Query 000511
Match_columns 1455
No_of_seqs 700 out of 5620
Neff 7.8
Searched_HMMs 46136
Date Mon Apr 1 17:21:35 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000511.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000511hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 4E-258 1E-262 2450.1 141.8 1236 199-1454 123-1376(1381)
2 PLN03130 ABC transporter C fam 100.0 4E-210 8E-215 2127.7 165.7 1425 2-1455 7-1476(1622)
3 TIGR00957 MRP_assoc_pro multi 100.0 1E-209 3E-214 2129.1 169.6 1407 17-1455 23-1522(1522)
4 PLN03232 ABC transporter C fam 100.0 3E-206 7E-211 2092.6 165.3 1423 4-1455 9-1473(1495)
5 TIGR01271 CFTR_protein cystic 100.0 1E-194 2E-199 1975.6 147.7 1229 199-1454 4-1453(1490)
6 PTZ00243 ABC transporter; Prov 100.0 1E-184 2E-189 1875.6 149.8 1249 198-1454 59-1547(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 6E-146 1E-150 1374.6 108.5 1156 264-1454 14-1226(1228)
8 PTZ00265 multidrug resistance 100.0 4E-134 8E-139 1366.8 133.6 1163 265-1453 50-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 3E-89 6.4E-94 819.3 57.8 562 882-1454 135-705 (716)
10 COG2274 SunT ABC-type bacterio 100.0 4.1E-81 9E-86 784.3 65.6 547 900-1453 159-708 (709)
11 COG1132 MdlB ABC-type multidru 100.0 2.3E-77 5E-82 759.7 66.2 541 903-1454 22-565 (567)
12 PRK11174 cysteine/glutathione 100.0 2.9E-76 6.4E-81 753.8 70.5 563 885-1453 13-584 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 5.5E-76 1.2E-80 761.4 65.6 539 900-1450 166-711 (711)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.1E-75 4.6E-80 757.1 70.3 541 902-1453 143-685 (686)
15 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.5E-75 1.2E-79 756.7 66.5 540 903-1450 162-709 (710)
16 TIGR01193 bacteriocin_ABC ABC- 100.0 1.3E-74 2.9E-79 752.1 66.4 557 882-1451 144-707 (708)
17 PRK10790 putative multidrug tr 100.0 5.3E-74 1.1E-78 733.1 69.2 542 901-1453 29-575 (592)
18 PRK11176 lipid transporter ATP 100.0 1E-73 2.3E-78 730.0 67.8 543 903-1453 33-579 (582)
19 TIGR03375 type_I_sec_LssB type 100.0 3E-73 6.5E-78 737.9 68.0 530 902-1441 154-689 (694)
20 COG4988 CydD ABC-type transpor 100.0 4.1E-73 8.9E-78 670.1 62.3 513 933-1453 38-555 (559)
21 KOG0055 Multidrug/pheromone ex 100.0 3.7E-75 8E-80 734.3 47.6 516 933-1453 69-588 (1228)
22 PRK11160 cysteine/glutathione 100.0 1.9E-72 4E-77 713.2 67.6 504 941-1452 66-573 (574)
23 COG4987 CydC ABC-type transpor 100.0 7.8E-73 1.7E-77 654.6 57.9 499 944-1451 67-571 (573)
24 TIGR02203 MsbA_lipidA lipid A 100.0 2.4E-72 5.2E-77 716.7 68.0 544 902-1453 21-568 (571)
25 TIGR01846 type_I_sec_HlyB type 100.0 7.3E-72 1.6E-76 724.2 68.8 541 905-1453 149-692 (694)
26 KOG0056 Heavy metal exporter H 100.0 4.2E-74 9.2E-79 645.7 37.3 493 949-1452 273-773 (790)
27 COG2274 SunT ABC-type bacterio 100.0 6.2E-71 1.3E-75 692.5 68.0 543 264-825 143-703 (709)
28 PRK13657 cyclic beta-1,2-gluca 100.0 2E-70 4.3E-75 699.1 70.9 545 900-1454 24-571 (588)
29 KOG0058 Peptide exporter, ABC 100.0 3.4E-71 7.4E-76 663.9 59.2 536 267-820 139-693 (716)
30 TIGR02204 MsbA_rel ABC transpo 100.0 1.9E-70 4.1E-75 699.6 68.0 546 903-1453 26-575 (576)
31 TIGR02868 CydC thiol reductant 100.0 1.9E-70 4.1E-75 691.7 62.4 463 944-1412 62-529 (529)
32 KOG0057 Mitochondrial Fe/S clu 100.0 3.9E-70 8.4E-75 632.1 56.2 505 935-1453 74-586 (591)
33 PRK11174 cysteine/glutathione 100.0 2.3E-69 5E-74 690.3 68.4 534 266-824 13-578 (588)
34 PRK10789 putative multidrug tr 100.0 1.2E-69 2.5E-74 687.6 63.9 509 936-1453 37-550 (569)
35 TIGR01192 chvA glucan exporter 100.0 9.7E-69 2.1E-73 680.1 70.1 542 902-1454 26-571 (585)
36 TIGR02857 CydD thiol reductant 100.0 1.1E-68 2.3E-73 675.9 64.0 515 902-1424 10-529 (529)
37 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2E-67 4.2E-72 682.7 69.6 537 264-823 125-678 (686)
38 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.9E-67 6.2E-72 684.3 70.4 544 266-823 145-705 (710)
39 TIGR03375 type_I_sec_LssB type 100.0 1.1E-66 2.4E-71 676.5 71.5 535 265-819 137-689 (694)
40 TIGR00958 3a01208 Conjugate Tr 100.0 2.2E-66 4.8E-71 671.9 71.0 535 270-823 156-707 (711)
41 TIGR01842 type_I_sec_PrtD type 100.0 1.3E-66 2.8E-71 657.6 66.2 523 903-1440 14-542 (544)
42 PTZ00265 multidrug resistance 100.0 8.2E-67 1.8E-71 709.3 66.6 555 894-1453 59-728 (1466)
43 COG5265 ATM1 ABC-type transpor 100.0 9.6E-69 2.1E-73 600.8 37.3 487 958-1451 5-496 (497)
44 COG1123 ATPase components of v 100.0 6.6E-68 1.4E-72 629.9 46.4 475 601-1452 5-531 (539)
45 TIGR01193 bacteriocin_ABC ABC- 100.0 9.3E-66 2E-70 669.3 70.2 535 268-823 149-702 (708)
46 PRK11176 lipid transporter ATP 100.0 1.2E-64 2.5E-69 646.7 68.9 539 267-824 17-573 (582)
47 TIGR02203 MsbA_lipidA lipid A 100.0 2.1E-64 4.6E-69 643.6 68.0 535 267-820 6-558 (571)
48 PRK10261 glutathione transport 100.0 3.8E-66 8.2E-71 658.7 49.2 492 599-1451 10-565 (623)
49 TIGR02204 MsbA_rel ABC transpo 100.0 2E-63 4.4E-68 634.9 68.8 541 265-821 8-566 (576)
50 TIGR02868 CydC thiol reductant 100.0 1.8E-63 3.8E-68 628.3 67.0 504 268-790 6-529 (529)
51 PRK10790 putative multidrug tr 100.0 2.2E-63 4.8E-68 635.3 68.5 532 268-825 16-570 (592)
52 TIGR01846 type_I_sec_HlyB type 100.0 6.5E-63 1.4E-67 640.6 69.8 540 265-824 129-686 (694)
53 PRK15134 microcin C ABC transp 100.0 2E-65 4.4E-70 644.0 43.7 455 601-1443 5-518 (529)
54 TIGR01194 cyc_pep_trnsptr cycl 100.0 3.1E-63 6.8E-68 626.5 62.8 510 903-1432 26-551 (555)
55 PRK13549 xylose transporter AT 100.0 2.5E-65 5.4E-70 639.8 42.9 443 601-1439 5-493 (506)
56 PRK11160 cysteine/glutathione 100.0 2E-62 4.3E-67 621.7 68.2 534 269-824 10-568 (574)
57 TIGR01842 type_I_sec_PrtD type 100.0 2E-62 4.4E-67 619.4 67.6 520 272-818 3-542 (544)
58 TIGR03269 met_CoM_red_A2 methy 100.0 5.7E-65 1.2E-69 639.1 42.7 437 602-1440 1-517 (520)
59 PRK13657 cyclic beta-1,2-gluca 100.0 3.5E-62 7.6E-67 623.3 68.8 532 269-824 13-564 (588)
60 PRK09700 D-allose transporter 100.0 1.2E-64 2.6E-69 634.7 44.3 446 601-1437 5-495 (510)
61 TIGR00956 3a01205 Pleiotropic 100.0 1.7E-63 3.7E-68 677.0 58.7 246 1180-1437 718-990 (1394)
62 PRK10789 putative multidrug tr 100.0 2.9E-62 6.2E-67 620.2 66.0 522 284-824 4-544 (569)
63 PLN03232 ABC transporter C fam 100.0 2.2E-62 4.8E-67 673.2 68.0 547 883-1453 290-840 (1495)
64 PRK10762 D-ribose transporter 100.0 1.6E-64 3.4E-69 631.8 42.5 436 601-1439 4-483 (501)
65 COG4618 ArpD ABC-type protease 100.0 8.6E-63 1.9E-67 564.9 52.0 530 263-819 11-561 (580)
66 PLN03130 ABC transporter C fam 100.0 5.6E-62 1.2E-66 668.1 68.6 470 960-1453 366-840 (1622)
67 COG1132 MdlB ABC-type multidru 100.0 1.3E-61 2.8E-66 615.5 66.5 527 273-825 13-559 (567)
68 PRK15439 autoinducer 2 ABC tra 100.0 4.6E-64 9.9E-69 627.9 42.3 451 600-1441 10-493 (510)
69 TIGR02633 xylG D-xylose ABC tr 100.0 6.4E-64 1.4E-68 627.2 43.0 447 602-1438 2-490 (500)
70 TIGR01257 rim_protein retinal- 100.0 1.5E-61 3.2E-66 652.0 67.8 220 1216-1441 1935-2160(2272)
71 TIGR02857 CydD thiol reductant 100.0 3E-61 6.6E-66 608.0 66.1 507 274-802 2-529 (529)
72 PRK15064 ABC transporter ATP-b 100.0 1.3E-62 2.8E-67 618.8 53.1 202 1217-1442 318-527 (530)
73 PRK11288 araG L-arabinose tran 100.0 1.7E-63 3.7E-68 622.5 42.8 443 601-1439 4-484 (501)
74 COG4988 CydD ABC-type transpor 100.0 6.2E-61 1.3E-65 566.8 62.0 523 281-826 6-551 (559)
75 TIGR01192 chvA glucan exporter 100.0 2E-60 4.3E-65 604.1 70.2 532 269-824 13-564 (585)
76 PRK10982 galactose/methyl gala 100.0 7E-63 1.5E-67 616.0 43.2 435 605-1439 2-479 (491)
77 PRK10522 multidrug transporter 100.0 9E-61 2E-65 604.3 62.6 468 949-1440 62-539 (547)
78 PRK11819 putative ABC transpor 100.0 4E-61 8.7E-66 606.9 53.2 203 1216-1442 322-535 (556)
79 PRK10938 putative molybdenum t 100.0 2.6E-62 5.5E-67 611.2 41.1 442 602-1433 4-485 (490)
80 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 8.3E-61 1.8E-65 604.1 51.4 480 601-1441 4-532 (552)
81 COG4172 ABC-type uncharacteriz 100.0 9.3E-61 2E-65 531.7 40.8 459 600-1449 5-525 (534)
82 TIGR00957 MRP_assoc_pro multi 100.0 1E-58 2.2E-63 637.9 67.7 545 264-824 953-1514(1522)
83 KOG0057 Mitochondrial Fe/S clu 100.0 9.7E-59 2.1E-63 537.4 55.0 512 285-820 40-576 (591)
84 PRK10636 putative ABC transpor 100.0 1.6E-59 3.4E-64 598.1 52.6 200 1217-1440 311-517 (638)
85 PRK11147 ABC transporter ATPas 100.0 2.6E-58 5.6E-63 588.8 50.7 199 1218-1440 319-528 (635)
86 PLN03140 ABC transporter G fam 100.0 1.3E-57 2.8E-62 615.9 57.9 211 1218-1436 867-1106(1470)
87 KOG0054 Multidrug resistance-a 100.0 1.1E-56 2.4E-61 581.4 62.8 547 884-1452 191-742 (1381)
88 COG4618 ArpD ABC-type protease 100.0 1.2E-57 2.5E-62 522.8 46.9 481 941-1441 69-561 (580)
89 COG4987 CydC ABC-type transpor 100.0 3.7E-56 8.1E-61 515.9 58.5 539 266-825 8-568 (573)
90 PTZ00243 ABC transporter; Prov 100.0 3.8E-56 8.3E-61 610.2 67.9 471 343-819 1026-1534(1560)
91 PLN03073 ABC transporter F fam 100.0 7E-57 1.5E-61 573.9 51.6 199 1217-1439 507-713 (718)
92 TIGR01194 cyc_pep_trnsptr cycl 100.0 2.9E-55 6.2E-60 554.1 61.7 522 269-810 11-551 (555)
93 KOG0056 Heavy metal exporter H 100.0 3.2E-57 6.9E-62 509.7 37.8 520 283-824 223-768 (790)
94 COG0488 Uup ATPase components 100.0 2.5E-56 5.5E-61 544.0 47.4 484 601-1442 3-527 (530)
95 TIGR00954 3a01203 Peroxysomal 100.0 8E-55 1.7E-59 556.9 55.4 513 896-1426 97-653 (659)
96 PRK13409 putative ATPase RIL; 100.0 3.5E-56 7.6E-61 558.7 38.4 191 1218-1434 340-536 (590)
97 TIGR01271 CFTR_protein cystic 100.0 2.6E-53 5.6E-58 582.5 67.4 539 883-1450 69-645 (1490)
98 PRK10522 multidrug transporter 100.0 9.9E-53 2.2E-57 531.1 62.1 508 265-810 3-530 (547)
99 COG1129 MglA ABC-type sugar tr 100.0 1.5E-53 3.3E-58 504.4 39.9 442 600-1437 7-487 (500)
100 TIGR00954 3a01203 Peroxysomal 100.0 3.6E-50 7.7E-55 514.1 59.5 516 276-804 97-653 (659)
101 cd03289 ABCC_CFTR2 The CFTR su 100.0 2E-52 4.3E-57 478.4 27.4 236 1217-1454 1-238 (275)
102 COG5265 ATM1 ABC-type transpor 100.0 8E-51 1.7E-55 456.7 37.3 467 342-825 9-493 (497)
103 COG3845 ABC-type uncharacteriz 100.0 9E-51 1.9E-55 468.9 36.7 442 600-1437 3-489 (501)
104 PRK14257 phosphate ABC transpo 100.0 7.5E-49 1.6E-53 460.3 27.7 229 1211-1444 73-317 (329)
105 COG1126 GlnQ ABC-type polar am 100.0 3.6E-46 7.9E-51 388.5 23.2 220 1218-1444 2-229 (240)
106 COG1135 AbcC ABC-type metal io 100.0 2.3E-45 5E-50 401.3 21.9 220 1219-1443 2-234 (339)
107 COG1117 PstB ABC-type phosphat 100.0 3E-45 6.5E-50 379.0 19.1 220 1217-1443 6-240 (253)
108 cd03288 ABCC_SUR2 The SUR doma 100.0 4.9E-44 1.1E-48 408.8 29.1 238 1215-1452 16-255 (257)
109 KOG0927 Predicted transporter 100.0 2.4E-44 5.1E-49 415.6 26.3 196 1218-1435 389-591 (614)
110 COG1125 OpuBA ABC-type proline 100.0 4.7E-44 1E-48 378.8 21.1 223 1219-1448 2-233 (309)
111 cd03252 ABCC_Hemolysin The ABC 100.0 4.6E-43 1E-47 396.7 28.0 233 1219-1452 1-236 (237)
112 PRK14257 phosphate ABC transpo 100.0 2.2E-43 4.7E-48 414.2 22.4 262 524-818 23-313 (329)
113 cd03244 ABCC_MRP_domain2 Domai 100.0 1.1E-42 2.5E-47 389.3 26.4 219 1217-1435 1-221 (221)
114 KOG0062 ATPase component of AB 100.0 2.8E-42 6.1E-47 396.5 23.9 192 1216-1431 360-559 (582)
115 cd03369 ABCC_NFT1 Domain 2 of 100.0 6.1E-42 1.3E-46 379.2 25.5 207 1213-1435 1-207 (207)
116 PRK13631 cbiO cobalt transport 100.0 6.8E-42 1.5E-46 400.4 26.9 223 1215-1442 18-267 (320)
117 TIGR02314 ABC_MetN D-methionin 100.0 7.7E-42 1.7E-46 401.4 26.8 223 1219-1446 2-236 (343)
118 cd03251 ABCC_MsbA MsbA is an e 100.0 1.1E-41 2.4E-46 384.8 26.4 229 1219-1448 1-232 (234)
119 COG1120 FepC ABC-type cobalami 100.0 3.8E-42 8.1E-47 379.2 20.2 213 1218-1441 2-229 (258)
120 cd03254 ABCC_Glucan_exporter_l 100.0 2.3E-41 5.1E-46 380.8 26.7 225 1217-1442 1-228 (229)
121 COG1124 DppF ABC-type dipeptid 100.0 8.7E-42 1.9E-46 363.8 21.3 226 1218-1451 3-242 (252)
122 cd03253 ABCC_ATM1_transporter 100.0 4.1E-41 9E-46 380.6 27.7 232 1219-1452 1-235 (236)
123 KOG0065 Pleiotropic drug resis 100.0 8.7E-41 1.9E-45 421.7 32.1 199 1231-1437 802-1018(1391)
124 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.4E-41 3.1E-46 372.4 21.6 210 1218-1442 4-229 (254)
125 COG3839 MalK ABC-type sugar tr 100.0 3.4E-41 7.4E-46 385.4 24.3 221 1218-1447 3-230 (338)
126 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 7E-41 1.5E-45 379.2 26.7 231 1219-1450 1-235 (238)
127 COG1127 Ttg2A ABC-type transpo 100.0 4.6E-41 9.9E-46 355.8 23.4 229 1216-1451 6-246 (263)
128 COG1126 GlnQ ABC-type polar am 100.0 1.1E-41 2.3E-46 355.2 17.9 200 601-818 2-225 (240)
129 PRK14250 phosphate ABC transpo 100.0 1E-40 2.2E-45 377.9 26.7 226 1218-1451 3-232 (241)
130 COG1122 CbiO ABC-type cobalt t 100.0 5.2E-41 1.1E-45 371.3 22.7 215 1218-1442 3-230 (235)
131 cd03245 ABCC_bacteriocin_expor 100.0 1.3E-40 2.9E-45 372.4 25.7 217 1217-1433 1-220 (220)
132 cd03261 ABC_Org_Solvent_Resist 100.0 1E-40 2.2E-45 376.9 25.0 217 1219-1442 1-228 (235)
133 PRK11153 metN DL-methionine tr 100.0 2E-40 4.4E-45 392.6 27.6 224 1219-1447 2-237 (343)
134 cd03260 ABC_PstB_phosphate_tra 100.0 1.3E-40 2.8E-45 374.2 22.5 213 1219-1438 1-227 (227)
135 PRK14269 phosphate ABC transpo 100.0 4.3E-40 9.2E-45 374.2 26.3 219 1218-1443 2-233 (246)
136 PRK13650 cbiO cobalt transport 100.0 3.7E-40 7.9E-45 380.8 26.0 220 1218-1442 4-231 (279)
137 COG1136 SalX ABC-type antimicr 100.0 2.5E-40 5.4E-45 357.9 22.8 208 1219-1431 2-222 (226)
138 COG3638 ABC-type phosphate/pho 100.0 1.8E-40 3.8E-45 350.5 21.0 221 1218-1451 3-245 (258)
139 PRK13637 cbiO cobalt transport 100.0 3.5E-40 7.6E-45 382.3 25.6 218 1219-1441 3-235 (287)
140 PRK11432 fbpC ferric transport 100.0 4.6E-40 1E-44 388.5 27.0 222 1217-1447 5-233 (351)
141 cd03219 ABC_Mj1267_LivG_branch 100.0 2.1E-40 4.7E-45 374.8 23.2 222 1219-1442 1-234 (236)
142 PRK11650 ugpC glycerol-3-phosp 100.0 4E-40 8.7E-45 390.2 26.1 222 1218-1447 3-231 (356)
143 cd03263 ABC_subfamily_A The AB 100.0 2.3E-40 4.9E-45 370.4 22.7 214 1219-1438 1-219 (220)
144 TIGR03265 PhnT2 putative 2-ami 100.0 5.4E-40 1.2E-44 388.7 26.4 221 1218-1447 4-231 (353)
145 PRK10744 pstB phosphate transp 100.0 6.1E-40 1.3E-44 375.9 25.7 221 1216-1443 11-247 (260)
146 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.4E-40 9.5E-45 373.3 24.2 226 1219-1450 1-236 (242)
147 PRK13646 cbiO cobalt transport 100.0 5.1E-40 1.1E-44 381.0 25.2 219 1218-1441 2-236 (286)
148 cd03296 ABC_CysA_sulfate_impor 100.0 7.3E-40 1.6E-44 370.8 25.8 216 1219-1443 3-229 (239)
149 TIGR00972 3a0107s01c2 phosphat 100.0 6.7E-40 1.4E-44 373.0 25.2 221 1219-1446 2-238 (247)
150 cd03224 ABC_TM1139_LivF_branch 100.0 4.2E-40 9E-45 368.9 23.2 215 1219-1440 1-221 (222)
151 PRK14273 phosphate ABC transpo 100.0 6.4E-40 1.4E-44 374.7 25.0 223 1217-1446 6-244 (254)
152 PRK13643 cbiO cobalt transport 100.0 8.9E-40 1.9E-44 379.0 25.9 218 1219-1441 2-234 (288)
153 cd03258 ABC_MetN_methionine_tr 100.0 4.8E-40 1E-44 371.1 22.7 219 1219-1442 2-232 (233)
154 cd03248 ABCC_TAP TAP, the Tran 100.0 7.4E-40 1.6E-44 367.8 23.7 215 1215-1429 8-226 (226)
155 cd03256 ABC_PhnC_transporter A 100.0 6.2E-40 1.3E-44 372.3 23.2 215 1219-1440 1-234 (241)
156 TIGR01186 proV glycine betaine 100.0 6.3E-40 1.4E-44 387.0 24.1 209 1233-1446 6-225 (363)
157 PRK13632 cbiO cobalt transport 100.0 1.1E-39 2.5E-44 375.6 25.7 220 1218-1442 7-233 (271)
158 PRK14242 phosphate transporter 100.0 8.2E-40 1.8E-44 373.8 24.2 219 1218-1443 6-240 (253)
159 PRK14259 phosphate ABC transpo 100.0 1.2E-39 2.5E-44 374.9 25.6 223 1214-1443 9-256 (269)
160 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1E-39 2.2E-44 368.9 24.6 215 1219-1441 2-222 (236)
161 COG4615 PvdE ABC-type sideroph 100.0 3.8E-37 8.3E-42 341.9 44.0 469 941-1433 54-530 (546)
162 cd03289 ABCC_CFTR2 The CFTR su 100.0 5.1E-40 1.1E-44 376.1 22.0 218 601-825 2-232 (275)
163 PRK10851 sulfate/thiosulfate t 100.0 1.9E-39 4.1E-44 384.1 27.5 220 1218-1446 2-232 (353)
164 PRK13635 cbiO cobalt transport 100.0 1.5E-39 3.4E-44 375.3 26.0 219 1218-1441 5-230 (279)
165 PRK13647 cbiO cobalt transport 100.0 1.4E-39 3E-44 375.1 25.3 212 1218-1439 4-226 (274)
166 COG3842 PotA ABC-type spermidi 100.0 3.4E-40 7.4E-45 379.2 20.1 218 1217-1447 4-233 (352)
167 PRK13636 cbiO cobalt transport 100.0 1.8E-39 4E-44 375.7 26.2 218 1218-1441 5-232 (283)
168 PRK14267 phosphate ABC transpo 100.0 1.1E-39 2.3E-44 372.9 23.8 224 1218-1448 4-245 (253)
169 PRK11629 lolD lipoprotein tran 100.0 2.2E-39 4.9E-44 365.4 26.1 212 1218-1434 5-228 (233)
170 COG4178 ABC-type uncharacteriz 100.0 8.8E-37 1.9E-41 368.4 50.0 493 909-1425 57-587 (604)
171 TIGR02315 ABC_phnC phosphonate 100.0 1.2E-39 2.7E-44 370.3 24.1 220 1219-1439 2-234 (243)
172 PRK13537 nodulation ABC transp 100.0 1.1E-39 2.4E-44 380.5 24.1 217 1217-1441 6-228 (306)
173 PRK13634 cbiO cobalt transport 100.0 1.4E-39 3.1E-44 377.7 24.8 218 1219-1441 3-236 (290)
174 PRK14235 phosphate transporter 100.0 2E-39 4.4E-44 372.7 25.8 222 1215-1443 16-254 (267)
175 COG2884 FtsE Predicted ATPase 100.0 7.1E-40 1.5E-44 333.3 19.2 207 1219-1435 2-221 (223)
176 TIGR03258 PhnT 2-aminoethylpho 100.0 1.3E-39 2.8E-44 385.8 24.5 222 1216-1446 3-234 (362)
177 TIGR00960 3a0501s02 Type II (G 100.0 1E-39 2.2E-44 364.1 21.8 202 1219-1429 2-216 (216)
178 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 8.1E-40 1.8E-44 365.5 20.7 206 1219-1429 1-218 (218)
179 PRK14247 phosphate ABC transpo 100.0 2.8E-39 6E-44 368.7 25.5 226 1218-1450 3-244 (250)
180 COG1135 AbcC ABC-type metal io 100.0 4.3E-40 9.3E-45 360.0 17.8 205 602-818 2-231 (339)
181 PRK15079 oligopeptide ABC tran 100.0 2E-39 4.3E-44 381.1 24.8 226 1218-1448 8-259 (331)
182 COG1116 TauB ABC-type nitrate/ 100.0 2.1E-39 4.5E-44 349.7 22.8 196 1218-1429 3-211 (248)
183 cd03259 ABC_Carb_Solutes_like 100.0 1E-39 2.2E-44 363.3 20.9 206 1219-1433 1-213 (213)
184 PRK13651 cobalt transporter AT 100.0 3.3E-39 7.2E-44 375.7 26.2 219 1218-1441 2-255 (305)
185 PRK13642 cbiO cobalt transport 100.0 3E-39 6.6E-44 373.0 25.5 220 1218-1442 4-231 (277)
186 TIGR03411 urea_trans_UrtD urea 100.0 2.5E-39 5.5E-44 367.4 24.3 220 1218-1440 2-231 (242)
187 PRK11831 putative ABC transpor 100.0 2.3E-39 4.9E-44 372.7 24.2 227 1218-1451 7-244 (269)
188 cd03218 ABC_YhbG The ABC trans 100.0 1.4E-39 3E-44 367.2 22.0 216 1219-1441 1-223 (232)
189 PRK09452 potA putrescine/sperm 100.0 3.8E-39 8.2E-44 383.1 26.7 221 1217-1446 13-240 (375)
190 PRK14251 phosphate ABC transpo 100.0 2.1E-39 4.6E-44 370.0 23.6 223 1218-1447 4-242 (251)
191 cd03291 ABCC_CFTR1 The CFTR su 100.0 9.3E-39 2E-43 367.1 29.0 217 1216-1450 37-256 (282)
192 PRK11000 maltose/maltodextrin 100.0 2.8E-39 6.1E-44 385.8 25.4 220 1218-1446 3-229 (369)
193 PRK11264 putative amino-acid A 100.0 6.5E-39 1.4E-43 365.8 27.3 227 1218-1451 3-245 (250)
194 PRK09493 glnQ glutamine ABC tr 100.0 4.5E-39 9.7E-44 364.7 25.7 217 1219-1442 2-227 (240)
195 PRK10619 histidine/lysine/argi 100.0 3.9E-39 8.3E-44 368.8 25.2 221 1216-1443 3-244 (257)
196 cd03247 ABCC_cytochrome_bd The 100.0 2E-39 4.4E-44 350.0 21.6 178 1219-1433 1-178 (178)
197 TIGR03005 ectoine_ehuA ectoine 100.0 6.2E-39 1.3E-43 366.2 26.8 218 1219-1443 1-239 (252)
198 cd03266 ABC_NatA_sodium_export 100.0 1.8E-39 3.9E-44 362.7 21.9 209 1219-1433 2-218 (218)
199 COG3840 ThiQ ABC-type thiamine 100.0 2.1E-39 4.6E-44 326.6 20.1 211 1219-1444 2-223 (231)
200 TIGR02211 LolD_lipo_ex lipopro 100.0 2.3E-39 5E-44 362.6 22.7 207 1219-1430 2-220 (221)
201 PRK14237 phosphate transporter 100.0 4.4E-39 9.5E-44 369.9 25.6 220 1217-1443 19-254 (267)
202 PRK13640 cbiO cobalt transport 100.0 4.4E-39 9.5E-44 372.4 25.3 220 1217-1441 4-233 (282)
203 PRK09536 btuD corrinoid ABC tr 100.0 5.1E-39 1.1E-43 383.7 26.6 220 1218-1450 3-236 (402)
204 PRK14245 phosphate ABC transpo 100.0 3.1E-39 6.7E-44 368.2 23.6 220 1218-1444 3-238 (250)
205 COG1116 TauB ABC-type nitrate/ 100.0 1.1E-39 2.4E-44 351.8 18.8 191 601-808 3-212 (248)
206 PRK13648 cbiO cobalt transport 100.0 5.1E-39 1.1E-43 370.0 25.4 220 1218-1442 7-233 (269)
207 PRK11308 dppF dipeptide transp 100.0 4.9E-39 1.1E-43 377.5 25.7 226 1218-1448 5-252 (327)
208 PRK13649 cbiO cobalt transport 100.0 4.2E-39 9.2E-44 373.0 24.7 218 1219-1441 3-235 (280)
209 PRK14239 phosphate transporter 100.0 3.5E-39 7.6E-44 368.5 23.7 219 1218-1443 5-239 (252)
210 cd03250 ABCC_MRP_domain1 Domai 100.0 4E-39 8.7E-44 355.9 23.4 197 1219-1428 1-204 (204)
211 PRK14240 phosphate transporter 100.0 4.2E-39 9.2E-44 367.2 24.3 221 1217-1444 2-238 (250)
212 PRK13645 cbiO cobalt transport 100.0 3.9E-39 8.5E-44 374.6 24.4 221 1216-1441 4-241 (289)
213 PRK14244 phosphate ABC transpo 100.0 3.1E-39 6.7E-44 368.4 23.1 221 1219-1446 6-243 (251)
214 PRK14268 phosphate ABC transpo 100.0 4.5E-39 9.7E-44 368.4 24.3 223 1217-1446 11-248 (258)
215 PRK14262 phosphate ABC transpo 100.0 4E-39 8.7E-44 367.5 23.7 226 1218-1450 3-244 (250)
216 PRK14274 phosphate ABC transpo 100.0 5.9E-39 1.3E-43 367.7 25.2 221 1218-1445 12-248 (259)
217 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5E-39 1.1E-43 369.6 24.6 221 1220-1447 26-257 (269)
218 PRK14248 phosphate ABC transpo 100.0 5.7E-39 1.2E-43 369.6 24.9 219 1218-1443 21-255 (268)
219 PRK14238 phosphate transporter 100.0 9.4E-39 2E-43 367.7 26.7 221 1216-1443 22-258 (271)
220 PRK14256 phosphate ABC transpo 100.0 6.3E-39 1.4E-43 366.2 24.9 222 1216-1444 2-240 (252)
221 PRK11022 dppD dipeptide transp 100.0 4.6E-39 1E-43 378.0 24.3 222 1218-1448 3-251 (326)
222 TIGR02769 nickel_nikE nickel i 100.0 9.2E-39 2E-43 367.0 26.1 227 1218-1449 2-249 (265)
223 PRK11607 potG putrescine trans 100.0 9.1E-39 2E-43 380.6 26.9 222 1217-1447 18-246 (377)
224 cd03225 ABC_cobalt_CbiO_domain 100.0 3.6E-39 7.7E-44 358.4 21.9 204 1220-1428 1-211 (211)
225 PRK10895 lipopolysaccharide AB 100.0 5.8E-39 1.3E-43 364.0 24.1 217 1218-1441 3-227 (241)
226 cd03264 ABC_drug_resistance_li 100.0 4.6E-39 1E-43 357.4 22.7 202 1219-1433 1-211 (211)
227 TIGR03410 urea_trans_UrtE urea 100.0 3.5E-39 7.5E-44 363.4 21.9 211 1219-1439 1-220 (230)
228 PRK11124 artP arginine transpo 100.0 1.1E-38 2.4E-43 362.0 26.2 218 1219-1443 3-233 (242)
229 PRK13652 cbiO cobalt transport 100.0 7.7E-39 1.7E-43 369.7 25.2 218 1218-1441 3-228 (277)
230 PRK13644 cbiO cobalt transport 100.0 8.5E-39 1.8E-43 368.5 25.5 217 1219-1441 2-225 (274)
231 cd03265 ABC_DrrA DrrA is the A 100.0 4.5E-39 9.6E-44 359.8 22.4 208 1219-1438 1-219 (220)
232 PRK14249 phosphate ABC transpo 100.0 7.7E-39 1.7E-43 365.2 24.7 220 1217-1443 3-238 (251)
233 PRK11614 livF leucine/isoleuci 100.0 6.6E-39 1.4E-43 362.7 23.9 217 1218-1441 5-227 (237)
234 PRK14270 phosphate ABC transpo 100.0 9.1E-39 2E-43 364.6 25.0 218 1218-1442 4-237 (251)
235 PRK14260 phosphate ABC transpo 100.0 6.4E-39 1.4E-43 367.3 23.8 221 1217-1444 6-247 (259)
236 PRK13641 cbiO cobalt transport 100.0 9.5E-39 2.1E-43 370.6 25.3 219 1218-1441 2-235 (287)
237 PRK14236 phosphate transporter 100.0 1.2E-38 2.6E-43 367.2 26.0 221 1216-1443 23-259 (272)
238 PRK09473 oppD oligopeptide tra 100.0 1.7E-38 3.7E-43 373.4 27.7 226 1218-1448 12-259 (330)
239 cd03257 ABC_NikE_OppD_transpor 100.0 5.4E-39 1.2E-43 361.5 22.5 211 1219-1433 2-228 (228)
240 PRK14266 phosphate ABC transpo 100.0 8.5E-39 1.8E-43 364.8 24.4 222 1218-1446 3-240 (250)
241 PRK14261 phosphate ABC transpo 100.0 8.6E-39 1.9E-43 365.2 24.4 226 1218-1450 6-247 (253)
242 cd03226 ABC_cobalt_CbiO_domain 100.0 5E-39 1.1E-43 355.4 21.4 198 1220-1430 1-205 (205)
