425 (1458)
|||++||++|+.+|++++|||||+|||..++..+.+.|+++++..+ .+++.++|+.+++.+++|++++|++|+++..|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETK-MTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999999999999875434 45666778889999999999999999998764
No 386
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=6.4e-34 Score=320.53 Aligned_cols=204 Identities=22% Similarity=0.278 Sum_probs=167.9
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCcccEEEECCeecCCccc-cceEEEecCCCC--CCC
Q 000506 185 ILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDD----DLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDL--HFG 257 (1458)
Q Consensus 185 iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~----~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 257 (1458)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999987 6 9999999998765433 257999999974 556
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc---ccccccc
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD---ICADTMV 334 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~---~~~dt~v 334 (1458)
.+|+.|++.+.....+... + .....++.+++.+||+ +..++.+
T Consensus 78 ~~t~~~~~~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~~~ 123 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKLS--K--------------------------------QARALILEALEAVGLPDPEEVLKKYP 123 (230)
T ss_pred ccCHHHHHHHHHHHcCccH--H--------------------------------HHHHHHHHHHHHcCCCchHHHHhCCh
Confidence 7899999977543211100 0 0011245578899997 4456666
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEE
Q 000506 335 GDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNII 414 (1458)
Q Consensus 335 g~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~ 414 (1458)
++ |||||||||+||++|+.+|++++|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++..++|+++
T Consensus 124 ~~-----LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~ 197 (230)
T TIGR02770 124 FQ-----LSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLF-GTGILLITHDLGVVARIADEVA 197 (230)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 65 99999999999999999999999999999999999999999999987633 3456667788889999999999
Q ss_pred EEcCCeEEEEcChhhHH
Q 000506 415 LLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 415 lL~~G~iv~~G~~~~~~ 431 (1458)
+|++|+++..|+++++.
T Consensus 198 ~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 198 VMDDGRIVERGTVKEIF 214 (230)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 387
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=323.09 Aligned_cols=215 Identities=22% Similarity=0.298 Sum_probs=174.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcC--CC-ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 931 (1458)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 478899988763 2469999999999999999999999999999999999753 11 2489999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1458)
.+... ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87632 234568999999998887 6999999886543221 112222345677888887742 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 589999999986 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14255 222 T-GNLIEFADT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 788888875
No 388
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-34 Score=329.68 Aligned_cols=205 Identities=23% Similarity=0.374 Sum_probs=171.6
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCC-CCCCC
Q 000506 184 QILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDL-HFGEM 259 (1458)
Q Consensus 184 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 259 (1458)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 5999999999999999999999999999999999999988 999999999875432 2356999999963 34467
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||+||+.+.....+... . + ....++.+++.+||.+..++.+.+
T Consensus 95 tv~~~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------E----------T--------------VAHRVSSALHMLGLEELRDRVPHH--- 137 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------H----------H--------------HHHHHHHHHHHCCChhHhcCCccc---
Confidence 99999987543221100 0 0 011245688999999888888776
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+.+++.+++|+|++|++|
T Consensus 138 --LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 138 --LSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYG-MTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999876434 56666778888999999999999999
Q ss_pred eEEEEcChhhHH
Q 000506 420 QIVYQGPREKVL 431 (1458)
Q Consensus 420 ~iv~~G~~~~~~ 431 (1458)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998874
No 389
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5e-34 Score=357.40 Aligned_cols=212 Identities=21% Similarity=0.350 Sum_probs=182.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478999998773 2469999999999999999999999999999999999876 4789999999876
Q ss_pred Ccc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQA---T-FARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~~---~-~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
... . .++.+||++|++.+++.+||+|++.+.... .++.++.++++++.++|.+..+..++ .|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPK-------RQASMQKMKQLLAALGCQLDLDSSAG-----SLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhccccc-------chHHHHHHHHHHHHcCCCccccCChh-----hCCH
Confidence 431 1 124699999999999999999999875311 12334568899999999887777654 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.||++++|.+ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999986 57788999999985 788899
Q ss_pred CCCCc
Q 000506 1091 GPLGR 1095 (1458)
Q Consensus 1091 G~~~~ 1095 (1458)
|+...
T Consensus 222 g~~~~ 226 (510)
T PRK15439 222 GKTAD 226 (510)
T ss_pred cChHH
Confidence 88643
No 390
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=316.66 Aligned_cols=232 Identities=23% Similarity=0.310 Sum_probs=184.2
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-C-CCCcccEEEECCeecCCccc-------cceEEEecCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD-D-DLKLTGKIKYCGHEFKEFVP-------QRTCAYISQN 252 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~-~-~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~ 252 (1458)
..++++||||.+++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++..+.. .+.|+||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999997 4 33457999999997755432 2579999999
Q ss_pred C--CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccc
Q 000506 253 D--LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICA 330 (1458)
Q Consensus 253 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 330 (1458)
+ .+.|.+||.+.+.-..+...... .++ +....+..+|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------~~~------------------------ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------SKK------------------------EAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------hhH------------------------HHHHHHHHHHHHcCCCCHH
Confidence 5 58899999998876554321100 000 0112344578899998632
Q ss_pred cccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhcc
Q 000506 331 DTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLF 410 (1458)
Q Consensus 331 dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~ 410 (1458)
. +-+.+...|||||||||.||.||+.+|++||.||||++||..++.+|++.|+++.++ .+++++.++|+..-+.+++
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e-~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQRE-KGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhc
Confidence 1 123344559999999999999999999999999999999999999999999999985 4678888999999999999
Q ss_pred CEEEEEcCCeEEEEcChhhHHHHHHhcCCCCCCCCCHHHHHHHhcC
Q 000506 411 DNIILLSEGQIVYQGPREKVLEFFEYMGFKCPDRKGVADFLQEVTS 456 (1458)
Q Consensus 411 D~v~lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ev~s 456 (1458)
|||+||+.|+||+.|+.+++. +.|.+.-+...+..+..
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~--------~~P~HPYT~~Ll~s~P~ 259 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF--------KNPKHPYTRGLLNSLPR 259 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh--------cCCCChHHHHHHHhCcc
Confidence 999999999999999999874 45655555555544433
No 391
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=326.88 Aligned_cols=205 Identities=27% Similarity=0.381 Sum_probs=170.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-----cccceEEEecCCCC-CC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDL-HF 256 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~-~~ 256 (1458)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .+
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQL 91 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhh
Confidence 35999999999999999999999999999999999999987 99999999987421 12457999999963 33
Q ss_pred CCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 257 GEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 257 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
..+||+||+.+.....+.. +.+ ....+..+++.+||++..++.+++
T Consensus 92 ~~~tv~e~i~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~L~~~~~~~~~~ 137 (275)
T PRK13639 92 FAPTVEEDVAFGPLNLGLS----------KEE------------------------VEKRVKEALKAVGMEGFENKPPHH 137 (275)
T ss_pred ccccHHHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHCCCchhhcCChhh
Confidence 3579999998753211100 000 011234578999999888888877
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++++. +++|+.++|+.+++.+++|++++|
T Consensus 138 -----LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~--~~til~vtH~~~~~~~~~d~i~~l 210 (275)
T PRK13639 138 -----LSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKE--GITIIISTHDVDLVPVYADKVYVM 210 (275)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEecCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998753 455666778888999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000506 417 SEGQIVYQGPREKVL 431 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~~ 431 (1458)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 211 SDGKIIKEGTPKEVF 225 (275)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998874
No 392
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-34 Score=324.30 Aligned_cols=207 Identities=25% Similarity=0.332 Sum_probs=163.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD--DDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|+.+ +....+|+|.++|+++... ..++.++|++|++.+
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 98 (253)
T PRK14242 19 FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNP 98 (253)
T ss_pred eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCC
Confidence 359999999999999999999999999999999999864 1001289999999987531 124579999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 331 (1458)
++ .||+||+.++....+.... + + ....++.+++.+||.+ ..+
T Consensus 99 ~~-~tv~enl~~~~~~~~~~~~-~---~-----------------------------~~~~~~~~l~~~~l~~~~~~~~~ 144 (253)
T PRK14242 99 FP-KSIFENVAYGLRVNGVKDK-A---Y-----------------------------LAERVERSLRHAALWDEVKDRLH 144 (253)
T ss_pred Cc-CcHHHHHHHHHHHcCCCCH-H---H-----------------------------HHHHHHHHHHHcCCchhhhHHhh
Confidence 87 5999999886543221100 0 0 0012344677778743 234
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
..+++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|+.++|+.+++.+++|
T Consensus 145 ~~~~~-----LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~tH~~~~~~~~~d 216 (253)
T PRK14242 145 ESALG-----LSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA--R-YTIIIVTHNMQQAARVSD 216 (253)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CeEEEEEecHHHHHHhCC
Confidence 44444 999999999999999999999999999999999999999999999853 4 456667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
+|++|++|+++..|+++++.
T Consensus 217 ~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 217 VTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999987763
No 393
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.6e-34 Score=327.06 Aligned_cols=209 Identities=24% Similarity=0.415 Sum_probs=163.3
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.+.. +.+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHh
Confidence 56777776531 12458999999999999999999999999999999999976 478999999987532
Q ss_pred ---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHH-----HHHHHHHHHc--CCCccccccccCCCCC
Q 000506 937 ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRK-----MFVDEVMDLV--ELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~vg~~~~~ 1006 (1458)
..+++.++|++|++.+++ .||+||+.+... ........ ...++.++.+ ++.+..+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CC
Confidence 234567999999987764 699999977421 11111100 1122333333 333333332 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++ +|+|||+++|++. ++ +.+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999986 4899999999986 35 56999999985 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 9998875
No 394
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-33 Score=319.32 Aligned_cols=206 Identities=31% Similarity=0.378 Sum_probs=173.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc-ccceEEEecCCCCCCCCCCH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV-PQRTCAYISQNDLHFGEMTV 261 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 261 (1458)
+++++|+|++++|||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++..++.+||
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 46999999999999999999999999999999999999987 999999999876533 24679999999999989999
Q ss_pred HHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCC
Q 000506 262 RETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRG 341 (1458)
Q Consensus 262 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 341 (1458)
+||+.+.....+... + + .....+.+++.+||++..++.+.+
T Consensus 90 ~~nl~~~~~~~~~~~--~------------------~--------------~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (232)
T cd03300 90 FENIAFGLRLKKLPK--A------------------E--------------IKERVAEALDLVQLEGYANRKPSQ----- 130 (232)
T ss_pred HHHHHHHHHhcCCCH--H------------------H--------------HHHHHHHHHHHcCCchhhcCChhh-----
Confidence 999987644321100 0 0 011235578899999888888766
Q ss_pred CChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeE
Q 000506 342 VSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQI 421 (1458)
Q Consensus 342 LSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~i 421 (1458)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+. +|+.++|+.+++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~-tiii~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGI-TFVFVTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998764344 555566777889999999999999999
Q ss_pred EEEcChhhHH
Q 000506 422 VYQGPREKVL 431 (1458)
Q Consensus 422 v~~G~~~~~~ 431 (1458)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999887663
No 395
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4.6e-34 Score=320.47 Aligned_cols=209 Identities=22% Similarity=0.353 Sum_probs=170.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.+. ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478899988763 2469999999999999999999999999999999999876 4789999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCH
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 1010 (1458)
.. ..+++.++|++|++.+++ .||+||+.+....+.. . ..++.++++++.+++. ...++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKNI-----AELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCCc-----ccCCH
Confidence 32 234567999999988877 4999999875443211 1 1134578899999996 3555553 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
|||||++||++|+.+|++++|||||+|||+.+...+.+.|++++++ |.|||+++|++. ++ +.+|++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHh
Confidence 9999999999999999999999999999999999999999998764 899999999986 34 57999999953333333
Q ss_pred eC
Q 000506 1090 AG 1091 (1458)
Q Consensus 1090 ~G 1091 (1458)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 33
No 396
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-34 Score=355.99 Aligned_cols=216 Identities=27% Similarity=0.363 Sum_probs=181.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 478889988763 2459999999999999999999999999999999999876 4789999999876
Q ss_pred Ccc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000506 935 NQA----TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLST 1010 (1458)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1010 (1458)
... ..++.+||++|++.+++.+||+||+.+....+.....+.++.++.++++++.++|.+..+..+ ..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCH
Confidence 421 235679999999999999999999988532111111223444567889999999987666654 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEe
Q 000506 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYA 1090 (1458)
Q Consensus 1011 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~ 1090 (1458)
|||||++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++.+.||++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999888999999999986 57788999999986 677766
Q ss_pred CC
Q 000506 1091 GP 1092 (1458)
Q Consensus 1091 G~ 1092 (1458)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 54
No 397
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-34 Score=328.46 Aligned_cols=204 Identities=23% Similarity=0.327 Sum_probs=167.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc-------ccceEEEecCCC--
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV-------PQRTCAYISQND-- 253 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d-- 253 (1458)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999987 999999999875421 235699999996
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-ccccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICADT 332 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 332 (1458)
.+++ .||+||+.|.....+... . + ....++.+++.+||. ...++
T Consensus 97 ~~~~-~tv~e~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~ 141 (280)
T PRK13649 97 QLFE-ETVLKDVAFGPQNFGVSQ----------E----------E--------------AEALAREKLALVGISESLFEK 141 (280)
T ss_pred hhcc-ccHHHHHHHHHHHcCCCH----------H----------H--------------HHHHHHHHHHHcCCChhhhhC
Confidence 3454 699999987543221100 0 0 011234578889997 45677
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
.+++ |||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ .+ ++|+.++|+.+++.+++|+
T Consensus 142 ~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiiivsH~~~~~~~~~d~ 214 (280)
T PRK13649 142 NPFE-----LSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-SG-MTIVLVTHLMDDVANYADF 214 (280)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeccHHHHHHhCCE
Confidence 7666 999999999999999999999999999999999999999999999875 24 4566677778899999999
Q ss_pred EEEEcCCeEEEEcChhhHH
Q 000506 413 IILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~ 431 (1458)
+++|++|++++.|+++++.
T Consensus 215 i~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 215 VYVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988763
No 398
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=326.22 Aligned_cols=215 Identities=20% Similarity=0.241 Sum_probs=175.8
Q ss_pred eEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEEC
Q 000506 854 LSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISIS 930 (1458)
Q Consensus 854 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~ 930 (1458)
..+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 3688999998763 246999999999999999999999999999999999986421 258999999
Q ss_pred CeeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccc
Q 000506 931 GYPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVG 1001 (1458)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg 1001 (1458)
|++... ..+++.++|++|++.+++. ||.||+.+....+. .. ...++.+++.++.+++.. ..+..
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 158 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK-- 158 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC--
Confidence 987532 2345689999999888774 99999988643321 11 122345677888888742 23332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEE
Q 000506 1002 LPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1081 (1458)
Q Consensus 1002 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll 1081 (1458)
+..||||||||++||+||+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++|
T Consensus 159 ---~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l 233 (274)
T PRK14265 159 ---GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFF 233 (274)
T ss_pred ---cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999865 799999999986 588899999999
Q ss_pred e--------cCcEEEEeCCC
Q 000506 1082 K--------RGGQVIYAGPL 1093 (1458)
Q Consensus 1082 ~--------~gG~~~~~G~~ 1093 (1458)
+ +.|++++.|+.
T Consensus 234 ~~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 234 NTEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred ecccccccccCceEEEeCCH
Confidence 7 25899999986
No 399
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-34 Score=326.78 Aligned_cols=209 Identities=23% Similarity=0.341 Sum_probs=171.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 259 (1458)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 46999999999999999999999999999999999999987 999999999875432 235699999998888889
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||.||+.+...... .. . +. ...+ ....++.+++.+||++..++.+++
T Consensus 101 tv~e~l~~~~~~~~-~~-~-------------~~-~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 147 (265)
T PRK10575 101 TVRELVAIGRYPWH-GA-L-------------GR-FGAA--------------DREKVEEAISLVGLKPLAHRLVDS--- 147 (265)
T ss_pred cHHHHHHhCccccc-cc-c-------------cC-CCHH--------------HHHHHHHHHHHcCCHHHhcCCccc---
Confidence 99999987532100 00 0 00 0000 011235578899998888888877
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|++|
T Consensus 148 --LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~-~tiii~sH~~~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 148 --LSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERG-LTVIAVLHDINMAARYCDYLVALRGG 224 (265)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999875434 45666778888999999999999999
Q ss_pred eEEEEcChhhH
Q 000506 420 QIVYQGPREKV 430 (1458)
Q Consensus 420 ~iv~~G~~~~~ 430 (1458)
+++..|+.+++
T Consensus 225 ~i~~~~~~~~~ 235 (265)
T PRK10575 225 EMIAQGTPAEL 235 (265)
T ss_pred eEEEecCHHHh
Confidence 99999998775
No 400
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-34 Score=327.02 Aligned_cols=210 Identities=25% Similarity=0.380 Sum_probs=172.9
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDLHFGE 258 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 258 (1458)
...+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 19 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~ 95 (265)
T PRK10253 19 KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGD 95 (265)
T ss_pred CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCC
Confidence 346999999999999999999999999999999999999987 9999999998754322 3569999999998888
Q ss_pred CCHHHHHHHhhhhc-cCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCc
Q 000506 259 MTVRETMDFSGRCL-GVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQ 337 (1458)
Q Consensus 259 lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 337 (1458)
+||+||+.+...-. ...... ... ....++.+++.+||++..++.+.+
T Consensus 96 ~tv~~~~~~~~~~~~~~~~~~-----------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~- 143 (265)
T PRK10253 96 ITVQELVARGRYPHQPLFTRW-----------------RKE--------------DEEAVTKAMQATGITHLADQSVDT- 143 (265)
T ss_pred CcHHHHHHhCcccccccccCC-----------------CHH--------------HHHHHHHHHHHcCCHHHhcCCccc-
Confidence 99999998742100 000000 000 011235578899998877887766
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++..+ ++++.++|+..++.+++|++++|+
T Consensus 144 ----LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~-~tiii~tH~~~~~~~~~d~i~~l~ 218 (265)
T PRK10253 144 ----LSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKG-YTLAAVLHDLNQACRYASHLIALR 218 (265)
T ss_pred ----CChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875334 456667788889999999999999
Q ss_pred CCeEEEEcChhhHH
Q 000506 418 EGQIVYQGPREKVL 431 (1458)
Q Consensus 418 ~G~iv~~G~~~~~~ 431 (1458)
+|++++.|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (265)
T PRK10253 219 EGKIVAQGAPKEIV 232 (265)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 401
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-34 Score=326.53 Aligned_cols=215 Identities=22% Similarity=0.232 Sum_probs=174.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcC--C-CceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1458)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 588999998763 2358999999999999999999999999999999999864 1 13789999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC----ccccccccC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELE----PLTNAMVGL 1002 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 1002 (1458)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ..+.+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87632 234567999999998877 499999988653321 112222344567778777543 223333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1003 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1003 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 799999999986 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000506 1083 RGGQVIYAGPL 1093 (1458)
Q Consensus 1083 ~gG~~~~~G~~ 1093 (1458)
+ |++++.|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 5 789888875
No 402
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.9e-33 Score=321.43 Aligned_cols=220 Identities=23% Similarity=0.310 Sum_probs=176.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 478899988763 2359999999999999999999999999999999999731124789999999876
Q ss_pred Ccc---cccc-eEEEEccCCCCCCCCCHHHHHHHHHhhhcC----CCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000506 935 NQA---TFAR-VSGYCEQNDIHSPHVTVYESLLFSAWLRLS----SDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGV 1005 (1458)
Q Consensus 935 ~~~---~~~~-~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 1005 (1458)
... ..++ .++|++|++.+++.+|+.|++.+....... .+....+..+.++++++.+++. +..++.++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 432 2222 478999999999999999998875432110 0112223345678899999997 34555432
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-hceEEEEecC
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLMKRG 1084 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~-~D~vlll~~g 1084 (1458)
.+||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 259999999999999999999999999999999999999999999999877999999999976 35444 799999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 799999876
No 403
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4.6e-34 Score=318.07 Aligned_cols=195 Identities=26% Similarity=0.377 Sum_probs=163.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-----cccceEEEecCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLHFG 257 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 257 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 46999999999999999999999999999999999999987 99999999987421 12467999999999999
Q ss_pred CCCHHHHHHHhhh-hccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccC
Q 000506 258 EMTVRETMDFSGR-CLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGD 336 (1458)
Q Consensus 258 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 336 (1458)
.+||+||+.+... .++.. ..+ ....++.+++.+||++..++.+.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 135 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS----------KAE------------------------AEERALELLEKVGLADKADAYPAQ 135 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCCHhHhhhCccc
Confidence 9999999987532 11100 000 011234578889998888888776
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+ ++++.++|+.+++.+++|++++|
T Consensus 136 -----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 136 -----LSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999975 34 45666778888999999999999
Q ss_pred cCCeE
Q 000506 417 SEGQI 421 (1458)
Q Consensus 417 ~~G~i 421 (1458)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 404
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=327.92 Aligned_cols=205 Identities=25% Similarity=0.331 Sum_probs=170.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc----ccceEEEecCCCC-CCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV----PQRTCAYISQNDL-HFG 257 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 257 (1458)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999988 999999999876421 2467999999974 233
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCc
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQ 337 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 337 (1458)
..||.|++.|.....+... . + ....++.+++.+||++..++.+++
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~gL~~~~~~~~~~- 144 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------E----------E--------------IRERVDESLKKVGMYEYRRHAPHL- 144 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------H----------H--------------HHHHHHHHHHHCCCHhHhhCCccc-
Confidence 4699999988654221100 0 0 011245688999999988888877
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.. +|++++|+
T Consensus 145 ----LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 145 ----LSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYG-ITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecChHHHhc-CCEEEEEE
Confidence 999999999999999999999999999999999999999999999976434 455556677777765 99999999
Q ss_pred CCeEEEEcChhhHH
Q 000506 418 EGQIVYQGPREKVL 431 (1458)
Q Consensus 418 ~G~iv~~G~~~~~~ 431 (1458)
+|+++++|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998875
No 405
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=6.7e-34 Score=325.65 Aligned_cols=208 Identities=27% Similarity=0.409 Sum_probs=171.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 259 (1458)
..+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 46999999999999999999999999999999999999987 9999999998765322 34699999998777889
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||+||+.+...... ... .. +..+ ....++.+++.+||.+..++.+++
T Consensus 91 tv~e~l~~~~~~~~---------~~~------~~-~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (256)
T TIGR03873 91 TVRDVVALGRIPHR---------SLW------AG-DSPH--------------DAAVVDRALARTELSHLADRDMST--- 137 (256)
T ss_pred CHHHHHHhcchhhh---------hhc------cC-CCHH--------------HHHHHHHHHHHcCcHhhhcCCccc---
Confidence 99999987421000 000 00 0000 011234578889998888888776
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++|+.++|+.+++.+++|+|++|++|
T Consensus 138 --LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 138 --LSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-TG-VTVVAALHDLNLAASYCDHVVVLDGG 213 (256)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999864 24 56666778888999999999999999
Q ss_pred eEEEEcChhhH
Q 000506 420 QIVYQGPREKV 430 (1458)
Q Consensus 420 ~iv~~G~~~~~ 430 (1458)
+++.+|+.+++
T Consensus 214 ~i~~~g~~~~~ 224 (256)
T TIGR03873 214 RVVAAGPPREV 224 (256)
T ss_pred CEEEecCHHHh
Confidence 99999998775
No 406
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=325.60 Aligned_cols=205 Identities=24% Similarity=0.333 Sum_probs=168.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCC-CCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDL-HFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 258 (1458)
+.+|+|+|+++++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++.... .++.++|++|++. +++.
