BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000510
(1456 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/1029 (39%), Positives = 593/1029 (57%), Gaps = 66/1029 (6%)
Query: 1 MAAPDNIIVGSHVWVEDPVLAWINGEVM--WINGQEV-HVNCTNGKKVVTSVSKVFPEDT 57
MAA + + VW+ DP W + E++ + G +V + GK + + P+
Sbjct: 1 MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLD---PKTK 57
Query: 58 EAPA-------GGVDDMTKLSYLHEPGVLQNLATRY-ELNEIYTYTGNILIAVNPFQRLP 109
E P G +D+T LSYLHEP VL NL R+ + IYTY G +L+A+NP+++LP
Sbjct: 58 ELPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP 117
Query: 110 HLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKML 169
+Y ++ Y G G++ PH+FAV + AY+ M + ++ SI+VSGESGAGKT + K
Sbjct: 118 -IYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYA 176
Query: 170 MRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRI 229
MRY A + G S E VE++VL SNP++E+ GNAKT RN+NSSRFGK++EI FDK RI
Sbjct: 177 MRYFATVSG-SASEA-NVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRI 234
Query: 230 SGAAIRTYLLERSRVCQISDPERNYHCFYLLCA-APHEDIAKYKLGSPKSFHYLNQSNCY 288
GA +RTYLLE+SRV ++ ERNYH FY LCA A + +LG+ FHY Q
Sbjct: 235 IGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSP 294
Query: 289 ELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDE 348
+DG+ DA E + TR+A ++GISD Q IFR++A ILHLGN++FA ++ DS I +
Sbjct: 295 VIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPK 353
Query: 349 KSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRL 408
L + +L+ D + + L R + T E + + ++A+ +RDALAK IY+ L
Sbjct: 354 HD--PLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANL 411
Query: 409 FDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFK 468
F+WIV+ +N ++ S IGVLDIYGFE+F+ NSFEQFCIN+ NEKLQQ FN HVFK
Sbjct: 412 FNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFK 471
Query: 469 MEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT 528
+EQEEY +E+I W+ I+F DNQ ++LIE K G++ LLDE C PK + +T++QKL T
Sbjct: 472 LEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNT 530
Query: 529 -FAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAK------ 581
K F KP+LS F I H+A +V YQ FL+KNKD V E +L ++K
Sbjct: 531 HLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLP 590
Query: 582 ----------------------CSFVAGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMET 619
S +G +F+ L LMET
Sbjct: 591 ELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMET 650
Query: 620 LNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNR 679
LNAT PHY+RC+KPN+ P F+ +QQLR GVLE IRIS AG+P+R T+ EF +R
Sbjct: 651 LNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSR 710
Query: 680 FGILA--PEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARRAEVL 735
+ +L +VL D + C+ +L+K L YQ GKTK+F RAGQ+A L+ RA+ L
Sbjct: 711 YRVLMKQKDVLS---DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKL 767
Query: 736 GNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFR 795
A +IQ+ R ++ RK+++ +R AA+ +Q ++RG AR LRR AA+ IQ R
Sbjct: 768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQR 827
Query: 796 AYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQ 855
YV ++ Y +R + + LQ LR + RN++++ R +II Q R A +Y +
Sbjct: 828 MYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTL 887
Query: 856 RAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRL-QIEKRLRGL 914
+AI+ QC +R +A+REL+KLK+ AR ++ LE ++ +L ++ + K + L
Sbjct: 888 KAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSL 947
Query: 915 LQSQ-----TQTADEAKQAFTVSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLES 969
L+ T + + K V + E ++ K+A RV LQ+ + +L +++ ++
Sbjct: 948 LEKMNNLEITYSTETEKLRSDVERLRMSE--EEAKNATNRVLSLQEEIAKLRKELHQTQT 1005
Query: 970 ENQVLRQQA 978
E + + + A
Sbjct: 1006 EKKTIEEWA 1014
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 622 bits (1603), Expect = e-178, Method: Compositional matrix adjust.
Identities = 319/678 (47%), Positives = 456/678 (67%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDIYGFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CQERKA-YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 620 bits (1599), Expect = e-177, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 456/678 (67%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDIYGFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CQERKA-YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + ++ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 619 bits (1595), Expect = e-177, Method: Compositional matrix adjust.
Identities = 318/680 (46%), Positives = 456/680 (67%), Gaps = 15/680 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 277 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 336
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 337 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 392
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 393 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 452
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 453 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 511
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 512 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 571
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 572 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 631
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 632 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 691
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 692 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 751
Query: 714 KTKVFLRAGQMAELDARRAE 733
TK+F RAGQ+A ++ R +
Sbjct: 752 ITKIFFRAGQLARIEEAREQ 771
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 619 bits (1595), Expect = e-177, Method: Compositional matrix adjust.
Identities = 319/688 (46%), Positives = 457/688 (66%), Gaps = 15/688 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSS FGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CSERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARRAEVLGNAARK 741
TK+F RAGQ+A ++ R + LG+ K
Sbjct: 741 ITKIFFRAGQLARIEEAREQRLGSEQTK 768
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 619 bits (1595), Expect = e-177, Method: Compositional matrix adjust.
Identities = 318/680 (46%), Positives = 456/680 (67%), Gaps = 15/680 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 277 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 336
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 337 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 392
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 393 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 452
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 453 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 511
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 512 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 571
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 572 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 631
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 632 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 691
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 692 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 751
Query: 714 KTKVFLRAGQMAELDARRAE 733
TK+F RAGQ+A ++ R +
Sbjct: 752 ITKIFFRAGQLARIEEAREQ 771
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 619 bits (1595), Expect = e-177, Method: Compositional matrix adjust.
Identities = 319/682 (46%), Positives = 457/682 (67%), Gaps = 15/682 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 380
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 381 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 440
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 441 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 499
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 500 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 559
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 560 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 619
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 620 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 679
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 680 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 739
Query: 714 KTKVFLRAGQMAELDARRAEVL 735
TK+F RAGQ+A ++ R + L
Sbjct: 740 ITKIFFRAGQLARIEEAREQRL 761
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 618 bits (1594), Expect = e-177, Method: Compositional matrix adjust.
Identities = 319/682 (46%), Positives = 457/682 (67%), Gaps = 15/682 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 277 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 336
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 337 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 392
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 393 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 452
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 453 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 511
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 512 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 571
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 572 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 631
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 632 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 691
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 692 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 751
Query: 714 KTKVFLRAGQMAELDARRAEVL 735
TK+F RAGQ+A ++ R + L
Sbjct: 752 ITKIFFRAGQLARIEEAREQRL 773
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 618 bits (1594), Expect = e-177, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 455/678 (67%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 618 bits (1594), Expect = e-177, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 455/678 (67%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CQERKA-YFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 618 bits (1593), Expect = e-177, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 455/678 (67%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 618 bits (1593), Expect = e-177, Method: Compositional matrix adjust.
Identities = 319/682 (46%), Positives = 457/682 (67%), Gaps = 15/682 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 277 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 336
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 337 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 392
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 393 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 452
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 453 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 511
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 512 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 571
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 572 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 631
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 632 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 691
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 692 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 751
Query: 714 KTKVFLRAGQMAELDARRAEVL 735
TK+F RAGQ+A ++ R + L
Sbjct: 752 ITKIFFRAGQLARIEEAREQRL 773
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 617 bits (1591), Expect = e-176, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 455/678 (67%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 617 bits (1590), Expect = e-176, Method: Compositional matrix adjust.
Identities = 317/678 (46%), Positives = 455/678 (67%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNN+SRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNASRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 616 bits (1588), Expect = e-176, Method: Compositional matrix adjust.
Identities = 317/678 (46%), Positives = 455/678 (67%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + ++ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 616 bits (1588), Expect = e-176, Method: Compositional matrix adjust.
Identities = 317/678 (46%), Positives = 454/678 (66%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 380
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 381 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 440
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 441 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 499
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 500 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 559
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 560 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 619
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC
Sbjct: 620 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNA 679
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 680 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 739
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 740 ITKIFFRAGQLARIEEAR 757
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 615 bits (1585), Expect = e-176, Method: Compositional matrix adjust.
Identities = 316/678 (46%), Positives = 455/678 (67%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
++ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CEERKA-YFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + ++ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 614 bits (1584), Expect = e-176, Method: Compositional matrix adjust.
Identities = 317/678 (46%), Positives = 454/678 (66%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 380
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 381 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 440
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 441 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 499
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 500 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 559
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 560 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 619
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC
Sbjct: 620 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNV 679
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 680 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 739
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 740 ITKIFFRAGQLARIEEAR 757
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 613 bits (1582), Expect = e-175, Method: Compositional matrix adjust.
Identities = 317/678 (46%), Positives = 453/678 (66%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CSE-RAAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 613 bits (1581), Expect = e-175, Method: Compositional matrix adjust.
Identities = 318/682 (46%), Positives = 455/682 (66%), Gaps = 15/682 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+ +P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIP-IYTQEMVDIFKG 144
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 380
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V KIN +
Sbjct: 381 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVL 440
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 441 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 499
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 500 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 559
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 560 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 619
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 620 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 679
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ +LAP V D Q A +L + + Y+ G
Sbjct: 680 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 739
Query: 714 KTKVFLRAGQMAELDARRAEVL 735
TK+F RAGQ+A ++ R + L
Sbjct: 740 ITKIFFRAGQLARIEEAREQRL 761
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 611 bits (1576), Expect = e-175, Method: Compositional matrix adjust.
Identities = 316/678 (46%), Positives = 452/678 (66%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD E+
Sbjct: 266 SRVVFQSTTERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CSERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAG--XXXXXXXX 595
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 596 XXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
+ +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLEAIRI+ G+P R + +FV R+ LAP V D Q A +L + + ++ G
Sbjct: 681 VLEAIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 609 bits (1571), Expect = e-174, Method: Compositional matrix adjust.
Identities = 316/678 (46%), Positives = 451/678 (66%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD E+
Sbjct: 266 SRVVFQSTTERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEEEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 442 CSERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ LAP V D Q A +L + + ++ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 608 bits (1568), Expect = e-174, Method: Compositional matrix adjust.
Identities = 314/678 (46%), Positives = 451/678 (66%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD E+
Sbjct: 266 SRVVFQSTSERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFK 325
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 381
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQE+Y +E+IN
Sbjct: 442 CSERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKIN 500
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAG--XXXXXXXX 595
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 596 XXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
+ +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 621 AKKGANFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIG 713
VLE IRI+ G+P R + +FV R+ LAP V D Q A +L + + ++ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 604 bits (1557), Expect = e-172, Method: Compositional matrix adjust.
Identities = 340/804 (42%), Positives = 476/804 (59%), Gaps = 58/804 (7%)
Query: 1 MAAPDNIIVGSHVWVEDPVLAWINGEVM--WINGQEV-HVNCTNGKKVVTSVSKVFPEDT 57
MAA + + VW+ DP W + E++ + G +V + GK + + P+
Sbjct: 1 MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLD---PKTK 57
Query: 58 EAPA-------GGVDDMTKLSYLHEPGVLQNLATRY-ELNEIYTYTGNILIAVNPFQRLP 109
E P G +D+T LSYLHEP VL NL R+ + IYTY G +L+A+NP+++LP
Sbjct: 58 ELPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP 117
Query: 110 HLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKML 169
+Y ++ Y G G++ PH+FAV + AY+ M + ++ SI+VSGESGAGKT + K
Sbjct: 118 -IYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYA 176
Query: 170 MRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRI 229
MRY A + G S E VE++VL SNP++E+ GNAKT RN+NSSRFGK++EI FDK RI
Sbjct: 177 MRYFATVSG-SASEA-NVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRI 234
Query: 230 SGAAIRTYLLERSRVCQISDPERNYHCFYLLCA-APHEDIAKYKLGSPKSFHYLNQSNCY 288
GA +RTYLLE+SRV ++ ERNYH FY LCA A + +LG+ FHY Q
Sbjct: 235 IGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSP 294
Query: 289 ELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDE 348
+DG+ DA E + TR+A ++GISD Q IFR++A ILHLGN++FA ++ DS I +
Sbjct: 295 VIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPK 353
Query: 349 KSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRL 408
L + +L+ D + + L R + T E + + ++A+ +RDALAK IY+ L
Sbjct: 354 HDP--LTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANL 411
Query: 409 FDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFK 468
F+WIV+ +N ++ S IGVLDIYGFE+F+ NSFEQFCIN+ NEKLQQ FN HVFK
Sbjct: 412 FNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFK 471
Query: 469 MEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT 528
+EQEEY +E+I W+ I+F DNQ ++LIE K G++ LLDE C PK + +T++QKL T
Sbjct: 472 LEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNT 530
Query: 529 -FAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAK------ 581
K F KP+LS F I H+A +V YQ FL+KNKD V E +L ++K
Sbjct: 531 HLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLP 590
Query: 582 ----------------------CSFVAGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMET 619
S +G +F+ L LMET
Sbjct: 591 ELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMET 650
Query: 620 LNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNR 679
LNAT PHY+RC+KPN+ P F+ +QQLR GVLE IRIS AG+P+R T+ EF +R
Sbjct: 651 LNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSR 710
Query: 680 FGILA--PEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARRAEVL 735
+ +L +VL D + C+ +L+K L YQ GKTK+F RAGQ+A L+ RA+ L
Sbjct: 711 YRVLMKQKDVLS---DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKL 767
Query: 736 GNAARKIQRQTRTYIARKEFILLR 759
A +IQ+ R ++ RK+++ +R
Sbjct: 768 RAACIRIQKTIRGWLMRKKYMRMR 791
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 588 bits (1516), Expect = e-168, Method: Compositional matrix adjust.