243 PRK13633 cobalt transporter AT 100.0 1.2E-38 2.6E-43 368.6 25.2 220 1218-1442 4-235 (280)
244 PRK14243 phosphate transporter 100.0 1.4E-38 3.1E-43 365.1 25.5 219 1218-1443 10-251 (264)
245 PRK14271 phosphate ABC transpo 100.0 4.3E-38 9.3E-43 362.8 29.5 219 1218-1443 21-254 (276)
246 TIGR01288 nodI ATP-binding ABC 100.0 8.3E-39 1.8E-43 374.0 23.9 216 1218-1441 4-225 (303)
247 PRK14254 phosphate ABC transpo 100.0 1.5E-38 3.3E-43 367.9 25.9 220 1217-1443 38-272 (285)
248 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.7E-39 1E-43 359.6 20.9 207 1219-1435 1-218 (220)
249 PRK14252 phosphate ABC transpo 100.0 1.4E-38 3E-43 365.8 25.1 223 1213-1442 11-251 (265)
250 cd03301 ABC_MalK_N The N-termi 100.0 6.9E-39 1.5E-43 356.7 21.7 206 1219-1433 1-213 (213)
251 TIGR00968 3a0106s01 sulfate AB 100.0 1.5E-38 3.2E-43 359.4 24.7 215 1219-1442 1-222 (237)
252 PRK10070 glycine betaine trans 100.0 1.6E-38 3.4E-43 379.3 26.1 208 1234-1446 42-260 (400)
253 PRK11701 phnK phosphonate C-P 100.0 3E-38 6.6E-43 361.7 27.4 225 1218-1449 6-250 (258)
254 PRK13536 nodulation factor exp 100.0 1.1E-38 2.4E-43 375.6 24.4 216 1218-1441 41-262 (340)
255 TIGR03522 GldA_ABC_ATP gliding 100.0 1.2E-38 2.6E-43 372.0 24.5 215 1219-1441 3-222 (301)
256 cd03268 ABC_BcrA_bacitracin_re 100.0 5.1E-39 1.1E-43 356.2 20.2 202 1219-1433 1-208 (208)
257 PRK11231 fecE iron-dicitrate t 100.0 1.2E-38 2.5E-43 364.5 23.6 216 1219-1441 3-228 (255)
258 PRK10575 iron-hydroxamate tran 100.0 1.2E-38 2.6E-43 366.0 23.6 213 1218-1441 11-238 (265)
259 cd03246 ABCC_Protease_Secretio 100.0 1.1E-38 2.4E-43 342.6 21.7 172 1219-1429 1-173 (173)
260 cd03292 ABC_FtsE_transporter F 100.0 7.7E-39 1.7E-43 356.6 21.2 205 1219-1429 1-214 (214)
261 PRK13639 cbiO cobalt transport 100.0 2.2E-38 4.7E-43 365.5 25.2 217 1219-1441 2-227 (275)
262 PRK13638 cbiO cobalt transport 100.0 1.6E-38 3.6E-43 366.2 23.9 217 1219-1442 2-227 (271)
263 PRK11300 livG leucine/isoleuci 100.0 2.1E-38 4.6E-43 362.7 24.6 220 1218-1441 5-244 (255)
264 PRK14272 phosphate ABC transpo 100.0 1.9E-38 4.2E-43 362.4 24.2 224 1218-1448 4-244 (252)
265 PRK14241 phosphate transporter 100.0 1.9E-38 4.2E-43 363.3 24.0 219 1218-1443 4-245 (258)
266 TIGR03415 ABC_choXWV_ATP choli 100.0 1.9E-38 4.1E-43 375.8 24.6 208 1234-1446 38-260 (382)
267 PRK14253 phosphate ABC transpo 100.0 2.1E-38 4.5E-43 361.4 24.0 219 1218-1443 3-236 (249)
268 PRK14275 phosphate ABC transpo 100.0 2.1E-38 4.6E-43 367.2 24.4 225 1216-1447 37-277 (286)
269 PRK14263 phosphate ABC transpo 100.0 2.6E-38 5.6E-43 361.9 24.7 223 1218-1447 8-252 (261)
270 PRK14264 phosphate ABC transpo 100.0 2.3E-38 5.1E-43 369.9 24.8 220 1216-1442 43-291 (305)
271 PRK13548 hmuV hemin importer A 100.0 3E-38 6.5E-43 361.1 25.1 213 1218-1441 2-231 (258)
272 COG1125 OpuBA ABC-type proline 100.0 3.2E-39 7E-44 342.2 15.6 203 602-820 2-227 (309)
273 PRK10253 iron-enterobactin tra 100.0 2.5E-38 5.4E-43 363.5 24.3 218 1217-1441 6-234 (265)
274 PRK11247 ssuB aliphatic sulfon 100.0 3.2E-38 7E-43 359.1 24.7 204 1217-1436 11-219 (257)
275 PRK14265 phosphate ABC transpo 100.0 3.1E-38 6.7E-43 363.8 24.8 221 1216-1443 18-261 (274)
276 cd03300 ABC_PotA_N PotA is an 100.0 2.6E-38 5.6E-43 356.4 23.5 216 1219-1443 1-223 (232)
277 cd03269 ABC_putative_ATPase Th 100.0 1.1E-38 2.3E-43 354.2 20.1 204 1219-1433 1-210 (210)
278 PRK14258 phosphate ABC transpo 100.0 3.5E-38 7.5E-43 361.4 24.9 221 1217-1444 6-249 (261)
279 PRK10584 putative ABC transpor 100.0 3E-38 6.5E-43 355.3 23.6 211 1217-1432 5-227 (228)
280 PRK15112 antimicrobial peptide 100.0 6.5E-38 1.4E-42 360.2 26.8 225 1218-1451 4-251 (267)
281 PRK15093 antimicrobial peptide 100.0 3E-38 6.5E-43 372.4 24.6 226 1218-1448 3-256 (330)
282 TIGR02673 FtsE cell division A 100.0 1.5E-38 3.3E-43 354.1 20.9 200 1219-1428 2-214 (214)
283 PRK10908 cell division protein 100.0 4.8E-38 1E-42 352.0 24.9 207 1219-1431 2-217 (222)
284 cd03290 ABCC_SUR1_N The SUR do 100.0 3.6E-38 7.8E-43 352.0 23.6 208 1220-1428 2-218 (218)
285 PRK14255 phosphate ABC transpo 100.0 3.8E-38 8.1E-43 359.9 24.1 222 1218-1446 5-242 (252)
286 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.4E-38 7.4E-43 350.4 23.1 200 1219-1433 1-211 (211)
287 TIGR03873 F420-0_ABC_ATP propo 100.0 4E-38 8.7E-43 360.2 24.2 215 1219-1440 2-226 (256)
288 PRK14246 phosphate ABC transpo 100.0 7.4E-38 1.6E-42 357.2 26.3 227 1217-1450 9-251 (257)
289 PRK10247 putative ABC transpor 100.0 2.8E-38 6E-43 354.3 22.0 211 1218-1436 7-223 (225)
290 COG1118 CysA ABC-type sulfate/ 100.0 1.3E-38 2.7E-43 347.3 18.5 220 1218-1446 2-233 (345)
291 COG1131 CcmA ABC-type multidru 100.0 2.3E-38 5E-43 365.8 21.9 213 1218-1441 4-227 (293)
292 COG1120 FepC ABC-type cobalami 100.0 1.8E-38 3.9E-43 350.1 19.4 201 601-818 2-228 (258)
293 cd03262 ABC_HisP_GlnQ_permease 100.0 2.6E-38 5.6E-43 352.1 20.8 204 1219-1429 1-213 (213)
294 cd03235 ABC_Metallic_Cations A 100.0 2.1E-38 4.6E-43 352.6 20.1 201 1220-1433 1-213 (213)
295 cd03299 ABC_ModC_like Archeal 100.0 1.3E-37 2.8E-42 351.3 26.4 214 1219-1442 1-221 (235)
296 PRK13547 hmuV hemin importer A 100.0 6.3E-38 1.4E-42 359.7 24.2 220 1219-1440 2-244 (272)
297 TIGR01188 drrA daunorubicin re 100.0 3.8E-38 8.2E-43 368.2 22.5 207 1227-1441 2-214 (302)
298 PRK10771 thiQ thiamine transpo 100.0 1E-37 2.3E-42 351.6 25.2 209 1219-1442 2-221 (232)
299 cd03250 ABCC_MRP_domain1 Domai 100.0 4.9E-38 1.1E-42 347.2 22.0 204 602-806 1-204 (204)
300 PRK10418 nikD nickel transport 100.0 1E-37 2.2E-42 356.3 24.6 221 1218-1452 4-243 (254)
301 COG0410 LivF ABC-type branched 100.0 1E-37 2.3E-42 330.6 21.9 220 1218-1443 3-229 (237)
302 TIGR01978 sufC FeS assembly AT 100.0 8.2E-38 1.8E-42 355.4 22.7 215 1219-1440 1-234 (243)
303 PRK10419 nikE nickel transport 100.0 1.3E-37 2.8E-42 357.7 24.5 231 1218-1451 3-251 (268)
304 COG4555 NatA ABC-type Na+ tran 100.0 1.8E-38 3.9E-43 325.5 14.9 217 1219-1442 2-224 (245)
305 COG1127 Ttg2A ABC-type transpo 100.0 8.5E-38 1.8E-42 331.0 20.3 203 599-819 6-236 (263)
306 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.1E-37 2.3E-42 341.9 21.5 200 600-818 3-227 (254)
307 TIGR02323 CP_lyasePhnK phospho 100.0 2.1E-37 4.5E-42 354.0 24.7 226 1218-1450 3-248 (253)
308 cd03234 ABCG_White The White s 100.0 7.9E-38 1.7E-42 351.1 20.8 212 1219-1433 4-226 (226)
309 PRK11144 modC molybdate transp 100.0 1.8E-37 3.9E-42 368.7 25.0 212 1219-1444 2-222 (352)
310 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.6E-37 5.6E-42 355.1 25.4 213 597-818 35-247 (282)
311 PRK11248 tauB taurine transpor 100.0 1.3E-37 2.9E-42 354.7 22.8 205 1219-1435 2-215 (255)
312 COG1117 PstB ABC-type phosphat 100.0 2.1E-38 4.5E-43 328.4 14.6 205 599-818 5-237 (253)
313 COG3840 ThiQ ABC-type thiamine 100.0 4.3E-38 9.3E-43 317.2 16.4 198 602-819 2-220 (231)
314 COG3839 MalK ABC-type sugar tr 100.0 6.8E-38 1.5E-42 358.4 20.1 203 601-820 3-225 (338)
315 PRK09984 phosphonate/organopho 100.0 2.4E-37 5.1E-42 355.1 24.4 229 1218-1451 4-250 (262)
316 TIGR01277 thiQ thiamine ABC tr 100.0 1.9E-37 4.1E-42 344.8 22.9 201 1219-1434 1-212 (213)
317 COG1136 SalX ABC-type antimicr 100.0 1.2E-37 2.7E-42 336.9 20.6 195 602-808 2-221 (226)
318 TIGR02142 modC_ABC molybdenum 100.0 2E-37 4.3E-42 369.0 24.5 215 1223-1446 4-227 (354)
319 TIGR02982 heterocyst_DevA ABC 100.0 1.2E-37 2.7E-42 348.1 20.9 206 1219-1429 2-219 (220)
320 cd03252 ABCC_Hemolysin The ABC 100.0 4.1E-37 8.9E-42 348.1 23.3 212 602-819 1-226 (237)
321 cd03228 ABCC_MRP_Like The MRP 100.0 3.5E-37 7.6E-42 330.3 21.2 171 1219-1428 1-171 (171)
322 COG1137 YhbG ABC-type (unclass 100.0 3.8E-38 8.3E-43 322.7 12.3 225 1217-1443 3-231 (243)
323 COG3842 PotA ABC-type spermidi 100.0 1.4E-37 3E-42 357.7 18.0 204 600-820 4-228 (352)
324 TIGR03740 galliderm_ABC gallid 100.0 5.8E-37 1.3E-41 343.5 22.6 204 1219-1437 1-210 (223)
325 COG1118 CysA ABC-type sulfate/ 100.0 1.5E-37 3.3E-42 338.9 17.2 201 602-820 3-229 (345)
326 cd03254 ABCC_Glucan_exporter_l 100.0 8.8E-37 1.9E-41 343.6 23.4 211 601-818 2-226 (229)
327 cd03230 ABC_DR_subfamily_A Thi 100.0 6.4E-37 1.4E-41 328.9 21.1 170 1219-1429 1-173 (173)
328 COG0444 DppD ABC-type dipeptid 100.0 1.6E-36 3.4E-41 338.4 24.6 224 1219-1450 2-253 (316)
329 cd03288 ABCC_SUR2 The SUR doma 100.0 1.4E-36 3.1E-41 347.3 24.9 214 599-818 17-243 (257)
330 cd03229 ABC_Class3 This class 100.0 8.1E-37 1.7E-41 329.7 21.5 172 1219-1428 1-178 (178)
331 cd03217 ABC_FeS_Assembly ABC-t 100.0 9.7E-37 2.1E-41 335.3 22.5 185 1219-1439 1-192 (200)
332 cd03297 ABC_ModC_molybdenum_tr 100.0 7.3E-37 1.6E-41 340.5 21.8 203 1220-1433 3-214 (214)
333 cd03244 ABCC_MRP_domain2 Domai 100.0 1.5E-36 3.3E-41 339.8 23.3 206 601-812 2-220 (221)
334 cd03233 ABC_PDR_domain1 The pl 100.0 1E-36 2.2E-41 335.5 21.3 190 1218-1433 3-202 (202)
335 PRK09544 znuC high-affinity zi 100.0 2E-36 4.3E-41 343.8 24.2 209 1218-1451 4-218 (251)
336 cd03251 ABCC_MsbA MsbA is an e 100.0 1.7E-36 3.7E-41 342.4 23.5 212 602-819 1-226 (234)
337 PRK15056 manganese/iron transp 100.0 2.5E-36 5.4E-41 348.1 24.0 209 1218-1440 6-230 (272)
338 cd03215 ABC_Carb_Monos_II This 100.0 1.2E-36 2.5E-41 329.7 19.7 172 1218-1429 4-182 (182)
339 cd03213 ABCG_EPDR ABCG transpo 100.0 1.3E-36 2.8E-41 332.5 20.2 182 1218-1433 3-194 (194)
340 COG1122 CbiO ABC-type cobalt t 100.0 1.1E-36 2.4E-41 336.9 19.2 203 601-819 3-229 (235)
341 cd03253 ABCC_ATM1_transporter 100.0 3E-36 6.6E-41 340.9 23.2 209 603-818 2-224 (236)
342 cd03214 ABC_Iron-Siderophores_ 100.0 1.6E-36 3.4E-41 328.1 19.8 177 1220-1433 1-180 (180)
343 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.1E-36 6.8E-41 341.2 23.0 211 603-818 2-226 (238)
344 COG3638 ABC-type phosphate/pho 100.0 7.4E-37 1.6E-41 323.1 16.5 202 600-817 2-236 (258)
345 cd03232 ABC_PDR_domain2 The pl 100.0 1.4E-36 3.1E-41 331.7 19.5 181 1218-1433 3-192 (192)
346 COG1124 DppF ABC-type dipeptid 100.0 1.7E-36 3.7E-41 323.4 19.3 207 601-819 3-232 (252)
347 CHL00131 ycf16 sulfate ABC tra 100.0 4E-36 8.7E-41 343.3 23.8 217 1218-1438 7-239 (252)
348 PRK03695 vitamin B12-transport 100.0 3.1E-36 6.6E-41 342.5 22.7 210 1220-1441 2-223 (248)
349 cd03223 ABCD_peroxisomal_ALDP 100.0 2.7E-36 5.9E-41 321.3 20.6 164 1219-1428 1-164 (166)
350 PRK00349 uvrA excinuclease ABC 100.0 1.4E-35 3E-40 382.7 31.2 226 1218-1450 614-937 (943)
351 TIGR02770 nickel_nikD nickel i 100.0 2.9E-36 6.2E-41 339.3 21.8 206 1235-1448 1-223 (230)
352 COG4178 ABC-type uncharacteriz 100.0 3.8E-33 8.3E-38 337.0 50.1 452 333-804 104-588 (604)
353 TIGR03608 L_ocin_972_ABC putat 100.0 1.4E-36 3E-41 336.4 18.6 197 1221-1424 1-206 (206)
354 COG4619 ABC-type uncharacteriz 100.0 8.4E-37 1.8E-41 303.5 14.6 197 1227-1431 10-214 (223)
355 PRK09580 sufC cysteine desulfu 100.0 5.4E-36 1.2E-40 341.5 22.9 215 1219-1438 2-233 (248)
356 COG1123 ATPase components of v 100.0 6.4E-36 1.4E-40 356.8 24.1 228 1218-1450 5-254 (539)
357 cd03245 ABCC_bacteriocin_expor 100.0 7.5E-36 1.6E-40 334.0 23.2 205 601-811 2-220 (220)
358 TIGR01186 proV glycine betaine 100.0 1.4E-36 3.1E-41 358.5 18.2 188 621-819 7-220 (363)
359 PRK11650 ugpC glycerol-3-phosp 100.0 4.1E-36 8.9E-41 356.1 21.6 202 601-819 3-225 (356)
360 TIGR01184 ntrCD nitrate transp 100.0 2.9E-36 6.3E-41 338.9 18.9 194 1236-1439 1-203 (230)
361 cd03267 ABC_NatA_like Similar 100.0 5E-36 1.1E-40 338.4 20.1 195 1233-1433 34-236 (236)
362 TIGR02314 ABC_MetN D-methionin 100.0 3.9E-36 8.6E-41 353.1 19.9 203 602-818 2-230 (343)
363 PRK13631 cbiO cobalt transport 100.0 6.8E-36 1.5E-40 349.9 21.8 209 598-818 18-265 (320)
364 COG0411 LivG ABC-type branched 100.0 3.3E-36 7.1E-41 321.6 16.9 222 1218-1443 4-242 (250)
365 PRK13549 xylose transporter AT 100.0 1.3E-35 2.8E-40 372.0 24.2 216 1218-1440 5-232 (506)
366 PRK15439 autoinducer 2 ABC tra 100.0 2.5E-35 5.4E-40 369.1 26.7 215 1218-1440 11-229 (510)
367 cd03290 ABCC_SUR1_N The SUR do 100.0 1.3E-35 2.8E-40 331.5 21.4 199 603-806 2-218 (218)
368 COG4175 ProV ABC-type proline/ 100.0 1.3E-35 2.7E-40 323.4 20.6 220 1218-1446 4-260 (386)
369 PRK11432 fbpC ferric transport 100.0 1.3E-35 2.7E-40 350.9 21.7 201 601-819 6-227 (351)
370 cd03216 ABC_Carb_Monos_I This 100.0 2.6E-35 5.6E-40 312.9 21.9 159 1219-1431 1-162 (163)
371 PRK09700 D-allose transporter 100.0 2.1E-35 4.5E-40 370.7 24.5 216 1218-1440 5-234 (510)
372 PRK13538 cytochrome c biogenes 100.0 1.8E-35 3.8E-40 326.6 20.5 194 1219-1424 2-202 (204)
373 PRK10762 D-ribose transporter 100.0 2.4E-35 5.1E-40 369.1 24.3 216 1218-1440 4-230 (501)
374 cd03261 ABC_Org_Solvent_Resist 100.0 1.4E-35 3E-40 335.1 19.6 198 603-818 2-226 (235)
375 cd03231 ABC_CcmA_heme_exporter 100.0 4.2E-35 9.1E-40 322.7 21.9 194 1219-1424 1-198 (201)
376 PRK09452 potA putrescine/sperm 100.0 2.7E-35 5.9E-40 350.1 21.8 202 600-819 13-235 (375)
377 PRK13643 cbiO cobalt transport 100.0 2.7E-35 6E-40 341.6 20.5 205 602-818 2-233 (288)
378 TIGR03265 PhnT2 putative 2-ami 100.0 2.5E-35 5.4E-40 349.0 20.3 201 601-819 4-225 (353)
379 COG2884 FtsE Predicted ATPase 100.0 2E-35 4.3E-40 301.0 16.5 193 602-811 2-219 (223)
380 PRK13637 cbiO cobalt transport 100.0 3.6E-35 7.7E-40 340.5 20.8 207 601-818 2-234 (287)
381 PRK13634 cbiO cobalt transport 100.0 3.3E-35 7.2E-40 341.2 20.5 205 602-818 3-235 (290)
382 PRK10261 glutathione transport 100.0 7.5E-35 1.6E-39 371.7 25.8 221 1218-1443 12-261 (623)
383 PRK11288 araG L-arabinose tran 100.0 5.8E-35 1.3E-39 365.6 24.2 211 1218-1435 4-224 (501)
384 COG4615 PvdE ABC-type sideroph 100.0 2.1E-32 4.5E-37 304.3 41.5 507 265-810 3-529 (546)
385 PRK13650 cbiO cobalt transport 100.0 4.8E-35 1E-39 338.2 21.3 203 601-818 4-229 (279)
386 PRK10982 galactose/methyl gala 100.0 5.2E-35 1.1E-39 365.4 23.3 212 1221-1439 1-222 (491)
387 cd03369 ABCC_NFT1 Domain 2 of 100.0 9.2E-35 2E-39 321.9 22.4 189 600-812 5-206 (207)
388 PRK10851 sulfate/thiosulfate t 100.0 5.2E-35 1.1E-39 346.3 21.7 201 601-819 2-227 (353)
389 PRK13540 cytochrome c biogenes 100.0 5.1E-35 1.1E-39 321.9 20.2 193 1219-1423 2-198 (200)
390 cd03296 ABC_CysA_sulfate_impor 100.0 6.3E-35 1.4E-39 330.5 21.3 198 602-817 3-225 (239)
391 cd03260 ABC_PstB_phosphate_tra 100.0 3.1E-35 6.7E-40 330.6 18.5 197 602-815 1-226 (227)
392 COG1245 Predicted ATPase, RNas 100.0 2.4E-34 5.2E-39 325.5 25.1 176 1242-1439 363-546 (591)
393 cd03248 ABCC_TAP TAP, the Tran 100.0 8.3E-35 1.8E-39 326.9 21.5 205 598-807 8-226 (226)
394 TIGR03258 PhnT 2-aminoethylpho 100.0 4.3E-35 9.4E-40 347.3 20.0 202 600-819 4-229 (362)
395 PRK14269 phosphate ABC transpo 100.0 6.4E-35 1.4E-39 331.8 20.6 203 601-818 2-230 (246)
396 PRK13543 cytochrome c biogenes 100.0 8.6E-35 1.9E-39 323.5 21.2 195 1218-1426 11-212 (214)
397 TIGR00630 uvra excinuclease AB 100.0 1.2E-33 2.7E-38 364.0 34.9 214 1218-1438 612-923 (924)
398 PRK11000 maltose/maltodextrin 100.0 5.3E-35 1.2E-39 349.0 20.8 200 601-818 3-223 (369)
399 COG4608 AppF ABC-type oligopep 100.0 5.4E-35 1.2E-39 319.7 19.0 196 1218-1450 4-209 (268)
400 PRK10938 putative molybdenum t 100.0 8.2E-35 1.8E-39 363.8 23.3 212 1218-1441 3-225 (490)
401 PRK00635 excinuclease ABC subu 100.0 4.1E-34 8.9E-39 381.4 31.2 211 1218-1441 600-907 (1809)
402 TIGR01257 rim_protein retinal- 100.0 8.5E-35 1.8E-39 393.9 25.0 220 1217-1442 927-1151(2272)
403 PRK13651 cobalt transporter AT 100.0 7E-35 1.5E-39 339.4 20.9 206 601-818 2-254 (305)
404 PRK15134 microcin C ABC transp 100.0 2.7E-34 5.9E-39 361.9 27.8 221 1218-1443 5-249 (529)
405 cd03259 ABC_Carb_Solutes_like 100.0 4.6E-35 9.9E-40 325.9 18.3 191 603-811 2-213 (213)
406 PRK13647 cbiO cobalt transport 100.0 5.8E-35 1.3E-39 336.6 19.8 199 601-816 4-225 (274)
407 PRK13646 cbiO cobalt transport 100.0 6.8E-35 1.5E-39 338.2 20.5 206 601-818 2-235 (286)
408 COG4559 ABC-type hemin transpo 100.0 8.4E-35 1.8E-39 300.8 18.8 213 1219-1442 2-232 (259)
409 cd03219 ABC_Mj1267_LivG_branch 100.0 5.5E-35 1.2E-39 330.6 18.6 197 603-817 2-231 (236)
410 PRK14250 phosphate ABC transpo 100.0 1.4E-34 3E-39 327.8 21.8 201 601-818 3-221 (241)
411 PRK14242 phosphate transporter 100.0 9.8E-35 2.1E-39 332.0 20.5 203 600-817 5-236 (253)
412 TIGR02633 xylG D-xylose ABC tr 100.0 1.5E-34 3.2E-39 362.3 24.0 214 1219-1439 2-229 (500)
413 PRK10535 macrolide transporter 100.0 1.4E-34 3E-39 370.4 23.8 217 1218-1439 4-231 (648)
414 cd03265 ABC_DrrA DrrA is the A 100.0 6.7E-35 1.4E-39 326.2 18.1 197 602-816 1-219 (220)
415 PRK13546 teichoic acids export 100.0 3.5E-34 7.6E-39 327.0 24.4 214 1218-1449 4-241 (264)
416 PRK11607 potG putrescine trans 100.0 1.3E-34 2.8E-39 345.0 21.5 204 599-819 17-240 (377)
417 TIGR00960 3a0501s02 Type II (G 100.0 5.3E-35 1.2E-39 326.1 17.1 190 602-807 2-216 (216)
418 cd03226 ABC_cobalt_CbiO_domain 100.0 7.9E-35 1.7E-39 321.9 18.2 188 604-808 2-205 (205)
419 cd03293 ABC_NrtD_SsuB_transpor 100.0 9.2E-35 2E-39 325.0 18.8 197 603-813 2-218 (220)
420 COG4598 HisP ABC-type histidin 100.0 4.6E-35 9.9E-40 293.6 14.5 221 1217-1445 5-246 (256)
421 PRK14273 phosphate ABC transpo 100.0 1.8E-34 3.8E-39 329.9 21.3 204 600-818 6-238 (254)
422 PRK13635 cbiO cobalt transport 100.0 2E-34 4.4E-39 332.7 22.0 202 601-818 5-229 (279)
423 TIGR00972 3a0107s01c2 phosphat 100.0 1.2E-34 2.7E-39 329.8 19.9 202 602-818 2-232 (247)
424 TIGR02315 ABC_phnC phosphonate 100.0 1.3E-34 2.9E-39 329.0 20.2 198 602-816 2-233 (243)
425 PRK13539 cytochrome c biogenes 100.0 2.8E-34 6.1E-39 317.7 21.7 194 1218-1426 2-200 (207)
426 PRK11153 metN DL-methionine tr 100.0 1.5E-34 3.2E-39 342.6 20.8 204 602-819 2-231 (343)
427 PRK13644 cbiO cobalt transport 100.0 1.8E-34 4E-39 332.5 20.7 200 602-818 2-224 (274)
428 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.1E-34 2.3E-39 333.7 18.8 186 621-818 38-250 (269)
429 PRK13537 nodulation ABC transp 100.0 1.8E-34 3.9E-39 336.9 20.6 202 600-819 6-228 (306)
430 PLN03211 ABC transporter G-25; 100.0 4.1E-34 8.9E-39 363.8 25.6 199 1233-1440 81-296 (659)
431 cd03268 ABC_BcrA_bacitracin_re 100.0 1.9E-34 4E-39 319.8 19.6 192 602-811 1-208 (208)
432 TIGR02324 CP_lyasePhnL phospho 100.0 2.2E-34 4.8E-39 322.9 20.3 201 1219-1424 2-222 (224)
433 cd03263 ABC_subfamily_A The AB 100.0 1.6E-34 3.6E-39 323.2 19.2 198 602-816 1-219 (220)
434 cd03256 ABC_PhnC_transporter A 100.0 1.8E-34 3.8E-39 327.6 19.7 197 603-816 2-232 (241)
435 PRK10744 pstB phosphate transp 100.0 2.9E-34 6.3E-39 329.0 21.6 205 599-818 11-244 (260)
436 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.3E-34 2.8E-39 323.5 18.0 191 603-807 2-218 (218)
437 TIGR01189 ccmA heme ABC export 100.0 1.8E-34 3.9E-39 317.2 18.8 192 1219-1423 1-197 (198)
438 KOG0060 Long-chain acyl-CoA tr 100.0 5.8E-32 1.2E-36 315.4 40.4 335 1079-1427 270-642 (659)
439 PRK11629 lolD lipoprotein tran 100.0 2.4E-34 5.1E-39 324.5 20.1 198 601-812 5-228 (233)
440 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.8E-34 6E-39 324.6 20.6 199 602-818 2-221 (236)
441 PRK13545 tagH teichoic acids e 100.0 1E-33 2.2E-38 339.4 26.2 214 1218-1450 21-241 (549)
442 PRK11247 ssuB aliphatic sulfon 100.0 4.1E-34 8.8E-39 325.5 21.3 197 600-814 11-219 (257)
443 cd03224 ABC_TM1139_LivF_branch 100.0 2.5E-34 5.5E-39 322.2 19.3 199 602-817 1-220 (222)
444 cd03235 ABC_Metallic_Cations A 100.0 2E-34 4.4E-39 320.7 18.3 188 604-810 2-212 (213)
445 PRK14235 phosphate transporter 100.0 4E-34 8.7E-39 328.8 21.2 204 599-817 17-250 (267)
446 cd03258 ABC_MetN_methionine_tr 100.0 3.4E-34 7.4E-39 323.4 20.2 202 602-817 2-229 (233)
447 cd03301 ABC_MalK_N The N-termi 100.0 2.1E-34 4.6E-39 320.6 18.1 192 602-811 1-213 (213)
448 PRK14237 phosphate transporter 100.0 4.4E-34 9.5E-39 328.5 21.3 207 597-818 16-251 (267)
449 KOG0066 eIF2-interacting prote 100.0 5.1E-34 1.1E-38 318.0 20.9 197 1218-1437 586-788 (807)
450 TIGR01288 nodI ATP-binding ABC 100.0 3.9E-34 8.4E-39 334.6 20.8 202 600-819 3-225 (303)
451 cd03264 ABC_drug_resistance_li 100.0 2.3E-34 5E-39 319.8 17.9 190 602-811 1-211 (211)
452 PRK13633 cobalt transporter AT 100.0 5.4E-34 1.2E-38 329.9 21.6 206 601-818 4-233 (280)
453 cd03247 ABCC_cytochrome_bd The 100.0 3.9E-34 8.3E-39 308.9 19.1 166 602-811 1-178 (178)
454 PRK09536 btuD corrinoid ABC tr 100.0 3.6E-34 7.8E-39 342.1 20.7 200 601-818 3-228 (402)
455 cd03218 ABC_YhbG The ABC trans 100.0 3.2E-34 7E-39 323.5 19.2 197 603-817 2-221 (232)
456 PRK13640 cbiO cobalt transport 100.0 4.7E-34 1E-38 330.4 21.0 203 600-818 4-232 (282)
457 PRK13641 cbiO cobalt transport 100.0 4.1E-34 9E-39 331.8 20.5 206 601-818 2-234 (287)
458 TIGR03269 met_CoM_red_A2 methy 100.0 2.9E-34 6.4E-39 361.1 20.8 215 1219-1440 1-258 (520)
459 PRK14245 phosphate ABC transpo 100.0 3.7E-34 8E-39 326.5 19.7 203 601-818 3-234 (250)
460 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 4.9E-34 1.1E-38 319.4 20.3 197 1219-1433 23-224 (224)
461 TIGR03771 anch_rpt_ABC anchore 100.0 3.5E-34 7.5E-39 320.6 19.0 193 1241-1450 1-209 (223)
462 PRK13636 cbiO cobalt transport 100.0 5.2E-34 1.1E-38 330.3 21.1 201 601-818 5-231 (283)
463 cd03266 ABC_NatA_sodium_export 100.0 3.4E-34 7.3E-39 320.2 18.8 196 602-811 2-218 (218)
464 PRK14274 phosphate ABC transpo 100.0 6E-34 1.3E-38 326.4 21.3 204 600-818 11-243 (259)
465 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.9E-34 8.5E-39 324.7 19.6 200 603-817 2-224 (242)
466 PRK13632 cbiO cobalt transport 100.0 7.1E-34 1.5E-38 327.5 22.0 203 600-818 6-231 (271)
467 PRK14259 phosphate ABC transpo 100.0 7.5E-34 1.6E-38 326.7 21.7 205 599-818 11-253 (269)
468 COG4181 Predicted ABC-type tra 100.0 4.3E-34 9.3E-39 285.1 16.9 209 1218-1432 6-227 (228)
469 TIGR01166 cbiO cobalt transpor 100.0 3.1E-34 6.7E-39 313.3 17.5 177 1233-1414 5-189 (190)
470 PRK11831 putative ABC transpor 100.0 7.7E-34 1.7E-38 326.8 21.6 201 600-818 6-233 (269)
471 PRK14248 phosphate ABC transpo 100.0 6.5E-34 1.4E-38 327.6 21.0 205 599-818 19-252 (268)
472 cd03298 ABC_ThiQ_thiamine_tran 100.0 5.3E-34 1.1E-38 316.9 19.6 190 602-811 1-211 (211)
473 PRK13536 nodulation factor exp 100.0 4.9E-34 1.1E-38 336.3 20.1 203 599-819 39-262 (340)
474 PRK14249 phosphate ABC transpo 100.0 7.7E-34 1.7E-38 324.0 21.0 203 601-818 4-235 (251)
475 PRK14251 phosphate ABC transpo 100.0 4.9E-34 1.1E-38 325.8 19.4 202 601-817 4-234 (251)
476 PRK14268 phosphate ABC transpo 100.0 6.4E-34 1.4E-38 325.8 20.2 203 600-817 11-241 (258)
477 TIGR02211 LolD_lipo_ex lipopro 100.0 5.3E-34 1.2E-38 319.3 19.1 193 602-808 2-220 (221)
478 PRK13541 cytochrome c biogenes 100.0 5.7E-34 1.2E-38 312.3 18.9 188 1219-1422 2-193 (195)
479 PRK14270 phosphate ABC transpo 100.0 7.1E-34 1.5E-38 324.4 20.3 203 601-818 4-235 (251)
480 PRK10247 putative ABC transpor 100.0 6.6E-34 1.4E-38 318.9 19.7 198 600-814 6-223 (225)
481 PRK14239 phosphate transporter 100.0 7.3E-34 1.6E-38 324.7 20.4 203 601-818 5-236 (252)
482 PRK09493 glnQ glutamine ABC tr 100.0 7.1E-34 1.5E-38 322.3 20.1 199 602-818 2-225 (240)
483 PRK13645 cbiO cobalt transport 100.0 6.7E-34 1.4E-38 330.8 20.4 207 600-818 5-240 (289)
484 COG1129 MglA ABC-type sugar tr 100.0 1.4E-33 3.1E-38 334.8 23.4 210 1218-1434 8-228 (500)
485 cd03269 ABC_putative_ATPase Th 100.0 4.6E-34 1E-38 317.1 18.1 191 603-811 2-210 (210)
486 PRK13649 cbiO cobalt transport 100.0 6.2E-34 1.3E-38 329.9 19.9 206 601-818 2-234 (280)
487 PRK10575 iron-hydroxamate tran 100.0 1.1E-33 2.4E-38 325.0 21.3 201 599-817 9-236 (265)