T Consensus 22 ~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (269)
T PRK13648 22 SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVG 98 (269)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhccc
Confidence 35899999999999999999999999999999999999987 999999999875432 2457999999974 6778
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
.|+++|+.|.....+.. .+ + ....++.+++.+||.+..|+.+++
T Consensus 99 ~~v~~~~~~~~~~~~~~--~~------------------~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 142 (269)
T PRK13648 99 SIVKYDVAFGLENHAVP--YD------------------E--------------MHRRVSEALKQVDMLERADYEPNA-- 142 (269)
T ss_pred ccHHHHHHhhHHhcCCC--HH------------------H--------------HHHHHHHHHHHcCCchhhhCCccc--
Confidence 89999998864322110 00 0 011234578899998888877766
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.| ++.++|+.+++.. +|+|++|++
T Consensus 143 ---LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~t-iiivtH~~~~~~~-~d~i~~l~~ 217 (269)
T PRK13648 143 ---LSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNIT-IISITHDLSEAME-ADHVIVMNK 217 (269)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCchHHhc-CCEEEEEEC
Confidence 99999999999999999999999999999999999999999999987543444 5555666677765 999999999
Q ss_pred CeEEEEcChhhHH
Q 000506 419 GQIVYQGPREKVL 431 (1458)
Q Consensus 419 G~iv~~G~~~~~~ 431 (1458)
|++++.|+++++.
T Consensus 218 G~i~~~g~~~~~~ 230 (269)
T PRK13648 218 GTVYKEGTPTEIF 230 (269)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 407
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.1e-33 Score=318.33 Aligned_cols=198 Identities=24% Similarity=0.355 Sum_probs=163.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-------cceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-------QRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 255 (1458)
.++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35999999999999999999999999999999999999988 9999999998765322 2469999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
++.+||.||+.+.....+... ++ ....++.+++.+||.+..++.+.
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~~--------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 145 (228)
T PRK10584 100 IPTLNALENVELPALLRGESS--------------------RQ--------------SRNGAKALLEQLGLGKRLDHLPA 145 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCCH--------------------HH--------------HHHHHHHHHHHcCCHhHhhCChh
Confidence 999999999987543221100 00 01123557889999888888877
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
+ ||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+. +|+.++|+.+++ +.+|++++
T Consensus 146 ~-----LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~-tii~~sH~~~~~-~~~d~i~~ 218 (228)
T PRK10584 146 Q-----LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGT-TLILVTHDLQLA-ARCDRRLR 218 (228)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCC-EEEEEecCHHHH-HhCCEEEE
Confidence 6 9999999999999999999999999999999999999999999998754344 455566666676 45999999
Q ss_pred EcCCeEEEE
Q 000506 416 LSEGQIVYQ 424 (1458)
Q Consensus 416 L~~G~iv~~ 424 (1458)
|++|++++.
T Consensus 219 l~~g~i~~~ 227 (228)
T PRK10584 219 LVNGQLQEE 227 (228)
T ss_pred EECCEEEec
Confidence 999999753
No 408
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=325.44 Aligned_cols=208 Identities=24% Similarity=0.323 Sum_probs=166.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD--LKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 32 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 111 (267)
T PRK14235 32 KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNP 111 (267)
T ss_pred EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCC
Confidence 45999999999999999999999999999999999998741 01289999999987531 124579999999888
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 331 (1458)
++. ||.||+.|+.+..+.... +. + ....++.+++.+||.+ ..+
T Consensus 112 ~~~-tv~enl~~~~~~~~~~~~--------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~ 158 (267)
T PRK14235 112 FPK-SIYENVAYGPRIHGLARS--------KA----------E--------------LDEIVETSLRKAGLWEEVKDRLH 158 (267)
T ss_pred CCC-cHHHHHHHHHHhcccccc--------hH----------H--------------HHHHHHHHHHHcCCchhhhHHhh
Confidence 875 999999886543221000 00 0 0012345778888854 234
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ + .+|+.++|+.+++.+++|
T Consensus 159 ~~~~~-----LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d 230 (267)
T PRK14235 159 EPGTG-----LSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQ 230 (267)
T ss_pred CCccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCC
Confidence 44544 999999999999999999999999999999999999999999999864 4 456667778889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|+++.+|+.+++.
T Consensus 231 ~v~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 231 RTAFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999987763
No 409
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=7.2e-34 Score=326.49 Aligned_cols=216 Identities=25% Similarity=0.302 Sum_probs=172.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc--------ccceEEEecCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV--------PQRTCAYISQNDL 254 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--------~~~~~~yv~Q~d~ 254 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+...+|+|.++|+++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 46999999999999999999999999999999999999875223699999999875321 1356999999999
Q ss_pred CCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccc
Q 000506 255 HFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMV 334 (1458)
Q Consensus 255 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 334 (1458)
+++.+||+||+.+....... . ..... .. ..+ +....++.+++.+||++..|+.+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~---~------~~~~~--~~-~~~--------------~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGSTP---F------WRTCF--SW-FTR--------------EQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhccccc---c------hhhhc--cc-ccH--------------HHHHHHHHHHHHcCCHHHHhCCc
Confidence 99999999999875321000 0 00000 00 000 01113456889999988888887
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEE
Q 000506 335 GDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNII 414 (1458)
Q Consensus 335 g~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~ 414 (1458)
++ |||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++++.. +++++.++|+.+++.+++|+|+
T Consensus 151 ~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 ST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred cc-----cCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 77 99999999999999999999999999999999999999999999997643 3566667788888999999999
Q ss_pred EEcCCeEEEEcChhhH
Q 000506 415 LLSEGQIVYQGPREKV 430 (1458)
Q Consensus 415 lL~~G~iv~~G~~~~~ 430 (1458)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 410
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=330.93 Aligned_cols=215 Identities=17% Similarity=0.219 Sum_probs=170.9
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcccEEEECCeecCCccc-------cceEEEecCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDL-KLTGKIKYCGHEFKEFVP-------QRTCAYISQND 253 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 253 (1458)
...+|+|||++|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~ 98 (330)
T PRK15093 19 WVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEP 98 (330)
T ss_pred CEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCc
Confidence 3569999999999999999999999999999999999986421 238999999998765432 24699999997
Q ss_pred C--CCCCCCHHHHHHHhhhhccC-CchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc--
Q 000506 254 L--HFGEMTVRETMDFSGRCLGV-GTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI-- 328 (1458)
Q Consensus 254 ~--~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-- 328 (1458)
. +.|.+||.+++.+....... +... .+. . +....+..+++.+||++
T Consensus 99 ~~~l~p~~tv~~~l~~~~~~~~~~~~~~------~~~---------~--------------~~~~~~~~~L~~~gL~~~~ 149 (330)
T PRK15093 99 QSCLDPSERVGRQLMQNIPGWTYKGRWW------QRF---------G--------------WRKRRAIELLHRVGIKDHK 149 (330)
T ss_pred chhcCccccHHHHHHHHHHhhhcccccc------ccH---------H--------------HHHHHHHHHHHHCCCCChH
Confidence 5 67889999999764221100 0000 000 0 00112456899999975
Q ss_pred -cccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHH
Q 000506 329 -CADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAY 407 (1458)
Q Consensus 329 -~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~ 407 (1458)
..++.+.+ |||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+.. +++++.++|+...+.
T Consensus 150 ~~~~~~p~~-----LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~tii~itHdl~~v~ 223 (330)
T PRK15093 150 DAMRSFPYE-----LTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNN-NTTILLISHDLQMLS 223 (330)
T ss_pred HHHhCCchh-----CCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHH
Confidence 34555555 99999999999999999999999999999999999999999999997643 456777889999999
Q ss_pred hccCEEEEEcCCeEEEEcChhhHH
Q 000506 408 DLFDNIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 408 ~~~D~v~lL~~G~iv~~G~~~~~~ 431 (1458)
+++|+|++|++|+|++.|+.+++.
T Consensus 224 ~~~dri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 224 QWADKINVLYCGQTVETAPSKELV 247 (330)
T ss_pred HhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999998874
No 411
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=322.04 Aligned_cols=207 Identities=24% Similarity=0.347 Sum_probs=166.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCeecCCcc-----ccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD--LKLTGKIKYCGHEFKEFV-----PQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 255 (1458)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+|. ...+|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 45999999999999999999999999999999999998751 113899999999875321 24569999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc----cccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD----ICAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 331 (1458)
++ +||+||+.|.....+.... .+ ....++.+++.+||. +..+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK---------KE------------------------LDKIVEWALKKAALWDEVKDDLK 142 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH---------HH------------------------HHHHHHHHHHHcCCchhhhhHhh
Confidence 87 8999999886443221000 00 001233467777774 3345
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ ||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.+ + .+++.++|+.+++.+++|
T Consensus 143 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d 214 (251)
T PRK14270 143 KSALK-----LSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSD 214 (251)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcC
Confidence 55544 999999999999999999999999999999999999999999999865 4 455666777889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|++++.|+.+++.
T Consensus 215 ~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 215 YTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEEEEECCeEEEeCCHHHHh
Confidence 99999999999999998864
No 412
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-34 Score=291.12 Aligned_cols=206 Identities=22% Similarity=0.332 Sum_probs=177.8
Q ss_pred cccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc----------------ccccc
Q 000506 878 EDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ----------------ATFAR 941 (1458)
Q Consensus 878 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~ 941 (1458)
++...+|++||+..+.|+++.|+|.|||||||+|++|.=+.+ +..|.|.+||..+.. ...|.
T Consensus 16 ~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs 93 (256)
T COG4598 16 YGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRT 93 (256)
T ss_pred cccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHH
Confidence 356779999999999999999999999999999999998766 579999999975310 12344
Q ss_pred eEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHH
Q 000506 942 VSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVE 1021 (1458)
Q Consensus 942 ~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~a 1021 (1458)
..|+|+|+.+++.++||.||+.-+.. . -...++.+..++++..|..+|+.+.+|.+.. .|||||+||++||||
T Consensus 94 ~L~mVFQ~FNLWsHmtvLeNViEaPv-h-VLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~-----~LSGGQQQR~aIARa 166 (256)
T COG4598 94 RLGMVFQHFNLWSHMTVLENVIEAPV-H-VLGVSKAEAIERAEKYLAKVGIAEKADAYPA-----HLSGGQQQRVAIARA 166 (256)
T ss_pred HhhHhhhhcchhHHHHHHHHHHhcch-H-hhcCCHHHHHHHHHHHHHHhCchhhhhcCcc-----ccCchHHHHHHHHHH
Confidence 67999999999999999999975432 1 1234566777889999999999999987743 799999999999999
Q ss_pred HhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1022 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1022 L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
|+.+|+++++|||||.|||+-.-++.+.+++++++|+|.+++||.+.. ..+...+++.|.+ |.+...||+.
T Consensus 167 LameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P~ 237 (256)
T COG4598 167 LAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPPE 237 (256)
T ss_pred HhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCChH
Confidence 999999999999999999999999999999999999999999998764 5667799999986 7999999973
No 413
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.4e-33 Score=324.59 Aligned_cols=207 Identities=21% Similarity=0.240 Sum_probs=170.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCC--CCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDL--HFG 257 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 257 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999988 9999999998753221 346999999974 577
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-ccccccccC
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICADTMVGD 336 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~vg~ 336 (1458)
.+||.|++.+..+...... .. + ....++.+++.+||. +..++.+.+
T Consensus 103 ~~tv~~~l~~~~~~~~~~~---------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~~ 149 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLE---------PE----------Q--------------REKQIIETLRQVGLLPDHASYYPHM 149 (267)
T ss_pred chhHHHHHHHHHHhccCCC---------HH----------H--------------HHHHHHHHHHHcCCChHHHhcCchh
Confidence 8899999987544211000 00 0 011235578999994 566766665
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEE
Q 000506 337 QMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILL 416 (1458)
Q Consensus 337 ~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL 416 (1458)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|++++|
T Consensus 150 -----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 150 -----LAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQG-ISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred -----cCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-cEEEEEeCCHHHHHHhcCEEEEE
Confidence 999999999999999999999999999999999999999999999876434 45666778888999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000506 417 SEGQIVYQGPREKVL 431 (1458)
Q Consensus 417 ~~G~iv~~G~~~~~~ 431 (1458)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 414
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-34 Score=354.89 Aligned_cols=206 Identities=25% Similarity=0.349 Sum_probs=175.2
Q ss_pred ceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc----cccceEEEEccCCCCCCCC
Q 000506 881 LQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA----TFARVSGYCEQNDIHSPHV 956 (1458)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~l 956 (1458)
+.+|+|||+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|++.... ..++.++|++|++.+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 469999999999999999999999999999999999876 4789999999876421 2346799999999888999
Q ss_pred CHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000506 957 TVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1458)
Q Consensus 957 TV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTs 1036 (1458)
||+|++.+..........+.++..+.++++++.+++.+..++.+ ..|||||||||+||++|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999987532111111123344567899999999988777665 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCCc
Q 000506 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGR 1095 (1458)
Q Consensus 1037 gLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~~ 1095 (1458)
|||+.+...+++.|++++++|+|||+++|++. ++.+.||++++|++ |+++..|+...
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 99999999999999999888999999999986 57788999999985 79999988654
No 415
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.2e-32 Score=356.44 Aligned_cols=210 Identities=22% Similarity=0.384 Sum_probs=176.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++|.++. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|... +.+|+|++||.+.
T Consensus 473 ~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEEH
Confidence 5899999998841 2469999999999999999999999999999999999987 4789999999986
Q ss_pred C---cccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCCC
Q 000506 935 N---QATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-------LTNAMVGLPG 1004 (1458)
Q Consensus 935 ~---~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 1004 (1458)
. ...+++.+|||+|++.+++. |++||+.++.. .+.+. +.+.++++..++.+ -.|+.+|..
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~----~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~- 608 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK----ENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE- 608 (708)
T ss_pred HHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC----CCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC-
Confidence 4 34577899999999998864 99999987521 12222 23566666666643 346777754
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~- 683 (708)
T TIGR01193 609 GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH- 683 (708)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999985 4899999999985 5678999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|+++..|+.
T Consensus 684 G~i~~~G~~ 692 (708)
T TIGR01193 684 GKIIEQGSH 692 (708)
T ss_pred CEEEEECCH
Confidence 799999984
No 416
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=2.5e-32 Score=352.56 Aligned_cols=123 Identities=24% Similarity=0.312 Sum_probs=99.5
Q ss_pred CCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCEEE
Q 000506 955 HVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL-TNAMVGLPGVDGLSTEQRKRLTIAVELVA---NPSIIF 1030 (1458)
Q Consensus 955 ~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~ia~aL~~---~p~ill 1030 (1458)
.+||.|.+.|...+. . .....++++.+||... .+.. .+.|||||+||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~------i~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---S------ISRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---c------hhHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 466777776654321 0 1124578888999753 3444 34799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe-----cCcEEEEeCCC
Q 000506 1031 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK-----RGGQVIYAGPL 1093 (1458)
Q Consensus 1031 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~-----~gG~~~~~G~~ 1093 (1458)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999985 446799999994 57899999985
No 417
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-34 Score=305.25 Aligned_cols=168 Identities=27% Similarity=0.434 Sum_probs=149.4
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEccc
Confidence 4677777653 2358999999999999999999999999999999999876 478999999987643
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 937 --ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
...++.++|++|++.+++..||+|++. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999999888899999873 8999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|++. ++.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877999999999986 577789999999864
No 418
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3e-34 Score=304.00 Aligned_cols=214 Identities=21% Similarity=0.315 Sum_probs=188.3
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccccceEEEecCCCCC
Q 000506 176 LPSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVPQRTCAYISQNDLH 255 (1458)
Q Consensus 176 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~ 255 (1458)
++++.+.+++++|+||.++||+|++++|||||||||.+++|.|++.|+ +|+|+++|.+++... +.+|||+|.+--+
T Consensus 8 vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGL 83 (300)
T COG4152 8 VTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGL 83 (300)
T ss_pred chhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhcc
Confidence 345567788999999999999999999999999999999999999998 999999999887543 4579999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
++.+||.|.|.|-++++|.... + .....+..|+.+++......+|-
T Consensus 84 y~k~tv~dql~yla~LkGm~~~-----e-----------------------------~~~~~~~wLer~~i~~~~~~kIk 129 (300)
T COG4152 84 YPKMTVEDQLKYLAELKGMPKA-----E-----------------------------IQKKLQAWLERLEIVGKKTKKIK 129 (300)
T ss_pred CccCcHHHHHHHHHHhcCCcHH-----H-----------------------------HHHHHHHHHHhccccccccchHH
Confidence 9999999999999999876421 1 11234668999999888888877
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
+ ||-|.+|++.+-.+++.+|++++||||+|||||.++..+-+.+.++... +++|+..+|.++.+.++||++++
T Consensus 130 ~-----LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~--GatIifSsH~Me~vEeLCD~llm 202 (300)
T COG4152 130 E-----LSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEE--GATIIFSSHRMEHVEELCDRLLM 202 (300)
T ss_pred H-----hhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhc--CCEEEEecchHHHHHHHhhhhhe
Confidence 6 9999999999999999999999999999999999999999999999763 45556667889999999999999
Q ss_pred EcCCeEEEEcChhhHHHHH
Q 000506 416 LSEGQIVYQGPREKVLEFF 434 (1458)
Q Consensus 416 L~~G~iv~~G~~~~~~~~F 434 (1458)
|++|+.|.+|+.+++..-|
T Consensus 203 L~kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 203 LKKGQTVLYGTVEDIRRSF 221 (300)
T ss_pred ecCCceEEeccHHHHHHhc
Confidence 9999999999999998743
No 419
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=6.1e-34 Score=311.25 Aligned_cols=178 Identities=25% Similarity=0.331 Sum_probs=151.9
Q ss_pred ceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc-----ccccceEEEEccCCC-CCC
Q 000506 881 LQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ-----ATFARVSGYCEQNDI-HSP 954 (1458)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~~ 954 (1458)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 569999999999999999999999999999999999876 478999999987631 134567999999973 333
Q ss_pred CCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000506 955 HVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1458)
Q Consensus 955 ~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1034 (1458)
..||+||+.+..... ..+.++..+.++++++.++|.+..++.+ ..||||||||++||+||+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 579999999865422 2233444567889999999988777764 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCcc
Q 000506 1035 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1068 (1458)
Q Consensus 1035 TsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s 1068 (1458)
|+|||+.+...+.+.|++++++|+|||+++|++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999878999999999874
No 420
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=323.98 Aligned_cols=218 Identities=19% Similarity=0.231 Sum_probs=174.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478999988763 246899999999999999999999999999999999975421 2689999999
Q ss_pred eeCC-----cccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000506 932 YPKN-----QATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 932 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
.+.. ...+++.++|++|++.+++ .||.||+.+....+. .. .+.++.++++++.+++.+..+.... ..+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcc
Confidence 8753 1234567999999988887 499999988654321 11 1233456778888887532111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEec---
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR--- 1083 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~--- 1083 (1458)
.||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.||++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999975 589999999986 68899999999972
Q ss_pred -----CcEEEEeCCC
Q 000506 1084 -----GGQVIYAGPL 1093 (1458)
Q Consensus 1084 -----gG~~~~~G~~ 1093 (1458)
.|++++.|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 4799999875
No 421
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-34 Score=365.71 Aligned_cols=216 Identities=27% Similarity=0.450 Sum_probs=182.8
Q ss_pred ccccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecC
Q 000506 175 ILPSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQ 251 (1458)
Q Consensus 175 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q 251 (1458)
+.++.++..+||+|+|+++++|+.+||+|||||||||...+|-..++|+ +|+|.++|+++++.+. |+++|.|+|
T Consensus 995 F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQ 1071 (1228)
T KOG0055|consen 995 FAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQ 1071 (1228)
T ss_pred eeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceecc
Confidence 3456678889999999999999999999999999999999999999998 9999999999998765 688999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccc
Q 000506 252 NDLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICAD 331 (1458)
Q Consensus 252 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d 331 (1458)
+|.||.. |+||||.|+... . ..+++++|+.+++ ..+. +.+|++..|
T Consensus 1072 EP~LF~~-TIrENI~YG~~~--v-----------------------s~~eIi~Aak~AN-----aH~F---I~sLP~GyD 1117 (1228)
T KOG0055|consen 1072 EPVLFNG-TIRENIAYGSEE--V-----------------------SEEEIIEAAKLAN-----AHNF---ISSLPQGYD 1117 (1228)
T ss_pred Cchhhcc-cHHHHHhccCCC--C-----------------------CHHHHHHHHHHhh-----hHHH---HhcCcCccc
Confidence 9999966 999999997210 1 1123344444332 2233 346999999
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
|.||+. ...||||||||++||||+++||+||||||.||+||+++..-+.+.|.+... ++|+|++.|.. .+.+.+|
T Consensus 1118 T~vGer-G~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~--gRT~IvIAHRL--STIqnaD 1192 (1228)
T KOG0055|consen 1118 TRVGER-GVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAME--GRTTIVIAHRL--STIQNAD 1192 (1228)
T ss_pred CccCcc-cCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhc--CCcEEEEecch--hhhhcCC
Confidence 999983 233999999999999999999999999999999999999999999999864 67887766554 5788999
Q ss_pred EEEEEcCCeEEEEcChhhHHH
Q 000506 412 NIILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~~ 432 (1458)
.|+|+++|+|+++|+.++++.