Identities = 332/778 (42%), Positives = 460/778 (59%), Gaps = 58/778 (7%)
Query: 1 MAAPDNIIVGSHVWVEDPVLAWINGEVM--WINGQEV-HVNCTNGKKVVTSVSKVFPEDT 57
MAA + + VW+ DP W + E++ + G +V + GK + + P+
Sbjct: 1 MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLD---PKTK 57
Query: 58 EAPA-------GGVDDMTKLSYLHEPGVLQNLATRY-ELNEIYTYTGNILIAVNPFQRLP 109
E P G +D+T LSYLHEP VL NL R+ + IYTY G +L+A+NP+++LP
Sbjct: 58 ELPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP 117
Query: 110 HLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKML 169
+Y ++ Y G G++ PH+FAV + AY+ M + ++ SI+VSGESGAGKT + K
Sbjct: 118 -IYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYA 176
Query: 170 MRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRI 229
MRY A + G S E VE++VL SNP++E+ GNAKT RN+NSSRFGK++EI FDK RI
Sbjct: 177 MRYFATVSG-SASEA-NVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRI 234
Query: 230 SGAAIRTYLLERSRVCQISDPERNYHCFYLLCA-APHEDIAKYKLGSPKSFHYLNQSNCY 288
GA +RTYLLE+SRV ++ ERNYH FY LCA A + +LG+ FHY Q
Sbjct: 235 IGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSP 294
Query: 289 ELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDE 348
+DG+ DA E + TR+A ++GISD Q IFR++A ILHLGN++FA ++ DS I +
Sbjct: 295 VIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPK 353
Query: 349 KSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRL 408
L + +L+ D + + L R + T E + + ++A+ +RDALAK IY+ L
Sbjct: 354 HDP--LTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANL 411
Query: 409 FDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFK 468
F+WIV+ +N ++ S IGVLDIYGFE+F+ NSFEQFCIN+ NEKLQQ FN HVFK
Sbjct: 412 FNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFK 471
Query: 469 MEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT 528
+EQEEY +E+I W+ I+F DNQ ++LIE K G++ LLDE C PK + +T++QKL T
Sbjct: 472 LEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNT 530
Query: 529 -FAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAK------ 581
K F KP+LS F I H+A +V YQ FL+KNKD V E +L ++K
Sbjct: 531 HLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLP 590
Query: 582 ----------------------CSFVAGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMET 619
S +G +F+ L LMET
Sbjct: 591 ELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMET 650
Query: 620 LNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNR 679
LNAT PHY+RC+KPN+ P F+ +QQLR GVLE IRIS AG+P+R T+ EF +R
Sbjct: 651 LNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSR 710
Query: 680 FGILA--PEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARRAE 733
+ +L +VL D + C+ +L+K L YQ GKTK+F RAGQ+A L+ RA+
Sbjct: 711 YRVLMKQKDVLS---DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRAD 765
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 583 bits (1503), Expect = e-166, Method: Compositional matrix adjust.
Identities = 296/613 (48%), Positives = 421/613 (68%), Gaps = 13/613 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+R+P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 380
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V+KIN +
Sbjct: 381 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 440
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDIYGFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 441 CQERKA-YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 499
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 500 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 559
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 560 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 619
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 620 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 679
Query: 656 VLEAIRISCAGYP 668
VLE IRI+ G+P
Sbjct: 680 VLEGIRITRKGFP 692
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 577 bits (1487), Expect = e-164, Method: Compositional matrix adjust.
Identities = 295/615 (47%), Positives = 419/615 (68%), Gaps = 13/615 (2%)
Query: 63 GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V NL RY + IYTY+G L+AVNPF+ +P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIP-IYTQEMVDIFKG 144
Query: 123 AAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E++PH+FA+ D AYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 242 SRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
SRV S+ ERNYH FY LL A E+ L P+SF+YLNQS C ++ GVSD+ E+
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
TR+AMDIVG S +EQ +IF+++A ILHLGNI F KG + +V+KD+ + LN + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTV 380
Query: 361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
+ LE AL++ ++ +++ + L+ + +SRDAL K +Y RLF W+V KIN +
Sbjct: 381 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVL 440
Query: 421 GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
Q+ + IGVLDI GFE FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 441 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 499
Query: 481 WSYIEF-IDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL F+K N ++ +
Sbjct: 500 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 559
Query: 538 PKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXX 597
P+ S+T+F + HYAG+V Y+ +L+KNKD + + + + + V
Sbjct: 560 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 619
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 655
I +++K QL SLM TL T PH++RC+ PNN P+ E+ V+ QLRC G
Sbjct: 620 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 679
Query: 656 VLEAIRISCAGYPTR 670
VLE IRI+ G+P R
Sbjct: 680 VLEGIRITRKGFPNR 694
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 513 bits (1320), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/745 (38%), Positives = 416/745 (55%), Gaps = 33/745 (4%)
Query: 10 GSHVWVEDPVLAWINGEVMWINGQEVHVNCTN--GKKVVTSVSKVFPEDTEAPAGGVDDM 67
G VW P + G ++ I + + N GK + +++VFP + E V+D
Sbjct: 4 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 62
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
L YL+E +L N+ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G + G
Sbjct: 63 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 122
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFA+ D A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 123 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 178
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQI 247
+ +++E+NP+LEAFGNAKTVRNNNSSRFGKFVEI F++ + G + YLLE+SR+C
Sbjct: 179 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 238
Query: 248 SDPERNYHCFYLLCAAPHEDI-AKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAM 306
ERNYH FY LCA EDI + L SP +F YLN+ + + D +++ AM
Sbjct: 239 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAM 298
Query: 307 DIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQ 366
+G+ D+E+ +FRVVA +LHLGNIDF + KS L AELL D
Sbjct: 299 KKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQD 358
Query: 367 SLEDALIKRVMVTPE-----EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIG 421
L +L RVM+T VI L A +RDALAKT+YS LFD +V ++N
Sbjct: 359 DLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFP 418
Query: 422 QDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINW 481
+ S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y +E +
Sbjct: 419 FET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGV 477
Query: 482 SYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLS 541
+ + ++DNQD +DLIE + GI+ +LDE P+ + + F+ + Q + R S P+ S
Sbjct: 478 NEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKS 537
Query: 542 --------RTD--FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV------ 585
R D F I H+AG V Y+ F++KN D + ++L+ ++ F+
Sbjct: 538 KLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFES 597
Query: 586 AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENF 645
+ +G++FK QL L++ L +T +IRC+KPN + FE
Sbjct: 598 STNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGA 657
Query: 646 NVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKK 705
++ QL+C G++ + + G+P+R +F+E N + P+ L D ++ C+ +
Sbjct: 658 QILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKAL 716
Query: 706 GLK--GYQIGKTKVFLRAGQMAELD 728
GL Y+ G TKVF R G+ AE D
Sbjct: 717 GLNEIDYKFGLTKVFFRPGKFAEFD 741
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 512 bits (1319), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/745 (38%), Positives = 416/745 (55%), Gaps = 33/745 (4%)
Query: 10 GSHVWVEDPVLAWINGEVMWINGQEVHVNCTN--GKKVVTSVSKVFPEDTEAPAGGVDDM 67
G VW P + G ++ I + + N GK + +++VFP + E V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 61
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
L YL+E +L N+ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G + G
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFA+ D A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 177
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQI 247
+ +++E+NP+LEAFGNAKTVRNNNSSRFGKFVEI F++ + G + YLLE+SR+C
Sbjct: 178 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYLLCAAPHEDI-AKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAM 306
ERNYH FY LCA EDI + L SP +F YLN+ + + D +++ AM
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAM 297
Query: 307 DIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQ 366
+G+ D+E+ +FRVVA +LHLGNIDF + KS L AELL D
Sbjct: 298 KKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQD 357
Query: 367 SLEDALIKRVMVTPE-----EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIG 421
L +L RVM+T VI L A +RDALAKT+YS LFD +V ++N
Sbjct: 358 DLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFP 417
Query: 422 QDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINW 481
+ S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y +E +
Sbjct: 418 FET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGV 476
Query: 482 SYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLS 541
+ + ++DNQD +DLIE + GI+ +LDE P+ + + F+ + Q + R S P+ S
Sbjct: 477 NEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKS 536
Query: 542 --------RTD--FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV------ 585
R D F I H+AG V Y+ F++KN D + ++L+ ++ F+
Sbjct: 537 KLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFES 596
Query: 586 AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENF 645
+ +G++FK QL L++ L +T +IRC+KPN + FE
Sbjct: 597 STNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGA 656
Query: 646 NVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKK 705
++ QL+C G++ + + G+P+R +F+E N + P+ L D ++ C+ +
Sbjct: 657 QILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKAL 715
Query: 706 GLK--GYQIGKTKVFLRAGQMAELD 728
GL Y+ G TKVF R G+ AE D
Sbjct: 716 GLNEIDYKFGLTKVFFRPGKFAEFD 740
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 511 bits (1316), Expect = e-144, Method: Compositional matrix adjust.
Identities = 289/745 (38%), Positives = 415/745 (55%), Gaps = 33/745 (4%)
Query: 10 GSHVWVEDPVLAWINGEVMWINGQEVHVNCTN--GKKVVTSVSKVFPEDTEAPAGGVDDM 67
G VW P + G ++ I + + N GK + +++VFP + E V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 61
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
L YL+E +L N+ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G + G
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFA+ D A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 177
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQI 247
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVEI F++ + G + YLLE+SR+C
Sbjct: 178 YDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYLLCAAPHEDI-AKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAM 306
ERNYH FY LCA EDI + L SP +F YLN+ + + D +++ AM
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAM 297
Query: 307 DIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQ 366
+G+ D+E+ +FRVVA +LHLGNIDF + KS L AELL D
Sbjct: 298 KKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQD 357
Query: 367 SLEDALIKRVMVTPE-----EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIG 421
L +L RVM+T VI L A +RDALAKT+YS LFD +V ++N
Sbjct: 358 DLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFP 417
Query: 422 QDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINW 481
+ S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y +E +
Sbjct: 418 FET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGV 476
Query: 482 SYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLS 541
+ + ++DNQD +DLIE + GI+ +LDE P+ + + F+ + Q + R S P+ S
Sbjct: 477 NEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKS 536
Query: 542 --------RTD--FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV------ 585
R D F I H+AG V Y+ F++KN D + ++L+ ++ F+
Sbjct: 537 KLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFES 596
Query: 586 AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENF 645
+ +G++FK QL L++ L +T +IRC+KPN + FE
Sbjct: 597 STNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGA 656
Query: 646 NVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKK 705
++ QL+C G++ + + G+P+R +F+E N + P+ L D ++ C+ +
Sbjct: 657 QILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKAL 715
Query: 706 GLK--GYQIGKTKVFLRAGQMAELD 728
GL Y+ G TKVF R G+ AE D
Sbjct: 716 GLNEIDYKFGLTKVFFRPGKFAEFD 740
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 509 bits (1310), Expect = e-144, Method: Compositional matrix adjust.
Identities = 299/794 (37%), Positives = 441/794 (55%), Gaps = 48/794 (6%)
Query: 12 HVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVT----SVSKVFPEDTEAPAGGVDDM 67
+ WV D + + E+ G E+ V T + + P E ++DM
Sbjct: 33 NCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEK----LEDM 88
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
++YL+E VL NL +RY IYTY+G IAVNP++RLP +Y ++ +Y+G E
Sbjct: 89 ANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTE 147
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG---------G 178
+ PH+F+V D AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 148 IPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEA 207
Query: 179 RSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYL 238
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYL
Sbjct: 208 SDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 266
Query: 239 LERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDA 296
LE+SRV ERNYH FY +C+ ++ L +P S + ++NQ C +D + D
Sbjct: 267 LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDV 325
Query: 297 HEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNM 356
E+ A DI+G + +E++++F+ A+ILH+G + F + + + +
Sbjct: 326 EEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEK 382
Query: 357 TAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKI 416
A L +A L AL+K + E++T+ + V S ALAK++Y R+F+W+V ++
Sbjct: 383 VAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRV 442
Query: 417 NISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTR 476
N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +
Sbjct: 443 NKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKK 502
Query: 477 EEINWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNR 534
E I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KL Q KN
Sbjct: 503 EGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRM 561
Query: 535 FSKP-KLSRTD-----FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGX 588
F+KP K +R + F + HYAG V Y +L+KNKD + ALL A+K VA
Sbjct: 562 FTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAEL 621
Query: 589 XXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNATAPHYIRCVKPNNVLKPSI 641
S F+ L LM+ L +T PH++RC+ PN + +P +
Sbjct: 622 FKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGL 681
Query: 642 FENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQM 700
+ V+ QL+C GVLE IRI G+P+R + EF R+ ILAP + +G D + +
Sbjct: 682 VDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEK 741
Query: 701 ILDKKGLK----GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFI 756
IL GL+ Y++G TKVF +AG + L+ R E L Q R Y+ RK +
Sbjct: 742 IL--AGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYK 799
Query: 757 LLRNAAVILQSFLR 770
L++ + L R
Sbjct: 800 KLQDQRIGLSVIQR 813
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 508 bits (1308), Expect = e-143, Method: Compositional matrix adjust.