488 PRK14240 phosphate transporter 100.0 1.1E-33 2.4E-38 322.7 21.2 202 601-817 3-233 (250)
489 PRK14243 phosphate transporter 100.0 1.4E-33 3.1E-38 323.7 22.2 204 600-818 9-248 (264)
490 TIGR03411 urea_trans_UrtD urea 100.0 8.6E-34 1.9E-38 322.1 20.1 197 602-817 3-230 (242)
491 TIGR03415 ABC_choXWV_ATP choli 100.0 4.5E-34 9.8E-39 338.6 18.5 188 621-819 38-255 (382)
492 COG0410 LivF ABC-type branched 100.0 7.6E-34 1.6E-38 301.3 18.0 205 602-819 4-227 (237)
493 PRK13652 cbiO cobalt transport 100.0 1.2E-33 2.7E-38 326.3 21.4 201 601-818 3-227 (277)
494 cd03223 ABCD_peroxisomal_ALDP 100.0 8.8E-34 1.9E-38 302.0 18.5 161 602-805 1-163 (166)
495 PRK10619 histidine/lysine/argi 100.0 9.4E-34 2E-38 324.4 20.0 202 600-818 4-241 (257)
496 PRK13642 cbiO cobalt transport 100.0 1.2E-33 2.5E-38 326.6 20.9 203 601-818 4-229 (277)
497 PRK14236 phosphate transporter 100.0 1.1E-33 2.5E-38 326.0 20.7 205 598-817 22-255 (272)
498 PRK10584 putative ABC transpor 100.0 1.3E-33 2.8E-38 317.7 20.6 197 600-810 5-227 (228)
499 TIGR03410 urea_trans_UrtE urea 100.0 8.6E-34 1.9E-38 319.5 19.3 197 603-816 2-219 (230)
500 PRK13648 cbiO cobalt transport 100.0 1.3E-33 2.8E-38 325.1 21.1 203 600-818 6-231 (269)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.5e-258 Score=2450.15 Aligned_cols=1236 Identities=42% Similarity=0.705 Sum_probs=1136.4
Q ss_pred CCCCCCCh--hHHHHHHhhHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCcchHHHHHHHHhHh
Q 000511 199 DCNTDSSY--WDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYP 276 (1455)
Q Consensus 199 ~~e~~~~~--~s~~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~ 276 (1455)
.|.+.++. +|+++|||++|++++|||++|+.+|+|+++++++++.+.++|++.|+++.++++++|+++++++++|+|+
T Consensus 123 ~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~~~psl~~al~~~f~~~ 202 (1381)
T KOG0054|consen 123 NPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSGKKPSLLRALLRTFGRT 202 (1381)
T ss_pred CcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhccccCCcHHHHHHHHHHHHH
Confidence 34455555 9999999999999999999999999999999999999999999999998744345789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 277 YICLGLLKVVNDSIGFAGPLLLNKLIKFLQQG-SGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 355 (1455)
Q Consensus 277 ~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~-~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy 355 (1455)
++..++++.+.+...|++|.+++.++++++++ .+.+.||+++++++++.++++++.++|+|...++|+++|+++.++||
T Consensus 203 ~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY 282 (1381)
T KOG0054|consen 203 FLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIY 282 (1381)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999884 56788999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000511 356 QKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIA 435 (1455)
Q Consensus 356 ~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~ 435 (1455)
+|+|+++...+++.+.|+++|+|++|++|+.++..++|.+|.+|+|+++++|+||.++|+++++|++++++++|+|.+++
T Consensus 283 ~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~a 362 (1381)
T KOG0054|consen 283 RKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFLA 362 (1381)
T ss_pred HhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 436 NLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFT 515 (1455)
Q Consensus 436 ~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1455)
++++++|++.|+.+|+|+++|+|+|+|||+||||+||+.|.++|++.|++|++.++|..++.+++.+++.+.|+++++++
T Consensus 363 ~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~t 442 (1381)
T KOG0054|consen 363 KKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVVT 442 (1381)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCcc
Q 000511 516 FGLFA-LMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSN 594 (1455)
Q Consensus 516 f~~~~-~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~ 594 (1455)
|++|+ ..++.++++++|+++++|++++.|+.++|+.++.++++.+|++|+++||..+|.++..... .+.
T Consensus 443 F~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~--~~~-------- 512 (1381)
T KOG0054|consen 443 FVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVER--SPD-------- 512 (1381)
T ss_pred HHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcccccc--CCC--------
Confidence 99999 7788999999999999999999999999999999999999999999999998876632210 011
Q ss_pred CCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcCcEEEEc
Q 000511 595 FNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVP 674 (1455)
Q Consensus 595 ~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~ 674 (1455)
...+.+++++|++|+|++++++| .|+||||+|++|+++||||++||||||||++|+||+++.+|+|.++|.+||||
T Consensus 513 -~~~~~~i~i~~~sfsW~~~~~~~---tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv~ 588 (1381)
T KOG0054|consen 513 -EAGENAIEIKNGSFSWDSESPEP---TLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVP 588 (1381)
T ss_pred -CCCCceEEEeeeeEecCCCCCcc---cccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEec
Confidence 23456799999999999854444 49999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEc
Q 000511 675 QVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLD 754 (1455)
Q Consensus 675 Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlD 754 (1455)
|+|||+||||||||+||++||++||++|+++|+|++|++.||+||+|+|||+|.||||||||||+||||+|+++||||||
T Consensus 589 Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLD 668 (1381)
T KOG0054|consen 589 QQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLD 668 (1381)
T ss_pred cccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhh
Q 000511 755 DVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSL 834 (1455)
Q Consensus 755 ep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~ 834 (1455)
||+||||+|+++|||++|+.| .+++||+|+|||+++++++||+|++|+||+|.++|+|+|+++.+..+.++..+.+.+.
T Consensus 669 DplSAVDahvg~~if~~ci~~-~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~~ 747 (1381)
T KOG0054|consen 669 DPLSAVDAHVGKHIFEECIRG-LLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESEQ 747 (1381)
T ss_pred CcchhhhHhhhHHHHHHHHHh-hhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchhh
Confidence 999999999999999999977 8899999999999999999999999999999999999999976655544321111110
Q ss_pred hh--hhhhhcccccc------hhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHHHhhh-hhHHHHHHHHHHHH
Q 000511 835 HM--QKQEMRTNASS------ANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKF-SGWFITLVICLSAI 905 (1455)
Q Consensus 835 ~~--~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~-~g~~~~~~~~~~~~ 905 (1455)
.. .....+..... ........+++.....++..+..++|+++.|.+++++|+.|+++ .|+....+++++.+
T Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v 827 (1381)
T KOG0054|consen 748 EEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFV 827 (1381)
T ss_pred ccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 00 00000000000 00000000111111112234566778889999999999999998 56666676778888
Q ss_pred HHHHHHhhhhhhhhhhhcccCCCCCC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Q 000511 906 LMQASRNGNDLWLSYWVDTTGSSQTK-YSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVL 984 (1455)
Q Consensus 906 ~~~~~~~~~~~wl~~w~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ 984 (1455)
..+++..+.++|+++|++........ .+..+|+++|.+++++..++.+++++.+...+.++++++|++|+++++|+||+
T Consensus 828 ~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~ 907 (1381)
T KOG0054|consen 828 LTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMS 907 (1381)
T ss_pred HHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch
Confidence 99999999999999999875432221 46779999999999999999999999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 985 FFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRR 1064 (1455)
Q Consensus 985 ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l~~ 1064 (1455)
|||+||+|||+||||+|++.+|..+|..+..++.+++.+++++++++++.|+++++++|+.++|++++++|++++||++|
T Consensus 908 FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkR 987 (1381)
T KOG0054|consen 908 FFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKR 987 (1381)
T ss_pred hcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000511 1065 LDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGS 1144 (1455)
Q Consensus 1065 l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~ 1144 (1455)
+|+.+|||+|+||+|+++|+.|||||+.|++|.+++.+++|.+++++|.....+||+++|+|+++++++.++++++++..
T Consensus 988 LesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~ 1067 (1381)
T KOG0054|consen 988 LESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLP 1067 (1381)
T ss_pred hhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888888643
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccc--cccCCCCCCCCCCCccEEEE
Q 000511 1145 RGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE--LCGYQSLSPDWPFQGLIEFQ 1222 (1455)
Q Consensus 1145 ~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~--~~~~~~~~~~wp~~g~I~f~ 1222 (1455)
.. ..++|.+|++++|++++++.+++++++.+++|+.|+|+||+.+|.++|+|+ ..+...||++||.+|+|+|+
T Consensus 1068 ~~-----~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~ 1142 (1381)
T KOG0054|consen 1068 SG-----LISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFE 1142 (1381)
T ss_pred CC-----CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEE
Confidence 21 146999999999999999999999999999999999999999999998883 22223388899999999999
Q ss_pred EEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCC
Q 000511 1223 NVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQS 1302 (1455)
Q Consensus 1223 nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQd 1302 (1455)
|++++|+|+.|+|||||||+|+||||||||||||||||||+++|+|+.||.+|+|.|||+||+++++++||+++++||||
T Consensus 1143 ~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQd 1222 (1381)
T KOG0054|consen 1143 DLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQD 1222 (1381)
T ss_pred EeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecc
Q 000511 1303 PFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDEC 1380 (1455)
Q Consensus 1303 p~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEa 1380 (1455)
|+||+||+|+||||+++++|+|||+|||+|+|+++++++ |||+.|.|+|.|||.||||++||||||||++|||+||||
T Consensus 1223 PvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEA 1302 (1381)
T KOG0054|consen 1223 PVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEA 1302 (1381)
T ss_pred CceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecc
Confidence 999999999999999999999999999999999999998 999999999999999999999999999999999999999
Q ss_pred CcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhhC
Q 000511 1381 TANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1454 (1455)
Q Consensus 1381 TS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~g 1454 (1455)
||++|++||..||++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|++|+++++|.|++++++.+
T Consensus 1303 TAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~ 1376 (1381)
T KOG0054|consen 1303 TASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAA 1376 (1381)
T ss_pred cccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887653
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.6e-210 Score=2127.72 Aligned_cols=1425 Identities=31% Similarity=0.524 Sum_probs=1180.2
Q ss_pred CccCCCCcc-ccccc------cccchhhhHHHHHhhhhhHHH-HHhhhc-ccc-cCCcccchhhHHHHHHHHHHHHHHHH
Q 000511 2 DFICPNSPF-VWDGS------TFSKCFDDMILDFATNMVTIF-IILIIG-ITQ-RSPRQNQRINLMEKVFLHILPLVGAC 71 (1455)
Q Consensus 2 ~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~~k~~~~~~~~~~~~ 71 (1455)
+-+|+.... +|.+. .+.+||++..+..+++..... ..+.+- .++ .+...+..+..+.|+.+.++++..++
T Consensus 7 ~~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1622)
T PLN03130 7 DWYCRPVPNGVWAKKVDNAFGAYTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQRFCLRSKWYNYFLALLAAYCTA 86 (1622)
T ss_pred hhhcCCCccCCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHhccccccCCccccchHHHHHHHHHHHHHHH
Confidence 347964322 35553 466999995444444433332 111111 121 12222233356666666555544333
Q ss_pred HHHHHHHHH---HHHhcc-CccccchH-HHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHH---HHHHHHHHhH
Q 000511 72 LSSVDVILL---LKEKLH-GEFVSYHE-WLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIK---PVMGILHQLV 143 (1455)
Q Consensus 72 ~~~~~~~~~---~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~~~~~~~---~~~~~~~~rt 143 (1455)
...+..... ..+... +....+.. +++.++..++++++.++.+.||.|+.+++..+.+||++. +++.++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 164 (1622)
T PLN03130 87 EPLFRLVMGISVLNLDGQTSLPPFEIVSLIVEALTWCSMLVMIGVETKIYIREFRWYVRFAVIYVLVGDAVMLNLVLS-- 164 (1622)
T ss_pred HHHHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeehhHHHhhHHHHHHHHHH--
Confidence 333221111 011110 11122333 566777888888788889999999999999999999998 77776621
Q ss_pred Hhhhhhhhh---hhhHHHHHHHHHHHHHHHHHHhhccccCcccccc---ccc------ccCCCCCCCCCCCCCChhHHHH
Q 000511 144 TFSSFEVLK---CLKEICLVLLDIMFGISINIIRVKRASSRRSSIE---ESL------LSVDGDVEEDCNTDSSYWDLMA 211 (1455)
Q Consensus 144 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~------~~~~~~~~~~~e~~~~~~s~~~ 211 (1455)
..+.... .. ....+++.+++.++.+ ...+..++..... .+. -+.....+++||+++|++||++
T Consensus 165 --~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~ 239 (1622)
T PLN03130 165 --VKEYYSSFVLYL-YISEVAAQVLFGILLL--VYFPNLDPYPGYTPIGSESVDDYEYEELPGGEQICPERHANIFSRIF 239 (1622)
T ss_pred --HHHHHhccccce-ehhHHHHHHHHHHHHH--HHHhcCCCCcccccccccccccccccCCcccCCCCcccccCHHHHHH
Confidence 1111111 11 1222333333333221 1123222211110 010 0001112258999999999999
Q ss_pred HHhhHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCcchHHHHHHHHhHhHHHHHHHHHHHHHHH
Q 000511 212 FKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIG 291 (1455)
Q Consensus 212 f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~ 291 (1455)
|||++|++++|||++|+.+|||+++++++++.+.++|++.|+++. + +++++|+++++++|++.++..++++++.+++.
T Consensus 240 F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~ 317 (1622)
T PLN03130 240 FGWMTPLMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEEL-K-KPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQ 317 (1622)
T ss_pred HHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHh-c-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999875 2 35689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCh
Q 000511 292 FAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSD 371 (1455)
Q Consensus 292 ~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~ 371 (1455)
+++|++++.+++++.+....+.++++++++++..++.+++.++|.+...+++.++|+.+...+|+|+++++...+++.++
T Consensus 318 ~~~P~ll~~li~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~ 397 (1622)
T PLN03130 318 FVGPLLLNLLLESMQNGEPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTS 397 (1622)
T ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCH
Confidence 99999999999999764444567777777777777777777888888899999999999999999999999988888899
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 372 GEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDE 451 (1455)
Q Consensus 372 g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 451 (1455)
|+++|+|++|++++......+|.+|..|+++++++++||..+|+++++|++++++++|++.++++++++.++++++.+|+
T Consensus 398 G~ivnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~ 477 (1622)
T PLN03130 398 GKITNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDK 477 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHH
Q 000511 452 RIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMV 531 (1455)
Q Consensus 452 R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~L~~~~~ 531 (1455)
|++.++|+++|||+||+||||+.+.+++++.|++|++..++..+..++..+++...|.++++++|++|.+.++.+|++.+
T Consensus 478 r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~v 557 (1622)
T PLN03130 478 RIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARA 557 (1622)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999988888888888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEcceEee
Q 000511 532 FTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSW 611 (1455)
Q Consensus 532 ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w 611 (1455)
|+++++++.+..|+..+|..+..+.++++|++||++||..+|..+... .+. ......|+++|++|+|
T Consensus 558 f~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~----~~~---------~~~~~~I~~~nvsf~y 624 (1622)
T PLN03130 558 FTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPN----PPL---------EPGLPAISIKNGYFSW 624 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC----Ccc---------cCCCCceEEEeeEEEc
Confidence 999999999999999999999999999999999999998765422100 000 0122469999999999
Q ss_pred cCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC-cEEEEcCcEEEEcCCCCCCCcCHHHHhcc
Q 000511 612 YCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH-GSIHASGSIAYVPQVPWILSGTIRDNILF 690 (1455)
Q Consensus 612 ~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~-G~i~~~~~i~y~~Q~p~l~~~ti~~nI~~ 690 (1455)
+.+++ +++|+|+||++++|++++|+||+|||||||+++|+|+++|++ |+|.++++||||+|+|||||+||||||+|
T Consensus 625 ~~~~~---~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~f 701 (1622)
T PLN03130 625 DSKAE---RPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILF 701 (1622)
T ss_pred cCCCC---CceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhC
Confidence 75432 245999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHH
Q 000511 691 GKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILS 770 (1455)
Q Consensus 691 g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~ 770 (1455)
|+++|+++|++++++|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++|++
T Consensus 702 g~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~ 781 (1622)
T PLN03130 702 GSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFD 781 (1622)
T ss_pred CCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhhh--hhc-ccccc
Q 000511 771 NAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQ--EMR-TNASS 847 (1455)
Q Consensus 771 ~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~ 847 (1455)
+|+.+ .++++|+|+|||+++.++.||+|++|++|+++++|+++|+.+..+.+..+..+.....+.... +.. .....
T Consensus 782 ~~l~~-~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 860 (1622)
T PLN03130 782 KCIKD-ELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEEDDQTSS 860 (1622)
T ss_pred HHhhH-HhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhccccccccccccccccccccc
Confidence 98766 567899999999999999999999999999999999999987654443322111000000000 000 00000
Q ss_pred hhh-h---hhhhcccc--cCCCcchhhHHHHHHHhcCcchhHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHhhhhhhhhh
Q 000511 848 ANK-Q---ILLQEKDV--VSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGW-FITLVICLSAILMQASRNGNDLWLSY 920 (1455)
Q Consensus 848 ~~~-~---~~~~~~~~--~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~wl~~ 920 (1455)
... . ........ .+..+......++|+++.|.+++++|++|+++.|. +.+++++++.++.++...++++|+++
T Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 940 (1622)
T PLN03130 861 KPVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSE 940 (1622)
T ss_pred ccccccccccccccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 00000000 00000112234567788999999999999998653 34444455666778888889999999
Q ss_pred hhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHh
Q 000511 921 WVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSS 1000 (1455)
Q Consensus 921 w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~ 1000 (1455)
|++.... ......+|+++|++++++..++.+++.+.+.+.+.+++.++|++++++++++|++||+++|+|+|+|||++
T Consensus 941 w~~~~~~--~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~ 1018 (1622)
T PLN03130 941 WTDQGTP--KTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAK 1018 (1622)
T ss_pred HHhcccc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHH
Confidence 9985322 12234578889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHh
Q 000511 1001 DLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTET 1080 (1455)
Q Consensus 1001 D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Et 1080 (1455)
|++.+|..++..+..++..++.+++.++++++..|+++++++|+.++++.++++|.+++|++++++.++++|+++|+.|+
T Consensus 1019 Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Et 1098 (1622)
T PLN03130 1019 DLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEA 1098 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 99999999999999999999999998888888888888888898888888999999999999999999999999999999
Q ss_pred hcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHH
Q 000511 1081 LNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGL 1160 (1455)
Q Consensus 1081 l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl 1160 (1455)
++|+.|||+|+++++|.+++.+..|.+++..+.....++|++.++++++++++.+.+.+.+.... ........++.+|+
T Consensus 1099 l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~-~~~~~~~~~~~~G~ 1177 (1622)
T PLN03130 1099 LNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNG-RAENQAAFASTMGL 1177 (1622)
T ss_pred hCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccccchhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999887766555544443211 10011122678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccc--cCCCCCCCCCCCccEEEEEEEEEecCCCCcceee
Q 000511 1161 ALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHD 1238 (1455)
Q Consensus 1161 ~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~--~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~ 1238 (1455)
+++|++.+...++++.+.+.++|+.++|++|+.+|.+.|+|+.. +...+++.||.+|.|+|+||+|+|+++.++||+|
T Consensus 1178 ~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~ 1257 (1622)
T PLN03130 1178 LLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHG 1257 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecc
Confidence 99999999999999999999999999999999999998887532 2234556799999999999999998877789999
Q ss_pred eeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCC
Q 000511 1239 INFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH 1318 (1455)
Q Consensus 1239 isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~ 1318 (1455)
+||+|+||||||||||||||||||+++|+|+|+|++|+|.|||+||++++++++|++|++|||||+||+|||||||||++
T Consensus 1258 is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~ 1337 (1622)
T PLN03130 1258 LSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN 1337 (1622)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHH
Q 000511 1319 MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAI 1396 (1455)
Q Consensus 1319 ~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i 1396 (1455)
+++|+|+|+|+++++++++++++ ||||.++|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|
T Consensus 1338 ~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I 1417 (1622)
T PLN03130 1338 EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTI 1417 (1622)
T ss_pred CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhhCC
Q 000511 1397 SSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRASTM 1455 (1455)
Q Consensus 1397 ~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~g~ 1455 (1455)
++.+++||+|+||||++|+++||||+|||+|+|+|+|+|+||+++++|.|++|++++|.