T Consensus 1193 ~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1193 VIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred EEEEEECCEEEecccHHHHHh
Confidence 999999999999999999875
No 422
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=311.18 Aligned_cols=197 Identities=28% Similarity=0.455 Sum_probs=173.5
Q ss_pred eceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc-------ccceEEEecCCCCCCCCC
Q 000506 187 KDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV-------PQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 187 ~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~l 259 (1458)
=++++..+.-.+|||-|+||||||||+|+|+|+++|+ +|.|.+||+.+.+.. .+|.+|||+|+..+||++
T Consensus 15 l~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~ 91 (352)
T COG4148 15 LDANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHY 91 (352)
T ss_pred EEEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccce
Confidence 3677887775799999999999999999999999999 999999999764321 257899999999999999
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
||+-||.|+...- .....|.+.+.||++|..+.++..
T Consensus 92 tVrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~P~~--- 128 (352)
T COG4148 92 TVRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRYPGT--- 128 (352)
T ss_pred EEecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhCCCc---
Confidence 9999999964311 001236688999999999999887
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
|||||||||+|||||++.|++|+||||.+.||-..+.+++-.|.++.++.+ .-|+.++|..+|+.+++|+|++|++|
T Consensus 129 --LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~-IPIlYVSHS~~Ev~RLAd~vV~le~G 205 (352)
T COG4148 129 --LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEIN-IPILYVSHSLDEVLRLADRVVVLENG 205 (352)
T ss_pred --cCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcC-CCEEEEecCHHHHHhhhheEEEecCC
Confidence 999999999999999999999999999999999999999999999998754 55667788899999999999999999
Q ss_pred eEEEEcChhhHHH
Q 000506 420 QIVYQGPREKVLE 432 (1458)
Q Consensus 420 ~iv~~G~~~~~~~ 432 (1458)
++...|+.+++..
T Consensus 206 kV~A~g~~e~v~~ 218 (352)
T COG4148 206 KVKASGPLEEVWG 218 (352)
T ss_pred eEEecCcHHHHhc
Confidence 9999999999853
No 423
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.8e-33 Score=321.69 Aligned_cols=215 Identities=27% Similarity=0.328 Sum_probs=174.2
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCee-
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYP- 933 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~- 933 (1458)
.++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccc
Confidence 378889888763 2358999999999999999999999999999999999876 478999999976
Q ss_pred ----CCcc-------cccceEEEEccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccc
Q 000506 934 ----KNQA-------TFARVSGYCEQNDI--HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-LTNAM 999 (1458)
Q Consensus 934 ----~~~~-------~~~~~~gyv~Q~~~--~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 999 (1458)
.... ..++.++|++|++. ..+.+|+.|++.+..... .. ....+..+.++++++.+++.+ ..++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 3211 12356899999975 446679999987543211 11 111233467889999999963 55554
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceE
Q 000506 1000 VGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1458)
Q Consensus 1000 vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~v 1078 (1458)
+ +.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+.+|++
T Consensus 146 ~-----~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 P-----RAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred c-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 3 479999999999999999999999999999999999999999999998764 899999999986 577789999
Q ss_pred EEEecCcEEEEeCCC
Q 000506 1079 LLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1079 lll~~gG~~~~~G~~ 1093 (1458)
++|++ |++++.|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99985 789988874
No 424
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=318.23 Aligned_cols=201 Identities=24% Similarity=0.418 Sum_probs=169.4
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCCHHHHHH
Q 000506 188 DVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMTVRETMD 266 (1458)
Q Consensus 188 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 266 (1458)
|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999987 9999999998764322 357999999999999999999998
Q ss_pred HhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCCChHH
Q 000506 267 FSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGVSGGQ 346 (1458)
Q Consensus 267 f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGLSGGq 346 (1458)
+.... .... . .. ....++.+++.+||++..|+.+.. |||||
T Consensus 94 ~~~~~-~~~~--~--~~-----------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLKL--N--AA-----------------------------QREKLHAIARQMGIEDLLARLPGQ-----LSGGQ 134 (232)
T ss_pred ccccc-ccCC--C--HH-----------------------------HHHHHHHHHHHcCcHHHHhCCccc-----CCHHH
Confidence 75321 0000 0 00 011245578899999888888876 99999
Q ss_pred HHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEEEEcC
Q 000506 347 KKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIVYQGP 426 (1458)
Q Consensus 347 kkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~~G~ 426 (1458)
||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+..+ ++++.++|+.+++.+++|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQ-LTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999999876434 455667788889999999999999999999999
Q ss_pred hhhHH
Q 000506 427 REKVL 431 (1458)
Q Consensus 427 ~~~~~ 431 (1458)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88764
No 425
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.1e-33 Score=321.82 Aligned_cols=198 Identities=25% Similarity=0.378 Sum_probs=169.5
Q ss_pred ecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc---ccccceEEEEccCCCCCCCCCHH
Q 000506 883 LLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ---ATFARVSGYCEQNDIHSPHVTVY 959 (1458)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTV~ 959 (1458)
+|+|+|+++++||+++|+|+||||||||+++|+|..+ .+|+|.++|.+... ...++.++|++|++.+++.+||+
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999874 38999999987643 22345689999998888889999
Q ss_pred HHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCEEEEe
Q 000506 960 ESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVA-------NPSIIFMD 1032 (1458)
Q Consensus 960 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~-------~p~illLD 1032 (1458)
||+.+.... ....++..+.++++++.++|.+..++.+ ..||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 1122333557889999999987777654 4799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1033 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1033 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
|||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+..
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 218 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRRD 218 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999877999999999986 57889999999985 7899988753
No 426
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=326.39 Aligned_cols=208 Identities=26% Similarity=0.347 Sum_probs=169.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCC-CCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDL-HFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 258 (1458)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+...+|+|.++|+++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 35999999999999999999999999999999999999886212399999999886432 2457999999974 5677
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
.||+||+.|..+..+.. +.+ ....++.+++.+||++..++.+.+
T Consensus 100 ~tv~enl~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~L~~~~~~~~~~-- 143 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP----------RPE------------------------MIKIVRDVLADVGMLDYIDSEPAN-- 143 (282)
T ss_pred CCHHHHHHhhHHhCCCC----------HHH------------------------HHHHHHHHHHHCCChhHhcCCccc--
Confidence 89999998754322110 000 011245578899999888888766
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+. +|+.++|+.+++ ..+|++++|++
T Consensus 144 ---LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~-tvli~tH~~~~~-~~~d~i~~l~~ 218 (282)
T PRK13640 144 ---LSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNL-TVISITHDIDEA-NMADQVLVLDD 218 (282)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCC-EEEEEecCHHHH-HhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998764344 455556666777 57999999999
Q ss_pred CeEEEEcChhhHH
Q 000506 419 GQIVYQGPREKVL 431 (1458)
Q Consensus 419 G~iv~~G~~~~~~ 431 (1458)
|++++.|+++++.
T Consensus 219 G~i~~~g~~~~~~ 231 (282)
T PRK13640 219 GKLLAQGSPVEIF 231 (282)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998874
No 427
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=320.75 Aligned_cols=208 Identities=24% Similarity=0.311 Sum_probs=167.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD--DDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|++|++||+++|+|||||||||||++|+|+++ |....+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 469999999999999999999999999999999999986 3111389999999987532 124679999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 331 (1458)
++.+||+||+.+..+..+.... . +. ...++.+++.+||.. ..+
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~~---------~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~ 143 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVNR---------S----------EA--------------DEIVESSLKRVALWDEVKDRLK 143 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCCH---------H----------HH--------------HHHHHHHHHHcCCchhhhHHhh
Confidence 9999999999875432110000 0 00 012345677888753 334
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ |||||||||+||++|+.+|++++|||||+|||+.++.++.+.|+++++ + ++|+.++|+.+++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d 215 (252)
T PRK14256 144 SNAME-----LSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSD 215 (252)
T ss_pred CCcCc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCC
Confidence 44444 999999999999999999999999999999999999999999999964 4 456667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|+++..|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 216 YTAFFYMGDLVECGETKKIF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988763
No 428
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=5.8e-34 Score=318.93 Aligned_cols=209 Identities=27% Similarity=0.419 Sum_probs=169.1
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.+.. ..+.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhH
Confidence 677888876531 12459999999999999999999999999999999999876 47899999998753
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccc------CCCCC
Q 000506 936 Q---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVG------LPGVD 1006 (1458)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~~~~~ 1006 (1458)
. ...++.++|++|++..++ .||.|++.+... ... .+.++++++.+++.+..+.... .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 234567999999998776 699999976421 111 2345678888888776665431 11245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|++. . .+.+|++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~-~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS-L-LDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH-H-HHhCCEEEEEeC-Ce
Confidence 89999999999999999999999999999999999999999999998764 89999999986 3 479999999986 67
Q ss_pred EEEeC
Q 000506 1087 VIYAG 1091 (1458)
Q Consensus 1087 ~~~~G 1091 (1458)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 77654
No 429
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=322.80 Aligned_cols=208 Identities=24% Similarity=0.345 Sum_probs=166.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDL--KLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|.- ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (258)
T PRK14241 17 FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNP 96 (258)
T ss_pred EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEcccccc
Confidence 469999999999999999999999999999999999986410 1389999999987421 124579999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc----cccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD----ICAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 331 (1458)
++.+||+||+.++....+... +. + ....++.+++.+||. +..+
T Consensus 97 ~~~~tv~~nl~~~~~~~~~~~---------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~ 143 (258)
T PRK14241 97 FPTMSIRDNVVAGLKLNGVRN---------KK----------D--------------LDELVEKSLRGANLWNEVKDRLD 143 (258)
T ss_pred CCCCcHHHHHHHHHHhcCCCC---------HH----------H--------------HHHHHHHHHHHcCCchhhhhHhh
Confidence 999999999987654221100 00 0 011234567788874 3445
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + ++++.++|+.+++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d 215 (258)
T PRK14241 144 KPGGG-----LSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSD 215 (258)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCC
Confidence 55555 999999999999999999999999999999999999999999999853 4 456667788889999999
Q ss_pred EEEEEc------CCeEEEEcChhhHH
Q 000506 412 NIILLS------EGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~------~G~iv~~G~~~~~~ 431 (1458)
+|++|+ +|++++.|+++++.
T Consensus 216 ~i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 216 QTAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEEEecccCCCCceEEecCCHHHHH
Confidence 999996 79999999988764
No 430
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-33 Score=318.75 Aligned_cols=230 Identities=20% Similarity=0.275 Sum_probs=181.1
Q ss_pred eEEEEeeeeeEeecc----hhhhh--ccc-ccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeE
Q 000506 854 LSLAFHHVNYSVDMP----AEMKA--QGI-EEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGD 926 (1458)
Q Consensus 854 ~~l~~~~l~~~~~~~----~~~~~--~~~-~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~ 926 (1458)
+++.++|+...++.. ..++. .+. ....+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~ 80 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGK 80 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceE
Confidence 457778876655431 11221 111 1234679999999999999999999999999999999999876 47899
Q ss_pred EEECCeeCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000506 927 ISISGYPKNQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 927 i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
|.++|. +++++|+....+.+||.|++.+..... ..+.++..+.++++++.+++.+..+..+ +
T Consensus 81 I~~~g~----------~~~~~~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (264)
T PRK13546 81 VDRNGE----------VSVIAISAGLSGQLTGIENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQPV-----K 142 (264)
T ss_pred EEECCE----------EeEEecccCCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCc-----c
Confidence 999995 356777777778899999998764332 2234444556788899999988777654 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.+...+++.|+++++.|+|||+++|++. ++.+.+|++++|++ |+
T Consensus 143 ~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~ 220 (264)
T PRK13546 143 KYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GK 220 (264)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999877999999999975 57788999999985 78
Q ss_pred EEEeCCCCcchHHHHHHHH
Q 000506 1087 VIYAGPLGRQSQKLVEYFE 1105 (1458)
Q Consensus 1087 ~~~~G~~~~~~~~~~~~f~ 1105 (1458)
++..|+.....+...+||.
T Consensus 221 i~~~g~~~~~~~~~~~~~~ 239 (264)
T PRK13546 221 LKDYGELDDVLPKYEAFLN 239 (264)
T ss_pred EEEeCCHHHHHHHhHHHHH
Confidence 9888886432233333443
No 431
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.5e-34 Score=364.43 Aligned_cols=211 Identities=28% Similarity=0.449 Sum_probs=177.8
Q ss_pred eEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCee
Q 000506 854 LSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYP 933 (1458)
Q Consensus 854 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1458)
..++|+|++|.++. ++++|+|+|++++|||.+||+||||||||||++.|.|..+ +.+|+|.+||++
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCEe
Confidence 35999999999852 3579999999999999999999999999999999999887 479999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcC-------CCccccccccCC
Q 000506 934 KNQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVE-------LEPLTNAMVGLP 1003 (1458)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-------L~~~~~~~vg~~ 1003 (1458)
+.. ..+++.++||+|++.++. -||+||+.++.. +.++++ ++++++..+ +.+..|+.+|.
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~-----~at~ee----i~~a~k~a~~~d~I~~lp~g~dt~vge- 461 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRP-----DATDEE----IEEALKLANAHEFIANLPDGYDTIVGE- 461 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCC-----CCCHHH----HHHHHHHhChHHHHHhCcccccceecC-
Confidence 654 567889999999999987 899999998631 223332 344444333 23357899984
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEec
Q 000506 1004 GVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1083 (1458)
Q Consensus 1004 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~ 1083 (1458)
+...||||||||++||||+++||+||+||||||+||+.+...|++.++++. +++|+|+++|+++ ....+|++++|++
T Consensus 462 ~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~ 538 (567)
T COG1132 462 RGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN 538 (567)
T ss_pred CCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC
Confidence 445799999999999999999999999999999999999999999999876 6789999999986 3455999999986
Q ss_pred CcEEEEeCCC
Q 000506 1084 GGQVIYAGPL 1093 (1458)
Q Consensus 1084 gG~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 789999985
No 432
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=322.34 Aligned_cols=207 Identities=23% Similarity=0.349 Sum_probs=164.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD--DDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|++|++||+++|+|||||||||||++|+|.++ |+...+|+|.++|+++... ..++.++|++|++.+
T Consensus 25 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 104 (259)
T PRK14274 25 HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNP 104 (259)
T ss_pred eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCcc
Confidence 459999999999999999999999999999999999986 3212389999999987531 124579999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 331 (1458)
++. ||+||+.|..+..+.... .+ . ...++.+++.+||.+ ..+
T Consensus 105 ~~~-tv~enl~~~~~~~~~~~~---------~~----------~--------------~~~~~~~l~~~~l~~~~~~~l~ 150 (259)
T PRK14274 105 FPQ-SIFDNVAYGPRIHGTKNK---------KK----------L--------------QEIVEKSLKDVALWDEVKDRLH 150 (259)
T ss_pred ccc-CHHHHHHhHHHhcCCCCH---------HH----------H--------------HHHHHHHHHHcCCchhhhhhhh
Confidence 875 999999876432211000 00 0 011334677777753 234
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ ||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + .+++.++|+.+++.+++|
T Consensus 151 ~~~~~-----LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d 222 (259)
T PRK14274 151 TQALS-----LSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE--K-YTIVIVTHNMQQAARVSD 222 (259)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEEcCHHHHHHhCC
Confidence 44444 999999999999999999999999999999999999999999999853 4 455666777889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|+++.+|+++++.
T Consensus 223 ~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 223 QTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred EEEEEECCEEEEECCHHHHh
Confidence 99999999999999998864
No 433
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-33 Score=316.97 Aligned_cols=204 Identities=29% Similarity=0.451 Sum_probs=172.2
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc-ccceEEEecCCCCCCCCCCHHH
Q 000506 185 ILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV-PQRTCAYISQNDLHFGEMTVRE 263 (1458)
Q Consensus 185 iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 263 (1458)
+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 899999999999999999999999999999999999998 999999999876532 2457999999999999999999
Q ss_pred HHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCCC
Q 000506 264 TMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGVS 343 (1458)
Q Consensus 264 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGLS 343 (1458)
|+.+.....+... .+. ...+..+++.+||.+..++.+.+ ||
T Consensus 91 ~l~~~~~~~~~~~--------------------~~~--------------~~~~~~~l~~~~l~~~~~~~~~~-----LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK--------------------KEI--------------ERKVLEIAEMLGIDHLLNRKPET-----LS 131 (235)
T ss_pred HHHHHHHHcCCCH--------------------HHH--------------HHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 9987643221100 000 01234478889998888888876 99
Q ss_pred hHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEEE
Q 000506 344 GGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIVY 423 (1458)
Q Consensus 344 GGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~ 423 (1458)
|||||||+||+|++.+|++++|||||+|||+.++.++.+.|++++...+. +++.++|+.+++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~-tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGV-TVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCC-EEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998764344 55556677888999999999999999999
Q ss_pred EcChhhHH
Q 000506 424 QGPREKVL 431 (1458)
Q Consensus 424 ~G~~~~~~ 431 (1458)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987764
No 434
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1e-33 Score=313.62 Aligned_cols=197 Identities=27% Similarity=0.359 Sum_probs=165.9
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 67888887663 2458999999999999999999999999999999999876 47899999998753
Q ss_pred cccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000506 936 QATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKR 1015 (1458)
Q Consensus 936 ~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1015 (1458)
....++.++|++|++.+++..||+|++.+....+. .. .+.++++++.+||.+..+..+ +.||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22256679999999988889999999987543321 11 234789999999987666654 4799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1016 l~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++. . |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~-~-~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLP-G-ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhc-c-CcEEeec
Confidence 99999999999999999999999999999999999998878999999999975 344 3 8887774
No 435
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=320.02 Aligned_cols=208 Identities=21% Similarity=0.302 Sum_probs=165.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 259 (1458)
+.+|+|+|+++++||+++|+||||||||||+++|+|+++|....+|+|.++|+++.... .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 46999999999999999999999999999999999997531122899999999886532 2457999999998887 6
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccccccc
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CADTMVG 335 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt~vg 335 (1458)
||+||+.++.+.++..... .. .....+.+++.+||.. ..+..+
T Consensus 94 tv~eni~~~~~~~~~~~~~------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~~~- 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIKNK------------------DE--------------EEALVVDCLQKVGLFEEVKDKLKQNA- 140 (246)
T ss_pred cHHHHhhhHHhhcCcccCh------------------HH--------------HHHHHHHHHHHcCCChhhhHHhcCCc-
Confidence 9999998864332110000 00 0112345788888843 234443
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++++.++|+.+++.+++|++++
T Consensus 141 ----~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~i~~ 213 (246)
T PRK14269 141 ----LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH--N-LSMIMVTHNMQQGKRVADYTAF 213 (246)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEecCHHHHHhhCcEEEE
Confidence 44999999999999999999999999999999999999999999999853 4 4566677888899999999999
Q ss_pred EcCCeEEEEcChhhHH
Q 000506 416 LSEGQIVYQGPREKVL 431 (1458)
Q Consensus 416 L~~G~iv~~G~~~~~~ 431 (1458)
|++|++++.|+.+++.