Identities = 299/794 (37%), Positives = 441/794 (55%), Gaps = 48/794 (6%)
Query: 12 HVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVT----SVSKVFPEDTEAPAGGVDDM 67
+ WV D + + E+ G E+ V T + + P E ++DM
Sbjct: 33 NCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEK----LEDM 88
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
++YL+E VL NL +RY IYTY+G IAVNP++RLP +Y ++ +Y+G E
Sbjct: 89 ANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTE 147
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG---------G 178
+ PH+F+V D AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 148 IPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEA 207
Query: 179 RSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYL 238
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYL
Sbjct: 208 SDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 266
Query: 239 LERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDA 296
LE+SRV ERNYH FY +C+ ++ L +P S + ++NQ C +D + D
Sbjct: 267 LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDV 325
Query: 297 HEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNM 356
E+ A DI+G + +E++++F+ A+ILH+G + F + + + +
Sbjct: 326 EEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEK 382
Query: 357 TAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKI 416
A L +A L AL+K + E++T+ + V S ALAK++Y R+F+W+V ++
Sbjct: 383 VAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRV 442
Query: 417 NISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTR 476
N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +
Sbjct: 443 NKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKK 502
Query: 477 EEINWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNR 534
E I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KL Q KN
Sbjct: 503 EGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRM 561
Query: 535 FSKP-KLSRTD-----FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGX 588
F+KP K +R + F + HYAG V Y +L+KNKD + ALL A+K VA
Sbjct: 562 FTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAEL 621
Query: 589 XXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNATAPHYIRCVKPNNVLKPSI 641
S F+ L LM+ L +T PH++RC+ PN + +P +
Sbjct: 622 FKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGL 681
Query: 642 FENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQM 700
+ V+ QL+C GVLE IRI G+P+R + EF R+ ILAP + +G D + +
Sbjct: 682 VDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEK 741
Query: 701 ILDKKGLK----GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFI 756
IL GL+ Y++G TKVF +AG + L+ R E L Q R Y+ RK +
Sbjct: 742 IL--AGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYK 799
Query: 757 LLRNAAVILQSFLR 770
L++ + L R
Sbjct: 800 KLQDQRIGLSVIQR 813
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 299/794 (37%), Positives = 441/794 (55%), Gaps = 48/794 (6%)
Query: 12 HVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVT----SVSKVFPEDTEAPAGGVDDM 67
+ WV D + + E+ G E+ V T + + P E ++DM
Sbjct: 28 NCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEK----LEDM 83
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
++YL+E VL NL +RY IYTY+G IAVNP++RLP +Y ++ +Y+G E
Sbjct: 84 ANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTE 142
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG---------G 178
+ PH+F+V D AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 143 IPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEA 202
Query: 179 RSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYL 238
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYL
Sbjct: 203 SDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 261
Query: 239 LERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDA 296
LE+SRV ERNYH FY +C+ ++ L +P S + ++NQ C +D + D
Sbjct: 262 LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDV 320
Query: 297 HEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNM 356
E+ A DI+G + +E++++F+ A+ILH+G + F + + + +
Sbjct: 321 EEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEK 377
Query: 357 TAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKI 416
A L +A L AL+K + E++T+ + V S ALAK++Y R+F+W+V ++
Sbjct: 378 VAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRV 437
Query: 417 NISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTR 476
N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +
Sbjct: 438 NKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKK 497
Query: 477 EEINWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNR 534
E I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KL Q KN
Sbjct: 498 EGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRM 556
Query: 535 FSKP-KLSRTD-----FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGX 588
F+KP K +R + F + HYAG V Y +L+KNKD + ALL A+K VA
Sbjct: 557 FTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAEL 616
Query: 589 XXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNATAPHYIRCVKPNNVLKPSI 641
S F+ L LM+ L +T PH++RC+ PN + +P +
Sbjct: 617 FKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGL 676
Query: 642 FENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQM 700
+ V+ QL+C GVLE IRI G+P+R + EF R+ ILAP + +G D + +
Sbjct: 677 VDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEK 736
Query: 701 ILDKKGLK----GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFI 756
IL GL+ Y++G TKVF +AG + L+ R E L Q R Y+ RK +
Sbjct: 737 IL--AGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYK 794
Query: 757 LLRNAAVILQSFLR 770
L++ + L R
Sbjct: 795 KLQDQRIGLSVIQR 808
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 299/794 (37%), Positives = 441/794 (55%), Gaps = 48/794 (6%)
Query: 12 HVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVT----SVSKVFPEDTEAPAGGVDDM 67
+ WV D + + E+ G E+ V T + + P E ++DM
Sbjct: 33 NCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEK----LEDM 88
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
++YL+E VL NL +RY IYTY+G IAVNP++RLP +Y ++ +Y+G E
Sbjct: 89 ANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTE 147
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG---------G 178
+ PH+F+V D AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 148 IPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEA 207
Query: 179 RSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYL 238
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYL
Sbjct: 208 SDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 266
Query: 239 LERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDA 296
LE+SRV ERNYH FY +C+ ++ L +P S + ++NQ C +D + D
Sbjct: 267 LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDV 325
Query: 297 HEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNM 356
E+ A DI+G + +E++++F+ A+ILH+G + F + + + +
Sbjct: 326 EEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEK 382
Query: 357 TAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKI 416
A L +A L AL+K + E++T+ + V S ALAK++Y R+F+W+V ++
Sbjct: 383 VAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRV 442
Query: 417 NISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTR 476
N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +
Sbjct: 443 NKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKK 502
Query: 477 EEINWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNR 534
E I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KL Q KN
Sbjct: 503 EGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRM 561
Query: 535 FSKP-KLSRTD-----FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGX 588
F+KP K +R + F + HYAG V Y +L+KNKD + ALL A+K VA
Sbjct: 562 FTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAEL 621
Query: 589 XXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNATAPHYIRCVKPNNVLKPSI 641
S F+ L LM+ L +T PH++RC+ PN + +P +
Sbjct: 622 FKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGL 681
Query: 642 FENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQM 700
+ V+ QL+C GVLE IRI G+P+R + EF R+ ILAP + +G D + +
Sbjct: 682 VDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEK 741
Query: 701 ILDKKGLK----GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFI 756
IL GL+ Y++G TKVF +AG + L+ R E L Q R Y+ RK +
Sbjct: 742 IL--AGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYK 799
Query: 757 LLRNAAVILQSFLR 770
L++ + L R
Sbjct: 800 KLQDQRIGLSVIQR 813
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 507 bits (1306), Expect = e-143, Method: Compositional matrix adjust.
Identities = 299/794 (37%), Positives = 441/794 (55%), Gaps = 48/794 (6%)
Query: 12 HVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVT----SVSKVFPEDTEAPAGGVDDM 67
+ WV D + + E+ G E+ V T + + P E ++DM
Sbjct: 29 NCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEK----LEDM 84
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
++YL+E VL NL +RY IYTY+G IAVNP++RLP +Y ++ +Y+G E
Sbjct: 85 ANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTE 143
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG---------G 178
+ PH+F+V D AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 144 IPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEA 203
Query: 179 RSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYL 238
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYL
Sbjct: 204 SDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 262
Query: 239 LERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDA 296
LE+SRV ERNYH FY +C+ ++ L +P S + ++NQ C +D + D
Sbjct: 263 LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDV 321
Query: 297 HEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNM 356
E+ A DI+G + +E++++F+ A+ILH+G + F + + + +
Sbjct: 322 EEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEK 378
Query: 357 TAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKI 416
A L +A L AL+K + E++T+ + V S ALAK++Y R+F+W+V ++
Sbjct: 379 VAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRV 438
Query: 417 NISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTR 476
N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +
Sbjct: 439 NKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKK 498
Query: 477 EEINWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNR 534
E I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KL Q KN
Sbjct: 499 EGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRM 557
Query: 535 FSKP-KLSRTD-----FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGX 588
F+KP K +R + F + HYAG V Y +L+KNKD + ALL A+K VA
Sbjct: 558 FTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAEL 617
Query: 589 XXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNATAPHYIRCVKPNNVLKPSI 641
S F+ L LM+ L +T PH++RC+ PN + +P +
Sbjct: 618 FKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGL 677
Query: 642 FENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQM 700
+ V+ QL+C GVLE IRI G+P+R + EF R+ ILAP + +G D + +
Sbjct: 678 VDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEK 737
Query: 701 ILDKKGLK----GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFI 756
IL GL+ Y++G TKVF +AG + L+ R E L Q R Y+ RK +
Sbjct: 738 IL--AGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYK 795
Query: 757 LLRNAAVILQSFLR 770
L++ + L R
Sbjct: 796 KLQDQRIGLSVIQR 809
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 503 bits (1294), Expect = e-142, Method: Compositional matrix adjust.
Identities = 290/771 (37%), Positives = 418/771 (54%), Gaps = 59/771 (7%)
Query: 10 GSHVWVEDPVLAWINGEVMWINGQEVHVNCTN--GKKVVTSVSKVFPEDTEAPAGGVDDM 67
G VW P + G ++ I + + N GK + +++VFP + E V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 61
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
L YL+E +L N+ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G + G
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFA+ D A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 177
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQI 247
+ +++E+NP+LEAFGNAKTVRNNNSSRFGKFVEI F++ + G + YLLE+SR+C
Sbjct: 178 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYLLCAAPHEDI-AKYKLGSPKSFHYLN----------------------- 283
ERNYH FY LCA EDI + L SP +F YLN
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSP 297
Query: 284 ---QSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEI 340
++ + G+ D +++ AM +G+ D+E+ +FRVVA +LHLGNIDF +
Sbjct: 298 EYLKAGSLKDPGLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST 357
Query: 341 DSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVA 395
KS L AELL D L +L RVM+T VI L A
Sbjct: 358 SGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANN 417
Query: 396 SRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTN 455
+RDALAKT+YS LFD +V ++N + S IGVLDI GFE F+ NSFEQFCIN+ N
Sbjct: 418 ARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCN 476
Query: 456 EKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPK 515
EKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+
Sbjct: 477 EKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 536
Query: 516 STHETFSQKLCQTFAKNNRFSKPKLS--------RTD--FTILHYAGEVTYQANHFLDKN 565
+ + F+ + Q + R S P+ S R D F I H+AG V Y+ F++KN
Sbjct: 537 PSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKN 596
Query: 566 KDYVVAEHQALLTAAKCSFV------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMET 619
D + ++L+ ++ F+ + +G++FK QL L++
Sbjct: 597 NDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDK 656
Query: 620 LNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNR 679
L +T +IRC+KPN + FE ++ QL+C G++ + + G+P+R +F+E N
Sbjct: 657 LRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNM 716
Query: 680 FGILAPEVLEGNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELD 728
+ P+ L D ++ C+ + GL Y+ G TKVF R G+ AE D
Sbjct: 717 YKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 294/795 (36%), Positives = 437/795 (54%), Gaps = 48/795 (6%)
Query: 12 HVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVT----SVSKVFPEDTEAPAGGVDDM 67
+ WV DP + + E+ G+E+ V + T + ++ P E ++DM
Sbjct: 33 NCWVPDPKEGFASAEIQSSKGEEITVKIVSDNSTRTVKKDDIQQMNPPKFEK----LEDM 88
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
++YL+E VL NL RY IYTY+G IAVNP++RLP +Y ++ +Y+G E
Sbjct: 89 ANMTYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTE 147
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGR-------- 179
+ PH+F+V D AY+ M+ + ++ S L++GESGAGKTE+TK ++ Y A +
Sbjct: 148 IPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTESTKKVIMYFARVAANLYKQKEEP 207
Query: 180 -SGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYL 238
+ +E Q++E+NPVLEAFGNAKTVRNNNSSRFGKF+ I F G+I+GA I TYL
Sbjct: 208 VPNLRASNLEDQIIEANPVLEAFGNAKTVRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 267
Query: 239 LERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDA 296
LE+SRV ERNYH FY +C+ ++ + L +P S + ++NQ C +D + D
Sbjct: 268 LEKSRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDNIDDV 326
Query: 297 HEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNM 356
E+ A DI+G + +E+ ++F+ A+ILH+G + F + + + +
Sbjct: 327 EEFKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEK 383
Query: 357 TAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKI 416
A L +A L AL+K + E++T+ + + S AL+K++Y R+F+W+V+++
Sbjct: 384 VAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRV 443
Query: 417 NISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTR 476
N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +
Sbjct: 444 NRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKK 503
Query: 477 EEINWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNR 534
E I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F Q KN
Sbjct: 504 EGIQWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIGKNRM 562
Query: 535 FSKP-KLSRTD-----FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVA-- 586
F+KP K +R + F + HYAG V Y +LDKNKD + +LL +K VA
Sbjct: 563 FTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAEL 622
Query: 587 ------GXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPS 640
I + + L LM L T PH++RC+ PN P
Sbjct: 623 FRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMCNLRRTNPHFVRCIIPNLEKDPG 682
Query: 641 IFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQ 699
+ + V+ QL+C GVLE IRI G+P+R + EF R+ ILAP + +G D + +
Sbjct: 683 LVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSE 742
Query: 700 MILDKKGLK----GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEF 755
IL GL+ Y++G TKVF +AG + L+ R E L Q R Y+ RK +
Sbjct: 743 KIL--TGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAY 800
Query: 756 ILLRNAAVILQSFLR 770
L++ + L R
Sbjct: 801 KKLQDQRIGLSVIQR 815
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 501 bits (1291), Expect = e-141, Method: Compositional matrix adjust.