T Consensus 1418 ~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1418 REEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGA 1476 (1622)
T ss_pred HHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcCh
Confidence 99999999999999999999999999999999999999999999878899999998873
No 3
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.3e-209 Score=2129.07 Aligned_cols=1407 Identities=31% Similarity=0.515 Sum_probs=1195.3
Q ss_pred ccchhhhHHHHHhhhhhHHH-HHhhhc-ccccCCc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-cc
Q 000511 17 FSKCFDDMILDFATNMVTIF-IILIIG-ITQRSPR-QNQRINLMEKVFLHILPLVGACLSSVDVILLLKEKLHGEFV-SY 92 (1455)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 92 (1455)
+.+||.+..+..+++.++.+ ....+- ..++..+ ....+.+..|++...++++ ++++. ++...|..+.... .+
T Consensus 23 ~t~~f~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~ 98 (1522)
T TIGR00957 23 FTKCFQNTVLAWVPCFYLWVCFPCYFLYLSRHDRGYIQMTHLNKTKTALGFLLWI---VCWAD-LFYSFWERSHGRAPAP 98 (1522)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcCCcchHHHHHHHHHHHHHH---HHHHH-HHHHHHhccccccccc
Confidence 55999998887766666555 221111 1122222 4455667778776655443 23221 2333333322222 25
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhHHhhhhhhhhh---hhHHHHHHHHHHHHHH
Q 000511 93 HEWLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIKPVMGILHQLVTFSSFEVLKC---LKEICLVLLDIMFGIS 169 (1455)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~~~~~~~~~~~~~~~rt~~~~~~~~~~---~~~~~~~~~~~~~~~~ 169 (1455)
.+++++++.+++++.++++++.||.|+.|||.++.+||++++++|++++||+|........ ......+++.++++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1522)
T TIGR00957 99 VFLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALVCALAILRSKILLALKEDAIVDPFRDTTFYIYFALVLS 178 (1522)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhcccCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccccccceehhhHHHHHHHHHH
Confidence 6788999999999999999999999999999999999999999999999999875321100 0012233344444443
Q ss_pred HHHHhhccc-cCcccccccccccCCCCCCCCCCCCCChhHHHHHHhhHHHHHccccCCCCCCCCCCCCCCCChhHHHHHH
Q 000511 170 INIIRVKRA-SSRRSSIEESLLSVDGDVEEDCNTDSSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKL 248 (1455)
Q Consensus 170 ~~~~~~~~~-~~k~~~~~~~~~~~~~~~~~~~e~~~~~~s~~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~ 248 (1455)
.++. |. .+|+..+.+ . .++.+++||+++|++||++|||+||++++|||++|+.+|||+++++++++.+.++|
T Consensus 179 ~~~~---~~~~~~~~~~~~-~---~~~~~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~ 251 (1522)
T TIGR00957 179 QLVL---SCFSDKSPLFSE-T---NHDPNPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLNKEDTSEMVVPVL 251 (1522)
T ss_pred HHHH---HhhcCCCCcccc-c---cccCCCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCCHhHhHHHHHHHH
Confidence 3222 22 223222211 0 11112479999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhc---------------------------------------CCCCcchHHHHHHHHhHhHHHHHHHHHHHHH
Q 000511 249 LSCWQAQRSC---------------------------------------NCTNPSLVRAICCAYGYPYICLGLLKVVNDS 289 (1455)
Q Consensus 249 ~~~w~~~~~~---------------------------------------~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~ 289 (1455)
++.|+++.++ +.++++|+++++++|++.++..++++++.++
T Consensus 252 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~l~~~~~~l~~~~ 331 (1522)
T TIGR00957 252 VENWKKECKKTRKQPVSAVYGKKDPSKPKGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYFLMSFCFKAIHDL 331 (1522)
T ss_pred HHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccCCccHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999875310 1134789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC
Q 000511 290 IGFAGPLLLNKLIKFLQQG-SGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSE 368 (1455)
Q Consensus 290 ~~~~~P~ll~~li~~~~~~-~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~ 368 (1455)
+.+++|++++.+++++.++ .+.+.||++++++++++++.+++.++|.|...+++.++|++|+..||+|+|+++...+++
T Consensus 332 ~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~ 411 (1522)
T TIGR00957 332 MMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITNSARKS 411 (1522)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhcCC
Confidence 9999999999999999763 344568999999999999999999999999999999999999999999999999998888
Q ss_pred CChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 369 FSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQ 448 (1455)
Q Consensus 369 ~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1455)
.++|+++|+|++|++++..+...+|.+|..|++++++++++|.++|+++++|++++++++|++.++++++++.++++++.
T Consensus 412 ~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (1522)
T TIGR00957 412 STVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKS 491 (1522)
T ss_pred CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCC
Q 000511 449 KDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALM--GHQL 526 (1455)
Q Consensus 449 ~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~~L 526 (1455)
+|+|++.++|+++|||+||+||||+.+.+++++.|++|++..++..+...+..+.+...|.++.+++|++|.+. ++.|
T Consensus 492 ~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l 571 (1522)
T TIGR00957 492 KDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVDENNIL 571 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 99999999999999999999999999999999999999999999999888888878888888888999999876 4679
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEc
Q 000511 527 DAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQD 606 (1455)
Q Consensus 527 ~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 606 (1455)
+++.+|+++++++++..|+..+|..++.+.++.+|++||++||+.++.++..... .... ......++++|
T Consensus 572 ~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~-~~~~---------~~~~~~i~~~~ 641 (1522)
T TIGR00957 572 DAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIER-RTIK---------PGEGNSITVHN 641 (1522)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccc-cccC---------CCCCCcEEEEE
Confidence 9999999999999999999999999999999999999999999876543211000 0000 01123699999
Q ss_pred ceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcCcEEEEcCCCCCCCcCHHH
Q 000511 607 ATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRD 686 (1455)
Q Consensus 607 ~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~p~l~~~ti~~ 686 (1455)
++|+|+.+ + +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+||||+|+||++++||||
T Consensus 642 ~~~~~~~~-~---~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~~Ti~e 717 (1522)
T TIGR00957 642 ATFTWARD-L---PPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQNDSLRE 717 (1522)
T ss_pred eEEEcCCC-C---CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECCEEEEEcCCccccCCcHHH
Confidence 99999742 1 2359999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHH
Q 000511 687 NILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVAR 766 (1455)
Q Consensus 687 nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~ 766 (1455)
||.||.++|+++|++++++|++.+|++.+|+||+|.+|++|.+|||||||||+||||+|++|+|+|||||||+||+++++
T Consensus 718 NI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~ 797 (1522)
T TIGR00957 718 NILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGK 797 (1522)
T ss_pred HhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcC-cccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHhccccCcccccccch--hh---hhh---
Q 000511 767 WILSNAIMG-PHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDT--SL---HMQ--- 837 (1455)
Q Consensus 767 ~i~~~~~~~-~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~--~~---~~~--- 837 (1455)
++++.+... .+.+++|+|+|||+++.++.||+|++|++|+++++|+++++.+..+.+..+..+... .. +..
T Consensus 798 ~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 877 (1522)
T TIGR00957 798 HIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTA 877 (1522)
T ss_pred HHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHhhccccccccccccccc
Confidence 999986421 156789999999999999999999999999999999999997654433222110000 00 000
Q ss_pred ---hhhhcc-------cc---cchhh-h------h--hh---h---cc--cccCCCcchhhHHHHHHHhcCcchhHHHHH
Q 000511 838 ---KQEMRT-------NA---SSANK-Q------I--LL---Q---EK--DVVSVSDDAQEIIEVEQRKEGRVELTVYKN 887 (1455)
Q Consensus 838 ---~~~~~~-------~~---~~~~~-~------~--~~---~---~~--~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~ 887 (1455)
.+..+. .. ..+.. . . .. . .. +.....+...+..++|.++.|.+++++|++
T Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~ 957 (1522)
T TIGR00957 878 LVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWD 957 (1522)
T ss_pred cccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHHHHHHhcCcccHHHHHH
Confidence 000000 00 00000 0 0 00 0 00 000000011234456777889999999999
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 888 YAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAA 967 (1455)
Q Consensus 888 y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (1455)
|+++.|+...++++++.++.+++..+.++|+++|++............+|+++|++++++..++.++..+++.+.+.+++
T Consensus 958 Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~ 1037 (1522)
T TIGR00957 958 YMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQAS 1037 (1522)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999887776666777777888889999999999753211122334567889999999999998888888899999999
Q ss_pred HHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 000511 968 VKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFI 1047 (1455)
Q Consensus 968 ~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~ 1047 (1455)
+++|++++++++++|++||+++|+|+++|||++|++.+|+.++..+..++..++.+++.++++++..|+++++++|++++
T Consensus 1038 ~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~ 1117 (1522)
T TIGR00957 1038 RVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLL 1117 (1522)
T ss_pred HHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888999998888998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1048 YSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQL 1127 (1455)
Q Consensus 1048 ~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~ 1127 (1455)
++.++++|.+++|++++++.++++|+++++.|+++|+.|||+||+|++|.+++.+..|.++++.+...+.++|++.++++
T Consensus 1118 ~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1197 (1522)
T TIGR00957 1118 YFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLEC 1197 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccc--c
Q 000511 1128 LAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--G 1205 (1455)
Q Consensus 1128 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~--~ 1205 (1455)
++++++.+++.+.++. .+..++|.+|++++|+..+..++.++++.++++|+.++|++|+.+|.+.++|+.. +
T Consensus 1198 ~~~~~~~~~~~~~v~~------~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~ 1271 (1522)
T TIGR00957 1198 VGNCIVLFAALFAVIS------RHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQ 1271 (1522)
T ss_pred HHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc
Confidence 8876555554444421 2345799999999999999999999999999999999999999999988877531 2
Q ss_pred CCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCC
Q 000511 1206 YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII 1285 (1455)
Q Consensus 1206 ~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~ 1285 (1455)
...++++||.+|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+++|++|+|.|||+||+
T Consensus 1272 ~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~ 1351 (1522)
T TIGR00957 1272 ETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIA 1351 (1522)
T ss_pred CCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEcc
Confidence 23455679999999999999999877778999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHH
Q 000511 1286 NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLIC 1363 (1455)
Q Consensus 1286 ~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~ 1363 (1455)
+++++++|++|++|||||+||+||||+||||+++++|+|+|+|+++|+++++++++ ||||.++|+|.|||||||||+|
T Consensus 1352 ~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~ 1431 (1522)
T TIGR00957 1352 KIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVC 1431 (1522)
T ss_pred ccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCC
Q 000511 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1364 LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~ 1443 (1455)
|||||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++++++||||+|||+|+|+|+|+|+||+++ +
T Consensus 1432 LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~ 1510 (1522)
T TIGR00957 1432 LARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-R 1510 (1522)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999997 5
Q ss_pred cHHHHHHHhhCC
Q 000511 1444 SVFSSFVRASTM 1455 (1455)
Q Consensus 1444 s~f~~l~~~~g~ 1455 (1455)
|.|++|++++|.
T Consensus 1511 ~~f~~l~~~~g~ 1522 (1522)
T TIGR00957 1511 GIFYSMAKDAGL 1522 (1522)
T ss_pred CHHHHHHHHcCC
Confidence 899999999884
No 4
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.4e-206 Score=2092.58 Aligned_cols=1423 Identities=30% Similarity=0.518 Sum_probs=1174.8
Q ss_pred cCCCCc-cccccc------cccchhhhHHHHHhhhhhHHH-HHhhhc-c-cccCCcccchhhHHHHHHHHHHHHHHHHHH
Q 000511 4 ICPNSP-FVWDGS------TFSKCFDDMILDFATNMVTIF-IILIIG-I-TQRSPRQNQRINLMEKVFLHILPLVGACLS 73 (1455)
Q Consensus 4 ~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 73 (1455)
+|+... ..|.+. .+.+||++..+...++..... ..+.+- . ..++...+..+..+.|+.+.++++...+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (1495)
T PLN03232 9 YCKPIAEGFWEKTVDGAFGAYTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAKAQIYVLRKKYYNCVLGILACYCVVEP 88 (1495)
T ss_pred hcCCccccCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccccCCccccchHHHHHHHHHHHHHHHHH
Confidence 785322 245543 356999995444444433332 211111 1 012222222235666666655554433333
Q ss_pred HHHHHHH---HHHhcc-CccccchH-HHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHH---HHHHHHHHhHHh
Q 000511 74 SVDVILL---LKEKLH-GEFVSYHE-WLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIK---PVMGILHQLVTF 145 (1455)
Q Consensus 74 ~~~~~~~---~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~~~~~~~---~~~~~~~~rt~~ 145 (1455)
.+..... ..+... .....+.. +++.++..++++.+..+.+.||.|+.+++..+.+||++. +++.++. .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 164 (1495)
T PLN03232 89 VLRLVMGISLFDMDEETDLPPFEVASLMVEAFAWFSMLVLIGLETKQYVKEFRWYVRFGVVYVLVADAVLLDLVL----P 164 (1495)
T ss_pred HHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeehhHhhhhHHHHHHHH----H
Confidence 3221110 111111 11122333 666788888888777899999999999999999999999 7777762 1
Q ss_pred hhhhhhh---hhhHHHHHHHHHHHHHHHHHHhhccccCcccccc---ccccc-----C-CCCCCCCCCCCCChhHHHHHH
Q 000511 146 SSFEVLK---CLKEICLVLLDIMFGISINIIRVKRASSRRSSIE---ESLLS-----V-DGDVEEDCNTDSSYWDLMAFK 213 (1455)
Q Consensus 146 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~-----~-~~~~~~~~e~~~~~~s~~~f~ 213 (1455)
..+.... .. ....+++.+.+.+.. ....|..++..... .+..+ . +...+++||+++|+|||++||
T Consensus 165 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~f~ 241 (1495)
T PLN03232 165 LKNSINRTALYL-CISSRCCQALFGILL--LVYIPELDPYPGYHILNNESLDNVEYDALRGGENICPERYASIFSRIYFS 241 (1495)
T ss_pred HHHHHhccccce-ehhHHHHHHHHHHHH--HHhcccCCCCCcccccccccccccccccccccCCCCccccCCHHHHHHHH
Confidence 1111111 11 122222233222221 11123222211111 01111 0 001226899999999999999
Q ss_pred hhHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCcchHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 000511 214 SIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFA 293 (1455)
Q Consensus 214 Wl~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~ 293 (1455)
|++|++++||+++|+.+|||+|+++++++.+.++|++.|+++. + +++++|+++++++|++.++..++++++.+++.++
T Consensus 242 w~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~ 319 (1495)
T PLN03232 242 WMTPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEES-R-RPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFV 319 (1495)
T ss_pred HHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhh-c-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999865 2 3568999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhH
Q 000511 294 GPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGE 373 (1455)
Q Consensus 294 ~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~ 373 (1455)
+|++++++++++++++..+.++.+++++++..++.+++.++|.+...+++.++|+.+...+|+|+++++...+++.++|+
T Consensus 320 ~P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~ 399 (1495)
T PLN03232 320 GPVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGK 399 (1495)
T ss_pred HHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHH
Confidence 99999999999976444456788888888888888999889999999999999999999999999999998888889999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 374 IQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERI 453 (1455)
Q Consensus 374 i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~ 453 (1455)
++|+|++|++++.+....+|.+|..|++++++++++|+.+|++++++++++++++|++.++++++++.++++++.+|+|.
T Consensus 400 i~n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~ 479 (1495)
T PLN03232 400 VTNMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRV 479 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHH
Q 000511 454 RRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFT 533 (1455)
Q Consensus 454 ~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~L~~~~~ft 533 (1455)
+.++|+++|||+||+||||+.+.+++++.|++|++..++.....++..+++...|.++++++|++|.+.++.+|++.+|+
T Consensus 480 ~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~ 559 (1495)
T PLN03232 480 GIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAFT 559 (1495)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999888888777777888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEcceEeecC
Q 000511 534 CLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYC 613 (1455)
Q Consensus 534 ~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~ 613 (1455)
++++++.+..|+..+|..+..+.++++|++||++||+.++..+... .+. ......|+++|++|+|+.
T Consensus 560 ~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~----~~~---------~~~~~~I~~~~vsF~y~~ 626 (1495)
T PLN03232 560 SLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN----PPL---------QPGAPAISIKNGYFSWDS 626 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc----CCc---------CCCCCcEEEEeeEEEcCC
Confidence 9999999999999999999999999999999999998665321100 000 012346999999999985
Q ss_pred CCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcE-EEEcCcEEEEcCCCCCCCcCHHHHhccCC
Q 000511 614 NNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS-IHASGSIAYVPQVPWILSGTIRDNILFGK 692 (1455)
Q Consensus 614 ~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~-i~~~~~i~y~~Q~p~l~~~ti~~nI~~g~ 692 (1455)
.++ +++|+|+||++++|++++|+||+|||||||+++|+|+++|++|. +.++++||||+|+|||||+||||||+||+
T Consensus 627 ~~~---~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~ 703 (1495)
T PLN03232 627 KTS---KPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGS 703 (1495)
T ss_pred CCC---CceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCC
Confidence 322 34599999999999999999999999999999999999999975 56789999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHh
Q 000511 693 NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNA 772 (1455)
Q Consensus 693 ~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~ 772 (1455)
++|+++|++++++|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||+++++++++++
T Consensus 704 ~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~ 783 (1495)
T PLN03232 704 DFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSC 783 (1495)
T ss_pred ccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhhhh-hcccccc-h-h
Q 000511 773 IMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQE-MRTNASS-A-N 849 (1455)
Q Consensus 773 ~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-~ 849 (1455)
+.+ .++++|+|+|||+++.++.||+|++|++|+++++|+++|+.+..+.+..+..+........+.. ....... . .
T Consensus 784 l~~-~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (1495)
T PLN03232 784 MKD-ELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKLGPT 862 (1495)
T ss_pred hhh-hhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhccccccccccccccccccccccc
Confidence 766 5688999999999999999999999999999999999999876544433221111000000000 0000000 0 0
Q ss_pred hhhhhhcc---cccCCCcchhhHHHHHHHhcCcchhHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 000511 850 KQILLQEK---DVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG-WFITLVICLSAILMQASRNGNDLWLSYWVDTT 925 (1455)
Q Consensus 850 ~~~~~~~~---~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~ 925 (1455)
......+. +..+..+......++|+++.|.+++++|++|+++.| ++.+++++++.++.++...++++|+++|.+..
T Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~ 942 (1495)
T PLN03232 863 VTIDVSERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQS 942 (1495)
T ss_pred ccccccccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 00000000 000000011124456778899999999999999865 34444555566677788888999999998753
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhh
Q 000511 926 GSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMI 1005 (1455)
Q Consensus 926 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~i 1005 (1455)
.. ......+|+++|++++++..++.+++.+.+...+.+++.++|++++++++++|++||+++|+|+++|||++|++.+
T Consensus 943 ~~--~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~i 1020 (1495)
T PLN03232 943 TP--KSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDI 1020 (1495)
T ss_pred CC--CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHH
Confidence 21 1223467999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchH
Q 000511 1006 DDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSS 1085 (1455)
Q Consensus 1006 d~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~ 1085 (1455)
|+.++..+..++..++.+++.++++++..++++++++|+.++++.++.+|.+++|++++.+..+++|+++++.|+++|+.
T Consensus 1021 d~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~ 1100 (1495)
T PLN03232 1021 DRNVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLS 1100 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChH
Confidence 99999999999988888888888887777888888888888888889999999999999999999999999999999999
Q ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHH
Q 000511 1086 TIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYA 1165 (1455)
Q Consensus 1086 tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~ 1165 (1455)
|||+|+++++|.+++.+..|.+++..+.....++|+..++++++++++.+.+...+.. .+........++.+|++++|+
T Consensus 1101 tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~g~~~~~~ 1179 (1495)
T PLN03232 1101 SIRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLR-NGNAENQAGFASTMGLLLSYT 1179 (1495)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccccchHHHHHHHHHH
Confidence 9999999999999999999999999999889999999999887765554444444332 111101112356788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccc--cCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEE
Q 000511 1166 APIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTI 1243 (1455)
Q Consensus 1166 ~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~--~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I 1243 (1455)
..+..+++++++.+.++|+.++|+||+.++.+.|+|+.. ....++++||.+|.|+|+||+|+|+++.++||+|+||+|
T Consensus 1180 ~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I 1259 (1495)
T PLN03232 1180 LNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFV 1259 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEE
Confidence 999999999999999999999999999999998887532 222345679999999999999999887778999999999
Q ss_pred eCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCCCChH
Q 000511 1244 EGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDL 1323 (1455)
Q Consensus 1244 ~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ 1323 (1455)
+||||||||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||++|+|||||||||+++++|+
T Consensus 1260 ~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sde 1339 (1495)
T PLN03232 1260 SPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDA 1339 (1495)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC
Q 000511 1324 KIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK 1401 (1455)
Q Consensus 1324 ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~ 1401 (1455)
|+|+|+++++++++++++ ||||.++|+|.|||||||||+||||||+|+|+|||||||||+||.+||+.||++|++.++
T Consensus 1340 ei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~ 1419 (1495)
T PLN03232 1340 DLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFK 1419 (1495)
T ss_pred HHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcC
Confidence 999999999999999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhhCC
Q 000511 1402 GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRASTM 1455 (1455)
Q Consensus 1402 ~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~g~ 1455 (1455)
+||+|+||||++|+++||||+|||+|+|+|+|+|+||+++++|.|++|++++|.
T Consensus 1420 ~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1420 SCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGP 1473 (1495)
T ss_pred CCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 999999999999999999999999999999999999999888899999998873
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=9.5e-195 Score=1975.58 Aligned_cols=1229 Identities=27% Similarity=0.459 Sum_probs=1073.8
Q ss_pred CCCCCCChhHHHHHHhhHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCcchHHHHHHHHhHhHH
Q 000511 199 DCNTDSSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYI 278 (1455)
Q Consensus 199 ~~e~~~~~~s~~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~ 278 (1455)
+||+++|+|||++|||+||++++||+++|+.+|||+|+++++++.+.++|++.|+++..++.++++|+++++++|+|+++
T Consensus 4 ~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~~l~~~~~~~~~ 83 (1490)
T TIGR01271 4 SPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELASAKKNPKLLNALRRCFFWRFV 83 (1490)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999987652334568999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 279 CLGLLKVVNDSIGFAGPLLLNKLIKFLQQGS--GHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQ 356 (1455)
Q Consensus 279 ~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~--~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~ 356 (1455)
..++++++.+++.+++|+++++++++++... ..+.+|++++++++++++.+++.+++.|...+++.++|++|...||+
T Consensus 84 ~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~ 163 (1490)
T TIGR01271 84 FYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYK 163 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999996422 23568899999999999999999999999999999999999999999
Q ss_pred HHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 357 KCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIAN 436 (1455)
Q Consensus 357 K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~ 436 (1455)
|+|+++....++.++|+++|+|++|++++..+...+|.+|..|+++++++++||+++|+++++|++++++++|++.++++
T Consensus 164 K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~ 243 (1490)
T TIGR01271 164 KTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQ 243 (1490)
T ss_pred HHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 437 LIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTF 516 (1455)
Q Consensus 437 ~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 516 (1455)
++.+.++++++.+|+|++.++|+|+|||+||+||||+.|.+++++.|++|++..++..++..+..+++...|.++++++|
T Consensus 244 ~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 323 (1490)
T TIGR01271 244 KMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVFLSV 323 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888888889999999999
Q ss_pred HHHHHhCCCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccC
Q 000511 517 GLFALMGHQLDAAMVFTCLALFNSLISPLN-SFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNF 595 (1455)
Q Consensus 517 ~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~-~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~ 595 (1455)
++|.+.++ ++++.+||+++++++++.|+. .+|..+..+.++.+|++||++||..+|.++...
T Consensus 324 ~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~---------------- 386 (1490)
T TIGR01271 324 VPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY---------------- 386 (1490)
T ss_pred HHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc----------------
Confidence 99988755 789999999999999999985 799999999999999999999998766432100
Q ss_pred CCCCceEEEEcceEeecCCC----------------c-c-----------cccccceeceeEecCCcEEEEEcCCCCcHH
Q 000511 596 NSKDMAVIMQDATCSWYCNN----------------E-E-----------EQNVVLNQVSLCLPKGSLVAVIGEVGSGKS 647 (1455)
Q Consensus 596 ~~~~~~i~~~~~sf~w~~~~----------------~-~-----------~~~~~l~~i~l~i~~g~~~~ivG~~GsGKS 647 (1455)
+.....++++|++|+|+... . . ..+++|+|+||+|++|++++|+||||||||
T Consensus 387 ~~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKS 466 (1490)
T TIGR01271 387 NLTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKS 466 (1490)
T ss_pred cCCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHH
Confidence 01123588999999996310 0 0 013579999999999999999999999999
Q ss_pred HHHHHHhcCccCCCcEEEEcCcEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000511 648 SLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKG 727 (1455)
Q Consensus 648 tll~~l~g~~~~~~G~i~~~~~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g 727 (1455)
|||++|+|+++|++|+|.++|+||||+|+||++++||+|||+||.++++++|++++++|+|++|++.+|+||+|.+|++|
T Consensus 467 TLl~~l~G~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g 546 (1490)
T TIGR01271 467 SLLMMIMGELEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGG 546 (1490)
T ss_pred HHHHHHhCCCCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeE
Q 000511 728 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 807 (1455)
Q Consensus 728 ~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i 807 (1455)
.+|||||||||+||||+|++|++|||||||||||+++++++++.|+.+ +.+++|+|+|||+++.++.||+|++|++|++
T Consensus 547 ~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~-~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i 625 (1490)
T TIGR01271 547 ITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCK-LMSNKTRILVTSKLEHLKKADKILLLHEGVC 625 (1490)
T ss_pred CCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-HhcCCeEEEEeCChHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999987655 5678999999999999999999999999999
Q ss_pred EEecCHHHHHhccccCccccc--------------------------c--c-----c-hh------hhhhhhhh------
Q 000511 808 KWIGSSADLAVSLYSGFWSTN--------------------------E--F-----D-TS------LHMQKQEM------ 841 (1455)
Q Consensus 808 ~~~g~~~~l~~~~~~~~~~~~--------------------------~--~-----~-~~------~~~~~~~~------ 841 (1455)
++.|+++++......+..... + . + .. ......+.
T Consensus 626 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1490)
T TIGR01271 626 YFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSII 705 (1490)
T ss_pred EEEcCHHHHHhcChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999998653211100000 0 0 0 00 00000000
Q ss_pred -------------------------c--ccccch------hh---------------------------------hh---
Q 000511 842 -------------------------R--TNASSA------NK---------------------------------QI--- 852 (1455)
Q Consensus 842 -------------------------~--~~~~~~------~~---------------------------------~~--- 852 (1455)
. .....+ .. ..
T Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1490)
T TIGR01271 706 LNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRG 785 (1490)
T ss_pred ccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhcccccccc
Confidence 0 000000 00 00
Q ss_pred -hhhcc--cc--------------c-------C-CC-------c---c---hhhHHHHHHHhcCcchhHHHHHHhhhhhH
Q 000511 853 -LLQEK--DV--------------V-------S-VS-------D---D---AQEIIEVEQRKEGRVELTVYKNYAKFSGW 894 (1455)
Q Consensus 853 -~~~~~--~~--------------~-------~-~~-------~---~---~~~~~~~e~~~~g~v~~~~y~~y~~~~g~ 894 (1455)
...+. +. . . .. + + .....++|+++.|.+++++|++|+++.|+
T Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~ 865 (1490)
T TIGR01271 786 ENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRN 865 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCc
Confidence 00000 00 0 0 00 0 0 01124456778899999999999998765
Q ss_pred -HHHHHHHHHHHHHHHHHhhhhhhhhhhhcccC-----C-CCC-----------CcchhhH-HHHHHHHHHHHHHHHHHH
Q 000511 895 -FITLVICLSAILMQASRNGNDLWLSYWVDTTG-----S-SQT-----------KYSTSFY-LVVLCIFCMFNSFLTLVR 955 (1455)
Q Consensus 895 -~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~-----~-~~~-----------~~~~~~~-l~~~~~~~~~~~~~~~~~ 955 (1455)
..+++++++.++.+++..++++|+.+|..... . .+. .....+| +.+|+++.++..++.+++
T Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1490)
T TIGR01271 866 LVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFR 945 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 44444456667778899999999999875210 0 000 0011233 445555555566777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHH
Q 000511 956 AFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQV 1035 (1455)
Q Consensus 956 ~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~ 1035 (1455)
.+++...+.+++.++|++++++++++|++||+++|+|+++|||++|++.+|+.+|..+..++..++.+++.++++++..|
T Consensus 946 ~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p 1025 (1490)
T TIGR01271 946 GLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQP 1025 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1036 FFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSEL 1115 (1455)
Q Consensus 1036 ~~~l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~ 1115 (1455)
+++++++|++++++.++++|.+++|++++++..+++|+++|+.|+++|+.|||+||++++|.+++.+..+.+++..+...