T Consensus 214 l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 214 FHLGELIEFGESKEFF 229 (246)
T ss_pred EECCEEEEECCHHHHH
Confidence 9999999999988764
No 436
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-33 Score=313.83 Aligned_cols=197 Identities=28% Similarity=0.421 Sum_probs=163.8
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-------cccceEEEecCCC
Q 000506 181 RKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-------VPQRTCAYISQND 253 (1458)
Q Consensus 181 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d 253 (1458)
+++.+ |+|+++++ |+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++
T Consensus 11 ~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~ 84 (214)
T cd03297 11 PDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQY 84 (214)
T ss_pred CCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCC
Confidence 34445 99999999 999999999999999999999999987 99999999886431 1245799999999
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTM 333 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 333 (1458)
.+++.+||+||+.+..... .. . . ....++.+++.+||++..++.
T Consensus 85 ~~~~~~t~~~~l~~~~~~~---~~-----~---~-------------------------~~~~~~~~l~~~~l~~~~~~~ 128 (214)
T cd03297 85 ALFPHLNVRENLAFGLKRK---RN-----R---E-------------------------DRISVDELLDLLGLDHLLNRY 128 (214)
T ss_pred ccCCCCCHHHHHHHHHhhC---CH-----H---H-------------------------HHHHHHHHHHHcCCHhHhhcC
Confidence 9999999999998753211 00 0 0 011234578899998877777
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEE
Q 000506 334 VGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNI 413 (1458)
Q Consensus 334 vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v 413 (1458)
+++ ||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ ++++.++|+.+++.+++|++
T Consensus 129 ~~~-----LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i 202 (214)
T cd03297 129 PAQ-----LSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLN-IPVIFVTHDLSEAEYLADRI 202 (214)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-cEEEEEecCHHHHHHhcCEE
Confidence 766 999999999999999999999999999999999999999999999976434 45666778888999999999
Q ss_pred EEEcCCeEEEEc
Q 000506 414 ILLSEGQIVYQG 425 (1458)
Q Consensus 414 ~lL~~G~iv~~G 425 (1458)
++|++|+++.+|
T Consensus 203 ~~l~~G~i~~~g 214 (214)
T cd03297 203 VVMEDGRLQYIG 214 (214)
T ss_pred EEEECCEEEecC
Confidence 999999998765
No 437
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=321.32 Aligned_cols=215 Identities=22% Similarity=0.269 Sum_probs=175.1
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 16 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g 82 (265)
T PRK14252 16 KSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHP 82 (265)
T ss_pred eEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcC
Confidence 588999998773 246999999999999999999999999999999999986531 2689999999
Q ss_pred eeCC-------cccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccc
Q 000506 932 YPKN-------QATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMV 1000 (1458)
Q Consensus 932 ~~~~-------~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~v 1000 (1458)
.+.. ...+++.++|++|++.+++. ||+||+.+...... .. .....++.++++++.+++.+ ..+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~-~~-~~~~~~~~~~~~l~~~~l~~~l~~~~~~~- 158 (265)
T PRK14252 83 DNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG-VK-RRSILEERVENALRNAALWDEVKDRLGDL- 158 (265)
T ss_pred ccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC-CC-hHHHHHHHHHHHHHHcCCchhhhHHHhCC-
Confidence 7642 12345679999999988886 99999987643221 11 11222456788888888742 22333
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEE
Q 000506 1001 GLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 1080 (1458)
Q Consensus 1001 g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vll 1080 (1458)
...||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++
T Consensus 159 ----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~~ 232 (265)
T PRK14252 159 ----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTAY 232 (265)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEEE
Confidence 347999999999999999999999999999999999999999999999865 699999999986 57789999999
Q ss_pred EecCcEEEEeCCC
Q 000506 1081 MKRGGQVIYAGPL 1093 (1458)
Q Consensus 1081 l~~gG~~~~~G~~ 1093 (1458)
|++ |+++..|+.
T Consensus 233 l~~-G~i~~~g~~ 244 (265)
T PRK14252 233 MYM-GELIEFGAT 244 (265)
T ss_pred EEC-CEEEEeCCH
Confidence 985 788888875
No 438
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=319.98 Aligned_cols=219 Identities=22% Similarity=0.301 Sum_probs=176.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC---CceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1458)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|.... .+.+|+|.+||
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 467888887763 24599999999999999999999999999999999997531 13689999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1458)
.+... ...++.++|++|++.+++. |+.||+.+...... ....+..++++.++++.+++.+....... ....
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLD-KSAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcc
Confidence 87642 2345679999999988875 99999987643221 11223345678889999988542211111 2245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999854 899999999986 68888999999985 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 9998875
No 439
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=320.76 Aligned_cols=206 Identities=22% Similarity=0.302 Sum_probs=165.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcC---CCCCCCcccEEEECCeecCCc-----cccceEEEecCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGK---LDDDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDL 254 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~---~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~ 254 (1458)
+++|+|+|+++++||+++|+||||||||||+++|+|. .++. ..+|+|.++|+++... ..++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 4699999999999999999999999999999999997 3331 1389999999987542 12456999999988
Q ss_pred CCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----cc
Q 000506 255 HFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CA 330 (1458)
Q Consensus 255 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~ 330 (1458)
+++ .||+||+.++.+..+.... + . ....++.+++.+||.+ ..
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~~-----~--------------~--------------~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKDN-----A--------------F--------------IRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCcH-----H--------------H--------------HHHHHHHHHHHcCCCcchhhhh
Confidence 887 5999999876443211000 0 0 0012345778888854 23
Q ss_pred cccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhcc
Q 000506 331 DTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLF 410 (1458)
Q Consensus 331 dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~ 410 (1458)
+..+.+ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++
T Consensus 141 ~~~~~~-----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~ 212 (250)
T PRK14245 141 KESAFA-----LSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK--D-YTIVIVTHNMQQAARVS 212 (250)
T ss_pred hCCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHhhC
Confidence 444444 999999999999999999999999999999999999999999999853 4 45666778888999999
Q ss_pred CEEEEEcCCeEEEEcChhhHH
Q 000506 411 DNIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 411 D~v~lL~~G~iv~~G~~~~~~ 431 (1458)
|++++|++|++++.|+++++.
T Consensus 213 d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 213 DKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred CEEEEEECCEEEEECCHHHHh
Confidence 999999999999999998874
No 440
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1e-33 Score=324.82 Aligned_cols=211 Identities=20% Similarity=0.292 Sum_probs=173.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++. +...+|+|||++|++||+++|+|+||||||||+++|+|... .+|+|.++|.+.
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 3788999988741 12458999999999999999999999999999999999875 479999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccC------CCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGL------PGV 1005 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~------~~~ 1005 (1458)
.. ..+++.++||+|++.+++ .||+||+.... ... .+.+.+.++.+||.+..+..++. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 345678999999999887 49999995321 111 23467788899998765554321 133
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
..||||||||++|||||+.+|+||+|||||+|||+.+...+++.|+++. .++|||+++|++. .+ ..||++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999874 4899999999985 34 45999999985 7
Q ss_pred EEEEeCCCC
Q 000506 1086 QVIYAGPLG 1094 (1458)
Q Consensus 1086 ~~~~~G~~~ 1094 (1458)
++++.|++.
T Consensus 213 ~i~~~g~~~ 221 (275)
T cd03289 213 KVRQYDSIQ 221 (275)
T ss_pred eEeecCCHH
Confidence 899999863
No 441
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.5e-33 Score=317.12 Aligned_cols=206 Identities=28% Similarity=0.429 Sum_probs=172.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-cceEEEecCCCCCCCCCCH
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-QRTCAYISQNDLHFGEMTV 261 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 261 (1458)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 46999999999999999999999999999999999999987 9999999998764332 4579999999999999999
Q ss_pred HHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCC
Q 000506 262 RETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRG 341 (1458)
Q Consensus 262 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 341 (1458)
+||+.+..+..+... .+ .....+.+++.++|....|+.+++
T Consensus 90 ~enl~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHPK----------AK------------------------IKARVEELLELVQLEGLGDRYPNQ----- 130 (237)
T ss_pred HHHHHhHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCHhHhhCChhh-----
Confidence 999987644321100 00 001234578889998777877766
Q ss_pred CChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeE
Q 000506 342 VSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQI 421 (1458)
Q Consensus 342 LSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~i 421 (1458)
||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++++..+ .+++.++|..+++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~-~tvli~sH~~~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVH-VTTVFVTHDQEEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHhhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999865324 4555566777889999999999999999
Q ss_pred EEEcChhhHH
Q 000506 422 VYQGPREKVL 431 (1458)
Q Consensus 422 v~~G~~~~~~ 431 (1458)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999988764
No 442
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.6e-33 Score=311.95 Aligned_cols=199 Identities=24% Similarity=0.327 Sum_probs=166.7
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc-ccceEEEecCCCCCCCCCCHHH
Q 000506 185 ILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV-PQRTCAYISQNDLHFGEMTVRE 263 (1458)
Q Consensus 185 iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 263 (1458)
+++|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999999988 999999999875432 3467999999999999999999
Q ss_pred HHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccCCCCC
Q 000506 264 TMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMRRGVS 343 (1458)
Q Consensus 264 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGLS 343 (1458)
|+.+...... ... . .....++.+++.+||++..++.+.+ ||
T Consensus 90 n~~~~~~~~~-~~~-------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN-------------------A--------------EQQEKVVDAAQQVGIADYLDRLPEQ-----LS 130 (213)
T ss_pred HHHhHhhccC-Ccc-------------------H--------------HHHHHHHHHHHHcCcHHHhhCCccc-----CC
Confidence 9987432100 000 0 0011234578899998888888776 99
Q ss_pred hHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCCeEEE
Q 000506 344 GGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEGQIVY 423 (1458)
Q Consensus 344 GGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G~iv~ 423 (1458)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.+.. +++++.++|+.+++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSER-QRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 999999999999999999999999999999999999999999987533 4566667788889999999999999999998
Q ss_pred EcC
Q 000506 424 QGP 426 (1458)
Q Consensus 424 ~G~ 426 (1458)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 443
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.2e-33 Score=326.64 Aligned_cols=212 Identities=28% Similarity=0.433 Sum_probs=178.7
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCCCCC
Q 000506 181 RKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDLHFG 257 (1458)
Q Consensus 181 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 257 (1458)
.++++|+|+||.+.+||.++|+||||||||||.++|.|..+|. +|.|.++|-+++..+. .+.|||.||+-.+|+
T Consensus 347 ~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~ 423 (580)
T COG4618 347 QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD 423 (580)
T ss_pred CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC
Confidence 3467999999999999999999999999999999999999997 9999999998876554 378999999999997
Q ss_pred CCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCc
Q 000506 258 EMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQ 337 (1458)
Q Consensus 258 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 337 (1458)
. ||.|||. |+. ++.|-+++++++.+.+ ..|.| +.|++.+||.||+.
T Consensus 424 G-TIaeNIa---Rf~----------------------~~~d~~kIieAA~lAg-----vHelI---l~lP~GYdT~iG~~ 469 (580)
T COG4618 424 G-TIAENIA---RFG----------------------EEADPEKVIEAARLAG-----VHELI---LRLPQGYDTRIGEG 469 (580)
T ss_pred C-cHHHHHH---hcc----------------------ccCCHHHHHHHHHHcC-----hHHHH---HhCcCCccCccCCC
Confidence 7 9999994 221 2233445566665544 23433 46999999999984
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEc
Q 000506 338 MRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLS 417 (1458)
Q Consensus 338 ~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~ 417 (1458)
..+||||||||+++||||+++|.+++||||-++||+.-...+.+.|.+... .|+|+|++.| .+.+...+|+|++|+
T Consensus 470 -G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvviaH--RPs~L~~~Dkilvl~ 545 (580)
T COG4618 470 -GATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVVIAH--RPSALASVDKILVLQ 545 (580)
T ss_pred -CCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEEEec--CHHHHhhcceeeeec
Confidence 566999999999999999999999999999999999999999999999865 4555555444 457889999999999
Q ss_pred CCeEEEEcChhhHHHH
Q 000506 418 EGQIVYQGPREKVLEF 433 (1458)
Q Consensus 418 ~G~iv~~G~~~~~~~~ 433 (1458)
+|++-.+|+++|++..
T Consensus 546 ~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 546 DGRIAAFGPREEVLAK 561 (580)
T ss_pred CChHHhcCCHHHHHHH
Confidence 9999999999999874
No 444
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=319.95 Aligned_cols=214 Identities=22% Similarity=0.322 Sum_probs=174.4
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCcee------eEEE
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTE------GDIS 928 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~------G~i~ 928 (1458)
.+.++|+++++. ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+ |++.
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~--~~G~v~~~G~~~ 74 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEI--YDSKIKVDGKVL 74 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CcCceeEcCEEE
Confidence 378888887763 35699999999999999999999999999999999998753 44 5555
Q ss_pred ECCeeCC---cccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccc
Q 000506 929 ISGYPKN---QATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP----LTNAMVG 1001 (1458)
Q Consensus 929 i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg 1001 (1458)
++|.+.. ....++.++|++|++.+++.+||+||+.+...... ....++..+.++++++.+++.+ ..+..
T Consensus 75 ~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-- 150 (257)
T PRK14246 75 YFGKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP-- 150 (257)
T ss_pred ECCcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC--
Confidence 5555432 12345779999999999999999999988743221 1123344567889999999964 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEE
Q 000506 1002 LPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1081 (1458)
Q Consensus 1002 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll 1081 (1458)
+..||+|||||++|||+|+.+|++++|||||+|||..+...+.+.|+++.+ ++|||+++|++. .+.+.||++++|
T Consensus 151 ---~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l 225 (257)
T PRK14246 151 ---ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFL 225 (257)
T ss_pred ---cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEE
Confidence 357999999999999999999999999999999999999999999999864 699999999986 577889999999
Q ss_pred ecCcEEEEeCCC
Q 000506 1082 KRGGQVIYAGPL 1093 (1458)
Q Consensus 1082 ~~gG~~~~~G~~ 1093 (1458)
++ |+++..|+.
T Consensus 226 ~~-g~i~~~g~~ 236 (257)
T PRK14246 226 YN-GELVEWGSS 236 (257)
T ss_pred EC-CEEEEECCH
Confidence 85 789888875
No 445
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=327.89 Aligned_cols=205 Identities=20% Similarity=0.323 Sum_probs=167.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCC----c----cccceEEEecCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKE----F----VPQRTCAYISQNDL 254 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~----~----~~~~~~~yv~Q~d~ 254 (1458)
..+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++.
T Consensus 24 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~ 100 (289)
T PRK13645 24 FKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPE 100 (289)
T ss_pred cceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcc
Confidence 35999999999999999999999999999999999999987 9999999998642 1 12457999999973
Q ss_pred --CCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc-cccc
Q 000506 255 --HFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD-ICAD 331 (1458)
Q Consensus 255 --~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~d 331 (1458)
++ ..||+||+.|.....+.. . .+ ....++.+++.+||+ +..+
T Consensus 101 ~~~~-~~tv~enl~~~~~~~~~~--~--------~~------------------------~~~~~~~ll~~~~L~~~~~~ 145 (289)
T PRK13645 101 YQLF-QETIEKDIAFGPVNLGEN--K--------QE------------------------AYKKVPELLKLVQLPEDYVK 145 (289)
T ss_pred hhhh-hhHHHHHHHHHHHHcCCC--H--------HH------------------------HHHHHHHHHHHcCCChhHhc
Confidence 34 459999998854321110 0 00 001234577889994 5677
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+.+++.+++|
T Consensus 146 ~~~~~-----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiiiisH~~~~~~~~~d 219 (289)
T PRK13645 146 RSPFE-----LSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYK-KRIIMVTHNMDQVLRIAD 219 (289)
T ss_pred CChhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCC
Confidence 77766 999999999999999999999999999999999999999999999876434 456667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|++++.|+.+++.
T Consensus 220 ~i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 220 EVIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988764
No 446
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=320.19 Aligned_cols=207 Identities=23% Similarity=0.338 Sum_probs=164.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD--DDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.+
T Consensus 18 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 97 (252)
T PRK14239 18 KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNP 97 (252)
T ss_pred eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCcc
Confidence 459999999999999999999999999999999999853 4222389999999987431 124579999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 331 (1458)
++ +||+||+.+.....+.... + .. ...++.+++.+|+.. ..+
T Consensus 98 ~~-~tv~enl~~~~~~~~~~~~-~------------------~~--------------~~~~~~~l~~~~l~~~~~~~~~ 143 (252)
T PRK14239 98 FP-MSIYENVVYGLRLKGIKDK-Q------------------VL--------------DEAVEKSLKGASIWDEVKDRLH 143 (252)
T ss_pred Cc-CcHHHHHHHHHHHcCCCcH-H------------------HH--------------HHHHHHHHHHcCCchhHHHHHh
Confidence 87 7999999886432211000 0 00 011234567777642 334
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
..+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+.+++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d 215 (252)
T PRK14239 144 DSALG-----LSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISD 215 (252)
T ss_pred cCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCC
Confidence 44544 999999999999999999999999999999999999999999999854 4 456667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
+|++|++|++++.|+.+++.
T Consensus 216 ~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 216 RTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988864
No 447
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=9e-34 Score=362.37 Aligned_cols=212 Identities=24% Similarity=0.364 Sum_probs=178.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++|.++. +.+.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+.
T Consensus 341 ~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~~i 407 (582)
T PRK11176 341 DIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGHDL 407 (582)
T ss_pred eEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCEEh
Confidence 6999999998842 12469999999999999999999999999999999999987 4789999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-------LTNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 1004 (1458)
++ ..+++.++||||++.+++ -|++||+.++. +.+.+ ++.++++++..++.+ -.|+.+|..+
T Consensus 408 ~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g 478 (582)
T PRK11176 408 RDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGENG 478 (582)
T ss_pred hhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCCC
Confidence 53 456788999999999886 69999998742 11122 234666777776543 3577787544
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.||+|++|++
T Consensus 479 -~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~- 553 (582)
T PRK11176 479 -VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED- 553 (582)
T ss_pred -CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC-
Confidence 5799999999999999999999999999999999999999999999874 4799999999985 6678999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|+++..|+.
T Consensus 554 g~i~e~g~~ 562 (582)
T PRK11176 554 GEIVERGTH 562 (582)
T ss_pred CEEEEeCCH
Confidence 799999984
No 448
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.8e-33 Score=320.83 Aligned_cols=207 Identities=23% Similarity=0.340 Sum_probs=168.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCee-----cCCccc-------cceEEEec
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHE-----FKEFVP-------QRTCAYIS 250 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~-----~~~~~~-------~~~~~yv~ 250 (1458)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|++ +..... ++.++|++
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 46999999999999999999999999999999999999987 9999999987 554321 34699999
Q ss_pred CCCC--CCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc
Q 000506 251 QNDL--HFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI 328 (1458)
Q Consensus 251 Q~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~ 328 (1458)
|++. +++.+|+.||+.+.....+... . ++ ....++.+++.+|+.+
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~~~-~------------------~~--------------~~~~~~~~l~~~~l~~ 142 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGARH-Y------------------GD--------------IRATAGDWLERVEIDA 142 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhccCc-H------------------HH--------------HHHHHHHHHHHcCCCh
Confidence 9973 6777899999976422110000 0 00 0112345788899974
Q ss_pred -cccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHH
Q 000506 329 -CADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAY 407 (1458)
Q Consensus 329 -~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~ 407 (1458)
..++.+++ |||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.+.. +.+|+.++|+.+++.