Identities = 294/798 (36%), Positives = 443/798 (55%), Gaps = 53/798 (6%)
Query: 12 HVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVT----SVSKVFPEDTEAPAGGVDDM 67
+ WV DP + + E+ G+E+ V + T + ++ P E ++DM
Sbjct: 33 NCWVPDPKEGFASAEIQSSKGEEITVKIVSDNSTRTVKKDDIQQMNPPKFEK----LEDM 88
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
++YL+E VL NL RY IYTY+G IAVNP++RLP +Y ++ +Y+G E
Sbjct: 89 ANMTYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTE 147
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT- 186
+ PH+F+V D AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA + V+ +T
Sbjct: 148 IPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVA--CAVKKKTS 205
Query: 187 -----------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIR 235
+E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I
Sbjct: 206 EEEEADQKKGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIE 265
Query: 236 TYLLERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGV 293
TYLLE+SRV ERNYH FY +C+ ++ + L +P S + ++NQ C +D +
Sbjct: 266 TYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDNI 324
Query: 294 SDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFH 353
D E+ A DI+G + +E+ ++F+ A+ILH+G + F + + + +
Sbjct: 325 DDVEEFKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAE 381
Query: 354 LNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIV 413
A L +A L AL+K + E++T+ + + S AL+K++Y R+F+W+V
Sbjct: 382 AEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLV 441
Query: 414 EKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEE 473
+++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEE
Sbjct: 442 KRVNRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEE 501
Query: 474 YTREEINWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAK 531
Y +E I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F Q K
Sbjct: 502 YKKEGIQWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIGK 560
Query: 532 NNRFSKP-KLSRTD-----FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV 585
N F+KP K +R + F + HYAG V Y +LDKNKD + +LL +K V
Sbjct: 561 NRMFTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLV 620
Query: 586 A--------GXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVL 637
A I + + L LM+ L +T PH++RC+ PN +
Sbjct: 621 AELFRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELK 680
Query: 638 KPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQV 696
+P + + V+ QL+C GVLE IRI G+P+R + EF R+ ILAP + +G D +
Sbjct: 681 QPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKT 740
Query: 697 ACQMILDKKGLK----GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIAR 752
+ IL GL+ Y++G TKVF +AG + L+ R E L Q R Y+ R
Sbjct: 741 VSEKIL--TGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIR 798
Query: 753 KEFILLRNAAVILQSFLR 770
K + L++ + L R
Sbjct: 799 KAYKKLQDQRIGLSVIQR 816
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 501 bits (1289), Expect = e-141, Method: Compositional matrix adjust.
Identities = 292/772 (37%), Positives = 418/772 (54%), Gaps = 61/772 (7%)
Query: 10 GSHVWVEDPVLAWINGEVMWINGQEVHVNCTN--GKKVVTSVSKVFPEDTEAPAGGVDDM 67
G VW P + G ++ I + + N GK + +++VFP + E V+D
Sbjct: 4 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 62
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
L YL+E +L N+ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G + G
Sbjct: 63 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 122
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFA+ D A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 123 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 178
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQI 247
+ +++E+NP+LEAFGNAKTVRNNNSSRFGKFVEI F++ + G + YLLE+SR+C
Sbjct: 179 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 238
Query: 248 SDPERNYHCFYLLCAAPHEDI-AKYKLGSPKSFHYLNQSNCYEL---------------- 290
ERNYH FY LCA EDI + L SP +F YLN+ C
Sbjct: 239 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKS 297
Query: 291 ----------DGVSDAH-EYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKE 339
D + D H +++ AM +G+ D+E+ +FRVVA +LHLGNIDF +
Sbjct: 298 PEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGS 357
Query: 340 IDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAV 394
KS L AELL D L +L RVM+T VI L A
Sbjct: 358 TSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQAN 417
Query: 395 ASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFT 454
+RDALAKT+YS LFD +V ++N + S IGVLDI GFE F+ NSFEQFCIN+
Sbjct: 418 NARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYC 476
Query: 455 NEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFP 514
NEKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P
Sbjct: 477 NEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLP 536
Query: 515 KSTHETFSQKLCQTFAKNNRFSKPKLS--------RTD--FTILHYAGEVTYQANHFLDK 564
+ + + F+ + Q + R S P+ S R D F I H+AG V Y+ F++K
Sbjct: 537 QPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEK 596
Query: 565 NKDYVVAEHQALLTAAKCSFV------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLME 618
N D + ++L+ ++ F+ + +G++FK QL L++
Sbjct: 597 NNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLD 656
Query: 619 TLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVN 678
L +T +IRC+KPN + FE ++ QL+C G++ + + G+P+R +F+E N
Sbjct: 657 KLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYN 716
Query: 679 RFGILAPEVLEGNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELD 728
+ P+ L D ++ C+ + GL Y+ G TKVF R G+ AE D
Sbjct: 717 MYKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 767
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 292/772 (37%), Positives = 418/772 (54%), Gaps = 61/772 (7%)
Query: 10 GSHVWVEDPVLAWINGEVMWINGQEVHVNCTN--GKKVVTSVSKVFPEDTEAPAGGVDDM 67
G VW P + G ++ I + + N GK + +++VFP + E V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 61
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
L YL+E +L N+ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G + G
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFA+ D A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 177
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQI 247
+ +++E+NP+LEAFGNAKTVRNNNSSRFGKFVEI F++ + G + YLLE+SR+C
Sbjct: 178 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYLLCAAPHEDI-AKYKLGSPKSFHYLNQSNCYEL---------------- 290
ERNYH FY LCA EDI + L SP +F YLN+ C
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKS 296
Query: 291 ----------DGVSDAH-EYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKE 339
D + D H +++ AM +G+ D+E+ +FRVVA +LHLGNIDF +
Sbjct: 297 PEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGS 356
Query: 340 IDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAV 394
KS L AELL D L +L RVM+T VI L A
Sbjct: 357 TSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQAN 416
Query: 395 ASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFT 454
+RDALAKT+YS LFD +V ++N + S IGVLDI GFE F+ NSFEQFCIN+
Sbjct: 417 NARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYC 475
Query: 455 NEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFP 514
NEKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P
Sbjct: 476 NEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLP 535
Query: 515 KSTHETFSQKLCQTFAKNNRFSKPKLS--------RTD--FTILHYAGEVTYQANHFLDK 564
+ + + F+ + Q + R S P+ S R D F I H+AG V Y+ F++K
Sbjct: 536 QPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEK 595
Query: 565 NKDYVVAEHQALLTAAKCSFV------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLME 618
N D + ++L+ ++ F+ + +G++FK QL L++
Sbjct: 596 NNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLD 655
Query: 619 TLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVN 678
L +T +IRC+KPN + FE ++ QL+C G++ + + G+P+R +F+E N
Sbjct: 656 KLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYN 715
Query: 679 RFGILAPEVLEGNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELD 728
+ P+ L D ++ C+ + GL Y+ G TKVF R G+ AE D
Sbjct: 716 MYKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 499 bits (1285), Expect = e-141, Method: Compositional matrix adjust.
Identities = 297/790 (37%), Positives = 436/790 (55%), Gaps = 48/790 (6%)
Query: 12 HVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKVFPEDTEAPAGGVD-DMTKL 70
+ WV DP ++ E+ G EV V T+ + V K P ++ DM L
Sbjct: 33 NCWVPDPDFGFVGAEIQSTKGDEVTVK-TDKTQETRVVKKDDIGQRNPPKFEMNMDMANL 91
Query: 71 SYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSP 130
++L+E +L NL +RYE IYTY+G IA+NP++RLP +Y ++++Y+G E+ P
Sbjct: 92 TFLNEASILHNLRSRYESGFIYTYSGLFCIAINPYRRLP-IYTQGLVDKYRGKRRAEMPP 150
Query: 131 HVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGR----------- 179
H+F++ D AY+ M+ + ++ S+L++GESGAGKTE TK +++Y A +
Sbjct: 151 HLFSIADNAYQYMLQDRENQSMLITGESGAGKTENTKKVIQYFALVAASLAGKKDKKEEE 210
Query: 180 --SGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTY 237
+ T+E Q+++ NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TY
Sbjct: 211 KKKDEKKGTLEDQIVQCNPVLEAYGNAKTTRNNNSSRFGKFIRIHFGTQGKIAGADIETY 270
Query: 238 LLERSRVCQISDPERNYHCFY-LLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSD 295
LLE+SRV ERNYH FY LL A E+I K + P + ++NQ +DG+ D
Sbjct: 271 LLEKSRVTYQQSAERNYHIFYQLLSPAFPENIEKILAVPDPGLYGFINQGTL-TVDGIDD 329
Query: 296 AHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFA-KGKEIDS-SVIKDEKSRFH 353
E T A D++G +D+E+ ++++ ILHLG + + +G++ ++ + EK F
Sbjct: 330 EEEMGLTDTAFDVLGFTDEEKLSMYKCTGCILHLGEMKWKQRGEQAEADGTAEAEKVAFL 389
Query: 354 LNMTA-ELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWI 412
L + A +LL+C L+K + E +T+ + S ALAK++Y R+F+W+
Sbjct: 390 LGVNAGDLLKC--------LLKPKIKVGTEYVTQGRNKDQVTNSIAALAKSLYDRMFNWL 441
Query: 413 VEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQE 472
V ++N ++ + IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQE
Sbjct: 442 VRRVNQTLDTKAKRQFFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQE 501
Query: 473 EYTREEINWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FA 530
EY +E I W +I+F +D Q ++LIE KP GI+++L+E CMFPK++ +F KL
Sbjct: 502 EYKKEGIVWEFIDFGLDLQACIELIE-KPMGILSILEEECMFPKASDTSFKNKLYDNHLG 560
Query: 531 KNNRFSKPK-----LSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV 585
KN F KPK + F + HYAG V+Y +LDKNKD + LL +K V
Sbjct: 561 KNPMFGKPKPPKAGCAEAHFCLHHYAGSVSYSIAGWLDKNKDPINENVVELLQNSKEPIV 620
Query: 586 AG-------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLK 638
I S K L LM+ L +T PH++RC+ PN +
Sbjct: 621 KMLFTPPRILTPGGKKKKGKSAAFQTISSVHKESLNKLMKNLYSTHPHFVRCIIPNELKT 680
Query: 639 PSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNY-DDQVA 697
P + + V+ QLRC GVLE IRI G+P R + EF R+ ILAP + + D +V
Sbjct: 681 PGLIDAALVLHQLRCNGVLEGIRICRKGFPNRIIYSEFKQRYSILAPNAVPSGFADGKVV 740
Query: 698 CQMILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEF 755
L L Y++G TKVF +AG + L+ R E L Q R Y+ RK +
Sbjct: 741 TDKALSALQLDPNEYRLGNTKVFFKAGVLGMLEDMRDERLSKIISMFQAHIRGYLMRKAY 800
Query: 756 ILLRNAAVIL 765
L++ + L
Sbjct: 801 KKLQDQRIGL 810
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 291/769 (37%), Positives = 417/769 (54%), Gaps = 61/769 (7%)
Query: 13 VWVEDPVLAWINGEVMWINGQEVHVNCTN--GKKVVTSVSKVFPEDTEAPAGGVDDMTKL 70
VW P + G ++ I + + N GK + +++VFP + E V+D L
Sbjct: 16 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDNCSL 74
Query: 71 SYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSP 130
YL+E +L N+ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G + G + P
Sbjct: 75 MYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPP 134
Query: 131 HVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQ 190
HVFA+ D A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++ +
Sbjct: 135 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDR 190
Query: 191 VLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDP 250
++E+NP+LEAFGNAKTVRNNNSSRFGKFVEI F++ + G + YLLE+SR+C
Sbjct: 191 IVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 250
Query: 251 ERNYHCFYLLCAAPHEDI-AKYKLGSPKSFHYLNQSNCYEL------------------- 290
ERNYH FY LCA EDI + L SP +F YLN+ C
Sbjct: 251 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKSPEY 309
Query: 291 -------DGVSDAH-EYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDS 342
D + D H +++ AM +G+ D+E+ +FRVVA +LHLGNIDF +
Sbjct: 310 LKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 369
Query: 343 SVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASR 397
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 370 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 429
Query: 398 DALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEK 457
DALAKT+YS LFD +V ++N + S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 430 DALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEK 488
Query: 458 LQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKST 517
LQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+ +
Sbjct: 489 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 548
Query: 518 HETFSQKLCQTFAKNNRFSKPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKD 567
+ F+ + Q + R S P+ S R D F I H+AG V Y+ F++KN D
Sbjct: 549 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNND 608
Query: 568 YVVAEHQALLTAAKCSFV------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 621
+ ++L+ ++ F+ + +G++FK QL L++ L
Sbjct: 609 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 668
Query: 622 ATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFG 681
+T +IRC+KPN + FE ++ QL+C G++ + + G+P+R +F+E N +
Sbjct: 669 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 728
Query: 682 ILAPEVLEGNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELD 728
P+ L D ++ C+ + GL Y+ G TKVF R G+ AE D
Sbjct: 729 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 776
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 291/769 (37%), Positives = 417/769 (54%), Gaps = 61/769 (7%)
Query: 13 VWVEDPVLAWINGEVMWINGQEVHVNCTN--GKKVVTSVSKVFPEDTEAPAGGVDDMTKL 70
VW P + G ++ I + + N GK + +++VFP + E V+D L
Sbjct: 3 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDNCSL 61
Query: 71 SYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSP 130
YL+E +L N+ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G + G + P
Sbjct: 62 MYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPP 121
Query: 131 HVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQ 190
HVFA+ D A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++ +
Sbjct: 122 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDR 177
Query: 191 VLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDP 250
++E+NP+LEAFGNAKTVRNNNSSRFGKFVEI F++ + G + YLLE+SR+C
Sbjct: 178 IVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 237
Query: 251 ERNYHCFYLLCAAPHEDI-AKYKLGSPKSFHYLNQSNCYEL------------------- 290
ERNYH FY LCA EDI + L SP +F YLN+ C
Sbjct: 238 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKSPEY 296
Query: 291 -------DGVSDAH-EYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDS 342
D + D H +++ AM +G+ D+E+ +FRVVA +LHLGNIDF +
Sbjct: 297 LKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 356
Query: 343 SVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASR 397
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 357 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 416
Query: 398 DALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEK 457
DALAKT+YS LFD +V ++N + S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 417 DALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEK 475
Query: 458 LQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKST 517
LQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+ +
Sbjct: 476 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 535
Query: 518 HETFSQKLCQTFAKNNRFSKPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKD 567
+ F+ + Q + R S P+ S R D F I H+AG V Y+ F++KN D
Sbjct: 536 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNND 595
Query: 568 YVVAEHQALLTAAKCSFV------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 621
+ ++L+ ++ F+ + +G++FK QL L++ L
Sbjct: 596 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 655
Query: 622 ATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFG 681
+T +IRC+KPN + FE ++ QL+C G++ + + G+P+R +F+E N +
Sbjct: 656 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 715
Query: 682 ILAPEVLEGNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELD 728
P+ L D ++ C+ + GL Y+ G TKVF R G+ AE D
Sbjct: 716 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 763
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 498 bits (1283), Expect = e-141, Method: Compositional matrix adjust.