T Consensus 1026 ~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~ 1105 (1490)
T TIGR01271 1026 YIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYL 1105 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000511 1116 TASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY 1195 (1455)
Q Consensus 1116 ~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~ 1195 (1455)
+.++|+..++++++.+++..++++++. . ....+|.+|++++|++.+...++++++.+.++++.+.|++|+.+|
T Consensus 1106 ~~~~wl~~~~~~i~~~~~~~~~~l~~~-~------~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~ 1178 (1490)
T TIGR01271 1106 STLRWFQMRIDIIFVFFFIAVTFIAIG-T------NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKF 1178 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-H------hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998876544443333321 1 123467789999999999999999999999999999999999999
Q ss_pred hcCCcccccc----------------CCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChH
Q 000511 1196 MDVPQEELCG----------------YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGK 1259 (1455)
Q Consensus 1196 ~~~~~e~~~~----------------~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGK 1259 (1455)
.+.|+|+... ...+++.||..|.|+|+||+|+|+++.++||+|+||+|+|||||||||||||||
T Consensus 1179 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGK 1258 (1490)
T TIGR01271 1179 IDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGK 1258 (1490)
T ss_pred hcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCH
Confidence 9887764211 012345799999999999999999877899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHH
Q 000511 1260 SSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVE 1339 (1455)
Q Consensus 1260 STLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~ 1339 (1455)
|||+++|+|+++ ++|+|.|||+||++++++++|++|++|||||+||+||||+||||++.++|+++|+||++++++++++
T Consensus 1259 STLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~ 1337 (1490)
T TIGR01271 1259 STLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIE 1337 (1490)
T ss_pred HHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHH
Confidence 999999999998 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh
Q 000511 1340 AV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN 1417 (1455)
Q Consensus 1340 ~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~ 1417 (1455)
++ ||||.++|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++++.+
T Consensus 1338 ~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~ 1417 (1490)
T TIGR01271 1338 QFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLE 1417 (1490)
T ss_pred hCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh
Confidence 98 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhhC
Q 000511 1418 MDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1454 (1455)
Q Consensus 1418 ~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~g 1454 (1455)
||||+|||+|+|+|+|+|++|++ ++|.|++|+++++
T Consensus 1418 ~DrIlvL~~G~ivE~g~p~~Ll~-~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1418 CQQFLVIEGSSVKQYDSIQKLLN-ETSLFKQAMSAAD 1453 (1490)
T ss_pred CCEEEEEECCEEEEeCCHHHHHc-CCcHHHHHHHHhC
Confidence 99999999999999999999997 4789999999875
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.1e-184 Score=1875.57 Aligned_cols=1249 Identities=32% Similarity=0.529 Sum_probs=1066.2
Q ss_pred CCCCCCCChhHHHHHHhhHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHH----------HHHhhh----------
Q 000511 198 EDCNTDSSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSC----------WQAQRS---------- 257 (1455)
Q Consensus 198 ~~~e~~~~~~s~~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~----------w~~~~~---------- 257 (1455)
+.||+++||+.|+++.|++|++.+..|..|+.+|||+--.+.++-++..++.+. |+-...
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (1560)
T PTZ00243 59 PVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLDAS 138 (1560)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeecccc
Confidence 469999999999999999999999999999999999888887775554444332 421000
Q ss_pred -------------------------------c------------------------------------------------
Q 000511 258 -------------------------------C------------------------------------------------ 258 (1455)
Q Consensus 258 -------------------------------~------------------------------------------------ 258 (1455)
+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (1560)
T PTZ00243 139 SRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSSTG 218 (1560)
T ss_pred ccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeecccc
Confidence 0
Q ss_pred ---------CCCCcchHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHH
Q 000511 259 ---------NCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGS-GHLDGYVLAIALGLTSILK 328 (1455)
Q Consensus 259 ---------~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~-~~~~g~~l~~~l~~~~~~~ 328 (1455)
.++..+|+++++++|++.++..++++++.+++.+++|++++.++++++++. ....|++++++++++++++
T Consensus 219 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~~~ 298 (1560)
T PTZ00243 219 SVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQLIQ 298 (1560)
T ss_pred cccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHH
Confidence 012347999999999999999999999999999999999999999997633 3345788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 329 SFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERS--EFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVAL 406 (1455)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~--~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~ 406 (1455)
+++.++|.|...+.+.++|++|...+|+|+++++..... +.++|+++|+|++|++++..+..++|.+|..|+++++++
T Consensus 299 ~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~~~ 378 (1560)
T PTZ00243 299 SVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLLSI 378 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887654 568899999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHH
Q 000511 407 YLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSE 486 (1455)
Q Consensus 407 ~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~E 486 (1455)
++||+.+|+++++|++++++++|++.++++++.+.++++++++|+|++.++|+++|||+||+||||+.|.+++++.|++|
T Consensus 379 ~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~E 458 (1560)
T PTZ00243 379 LLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARE 458 (1560)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 487 VKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLT 566 (1455)
Q Consensus 487 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~ 566 (1455)
++.+++..+...+..+++.++|.++.+++|++|.+.+++||++.+||+++++++++.|+.++|..++.+.++.+|++||+
T Consensus 459 l~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~ 538 (1560)
T PTZ00243 459 LRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRIS 538 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCchh----hhh-----hcCCCCcc-----cCC---------------------------------CccCCCCC
Q 000511 567 RFLGCSEYKHE----LEQ-----AANSPSYI-----SNG---------------------------------LSNFNSKD 599 (1455)
Q Consensus 567 ~fL~~~e~~~~----~~~-----~~~~~~~~-----~~~---------------------------------~~~~~~~~ 599 (1455)
+||..+|.... ... ....+... .+. ........
T Consensus 539 ~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (1560)
T PTZ00243 539 TFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPS 618 (1560)
T ss_pred HHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccc
Confidence 99987763210 000 00000000 000 00000112
Q ss_pred ceEEEEcceEeecCCCc----------------------------------ccccccceeceeEecCCcEEEEEcCCCCc
Q 000511 600 MAVIMQDATCSWYCNNE----------------------------------EEQNVVLNQVSLCLPKGSLVAVIGEVGSG 645 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~----------------------------------~~~~~~l~~i~l~i~~g~~~~ivG~~GsG 645 (1455)
..+.++|++|+|+.... ...+++|+|+||++++|++++|+||||||
T Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsG 698 (1560)
T PTZ00243 619 PSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSG 698 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCc
Confidence 34677788887652100 01134799999999999999999999999
Q ss_pred HHHHHHHHhcCccCCCcEEEEcCcEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccC
Q 000511 646 KSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGE 725 (1455)
Q Consensus 646 KStll~~l~g~~~~~~G~i~~~~~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~ 725 (1455)
||||+++|+|+++|++|+|.++++||||+|+||++++||+|||.|+.++|+++|++++++|++++|++.+|+|++|.+|+
T Consensus 699 KSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~ 778 (1560)
T PTZ00243 699 KSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEIGE 778 (1560)
T ss_pred HHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHhcC
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred CCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCC
Q 000511 726 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 805 (1455)
Q Consensus 726 ~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G 805 (1455)
+|.+|||||||||+||||+|++|++||||||||+||++++++++++++.+ ..+++|+|++||+++.++.||+|++|++|
T Consensus 779 ~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~-~~~~~TvIlvTH~~~~~~~ad~ii~l~~G 857 (1560)
T PTZ00243 779 KGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLG-ALAGKTRVLATHQVHVVPRADYVVALGDG 857 (1560)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHH-hhCCCEEEEEeCCHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999987655 45689999999999999999999999999
Q ss_pred eEEEecCHHHHHhccccCcccccccchh----hhhhhhh---hccccc---c-h---hhhhhh-hcccccCCCcchhhHH
Q 000511 806 QVKWIGSSADLAVSLYSGFWSTNEFDTS----LHMQKQE---MRTNAS---S-A---NKQILL-QEKDVVSVSDDAQEII 870 (1455)
Q Consensus 806 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~---~-~---~~~~~~-~~~~~~~~~~~~~~~~ 870 (1455)
++.++|+++++..... +..+....... ......+ ...... . . ..+... ...+.........+..
T Consensus 858 ~i~~~G~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 936 (1560)
T PTZ00243 858 RVEFSGSSADFMRTSL-YATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRLM 936 (1560)
T ss_pred EEEEecCHHHHHhChH-HHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchhh
Confidence 9999999999875421 11111000000 0000000 000000 0 0 000000 0000000011122345
Q ss_pred HHHHHhcCcchhHHHHHHhhhhhHHH-HHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHH
Q 000511 871 EVEQRKEGRVELTVYKNYAKFSGWFI-TLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNS 949 (1455)
Q Consensus 871 ~~e~~~~g~v~~~~y~~y~~~~g~~~-~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 949 (1455)
++|+++.|.++|++|++|++..|... ++.+++..++.+++..++++|+++|++... ......|+++|+++.++..
T Consensus 937 ~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~----~~~~~~~l~~y~~~~~~~~ 1012 (1560)
T PTZ00243 937 TREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSF----KLSAATYLYVYLGIVLLGT 1012 (1560)
T ss_pred hHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----CCCcccHHHHHHHHHHHHH
Confidence 66777889999999999999876443 334444455667788889999999987431 1223468888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhh
Q 000511 950 FLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVV 1029 (1455)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~ 1029 (1455)
++.+++.+.....+.++++++|++++++++++|++|||++++|+++|||++|++.+|+.++..+..++..++.+++.+++
T Consensus 1013 ~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~ 1092 (1560)
T PTZ00243 1013 FSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILV 1092 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777788888999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHH
Q 000511 1030 LSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQR 1109 (1455)
Q Consensus 1030 ~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~ 1109 (1455)
+++..|+++++++|+.++++.++++|.+.+|++++.+..+++|+++++.|+++|+.|||+|++++.|.+++.+..|.+.+
T Consensus 1093 ~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~ 1172 (1560)
T PTZ00243 1093 TSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYS 1172 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 88889988888888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1110 TSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSL 1189 (1455)
Q Consensus 1110 ~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~ 1189 (1455)
..+.....++|+..+++++.++++.+++++.+..... ..+..++|.++++++|+..+..+++++++.+.++|+.+.|+
T Consensus 1173 ~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~ 1250 (1560)
T PTZ00243 1173 CSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTML--RATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSV 1250 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998876554443333322110 11234689999999999999999999999999999999999
Q ss_pred HHHHHhhcC-Ccccccc-------------------------CCCCC---CCCCCCccEEEEEEEEEecCCCCcceeeee
Q 000511 1190 ERVLEYMDV-PQEELCG-------------------------YQSLS---PDWPFQGLIEFQNVTMRYKPSLPAALHDIN 1240 (1455)
Q Consensus 1190 ~Ri~~~~~~-~~e~~~~-------------------------~~~~~---~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is 1240 (1455)
+|+.+|.+. |+|+... ...++ +.||..|.|+|+||+|+|+++.++||+|||
T Consensus 1251 eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vs 1330 (1560)
T PTZ00243 1251 ERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVS 1330 (1560)
T ss_pred HHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecce
Confidence 999999964 3332100 01111 235567999999999999887778999999
Q ss_pred EEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCCC
Q 000511 1241 FTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMN 1320 (1455)
Q Consensus 1241 l~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~~ 1320 (1455)
|+|+||||||||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||+||+||||+||||++++
T Consensus 1331 f~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~ 1410 (1560)
T PTZ00243 1331 FRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEA 1410 (1560)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccC-CCEEEEeccCcCCCHHHHHHHHHHHH
Q 000511 1321 DDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKS-SKVLCLDECTANVDAQTASILQNAIS 1397 (1455)
Q Consensus 1321 ~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~-~~ILlLDEaTS~lD~~te~~I~~~i~ 1397 (1455)
+|+|+|+|+++|+++++++++ ||||.++|+|.|||||||||||||||||++ |+|||||||||+||.+||+.||++|+
T Consensus 1411 sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~ 1490 (1560)
T PTZ00243 1411 SSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVM 1490 (1560)
T ss_pred CHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHH
Confidence 999999999999999999998 999999999999999999999999999996 89999999999999999999999999
Q ss_pred HhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhhC
Q 000511 1398 SECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1454 (1455)
Q Consensus 1398 ~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~g 1454 (1455)
+.|++||||+||||++++.+||||+|||+|+|+|+|+|+||+++++|.|++|++.+|
T Consensus 1491 ~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1491 SAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred HHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999987889999999876
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.4e-146 Score=1374.55 Aligned_cols=1156 Identities=21% Similarity=0.265 Sum_probs=849.6
Q ss_pred chHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhccCC------CchhHHHHHHHHHHHHHHHHHHH-H
Q 000511 264 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLL---NKLIKFLQQGS------GHLDGYVLAIALGLTSILKSFFD-T 333 (1455)
Q Consensus 264 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll---~~li~~~~~~~------~~~~g~~l~~~l~~~~~~~~~~~-~ 333 (1455)
++++-+..+-++++++..+..++..+.+..+|++. .++.+.+.... ....-.++.+.+.+..++.+++. .
T Consensus 14 ~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~~ 93 (1228)
T KOG0055|consen 14 SFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQVS 93 (1228)
T ss_pred chHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444556777777777788888888888755 34444433311 01111111122222222222222 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
Q 000511 334 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-----SFHDAWSLPFQIGVALYL 408 (1455)
Q Consensus 334 ~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-----~~~~~~~~pl~i~i~~~l 408 (1455)
.+.+...|...++|.... +..||.+.+.++....|++.+-|+.|+++|+++.. ++|.+-....-++++++.
T Consensus 94 c~~~~geRq~~riR~~yl----~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~ 169 (1228)
T KOG0055|consen 94 CWMRTGERQTARIRSKYL----KAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYY 169 (1228)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355556666666666555 55566777788878889999999999999998543 334333333334444433
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHH
Q 000511 409 LYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVK 488 (1455)
Q Consensus 409 L~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~ 488 (1455)
.|++. ++.+.+..++.......++.+.+...+.+++..+.-+...|++++||+|-.|+.|+...++..+.-+.-.+
T Consensus 170 -~W~Lt---lv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k 245 (1228)
T KOG0055|consen 170 -GWKLT---LVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALK 245 (1228)
T ss_pred -HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHH
Confidence 33332 33334444444556677888888888888888899999999999999999999999888887665444444
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 489 HLSTRKYLDAWCVFFW--ATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLT 566 (1455)
Q Consensus 489 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~ 566 (1455)
...+......+...+. .+.......+|||..++..+..+++.+|+.+...-.-...|.+....++.+..|+++..+|.
T Consensus 246 ~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~ 325 (1228)
T KOG0055|consen 246 FGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIF 325 (1228)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHH
Confidence 4444433333332222 12223445678887777788899999999886666667788888899999999999999999
Q ss_pred HHhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcH
Q 000511 567 RFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGK 646 (1455)
Q Consensus 567 ~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGK 646 (1455)
+-++.....+.... . + .......+.|+++|+.|+||++++. ++|+|+||+||+|+.+++||||||||
T Consensus 326 ~~i~~~~~i~~~~~-~--------~-~~~~~~~g~ief~nV~FsYPsRpdv---~Il~g~sl~i~~G~~valVG~SGsGK 392 (1228)
T KOG0055|consen 326 ETIDRKPSIDPYSK-G--------G-RVLSSIKGEIEFRNVCFSYPSRPDV---KILKGVSLKIPSGQTVALVGPSGSGK 392 (1228)
T ss_pred HHhcCCCCCCcccc-c--------C-CcccccccceEEEEEEecCCCCCcc---hhhCCeEEEeCCCCEEEEECCCCCCH
Confidence 98865432221110 0 0 0112356789999999999987543 45999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHH
Q 000511 647 SSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDI 712 (1455)
Q Consensus 647 Stll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di 712 (1455)
||++++|.|.|+|++|+|.++| +||.|+|+|.||++||+|||.||+| .+.++..++++....++.+
T Consensus 393 ST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi 472 (1228)
T KOG0055|consen 393 STLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFI 472 (1228)
T ss_pred HHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHH
Confidence 9999999999999999999987 5999999999999999999999985 4678888999999999999
Q ss_pred hhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccc
Q 000511 713 SLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA 792 (1455)
Q Consensus 713 ~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~ 792 (1455)
..+|+|++|.+||+|..|||||||||||||||.++|+||||||||||||+++++.+ +.++.. ..+|+|.|+|+||++.
T Consensus 473 ~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~V-q~ALd~-~~~grTTivVaHRLSt 550 (1228)
T KOG0055|consen 473 LKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVV-QEALDK-ASKGRTTIVVAHRLST 550 (1228)
T ss_pred HhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHH-HHHHHH-hhcCCeEEEEeeehhh
Confidence 99999999999999999999999999999999999999999999999999977654 454544 7789999999999999
Q ss_pred cccCCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhh-hh----hcccccch--hhhhhhhcccc--cCCC
Q 000511 793 ISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQK-QE----MRTNASSA--NKQILLQEKDV--VSVS 863 (1455)
Q Consensus 793 l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~--~~~~~~~~~~~--~~~~ 863 (1455)
+++||+|++|++|+|+|.|+|+||++..+.+.++...++.....+. ++ .+....+. ........+.. ....
T Consensus 551 IrnaD~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~ 630 (1228)
T KOG0055|consen 551 IRNADKIAVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLL 630 (1228)
T ss_pred hhccCEEEEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccc
Confidence 9999999999999999999999999888777665322211110000 00 00000000 00000000000 0000
Q ss_pred --cchhhHHHHHHHhcCcchhHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCC---CCcchhh
Q 000511 864 --DDAQEIIEVEQRKEGRVELTVYKNYAKF--SGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQ---TKYSTSF 936 (1455)
Q Consensus 864 --~~~~~~~~~e~~~~g~v~~~~y~~y~~~--~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~---~~~~~~~ 936 (1455)
...++..++...... ....++.-++. ..|..+++..+..++..+....-.+.+++..+...... .......
T Consensus 631 ~~~~~~e~~~~~~~~~~--~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~ 708 (1228)
T KOG0055|consen 631 SVKPEGEDPEEPVSEED--EKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRA 708 (1228)
T ss_pred ccccccccccccccccc--ccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHH
Confidence 000000000000000 11112233331 24555555544444444433333333333222111011 1122345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc--CChhhHHHHHHhhhhhhhcchhHHHH
Q 000511 937 YLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQ--TPGGRILNRFSSDLYMIDDSLPFILN 1014 (1455)
Q Consensus 937 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~--~~~G~ilnRfs~D~~~id~~l~~~l~ 1014 (1455)
|..+|++++++..++.++..+++...+.+...++|.++|++++++++.|||. +. |.+.+|+++|...+...+...+.
T Consensus 709 ~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~ 787 (1228)
T KOG0055|consen 709 WALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLS 787 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999996 56 99999999999999999999898
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhchhHhHHHHhhcchHHHHhc
Q 000511 1015 ILLANFVGLLGIAVVLSYVQVFFL---LLLVPFWFIYSKLQFFYRS-TSRELRRLDSVSRSPIYASFTETLNGSSTIRAF 1090 (1455)
Q Consensus 1015 ~~~~~~~~~l~~~~~~~~~~~~~~---l~~~p~~~~~~~i~~~y~~-~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf 1090 (1455)
.++.++..++..+++.++..|-++ +++.|++++..+.+..+.. ..++.+... ........|++.+++||++|
T Consensus 788 ~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~----~ea~~iA~eai~NIrTV~al 863 (1228)
T KOG0055|consen 788 LVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAY----EEASKIAIEAVSNIRTVAAL 863 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH----HHHHHHHHHHHHhHHHHHHH
Confidence 888888888877777777777654 4566777766666655443 333333211 12234578999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHH
Q 000511 1091 KSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVS 1170 (1455)
Q Consensus 1091 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~ 1170 (1455)
+.|++|.+.|.+.++...+..... ..|.++...+-.+++.+.-++...++.. -...+.+++..+...+.-+..-..
T Consensus 864 ~~e~~~~~~y~~~l~~p~~~~~~~---~~i~gl~f~~sqs~~~~~~A~~f~~G~~-Li~~g~~~~~~~~~vf~~l~~ta~ 939 (1228)
T KOG0055|consen 864 CAEEKFMELYKEELEKPRKSSFKR---GLISGLGFGFSQSLLFFVYALSFWYGAR-LISNGEMTFEDVFRVFMALSFTAM 939 (1228)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhHH-HHhcCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999888877766544 3344444333333322222222221111 111344556555554444444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCC-CCcceeeeeEEEeCCcEE
Q 000511 1171 LLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQV 1249 (1455)
Q Consensus 1171 ~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~Gekv 1249 (1455)
.+.......++..++..|+.+++++++.+++-...........+.+|.|+|+||+|+||.. ..+||+|+||+|++||.+
T Consensus 940 ~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTv 1019 (1228)
T KOG0055|consen 940 ALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTV 1019 (1228)
T ss_pred HHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEE
Confidence 6677888889999999999999999988774321111111122468999999999999733 236999999999999999
Q ss_pred EEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCC-CCChHHHHHH
Q 000511 1250 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSV 1328 (1455)
Q Consensus 1250 gIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~-~~~d~ei~~a 1328 (1455)
|+||||||||||++.+|.|+|+|++|.|.|||.||+++++++||++|++|+|||.||++||||||.++. ..+.+||.+|
T Consensus 1020 ALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~A 1099 (1228)
T KOG0055|consen 1020 ALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEA 1099 (1228)
T ss_pred EEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999983 4689999999
Q ss_pred HHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEE
Q 000511 1329 LEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVI 1406 (1455)
Q Consensus 1329 L~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI 1406 (1455)
++.++.++||.++ ||||.|||+|.+||||||||||||||++|||||||||||||+||.++|+.+|++|++...+||+|
T Consensus 1100 ak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~I 1179 (1228)
T KOG0055|consen 1100 AKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTI 1179 (1228)
T ss_pred HHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEE
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhhC
Q 000511 1407 TIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1454 (1455)
Q Consensus 1407 ~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~g 1454 (1455)
+|||||+||++||.|+|+++|+|+|.|+|++|++ ++|.|++|++.+.
T Consensus 1180 vIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1180 VIAHRLSTIQNADVIAVLKNGKVVEQGTHDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred EEecchhhhhcCCEEEEEECCEEEecccHHHHHh-CCCchHHHhhhcc
Confidence 9999999999999999999999999999999999 5689999998754
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.5e-134 Score=1366.85 Aligned_cols=1163 Identities=17% Similarity=0.210 Sum_probs=848.6
Q ss_pred hHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 265 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1455)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 344 (1455)
+++-.-+.+++.++...++.++..++....|+++.++++.+..... ...+++.++++.++..++...+.+...+++.
T Consensus 50 ~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (1466)
T PTZ00265 50 PFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN---VNDIIFSLVLIGIFQFILSFISSFCMDVVTT 126 (1466)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444556667777788888888888899999999987642211 1123334445556666677777888889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHH
Q 000511 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY-LLYTQVKFAFVSGLA 422 (1455)
Q Consensus 345 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~-lL~~~lg~a~l~g~~ 422 (1455)
++...+...+|+|.++++...++..+.|++.+.++.|++.+...+. .+..+...++.++.++. +++....++. +.++
T Consensus 127 ~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lal-v~l~ 205 (1466)
T PTZ00265 127 KILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTL-CITC 205 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHH
Confidence 9999999999999999999888888889999999999999887543 34455555554444332 3333333332 2233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 423 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 502 (1455)
Q Consensus 423 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 502 (1455)
++.+++.+..++.+++.+..++..+..++..+.+.|.++||++||.|+.|+.+.+++.+..++..+...+.....++...
T Consensus 206 ~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~ 285 (1466)
T PTZ00265 206 VFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIG 285 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445667788888888888888899999999999999999999999999998887655544444444444444322
Q ss_pred HHHHH--HHHHHHHHHHHHHHhCC--------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 000511 503 FWATT--PTLFSLFTFGLFALMGH--------QLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCS 572 (1455)
Q Consensus 503 ~~~~~--~~~~~~~~f~~~~~~~~--------~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~ 572 (1455)
+.... ...+.++++|.+.+..+ .++++.+++.+........++..+...+..+..+.+|.+||.+.++.+
T Consensus 286 ~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~ 365 (1466)
T PTZ00265 286 MINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRK 365 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22222 22345567888877653 588898888765555545566666667889999999999999999765
Q ss_pred CCchhhhhhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHH
Q 000511 573 EYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNS 652 (1455)
Q Consensus 573 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~ 652 (1455)
+..+.... ... .+ ....|+++|++|+|+.+++ .++|+|+||+|++||+++|+||||||||||+++
T Consensus 366 ~~~~~~~~--~~~---------~~-~~~~I~~~nVsf~Y~~~~~---~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~l 430 (1466)
T PTZ00265 366 PLVENNDD--GKK---------LK-DIKKIQFKNVRFHYDTRKD---VEIYKDLNFTLTEGKTYAFVGESGCGKSTILKL 430 (1466)
T ss_pred CCCCCCCC--Ccc---------CC-CCCcEEEEEEEEEcCCCCC---CceeccceEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 42211000 000 01 1136999999999975422 246999999999999999999999999999999
Q ss_pred HhcCccCCCcEEEEc-C-------------cEEEEcCCCCCCCcCHHHHhccCCC-------------------------
Q 000511 653 ILGEMMLTHGSIHAS-G-------------SIAYVPQVPWILSGTIRDNILFGKN------------------------- 693 (1455)
Q Consensus 653 l~g~~~~~~G~i~~~-~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~------------------------- 693 (1455)
|+|.++|++|+|.++ | .||||+|+|.+|++||+|||.+|..
T Consensus 431 L~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (1466)
T PTZ00265 431 IERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNK 510 (1466)
T ss_pred HHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccc
Confidence 999999999999994 3 4899999999999999999998741
Q ss_pred ---------------------------------CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHH
Q 000511 694 ---------------------------------YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 740 (1455)
Q Consensus 694 ---------------------------------~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRval 740 (1455)
.++++..++++.+++++.+..+|+|++|.+|++|.+|||||||||+|
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaI 590 (1466)
T PTZ00265 511 RNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISI 590 (1466)
T ss_pred cccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHH
Confidence 23456778888889999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccccCCEEEEEeCC--------------
Q 000511 741 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKG-------------- 805 (1455)
Q Consensus 741 ARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G-------------- 805 (1455)
|||++++|+|||||||||+||+++++.+.+. +.... .+++|+|+|||+++.+..||+|++|++|
T Consensus 591 ARAll~~P~ILlLDEpTSaLD~~se~~i~~~-L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~ 669 (1466)
T PTZ00265 591 ARAIIRNPKILILDEATSSLDNKSEYLVQKT-INNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGED 669 (1466)
T ss_pred HHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccc
Confidence 9999999999999999999999999988776 43311 2478999999999999999999999886
Q ss_pred ---------------------------------eEEEecCHHHHHh-ccccCcccccccchhhhhh-----hhhh--ccc
Q 000511 806 ---------------------------------QVKWIGSSADLAV-SLYSGFWSTNEFDTSLHMQ-----KQEM--RTN 844 (1455)
Q Consensus 806 ---------------------------------~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~-----~~~~--~~~ 844 (1455)
+|+|+|+|+|+++ ..+.+..+........... .... ...
T Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~ 749 (1466)
T PTZ00265 670 PTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSS 749 (1466)
T ss_pred ccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccc
Confidence 5999999999987 4555444332111000000 0000 000
Q ss_pred c-c-ch-h---hhhhh---hccc------ccCCCcch-hhHHHH------HHH--hcCcc--hhHHHHHHhhhhhHHHHH
Q 000511 845 A-S-SA-N---KQILL---QEKD------VVSVSDDA-QEIIEV------EQR--KEGRV--ELTVYKNYAKFSGWFITL 898 (1455)
Q Consensus 845 ~-~-~~-~---~~~~~---~~~~------~~~~~~~~-~~~~~~------e~~--~~g~v--~~~~y~~y~~~~g~~~~~ 898 (1455)
. . .. . ..... .+.. .....++. .+...+ ++. ..... .+..+..+++...+. ++
T Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 828 (1466)
T PTZ00265 750 AYKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKD-VT 828 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHH-HH
Confidence 0 0 00 0 00000 0000 00000000 000000 000 00001 111222233222222 22
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcccCC-CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 899 VICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTK 977 (1455)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~ 977 (1455)
+.++++++..++....++.++.+++.... .........|.+++++++++..++.+++.++..+.+.+...+++.+++++
T Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ 908 (1466)
T PTZ00265 829 IIALSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFEN 908 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233444444555555566666542211 00111234677777888888888899999999999999999999999999
Q ss_pred HhcCccccccc--CChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 978 IVNAPVLFFDQ--TPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFY 1055 (1455)
Q Consensus 978 vl~~p~~ff~~--~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y 1055 (1455)
++++|++|||+ +++|++++|+++|++.+...+...+..++..++.+++.++++++..|.++++++|+.++........
T Consensus 909 ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~ 988 (1466)
T PTZ00265 909 ILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIR 988 (1466)
T ss_pred HHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999996 8899999999999999999888888888888888888888888888877766655544332221111
Q ss_pred HH--HHHHHHHH-------------HHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1056 RS--TSRELRRL-------------DSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLW 1120 (1455)
Q Consensus 1056 ~~--~sr~l~~l-------------~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w 1120 (1455)
.+ ..++.++. +.+..+.....+.|++.|++|||+|+.|+++.++|.+..+...+..........+
T Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1466)
T PTZ00265 989 ARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSM 1068 (1466)
T ss_pred HHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11111111 2223445677899999999999999999999999999998887766655444333
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 000511 1121 LSLRLQLLAAFIISFIATM-AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVP 1199 (1455)
Q Consensus 1121 l~~~l~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~ 1199 (1455)
+....+.+..+...++.++ ..+. ..+..+.|.+..++.+.+.....+..+...+.+++.+..+.+|+.++++.+
T Consensus 1069 ~~~~~~~~~~~~~~~~~~~G~~lv-----~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~ 1143 (1466)
T PTZ00265 1069 LWGFSQSAQLFINSFAYWFGSFLI-----RRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRK 1143 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3333333322211111111 1111 123456776655555544444556778888999999999999999999876
Q ss_pred ccccccC-CCCC--CCCCCCccEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC---
Q 000511 1200 QEELCGY-QSLS--PDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--- 1272 (1455)
Q Consensus 1200 ~e~~~~~-~~~~--~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~--- 1272 (1455)
++..... .... ...+.+|.|+|+||+|+|++. ..+||+|+||+|+|||++||||+||||||||+++|+|+|+|
T Consensus 1144 ~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~ 1223 (1466)
T PTZ00265 1144 SNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKND 1223 (1466)
T ss_pred CcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccc
Confidence 5421111 1111 112346889999999999743 24799999999999999999999999999999999999999
Q ss_pred ---------------------------------------------------CCceEEECCEeCCCCChHHHhcccEEEeC
Q 000511 1273 ---------------------------------------------------CGGQILVDGLNIINTPVRDLRGRFAVVPQ 1301 (1455)
Q Consensus 1273 ---------------------------------------------------~~G~I~IdG~di~~i~~~~lR~~i~~VpQ 1301 (1455)
++|+|+|||+||++++++++|++|+||||
T Consensus 1224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Q 1303 (1466)
T PTZ00265 1224 HHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQ 1303 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCC
Confidence 69999999999999999999999999999
Q ss_pred CCCCCCCcHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000511 1302 SPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1455)
Q Consensus 1302 dp~lf~gTIreNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLD 1378 (1455)
||+||+|||||||.++. ..+|+|+++|++.++++++|.++ ||||.|||+|.+|||||||||||||||+|+|+|||||
T Consensus 1304 ep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1304 EPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred CCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999885 47999999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhhCEEEEEeC----CeE-EEeCChhHHhccCCcHHHHHHH
Q 000511 1379 ECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDH----GHL-VEQGNPQTLLQDECSVFSSFVR 1451 (1455)
Q Consensus 1379 EaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~----G~i-ve~G~p~eLl~~~~s~f~~l~~ 1451 (1455)
||||+||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |++ +|.|+|+||+++++|.|++|++
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~ 1463 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVK 1463 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHh
Confidence 9999999999999999999873 69999999999999999999999999 995 4999999999865689999998
Q ss_pred hh
Q 000511 1452 AS 1453 (1455)
Q Consensus 1452 ~~ 1453 (1455)
.+
T Consensus 1464 ~~ 1465 (1466)
T PTZ00265 1464 LA 1465 (1466)
T ss_pred hc
Confidence 65
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3e-89 Score=819.31 Aligned_cols=562 Identities=26% Similarity=0.363 Sum_probs=457.5
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCC-CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 882 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFA 960 (1455)
Q Consensus 882 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 960 (1455)
+...+.|.+.-.+++...++ +.++......+.+.++...+|.... ............+..++.++.+++..++.+++.