T Consensus 143 ~~~~~~~~~-----LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~isH~~~~~~ 216 (258)
T PRK11701 143 ARIDDLPTT-----FSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVREL-GLAVVIVTHDLAVAR 216 (258)
T ss_pred hHHhCCCcc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHH
Confidence 56777766 99999999999999999999999999999999999999999999987643 456667788889999
Q ss_pred hccCEEEEEcCCeEEEEcChhhHH
Q 000506 408 DLFDNIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 408 ~~~D~v~lL~~G~iv~~G~~~~~~ 431 (1458)
+.+|+|++|++|++++.|+++++.
T Consensus 217 ~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 217 LLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999988763
No 449
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-34 Score=322.56 Aligned_cols=209 Identities=26% Similarity=0.363 Sum_probs=165.1
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhh
Confidence 46777776631 11358999999999999999999999999999999999976 478999999987532
Q ss_pred ---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHH-----HHHHHHHHHHc--CCCccccccccCCCCC
Q 000506 937 ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTR-----KMFVDEVMDLV--ELEPLTNAMVGLPGVD 1006 (1458)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~-----~~~v~~~l~~l--~L~~~~~~~vg~~~~~ 1006 (1458)
...++.++|++|++.+++ .||+||+.+.... ...... ...+++.++.+ ++.+..+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 234567999999988776 6999999875321 111111 11234455554 455444433 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++. +|+|||+++|++. ++ +.||++++|++ |+
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~ 213 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GK 213 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-Ce
Confidence 799999999999999999999999999999999999999999999986 4899999999986 45 45999999986 68
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
+++.|+.
T Consensus 214 i~~~~~~ 220 (234)
T cd03251 214 IVERGTH 220 (234)
T ss_pred EeeeCCH
Confidence 8888764
No 450
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=5.4e-34 Score=323.05 Aligned_cols=210 Identities=27% Similarity=0.403 Sum_probs=162.5
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.+.. .+++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~~----------~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPS----------RPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCC----------CCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhh
Confidence 46777766531 012458999999999999999999999999999999999876 478999999987532
Q ss_pred ---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccc-------ccccCCCCC
Q 000506 937 ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTN-------AMVGLPGVD 1006 (1458)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-------~~vg~~~~~ 1006 (1458)
...++.++|++|++.+++ .||+|++.+....+ ..+ ..++.++..++.+..+ +... ..+.
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 138 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGS 138 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeec-cCCc
Confidence 233467999999988776 69999998743211 111 1223333333322211 1111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|++. ++ +.||++++|++ |+
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~ 214 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQ 214 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999987 7999999999986 34 48999999986 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
+++.|+.
T Consensus 215 i~~~~~~ 221 (238)
T cd03249 215 VVEQGTH 221 (238)
T ss_pred EEEeCCH
Confidence 9888874
No 451
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-33 Score=321.26 Aligned_cols=207 Identities=21% Similarity=0.301 Sum_probs=165.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD--DDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
.++|+|+|++|++||+++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.+
T Consensus 26 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 105 (260)
T PRK10744 26 FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTP 105 (260)
T ss_pred eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCcc
Confidence 359999999999999999999999999999999999986 2112389999999987421 124579999999888
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc----cccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD----ICAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 331 (1458)
++ .||+||+.+......... .. + ....++.+++.+||. +..+
T Consensus 106 ~~-~tv~~nl~~~~~~~~~~~---------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~ 151 (260)
T PRK10744 106 FP-MSIYDNIAFGVRLFEKLS---------RA----------E--------------MDERVEWALTKAALWNEVKDKLH 151 (260)
T ss_pred Cc-CcHHHHHhhhHhhcCCCC---------HH----------H--------------HHHHHHHHHHHcCCChhhHHHHh
Confidence 87 799999987643211000 00 0 001234567788874 3345
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
..+++ ||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|
T Consensus 152 ~~~~~-----LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiii~sH~~~~~~~~~d 223 (260)
T PRK10744 152 QSGYS-----LSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ--D-YTVVIVTHNMQQAARCSD 223 (260)
T ss_pred cCCCC-----CCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCC
Confidence 55544 999999999999999999999999999999999999999999999853 4 456667788888999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|+++..|+.+++.
T Consensus 224 ~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 224 YTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 452
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.5e-33 Score=364.06 Aligned_cols=205 Identities=25% Similarity=0.398 Sum_probs=166.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 259 (1458)
+++|+|+|++|+|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++... ++.++||+|++.+|+.
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~g- 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSG- 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCcc-
Confidence 46999999999999999999999999999999999999998 9999999999987653 5789999999999976
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
|++|||.++.. . +++++...++.+.+. + .+ -.|++..||.+|+. .
T Consensus 542 TI~eNi~~~~~---~--------------------~~e~i~~al~~a~l~--------~-~i--~~lp~G~dt~ige~-G 586 (686)
T TIGR03797 542 SIFENIAGGAP---L--------------------TLDEAWEAARMAGLA--------E-DI--RAMPMGMHTVISEG-G 586 (686)
T ss_pred cHHHHHhcCCC---C--------------------CHHHHHHHHHHcCcH--------H-HH--HhccccccccccCC-C
Confidence 99999987421 0 011222222222111 1 11 13677889999874 4
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
..||||||||++|||||+++|++|+||||||+||+.+..++.+.|+++ ++|+|++. |.. +..+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~IiIt-Hr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIVIA-HRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEEEe-cCh-HHHHcCCEEEEEECC
Confidence 669999999999999999999999999999999999999999999875 34555544 444 455779999999999
Q ss_pred eEEEEcChhhHHH
Q 000506 420 QIVYQGPREKVLE 432 (1458)
Q Consensus 420 ~iv~~G~~~~~~~ 432 (1458)
+++++|+++++.+
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998864
No 453
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-33 Score=324.95 Aligned_cols=221 Identities=23% Similarity=0.305 Sum_probs=175.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCC---CceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1458)
.+.++|+++.+. .+.+|+++|++|++||+++|+|+|||||||||++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 588999988763 24599999999999999999999999999999999998642 14689999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCC---------CCC-HHHHHHHHHHHHHHcCCCccc
Q 000506 932 YPKNQ-----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSS---------DID-SKTRKMFVDEVMDLVELEPLT 996 (1458)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~---------~~~-~~~~~~~v~~~l~~l~L~~~~ 996 (1458)
.+... ...++.++|++|++.+++ .||+||+.+....+... ... .+...+.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87642 134567999999988777 59999999865322100 011 122345688899999885322
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhc
Q 000506 997 NAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1076 (1458)
Q Consensus 997 ~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D 1076 (1458)
+.... ..+..||||||||++||+||+.+|+||||||||+|||+.++..+++.|+++++ +.|||+++|+++ .+.+.+|
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 11111 12458999999999999999999999999999999999999999999999976 489999999986 5778899
Q ss_pred eEE-EEecCcEEEEeCCC
Q 000506 1077 ELL-LMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1077 ~vl-ll~~gG~~~~~G~~ 1093 (1458)
+++ +|+ .|++++.|+.
T Consensus 268 ~i~~~l~-~G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLT-GGELVEYDDT 284 (305)
T ss_pred EEEEEec-CCEEEEeCCH
Confidence 975 566 4799999885
No 454
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-34 Score=320.34 Aligned_cols=211 Identities=26% Similarity=0.403 Sum_probs=166.5
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYDE------------KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecCC------------CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeH
Confidence 4678888877631 2358999999999999999999999999999999999876 4789999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccc-c-----CCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMV-G-----LPGV 1005 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v-g-----~~~~ 1005 (1458)
.. ..+++.++|++|++.+++. ||+|++.+... ... ...+++.++.+++.+..+... | ...+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NAT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 32 2345679999999887775 99999976421 111 122344455555543332211 0 1124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||++||++. ++ +.+|++++|++ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 6899999999999999999999999999999999999999999999986 5899999999986 34 56999999985 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 88888764
No 455
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.2e-33 Score=318.61 Aligned_cols=207 Identities=22% Similarity=0.255 Sum_probs=167.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcccEEEECCeecCCccc-cceEEEecCCCC--CCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDL-KLTGKIKYCGHEFKEFVP-QRTCAYISQNDL--HFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~-~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~ 258 (1458)
+++|+|+|+++++||+++|+||||||||||+++|+|+++|.. ..+|+|.++|++++.... ++.++||+|++. +.+.
T Consensus 16 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~ 95 (254)
T PRK10418 16 QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPL 95 (254)
T ss_pred cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCcc
Confidence 358999999999999999999999999999999999998810 029999999998764322 356999999974 4466
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc---ccccccc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI---CADTMVG 335 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~---~~dt~vg 335 (1458)
+|+.+++.+.++..+.. . ....+..+++.+||.+ ..++.++
T Consensus 96 ~~~~~~~~~~~~~~~~~--~----------------------------------~~~~~~~~l~~~~l~~~~~~~~~~~~ 139 (254)
T PRK10418 96 HTMHTHARETCLALGKP--A----------------------------------DDATLTAALEAVGLENAARVLKLYPF 139 (254)
T ss_pred ccHHHHHHHHHHHcCCC--h----------------------------------HHHHHHHHHHHcCCCChhhhhhcCCc
Confidence 79999886643321110 0 0012345788899976 3566665
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
+ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++
T Consensus 140 ~-----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~til~~sH~~~~~~~~~d~v~~ 213 (254)
T PRK10418 140 E-----MSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKR-ALGMLLVTHDMGVVARLADDVAV 213 (254)
T ss_pred c-----cCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhCCEEEE
Confidence 5 99999999999999999999999999999999999999999999987643 35666677888889999999999
Q ss_pred EcCCeEEEEcChhhHH
Q 000506 416 LSEGQIVYQGPREKVL 431 (1458)
Q Consensus 416 L~~G~iv~~G~~~~~~ 431 (1458)
|++|++++.|+.+++.
T Consensus 214 l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 214 MSHGRIVEQGDVETLF 229 (254)
T ss_pred EECCEEEEecCHHHHh
Confidence 9999999999988764
No 456
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-33 Score=332.54 Aligned_cols=229 Identities=26% Similarity=0.406 Sum_probs=197.0
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
-++.+|++.++. ..++|+|||+++++||++||+|.||||||||+|+|+|..+ +++|+|.+||++.
T Consensus 8 ll~~~~i~K~Fg-------------gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~ 72 (500)
T COG1129 8 LLELRGISKSFG-------------GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPV 72 (500)
T ss_pred eeeeecceEEcC-------------CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEc
Confidence 467888877663 4679999999999999999999999999999999999887 5899999999986
Q ss_pred Ccc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000506 935 NQA----TFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLS 1009 (1458)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1009 (1458)
... ....-|+.|.|+..+.|++||.||+.++...+.+ .-++.+.-.+.+.++|+.+++....++.++ .||
T Consensus 73 ~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~Ls 147 (500)
T COG1129 73 AFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DLS 147 (500)
T ss_pred cCCCHHHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hCC
Confidence 432 2345699999999999999999999887655432 335666777789999999999644777765 799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEE
Q 000506 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY 1089 (1458)
Q Consensus 1010 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~ 1089 (1458)
+||||.|.|||||..+++||+||||||.|+......+.+.++++.++|.+||++||.+. |+++.|||+.||.+ |+++.
T Consensus 148 iaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~ 225 (500)
T COG1129 148 IAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVG 225 (500)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEee
Confidence 99999999999999999999999999999999999999999999999999999999987 89999999999986 78888
Q ss_pred eCCC-Cc-chHHHHHHHH
Q 000506 1090 AGPL-GR-QSQKLVEYFE 1105 (1458)
Q Consensus 1090 ~G~~-~~-~~~~~~~~f~ 1105 (1458)
.++. .+ +.+++++..-
T Consensus 226 ~~~~~~~~~~~~lv~~Mv 243 (500)
T COG1129 226 TRPTAAETSEDELVRLMV 243 (500)
T ss_pred ecccccCCCHHHHHHHhh
Confidence 8883 43 4466766654
No 457
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=3.8e-33 Score=318.17 Aligned_cols=219 Identities=26% Similarity=0.317 Sum_probs=171.5
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 56788887763 24599999999999999999999999999999999998421147899999998753
Q ss_pred cc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHh-hhc--C-CCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000506 936 QA---T-FARVSGYCEQNDIHSPHVTVYESLLFSAW-LRL--S-SDIDSKTRKMFVDEVMDLVELE-PLTNAMVGLPGVD 1006 (1458)
Q Consensus 936 ~~---~-~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~-lr~--~-~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1006 (1458)
.. . .++.++|++|++.+++.+|+.+++.+... ++. . .........+++++.++.+++. +..+..+. +
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVN----V 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCC----C
Confidence 21 1 23469999999988888887776543211 110 0 0111223345678899999985 34444331 3
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-hceEEEEecCc
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLMKRGG 1085 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~-~D~vlll~~gG 1085 (1458)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|++. .+... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999877899999999976 35444 799999975 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 89999875
No 458
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.6e-33 Score=309.96 Aligned_cols=194 Identities=24% Similarity=0.298 Sum_probs=162.0
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (198)
T TIGR01189 2 AARNLACSRG-------------ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAE 66 (198)
T ss_pred EEEEEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEccc
Confidence 4567776652 2469999999999999999999999999999999999876 478999999987532
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 937 --ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
..+++.++|++|++.+++.+||.|++.+....+. . + ++.++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 134 (198)
T TIGR01189 67 QRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQR 134 (198)
T ss_pred chHHhhhheEEeccCcccccCCcHHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHH
Confidence 2345679999999888888999999987643321 1 1 235788999999988777665 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEE
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 1080 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vll 1080 (1458)
|++||++|+.+|++|+|||||+|||+.+...+++.|++++++|.|||+++|++. ++ .+++++.
T Consensus 135 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~--~~~~~~~ 197 (198)
T TIGR01189 135 RLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDL-GL--VEARELR 197 (198)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccc-cc--cceEEee
Confidence 999999999999999999999999999999999999999878999999999975 23 3466653
No 459
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=319.47 Aligned_cols=208 Identities=21% Similarity=0.308 Sum_probs=165.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCeecCCcc-----ccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD--DDLKLTGKIKYCGHEFKEFV-----PQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|++|++||+++|+||||||||||+++|+|..+ |....+|+|.++|+++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999976 21123899999999875321 24579999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccc----cc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDIC----AD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~----~d 331 (1458)
++. ||+||+.+.....+.....+ + ....++.+++.+||.+. .+
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~~~------------------~--------------~~~~~~~~l~~~~l~~~~~~~~~ 144 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKNKK------------------K--------------LDEIVEKSLTSVGLWEELGDRLK 144 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCCHH------------------H--------------HHHHHHHHHHHcCCCchhhhHhh
Confidence 876 99999987643221100000 0 00123457888888652 33
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
..++ .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+.+++.+++|
T Consensus 145 ~~~~-----~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiiisH~~~~~~~~~d 216 (251)
T PRK14244 145 DSAF-----ELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK--N-FTIIVVTHSMKQAKKVSD 216 (251)
T ss_pred cChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHhhcC
Confidence 4444 4999999999999999999999999999999999999999999999853 4 456667778889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
+|++|++|++++.|+++++.
T Consensus 217 ~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 217 RVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999987763
No 460
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-33 Score=304.68 Aligned_cols=170 Identities=30% Similarity=0.447 Sum_probs=150.2
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 4677776653 2469999999999999999999999999999999999876 478999999987542
Q ss_pred -----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000506 937 -----ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTE 1011 (1458)
Q Consensus 937 -----~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1011 (1458)
...++.++|++|++..++..|++|++.+. ||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23457899999999888889999988642 8999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1012 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
||||++||++|+.+|++++|||||+|||+.++..+++.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999999999999999999999999999887 899999999986 566789999999864
No 461
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.3e-33 Score=361.33 Aligned_cols=209 Identities=24% Similarity=0.382 Sum_probs=178.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++|.++. ++.+|+|+|++++|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+.
T Consensus 340 ~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~i 405 (592)
T PRK10790 340 RIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYP--LTEGEIRLDGRPL 405 (592)
T ss_pred eEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEEh
Confidence 5899999998841 2359999999999999999999999999999999999987 4789999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL-------TNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 1004 (1458)
++ ..+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+|+.+. .|+.+|..
T Consensus 406 ~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~- 473 (592)
T PRK10790 406 SSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ- 473 (592)
T ss_pred hhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC-
Confidence 53 4577899999999999875 9999998852 122 2346778888887643 46667653
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
...||||||||++|||||+++|+||+||||||+||+.++..+.+.|+++.+ ++|+|+++|+++ ....||++++|++
T Consensus 474 g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~- 549 (592)
T PRK10790 474 GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR- 549 (592)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC-
Confidence 357999999999999999999999999999999999999999999999854 699999999984 5667999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|+++..|+.
T Consensus 550 G~i~~~G~~ 558 (592)
T PRK10790 550 GQAVEQGTH 558 (592)
T ss_pred CEEEEEcCH
Confidence 899999985
No 462
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-33 Score=317.90 Aligned_cols=207 Identities=24% Similarity=0.360 Sum_probs=164.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDD--DLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|++|++||+++|+|||||||||||++|+|..++ ....+|+|.++|+++... ..++.++|++|++.+
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14240 16 FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNP 95 (250)
T ss_pred ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCcc
Confidence 4599999999999999999999999999999999998753 112389999999987531 124579999999888
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc----cccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD----ICAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 331 (1458)
++ +||+||+.+.....+.... .+. ...++.+++.+++. +..+
T Consensus 96 ~~-~t~~~ni~~~~~~~~~~~~-------------------~~~--------------~~~~~~~l~~~~l~~~l~~~~~ 141 (250)
T PRK14240 96 FP-MSIYDNVAYGPRTHGIKDK-------------------KKL--------------DEIVEKSLKGAALWDEVKDRLK 141 (250)
T ss_pred Cc-ccHHHHHHHHHHhcCCCCH-------------------HHH--------------HHHHHHHHHHcCCchhhHHHHh
Confidence 87 8999999886443221000 000 01123356666653 2345
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +. +++.++|+.+++.+++|
T Consensus 142 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~-tiii~sH~~~~~~~~~d 213 (250)
T PRK14240 142 KSALG-----LSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK--DY-TIVIVTHNMQQASRISD 213 (250)
T ss_pred cCCCC-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CC-eEEEEEeCHHHHHhhCC
Confidence 55554 999999999999999999999999999999999999999999999853 44 55667777888999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|+++..|+.+++.
T Consensus 214 ~v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 214 KTAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988763
No 463
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-33 Score=317.56 Aligned_cols=207 Identities=25% Similarity=0.392 Sum_probs=164.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDD--DLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
.++|+|+|+++++||+++|+|||||||||||++|+|.+++ ....+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 4699999999999999999999999999999999999874 111389999999987532 124579999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 331 (1458)
++ .||+||+.+.....+.... + +. ...++..++.+|+.. ..+
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~~-~------------------~~--------------~~~~~~~l~~~~l~~~~~~~~~ 141 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKSK-H------------------KL--------------DRIVEESLKKAALWDEVKSELN 141 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH-H------------------HH--------------HHHHHHHHHHcCCCchhHHHHh
Confidence 87 8999999886432211000 0 00 011234567777753 244
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
..++ .||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++++ + ++++.++|+.+++.+++|
T Consensus 142 ~~~~-----~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~~~d 213 (250)
T PRK14262 142 KPGT-----RLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIRIAD 213 (250)
T ss_pred CChh-----hcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHHhCC
Confidence 4444 4999999999999999999999999999999999999999999999864 4 456667777888999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|+++..|+++++.
T Consensus 214 ~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 214 YIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred EEEEEECCEEEEecCHHHHH
Confidence 99999999999999988764
No 464
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-33 Score=319.31 Aligned_cols=207 Identities=22% Similarity=0.302 Sum_probs=165.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD--LKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|+++|. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 45999999999999999999999999999999999998641 12389999999987532 124579999999888
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 331 (1458)
++ .||+||+.++.+..+... +. + ....+..+++.+||.+ ..+
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~---------~~----------~--------------~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKD---------KK----------V--------------LDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCC---------HH----------H--------------HHHHHHHHHHHcCCCchhhhhhc
Confidence 87 599999988643211100 00 0 0112344677888753 334
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
..++ .||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++++.++|+.+++.+++|
T Consensus 159 ~~~~-----~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d 230 (267)
T PRK14237 159 KSAL-----TLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK--N-YTIIIVTHNMQQAARASD 230 (267)
T ss_pred CCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhcC
Confidence 4444 4999999999999999999999999999999999999999999999853 4 456667777889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|++++.|+++++.