Identities = 292/772 (37%), Positives = 417/772 (54%), Gaps = 61/772 (7%)
Query: 10 GSHVWVEDPVLAWINGEVMWINGQEVHVNCTN--GKKVVTSVSKVFPEDTEAPAGGVDDM 67
G VW P + G ++ I + + N GK + +++VFP + E V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 61
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
L YL+E +L N+ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G + G
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFA+ D A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 177
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQI 247
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVEI F++ + G + YLLE+SR+C
Sbjct: 178 YDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYLLCAAPHEDI-AKYKLGSPKSFHYLNQSNCYEL---------------- 290
ERNYH FY LCA EDI + L SP +F YLN+ C
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKS 296
Query: 291 ----------DGVSDAH-EYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKE 339
D + D H +++ AM +G+ D+E+ +FRVVA +LHLGNIDF +
Sbjct: 297 PEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGS 356
Query: 340 IDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAV 394
KS L AELL D L +L RVM+T VI L A
Sbjct: 357 TSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQAN 416
Query: 395 ASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFT 454
+RDALAKT+YS LFD +V ++N + S IGVLDI GFE F+ NSFEQFCIN+
Sbjct: 417 NARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYC 475
Query: 455 NEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFP 514
NEKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P
Sbjct: 476 NEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLP 535
Query: 515 KSTHETFSQKLCQTFAKNNRFSKPKLS--------RTD--FTILHYAGEVTYQANHFLDK 564
+ + + F+ + Q + R S P+ S R D F I H+AG V Y+ F++K
Sbjct: 536 QPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEK 595
Query: 565 NKDYVVAEHQALLTAAKCSFV------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLME 618
N D + ++L+ ++ F+ + +G++FK QL L++
Sbjct: 596 NNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLD 655
Query: 619 TLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVN 678
L +T +IRC+KPN + FE ++ QL+C G++ + + G+P+R +F+E N
Sbjct: 656 KLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYN 715
Query: 679 RFGILAPEVLEGNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELD 728
+ P+ L D ++ C+ + GL Y+ G TKVF R G+ AE D
Sbjct: 716 MYKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 498 bits (1282), Expect = e-141, Method: Compositional matrix adjust.
Identities = 291/772 (37%), Positives = 419/772 (54%), Gaps = 61/772 (7%)
Query: 10 GSHVWVEDPVLAWINGEVMWINGQEVHVNCTN--GKKVVTSVSKVFPEDTEAPAGGVDDM 67
G VW P + G ++ I + + N GK + +++VFP + ++ V+D
Sbjct: 4 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKD-VEDN 62
Query: 68 TKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGE 127
L YL+E +L N+ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G + G
Sbjct: 63 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 122
Query: 128 LSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFA+ D A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 123 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGT----GQDI 178
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQI 247
+ +++E+NP+LEAFGNAKTVRNNNSSRFGKFVEI F++ + G + YLLE+SR+C
Sbjct: 179 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 238
Query: 248 SDPERNYHCFYLLCAAPHEDI-AKYKLGSPKSFHYLNQSNCYEL---------------- 290
ERNYH FY LCA EDI + L SP +F YLN+ C
Sbjct: 239 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKS 297
Query: 291 ----------DGVSDAH-EYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKE 339
D + D H +++ AM +G+ D+E+ +FRVVA +LHLGNIDF +
Sbjct: 298 PEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGS 357
Query: 340 IDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAV 394
KS L AELL D L +L RVM+T VI L A
Sbjct: 358 TSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQAN 417
Query: 395 ASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFT 454
+RDALAKT+YS LFD +V ++N + S IGVLDI GFE F+ NSFEQFCIN+
Sbjct: 418 NARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYC 476
Query: 455 NEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFP 514
NEKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P
Sbjct: 477 NEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLP 536
Query: 515 KSTHETFSQKLCQTFAKNNRFSKPKLS--------RTD--FTILHYAGEVTYQANHFLDK 564
+ + + F+ + Q + R S P+ S R D F I H+AG V Y+ F++K
Sbjct: 537 QPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEK 596
Query: 565 NKDYVVAEHQALLTAAKCSFV------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLME 618
N D + ++L+ ++ F+ + +G++FK QL L++
Sbjct: 597 NNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLD 656
Query: 619 TLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVN 678
L +T +IRC+KPN + FE ++ QL+C G++ + + G+P+R +F+E N
Sbjct: 657 KLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYN 716
Query: 679 RFGILAPEVLEGNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELD 728
+ P+ L D ++ C+ + GL Y+ G TKVF R G+ AE D
Sbjct: 717 MYKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 767
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 497 bits (1280), Expect = e-140, Method: Compositional matrix adjust.
Identities = 291/769 (37%), Positives = 416/769 (54%), Gaps = 61/769 (7%)
Query: 13 VWVEDPVLAWINGEVMWINGQEVHVNCTN--GKKVVTSVSKVFPEDTEAPAGGVDDMTKL 70
VW P + G ++ I + + N GK + +++VFP + E V+D L
Sbjct: 4 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDNCSL 62
Query: 71 SYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSP 130
YL+E +L N+ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G + G + P
Sbjct: 63 MYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPP 122
Query: 131 HVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQ 190
HVFA+ D A+R M S SI+VSGESGAGKTE TK ++RYL G G+ + +
Sbjct: 123 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIYDR 178
Query: 191 VLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDP 250
++E+NP+LEAFGNAKTVRNNNSSRFGKFVEI F++ + G + YLLE+SR+C
Sbjct: 179 IVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 238
Query: 251 ERNYHCFYLLCAAPHEDI-AKYKLGSPKSFHYLNQSNCYEL------------------- 290
ERNYH FY LCA EDI + L SP +F YLN+ C
Sbjct: 239 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKSPEY 297
Query: 291 -------DGVSDAH-EYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDS 342
D + D H +++ AM +G+ D+E+ +FRVVA +LHLGNIDF +
Sbjct: 298 LKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 357
Query: 343 SVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASR 397
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 358 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 417
Query: 398 DALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEK 457
DALAKT+YS LFD +V ++N + S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 418 DALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEK 476
Query: 458 LQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKST 517
LQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+ +
Sbjct: 477 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 536
Query: 518 HETFSQKLCQTFAKNNRFSKPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKD 567
+ F+ + Q + R S P+ S R D F I H+AG V Y+ F++KN D
Sbjct: 537 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNND 596
Query: 568 YVVAEHQALLTAAKCSFV------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 621
+ ++L+ ++ F+ + +G++FK QL L++ L
Sbjct: 597 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 656
Query: 622 ATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFG 681
+T +IRC+KPN + FE ++ QL+C G++ + + G+P+R +F+E N +
Sbjct: 657 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 716
Query: 682 ILAPEVLEGNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELD 728
P+ L D ++ C+ + GL Y+ G TKVF R G+ AE D
Sbjct: 717 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 764
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 496 bits (1277), Expect = e-140, Method: Compositional matrix adjust.
Identities = 290/769 (37%), Positives = 416/769 (54%), Gaps = 61/769 (7%)
Query: 13 VWVEDPVLAWINGEVMWINGQEVHVNCTN--GKKVVTSVSKVFPEDTEAPAGGVDDMTKL 70
VW P + G ++ + + N GK + +++VFP + E V+D L
Sbjct: 16 VWAPHPTDGFQVGNIVRRGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDNCSL 74
Query: 71 SYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSP 130
YL+E +L N+ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G + G + P
Sbjct: 75 MYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPP 134
Query: 131 HVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQ 190
HVFA+ D A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++ +
Sbjct: 135 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDR 190
Query: 191 VLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDP 250
++E+NP+LEAFGNAKTVRNNNSSRFGKFVEI F++ + G + YLLE+SR+C
Sbjct: 191 IVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 250
Query: 251 ERNYHCFYLLCAAPHEDI-AKYKLGSPKSFHYLNQSNCYEL------------------- 290
ERNYH FY LCA EDI + L SP +F YLN+ C
Sbjct: 251 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKSPEY 309
Query: 291 -------DGVSDAH-EYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDS 342
D + D H +++ AM +G+ D+E+ +FRVVA +LHLGNIDF +
Sbjct: 310 LKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG 369
Query: 343 SVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASR 397
KS L AELL D L +L RVM+T VI L A +R
Sbjct: 370 GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR 429
Query: 398 DALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEK 457
DALAKT+YS LFD +V ++N + S IGVLDI GFE F+ NSFEQFCIN+ NEK
Sbjct: 430 DALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEK 488
Query: 458 LQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKST 517
LQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+ +
Sbjct: 489 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 548
Query: 518 HETFSQKLCQTFAKNNRFSKPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKD 567
+ F+ + Q + R S P+ S R D F I H+AG V Y+ F++KN D
Sbjct: 549 DQHFTSAVHQKHKDHFRLSIPRKSKLAIHENIRDDEGFIIRHFAGAVCYETTQFVEKNND 608
Query: 568 YVVAEHQALLTAAKCSFV------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLN 621
+ ++L+ ++ F+ + +G++FK QL L++ L
Sbjct: 609 ALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLR 668
Query: 622 ATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFG 681
+T +IRC+KPN + FE ++ QL+C G++ + + G+P+R +F+E N +
Sbjct: 669 STGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYK 728
Query: 682 ILAPEVLEGNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELD 728
P+ L D ++ C+ + GL Y+ G TKVF R G+ AE D
Sbjct: 729 KYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 776
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust.
Identities = 297/792 (37%), Positives = 432/792 (54%), Gaps = 63/792 (7%)
Query: 13 VWVEDPVLAWINGEVMWINGQEVHVNCT-NGKKVVTS---VSKVFPEDTEAPAGGVDDMT 68
VWV + + G EV V NGKKV S + K+ P V+DM
Sbjct: 34 VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNP----PKFSKVEDMA 89
Query: 69 KLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGEL 128
+L+ L+E VL NL RY IYTY+G + +NP+++LP +Y +++ YKG E+
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEM 148
Query: 129 SPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT-- 186
PH++A+ D AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 149 PPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSI 208
Query: 187 ----------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRT 236
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I T
Sbjct: 209 TQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIET 268
Query: 237 YLLERSRVCQISDPERNYHCFYLLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSD 295
YLLE+SR + + ER +H FY L A E + L ++ +L+ + + D
Sbjct: 269 YLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQD 327
Query: 296 AHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLN 355
+ T AM I+G +++EQ +I RVV+++L LGNI F K + D + + D
Sbjct: 328 DEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN------- 380
Query: 356 MTAELLRCDAQSLEDALIKRVMVTP-----EEVITRTLDPVNAVASRDALAKTIYSRLFD 410
TA C + R ++TP +V+ + A + +ALAK + RLF
Sbjct: 381 -TAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFR 439
Query: 411 WIVEKINISIGQDP-DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKM 469
WI+ ++N ++ + S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +
Sbjct: 440 WILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFIL 499
Query: 470 EQEEYTREEINWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLC 526
EQEEY RE I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL
Sbjct: 500 EQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLI 559
Query: 527 QTFAKNNRFSKPKL--SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSF 584
Q + +F K K +T+F ILHYAG+VTY A+ +L KN D + +LL + F
Sbjct: 560 QEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKF 619
Query: 585 VAG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPH 626
VA +G +K QL LM TL T P+
Sbjct: 620 VADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPN 679
Query: 627 YIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPE 686
++RC+ PN+ + + V++QLRC GVLE IRI G+P R F EF R+ ILA
Sbjct: 680 FVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAAN 739
Query: 687 VL-EGNYDDQVACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQ 743
+ +G D + AC +++ L Y+IG++K+F R G +A L+ R + + Q
Sbjct: 740 AIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQ 799
Query: 744 RQTRTYIARKEF 755
Q R Y+ARK F
Sbjct: 800 AQCRGYLARKAF 811
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust.