T Consensus 135 ~~rl~~l~~~~~~~l~~a~~-~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~ 213 (716)
T KOG0058|consen 135 LKRLLGLLKPEWKWLVAAFV-LLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQ 213 (716)
T ss_pred HHHHHHHhchhHHHHHHHHH-HHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555544444433332 2233333344445555444332211 111222333455667777888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 000511 961 FGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLL 1040 (1455)
Q Consensus 961 ~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~ 1040 (1455)
+.+.+...++|..+|++++++.++|||.+.+|++++|++.|...+.+.++..+...+.+.+..++.+..+++.+|.+.++
T Consensus 214 ~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv 293 (716)
T KOG0058|consen 214 YAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLV 293 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998876543
Q ss_pred ---HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1041 ---LVPFW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1116 (1455)
Q Consensus 1041 ---~~p~~-~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~ 1116 (1455)
.+|++ ++...+.++|++.+++.+ ++-+.......|.+.+++|||+|+.|+...++|.+.+++..+...+...
T Consensus 294 ~~i~~P~v~~~~~~yG~~~rklS~~~Q----~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~ 369 (716)
T KOG0058|consen 294 TLIVVPIVALVAKIYGKYLRKLSKQTQ----DALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAV 369 (716)
T ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333 334445556666666554 4445556778999999999999999999999999988887665544333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000511 1117 ASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1196 (1455)
Q Consensus 1117 ~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~ 1196 (1455)
..-.+....++........+ ..++.+ ....+.+++|.+...+.|...+...+.++...|.++.+..+|.+|++|++
T Consensus 370 a~~~f~~~~~~~~~~~~~si---L~~Gg~-Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~ 445 (716)
T KOG0058|consen 370 AYGIFFGSTNLLGNLAVLSI---LFYGGH-LVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELM 445 (716)
T ss_pred HhhHhHhHHHHHHhHHHHHH---HHhccc-hhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHh
Confidence 32222222333333221111 111111 12246788999999999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCCccEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCc
Q 000511 1197 DVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1275 (1455)
Q Consensus 1197 ~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G 1275 (1455)
|.+|.-... ....|. +.+|.|+|+||+|+|+.. ..+||||+||+|+|||.||+||||||||||++++|+|+|+|++|
T Consensus 446 dr~P~i~~~-G~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG 523 (716)
T KOG0058|consen 446 DRKPRIPLT-GTLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSG 523 (716)
T ss_pred ccCCCCCCC-Cccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 987754222 111222 568999999999999754 23699999999999999999999999999999999999999999
Q ss_pred eEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCC
Q 000511 1276 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1352 (1455)
Q Consensus 1276 ~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~ 1352 (1455)
+|++||+||++++.++||++||+|.|||+||+|||||||.++.+ .+||||.+|.++++.++||.++ |+||.|||+|.
T Consensus 524 ~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 524 RILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGS 603 (716)
T ss_pred eEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccc
Confidence 99999999999999999999999999999999999999988754 5899999999999999999999 99999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEe
Q 000511 1353 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1432 (1455)
Q Consensus 1353 ~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1432 (1455)
.|||||||||||||||+|||+|||||||||+||.++|..+|++|.+..+++|||+|||||+||+.+|+|+|+|+|+|+|.
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~ 683 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEM 683 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHhccCCcHHHHHHHhhC
Q 000511 1433 GNPQTLLQDECSVFSSFVRAST 1454 (1455)
Q Consensus 1433 G~p~eLl~~~~s~f~~l~~~~g 1454 (1455)
|+|+||+++++|.|++|++++.
T Consensus 684 G~h~eLl~~~~gly~~Lv~~q~ 705 (716)
T KOG0058|consen 684 GTHDELLSKPNGLYAKLVQRQL 705 (716)
T ss_pred ccHHHHhhCcccHHHHHHHHhc
Confidence 9999999999999999998753
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4.1e-81 Score=784.33 Aligned_cols=547 Identities=27% Similarity=0.393 Sum_probs=463.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000511 900 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 979 (1455)
Q Consensus 900 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl 979 (1455)
+++..++.+......+++....+|..-.............++++.+++..++.+++.+++...+.|....+-.+++++++
T Consensus 159 v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hll 238 (709)
T COG2274 159 VLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHLL 238 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 33455566666777777777776654222222333334455667778888999999999999999999999999999999
Q ss_pred cCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 980 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTS 1059 (1455)
Q Consensus 980 ~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~s 1059 (1455)
+.|++||+++++|++++|+ +|++.|.+.+...+...+..+...+..++++.+.+|.++++.+..++++..+.....+..
T Consensus 239 ~Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l 317 (709)
T COG2274 239 RLPLSYFEKRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLL 317 (709)
T ss_pred cCcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 578888888888877777777777777777777777766554444444433333333333
Q ss_pred HHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1060 RELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATM 1139 (1455)
Q Consensus 1060 r~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 1139 (1455)
|+..+...+..+...++..|++.|++|||+.+.|.++..++++..++..+..+.......|.+....++..+....+.++
T Consensus 318 ~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~iL~~ 397 (709)
T COG2274 318 RRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLILWF 397 (709)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444555667789999999999999999999999999999999999999988888888777666655433222222
Q ss_pred HHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccE
Q 000511 1140 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLI 1219 (1455)
Q Consensus 1140 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I 1219 (1455)
.+... ..+..+.|.+..+......+.+++..++..|++++....+.+|+.+.++.|+|+..+.. +...|+.+|.|
T Consensus 398 G~~lV----l~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~-~~~~~~~~g~I 472 (709)
T COG2274 398 GAILV----LEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT-LIHLPKLQGEI 472 (709)
T ss_pred HHHHH----hcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-cccccccCceE
Confidence 21110 13467889998888999999999999999999999999999999999999998644322 34456778999
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000511 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1455)
Q Consensus 1220 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~V 1299 (1455)
+|+||+|+|+++.+++|+|+||+|+|||+|||||+||||||||+++|.|+|+|++|+|++||+|+++++++.+|++|+||
T Consensus 473 ~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V 552 (709)
T COG2274 473 EFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYV 552 (709)
T ss_pred EEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEE
Confidence 99999999999888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCcHHHhcCcCCCC-ChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000511 1300 PQSPFLFEGSLRDNLDPFHMN-DDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1376 (1455)
Q Consensus 1300 pQdp~lf~gTIreNLdp~~~~-~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILl 1376 (1455)
|||++||+||||||+..+++. +|||+++|++.+|.+++|.++ ||||.++|+|.||||||||||+||||++++|+|||
T Consensus 553 ~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILl 632 (709)
T COG2274 553 LQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILL 632 (709)
T ss_pred cccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEE
Confidence 999999999999999988765 679999999999999999999 99999999999999999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhh
Q 000511 1377 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1377 LDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
|||||||||++||+.|++.|.+..++||+|+||||++++++||||+|||+|+|+|.|+|+||++. +|.|+++++.+
T Consensus 633 LDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~~q 708 (709)
T COG2274 633 LDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred EeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999997 67999999865
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.3e-77 Score=759.68 Aligned_cols=541 Identities=26% Similarity=0.395 Sum_probs=440.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000511 903 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 982 (1455)
Q Consensus 903 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p 982 (1455)
..++........++++....+... ........+...++++.++..++.++..+...+.+.+...+++.++++++++.|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~ 99 (567)
T COG1132 22 LLLLSALLSLLLPLLIGRIIDALL--ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLRLP 99 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 334444555555555554444321 011122334444555555666677777777777789999999999999999999
Q ss_pred ccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 983 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1062 (1455)
Q Consensus 983 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l 1062 (1455)
+++|++++.|++++|+++|++.++..+......+...++.+++.++++...+|.+.++++....++......+.+..+..
T Consensus 100 ~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~ 179 (567)
T COG1132 100 LSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSRKL 179 (567)
T ss_pred HHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988877755555567777777777777777766655554444444444455455666
Q ss_pred HHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1063 RRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVI 1142 (1455)
Q Consensus 1063 ~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~ 1142 (1455)
.+....+.+.+.+.+.|+++|+++||+|+.++...+++.+..+...+...........+.....++..+....+......
T Consensus 180 ~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (567)
T COG1132 180 SRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALGGF 259 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777778899999999999999999999999988888887777766654444444433333333333222221111111
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEE
Q 000511 1143 GSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQ 1222 (1455)
Q Consensus 1143 ~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~ 1222 (1455)
.. ..+..+.|.+...+.+...+..++..+...+..++....+.+|+.++.+.+++....... .++..|.|+|+
T Consensus 260 ~~----~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~---~~~~~~~I~f~ 332 (567)
T COG1132 260 LV----LSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP---LKDTIGSIEFE 332 (567)
T ss_pred HH----HcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---CCCCCCeEEEE
Confidence 10 123367888999999999999999999999999999999999999999986653221111 34556889999
Q ss_pred EEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCC
Q 000511 1223 NVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQS 1302 (1455)
Q Consensus 1223 nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQd 1302 (1455)
||+|+|++ .+++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|.|||+||++++.+++|++|++||||
T Consensus 333 ~vsf~y~~-~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd 411 (567)
T COG1132 333 NVSFSYPG-KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQD 411 (567)
T ss_pred EEEEEcCC-CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEccc
Confidence 99999975 35799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000511 1303 PFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1379 (1455)
Q Consensus 1303 p~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDE 1379 (1455)
|+||+|||||||+++++ .+|||+++|++.++++|+++++ |+||.+||+|.+||||||||+|||||++|+|+||||||
T Consensus 412 ~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILDE 491 (567)
T COG1132 412 PLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDE 491 (567)
T ss_pred ceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 99999999999999987 6999999999999999999999 99999999999999999999999999999999999999
Q ss_pred cCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhhC
Q 000511 1380 CTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1454 (1455)
Q Consensus 1380 aTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~g 1454 (1455)
|||+||++||+.|++.+++..+++|+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.|++||+.++
T Consensus 492 aTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~~ 565 (567)
T COG1132 492 ATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQG 565 (567)
T ss_pred cccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHhh
Confidence 99999999999999999988889999999999999999999999999999999999999997 679999999865
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.9e-76 Score=753.85 Aligned_cols=563 Identities=19% Similarity=0.246 Sum_probs=437.7
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCC-CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 885 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 963 (1455)
Q Consensus 885 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 963 (1455)
++.|.+...+..+. .+++.++...+....++.+.+..+.... .........++.+++++.++..++.+++.+.....+
T Consensus 13 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (588)
T PRK11174 13 LKQQSKPAKRWLNL-SILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAG 91 (588)
T ss_pred HHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455543333222 2234444555555556666655543110 011111223444555566667777888888888899
Q ss_pred HHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 000511 964 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1043 (1455)
Q Consensus 964 ~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p 1043 (1455)
.+...+++.++++++++.|.++|++.++|++++|+++|++.+++.+...+..++..++.+++.++++.+.+|.+.++++.
T Consensus 92 ~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 171 (588)
T PRK11174 92 QHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLG 171 (588)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888878887777777777777777778776554444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1044 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1123 (1455)
Q Consensus 1044 ~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 1123 (1455)
..++...+...+.+..++..+...+..+.+.+.+.|.++|+++||+|++|+.+.+++.+..++..+..........+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (588)
T PRK11174 172 TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSA 251 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444445455555555566777889999999999999999999999999999888887776655554444444
Q ss_pred HHHHHHHHHHHHHH-HHHHHhhcCCCCCCc----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 000511 1124 RLQLLAAFIISFIA-TMAVIGSRGNLPATF----STPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1198 (1455)
Q Consensus 1124 ~l~~~~~~~~~~~~-~~~v~~~~~~~~~~~----~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~ 1198 (1455)
...++..+.+.++. ...... .+....+. .+.....+++.++..+..++..+...+.++.....+.+|+.++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 330 (588)
T PRK11174 252 VLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLET 330 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44433332221111 111111 11111111 1222333444566677888999999999999999999999999987
Q ss_pred CccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEE
Q 000511 1199 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1278 (1455)
Q Consensus 1199 ~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~ 1278 (1455)
++++...... +.+.+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||+++|+|+| |++|+|.
T Consensus 331 ~~~~~~~~~~-~~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~ 407 (588)
T PRK11174 331 PLAHPQQGEK-ELASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLK 407 (588)
T ss_pred CCcccCCCcc-ccCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEE
Confidence 6643211111 1111234679999999887654 57999999999999999999999999999999999999 9999999
Q ss_pred ECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCC
Q 000511 1279 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFS 1355 (1455)
Q Consensus 1279 IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LS 1355 (1455)
+||+|+++++.+++|++|+||||||++|+|||||||.+++ ..+|+|+++|++.|+++++++++ |+||.+||+|.+||
T Consensus 408 i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LS 487 (588)
T PRK11174 408 INGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLS 487 (588)
T ss_pred ECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCC
Confidence 9999999999999999999999999999999999999885 47999999999999999999999 99999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCCh
Q 000511 1356 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1356 gGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p 1435 (1455)
|||||||+||||++++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|
T Consensus 488 GGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G~~ 567 (588)
T PRK11174 488 VGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQGDY 567 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecCCH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred hHHhccCCcHHHHHHHhh
Q 000511 1436 QTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1436 ~eLl~~~~s~f~~l~~~~ 1453 (1455)
+||++++ +.|++|++.+
T Consensus 568 ~eL~~~~-~~y~~l~~~q 584 (588)
T PRK11174 568 AELSQAG-GLFATLLAHR 584 (588)
T ss_pred HHHHhcc-hHHHHHHHHh
Confidence 9999865 6999999865
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.5e-76 Score=761.41 Aligned_cols=539 Identities=26% Similarity=0.373 Sum_probs=438.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000511 900 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 979 (1455)
Q Consensus 900 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl 979 (1455)
.+++.++........+++.+..+|..............+.+++++.++..++.+++.+.+.+.+.+...+++++++++++
T Consensus 166 ~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll 245 (711)
T TIGR00958 166 AFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLRIREDLFRSLL 245 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555566666677776666543211111112223444555566677777888888899999999999999999999
Q ss_pred cCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 980 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTS 1059 (1455)
Q Consensus 980 ~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~s 1059 (1455)
+.|++||+++++|+++||+++|++.+++.+...+..++..++.+++.++++.+.+|.+.++++....+...+.+.+.+..
T Consensus 246 ~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~~~~ 325 (711)
T TIGR00958 246 RQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKVFGKRY 325 (711)
T ss_pred cCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888888888888888888888888776655444444444455555555
Q ss_pred HHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Q 000511 1060 RELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS---LWLSLRLQLLAAFIISFI 1136 (1455)
Q Consensus 1060 r~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~wl~~~l~~~~~~~~~~~ 1136 (1455)
++..+...+..+...+++.|+++|+++||+|++|+++.+++.+..++..+......... .|....+..+..+++..+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 405 (711)
T TIGR00958 326 QLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQVLVLYY 405 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55544455566677899999999999999999999999999999888777655443322 232222222222222222
Q ss_pred HHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCC
Q 000511 1137 ATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQ 1216 (1455)
Q Consensus 1137 ~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~ 1216 (1455)
+...+. .+.++.|.+..++.|...+..++..+...+.++.++..+.+|+.++++.+++...... ...++.+
T Consensus 406 g~~lv~-------~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~ 476 (711)
T TIGR00958 406 GGQLVL-------TGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGT--LAPLNLE 476 (711)
T ss_pred HHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CCCCCCC
Confidence 111121 3456788888899999999999999999999999999999999999987665422111 1223557
Q ss_pred ccEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcc
Q 000511 1217 GLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1295 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~ 1295 (1455)
|.|+|+||+|+|+++ .+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++
T Consensus 477 ~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~ 556 (711)
T TIGR00958 477 GLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQ 556 (711)
T ss_pred CeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhh
Confidence 889999999999753 3579999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeCCCCCCCCcHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1296 FAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1296 i~~VpQdp~lf~gTIreNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
|+||||||++|+|||||||.++. ..+|+++++++++++++++++++ |+||.+||+|.+||||||||++||||++++|
T Consensus 557 i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~p 636 (711)
T TIGR00958 557 VALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRKP 636 (711)
T ss_pred ceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999874 46889999999999999999999 9999999999999999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHH
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1450 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~ 1450 (1455)
+|||||||||+||++||+.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+||++++ +.|++|+
T Consensus 637 ~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~-~~y~~lv 711 (711)
T TIGR00958 637 RVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQ-GCYKHLV 711 (711)
T ss_pred CEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCC-CchHhcC
Confidence 9999999999999999999999 3445799999999999999999999999999999999999999875 6898874
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.1e-75 Score=757.06 Aligned_cols=541 Identities=21% Similarity=0.245 Sum_probs=439.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000511 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 981 (1455)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 981 (1455)
+..++........++.+....|..-..........++.+++++.++..++.+++.+.....+.+...+++..+++++++.
T Consensus 143 ~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~ 222 (686)
T TIGR03797 143 AMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRLLRL 222 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34444455555556666555553211111111223344555666677788888899999999999999999999999999
Q ss_pred cccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 982 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1061 (1455)
Q Consensus 982 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~ 1061 (1455)
|++||++.++|++++|++ |++.+.+.+...+...+..+...++.++++++.+|+++++++.+.+++..+.....+..+.
T Consensus 223 ~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~ 301 (686)
T TIGR03797 223 PVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLLQVR 301 (686)
T ss_pred CHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 7888888877766666666666666666677777776655444433333333333333333
Q ss_pred HHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1062 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1141 (1455)
Q Consensus 1062 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1141 (1455)
..+...+..+...+++.|+++|+.+||+|+.|+++.+++.+..++..+..+.....+.|.......+..+...++.++..
T Consensus 302 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~ 381 (686)
T TIGR03797 302 KERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFAAAI 381 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334445567789999999999999999999999999999999998888887777777666555544332222211111
Q ss_pred HhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEE
Q 000511 1142 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1221 (1455)
Q Consensus 1142 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1221 (1455)
... ..+.++.|.+..+..+...+..++..+...+.++.....+.+|+.++++.++|...... ...+..|.|+|
T Consensus 382 ~lv----~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~---~~~~~~~~I~~ 454 (686)
T TIGR03797 382 SLL----GGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAKT---DPGKLSGAIEV 454 (686)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcC---CCCCCCceEEE
Confidence 100 13456788888888888999999999999999999999999999999987766422111 11234578999
Q ss_pred EEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000511 1222 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1301 (1455)
Q Consensus 1222 ~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQ 1301 (1455)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|+++++|||
T Consensus 455 ~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q 534 (686)
T TIGR03797 455 DRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQ 534 (686)
T ss_pred EEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEcc
Confidence 99999998666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000511 1302 SPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1379 (1455)
Q Consensus 1302 dp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDE 1379 (1455)
||++|+|||||||.++++.+|++++++++.++++++++++ |+||.+||+|.+||||||||++||||++++|+||||||
T Consensus 535 ~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDE 614 (686)
T TIGR03797 535 NGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDE 614 (686)
T ss_pred CCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 9999999999999988778999999999999999999998 99999999999999999999999999999999999999
Q ss_pred cCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhh
Q 000511 1380 CTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1380 aTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
|||+||++||+.+++.|++. ++|+|+||||+++++.||||+|||+|+|+|.|+|+||+++ +|.|++|++.+
T Consensus 615 pTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y~~l~~~q 685 (686)
T TIGR03797 615 ATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLFAQLARRQ 685 (686)
T ss_pred CccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHHHHHHHhc
Confidence 99999999999999999886 6899999999999999999999999999999999999986 57999998753
No 15
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.5e-75 Score=756.68 Aligned_cols=540 Identities=22% Similarity=0.308 Sum_probs=442.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000511 903 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 982 (1455)
Q Consensus 903 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p 982 (1455)
..++..+.....+++++...|.............++.+++++.++..++.+++.++....+.+...+++.++++++++.|
T Consensus 162 ~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~ 241 (710)
T TIGR03796 162 AGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRLP 241 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33444455555566666655532111111112234445555666777888889999999999999999999999999999
Q ss_pred ccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 983 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1062 (1455)
Q Consensus 983 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l 1062 (1455)
++||++.++|++++|++.| +.+.+.+...+..++..++.+++.++++++.+|+++++++..++++..+...+.+..+..
T Consensus 242 ~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~ 320 (710)
T TIGR03796 242 VRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVDA 320 (710)
T ss_pred HHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 568777777777777777777777778888888777665555555555555555544555
Q ss_pred HHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1063 RRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVI 1142 (1455)
Q Consensus 1063 ~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~ 1142 (1455)
.+......+...+++.|+++|+.+||++|+|+.+.+++.+..+...+..+.......|.......+..+...++.++...
T Consensus 321 ~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~ 400 (710)
T TIGR03796 321 NRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGL 400 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666778899999999999999999999999999988888887777666666666555555444322221111111
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccC----C-CCCCCCCCCc
Q 000511 1143 GSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGY----Q-SLSPDWPFQG 1217 (1455)
Q Consensus 1143 ~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~----~-~~~~~wp~~g 1217 (1455)
. ...+..+.|.+..+..+...+..++..+...+.++.....+.+|+.++++.++|..... . ...+.++.+|
T Consensus 401 ~----v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~ 476 (710)
T TIGR03796 401 R----VMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSG 476 (710)
T ss_pred H----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCC
Confidence 0 01345678888888999999999999999999999999999999999998877653221 0 0111134568
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++++
T Consensus 477 ~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~ 556 (710)
T TIGR03796 477 YVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVA 556 (710)
T ss_pred eEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhhee
Confidence 99999999999876678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCCcHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1298 VVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1298 ~VpQdp~lf~gTIreNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
||||||++|+|||||||.+++ ..+|++++++++.++++++++++ |+||.++|+|.+|||||||||+||||++++|+|
T Consensus 557 ~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~i 636 (710)
T TIGR03796 557 MVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSI 636 (710)
T ss_pred EEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCE
Confidence 999999999999999998875 47899999999999999999999 999999999999999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHH
Q 000511 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1450 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~ 1450 (1455)
||||||||+||++||+.|.+.|++ .++|+|+||||++++..||||+|||+|+|+|.|+|+||+++ ++.|++|+
T Consensus 637 liLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 637 LILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred EEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHHHc-CCcHHHHh
Confidence 999999999999999999999987 58999999999999999999999999999999999999986 46899987
No 16
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.3e-74 Score=752.11 Aligned_cols=557 Identities=25% Similarity=0.338 Sum_probs=441.5
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 882 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 961 (1455)
Q Consensus 882 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 961 (1455)
+..+..|++...+.. ...++..++..+.....+++++.+.|.............+..+++++.++..++.+++.++..+
T Consensus 144 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (708)
T TIGR01193 144 LLKFIPLITRQKKLI-VNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNV 222 (708)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444554333222 2233444555566666777887777643211111112223334455556677788888888999
Q ss_pred HHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 000511 962 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1041 (1455)
Q Consensus 962 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 1041 (1455)
.+.+...+++.++++++++.|+.||++.++|++++|++ |.+.+.+.+...+...+..++.+++.++++.+.+|++++++
T Consensus 223 ~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 301 (708)
T TIGR01193 223 LGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLS 301 (708)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999998 88887776665555555555555666666666777665554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1042 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1121 (1455)
Q Consensus 1042 ~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl 1121 (1455)
+..++++..+...+.+..++..+......+...+++.|+++|+.|||+||.|+.+.+++.+..+...+..+.......+.
T Consensus 302 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (708)
T TIGR01193 302 LLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQ 381 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444455555555556666778899999999999999999999999999988887777766554444433
Q ss_pred HHHHHHHHH---HHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 000511 1122 SLRLQLLAA---FIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1198 (1455)
Q Consensus 1122 ~~~l~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~ 1198 (1455)
.....++.. +++..++...+. .+..+.|.+..+..+...+..++..+...+.+++....+++|+.++++.
T Consensus 382 ~~~~~~~~~~~~i~il~~g~~lv~-------~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 454 (708)
T TIGR01193 382 QAIKAVTKLILNVVILWTGAYLVM-------RGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLV 454 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333222222 222222222221 3456788888889999999999999999999999999999999999988
Q ss_pred CccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEE
Q 000511 1199 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1278 (1455)
Q Consensus 1199 ~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~ 1278 (1455)
++|...... ..+.++..|.|+|+||+|+|++ .+++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|+
T Consensus 455 ~~e~~~~~~-~~~~~~~~~~I~~~~vsf~y~~-~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~ 532 (708)
T TIGR01193 455 DSEFINKKK-RTELNNLNGDIVINDVSYSYGY-GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEIL 532 (708)
T ss_pred CCccccccc-ccCCCCCCCcEEEEEEEEEcCC-CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEE
Confidence 776532211 1223455789999999999974 35799999999999999999999999999999999999999999999
Q ss_pred ECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcC--CCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCC
Q 000511 1279 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF--HMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISF 1354 (1455)
Q Consensus 1279 IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~--~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~L 1354 (1455)
+||+|+++++++++|++++||||||++|+|||||||.++ ...+|++++++++.++++++++++ ||||.++|+|.+|
T Consensus 533 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~L 612 (708)
T TIGR01193 533 LNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSI 612 (708)
T ss_pred ECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCC
Confidence 999999999999999999999999999999999999987 346899999999999999999998 9999999999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCC
Q 000511 1355 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGN 1434 (1455)
Q Consensus 1355 SgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~ 1434 (1455)
|||||||++||||++++|+|||||||||+||++||+.+++.|++. +++|+|+||||++++..||+|+||++|+++|.|+
T Consensus 613 SgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~ 691 (708)
T TIGR01193 613 SGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGS 691 (708)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECC
Confidence 999999999999999999999999999999999999999999874 7899999999999999999999999999999999
Q ss_pred hhHHhccCCcHHHHHHH
Q 000511 1435 PQTLLQDECSVFSSFVR 1451 (1455)
Q Consensus 1435 p~eLl~~~~s~f~~l~~ 1451 (1455)
|+||+++ +|.|++|++
T Consensus 692 ~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 692 HDELLDR-NGFYASLIH 707 (708)
T ss_pred HHHHHhc-CCcHHHHhh
Confidence 9999986 479999986
No 17
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=5.3e-74 Score=733.11 Aligned_cols=542 Identities=24% Similarity=0.349 Sum_probs=433.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 901 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYST--SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 978 (1455)
Q Consensus 901 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 978 (1455)
+++.++........++++....+........... ..++.+++++.++..++.+.+.+.....+.+...+++.++++++
T Consensus 29 ~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l 108 (592)
T PRK10790 29 VLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAA 108 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566666677777766642111111110 11222344444556666777788888889999999999999999
Q ss_pred hcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 979 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1058 (1455)
Q Consensus 979 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~ 1058 (1455)
++.|.++|++.+.|++++|+++|++.+++.+...+..++..+..+++.++++.+.+|++.++++..+.+...+...+.+.
T Consensus 109 ~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~~ 188 (592)
T PRK10790 109 LRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQRY 188 (592)
T ss_pred HcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888888888877777777777777765543332222222222223333
Q ss_pred HHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 000511 1059 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL-SLRLQLLAAFIISFIA 1137 (1455)
Q Consensus 1059 sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl-~~~l~~~~~~~~~~~~ 1137 (1455)
.+...+......+....++.|+++|+.+||+|+.|+.+.+++.+..+...+..+.....+.+. .....++..++..++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (592)
T PRK10790 189 STPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGLL 268 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334456677899999999999999999999999999988777666655444333222 2222222222111111
Q ss_pred HHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCc
Q 000511 1138 TMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQG 1217 (1455)
Q Consensus 1138 ~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g 1217 (1455)
+ +.+. ...+..+.|.+..++.+...+..++..+...+.++++...+.+|+.++++.++++.... ..++..+
T Consensus 269 ~--~~~~---~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~----~~~~~~~ 339 (592)
T PRK10790 269 M--LFGF---SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGND----DRPLQSG 339 (592)
T ss_pred H--HHHH---HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCC----ccCCCCC
Confidence 1 1111 11345678888888999999999999999999999999999999999998765432111 1233457
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++++.+|++|+
T Consensus 340 ~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~ 418 (592)
T PRK10790 340 RIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVA 418 (592)
T ss_pred eEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheE
Confidence 89999999999753 57999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000511 1298 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1455)
Q Consensus 1298 ~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~IL 1375 (1455)
||||||.+|+|||||||.+++..+|++++++++++|++++++++ |+||.++|+|.+||||||||++||||++++|+||
T Consensus 419 ~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~il 498 (592)
T PRK10790 419 MVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQIL 498 (592)
T ss_pred EEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999888999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhh
Q 000511 1376 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1376 lLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
|||||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|+||++++ +.|++|++.+
T Consensus 499 llDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~-~~y~~l~~~~ 575 (592)
T PRK10790 499 ILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQ-GRYWQMYQLQ 575 (592)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCC-CHHHHHHHHH
Confidence 9999999999999999999999988899999999999999999999999999999999999999875 6999999754
No 18
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1e-73 Score=729.99 Aligned_cols=543 Identities=25% Similarity=0.353 Sum_probs=443.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000511 903 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 982 (1455)
Q Consensus 903 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p 982 (1455)
+.++...+.....++++.+.+.............+...++++.++..++.+++.+...+.+.+....++..+++++++.|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~ 112 (582)
T PRK11176 33 ALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMP 112 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33344444445555666555432211111111122223344556666777777777888889999999999999999999
Q ss_pred ccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 983 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1062 (1455)
Q Consensus 983 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l 1062 (1455)
..+|++.+.|++++|+++|++.+.+.+...+..++..++.+++.++++.+.+|+++++++..+++...+.....+..++.