T Consensus 231 ~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 231 YTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999998863
No 465
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.5e-32 Score=351.71 Aligned_cols=212 Identities=27% Similarity=0.410 Sum_probs=177.0
Q ss_pred eEEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCee
Q 000506 854 LSLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYP 933 (1458)
Q Consensus 854 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1458)
..++++|++|.++. +++.+|+|+|++++|||.+||+|+||||||||+++|+|..+ +.+|+|.+||++
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~--p~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYT--PQHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEe
Confidence 36899999998842 22459999999999999999999999999999999999987 478999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCC
Q 000506 934 KNQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-------LTNAMVGLP 1003 (1458)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 1003 (1458)
..+ ..+++.++||+|++.+++ .|++||+.++. .+.+. +.+.++++..++.+ -.|+.+|..
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAPF----EHVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCCH----HHHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 654 456788999999988876 59999997642 12222 23556666666543 346777654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEec
Q 000506 1004 GVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1083 (1458)
Q Consensus 1004 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~ 1083 (1458)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.||++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 45899999999999999999999999999999999999999999999984 5899999999985 4567999999985
Q ss_pred CcEEEEeCCC
Q 000506 1084 GGQVIYAGPL 1093 (1458)
Q Consensus 1084 gG~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 667 -G~i~~~g~~ 675 (694)
T TIGR01846 667 -GQIAESGRH 675 (694)
T ss_pred -CEEEEeCCH
Confidence 799999985
No 466
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-33 Score=317.52 Aligned_cols=208 Identities=25% Similarity=0.344 Sum_probs=165.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDL--KLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 469999999999999999999999999999999999987631 1379999999987531 124569999999999
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCC----ccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGL----DICAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL----~~~~d 331 (1458)
++.+|++||+.++....+... .+ +. ....+..++.+++ .+..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~-~~------------------~~--------------~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRD-RD------------------HL--------------MEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCC-HH------------------HH--------------HHHHHHHHHHcCcchhhhhhhc
Confidence 999999999987543221100 00 00 0011223444444 23445
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ ||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++++ + ++++.++|+.+++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 TPATG-----LSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--V-TTIIIVTHNMHQAARVSD 215 (252)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCC
Confidence 55555 999999999999999999999999999999999999999999999853 4 556667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
+|++|++|++++.|+++++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988864
No 467
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=4.1e-33 Score=312.92 Aligned_cols=210 Identities=22% Similarity=0.294 Sum_probs=167.6
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEEC--Ce-
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISIS--GY- 932 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~--g~- 932 (1458)
+.++|+++.++.... ...++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYL--PDSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEEecCCCc
Confidence 567888877742100 0012469999999999999999999999999999999999876 478999998 42
Q ss_pred -eCCc---c---cc-cceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCC
Q 000506 933 -PKNQ---A---TF-ARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL-TNAMVGLP 1003 (1458)
Q Consensus 933 -~~~~---~---~~-~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~ 1003 (1458)
+... . .. ++.+||++|++.+++.+||+|++.+..... ....+...+.++++++.+++.+. .+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 146 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP---- 146 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC----
Confidence 3211 1 11 356999999999999999999998764322 12333345568889999999763 3444
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEe
Q 000506 1004 GVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1082 (1458)
Q Consensus 1004 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~ 1082 (1458)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+.+|+++.+.
T Consensus 147 -~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 147 -PATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 3479999999999999999999999999999999999999999999999877999999999964 4567899998763
No 468
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-33 Score=326.43 Aligned_cols=211 Identities=22% Similarity=0.315 Sum_probs=167.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD--LKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
.++|+|+|++|++||+++|+|||||||||||++|+|+.++. ...+|+|.++|+++... ..++.++||+|++++
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 45999999999999999999999999999999999998631 01289999999998632 235679999999998
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVG 335 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 335 (1458)
++ .||+||+.|+....+.. .++. ....+..+++.++|.+..++.++
T Consensus 175 ~~-~ti~eNi~~~~~~~~~~----------~~~~-----------------------~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 FE-MSIFDNVAYGPRNNGIN----------DRKI-----------------------LEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred CC-CcHHHHHHhHHHhcCCC----------hHHH-----------------------HHHHHHHHHHHcCCcchhhhhhh
Confidence 85 79999999864322110 0000 00112335666666543334443
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEE
Q 000506 336 DQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIIL 415 (1458)
Q Consensus 336 ~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~l 415 (1458)
. ....|||||||||+|||||+.+|+||+|||||+|||+.+...+.+.|+++.+ + .++++++|..+++.+++|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEE
Confidence 3 3445999999999999999999999999999999999999999999998864 3 4666677888899999999999
Q ss_pred EcCCeEEEEcChhhHH
Q 000506 416 LSEGQIVYQGPREKVL 431 (1458)
Q Consensus 416 L~~G~iv~~G~~~~~~ 431 (1458)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999974
No 469
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-33 Score=358.92 Aligned_cols=211 Identities=28% Similarity=0.436 Sum_probs=179.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++. +++.+|+|+|++++|||.+||+||||||||||+++|+|..+ +.+|+|.+||.+.
T Consensus 338 ~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~i 404 (574)
T PRK11160 338 SLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQPI 404 (574)
T ss_pred eEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEh
Confidence 6899999998842 12468999999999999999999999999999999999876 4789999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc------ccccccCCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL------TNAMVGLPGV 1005 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~------~~~~vg~~~~ 1005 (1458)
.+ ..+++.++||+|++.+++ .|++||+.++. + +.+ ++.++++++.+++.+. .|+.+|.. .
T Consensus 405 ~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~~----~~~i~~al~~~~l~~~i~~p~GldT~vge~-g 473 (574)
T PRK11160 405 ADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NAS----DEALIEVLQQVGLEKLLEDDKGLNAWLGEG-G 473 (574)
T ss_pred hhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-ccC----HHHHHHHHHHcCCHHHHcCccccCchhcCC-C
Confidence 53 456788999999998876 59999998752 1 222 3457888888888754 35667643 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCc
Q 000506 1006 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1085 (1458)
Q Consensus 1006 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG 1085 (1458)
..||||||||++|||||+++|++|+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....+|++++|++ |
T Consensus 474 ~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~-G 549 (574)
T PRK11160 474 RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN-G 549 (574)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-C
Confidence 5799999999999999999999999999999999999999999999985 5899999999986 3467999999985 7
Q ss_pred EEEEeCCC
Q 000506 1086 QVIYAGPL 1093 (1458)
Q Consensus 1086 ~~~~~G~~ 1093 (1458)
+++..|+.
T Consensus 550 ~i~~~g~~ 557 (574)
T PRK11160 550 QIIEQGTH 557 (574)
T ss_pred eEEEeCCH
Confidence 99999874
No 470
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=3.6e-33 Score=317.57 Aligned_cols=198 Identities=25% Similarity=0.360 Sum_probs=167.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~~~-- 66 (251)
T PRK09544 4 LVSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVA--PDEGVIKRNGK-- 66 (251)
T ss_pred EEEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCc--
Confidence 478889988763 2459999999999999999999999999999999999876 47899999872
Q ss_pred CcccccceEEEEccCCCCCCC--CCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 935 NQATFARVSGYCEQNDIHSPH--VTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~--lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
+.++|++|++.+++. .|+.+++.+. .... .+.+.++++.+++.+..++.+ ..|||||
T Consensus 67 ------~~i~~v~q~~~~~~~l~~~~~~~~~~~------~~~~----~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq 125 (251)
T PRK09544 67 ------LRIGYVPQKLYLDTTLPLTVNRFLRLR------PGTK----KEDILPALKRVQAGHLIDAPM-----QKLSGGE 125 (251)
T ss_pred ------cCEEEeccccccccccChhHHHHHhcc------cccc----HHHHHHHHHHcCChHHHhCCh-----hhCCHHH
Confidence 358999999877765 4777776431 1111 234688999999988777654 4799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEEEEecCcEEEEeC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G 1091 (1458)
|||++||++|+.+|++|+|||||+|||+.+...+++.|++++++ |+|||+++|+++ ++.+.+|++++|+ + +++..|
T Consensus 126 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g 202 (251)
T PRK09544 126 TQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSG 202 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeC
Confidence 99999999999999999999999999999999999999999766 899999999986 5778899999995 4 578888
Q ss_pred CC
Q 000506 1092 PL 1093 (1458)
Q Consensus 1092 ~~ 1093 (1458)
+.
T Consensus 203 ~~ 204 (251)
T PRK09544 203 TP 204 (251)
T ss_pred CH
Confidence 75
No 471
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-33 Score=319.59 Aligned_cols=208 Identities=25% Similarity=0.334 Sum_probs=166.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCeecCCcc----ccceEEEecCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD--LKLTGKIKYCGHEFKEFV----PQRTCAYISQNDLH 255 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~ 255 (1458)
.+++|+|+|++|++||+++|+|||||||||||++|+|+++|. ...+|+|.++|+++.+.. .++.++|++|++.+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l 112 (276)
T PRK14271 33 GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNP 112 (276)
T ss_pred CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCcc
Confidence 356999999999999999999999999999999999998751 013899999999875431 24679999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccc----cc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDIC----AD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~----~d 331 (1458)
++ .||+||+.+......... . .+. ...+..+++.+||.+. .+
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~---------~----------~~~--------------~~~~~~~l~~~~l~~~~~~~l~ 158 (276)
T PRK14271 113 FP-MSIMDNVLAGVRAHKLVP---------R----------KEF--------------RGVAQARLTEVGLWDAVKDRLS 158 (276)
T ss_pred CC-ccHHHHHHHHHHhccCCC---------H----------HHH--------------HHHHHHHHHHcCCCchhhhHhh
Confidence 87 799999987543211000 0 000 0112346777888643 34
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|
T Consensus 159 ~~~~~-----LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d 230 (276)
T PRK14271 159 DSPFR-----LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISD 230 (276)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCC
Confidence 44444 999999999999999999999999999999999999999999999864 3 466667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|+++..|+++++.
T Consensus 231 ri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 231 RAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999998874
No 472
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3e-33 Score=334.95 Aligned_cols=210 Identities=27% Similarity=0.369 Sum_probs=177.1
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCc-----cccceEEEecCCC-
Q 000506 180 KRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQND- 253 (1458)
Q Consensus 180 ~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d- 253 (1458)
.+...+++||||.+++||+++|+|+||||||||.++|+|+++|+ +|+|.++|.+.+.. ..++.+-+|+||+
T Consensus 301 ~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~ 377 (539)
T COG1123 301 RGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPY 377 (539)
T ss_pred ccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCcc
Confidence 35677999999999999999999999999999999999999998 99999999872111 1235688888885
Q ss_pred -CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc-ccc
Q 000506 254 -LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI-CAD 331 (1458)
Q Consensus 254 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~d 331 (1458)
.+.|.+||++++.......+.... .+.+..++.+++..||+. ..+
T Consensus 378 ~SLnPr~tV~~~i~epL~~~~~~~~---------------------------------~~~~~rv~~ll~~VgL~~~~l~ 424 (539)
T COG1123 378 SSLNPRMTVGDILAEPLRIHGGGSG---------------------------------AERRARVAELLELVGLPPEFLD 424 (539)
T ss_pred cccCccccHHHHHHhHHhhhcccch---------------------------------HHHHHHHHHHHHHcCCCHHHHh
Confidence 589999999999876554332110 011224667899999986 466
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
.++.+ ||||||||++|||||+.+|+++++|||||.||++++.++.+.|+++.++.+ .+.+.++||...+...||
T Consensus 425 ryP~e-----lSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g-~t~lfISHDl~vV~~i~d 498 (539)
T COG1123 425 RYPHE-----LSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELG-LTYLFISHDLAVVRYIAD 498 (539)
T ss_pred cCchh-----cCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhC-CEEEEEeCCHHHHHhhCc
Confidence 66665 999999999999999999999999999999999999999999999998765 566778999999999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
||++|++|+||+.||.+++.
T Consensus 499 rv~vm~~G~iVE~G~~~~v~ 518 (539)
T COG1123 499 RVAVMYDGRIVEEGPTEKVF 518 (539)
T ss_pred eEEEEECCeEEEeCCHHHHh
Confidence 99999999999999998884
No 473
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=322.13 Aligned_cols=206 Identities=23% Similarity=0.318 Sum_probs=163.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDL--KLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
..+|+|+|++|++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 459999999999999999999999999999999999986310 1289999999986421 124569999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc----cccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD----ICAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 331 (1458)
++. ||+||+.+.+...+... + . ...++.+++.+++. +..|
T Consensus 106 ~~~-tv~enl~~~~~~~~~~~------~---------------~--------------~~~~~~~l~~~~l~~~l~~~~~ 149 (269)
T PRK14259 106 FPK-SIYENIAFGARINGYTG------D---------------M--------------DELVERSLRKAAVWDECKDKLN 149 (269)
T ss_pred chh-hHHHHHhhhhhhcCCcH------H---------------H--------------HHHHHHHHHHhCCcchhhhhhC
Confidence 874 99999988654322100 0 0 00123345666653 3345
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+.+ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ + .+|+.++|+.+++.+++|
T Consensus 150 ~~~~~-----LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d 221 (269)
T PRK14259 150 ESGYS-----LSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--N-FTIVIVTHNMQQAVRVSD 221 (269)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcC
Confidence 55544 999999999999999999999999999999999999999999999853 4 456667788889999999
Q ss_pred EEEEEcC-----------CeEEEEcChhhHHH
Q 000506 412 NIILLSE-----------GQIVYQGPREKVLE 432 (1458)
Q Consensus 412 ~v~lL~~-----------G~iv~~G~~~~~~~ 432 (1458)
++++|++ |++++.|+++++.+
T Consensus 222 ~i~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 222 MTAFFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EEEEEeccccccccccccceEEEeCCHHHHHh
Confidence 9999996 67899999988743
No 474
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-33 Score=320.54 Aligned_cols=205 Identities=22% Similarity=0.321 Sum_probs=169.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc---ccceEEEecCCCC-CCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV---PQRTCAYISQNDL-HFGE 258 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 258 (1458)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35999999999999999999999999999999999999988 999999999875422 2457999999974 5777
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
.||.||+.+.....+.. +.+ ....++.+++.+||.+..++.+..
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP----------REE------------------------MIKRVDEALLAVNMLDFKTREPAR-- 140 (277)
T ss_pred CCHHHHHHhhHHHcCCC----------HHH------------------------HHHHHHHHHHHCCCHhHhhCCccc--
Confidence 89999998754321110 000 001245678889998888877766
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++. .+|+|++|++
T Consensus 141 ---LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 141 ---LSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQ-LTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999876434 45555677777776 6999999999
Q ss_pred CeEEEEcChhhHH
Q 000506 419 GQIVYQGPREKVL 431 (1458)
Q Consensus 419 G~iv~~G~~~~~~ 431 (1458)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988864
No 475
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-34 Score=294.62 Aligned_cols=216 Identities=25% Similarity=0.386 Sum_probs=185.4
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCC
Q 000506 176 LPSKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQN 252 (1458)
Q Consensus 176 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~ 252 (1458)
+.++.+.+.||+|+|..|++|.+|+++|||||||||||.+++.+++.+ +|+|+++|+++.+... .+.++.+-|+
T Consensus 7 v~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILkQ~ 83 (252)
T COG4604 7 VSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILKQE 83 (252)
T ss_pred hhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHHhh
Confidence 345567788999999999999999999999999999999999999988 9999999999876543 3568889999
Q ss_pred CCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccc
Q 000506 253 DLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADT 332 (1458)
Q Consensus 253 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 332 (1458)
......+||+|-+.|+---...|. . . .++...++..++-|+|++..|.
T Consensus 84 N~i~~rlTV~dLv~FGRfPYSqGR---l----t-------------------------~eD~~~I~~aieyl~L~~l~dr 131 (252)
T COG4604 84 NHINSRLTVRDLVGFGRFPYSQGR---L----T-------------------------KEDRRIINEAIEYLHLEDLSDR 131 (252)
T ss_pred chhhheeEHHHHhhcCCCcccCCC---C----c-------------------------hHHHHHHHHHHHHhcccchHHH
Confidence 888889999999999632111111 0 0 0122346778899999999988
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCE
Q 000506 333 MVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDN 412 (1458)
Q Consensus 333 ~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 412 (1458)
...+ ||||||||.-||..++.+.+.++||||.+.||-..+.++++.||+++++.++|+|+. .|+...+..++|.
T Consensus 132 yLd~-----LSGGQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviV-lHDINfAS~YsD~ 205 (252)
T COG4604 132 YLDE-----LSGGQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVV-LHDINFASCYSDH 205 (252)
T ss_pred hHHh-----cccchhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEE-EecccHHHhhhhh
Confidence 8766 999999999999999999999999999999999999999999999999998877765 5778899999999
Q ss_pred EEEEcCCeEEEEcChhhHHH
Q 000506 413 IILLSEGQIVYQGPREKVLE 432 (1458)
Q Consensus 413 v~lL~~G~iv~~G~~~~~~~ 432 (1458)
|+-|++|+++.+|+++++.+
T Consensus 206 IVAlK~G~vv~~G~~~eii~ 225 (252)
T COG4604 206 IVALKNGKVVKQGSPDEIIQ 225 (252)
T ss_pred eeeecCCEEEecCCHHHhcC
Confidence 99999999999999999864
No 476
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-33 Score=334.06 Aligned_cols=220 Identities=18% Similarity=0.281 Sum_probs=175.7
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.+.++|+++.+.. ...+.+|+|+|++|++|+++||+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 21 mL~lknL~~~~~~----------~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~--P~sGeI~I~G~~~ 88 (549)
T PRK13545 21 FDKLKDLFFRSKD----------GEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTM--PNKGTVDIKGSAA 88 (549)
T ss_pred eeEEEEEEEecCC----------CccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCceEEEECCEee
Confidence 4667777665531 112469999999999999999999999999999999999876 4789999999752
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000506 935 NQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRK 1014 (1458)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1014 (1458)
++.+...+.+.+||+|++.+..... ..+.++..+.++++++.+++.+..+..+ +.|||||||
T Consensus 89 ----------~i~~~~~l~~~lTV~EnL~l~~~~~---~~~~~e~~e~i~elLe~lgL~~~ld~~~-----~~LSGGQrQ 150 (549)
T PRK13545 89 ----------LIAISSGLNGQLTGIENIELKGLMM---GLTKEKIKEIIPEIIEFADIGKFIYQPV-----KTYSSGMKS 150 (549)
T ss_pred ----------eEEeccccCCCCcHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCc-----ccCCHHHHH
Confidence 1222344567789999998754332 1233444556788999999988777764 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1015 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
|++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|.+ |++++.|+..
T Consensus 151 RVaLArAL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~~ 228 (549)
T PRK13545 151 RLGFAISVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDIK 228 (549)
T ss_pred HHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999999999999999999999878999999999986 57788999999985 7899998764
Q ss_pred cchHHHHHHHHh
Q 000506 1095 RQSQKLVEYFEA 1106 (1458)
Q Consensus 1095 ~~~~~~~~~f~~ 1106 (1458)
+.......|++.
T Consensus 229 el~~~~~~~~~~ 240 (549)
T PRK13545 229 EVVDHYDEFLKK 240 (549)
T ss_pred HHHhhHHHHHHH
Confidence 322233344443
No 477
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-33 Score=317.17 Aligned_cols=207 Identities=25% Similarity=0.382 Sum_probs=164.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD--DDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|++|++||+++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14251 17 YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTP 96 (251)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCcc
Confidence 459999999999999999999999999999999999986 2111389999999987431 124569999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc----cccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD----ICAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 331 (1458)
++ .||+||+.+.....+.... + . ....++.+++.+||. +..+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~-----~--------------~--------------~~~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14251 97 FP-FSVYDNVAYGLKIAGVKDK-----E--------------L--------------IDQRVEESLKQAAIWKETKDNLD 142 (251)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH-----H--------------H--------------HHHHHHHHHHHcCCCcchHHHhc
Confidence 86 7999999875432211000 0 0 001134467777874 2344
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
..+++ ||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|
T Consensus 143 ~~~~~-----LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiiiisH~~~~~~~~~d 214 (251)
T PRK14251 143 RNAQA-----FSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH--Q-YTFIMVTHNLQQAGRISD 214 (251)
T ss_pred cChhh-----CCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc--C-CeEEEEECCHHHHHhhcC
Confidence 44444 999999999999999999999999999999999999999999999853 4 566667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
+|++|++|+++..|+.+++.