Identities = 317/908 (34%), Positives = 479/908 (52%), Gaps = 98/908 (10%)
Query: 13 VWVEDPVLAWINGEVMWINGQEVHVNCT-NGKKVVTS---VSKVFPEDTEAPAGGVDDMT 68
VWV + + G EV V NGKKV S + K+ P V+DM
Sbjct: 34 VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNP----PKFSKVEDMA 89
Query: 69 KLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGEL 128
+L+ L+E VL NL RY IYTY+G + +NP+++LP +Y +++ YKG E+
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEM 148
Query: 129 SPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT-- 186
PH++A+ D AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 149 PPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSI 208
Query: 187 ----------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRT 236
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I T
Sbjct: 209 TQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIET 268
Query: 237 YLLERSRVCQISDPERNYHCFYLLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSD 295
YLLE+SR + + ER +H FY L A E + L ++ +L+ + + D
Sbjct: 269 YLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQD 327
Query: 296 AHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLN 355
+ T AM I+G +++EQ +I RVV+++L LGNI F K + D + + D
Sbjct: 328 DEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN------- 380
Query: 356 MTAELLRCDAQSLEDALIKRVMVTP-----EEVITRTLDPVNAVASRDALAKTIYSRLFD 410
TA C + R ++TP +V+ + A + +ALAK + RLF
Sbjct: 381 -TAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFR 439
Query: 411 WIVEKINISIGQDP-DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKM 469
WI+ ++N ++ + S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +
Sbjct: 440 WILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFIL 499
Query: 470 EQEEYTREEINWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLC 526
EQEEY RE I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL
Sbjct: 500 EQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLI 559
Query: 527 QTFAKNNRFSKPKL--SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSF 584
Q + +F K K +T+F ILHYAG+VTY A+ +L KN D + +LL + F
Sbjct: 560 QEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKF 619
Query: 585 VAG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPH 626
VA +G +K QL LM TL T P+
Sbjct: 620 VADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPN 679
Query: 627 YIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPE 686
++RC+ PN+ + + V++QLRC GVLE IRI G+P R F EF R+ ILA
Sbjct: 680 FVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAAN 739
Query: 687 VL-EGNYDDQVACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQ 743
+ +G D + AC +++ L Y+IG++K+F R G +A L+ R + + Q
Sbjct: 740 AIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQ 799
Query: 744 RQTRTYIARKEF-----------ILLRNAAVILQSFLRGEMARKLYEQLR---------R 783
Q R Y+ARK F ++ RN A L+ LR +L+ +++ +
Sbjct: 800 AQCRGYLARKAFAKRQQQLTAMKVIQRNCAAYLK--LRNWQWWRLFTKVKPLLQSAEREK 857
Query: 784 EAAALK-----IQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIA 838
E A++K ++ A+R L + +++ + +N+ +L+ + + +A
Sbjct: 858 EMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQE--------KNDLQLQVQAEQDNLA 909
Query: 839 QAQWRCHQ 846
A+ RC Q
Sbjct: 910 DAEERCDQ 917
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust.
Identities = 317/908 (34%), Positives = 479/908 (52%), Gaps = 98/908 (10%)
Query: 13 VWVEDPVLAWINGEVMWINGQEVHVNCT-NGKKVVTS---VSKVFPEDTEAPAGGVDDMT 68
VWV + + G EV V NGKKV S + K+ P V+DM
Sbjct: 34 VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNP----PKFSKVEDMA 89
Query: 69 KLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGEL 128
+L+ L+E VL NL RY IYTY+G + +NP+++LP +Y +++ YKG E+
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEM 148
Query: 129 SPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT-- 186
PH++A+ D AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 149 PPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSI 208
Query: 187 ----------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRT 236
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I T
Sbjct: 209 TQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIET 268
Query: 237 YLLERSRVCQISDPERNYHCFYLLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSD 295
YLLE+SR + + ER +H FY L A E + L ++ +L+ + + D
Sbjct: 269 YLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQD 327
Query: 296 AHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLN 355
+ T AM I+G +++EQ +I RVV+++L LGNI F K + D + + D
Sbjct: 328 DEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN------- 380
Query: 356 MTAELLRCDAQSLEDALIKRVMVTP-----EEVITRTLDPVNAVASRDALAKTIYSRLFD 410
TA C + R ++TP +V+ + A + +ALAK + RLF
Sbjct: 381 -TAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFR 439
Query: 411 WIVEKINISIGQDP-DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKM 469
WI+ ++N ++ + S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +
Sbjct: 440 WILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFIL 499
Query: 470 EQEEYTREEINWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLC 526
EQEEY RE I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL
Sbjct: 500 EQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLI 559
Query: 527 QTFAKNNRFSKPKL--SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSF 584
Q + +F K K +T+F ILHYAG+VTY A+ +L KN D + +LL + F
Sbjct: 560 QEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKF 619
Query: 585 VAG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPH 626
VA +G +K QL LM TL T P+
Sbjct: 620 VADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPN 679
Query: 627 YIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPE 686
++RC+ PN+ + + V++QLRC GVLE IRI G+P R F EF R+ ILA
Sbjct: 680 FVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAAN 739
Query: 687 VL-EGNYDDQVACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQ 743
+ +G D + AC +++ L Y+IG++K+F R G +A L+ R + + Q
Sbjct: 740 AIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQ 799
Query: 744 RQTRTYIARKEF-----------ILLRNAAVILQSFLRGEMARKLYEQLR---------R 783
Q R Y+ARK F ++ RN A L+ LR +L+ +++ +
Sbjct: 800 AQCRGYLARKAFAKRQQQLTAMKVIQRNCAAYLK--LRNWQWWRLFTKVKPLLQSAEREK 857
Query: 784 EAAALK-----IQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIA 838
E A++K ++ A+R L + +++ + +N+ +L+ + + +A
Sbjct: 858 EMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQE--------KNDLQLQVQAEQDNLA 909
Query: 839 QAQWRCHQ 846
A+ RC Q
Sbjct: 910 DAEERCDQ 917
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 490 bits (1262), Expect = e-138, Method: Compositional matrix adjust.
Identities = 296/790 (37%), Positives = 431/790 (54%), Gaps = 59/790 (7%)
Query: 13 VWVEDPVLAWINGEVMWINGQEVHVNCT-NGKKVVTSVSKVFPEDTEAPA-GGVDDMTKL 70
VWV + + G EV V NGKKV S + + P V+DM +L
Sbjct: 34 VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDI--QKMNPPKFSKVEDMAEL 91
Query: 71 SYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSP 130
+ L+E VL NL RY IYTY+G + +NP+++LP +Y +++ YKG E+ P
Sbjct: 92 TCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMPP 150
Query: 131 HVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT---- 186
H++A+ D AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 151 HIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQ 210
Query: 187 --------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYL 238
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I TYL
Sbjct: 211 GPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYL 270
Query: 239 LERSRVCQISDPERNYHCFYLLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSDAH 297
LE+SR + + ER +H FY L A E + L ++ +L+ + + D
Sbjct: 271 LEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDE 329
Query: 298 EYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMT 357
+ T AM I+G +++EQ +I RVV+++L LGNI F K + D + + D T
Sbjct: 330 MFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--------T 381
Query: 358 AELLRCDAQSLEDALIKRVMVTP-----EEVITRTLDPVNAVASRDALAKTIYSRLFDWI 412
A C + R ++TP +V+ + A + +ALAK + RLF WI
Sbjct: 382 AAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWI 441
Query: 413 VEKINISIGQDP-DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQ 471
+ ++N ++ + S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +EQ
Sbjct: 442 LTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQ 501
Query: 472 EEYTREEINWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLCQT 528
EEY RE I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL Q
Sbjct: 502 EEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQE 561
Query: 529 FAKNNRFSKPKL--SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVA 586
+ +F K K +T+F ILHYAG+VTY A+ +L KN D + +LL + FVA
Sbjct: 562 QGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVA 621
Query: 587 G------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYI 628
+G +K QL LM TL T P+++
Sbjct: 622 DLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFV 681
Query: 629 RCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL 688
RC+ PN+ + + V++QLRC GVLE IRI G+P R F EF R+ ILA +
Sbjct: 682 RCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAI 741
Query: 689 -EGNYDDQVACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQ 745
+G D + AC +++ L Y+IG++K+F R G +A L+ R + + Q Q
Sbjct: 742 PKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQ 801
Query: 746 TRTYIARKEF 755
R Y+ARK F
Sbjct: 802 CRGYLARKAF 811
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 296/790 (37%), Positives = 431/790 (54%), Gaps = 59/790 (7%)
Query: 13 VWVEDPVLAWINGEVMWINGQEVHVNCT-NGKKVVTSVSKVFPEDTEAPA-GGVDDMTKL 70
VWV + + G EV V NGKKV S + + P V+DM +L
Sbjct: 34 VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDI--QKMNPPKFSKVEDMAEL 91
Query: 71 SYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSP 130
+ L+E VL NL RY IYTY+G + +NP+++LP +Y +++ YKG E+ P
Sbjct: 92 TCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMPP 150
Query: 131 HVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT---- 186
H++A+ D AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 151 HIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQ 210
Query: 187 --------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYL 238
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I TYL
Sbjct: 211 GPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYL 270
Query: 239 LERSRVCQISDPERNYHCFYLLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSDAH 297
LE+SR + + ER +H FY L A E + L ++ +L+ + + D
Sbjct: 271 LEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDE 329
Query: 298 EYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMT 357
+ T AM I+G +++EQ +I RVV+++L LGNI F K + D + + D T
Sbjct: 330 MFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--------T 381
Query: 358 AELLRCDAQSLEDALIKRVMVTP-----EEVITRTLDPVNAVASRDALAKTIYSRLFDWI 412
A C + R ++TP +V+ + A + +ALAK + RLF WI
Sbjct: 382 AAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWI 441
Query: 413 VEKINISIGQDP-DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQ 471
+ ++N ++ + S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +EQ
Sbjct: 442 LTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQ 501
Query: 472 EEYTREEINWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLCQT 528
EEY RE I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL Q
Sbjct: 502 EEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQE 561
Query: 529 FAKNNRFSKPKL--SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVA 586
+ +F K K +T+F ILHYAG+VTY A+ +L KN D + +LL + FVA
Sbjct: 562 QGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVA 621
Query: 587 G------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYI 628
+G +K QL LM TL T P+++
Sbjct: 622 DLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFV 681
Query: 629 RCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL 688
RC+ PN+ + + V++QLRC GVLE IRI G+P R F EF R+ ILA +
Sbjct: 682 RCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAI 741
Query: 689 -EGNYDDQVACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQ 745
+G D + AC +++ L Y+IG++K+F R G +A L+ R + + Q Q
Sbjct: 742 PKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQ 801
Query: 746 TRTYIARKEF 755
R Y+ARK F
Sbjct: 802 CRGYLARKAF 811
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust.
Identities = 287/781 (36%), Positives = 431/781 (55%), Gaps = 49/781 (6%)
Query: 11 SHVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKVFPEDTEAPAGGVDDMTKL 70
S V+V P +++ G + G +V V G+ + +VF + ++DM +
Sbjct: 33 SSVFVVHPKESFVKGTIQSKEGGKVTVKTEGGETLTVKEDQVFSMNP-PKYDKIEDMAMM 91
Query: 71 SYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSP 130
++LHEP VL NL RY IYTY+G + VNP++ LP +Y+ ++ Y+G E P
Sbjct: 92 THLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQEAPP 150
Query: 131 HVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG--------RSGV 182
H+F++ D AY+ M+ + ++ SIL++GESGAGKT TK +++Y A + +SG
Sbjct: 151 HIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGK 210
Query: 183 EGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERS 242
T+E Q++ +NP+LEAFGNAKTVRN+NSSRFGKF+ I F G+++ A I TYLLE+S
Sbjct: 211 MQGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKS 270
Query: 243 RVCQISDPERNYHCFYLLCAAPHEDIAKYKL--GSPKSFHYLNQSNCYELDGVSDAHEYL 300
RV ER+YH FY + + ++ L +P +HY++Q + + D E +
Sbjct: 271 RVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHYVSQGEI-TVPSIDDQEELM 329
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGK-----EIDSSVIKDEKSRFHLN 355
AT A+DI+G S E+ AI+++ A++H GN+ F + + E D + + D+ +
Sbjct: 330 ATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLMGL 389
Query: 356 MTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEK 415
+AELL+ AL + E +T+ S ALAK +Y ++F W+V +
Sbjct: 390 NSAELLK--------ALCYPRVKVGNEFVTKGQTVSQVHNSVGALAKAVYEKMFLWMVIR 441
Query: 416 INISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYT 475
IN + + IGVLDI GFE F NSFEQ CINFTNEKLQQ FN H+F +EQEEY
Sbjct: 442 INQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYK 501
Query: 476 REEINWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLC-QTFAKNN 533
+E I W +I+F +D ++LIEK P GI ++L+E CMFPK+T +F KL Q K+N
Sbjct: 502 KEGIEWEFIDFGMDLAACIELIEK-PMGIFSILEEECMFPKATDTSFKNKLYDQHLGKSN 560
Query: 534 RFSKPKLSR----TDFTILHYAGEVTYQANHFLDKNKD----YVVAEHQ-------ALLT 578
F KPK ++ F+++HYAG V Y + +L+KNKD V+ +Q ALL
Sbjct: 561 NFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLF 620
Query: 579 AAKCSFVAGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLK 638
A A + + F+ L LM L +T PH++RC+ PN
Sbjct: 621 ATYGG-EAEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKT 679
Query: 639 PSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGIL-APEVLEGNY-DDQV 696
P E+ V+ QLRC GVLE IRI G+P+R + +F R+ +L A + EG + D +
Sbjct: 680 PGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKK 739
Query: 697 ACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKE 754
A + +L + Y+ G TKVF +AG + L+ R + L + Q + R ++ R E
Sbjct: 740 ASEKLLGSIDVDHTQYRFGHTKVFFKAGLLGLLEEMRDDKLAEIITRTQARCRGFLMRVE 799
Query: 755 F 755
+
Sbjct: 800 Y 800
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 477 bits (1227), Expect = e-134, Method: Compositional matrix adjust.