T Consensus 113 ~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~ 192 (582)
T PRK11176 113 VSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNI 192 (582)
T ss_pred HHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988888888888888888888888888887766655544444444444444444444
Q ss_pred HHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1063 RRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVI 1142 (1455)
Q Consensus 1063 ~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~ 1142 (1455)
.+......+.+.+++.|.++|+.+||+|+.++.+.+++.+..+...+..........|.....+++..+...++..+...
T Consensus 193 ~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~ 272 (582)
T PRK11176 193 SKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASF 272 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445666778899999999999999999999999999999999888887777666666665555544322222111111
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEE
Q 000511 1143 GSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQ 1222 (1455)
Q Consensus 1143 ~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~ 1222 (1455)
. ...+..+.|.+..++.+...+..++..+...+.+++....+.+|+.++.+.+++...+.. ...|..+.|+|+
T Consensus 273 ~----~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~---~~~~~~~~i~~~ 345 (582)
T PRK11176 273 P----SVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR---VIERAKGDIEFR 345 (582)
T ss_pred H----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc---CCCCCCCeEEEE
Confidence 0 012456788888889999999999999999999999999999999999987665322111 112445689999
Q ss_pred EEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCC
Q 000511 1223 NVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQS 1302 (1455)
Q Consensus 1223 nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQd 1302 (1455)
||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++|||||
T Consensus 346 ~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~ 425 (582)
T PRK11176 346 NVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQN 425 (582)
T ss_pred EEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccC
Confidence 99999987667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcHHHhcCcCC--CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000511 1303 PFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1455)
Q Consensus 1303 p~lf~gTIreNLdp~~--~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLD 1378 (1455)
|++|+|||||||..+. ..+|++++++++.++++++++++ ||||.+||+|.+|||||||||+||||++++|+|||||
T Consensus 426 ~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililD 505 (582)
T PRK11176 426 VHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILD 505 (582)
T ss_pred ceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEE
Confidence 9999999999998763 36899999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhh
Q 000511 1379 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1379 EaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
||||+||++|++.+.+.|++..+++|+|+||||+++++.||+|++|++|+|+|.|+|++|++++ +.|++|++.+
T Consensus 506 EptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~-~~y~~l~~~~ 579 (582)
T PRK11176 506 EATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQN-GVYAQLHKMQ 579 (582)
T ss_pred CccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCC-ChHHHHHHHH
Confidence 9999999999999999999988899999999999999999999999999999999999999875 6999999753
No 19
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3e-73 Score=737.86 Aligned_cols=530 Identities=23% Similarity=0.324 Sum_probs=430.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000511 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 981 (1455)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 981 (1455)
+..++...+....++.++...|.............+..+++++.++..++.+++.++..+.+.+...+++..+++++++.
T Consensus 154 ~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l 233 (694)
T TIGR03375 154 IASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKKADLILSAKLFERVLGL 233 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444455555666666666553211111111222333444455667778888889999999999999999999999999
Q ss_pred cccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 982 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1061 (1455)
Q Consensus 982 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~ 1061 (1455)
|++| ++.++|++++|+ +|++.+.+.+...+...+..++.++..++++.+.+|+++++.+..++++..+..++.+..++
T Consensus 234 ~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 311 (694)
T TIGR03375 234 RMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQRPLSR 311 (694)
T ss_pred Cccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 788999999999 79999998887776666666666666666677777776655444434443344444444444
Q ss_pred HHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH
Q 000511 1062 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII---SFIAT 1138 (1455)
Q Consensus 1062 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~---~~~~~ 1138 (1455)
..+...+..+...+++.|+++|+.+||+|++|+.+.+++.+..++..+..+.....+.+.....+++..+.. .+++.
T Consensus 312 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~ 391 (694)
T TIGR03375 312 LAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGV 391 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455567778899999999999999999999999999998888877777665555554444444333221 11111
Q ss_pred HHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCcc
Q 000511 1139 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGL 1218 (1455)
Q Consensus 1139 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~ 1218 (1455)
..+. .+..+.|.+..++.+...+..++..+...+.++.....+.+|+.++++.++|...... .....+..|.
T Consensus 392 ~~v~-------~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~-~~~~~~~~~~ 463 (694)
T TIGR03375 392 YLIS-------DGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTR-FLHRPRLQGE 463 (694)
T ss_pred HHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-CCCCCCccce
Confidence 1121 3456788888899999999999999999999999999999999999988776432111 1111234678
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++++++|++++|
T Consensus 464 I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~ 543 (694)
T TIGR03375 464 IEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGY 543 (694)
T ss_pred EEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEE
Confidence 99999999997666789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000511 1299 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1455)
Q Consensus 1299 VpQdp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~IL 1375 (1455)
|||||++|+|||||||.++++ .+|++++++++.++++++++++ |+||.+||+|.+||||||||++||||++++|+|+
T Consensus 544 v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~il 623 (694)
T TIGR03375 544 VPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPIL 623 (694)
T ss_pred ECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999998865 7899999999999999999999 9999999999999999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1376 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1376 lLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
|||||||+||++||+.|++.|++..+++|+|+||||++++..||+|+||++|+++|.|+|+||+++
T Consensus 624 iLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 624 LLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 999999999999999999999998899999999999999999999999999999999999999875
No 20
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-73 Score=670.06 Aligned_cols=513 Identities=24% Similarity=0.343 Sum_probs=438.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHH
Q 000511 933 STSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFI 1012 (1455)
Q Consensus 933 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~ 1012 (1455)
....+++.++++.++..++.+.+......++.++...+|.++++++.+.+..+-+..|+|++....+..++.++..+...
T Consensus 38 ~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ry 117 (559)
T COG4988 38 SLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARY 117 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 34456667777777888888888888888999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHh
Q 000511 1013 LNILLANFVGLLGIAVVLSYVQVF---FLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRA 1089 (1455)
Q Consensus 1013 l~~~~~~~~~~l~~~~~~~~~~~~---~~l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIra 1089 (1455)
+.....+.+..+.+++.+++.+|. ++++..|++.++..+--. ..+...+..-.+...+.+||.|.++|+.|+|+
T Consensus 118 LPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~---~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~ 194 (559)
T COG4988 118 LPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGL---AAKDASEKQFSALARLSGHFLDRLRGLETLRA 194 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 888888888777777777776664 444556666655443211 11111222233445677899999999999999
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHH
Q 000511 1090 FKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIV 1169 (1455)
Q Consensus 1090 f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~ 1169 (1455)
||..+...++..+..++..+..+....++.--+..+|++.++-+..+++...+..-+. +..+....-+++..+-.+.
T Consensus 195 f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~---G~ltl~~~l~~LiLAPEff 271 (559)
T COG4988 195 FGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGE---GDLTLFAGLFVLILAPEFF 271 (559)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---CCccHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999999999999999998877666665554322211 2344444556666778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEE
Q 000511 1170 SLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQV 1249 (1455)
Q Consensus 1170 ~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~Gekv 1249 (1455)
.++..+-..|........+.+.+..+.+.|.+...........|..+.+++.+|++++|+++. ++++|+||+++|||++
T Consensus 272 ~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~t 350 (559)
T COG4988 272 QPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLT 350 (559)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEE
Confidence 999999999999999999999999999887765332222223344455677779999998654 8999999999999999
Q ss_pred EEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCC-CChHHHHHH
Q 000511 1250 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSV 1328 (1455)
Q Consensus 1250 gIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~-~~d~ei~~a 1328 (1455)
||||+||||||||+++|+|+.+|++|+|.+||+|+.+++.+.+|+++++|||+|++|+|||||||.+++. .+|++|+++
T Consensus 351 alvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~a 430 (559)
T COG4988 351 ALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAA 430 (559)
T ss_pred EEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998876 689999999
Q ss_pred HHHhcHHHHHHh-CCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEE
Q 000511 1329 LEKCHVKEEVEA-VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVIT 1407 (1455)
Q Consensus 1329 L~~~~l~~~i~~-lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~ 1407 (1455)
+++++++++++. .||||.+||+|.+|||||+||++||||++++++++++|||||+||.|||+.|++.|.+.++++|||+
T Consensus 431 l~~a~l~~~v~~p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~ 510 (559)
T COG4988 431 LDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLV 510 (559)
T ss_pred HHHhcHHHhhcCCCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEE
Confidence 999999999987 4999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhh
Q 000511 1408 IAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1408 IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
||||++.++++|+|+|||+|+++|.|+|++|.+++ +.|+.|+.++
T Consensus 511 itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~-~~y~~l~~~q 555 (559)
T COG4988 511 ITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQ-GLYANLLKQQ 555 (559)
T ss_pred EEcChHHHhcCCEEEEecCCceeccCCHHHHhhcC-cHHHHHHHHH
Confidence 99999999999999999999999999999999875 6999999864
No 21
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-75 Score=734.31 Aligned_cols=516 Identities=23% Similarity=0.307 Sum_probs=421.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHH
Q 000511 933 STSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFI 1012 (1455)
Q Consensus 933 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~ 1012 (1455)
....+...|+.+++...+..++...++.+.+.|...++|.+.+++++|++++|||.+..|++..|++.|++.+++.+...
T Consensus 69 ~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geK 148 (1228)
T KOG0055|consen 69 EVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEK 148 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHH
Confidence 44567777888888888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCc
Q 000511 1013 LNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKS 1092 (1455)
Q Consensus 1013 l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~ 1092 (1455)
+..++..+..+++.+++.++..|.+.++++++..+.......+.+..-.....+..+.+.--+...|++.+++|+.||+.
T Consensus 149 vg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~g 228 (1228)
T KOG0055|consen 149 VGNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNG 228 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcC
Confidence 99999999999888888888888776655444433322222222222222223333444455678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 000511 1093 EDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLL 1172 (1455)
Q Consensus 1093 e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l 1172 (1455)
|+...++|.+.++...|..... ..|.++.....-.++.+..+....++.. .......++|.+..++..++.-...+
T Consensus 229 q~~e~~ry~~~L~~~~k~gi~~---g~~~G~~~G~~~~~~~~~~a~~~WyG~~-li~~~~~~~g~v~~v~~~vl~g~~sL 304 (1228)
T KOG0055|consen 229 EKKEIERYSKALENALKFGIKK---GLFKGLGLGFTFFLLFASYALAFWYGST-LILNGGYNGGDVITVFFSVLIGGMSL 304 (1228)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhHHHHHHHHHHHHHHHHHHHH-HHhcCCCCCceEEEEEeehhhhhhhh
Confidence 9999999999998888776543 2333332222222221212222222211 01112345555555555555556667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCC-CcceeeeeEEEeCCcEEEE
Q 000511 1173 GNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFTIEGGTQVGI 1251 (1455)
Q Consensus 1173 ~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vL~~isl~I~~GekvgI 1251 (1455)
+........+.++.+|..++.+.++..++...........-..+|.|+|+||+|+|+... .++|+|+||+|++||.||+
T Consensus 305 gqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~val 384 (1228)
T KOG0055|consen 305 GQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVAL 384 (1228)
T ss_pred hccccchHHHhccccchHHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEE
Confidence 777778888889999999999998765543211111112223579999999999997542 3799999999999999999
Q ss_pred ECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCC-CChHHHHHHHH
Q 000511 1252 VGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLE 1330 (1455)
Q Consensus 1252 vGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~-~~d~ei~~aL~ 1330 (1455)
||+|||||||++++|.|+|+|++|+|+|||.|+.+++.++||++||+|.|||+||++||+|||.++.+ .+++|+.+|++
T Consensus 385 VG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k 464 (1228)
T KOG0055|consen 385 VGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAK 464 (1228)
T ss_pred ECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999874 58999999999
Q ss_pred HhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 000511 1331 KCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITI 1408 (1455)
Q Consensus 1331 ~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~I 1408 (1455)
.++.++++..+ |+||.+||+|..||||||||+||||||+|+|+||+||||||+||+++|+.+|++|++..+|+|.|+|
T Consensus 465 ~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivV 544 (1228)
T KOG0055|consen 465 AANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVV 544 (1228)
T ss_pred HccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEE
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhh
Q 000511 1409 AHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1409 aHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
||||+||+++|+|+||++|+|+|.|+|+||++++ |.|++|++.+
T Consensus 545 aHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q 588 (1228)
T KOG0055|consen 545 AHRLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQ 588 (1228)
T ss_pred eeehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHH
Confidence 9999999999999999999999999999999987 8999999865
No 22
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.9e-72 Score=713.23 Aligned_cols=504 Identities=22% Similarity=0.300 Sum_probs=416.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHH
Q 000511 941 LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANF 1020 (1455)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~ 1020 (1455)
++++.++..++.++..+.....+.+...+++.++++++++.|+.+|++.++|++++|+++|++.+++.+...+..++..+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~ 145 (574)
T PRK11160 66 VRGAAIGRTAGRYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAAL 145 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566677777777888889999999999999999999999999999999999999999999999888888888888
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHH
Q 000511 1021 VGLLGIAVVLSYVQVFFLLLLVPFWF-IYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAK 1099 (1455)
Q Consensus 1021 ~~~l~~~~~~~~~~~~~~l~~~p~~~-~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~ 1099 (1455)
+.+++.++++++.+|.++++++..+. ++..+..++.+..+...+...++.+.+.+.+.|.++|+++||+|+.|+++.++
T Consensus 146 ~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~ 225 (574)
T PRK11160 146 VVILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQ 225 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHH
Confidence 88888888888888877665432222 22223334444444444555666778889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000511 1100 FKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYA-APIVSLLGNFLSS 1178 (1455)
Q Consensus 1100 ~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~-~~~~~~l~~l~~~ 1178 (1455)
+.+..++..+..+.......+.....+++..+...++..+..... .+..+.|.+..++.|. ......+..+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-----~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~ 300 (574)
T PRK11160 226 LEQTEQQWLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGGV-----GGNAQPGALIALFVFAALAAFEALMPVAGA 300 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888888777666666555555544433222211111111 1234556555555554 3334566777778
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCh
Q 000511 1179 FTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAG 1258 (1455)
Q Consensus 1179 ~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSG 1258 (1455)
+.+......+.+|+.++++.+++........ ..+..+.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||
T Consensus 301 ~~~~~~~~~s~~ri~~ll~~~~~~~~~~~~~--~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsG 378 (574)
T PRK11160 301 FQHLGQVIASARRINEITEQKPEVTFPTTST--AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCG 378 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcccC--CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCC
Confidence 8888999999999999998776532111111 11345789999999999765567999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCC-CCChHHHHHHHHHhcHHHH
Q 000511 1259 KSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEE 1337 (1455)
Q Consensus 1259 KSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~-~~~d~ei~~aL~~~~l~~~ 1337 (1455)
||||+++|.|+++|++|+|.+||+|+++++.+++|+++++|||||++|+|||||||..+. ..+|+++++++++++++++
T Consensus 379 KSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~ 458 (574)
T PRK11160 379 KSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKL 458 (574)
T ss_pred HHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHH
Confidence 999999999999999999999999999999999999999999999999999999998875 4689999999999999999
Q ss_pred HHh-CCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHh
Q 000511 1338 VEA-VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL 1416 (1455)
Q Consensus 1338 i~~-lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~ 1416 (1455)
+++ .||||.+||+|.+||||||||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.
T Consensus 459 i~~p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~ 538 (574)
T PRK11160 459 LEDDKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLE 538 (574)
T ss_pred HcCccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHH
Confidence 985 4999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred hhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHh
Q 000511 1417 NMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1452 (1455)
Q Consensus 1417 ~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~ 1452 (1455)
.||+|++|++|+++|.|+|+||+++ +|.|++|++.
T Consensus 539 ~~d~i~~l~~G~i~~~g~~~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 539 QFDRICVMDNGQIIEQGTHQELLAQ-QGRYYQLKQR 573 (574)
T ss_pred hCCEEEEEeCCeEEEeCCHHHHHhc-CcHHHHHHhh
Confidence 9999999999999999999999986 4699999874
No 23
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.8e-73 Score=654.55 Aligned_cols=499 Identities=22% Similarity=0.345 Sum_probs=420.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHH
Q 000511 944 FCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGL 1023 (1455)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~ 1023 (1455)
+++...+..++..+.......++-.++|.++++++...+..-..+...|+++||+..|++.+|+.+-..+...+..++..
T Consensus 67 ~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~ 146 (573)
T COG4987 67 LAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLI 146 (573)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHH
Confidence 34455555555555666678888899999999999999999999999999999999999999999999999888888888
Q ss_pred HHhhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHH
Q 000511 1024 LGIAVVLSYVQVFFLLLLVPF-WFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1102 (1455)
Q Consensus 1024 l~~~~~~~~~~~~~~l~~~p~-~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~ 1102 (1455)
++..+.+++.+|++++.+... ++....+.-.+.+..|...+.-...+..++++|.|.+.|....+.||.++.|.+.+.+
T Consensus 147 ~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~ 226 (573)
T COG4987 147 AVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEA 226 (573)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHH
Confidence 888888888888776644333 3333444445555666666666778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000511 1103 HVVLYQRTSYSELTASLWLSLRLQLLAAFIIS-FIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFL-SSFT 1180 (1455)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~-~~~~ 1180 (1455)
..+.+.+.......+..|....+.++.++++. .+.+++..... +..+.-.+.+++..++.....+.-+. ..+.
T Consensus 227 ~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~-----G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~ 301 (573)
T COG4987 227 TEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGA-----GALAQPGAALALLVIFAALEAFEPLAPGAFQ 301 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcC-----CCcchhHHHHHHHHHHHHHHHHhhhcchhHH
Confidence 99999999999999999999988888876655 33333332111 11121112222222233344444444 6678
Q ss_pred HHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHH
Q 000511 1181 ETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKS 1260 (1455)
Q Consensus 1181 ~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKS 1260 (1455)
++.+...|++|+.+..+.++|...+....+ -+.+ .++++||+|+|+++.+++|+|+||++++||||||+||||||||
T Consensus 302 ~lgq~~~Sa~Rl~~i~~q~~e~~~~~~~~~--~~~~-~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKS 378 (573)
T COG4987 302 HLGQVIASARRLNDILDQKPEVTFPDEQTA--TTGQ-ALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKS 378 (573)
T ss_pred HhhHHHHHHHHHhhhccCCcccCCCccccC--Cccc-eeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHH
Confidence 888999999999999988777533211111 1122 8999999999998888999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHH
Q 000511 1261 SILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVE 1339 (1455)
Q Consensus 1261 TLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~ 1339 (1455)
|++++|.|.++|++|+|.++|.+++.++.+++|+.|++++|.+++|+||+|+||...++ .+|||+|++|+++||.+.++
T Consensus 379 TllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 379 TLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987654 69999999999999999999
Q ss_pred hC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh
Q 000511 1340 AV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN 1417 (1455)
Q Consensus 1340 ~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~ 1417 (1455)
+. ||+|.+||+|.+||||||||++|||+||++.++++|||||.+||++||+.|.+.|.+..+|+|+|+||||+..++.
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~ 538 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLER 538 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhh
Confidence 99 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHH
Q 000511 1418 MDEILILDHGHLVEQGNPQTLLQDECSVFSSFVR 1451 (1455)
Q Consensus 1418 ~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~ 1451 (1455)
||||+|||+|+++|+|+|.+|+++ +|.|++|++
T Consensus 539 ~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q 571 (573)
T COG4987 539 MDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQ 571 (573)
T ss_pred cCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhc
Confidence 999999999999999999999995 579999986
No 24
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.4e-72 Score=716.74 Aligned_cols=544 Identities=25% Similarity=0.375 Sum_probs=459.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000511 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 981 (1455)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 981 (1455)
++.++..++..+.+++++...+.............+..+++++.++..++.+++.++....+.+....++..+++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~~ 100 (571)
T TIGR02203 21 VAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLGL 100 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34445555555556666655543211111112233344566677777888888888999999999999999999999999
Q ss_pred cccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 982 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1061 (1455)
Q Consensus 982 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~ 1061 (1455)
|.++|++.+.|++++|+++|++.+++.+...+..++..++.+++.++++.+.+|+++++++.+.++...+...+.+..++
T Consensus 101 ~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~~~ 180 (571)
T TIGR02203 101 PVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRLRR 180 (571)
T ss_pred CHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999989888988888888888888899988877776666666666666666666
Q ss_pred HHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1062 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1141 (1455)
Q Consensus 1062 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1141 (1455)
..+...+..++..+.+.|+++|+.+||+++.++++.+++.+..+...+..........+.....+++..+...++.+...
T Consensus 181 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 260 (571)
T TIGR02203 181 ISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFIAL 260 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667777888999999999999999999999999999999999998888877777777666555554432222111111
Q ss_pred HhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEE
Q 000511 1142 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1221 (1455)
Q Consensus 1142 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1221 (1455)
.. ...+..++|.+..++.++..+..++..+...+.++.....+.+|+.++++.++++..... +. -+..+.|++
T Consensus 261 ~~----~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~-~~--~~~~~~i~~ 333 (571)
T TIGR02203 261 FQ----AQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR-AI--ERARGDVEF 333 (571)
T ss_pred HH----HHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-CC--CCCCCeEEE
Confidence 10 013456789999999999999999999999999999999999999999987665422111 11 124578999
Q ss_pred EEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000511 1222 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1301 (1455)
Q Consensus 1222 ~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQ 1301 (1455)
+||+|+|+++.+++|+|+||+|+|||+++|+|+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++||||
T Consensus 334 ~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 413 (571)
T TIGR02203 334 RNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQ 413 (571)
T ss_pred EEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEcc
Confidence 99999997655689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHhcCcCC--CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000511 1302 SPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1377 (1455)
Q Consensus 1302 dp~lf~gTIreNLdp~~--~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlL 1377 (1455)
||++|+|||||||..++ +.+|+++++++++++++++++++ ||||.++|+|.+||||||||+|||||++++|+|++|
T Consensus 414 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illL 493 (571)
T TIGR02203 414 DVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILIL 493 (571)
T ss_pred CcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999875 57899999999999999999998 999999999999999999999999999999999999
Q ss_pred eccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhh
Q 000511 1378 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1378 DEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
|||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|++++ +.|+++++.+
T Consensus 494 DEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~-~~~~~~~~~~ 568 (571)
T TIGR02203 494 DEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARN-GLYAQLHNMQ 568 (571)
T ss_pred eCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcC-CHHHHHHHHh
Confidence 99999999999999999999988999999999999999999999999999999999999999865 6999988753
No 25
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=7.3e-72 Score=724.22 Aligned_cols=541 Identities=23% Similarity=0.330 Sum_probs=438.1
Q ss_pred HHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Q 000511 905 ILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVL 984 (1455)
Q Consensus 905 ~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ 984 (1455)
++........++.++...|..-..........+..+++++.++..++.+++.++....+.+...+++.++++++++.|+.
T Consensus 149 ~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~ 228 (694)
T TIGR01846 149 LALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPLG 228 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 33444444556666655553211111112223344555666667788888999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 985 FFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRR 1064 (1455)
Q Consensus 985 ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l~~ 1064 (1455)
||++.++|++++|+ +|++.+.+.+...+..++..++.++..++++++.+|.++++++..++++..+.....+..+...+
T Consensus 229 ~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~ 307 (694)
T TIGR01846 229 YFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRKRVE 307 (694)
T ss_pred HcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 69999998877766666655655555566777777776655444433333333333322233333
Q ss_pred HHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000511 1065 LDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGS 1144 (1455)
Q Consensus 1065 l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~ 1144 (1455)
...+..+...+++.|+++|+.+||+||.|+.+.+++.+..++..+..+.....+.+.....+++..+...++.++.....
T Consensus 308 ~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv 387 (694)
T TIGR01846 308 DKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHLV 387 (694)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 33345567789999999999999999999999999999999888888777766666666555554432222111111100
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEE
Q 000511 1145 RGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNV 1224 (1455)
Q Consensus 1145 ~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nv 1224 (1455)
..+.++.|.+..+..+...+..++..+...+.++++...+.+|+.++++.++|+..... . ...+..|.|+|+||
T Consensus 388 ----~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~-~-~~~~~~~~i~~~~v 461 (694)
T TIGR01846 388 ----IGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSAGL-A-ALPELRGAITFENI 461 (694)
T ss_pred ----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCC-C-CCCCCCCeEEEEEE
Confidence 13456788888888999999999999999999999999999999999988776432111 1 11123578999999
Q ss_pred EEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCC
Q 000511 1225 TMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPF 1304 (1455)
Q Consensus 1225 s~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~ 1304 (1455)
+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|++||+|+++++.+++|+++++|||||.
T Consensus 462 sf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~ 541 (694)
T TIGR01846 462 RFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENV 541 (694)
T ss_pred EEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCe
Confidence 99998766789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccC
Q 000511 1305 LFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1381 (1455)
Q Consensus 1305 lf~gTIreNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaT 1381 (1455)
+|+|||||||..++ ..+|++++++++.++++++++++ |+||.++++|.+||||||||++||||++++|+||||||||
T Consensus 542 lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpt 621 (694)
T TIGR01846 542 LFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEAT 621 (694)
T ss_pred ehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCC
Confidence 99999999998865 46899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhh
Q 000511 1382 ANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1382 S~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
|+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|+||++++ |.|++|++.+
T Consensus 622 s~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~~-~~y~~l~~~~ 692 (694)
T TIGR01846 622 SALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQ-GLYARLWQQQ 692 (694)
T ss_pred cCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHcC-ChHHHHHHhh
Confidence 9999999999999999988899999999999999999999999999999999999999865 7999999753
No 26
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-74 Score=645.73 Aligned_cols=493 Identities=24% Similarity=0.407 Sum_probs=400.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhh
Q 000511 949 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAV 1028 (1455)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~ 1028 (1455)
+++.-+|++++.....-..+.+-.++++++....+.|.-...+|+.+.-+.+..+.+. .+.....++.-.+.-+...++
T Consensus 273 G~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~v 351 (790)
T KOG0056|consen 273 GFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMV 351 (790)
T ss_pred cchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhh
Confidence 4566678888888888889999999999999999999999999998877766555443 222222222222222222222
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHH
Q 000511 1029 -VLSYVQVFFLLLLVPFWFIYSKL----QFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEH 1103 (1455)
Q Consensus 1029 -~~~~~~~~~~l~~~p~~~~~~~i----~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~ 1103 (1455)
......+|+.+++......|..+ ..+-.+..|.+...+.++++ .-.+++-+.+|+|-|++|++..++|.+.
T Consensus 352 YF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrA----r~vDsllNFETVKyy~Ae~yEverYreA 427 (790)
T KOG0056|consen 352 YFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRA----RQVDSLLNFETVKYYNAEDYEVERYREA 427 (790)
T ss_pred hhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhh----hhhhhhhcchhhhccCchhhhHHHHHHH
Confidence 22334677777766666555433 22233444445444555543 4578899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1104 VVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETE 1183 (1455)
Q Consensus 1104 ~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e 1183 (1455)
++.+|+..++....-..++..-..+..+......++.+ ........+.|...+..+|.+++..+++++-..+..++
T Consensus 428 il~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~a----Y~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ 503 (790)
T KOG0056|consen 428 ILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCA----YRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQ 503 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheee----eeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHH
Confidence 99999988776554444443333322221111111111 11123455778888999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHH
Q 000511 1184 KEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSIL 1263 (1455)
Q Consensus 1184 ~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl 1263 (1455)
++..-.|++.++++.++|-.+.+..+|- --.+|.|+|+||+|.|+|+ +|||+||||+++||+.||+|||||+||||++
T Consensus 504 ~nfiDmEnmfdllkee~eVvd~P~a~pl-~~~~G~i~fsnvtF~Y~p~-k~vl~disF~v~pGktvAlVG~SGaGKSTim 581 (790)
T KOG0056|consen 504 KNFIDMENMFDLLKEEPEVVDLPGAPPL-KVTQGKIEFSNVTFAYDPG-KPVLSDISFTVQPGKTVALVGPSGAGKSTIM 581 (790)
T ss_pred HhhhhHHHHHHHhhcCchhhcCCCCCCc-cccCCeEEEEEeEEecCCC-CceeecceEEecCCcEEEEECCCCCchhHHH
Confidence 9999999999999887775433332322 2357999999999999876 5799999999999999999999999999999
Q ss_pred HHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC-
Q 000511 1264 NALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV- 1341 (1455)
Q Consensus 1264 ~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l- 1341 (1455)
++|+|++|.++|+|+|||+||+++..+.||++||+||||.+||++||..||.+... .+|||+.+|.+.++++|.|-++
T Consensus 582 RlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fP 661 (790)
T KOG0056|consen 582 RLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFP 661 (790)
T ss_pred HHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999998764 5899999999999999999999
Q ss_pred -CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCE
Q 000511 1342 -GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDE 1420 (1455)
Q Consensus 1342 -gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~Dr 1420 (1455)
|++|.|||+|-.||||||||+++||++||+|.|++||||||+||..||+.||.++.+..+++|.|+|||||+||.++|.
T Consensus 662 egY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ 741 (790)
T KOG0056|consen 662 EGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADL 741 (790)
T ss_pred hhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCeEEEeCChhHHhccCCcHHHHHHHh
Q 000511 1421 ILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1452 (1455)
Q Consensus 1421 I~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~ 1452 (1455)
|+|+++|+|+|.|+|+||+++++|.|++||+.