T Consensus 215 ~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 215 QTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988763
No 478
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-33 Score=316.74 Aligned_cols=207 Identities=24% Similarity=0.328 Sum_probs=163.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCeecCC-c---cccceEEEecCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD--LKLTGKIKYCGHEFKE-F---VPQRTCAYISQNDLH 255 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~-~---~~~~~~~yv~Q~d~~ 255 (1458)
++++|+|+|+++++||+++|+||||||||||+++|+|..+|. ...+|+|.++|.++.. . ..++.++|++|++.+
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~ 94 (249)
T PRK14253 15 ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNP 94 (249)
T ss_pred CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCc
Confidence 356999999999999999999999999999999999998752 0138999999988742 1 124579999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 331 (1458)
++ .||+||+.++....+.... ... ...++..++.+|+.+ ..+
T Consensus 95 ~~-~tv~~~l~~~~~~~~~~~~-------------------~~~--------------~~~~~~~~~~~~l~~~~~~~~~ 140 (249)
T PRK14253 95 FP-MSIYENVAYGLRAQGIKDK-------------------KVL--------------DEVVERSLRGAALWDEVKDRLK 140 (249)
T ss_pred Cc-ccHHHHHHhHHHhcCCCch-------------------HHH--------------HHHHHHHHHHcCCchhhhHHhh
Confidence 87 7999999876432211000 000 011233556666643 234
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.+++|
T Consensus 141 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d 212 (249)
T PRK14253 141 SHAFG-----LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISD 212 (249)
T ss_pred cCccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCC
Confidence 44444 999999999999999999999999999999999999999999999864 4 456666777889999999
Q ss_pred EEEEEcCCeEEEEcChhhH
Q 000506 412 NIILLSEGQIVYQGPREKV 430 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~ 430 (1458)
++++|++|+++..|+.+++
T Consensus 213 ~i~~l~~G~i~~~g~~~~~ 231 (249)
T PRK14253 213 RTAFFLMGELVEHDDTQVI 231 (249)
T ss_pred EEEEEECCEEEEeCCHHHH
Confidence 9999999999999998775
No 479
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-33 Score=319.27 Aligned_cols=204 Identities=21% Similarity=0.303 Sum_probs=163.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCcccEEEECCeecCCc-----cccceEEEecCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD-----DDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQN 252 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~-----~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~ 252 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|+.+ |+ +|+|.++|+++... ..++.++|++|+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 110 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQK 110 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecC
Confidence 359999999999999999999999999999999999864 45 89999999987532 124579999999
Q ss_pred CCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc----c
Q 000506 253 DLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD----I 328 (1458)
Q Consensus 253 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~ 328 (1458)
+.+++. ||+||+.+.....+... + . .. +..+...++.+|+. +
T Consensus 111 ~~~~~~-tv~enl~~~~~~~~~~~--~---~--------------~~--------------~~~~~~~l~~~~l~~~~~~ 156 (268)
T PRK14248 111 PNPFPK-SIYNNITHALKYAGERR--K---S--------------VL--------------DEIVEESLTKAALWDEVKD 156 (268)
T ss_pred CccCcc-cHHHHHHHHHHhcCCCc--H---H--------------HH--------------HHHHHHHHHHcCCCcchHH
Confidence 988875 99999987543211000 0 0 00 01123356666764 2
Q ss_pred cccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHh
Q 000506 329 CADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYD 408 (1458)
Q Consensus 329 ~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~ 408 (1458)
..++.+++ ||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.+
T Consensus 157 ~~~~~~~~-----LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~ 228 (268)
T PRK14248 157 RLHSSALS-----LSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALR 228 (268)
T ss_pred HHhcCccc-----CCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHH
Confidence 34555555 999999999999999999999999999999999999999999999854 4 456667777888999
Q ss_pred ccCEEEEEcCCeEEEEcChhhHH
Q 000506 409 LFDNIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 409 ~~D~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++|+|++|++|++++.|+.+++.
T Consensus 229 ~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 229 VSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred hCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999988764
No 480
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=3.8e-33 Score=312.57 Aligned_cols=194 Identities=25% Similarity=0.358 Sum_probs=161.1
Q ss_pred eEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcccccceEEEEccCCCCC--CCCCHHHHHHHHH
Q 000506 889 GVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQATFARVSGYCEQNDIHS--PHVTVYESLLFSA 966 (1458)
Q Consensus 889 ~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTV~e~l~f~~ 966 (1458)
+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.. ..++.++|++|++.++ ..+||.|++.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIP--PAKGTVKVAGASPG--KGWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccch--HhhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 4688999999999999999999999999876 47899999998753 2356799999998764 3489999998753
Q ss_pred hhhcC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHH
Q 000506 967 WLRLS-SDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1045 (1458)
Q Consensus 967 ~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~ 1045 (1458)
..... .....+..++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~ 151 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPV-----GELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQEL 151 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 21100 00112233456889999999988777665 3799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcEEEEeCCCC
Q 000506 1046 VMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLG 1094 (1458)
Q Consensus 1046 i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~~ 1094 (1458)
+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|+..
T Consensus 152 l~~~l~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l-~-G~i~~~~~~~ 197 (223)
T TIGR03771 152 LTELFIELAGAGTAILMTTHDLA-QAMATCDRVVLL-N-GRVIADGTPQ 197 (223)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHH
Confidence 99999999877999999999986 577889999999 5 7899998864
No 481
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=4.3e-33 Score=350.58 Aligned_cols=214 Identities=23% Similarity=0.300 Sum_probs=175.9
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECC-----
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISG----- 931 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g----- 931 (1458)
+++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|.....+.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~ 68 (520)
T TIGR03269 2 EVKNLTKKFD-------------GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEK 68 (520)
T ss_pred EEEEEEEEEC-------------CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccc
Confidence 5678877662 2469999999999999999999999999999999999852014789999972
Q ss_pred ------------------eeCC----------c---ccccceEEEEccC-CCCCCCCCHHHHHHHHHhhhcCCCCCHHHH
Q 000506 932 ------------------YPKN----------Q---ATFARVSGYCEQN-DIHSPHVTVYESLLFSAWLRLSSDIDSKTR 979 (1458)
Q Consensus 932 ------------------~~~~----------~---~~~~~~~gyv~Q~-~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~ 979 (1458)
.+.. . ...++.+||++|+ +.+++.+||+|++.+..... ..+.++.
T Consensus 69 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~ 145 (520)
T TIGR03269 69 CGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEI---GYEGKEA 145 (520)
T ss_pred ccccccccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 1110 0 1234579999997 67888899999998865432 1233445
Q ss_pred HHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CC
Q 000506 980 KMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GR 1058 (1458)
Q Consensus 980 ~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~ 1058 (1458)
+++++++++.+||.+..+..+ ..|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+
T Consensus 146 ~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~ 220 (520)
T TIGR03269 146 VGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGI 220 (520)
T ss_pred HHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCc
Confidence 567899999999988777664 479999999999999999999999999999999999999999999999654 89
Q ss_pred EEEEEecCccHHHHHhhceEEEEecCcEEEEeCCC
Q 000506 1059 TVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1059 tvi~t~Hq~s~~i~~~~D~vlll~~gG~~~~~G~~ 1093 (1458)
|||+++|++. .+.+.||++++|++ |++++.|+.
T Consensus 221 tviivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 253 (520)
T TIGR03269 221 SMVLTSHWPE-VIEDLSDKAIWLEN-GEIKEEGTP 253 (520)
T ss_pred EEEEEeCCHH-HHHHhcCEEEEEeC-CEEeeecCH
Confidence 9999999986 46788999999986 788888875
No 482
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.5e-33 Score=366.52 Aligned_cols=211 Identities=27% Similarity=0.455 Sum_probs=178.6
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++|+++. +++++|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+.
T Consensus 463 ~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~l 529 (694)
T TIGR03375 463 EIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ--PTEGSVLLDGVDI 529 (694)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEh
Confidence 6899999999842 13469999999999999999999999999999999999987 4789999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEP-------LTNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 1004 (1458)
.+ ..+++.++||+|++.+++ .|++||+.++. .+.+. +.+.++++..++.+ -.|+.+|..+
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G 599 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYADD----EEILRAAELAGVTEFVRRHPDGLDMQIGERG 599 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCCCH----HHHHHHHHHcChHHHHHhCcccccceecCCC
Confidence 53 457889999999999886 59999998742 12222 33566677666644 3467777544
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
.+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 600 -~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~- 674 (694)
T TIGR03375 600 -RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN- 674 (694)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC-
Confidence 5799999999999999999999999999999999999999999999985 4799999999985 5678999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|++++.|+.
T Consensus 675 G~i~e~G~~ 683 (694)
T TIGR03375 675 GRIVADGPK 683 (694)
T ss_pred CEEEeeCCH
Confidence 799999984
No 483
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.7e-33 Score=280.12 Aligned_cols=202 Identities=25% Similarity=0.357 Sum_probs=172.7
Q ss_pred cccccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc-------cceEEEec
Q 000506 178 SKKRKIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP-------QRTCAYIS 250 (1458)
Q Consensus 178 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~ 250 (1458)
....+..||++|++.|++||-++|+|||||||||||-+|+|+..|+ +|+|.+.|+++..+.. .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 4456788999999999999999999999999999999999999998 9999999999876532 36799999
Q ss_pred CCCCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccc
Q 000506 251 QNDLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICA 330 (1458)
Q Consensus 251 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 330 (1458)
|...++|+||..||+...+.++|-+.+.. .......|+.+||.+..
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~~~----------------------------------~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSADS----------------------------------RAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCccccH----------------------------------HHHHHHHHHHhCccccc
Confidence 99999999999999998777665321100 01123478899999988
Q ss_pred cccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhcc
Q 000506 331 DTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLF 410 (1458)
Q Consensus 331 dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~ 410 (1458)
+..++. |||||+|||+||||+...|+|||-||||-+||..|..+|.+.|-.+.++. +++++.++|+ +....-|
T Consensus 141 ~HyP~q-----LSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~-G~TlVlVTHD-~~LA~Rc 213 (228)
T COG4181 141 THYPAQ-----LSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRER-GTTLVLVTHD-PQLAARC 213 (228)
T ss_pred ccCccc-----cCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhc-CceEEEEeCC-HHHHHhh
Confidence 877777 99999999999999999999999999999999999999999999998865 4666667776 4567789
Q ss_pred CEEEEEcCCeEEE
Q 000506 411 DNIILLSEGQIVY 423 (1458)
Q Consensus 411 D~v~lL~~G~iv~ 423 (1458)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999874
No 484
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=314.99 Aligned_cols=207 Identities=24% Similarity=0.300 Sum_probs=164.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDL--KLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+.+|+|+|++|++|++++|+||||||||||+++|+|+++|+. ..+|+|.++|.++... ..++.++||+|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 96 (251)
T PRK14249 17 HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNP 96 (251)
T ss_pred eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCcc
Confidence 459999999999999999999999999999999999998741 1259999999987532 124679999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 331 (1458)
++. ||+||+.+.....+.... + +. ....+.+++.+||.+ ..+
T Consensus 97 ~~~-tv~enl~~~~~~~~~~~~-~------------------~~--------------~~~~~~~l~~~~l~~~l~~~~~ 142 (251)
T PRK14249 97 FPK-SIFDNVAFGPRMLGTTAQ-S------------------RL--------------DEVVEKSLRQAALWDEVKDNLH 142 (251)
T ss_pred CcC-cHHHHHhhHHHhcCCChh-h------------------HH--------------HHHHHHHHHHhCCchhhhhHhh
Confidence 875 999999886543221100 0 00 001233455566542 234
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. . + .+|+.++|+.+++.+++|
T Consensus 143 ~~~~~-----LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tilivsh~~~~~~~~~d 214 (251)
T PRK14249 143 KSGLA-----LSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-Q-N-YTIAIVTHNMQQAARASD 214 (251)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHhhCC
Confidence 44444 99999999999999999999999999999999999999999999984 2 4 466667788899999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|++++.|+++++.
T Consensus 215 ~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 215 WTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred EEEEEeCCeEEEeCCHHHHH
Confidence 99999999999999988764
No 485
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-33 Score=319.46 Aligned_cols=214 Identities=27% Similarity=0.369 Sum_probs=170.3
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCcccEEEECCeecCCccc---cceEEEecCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD-----LKLTGKIKYCGHEFKEFVP---QRTCAYISQND 253 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~-----~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d 253 (1458)
++.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|+++..... ++.++|++|++
T Consensus 13 ~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~ 92 (272)
T PRK13547 13 HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAA 92 (272)
T ss_pred CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccC
Confidence 346999999999999999999999999999999999999874 1137999999998764322 34689999998
Q ss_pred CCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCccccccc
Q 000506 254 LHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTM 333 (1458)
Q Consensus 254 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 333 (1458)
..++.+||+||+.+....... ... ... .+ ....++.+++.+||++..++.
T Consensus 93 ~~~~~~tv~e~l~~~~~~~~~--~~~---~~~-----------~~--------------~~~~~~~~l~~~~l~~~~~~~ 142 (272)
T PRK13547 93 QPAFAFSAREIVLLGRYPHAR--RAG---ALT-----------HR--------------DGEIAWQALALAGATALVGRD 142 (272)
T ss_pred CCCCCCcHHHHHhhccccccc--ccc---cCC-----------HH--------------HHHHHHHHHHHcCcHhhhcCC
Confidence 766678999999875321000 000 000 00 011235578899998877777
Q ss_pred ccCccCCCCChHHHHHHHHHHHHh---------cCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChh
Q 000506 334 VGDQMRRGVSGGQKKRVTTGEMLV---------GPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAP 404 (1458)
Q Consensus 334 vg~~~~rGLSGGqkkRvsia~aL~---------~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~ 404 (1458)
+++ |||||||||+||++|+ .+|++|+|||||+|||+.++..+.+.|+++.+..+ ++++.++|+.+
T Consensus 143 ~~~-----LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tviiisH~~~ 216 (272)
T PRK13547 143 VTT-----LSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWN-LGVLAIVHDPN 216 (272)
T ss_pred ccc-----CCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHH
Confidence 766 9999999999999999 59999999999999999999999999999876434 45666777788
Q ss_pred HHHhccCEEEEEcCCeEEEEcChhhHH
Q 000506 405 EAYDLFDNIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 405 ~~~~~~D~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++.+++|++++|++|++++.|+.+++.
T Consensus 217 ~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 217 LAARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHHhCCEEEEEECCeEEEecCHHHHc
Confidence 999999999999999999999987763
No 486
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.9e-33 Score=353.93 Aligned_cols=209 Identities=30% Similarity=0.486 Sum_probs=171.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCCCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDLHFGE 258 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 258 (1458)
++++|+|+|++++|||.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+|.
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~- 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS- 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-
Confidence 456999999999999999999999999999999999999998 9999999999987654 678999999999997
Q ss_pred CCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCcc
Q 000506 259 MTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQM 338 (1458)
Q Consensus 259 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 338 (1458)
-||+|||.++..- . .++++ .+++.... ..|.+. .|++..||.||+ .
T Consensus 417 ~TI~~NI~~g~~~------------a----------t~eei---~~a~k~a~-----~~d~I~---~lp~g~dt~vge-~ 462 (567)
T COG1132 417 GTIRENIALGRPD------------A----------TDEEI---EEALKLAN-----AHEFIA---NLPDGYDTIVGE-R 462 (567)
T ss_pred ccHHHHHhcCCCC------------C----------CHHHH---HHHHHHhC-----hHHHHH---hCcccccceecC-C
Confidence 5999999986320 0 01122 22222211 112222 357789999995 4
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcC
Q 000506 339 RRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSE 418 (1458)
Q Consensus 339 ~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~ 418 (1458)
...||||||||++||||++.+|++|+||||||+||+.+...|.+.++++.+ ++|+++ +.|....+.+ +|+|++|++
T Consensus 463 G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~ii-IaHRlsti~~-aD~IiVl~~ 538 (567)
T COG1132 463 GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLI-IAHRLSTIKN-ADRIIVLDN 538 (567)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEE-EeccHhHHHh-CCEEEEEEC
Confidence 455999999999999999999999999999999999999999999997764 467777 5555555555 999999999
Q ss_pred CeEEEEcChhhHHH
Q 000506 419 GQIVYQGPREKVLE 432 (1458)
Q Consensus 419 G~iv~~G~~~~~~~ 432 (1458)
|++++.|+++++..
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999875
No 487
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.7e-33 Score=307.46 Aligned_cols=194 Identities=23% Similarity=0.319 Sum_probs=163.5
Q ss_pred EEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCC
Q 000506 856 LAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKN 935 (1458)
Q Consensus 856 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1458)
+.++|+++.+. ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|++..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~ 66 (200)
T PRK13540 2 LDVIELDFDYH-------------DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIK 66 (200)
T ss_pred EEEEEEEEEeC-------------CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccc
Confidence 56788887663 2469999999999999999999999999999999999876 47899999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000506 936 Q--ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQR 1013 (1458)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1013 (1458)
. ..+++.++|++|+..+++..||+|++.+.... .. . ...++++++.+++.+..+..+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~~~~~~~~--~~----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 133 (200)
T PRK13540 67 KDLCTYQKQLCFVGHRSGINPYLTLRENCLYDIHF--SP----G--AVGITELCRLFSLEHLIDYPC-----GLLSSGQK 133 (200)
T ss_pred cCHHHHHhheEEeccccccCcCCCHHHHHHHHHhc--Cc----c--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHH
Confidence 2 34567899999998888899999999886421 11 1 235789999999987666654 37999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEE
Q 000506 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELL 1079 (1458)
Q Consensus 1014 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vl 1079 (1458)
||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ..+.+|...
T Consensus 134 ~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 134 RQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 9999999999999999999999999999999999999998777999999999975 445566543
No 488
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=3.8e-33 Score=302.66 Aligned_cols=160 Identities=27% Similarity=0.477 Sum_probs=143.2
Q ss_pred ecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCcc----cccceEEEEccCC---CCCCC
Q 000506 883 LLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQA----TFARVSGYCEQND---IHSPH 955 (1458)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~ 955 (1458)
+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|+. .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRP--PASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 7999999999999999999999999999999999876 4789999999876432 2456799999984 57788
Q ss_pred CCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000506 956 VTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPT 1035 (1458)
Q Consensus 956 lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1035 (1458)
+|++||+.+... ||||||||++||+||+.+|++|+|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999976421 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1036 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1036 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~-G~ 181 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYE-GR 181 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecC-Cc
Confidence 999999999999999999877999999999986 67788999999986 44
No 489
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-33 Score=321.16 Aligned_cols=204 Identities=22% Similarity=0.356 Sum_probs=163.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--C---CCCcccEEEECCeecCCc-----cccceEEEecCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD--D---DLKLTGKIKYCGHEFKEF-----VPQRTCAYISQN 252 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~--~---~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~ 252 (1458)
.++|+|+|++|++||+++|+|||||||||||++|+|+.+ | + +|+|.++|.++... ..++.++|++|+
T Consensus 52 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~ 128 (286)
T PRK14275 52 FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVFQK 128 (286)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEECCC
Confidence 359999999999999999999999999999999999854 3 5 99999999987532 124579999999
Q ss_pred CCCCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc----c
Q 000506 253 DLHFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD----I 328 (1458)
Q Consensus 253 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~ 328 (1458)
+.+++. ||+||+.+..+..+.... + +. ....+.+++.+|+. +
T Consensus 129 ~~l~~~-tv~enl~~~~~~~~~~~~-~------------------~~--------------~~~~~~~l~~~~l~~~l~~ 174 (286)
T PRK14275 129 PNPFPK-SIFDNIAYGPRLHGINDK-K------------------QL--------------EEIVEKSLRKAALWDEVSD 174 (286)
T ss_pred CCCCcc-CHHHHHHhHHHhcCCCcH-H------------------HH--------------HHHHHHHHHHhCCccchhh
Confidence 988875 999999986432211000 0 00 01123356666663 3
Q ss_pred cccccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHh
Q 000506 329 CADTMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYD 408 (1458)
Q Consensus 329 ~~dt~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~ 408 (1458)
..++.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ + .+|+.++|+.+++.+
T Consensus 175 ~~~~~~~~-----LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tvIivsH~~~~~~~ 246 (286)
T PRK14275 175 RLDKNALG-----LSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG--S-YTIMIVTHNMQQASR 246 (286)
T ss_pred HhhCChhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHH
Confidence 34555544 999999999999999999999999999999999999999999999864 3 456667788889999
Q ss_pred ccCEEEEEcCCeEEEEcChhhHH
Q 000506 409 LFDNIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 409 ~~D~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++|++++|++|+++..|+.+++.