Identities = 288/766 (37%), Positives = 420/766 (54%), Gaps = 59/766 (7%)
Query: 13 VWVEDPVLAWINGEVMWINGQEVHVNCT-NGKKVVTSVSKVFPEDTEAPA-GGVDDMTKL 70
VWV + + G EV V NGKKV S + + P V+DM +L
Sbjct: 34 VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDI--QKMNPPKFSKVEDMAEL 91
Query: 71 SYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSP 130
+ L+E VL NL RY IYTY+G + +NP+++LP +Y +++ YKG E+ P
Sbjct: 92 TCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMPP 150
Query: 131 HVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT---- 186
H++A+ D AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 151 HIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQ 210
Query: 187 --------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYL 238
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I TYL
Sbjct: 211 GPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYL 270
Query: 239 LERSRVCQISDPERNYHCFYLLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSDAH 297
LE+SR + + ER +H FY L A E + L ++ +L+ + + D
Sbjct: 271 LEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDE 329
Query: 298 EYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMT 357
+ T AM I+G +++EQ +I RVV+++L LGNI F K + D + + D T
Sbjct: 330 MFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--------T 381
Query: 358 AELLRCDAQSLEDALIKRVMVTP-----EEVITRTLDPVNAVASRDALAKTIYSRLFDWI 412
A C + R ++TP +V+ + A + +ALAK + RLF WI
Sbjct: 382 AAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWI 441
Query: 413 VEKINISIGQDP-DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQ 471
+ ++N ++ + S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +EQ
Sbjct: 442 LTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQ 501
Query: 472 EEYTREEINWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLCQT 528
EEY RE I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL Q
Sbjct: 502 EEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQE 561
Query: 529 FAKNNRFSKPKL--SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVA 586
+ +F K K +T+F ILHYAG+VTY A+ +L KN D + +LL + FVA
Sbjct: 562 QGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVA 621
Query: 587 G------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYI 628
+G +K QL LM TL T P+++
Sbjct: 622 DLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFV 681
Query: 629 RCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL 688
RC+ PN+ + + V++QLRC GVLE IRI G+P R F EF R+ ILA +
Sbjct: 682 RCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAI 741
Query: 689 -EGNYDDQVACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDARR 731
+G D + AC +++ L Y+IG++K+F R G +A L+ R
Sbjct: 742 PKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEER 787
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/679 (39%), Positives = 401/679 (59%), Gaps = 24/679 (3%)
Query: 61 AGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQY 120
A GV D L+ + E ++NL R++ + IYTY G+++I+ NPF+ L ++Y ++ Y
Sbjct: 7 AEGVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNL-NIYKESDIKAY 65
Query: 121 KGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS 180
G E+ PH++A+ + AYR+M ++ +++SGESGAGKTE +K +M++L ++
Sbjct: 66 NGRYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQ 125
Query: 181 GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLE 240
G + + +L+SNP+LEAFGNAKT+RN+NSSRFGK++E+QF+ G G I YLLE
Sbjct: 126 SPNGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLE 185
Query: 241 RSRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLG-SPKSFHYLNQSNCYELDGVSDAHE 298
+SRV + ER++H FY +L + + L + ++ YL +S C+++ + D+ E
Sbjct: 186 KSRVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGE 245
Query: 299 YLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSV----IKDEKSRFHL 354
+ +AM+ +G+ + +Q +I+R++AAILH+GNI FA+ E + + D KS L
Sbjct: 246 FKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKS---L 302
Query: 355 NMTAELLRCDAQSLEDALIKRVMVTPE----EVITRTLDPVNAVASRDALAKTIYSRLFD 410
A L+ D QSL AL R + T EVI+ +D A SRDALAK +Y RLF+
Sbjct: 303 AAAASCLKTDQQSLSIALCYRSISTGVGKRCEVISVPMDCNQAAYSRDALAKALYERLFN 362
Query: 411 WIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKME 470
W+V KIN I + +IG+LDIYGFE F+ NSFEQ INF NEKLQQ F + K E
Sbjct: 363 WLVSKINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSE 422
Query: 471 QEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFA 530
QEEY RE I W IE+ +N+ + +LIEKKP G+I+LLDEAC+ KST +TF +C+ F
Sbjct: 423 QEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFE 482
Query: 531 KNNRFSKPKLSR------TDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSF 584
KN +S+ T F + HYAG+VTY FLDKNKD + + + + ++
Sbjct: 483 KNPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPL 542
Query: 585 VAGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFEN 644
V G GS+F+ + +L+ TL A +PHY+RC+K N+ + + +
Sbjct: 543 VQGLFPPTRPEDSKKRPETA-GSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDE 601
Query: 645 FNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEG-NYDDQVACQMILD 703
V Q+R G+LE +R+ AG+ R + F NR+ +L + N + A ++IL
Sbjct: 602 DRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQ 661
Query: 704 KKGLKGYQI--GKTKVFLR 720
+ + +I GKTKVF+R
Sbjct: 662 QHNIDKEEIRMGKTKVFIR 680
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 473 bits (1218), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/679 (38%), Positives = 400/679 (58%), Gaps = 24/679 (3%)
Query: 61 AGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQY 120
A GV D L+ + E ++NL R++ + IYTY G+++I+ NPF+ L ++Y ++ Y
Sbjct: 7 AEGVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNL-NIYKESDIKAY 65
Query: 121 KGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS 180
G E+ PH++A+ + AYR+M ++ +++SGESGAGKTE +K +M++L ++
Sbjct: 66 NGRYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQ 125
Query: 181 GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLE 240
G + + +L+SNP+LEAFGNAKT+RN+NSSRFGK++E+QF+ G G I YLLE
Sbjct: 126 SPNGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLE 185
Query: 241 RSRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLG-SPKSFHYLNQSNCYELDGVSDAHE 298
+SRV + ER++H FY +L + + L + ++ YL +S C+++ + D+ E
Sbjct: 186 KSRVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGE 245
Query: 299 YLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSV----IKDEKSRFHL 354
+ +AM+ +G+ + +Q +I+R++AAILH+GNI FA+ E + + D KS L
Sbjct: 246 FKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKS---L 302
Query: 355 NMTAELLRCDAQSLEDALIKRVMVTPE----EVITRTLDPVNAVASRDALAKTIYSRLFD 410
A L+ D QSL AL R + T VI+ +D A SRDALAK +Y RLF+
Sbjct: 303 AAAASCLKTDQQSLSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFN 362
Query: 411 WIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKME 470
W+V KIN I + +IG+LDIYGFE F+ NSFEQ INF NEKLQQ F + K E
Sbjct: 363 WLVSKINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSE 422
Query: 471 QEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFA 530
QEEY RE I W IE+ +N+ + +LIEKKP G+I+LLDEAC+ KST +TF +C+ F
Sbjct: 423 QEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFE 482
Query: 531 KNNRFSKPKLSR------TDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSF 584
KN +S+ T F + HYAG+VTY FLDKNKD + + + + ++
Sbjct: 483 KNPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPL 542
Query: 585 VAGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFEN 644
V G GS+F+ + +L+ TL A +PHY+RC+K N+ + + +
Sbjct: 543 VQGLFPPTRPEDSKKRPETA-GSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDE 601
Query: 645 FNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEG-NYDDQVACQMILD 703
V Q+R G+LE +R+ AG+ R + F NR+ +L + N + A ++IL
Sbjct: 602 DRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQ 661
Query: 704 KKGLKGYQI--GKTKVFLR 720
+ + +I GKTKVF+R
Sbjct: 662 QHNIDKEEIRMGKTKVFIR 680
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 468 bits (1204), Expect = e-131, Method: Compositional matrix adjust.
Identities = 278/707 (39%), Positives = 405/707 (57%), Gaps = 51/707 (7%)
Query: 64 VDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGA 123
+DM +L+ L+E VL NL RY IYTY+G + +NP+++LP +Y ++E Y+G
Sbjct: 62 AEDMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVVINPYKQLP-IYTEAIVEMYRGK 120
Query: 124 AFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG----GR 179
E+ PHV+AV + AYR+M+ + + SIL +GESGAGKTE TK +++YLA++ GR
Sbjct: 121 KRHEVPPHVYAVTEGAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSPKGR 180
Query: 180 S--GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTY 237
GV G +E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I TY
Sbjct: 181 KEPGVPGE-LERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGANIETY 239
Query: 238 LLERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAH 297
LLE+SR + + E ++H FY L E + L P S HY +N +
Sbjct: 240 LLEKSRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCS-HYRFLTNGPSSSPGQERE 298
Query: 298 EYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMT 357
+ T ++ ++G S +E ++ R+V+A+L GNI + + D + + D N
Sbjct: 299 LFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRERNTDQATMPD-------NTA 351
Query: 358 AELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASR-------DALAKTIYSRLFD 410
A+ L C L R ++TP + R D V ++ +ALAK Y RLF
Sbjct: 352 AQKL-CRLLGLGVTDFSRALLTPRIKVGR--DYVQKAQTKEQADFALEALAKATYERLFR 408
Query: 411 WIVEKINISIGQDP-DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKM 469
W+V ++N ++ + P S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +
Sbjct: 409 WLVLRLNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVL 468
Query: 470 EQEEYTREEINWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLC 526
EQEEY RE I W++++F +D Q +DLIE+ P G++ALLDE C FPK+T ++F +K+
Sbjct: 469 EQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVA 528
Query: 527 QTFAKNNRFSKPKLSR--TDFTILHYAGEVTYQANHFLDKNKDYVVAEHQAL-------L 577
Q + +F +P+ R DF++LHYAG+V Y+AN +L KN D + AL L
Sbjct: 529 QEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRL 588
Query: 578 TAAKCSFVAGXXXXXXXXX---------XXXXXXXXIGSRFKLQLQSLMETLNATAPHYI 628
TA V G +G +K L LM TL+ T P ++
Sbjct: 589 TAEIWKDVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSFV 648
Query: 629 RCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL 688
RC+ PN+ + E V+ QLRC GVLE IRI G+P R F EF R+ IL P +
Sbjct: 649 RCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILTPNAI 708
Query: 689 -EGNYDDQVACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDARRA 732
+G D + AC+ ++ L Y++G++K+F RAG +A+L+ RA
Sbjct: 709 PKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERA 755
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 276/753 (36%), Positives = 421/753 (55%), Gaps = 38/753 (5%)
Query: 13 VWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKVFPEDTEAPAGGVDDMTKLSY 72
V+V D ++ +++ G +V GK V +V ++ ++DM L++
Sbjct: 37 VFVPDDKQEFVKAKIVSREGGKVTAETEYGKTVTVKEDQVMQQNPPK-FDKIEDMAMLTF 95
Query: 73 LHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHV 132
LHEP VL NL RY IYTY+G + VNP++ LP +Y ++ Y+G E PH+
Sbjct: 96 LHEPAVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLP-VYTPEVVAAYRGKKRSEAPPHI 154
Query: 133 FAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRY---LAYLGGRSGVE---GR- 185
F++ D AY+ M+ + ++ SIL++GESGAGKT TK +++Y +A +G RS + G+
Sbjct: 155 FSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKDQSPGKG 214
Query: 186 TVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVC 245
T+E Q++++NP LEAFGNAKTVRN+NSSRFGKF+ I F G+++ A I TYLLE+SRV
Sbjct: 215 TLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVI 274
Query: 246 QISDPERNYHCFYLLCAAPHEDIAKYKL--GSPKSFHYLNQSNCYELDGVSDAHEYLATR 303
ER+YH FY + + ++ L +P + +++Q + + DA E +AT
Sbjct: 275 FQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAFISQGET-TVASIDDAEELMATD 333
Query: 304 RAMDIVGISDQEQEAIFRVVAAILHLGNIDFA-KGKEIDSSVIKDEKSRFHLNMTAELLR 362
A D++G + +E+ +++++ AI+H GN+ F K +E + E++ + +A L+
Sbjct: 334 NAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEEA----DKSAYLMG 389
Query: 363 CDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQ 422
++ L L + E +T+ + + + ALAK +Y R+F+W+V +IN ++
Sbjct: 390 LNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLET 449
Query: 423 DPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWS 482
+ IGVLDI GFE F NSFEQ CINFTNEKLQQ FN H+F +EQEEY +E I W+
Sbjct: 450 KQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWT 509
Query: 483 YIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKPK- 539
+I+F +D Q +DLIE KP GI+++L+E CMFPK+T TF KL K+ F KP+
Sbjct: 510 FIDFGMDLQACIDLIE-KPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRN 568
Query: 540 ---LSRTDFTILHYAGEVTYQANHFLDKNKD----YVVAEHQ----ALLTAAKCSFVAGX 588
F+++HYAG V Y +L KNKD VV +Q LL+ ++
Sbjct: 569 IKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGAD 628
Query: 589 X--XXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFN 646
+ + + L LM L +T PH++RC+ PN P + +N
Sbjct: 629 APIEKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPL 688