T Consensus 247 ~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 247 VSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred hCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999988764
No 490
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=7.5e-33 Score=348.90 Aligned_cols=221 Identities=21% Similarity=0.272 Sum_probs=180.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCC---ceeeEEEECC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YTEGDISISG 931 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1458)
.++++|+++.++.. .+.+.+|+|||++|++||++||+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 75 (529)
T PRK15134 5 LLAIENLSVAFRQQ---------QTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHG 75 (529)
T ss_pred eEEEeceEEEecCC---------CCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECC
Confidence 37889998877410 01246999999999999999999999999999999999987631 3689999999
Q ss_pred eeCCcc------ccc-ceEEEEccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc---cccc
Q 000506 932 YPKNQA------TFA-RVSGYCEQNDI--HSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL---TNAM 999 (1458)
Q Consensus 932 ~~~~~~------~~~-~~~gyv~Q~~~--~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~ 999 (1458)
.+.... ..+ +.+||++|++. +.+.+||+|++.+..... ...+..+.+++++++++.+||.+. .++.
T Consensus 76 ~~i~~~~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~ 153 (529)
T PRK15134 76 ESLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLH--RGMRREAARGEILNCLDRVGIRQAAKRLTDY 153 (529)
T ss_pred EecccCCHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHCCCCChHHHHhhC
Confidence 876421 122 47999999974 567789999987643221 123344556778999999999763 3555
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceE
Q 000506 1000 VGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1458)
Q Consensus 1000 vg~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hq~s~~i~~~~D~v 1078 (1458)
+ ..|||||||||+||+||+.+|++|+|||||+|||+.++..++++|++++++ |+|||+++|++. .+.+.||++
T Consensus 154 ~-----~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~dri 227 (529)
T PRK15134 154 P-----HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLS-IVRKLADRV 227 (529)
T ss_pred C-----cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHH-HHHHhcCEE
Confidence 4 479999999999999999999999999999999999999999999999775 899999999986 577889999
Q ss_pred EEEecCcEEEEeCCC
Q 000506 1079 LLMKRGGQVIYAGPL 1093 (1458)
Q Consensus 1079 lll~~gG~~~~~G~~ 1093 (1458)
++|++ |++++.|+.
T Consensus 228 ~~l~~-G~i~~~g~~ 241 (529)
T PRK15134 228 AVMQN-GRCVEQNRA 241 (529)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 788888875
No 491
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=315.41 Aligned_cols=207 Identities=23% Similarity=0.314 Sum_probs=163.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDD--LKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 98 (253)
T PRK14261 19 KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNP 98 (253)
T ss_pred eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCcc
Confidence 46999999999999999999999999999999999987531 11389999999987542 124569999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcc----ccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDI----CAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 331 (1458)
++. ||+||+.|..+..+.... .+. ...+..+++.++|.+ ..+
T Consensus 99 ~~~-tv~eni~~~~~~~~~~~~-------------------~~~--------------~~~~~~~l~~~~l~~~l~~~~~ 144 (253)
T PRK14261 99 FPK-SIYENVAYGPRIHGEKNK-------------------KTL--------------DTIVEKSLKGAALWDEVKDRLH 144 (253)
T ss_pred Ccc-cHHHHHHhhHHhcCCCCH-------------------HHH--------------HHHHHHHHHHhcCchhhHHHhh
Confidence 875 999999986543221000 000 011233566666642 234
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+++ ||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ + .+++.++|+.+++.+++|
T Consensus 145 ~~~~~-----LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d 216 (253)
T PRK14261 145 DSALS-----LSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSD 216 (253)
T ss_pred cChhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCC
Confidence 44444 999999999999999999999999999999999999999999999864 3 456667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
++++|++|+++..|+.+++.
T Consensus 217 ~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 217 YTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred EEEEEECCEEEEcCCHHHHH
Confidence 99999999999999988763
No 492
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=313.71 Aligned_cols=207 Identities=22% Similarity=0.317 Sum_probs=162.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLD--DDLKLTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
+++|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.+
T Consensus 18 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (252)
T PRK14255 18 FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNP 97 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCcc
Confidence 459999999999999999999999999999999999865 3212389999999987431 124579999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc----cccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD----ICAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 331 (1458)
++ .||+||+.+.....+.... + . . .......++.+|+. +..+
T Consensus 98 ~~-~tv~~nl~~~~~~~~~~~~-~---~---------------~--------------~~~~~~~l~~~~l~~~i~~~~~ 143 (252)
T PRK14255 98 FP-FSIYENVIYGLRLAGVKDK-A---V---------------L--------------DEAVETSLKQAAIWDEVKDHLH 143 (252)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH-H---H---------------H--------------HHHHHHHHHHcCCccchhhHHh
Confidence 87 6999999886443221100 0 0 0 00112345555553 3344
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
..+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++++.++|+.+++.+.+|
T Consensus 144 ~~~~~-----LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d 215 (252)
T PRK14255 144 ESALS-----LSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISD 215 (252)
T ss_pred cCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCC
Confidence 55555 999999999999999999999999999999999999999999999864 3 456667788889999999
Q ss_pred EEEEEcCCeEEEEcChhhHH
Q 000506 412 NIILLSEGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~~G~iv~~G~~~~~~ 431 (1458)
+|++|++|+++.+|++.++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 216 KTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 493
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.2e-33 Score=362.72 Aligned_cols=206 Identities=25% Similarity=0.381 Sum_probs=166.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 259 (1458)
+++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+|+.
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~g- 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFEG- 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhhc-
Confidence 46999999999999999999999999999999999999998 9999999999877643 6789999999999965
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
|++|||.++.. .. +++++.+.++.+.+. + .++ .|+...||.+|+. .
T Consensus 568 Ti~eNi~l~~~----~~------------------~~~~i~~al~~~~l~--------~-~i~--~lp~gl~t~i~e~-G 613 (710)
T TIGR03796 568 TVRDNLTLWDP----TI------------------PDADLVRACKDAAIH--------D-VIT--SRPGGYDAELAEG-G 613 (710)
T ss_pred cHHHHhhCCCC----CC------------------CHHHHHHHHHHhCCH--------H-HHH--hCcCcccceeccC-C
Confidence 99999986421 00 111222222222111 1 111 3667889999874 4
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
..||||||||++|||||+++|++++||||||+||+.+..++.+.|++ .++|+|++. |.. +....+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Iiit-Hrl-~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCIIVA-HRL-STIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEEEe-cCH-HHHHhCCEEEEEeCC
Confidence 66999999999999999999999999999999999999999999986 255666554 444 445679999999999
Q ss_pred eEEEEcChhhHHH
Q 000506 420 QIVYQGPREKVLE 432 (1458)
Q Consensus 420 ~iv~~G~~~~~~~ 432 (1458)
+++.+|+++++.+
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999864
No 494
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.1e-33 Score=364.45 Aligned_cols=210 Identities=27% Similarity=0.401 Sum_probs=174.9
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++|+||+|.++.. +++.+|+|+|++|+|||.+||+||||||||||+++|+|..+ +.+|+|.+||++.
T Consensus 478 ~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~i 545 (711)
T TIGR00958 478 LIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQ--PTGGQVLLDGVPL 545 (711)
T ss_pred eEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccC--CCCCEEEECCEEH
Confidence 58999999998521 12569999999999999999999999999999999999887 4789999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPL-------TNAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 1004 (1458)
.+ ..+++.++||+|++.++. .|++||+.++. + +.+ ++.+.++++..++.+. .|+.+|..
T Consensus 546 ~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~----~-~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~- 614 (711)
T TIGR00958 546 VQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL----T-DTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEK- 614 (711)
T ss_pred HhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC----C-CCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCC-
Confidence 43 456788999999998875 69999998752 1 222 2346677777776543 46777754
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
..+||||||||++|||||+++|+||+||||||+||+.++..+++ .. ..+++|+|+++|+++ ..+.+|+|++|++
T Consensus 615 G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~- 688 (711)
T TIGR00958 615 GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK- 688 (711)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999998 22 235899999999985 5678999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|+++..|+.
T Consensus 689 G~ive~Gt~ 697 (711)
T TIGR00958 689 GSVVEMGTH 697 (711)
T ss_pred CEEEEeeCH
Confidence 799999985
No 495
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-33 Score=317.44 Aligned_cols=208 Identities=26% Similarity=0.393 Sum_probs=163.0
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~v~~~g~~~~~ 67 (236)
T cd03253 2 EFENVTFAYD------------PGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYD--VSSGSILIDGQDIRE 67 (236)
T ss_pred EEEEEEEEeC------------CCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCEEEECCEEhhh
Confidence 4677776652 12458999999999999999999999999999999999876 478999999987532
Q ss_pred ---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccc-------cccCCCCC
Q 000506 937 ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNA-------MVGLPGVD 1006 (1458)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-------~vg~~~~~ 1006 (1458)
..+++.++|++|++.+++ .||+||+.+... ....+ .+.+.++..++.+..+. ... ..+.
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~----~~~~~~~~~~l~~~~~~l~~~~~~~~~-~~~~ 136 (236)
T cd03253 68 VTLDSLRRAIGVVPQDTVLFN-DTIGYNIRYGRP-----DATDE----EVIEAAKAAQIHDKIMRFPDGYDTIVG-ERGL 136 (236)
T ss_pred CCHHHHHhhEEEECCCChhhc-chHHHHHhhcCC-----CCCHH----HHHHHHHHcCcHHHHHhccccccchhh-cCCC
Confidence 234567999999988775 699999987531 11111 12333444444332211 111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecCcE
Q 000506 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1086 (1458)
Q Consensus 1007 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~gG~ 1086 (1458)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ |+|||+++|++. .+ ..+|++++|++ |+
T Consensus 137 ~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~-~~~d~~~~l~~-g~ 212 (236)
T cd03253 137 KLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLS-TI-VNADKIIVLKD-GR 212 (236)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HH-HhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999876 999999999986 35 45999999986 78
Q ss_pred EEEeCCC
Q 000506 1087 VIYAGPL 1093 (1458)
Q Consensus 1087 ~~~~G~~ 1093 (1458)
+++.|+.
T Consensus 213 i~~~~~~ 219 (236)
T cd03253 213 IVERGTH 219 (236)
T ss_pred EEeeCCH
Confidence 8888764
No 496
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-33 Score=316.94 Aligned_cols=207 Identities=23% Similarity=0.310 Sum_probs=164.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCC--cccEEEECCeecCCc-----cccceEEEecCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLK--LTGKIKYCGHEFKEF-----VPQRTCAYISQNDLH 255 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~--~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 255 (1458)
.++|+|+|+++++||+++|+|+|||||||||++|+|.++++.. .+|+|.++|+++... ..++.++|++|++.+
T Consensus 20 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 99 (259)
T PRK14260 20 SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNP 99 (259)
T ss_pred eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEeccccc
Confidence 4599999999999999999999999999999999999875311 389999999987531 123569999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCc----cccc
Q 000506 256 FGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLD----ICAD 331 (1458)
Q Consensus 256 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 331 (1458)
++ +||+||+.++.+..+.. ++.+. ...++.+++.+|+. +..+
T Consensus 100 ~~-~tv~enl~~~~~~~~~~-------------------~~~~~--------------~~~~~~~l~~~~l~~~l~~~~~ 145 (259)
T PRK14260 100 FP-MSIYENVAYGVRISAKL-------------------PQADL--------------DEIVESALKGAALWQEVKDKLN 145 (259)
T ss_pred CC-ccHHHHHHHHHHHhcCC-------------------CHHHH--------------HHHHHHHHHHcCCcchhhhHhc
Confidence 87 89999998764322100 00000 01123456667763 3445
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccC
Q 000506 332 TMVGDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFD 411 (1458)
Q Consensus 332 t~vg~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 411 (1458)
+.+.+ |||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ + .+++.++|+.+++.+++|
T Consensus 146 ~~~~~-----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~i~~~~d 217 (259)
T PRK14260 146 KSALG-----LSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS--E-LTIAIVTHNMQQATRVSD 217 (259)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcC
Confidence 55544 999999999999999999999999999999999999999999999864 4 456667788899999999
Q ss_pred EEEEEc-----CCeEEEEcChhhHH
Q 000506 412 NIILLS-----EGQIVYQGPREKVL 431 (1458)
Q Consensus 412 ~v~lL~-----~G~iv~~G~~~~~~ 431 (1458)
++++|+ +|+++++|+++++.
T Consensus 218 ~i~~l~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 218 FTAFFSTDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred eEEEEeccCCCCceEEEeCCHHHHh
Confidence 999997 59999999998863
No 497
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=8.9e-33 Score=304.27 Aligned_cols=183 Identities=25% Similarity=0.340 Sum_probs=153.7
Q ss_pred EEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeCCc
Q 000506 857 AFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPKNQ 936 (1458)
Q Consensus 857 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1458)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|.....+.+|+|.+||.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~ 68 (200)
T cd03217 2 EIKDLHVSVG-------------GKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITD 68 (200)
T ss_pred eEEEEEEEeC-------------CEEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCc
Confidence 4677776653 245999999999999999999999999999999999984212478999999998643
Q ss_pred c---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000506 937 A---T-FARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLTNAMVGLPGVDGLSTEQ 1012 (1458)
Q Consensus 937 ~---~-~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1012 (1458)
. . .++.++|++|++.+++..|+++++ +.. ...|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~~~~~~l----------------------------------~~~-----~~~LS~G~ 109 (200)
T cd03217 69 LPPEERARLGIFLAFQYPPEIPGVKNADFL----------------------------------RYV-----NEGFSGGE 109 (200)
T ss_pred CCHHHHhhCcEEEeecChhhccCccHHHHH----------------------------------hhc-----cccCCHHH
Confidence 2 1 234599999999888888888766 000 13699999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHH-hhceEEEEecCcEEEEeC
Q 000506 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE-AFDELLLMKRGGQVIYAG 1091 (1458)
Q Consensus 1013 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~-~~D~vlll~~gG~~~~~G 1091 (1458)
|||++||++|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+ .+|++++|++ |+++..|
T Consensus 110 ~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~-~~~~~~~d~i~~l~~-G~i~~~~ 187 (200)
T cd03217 110 KKRNEILQLLLLEPDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQR-LLDYIKPDRVHVLYD-GRIVKSG 187 (200)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhhCCEEEEEEC-CEEEEEc
Confidence 99999999999999999999999999999999999999999877899999999986 4555 6999999985 7898888
Q ss_pred CC
Q 000506 1092 PL 1093 (1458)
Q Consensus 1092 ~~ 1093 (1458)
+.
T Consensus 188 ~~ 189 (200)
T cd03217 188 DK 189 (200)
T ss_pred cH
Confidence 53
No 498
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-33 Score=330.35 Aligned_cols=211 Identities=24% Similarity=0.375 Sum_probs=179.3
Q ss_pred EEEEeeeeeEeecchhhhhcccccccceecccceeEEeCCeEEEEecCCCCchhHHHhhhcCCcCCCceeeEEEECCeeC
Q 000506 855 SLAFHHVNYSVDMPAEMKAQGIEEDRLQLLRDVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYTEGDISISGYPK 934 (1458)
Q Consensus 855 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1458)
.++++|++++++.+ +.++|+|+|+++++||.+||+|+||||||||+..|+|-.. +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999998642 3469999999999999999999999999999999999876 5799999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------cccccCCC
Q 000506 935 NQ---ATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLSSDIDSKTRKMFVDEVMDLVELEPLT-------NAMVGLPG 1004 (1458)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTV~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~~ 1004 (1458)
.. ..+++.+++++|...++. -|+|+||.++. .+.+ ++.+.++++.+||++.. |+.+|..
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge~- 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PDAS----DEELWAALQQVGLEKLLESAPDGLNTWLGEG- 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CCCC----HHHHHHHHHHcCHHHHHHhChhhhhchhccC-
Confidence 43 346678999999877664 69999998752 2233 34478899999998754 4456644
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEEEEecC
Q 000506 1005 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1084 (1458)
Q Consensus 1005 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq~s~~i~~~~D~vlll~~g 1084 (1458)
.+.||||||||++|||+|++|.++++|||||.|||+.++++|++.|.+-+ +|+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~-~~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA-EGKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh-cCCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 46899999999999999999999999999999999999999999999865 4899999999875 5688999999985
Q ss_pred cEEEEeCCC
Q 000506 1085 GQVIYAGPL 1093 (1458)
Q Consensus 1085 G~~~~~G~~ 1093 (1458)
|+++..|..
T Consensus 548 Gkiie~G~~ 556 (573)
T COG4987 548 GKIIEEGTH 556 (573)
T ss_pred CeeeecCCH
Confidence 799999875
No 499
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=7.5e-33 Score=306.73 Aligned_cols=190 Identities=22% Similarity=0.309 Sum_probs=155.3
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCcc-------ccceEEEecCCCC
Q 000506 182 KIQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFV-------PQRTCAYISQNDL 254 (1458)
Q Consensus 182 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~ 254 (1458)
++++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 10 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~ 86 (206)
T TIGR03608 10 DKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFD---SGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFA 86 (206)
T ss_pred CEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccchhhHHHHHHhCeeEEecchh
Confidence 356999999999999999999999999999999999999987 999999999854221 2457999999999
Q ss_pred CCCCCCHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccc
Q 000506 255 HFGEMTVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMV 334 (1458)
Q Consensus 255 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 334 (1458)
+++.+||+||+.+.....+... .+ ....++.+++.+||++..|+.+
T Consensus 87 ~~~~~t~~e~~~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~ 132 (206)
T TIGR03608 87 LIENETVEENLDLGLKYKKLSK----------KE------------------------KREKKKEALEKVGLNLKLKQKI 132 (206)
T ss_pred hccCCcHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCchhhhcCCh
Confidence 9999999999998643221100 00 0112355788999988888887
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEE
Q 000506 335 GDQMRRGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNII 414 (1458)
Q Consensus 335 g~~~~rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~ 414 (1458)
.+ ||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +.|+++ ++|+.+. .+.+|+++
T Consensus 133 ~~-----lS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~tii~-~sh~~~~-~~~~d~i~ 204 (206)
T TIGR03608 133 YE-----LSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDE-GKTIII-VTHDPEV-AKQADRVI 204 (206)
T ss_pred hh-----CCHHHHHHHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhc-CCEEEE-EeCCHHH-HhhcCEEE
Confidence 66 9999999999999999999999999999999999999999999998753 445544 5565554 46899998
Q ss_pred EE
Q 000506 415 LL 416 (1458)
Q Consensus 415 lL 416 (1458)
+|
T Consensus 205 ~l 206 (206)
T TIGR03608 205 EL 206 (206)
T ss_pred eC
Confidence 75
No 500
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=7.8e-33 Score=353.71 Aligned_cols=209 Identities=22% Similarity=0.401 Sum_probs=168.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCeecCCccc---cceEEEecCCCCCCCCC
Q 000506 183 IQILKDVSGLVKPSRMTLLLGPPGAGKTTLLMALAGKLDDDLKLTGKIKYCGHEFKEFVP---QRTCAYISQNDLHFGEM 259 (1458)
Q Consensus 183 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 259 (1458)
+++|+|+|++|++||.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+|+.
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~- 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFND- 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeecc-
Confidence 46999999999999999999999999999999999999998 9999999999877543 5679999999999975
Q ss_pred CHHHHHHHhhhhccCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHHhhhchhhHHHHHHHHcCCcccccccccCccC
Q 000506 260 TVRETMDFSGRCLGVGTRYEMLAEISRREKEAGIKPDPEIDAYMKATALAGQKTSLATDYVLKLLGLDICADTMVGDQMR 339 (1458)
Q Consensus 260 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 339 (1458)
|++|||.++... . ..++++...++.+.+ +..++ .|++..||.+|+. .
T Consensus 432 Ti~~Ni~~~~~~---~------------------~~~~~i~~al~~~~l---------~~~i~--~lp~Gldt~ig~~-g 478 (582)
T PRK11176 432 TIANNIAYARTE---Q------------------YSREQIEEAARMAYA---------MDFIN--KMDNGLDTVIGEN-G 478 (582)
T ss_pred hHHHHHhcCCCC---C------------------CCHHHHHHHHHHhCc---------HHHHH--hcccccCceeCCC-C
Confidence 999999874210 0 011122222222211 11122 3677889999974 4
Q ss_pred CCCChHHHHHHHHHHHHhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCceEEEEEeCChhHHHhccCEEEEEcCC
Q 000506 340 RGVSGGQKKRVTTGEMLVGPAKVLLMDEISTGLDSSTTFQICKYMKQMVHVLEITTIVSLLQPAPEAYDLFDNIILLSEG 419 (1458)
Q Consensus 340 rGLSGGqkkRvsia~aL~~~p~illLDEPtsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~v~lL~~G 419 (1458)
+.||||||||++|||||+++|++++||||||+||+.+...+.+.|+++.+ ++|+|++. |.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~--~~tvI~Vt-Hr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK--NRTSLVIA-HRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC--CCEEEEEe-cch-HHHHhCCEEEEEECC
Confidence 56999999999999999999999999999999999999999999998753 45665554 443 567789999999999
Q ss_pred eEEEEcChhhHHH
Q 000506 420 QIVYQGPREKVLE 432 (1458)
Q Consensus 420 ~iv~~G~~~~~~~ 432 (1458)
++++.|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999998864
Done!