Query: 647 VIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNY-DDQVACQMILDK 704
V+ QLRC GVLE IRI G+P R + +F R+ IL P + EG + D + + +L
Sbjct: 689 VMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSS 748
Query: 705 KGL--KGYQIGKTKVFLRAGQMAELDARRAEVL 735
+ Y+ G TKVF +AG + L+ R E L
Sbjct: 749 LDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERL 781
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 275/781 (35%), Positives = 411/781 (52%), Gaps = 49/781 (6%)
Query: 11 SHVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKVFPEDTEAPAGGVDDMTKL 70
S V+V P +++ G + G V V G+ + +VF + ++DM +
Sbjct: 36 SSVFVVHPKQSFVXGTIQSXEGGXVTVXTEGGETLTVKEDQVFSMNPPX-YDXIEDMAMM 94
Query: 71 SYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSP 130
++LHEP VL NL RY IYTY+G + VNP+ LP +Y+ ++ Y+G E P
Sbjct: 95 THLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLP-VYNPXVVLAYRGKKRQEAPP 153
Query: 131 HVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG--------RSGV 182
H+F++ D AY+ M+ + ++ SIL++GESGAGKT T +++Y A + +SG
Sbjct: 154 HIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQSGK 213
Query: 183 EGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERS 242
T+E Q++ +NP+LEAFGNA TVRN+NSSRFG F+ I F G+++ A I TYLLE S
Sbjct: 214 MQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXS 273
Query: 243 RVCQISDPERNYHCFYLLCAAPHEDIAKYKL--GSPKSFHYLNQSNCYELDGVSDAHEYL 300
RV ER+YH FY + + ++ L +P +HY+++ + + D E +
Sbjct: 274 RVTFQLPAERSYHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSIDDQEELM 332
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGK-----EIDSSVIKDEKSRFHLN 355
AT A+DI+G S E AI+ + A++H GN+ F + + E D + + D +
Sbjct: 333 ATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLMGL 392
Query: 356 MTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEK 415
+AELL+ A + VT E ++ + V A LA +Y +F W+V +
Sbjct: 393 NSAELLK--ALCYPRVGVGNEAVTXGETVSEVHNSVGA------LAXAVYEXMFLWMVIR 444
Query: 416 INISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYT 475
IN + + IGVLDI GFE F NSFEQ CINFTNE LQQ FN H+F +EQEEY
Sbjct: 445 INQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYX 504
Query: 476 REEINWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLC-QTFAKNN 533
E I W +I+F +D ++LIE P GI ++L+E CMFPK+T +F L + K+N
Sbjct: 505 XEGIEWEFIDFGMDLAACIELIEX-PMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSN 563
Query: 534 RFSKPKLSR----TDFTILHYAGEVTYQANHFLDKNKD----YVVAEHQ-------ALLT 578
F KPK ++ F+++HYAG V Y + +L+ N D V+ +Q ALL
Sbjct: 564 NFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLALLF 623
Query: 579 AAKCSFVAGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLK 638
A A + + F+ L LM L +T PH++RC+ PN
Sbjct: 624 ATYGG-EAEGGGGKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNETXT 682
Query: 639 PSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGIL-APEVLEGNY-DDQV 696
P E+ V+ QLRC GVLE IRI G+P+R + +F R+ +L A + EG + D +
Sbjct: 683 PGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKK 742
Query: 697 ACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKE 754
A + +L + Y G T VF AG + L+ R + L Q + R ++ R E
Sbjct: 743 ASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQARCRGFLMRVE 802
Query: 755 F 755
+
Sbjct: 803 Y 803
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 275/781 (35%), Positives = 411/781 (52%), Gaps = 49/781 (6%)
Query: 11 SHVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKVFPEDTEAPAGGVDDMTKL 70
S V+V P +++ G + G V V G+ + +VF + ++DM +
Sbjct: 33 SSVFVVHPKQSFVXGTIQSXEGGXVTVXTEGGETLTVKEDQVFSMNPPX-YDXIEDMAMM 91
Query: 71 SYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSP 130
++LHEP VL NL RY IYTY+G + VNP+ LP +Y+ ++ Y+G E P
Sbjct: 92 THLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLP-VYNPXVVLAYRGKKRQEAPP 150
Query: 131 HVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG--------RSGV 182
H+F++ D AY+ M+ + ++ SIL++GESGAGKT T +++Y A + +SG
Sbjct: 151 HIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQSGK 210
Query: 183 EGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERS 242
T+E Q++ +NP+LEAFGNA TVRN+NSSRFG F+ I F G+++ A I TYLLE S
Sbjct: 211 MQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXS 270
Query: 243 RVCQISDPERNYHCFYLLCAAPHEDIAKYKL--GSPKSFHYLNQSNCYELDGVSDAHEYL 300
RV ER+YH FY + + ++ L +P +HY+++ + + D E +
Sbjct: 271 RVTFQLPAERSYHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSIDDQEELM 329
Query: 301 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGK-----EIDSSVIKDEKSRFHLN 355
AT A+DI+G S E AI+ + A++H GN+ F + + E D + + D +
Sbjct: 330 ATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLMGL 389
Query: 356 MTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEK 415
+AELL+ A + VT E ++ + V A LA +Y +F W+V +
Sbjct: 390 NSAELLK--ALCYPRVGVGNEAVTXGETVSEVHNSVGA------LAXAVYEXMFLWMVIR 441
Query: 416 INISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYT 475
IN + + IGVLDI GFE F NSFEQ CINFTNE LQQ FN H+F +EQEEY
Sbjct: 442 INQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYX 501
Query: 476 REEINWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLC-QTFAKNN 533
E I W +I+F +D ++LIE P GI ++L+E CMFPK+T +F L + K+N
Sbjct: 502 XEGIEWEFIDFGMDLAACIELIEX-PMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSN 560
Query: 534 RFSKPKLSR----TDFTILHYAGEVTYQANHFLDKNKD----YVVAEHQ-------ALLT 578
F KPK ++ F+++HYAG V Y + +L+ N D V+ +Q ALL
Sbjct: 561 NFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLALLF 620
Query: 579 AAKCSFVAGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLK 638
A A + + F+ L LM L +T PH++RC+ PN
Sbjct: 621 ATYGG-EAEGGGGKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNETXT 679
Query: 639 PSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGIL-APEVLEGNY-DDQV 696
P E+ V+ QLRC GVLE IRI G+P+R + +F R+ +L A + EG + D +
Sbjct: 680 PGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKK 739
Query: 697 ACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKE 754
A + +L + Y G T VF AG + L+ R + L Q + R ++ R E
Sbjct: 740 ASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQARCRGFLMRVE 799
Query: 755 F 755
+
Sbjct: 800 Y 800
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 38.9 bits (89), Expect = 0.022, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 732 AEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAA 787
A+ L A +IQ+ R ++ RK ++ ++ AA+ +Q ++RG AR + LRR AA
Sbjct: 1 ADKLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAA 56
Score = 35.0 bits (79), Expect = 0.30, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 785 AAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAA 835
AA ++IQ R ++ ++ YL ++ +A+ +Q +R AR + +RTKAA
Sbjct: 6 AACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAA 56
>pdb|2F6H|X Chain X, Myosin V Cargo Binding Domain
Length = 419
Score = 38.5 bits (88), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 1251 IVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGL 1310
I+ N+ M++ ++ + + V T + ++++ FN L+++R S+ G + +
Sbjct: 207 ILTFFNSIYWCMKSFHIENEVFHAVVTTLLNYVDAICFNELIMKRNFLSWKRGLQLNYNV 266
Query: 1311 AELEQWC--HDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQL 1368
LE+WC H T+ G+ + L+H+ Q L + + + + +I +C L+ QL
Sbjct: 267 TRLEEWCKTHGLTD---GT--ECLQHLIQTAKLLQVRKYTIEDI-DILRGICYSLTPAQL 320
Query: 1369 YRISTMY 1375
++ + Y
Sbjct: 321 QKLISQY 327
>pdb|3NDB|B Chain B, Crystal Structure Of A Signal Sequence Bound To The Signal
Recognition Particle
Length = 454
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 135 VGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG 177
+G+ A + +N K N IL+ G G+GKT T L RY+ G
Sbjct: 85 LGEEAKKLELNPKKQNVILLVGIQGSGKTTTAAKLARYIQKRG 127
>pdb|2V3C|C Chain C, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
pdb|2V3C|D Chain D, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
Length = 432
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 135 VGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG 177
+G+ A + +N K N IL+ G G+GKT T L RY+ G
Sbjct: 85 LGEEAKKLELNPKKQNVILLVGIQGSGKTTTAAKLARYIQKRG 127
>pdb|1KCF|A Chain A, Crystal Structure Of The Yeast Mitochondrial Holliday
Junction Resolvase, Ydc2
pdb|1KCF|B Chain B, Crystal Structure Of The Yeast Mitochondrial Holliday
Junction Resolvase, Ydc2
Length = 258
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 369 EDALIKRVMVTPEEVITRTL-------DPVNAVASRDALAKTIYSRLFDWIVEKINISIG 421
+D L++R++ +P +R L + AS++ +K I + +W VE + G
Sbjct: 24 KDELLRRIVDSPIYPTSRVLGIDLGIKNFSYCFASQNEDSKVI---IHNWSVENLTEKNG 80
Query: 422 QDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEY 474
LDI E F+ +S I N L + FN HV ME++ Y
Sbjct: 81 -----------LDIQWTEDFQPSSMADLSIQLFN-TLHEKFNPHVILMERQRY 121
>pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZM|B Chain B, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|A Chain A, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|B Chain B, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
Length = 283
Score = 31.2 bits (69), Expect = 4.2, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 384 ITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFE 439
+ R LD A +A +T L W ++ N+ I + + + I LD++GFE
Sbjct: 200 VGRLLDHPAVTAIAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFE 255
>pdb|3DZD|A Chain A, Crystal Structure Of Sigma54 Activator Ntrc4 In The
Inactive State
pdb|3DZD|B Chain B, Crystal Structure Of Sigma54 Activator Ntrc4 In The
Inactive State
Length = 368
Score = 30.8 bits (68), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 152 ILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAK 205
+L++GESG GK +++ RY G + ++ Q++ ES E FG+ K
Sbjct: 155 VLITGESGTGKEIVARLIHRYSGRKGAFVDLNCASIPQELAES----ELFGHEK 204
>pdb|3EAF|A Chain A, Crystal Structure Of Abc Transporter, Substrate Binding
Protein Aeropyrum Pernix
Length = 391
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 263 APHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFR 321
P D+ K Y LG+ +F Y N+ Y DGV Y+ A + + +E FR
Sbjct: 15 GPTSDVGKGYSLGAELAFKYFNEKGIYTKDGVRVNINYIKRDYAYNPTTAEEYYRE--FR 72
Query: 322 ---VVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELL 361
V AI+ G D K + V D+ + + +A+LL
Sbjct: 73 DRYGVIAIIGWGTADTEK---LSDQVDTDKITYISASYSAKLL 112
>pdb|3BBN|E Chain E, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 308
Score = 30.8 bits (68), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 697 ACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARR 731
A ++ DKKG G +GK K + A Q A +DARR
Sbjct: 176 AIVVVGDKKGQVGVGVGKAKEVVSAVQKAAVDARR 210
>pdb|2YO3|A Chain A, Salmonella Enterica Sada 1185-1386 Fused To Gcn4 Adaptors
(Sadak14)
pdb|2YO3|B Chain B, Salmonella Enterica Sada 1185-1386 Fused To Gcn4 Adaptors
(Sadak14)
pdb|2YO3|C Chain C, Salmonella Enterica Sada 1185-1386 Fused To Gcn4 Adaptors
(Sadak14)
Length = 268
Score = 30.4 bits (67), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 30/45 (66%)
Query: 926 KQAFTVSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLESE 970
++A T ++ K GE+ K+K E ++ +++D ++ + K+ ++E+E
Sbjct: 208 EEANTYTDQKMGEMNSKIKGVENKMKQIEDKIEEILSKIYHIENE 252
>pdb|3PVS|A Chain A, Structure And Biochemical Activities Of Escherichia Coli
Mgsa
pdb|3PVS|B Chain B, Structure And Biochemical Activities Of Escherichia Coli
Mgsa
pdb|3PVS|C Chain C, Structure And Biochemical Activities Of Escherichia Coli
Mgsa
pdb|3PVS|D Chain D, Structure And Biochemical Activities Of Escherichia Coli
Mgsa
Length = 447
Score = 30.4 bits (67), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 103 NPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGK 162
N FQ L + QY G H+ A G RA I G +S+++ G G GK
Sbjct: 11 NTFQPLAARMRPENLAQYIG------QQHLLAAGKPLPRA-IEAGHLHSMILWGPPGTGK 63
Query: 163 TETTKMLMRY 172
T +++ RY
Sbjct: 64 TTLAEVIARY 73
>pdb|4A64|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human Cul4b
At 2.57a Resolution
pdb|4A64|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human Cul4b
At 2.57a Resolution
pdb|4A64|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human Cul4b
At 2.57a Resolution
pdb|4A64|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human Cul4b
At 2.57a Resolution
Length = 354
Score = 30.0 bits (66), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 884 TGALQEAKNKL--EKRVEELTWRLQIEKRLRGLLQSQTQTADEAKQAF----TVSEAKNG 937
T LQ+ N L E R+++L+ Q+ R+RG +Q Q E +AF ++ K+
Sbjct: 251 TAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKDK 310
Query: 938 ELTKKLKDAEKRVDELQD 955
+ ++L D + +VD + D
Sbjct: 311 TMRQELDDFKDKVDHIID 328
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,639,907
Number of Sequences: 62578
Number of extensions: 1528740
Number of successful extensions: 5171
Number of sequences better than 100.0: 110
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 4437
Number of HSP's gapped (non-prelim): 186
length of query: 1456
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1345
effective length of database: 8,027,179
effective search space: 10796555755
effective search space used: 10796555755
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)