T Consensus 742 ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~ 773 (790)
T KOG0056|consen 742 ILVISNGRIVERGRHEELLKRDGGAYADMWQA 773 (790)
T ss_pred EEEEeCCeEeecCcHHHHHhccCCcHHHHHHH
Confidence 99999999999999999999999999999953
No 27
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=6.2e-71 Score=692.50 Aligned_cols=543 Identities=23% Similarity=0.279 Sum_probs=470.5
Q ss_pred chHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 264 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 343 (1455)
Q Consensus 264 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 343 (1455)
+-++..++-|++.++-..+..++..+++++.|++.+.++|.+-.+.+......+++++.+..++.+++.....+...+++
T Consensus 143 ~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~ 222 (709)
T COG2274 143 SWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLG 222 (709)
T ss_pred HhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556667778888889999999999999999999999999987667777888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000511 344 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 421 (1455)
Q Consensus 344 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~ 421 (1455)
.|+...+...+|+|.+++|...++++++|++++.++ |.+.|.+++.. +..+...++-++....|.++ -+.-+++++
T Consensus 223 ~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~y-s~~L~li~l 300 (709)
T COG2274 223 KRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLY-SWKLTLIVL 300 (709)
T ss_pred HHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 999999999999999999999999999999999886 88888886543 33344555555444444444 344445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 422 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 501 (1455)
Q Consensus 422 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 501 (1455)
+.+++.+.+..++.+.+++..++.++...++.+.+.|.++||++||..+.|+.+..++++.-.+.++...+.........
T Consensus 301 ~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 380 (709)
T COG2274 301 AAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILN 380 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 56666667788888999999999999999999999999999999999999999999999998888888888877776666
Q ss_pred HHHHHHHHH--HHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhh
Q 000511 502 FFWATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 579 (1455)
Q Consensus 502 ~~~~~~~~~--~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 579 (1455)
.+......+ +.+++||++.+.++.+|.|+++++.++.+.+..|+..+...+..+.++.++.+|+.+.++.|...+...
T Consensus 381 ~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~ 460 (709)
T COG2274 381 TIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDK 460 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 555444433 356889999999999999999999999999999999999999999999999999999998765433111
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC
Q 000511 580 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 659 (1455)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~ 659 (1455)
... ......+.|+++|++|+|..+++ ++|+|+||+|++||.++|||+||||||||+|+|+|.++|
T Consensus 461 ~~~-----------~~~~~~g~I~~~nvsf~y~~~~~----~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p 525 (709)
T COG2274 461 TLI-----------HLPKLQGEIEFENVSFRYGPDDP----PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKP 525 (709)
T ss_pred ccc-----------cccccCceEEEEEEEEEeCCCCc----chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 000 11245678999999999986532 359999999999999999999999999999999999999
Q ss_pred CCcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCCCC-HHHHHHHHHHhcchHHHhhccCCCcccccC
Q 000511 660 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYD-PQSYSETLKACTLDVDISLMVGGDMAYIGE 725 (1455)
Q Consensus 660 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~-~~~~~~v~~~~~l~~di~~l~~gd~t~ig~ 725 (1455)
++|+|.++| +|+||+|++.+|+|||+|||.++.+.. .|+..++++..+.++++..+|.|++|.+||
T Consensus 526 ~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E 605 (709)
T COG2274 526 QQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGE 605 (709)
T ss_pred CCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccccccc
Confidence 999999997 599999999999999999999998754 478888888889999999999999999999
Q ss_pred CCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCC
Q 000511 726 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 805 (1455)
Q Consensus 726 ~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G 805 (1455)
+|.+||||||||++||||++++|+|+||||||||||+++++.|.+++ .. ...++|+|+||||++.+++||+|+||++|
T Consensus 606 ~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L-~~-~~~~~T~I~IaHRl~ti~~adrIiVl~~G 683 (709)
T COG2274 606 GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNL-LQ-ILQGRTVIIIAHRLSTIRSADRIIVLDQG 683 (709)
T ss_pred CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHH-HH-HhcCCeEEEEEccchHhhhccEEEEccCC
Confidence 99999999999999999999999999999999999999999999984 33 56789999999999999999999999999
Q ss_pred eEEEecCHHHHHhccccCcc
Q 000511 806 QVKWIGSSADLAVSLYSGFW 825 (1455)
Q Consensus 806 ~i~~~g~~~~l~~~~~~~~~ 825 (1455)
+|+++|+++|+++..+.+.+
T Consensus 684 kiv~~gs~~ell~~~g~y~~ 703 (709)
T COG2274 684 KIVEQGSHEELLAQGGLYAR 703 (709)
T ss_pred ceeccCCHHHHHHhcChHHH
Confidence 99999999999987665544
No 28
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2e-70 Score=699.14 Aligned_cols=545 Identities=23% Similarity=0.309 Sum_probs=432.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000511 900 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 979 (1455)
Q Consensus 900 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl 979 (1455)
+++..++..++....++++....|.... ......++.+++++.++..+..+....+..+...+...++..+++++++
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~iid~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ 100 (588)
T PRK13657 24 LAVANVLLAAATFAEPILFGRIIDAISG---KGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERII 100 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555556666777666653221 1112222333333334433334444444444555555666779999999
Q ss_pred cCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 980 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTS 1059 (1455)
Q Consensus 980 ~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~s 1059 (1455)
+.|..+|++.+.|++++|+++|++.+.+.+...+..++..++..++.++++.+.+|+++++++.+++++..+.+.+.+..
T Consensus 101 ~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~ 180 (588)
T PRK13657 101 QLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRKT 180 (588)
T ss_pred hCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999877766666666666666666666777778777666655555555666666666
Q ss_pred HHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1060 RELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATM 1139 (1455)
Q Consensus 1060 r~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 1139 (1455)
++..+...+..+.+.+++.|.++|+.+||+|+.++.+.+++.+..+...+..........+.....+++..+...++.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (588)
T PRK13657 181 KDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILVL 260 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666667777888999999999999999999999999999998888877766655555554444443332222211111
Q ss_pred HHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccE
Q 000511 1140 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLI 1219 (1455)
Q Consensus 1140 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I 1219 (1455)
.... ...+..+.|.+..++.++..+..++..+...+.++..+..+.+|+.++.+.+++........+. -+..+.|
T Consensus 261 g~~~----v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~I 335 (588)
T PRK13657 261 GAAL----VQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAIDL-GRVKGAV 335 (588)
T ss_pred HHHH----HHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCc-CCCCCeE
Confidence 1111 1134567888888899999999999999999999999999999999998765442211111111 1234689
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000511 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1455)
Q Consensus 1220 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~V 1299 (1455)
+++||+|+|+++ +++|+|+||+++|||++||+|+||||||||+++|+|+++|++|+|.+||.|+++++.+++|++++||
T Consensus 336 ~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v 414 (588)
T PRK13657 336 EFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVV 414 (588)
T ss_pred EEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999743 5699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCcHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000511 1300 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1376 (1455)
Q Consensus 1300 pQdp~lf~gTIreNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILl 1376 (1455)
||||.+|+|||||||.+++ ..+|+++++++++++++++++++ |+||.++++|.+||||||||++||||++++|+|+|
T Consensus 415 ~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~ili 494 (588)
T PRK13657 415 FQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILI 494 (588)
T ss_pred ecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998875 46899999999999999999998 99999999999999999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhhC
Q 000511 1377 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1454 (1455)
Q Consensus 1377 LDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~g 1454 (1455)
||||||+||++|++.|.+.|++..+++|+|+||||++.++.||||++|++|+++|.|+|++|+++ ++.|++|+++++
T Consensus 495 LDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 495 LDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLRAQG 571 (588)
T ss_pred EeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHHHhh
Confidence 99999999999999999999988789999999999999999999999999999999999999986 479999988653
No 29
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.4e-71 Score=663.88 Aligned_cols=536 Identities=20% Similarity=0.225 Sum_probs=440.6
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 267 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-GSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLK 345 (1455)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 345 (1455)
+.+.+..||.+..+.++.++.......-|.++.+++|.+.. .+....-.-....+..++++.+++...+.+.....+.+
T Consensus 139 ~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~r 218 (716)
T KOG0058|consen 139 LGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGER 218 (716)
T ss_pred HHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677888888888899999999999999999998876 33322223345566677888899999898989999999
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHHHH
Q 000511 346 LRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVA-LYLLYTQVKFAFVSGLAI 423 (1455)
Q Consensus 346 ~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~i~-~~lL~~~lg~a~l~g~~v 423 (1455)
+-..+...+|++.++...+++++..+|++++.++.|++.+.+.+ .++.+..-+.++...+ .+|++..+.++.+.-+ +
T Consensus 219 v~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i-~ 297 (716)
T KOG0058|consen 219 VVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLI-V 297 (716)
T ss_pred HHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHH-H
Confidence 99999999999999999999999999999999999999998754 4566665566665443 3445545555543322 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 424 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFF 503 (1455)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~ 503 (1455)
+.+.+.+..+++++.++..++.+++..+-.+...|.|++||+||+|+.|+...++..+.-++-++..+|......+....
T Consensus 298 ~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~ 377 (716)
T KOG0058|consen 298 VPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGS 377 (716)
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhH
Confidence 23333456677788888888888888888899999999999999999998877777665444344444433333333222
Q ss_pred HHH--HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhh
Q 000511 504 WAT--TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQA 581 (1455)
Q Consensus 504 ~~~--~~~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~ 581 (1455)
+.. ....++++.+|.|++.++.||++...+++.+-..+..++..+...++.++++..+-+|+.+|++.++.-+.. .
T Consensus 378 ~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~-G- 455 (716)
T KOG0058|consen 378 TNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLT-G- 455 (716)
T ss_pred HHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCC-C-
Confidence 222 224567788999999999999999999999999999999999999999999999999999999765432211 0
Q ss_pred cCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC
Q 000511 582 ANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH 661 (1455)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~ 661 (1455)
...| ....+.|+|+|++|+||.+++. ++|+|+||+|+|||.+|+||||||||||+.++|+.+|+|++
T Consensus 456 ~~~p----------~~~~G~IeF~~VsFaYP~Rp~~---~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pts 522 (716)
T KOG0058|consen 456 TLAP----------DHLQGVIEFEDVSFAYPTRPDV---PVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTS 522 (716)
T ss_pred cccc----------ccccceEEEEEeeeecCCCCCc---hhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 0011 1345789999999999987554 45999999999999999999999999999999999999999
Q ss_pred cEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000511 662 GSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKG 727 (1455)
Q Consensus 662 G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g 727 (1455)
|+|.+|| +||+|.|+|.||++||+|||.+|.+ .++|+..++.+.+..++.|..+|+|++|.|||+|
T Consensus 523 G~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 523 GRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKG 602 (716)
T ss_pred CeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcc
Confidence 9999998 5999999999999999999999975 5778899999999999999999999999999999
Q ss_pred CccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeE
Q 000511 728 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 807 (1455)
Q Consensus 728 ~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i 807 (1455)
..|||||||||||||||++||.||||||+|||||++++.. .+.++.. ..+++|||+|+||++.+++||+|+++++|++
T Consensus 603 ~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~l-Vq~aL~~-~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V 680 (716)
T KOG0058|consen 603 SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYL-VQEALDR-LMQGRTVLVIAHRLSTVRHADQIVVIDKGRV 680 (716)
T ss_pred ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHH-HHHHHHH-hhcCCeEEEEehhhhHhhhccEEEEEcCCeE
Confidence 9999999999999999999999999999999999997654 4444544 6778999999999999999999999999999
Q ss_pred EEecCHHHHHhcc
Q 000511 808 KWIGSSADLAVSL 820 (1455)
Q Consensus 808 ~~~g~~~~l~~~~ 820 (1455)
+|.|+|+|+++..
T Consensus 681 ~E~G~h~eLl~~~ 693 (716)
T KOG0058|consen 681 VEMGTHDELLSKP 693 (716)
T ss_pred EecccHHHHhhCc
Confidence 9999999999876
No 30
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.9e-70 Score=699.61 Aligned_cols=546 Identities=24% Similarity=0.365 Sum_probs=436.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000511 903 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 982 (1455)
Q Consensus 903 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p 982 (1455)
+.++........++.+....+..-..........++.+++++.++..++.+++.++....+.+....++..+++++++.|
T Consensus 26 ~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~ 105 (576)
T TIGR02204 26 ALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERVVADIRRAVFAHLISLS 105 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34444445555555555544421111111112223344445555566667777888888899999999999999999999
Q ss_pred ccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 983 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1062 (1455)
Q Consensus 983 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l 1062 (1455)
.++|++...|++++|+++|++.+++.....+..++..++.+++.++++++.+|++.++++...++...+...+.+..+..
T Consensus 106 ~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~ 185 (576)
T TIGR02204 106 PSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRKL 185 (576)
T ss_pred HHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888877777777777777777777765544433333333333444444445
Q ss_pred HHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1063 RRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVI 1142 (1455)
Q Consensus 1063 ~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~ 1142 (1455)
.+.....+....+++.|.++|+++||+|+.|+.+.+++.+..+...+..........|.......+..+...++..+...
T Consensus 186 ~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 265 (576)
T TIGR02204 186 SRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVLWVGAH 265 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666778899999999999999999999999999998888777766655555555544433332211111111110
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEE
Q 000511 1143 GSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQ 1222 (1455)
Q Consensus 1143 ~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~ 1222 (1455)
. ...+..+.|.+..+..+...+..++..+...+.++.....+.+|+.++++.++|...........+|..+.|+|+
T Consensus 266 ~----v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (576)
T TIGR02204 266 D----VIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEFE 341 (576)
T ss_pred H----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCCccCCcCCCceEEEE
Confidence 0 013456788888888899999999999999999999999999999999887654211111111223445789999
Q ss_pred EEEEEecCCC-CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeC
Q 000511 1223 NVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1301 (1455)
Q Consensus 1223 nvs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQ 1301 (1455)
||+|+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++|+||
T Consensus 342 ~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q 421 (576)
T TIGR02204 342 QVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQ 421 (576)
T ss_pred EEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEcc
Confidence 9999997543 579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000511 1302 SPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1455)
Q Consensus 1302 dp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLD 1378 (1455)
||++|+|||||||.++++ .+|++++++++++++.++++.+ |+||.++|+|.+||||||||++||||++++|+|||||
T Consensus 422 ~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ililD 501 (576)
T TIGR02204 422 DPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLD 501 (576)
T ss_pred CCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEEe
Confidence 999999999999998654 5789999999999999999998 9999999999999999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhh
Q 000511 1379 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1379 EaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
||||+||.+|++.+.+.+++..+++|+|+||||++.+..||||++|++|+++|.|+|++|+++ ++.|++|++.+
T Consensus 502 Epts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~-~~~~~~l~~~~ 575 (576)
T TIGR02204 502 EATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAK-GGLYARLARLQ 575 (576)
T ss_pred CcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHc-CChHHHHHhhc
Confidence 999999999999999999998889999999999999999999999999999999999999985 57999998753
No 31
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.9e-70 Score=691.71 Aligned_cols=463 Identities=21% Similarity=0.266 Sum_probs=383.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHH
Q 000511 944 FCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGL 1023 (1455)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~ 1023 (1455)
+.++..++.++..+.....+.+...+++.++++++++.|.+||++.++|++++|+++|++.+++.+...+..++..++.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~ 141 (529)
T TIGR02868 62 FGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVG 141 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666677777778888899999999999999999999999999999999999999999999888888888888888
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHH
Q 000511 1024 LGIAVVLSYVQVFFLLLLVPFWFIY-SKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1102 (1455)
Q Consensus 1024 l~~~~~~~~~~~~~~l~~~p~~~~~-~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~ 1102 (1455)
++.++++++.+|.+.++++..+.++ .....++.+..++..+...+..+.+.+++.|+++|+++||+|++|+.+.+++.+
T Consensus 142 ~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~ 221 (529)
T TIGR02868 142 SAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEA 221 (529)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHH
Confidence 8888888888887766554443332 223334444444444444566678899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1103 HVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTET 1182 (1455)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~ 1182 (1455)
..++..+..........+......++..+...++.++... ....+..+.|.+...+.++..+..++..+...+.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~ 297 (529)
T TIGR02868 222 ADRELLAAERRAARATGLGAAAQLLAAGLAVLGALWAGGP----AVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQAL 297 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887776655554444433333333222111111110 001244678888888888889999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCccccccCC-CCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHH
Q 000511 1183 EKEMVSLERVLEYMDVPQEELCGYQ-SLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSS 1261 (1455)
Q Consensus 1183 e~~~~s~~Ri~~~~~~~~e~~~~~~-~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKST 1261 (1455)
.+...+.+|+.++++.++|...... .+...+|..+.|+|+||+|+|+++ +++|+|+||+|+|||++||||||||||||
T Consensus 298 ~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~-~~vL~~isl~i~~G~~vaIvG~SGsGKST 376 (529)
T TIGR02868 298 TRVRAAAERIEEVTGAKGPRPEGVVPAAGALGLGKPTLELRDLSFGYPGS-PPVLDGVSLDLPPGERVAILGPSGSGKST 376 (529)
T ss_pred HHHHHHHHHHHHHhcCCCCcCCCCCCCCcccCCCCceEEEEEEEEecCCC-CceeecceEEEcCCCEEEEECCCCCCHHH
Confidence 9999999999999987765322111 111124456789999999999754 46999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHh
Q 000511 1262 ILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEA 1340 (1455)
Q Consensus 1262 Ll~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~-~~~d~ei~~aL~~~~l~~~i~~ 1340 (1455)
|+++|+|+|+|++|+|.+||+|++++ .+++|++++||||||++|+|||||||.+++ ..+|+++++|++.+++++++++
T Consensus 377 Ll~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~ 455 (529)
T TIGR02868 377 LLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRS 455 (529)
T ss_pred HHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHh
Confidence 99999999999999999999999999 999999999999999999999999999875 4689999999999999999999
Q ss_pred C--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccCh
Q 000511 1341 V--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRI 1412 (1455)
Q Consensus 1341 l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl 1412 (1455)
+ |+||.+||+|.+||||||||+|||||++++|+|||||||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 456 lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 456 LPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred CcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 8 99999999999999999999999999999999999999999999999999999999988999999999995
No 32
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.9e-70 Score=632.13 Aligned_cols=505 Identities=23% Similarity=0.368 Sum_probs=396.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHH
Q 000511 935 SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILN 1014 (1455)
Q Consensus 935 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~ 1014 (1455)
..-+..|.+..+...++..++.+.+.+...++-+....+.+++.+...+++|.+..+|.+.+...+-...|...+...+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 34567788899999999999999999999999999999999999999999999999999888877777666665555554
Q ss_pred HHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHh
Q 000511 1015 ILLANFVGLLGIAVVLSY-VQVFFLLLLVPFWFIYSKL----QFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRA 1089 (1455)
Q Consensus 1015 ~~~~~~~~~l~~~~~~~~-~~~~~~l~~~p~~~~~~~i----~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIra 1089 (1455)
.++..++.+......+.+ ..+.++++.+.....|..+ .++-.+-.+++.+.+ ...-....|++.+-.+||+
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Ad----n~as~~~~dsL~Nye~VKs 229 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNAD----NSASRRAYDSLINYEIVKS 229 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhh----hHHHHHHHHHHhhHHHHHH
Confidence 444444333333222222 2333333333333333221 111112222333333 3333567899999999999
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHH
Q 000511 1090 FKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIV 1169 (1455)
Q Consensus 1090 f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~ 1169 (1455)
||.|++..++|+..+..+.+......+....+.+.-..+.+. ..+.+.+.+..+ ...+.++.|......+...++.
T Consensus 230 fNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv---~~~~im~l~~~g-i~~~~mtvgdlv~~n~l~~qL~ 305 (591)
T KOG0057|consen 230 FNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSV---ALTFIMVLGSNG-IAAGKMTVGDLVMVNSLLFQLS 305 (591)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHH---HHHHHHHHHhhh-hhhccccccchhhHHHHHHHHH
Confidence 999999999999999998887765544333333222222221 112222222222 2234566777777888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEE
Q 000511 1170 SLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQV 1249 (1455)
Q Consensus 1170 ~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~Gekv 1249 (1455)
.+++.+-..+.++-.++.-.+-++...+.... .... +.+.-..+|.|+|+||+|.|.|+ +++|+++||+|++||||
T Consensus 306 ~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~--i~~~-~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekV 381 (591)
T KOG0057|consen 306 LPLNFLGSVYRELRQALTDMRTLFILLEVDED--IQEA-ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKV 381 (591)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhh--hhhc-cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEE
Confidence 88998888888888777776665544322111 1111 12222346789999999999865 56999999999999999
Q ss_pred EEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCC-CChHHHHHH
Q 000511 1250 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSV 1328 (1455)
Q Consensus 1250 gIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~-~~d~ei~~a 1328 (1455)
||||+|||||||++++|+|+++ ++|+|+|||+||++++++.+|+.||+||||..||++||-+||.+++. .+|||+.++
T Consensus 382 aIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~ 460 (591)
T KOG0057|consen 382 AIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEA 460 (591)
T ss_pred EEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHH
Confidence 9999999999999999999999 99999999999999999999999999999999999999999998875 589999999
Q ss_pred HHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEE
Q 000511 1329 LEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVI 1406 (1455)
Q Consensus 1329 L~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI 1406 (1455)
+++++++|.+.++ |++|.|||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|.+...++|+|
T Consensus 461 ~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI 540 (591)
T KOG0057|consen 461 CKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVI 540 (591)
T ss_pred HHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEE
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999999988999999
Q ss_pred EeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhh
Q 000511 1407 TIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1407 ~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
+|+||++++++||+|++||+|+|+|.|+|+||++ +++.|+.+|..+
T Consensus 541 ~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 541 MIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQ 586 (591)
T ss_pred EEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccc
Confidence 9999999999999999999999999999999999 677888888653
No 33
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.3e-69 Score=690.34 Aligned_cols=534 Identities=19% Similarity=0.188 Sum_probs=419.6
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 266 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-GSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1455)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 344 (1455)
++...+.+++.++...++.++..++..++|++++.++|.+.. +.+....+.++++++++.++..++.....+...+.+.
T Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (588)
T PRK11174 13 LKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAGQ 92 (588)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667788888888999999999999999999999997642 2222223344555666677788888888888899999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHHHHhHHHHHHH
Q 000511 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY---LLYTQVKFAFVSG 420 (1455)
Q Consensus 345 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~---lL~~~lg~a~l~g 420 (1455)
++...+...+|+|.++++...+.+.++|++.|.++.|++++.+... .+..++...+.++++++ .+.+.+++.+++
T Consensus 93 ~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~- 171 (588)
T PRK11174 93 HIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLG- 171 (588)
T ss_pred HHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999998889999999999999999998654 45555555444433333 233333333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHH----HHHHHHHHHHHHHHH
Q 000511 421 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMK----TRSSEVKHLSTRKYL 496 (1455)
Q Consensus 421 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~----~R~~El~~~~~~~~~ 496 (1455)
++++...+..++.++.++..++.++..++..+.+.|.++|+++||.|++|+.+.+++++ .|+.+.+..+.....
T Consensus 172 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 172 --TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333344556778888889999999999999999999999999999999988877744 444444433332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHh---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 497 DAWCVFFWATTPTLFSLFTFGLFALMGHQLDAA---------MVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTR 567 (1455)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~L~~~---------~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~ 567 (1455)
......+... .. +.++.++.+.+. +.++.| .+|+++.+...+..|+..++..+..+.++.++.+||.+
T Consensus 250 ~~~~~~~~~~-~~-~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ 326 (588)
T PRK11174 250 SAVLEFFASI-SI-ALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVT 326 (588)
T ss_pred HHHHHHHHHH-HH-HHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222211 11 122233333333 334443 45666677788899999999999999999999999999
Q ss_pred HhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHH
Q 000511 568 FLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKS 647 (1455)
Q Consensus 568 fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKS 647 (1455)
+++.++.++.... ...+ ......|+++|++|.|+++ + ++|+|+||+++||+.++|+||||||||
T Consensus 327 ~l~~~~~~~~~~~-~~~~----------~~~~~~i~~~~vsf~~~~~--~---~vL~~i~l~i~~G~~vaIvG~SGsGKS 390 (588)
T PRK11174 327 FLETPLAHPQQGE-KELA----------SNDPVTIEAEDLEILSPDG--K---TLAGPLNFTLPAGQRIALVGPSGAGKT 390 (588)
T ss_pred HHcCCCcccCCCc-cccC----------CCCCceEEEEeeEEeccCC--C---eeeeeeEEEEcCCCEEEEECCCCCCHH
Confidence 9976543211000 0000 0123469999999987642 2 359999999999999999999999999
Q ss_pred HHHHHHhcCccCCCcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHh
Q 000511 648 SLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDIS 713 (1455)
Q Consensus 648 tll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~ 713 (1455)
||+++|+|++ |++|+|.++| +|+||||+||||++||||||.+|++ .+++++.++++.|+++++++
T Consensus 391 TL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~ 469 (588)
T PRK11174 391 SLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLP 469 (588)
T ss_pred HHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHH
Confidence 9999999999 8999999987 5999999999999999999999964 89999999999999999999
Q ss_pred hccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccc
Q 000511 714 LMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI 793 (1455)
Q Consensus 714 ~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l 793 (1455)
.+|+|++|.+||+|.+|||||||||+||||++++|+|+||||||||||++++++|.+. +.. +.+++|+|+||||++.+
T Consensus 470 ~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~-l~~-~~~~~TvIiItHrl~~i 547 (588)
T PRK11174 470 LLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQA-LNA-ASRRQTTLMVTHQLEDL 547 (588)
T ss_pred hcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-HhCCCEEEEEecChHHH
Confidence 9999999999999999999999999999999999999999999999999999999886 444 55789999999999999
Q ss_pred ccCCEEEEEeCCeEEEecCHHHHHhccccCc
Q 000511 794 SAADMVVVMDKGQVKWIGSSADLAVSLYSGF 824 (1455)
Q Consensus 794 ~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~ 824 (1455)
+.||+|++|++|+++++|+|+|++++.+.+.
T Consensus 548 ~~aD~Iivl~~G~i~e~G~~~eL~~~~~~y~ 578 (588)
T PRK11174 548 AQWDQIWVMQDGQIVQQGDYAELSQAGGLFA 578 (588)
T ss_pred HhCCEEEEEeCCeEeecCCHHHHHhcchHHH
Confidence 9999999999999999999999987655443
No 34
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.2e-69 Score=687.63 Aligned_cols=509 Identities=21% Similarity=0.279 Sum_probs=412.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHH
Q 000511 936 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNI 1015 (1455)
Q Consensus 936 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~ 1015 (1455)
.|+++++++.++..++.++..+.....+.+...+++.++++++++.|+++|++.++|++++|+++|++.+.......+..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~ 116 (569)
T PRK10789 37 MWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLT 116 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34555555555666667777777777889999999999999999999999999999999999999999998666666666
Q ss_pred HHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHH
Q 000511 1016 LLANFVGLLGIAVVL-SYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSED 1094 (1455)
Q Consensus 1016 ~~~~~~~~l~~~~~~-~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~ 1094 (1455)
++..++..++.++++ .+.+|.+.++++..+.+...+.+.+.+..++..+......+.+.+.+.|+++|+++||+|++|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~ 196 (569)
T PRK10789 117 LVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLED 196 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccH
Confidence 666554444444443 3556655544433333333344444444444444445566778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 000511 1095 YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIAT-MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLG 1173 (1455)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~ 1173 (1455)
.+.+++.+..++..+..+.......+..........+...++.. ..... ..+..+.|.+..+..|...+..++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv-----~~g~lt~g~l~a~~~~~~~~~~pl~ 271 (569)
T PRK10789 197 RQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMV-----VNGSLTLGQLTSFVMYLGLMIWPML 271 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999888877776655444443333323222211111111 11111 1345678888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEEC
Q 000511 1174 NFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVG 1253 (1455)
Q Consensus 1174 ~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvG 1253 (1455)
.+...+.++.....+.+|+.++.+.+++........+ +.++.|+|+||+|+|+++.+++|+|+||+|+|||++||+|
T Consensus 272 ~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~~~---~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG 348 (569)
T PRK10789 272 ALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEPVP---EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICG 348 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCC---CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEEC
Confidence 9999999999999999999999987654322111111 2356899999999998655679999999999999999999
Q ss_pred CCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCC-CCChHHHHHHHHHh
Q 000511 1254 RTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKC 1332 (1455)
Q Consensus 1254 rtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~-~~~d~ei~~aL~~~ 1332 (1455)
+||||||||+++|.|+++|++|+|.+||+|+++++.+++|+++++|||+|++|+||+||||.++. ..+|++++++++.+
T Consensus 349 ~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~ 428 (569)
T PRK10789 349 PTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLA 428 (569)
T ss_pred CCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999998874 46899999999999
Q ss_pred cHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEecc
Q 000511 1333 HVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAH 1410 (1455)
Q Consensus 1333 ~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaH 1410 (1455)
++++++.++ |+||.++++|.+||||||||++||||++++|+|||||||||+||+++++.+++.|++..+++|+|+|||
T Consensus 429 ~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH 508 (569)
T PRK10789 429 SVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAH 508 (569)
T ss_pred CCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 999999988 999999999999999999999999999999999999999999999999999999998878999999999
Q ss_pred ChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhh
Q 000511 1411 RISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1411 rl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
|++++..||+|++|++|+++|.|+|++|++++ +.|++|++.+
T Consensus 509 ~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~y~~l~~~~ 550 (569)
T PRK10789 509 RLSALTEASEILVMQHGHIAQRGNHDQLAQQS-GWYRDMYRYQ 550 (569)
T ss_pred chhHHHcCCEEEEEeCCEEEEecCHHHHHHcC-ChHHHHHHHh
Confidence 99999999999999999999999999999865 6999998743
No 35
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=9.7e-69 Score=680.05 Aligned_cols=542 Identities=22% Similarity=0.295 Sum_probs=427.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000511 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 981 (1455)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 981 (1455)
++.++..++....++.+++.+|..... .....++..++++.++..+..++..........+...++++++++++++.
T Consensus 26 ~~~~~~~~~~~~~p~~~~~iid~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~l 102 (585)
T TIGR01192 26 IANITLAAITIAEPILFGRIIDAISSK---SDVLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRATLLTEAFGRIISM 102 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 444555556666666666655532111 11112222233333333333444444444555566666777999999999
Q ss_pred cccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 982 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1061 (1455)
Q Consensus 982 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~ 1061 (1455)
|++||+++++|++++|+++|++.+...+...+..++..++.+++.++++.+.+|.++++++.+.+++..+.+.+.+..++
T Consensus 103 ~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~ 182 (585)
T TIGR01192 103 PLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQRTKN 182 (585)
T ss_pred CHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988777777776666666666666777778877766655555556666666666666
Q ss_pred HHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1062 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1141 (1455)
Q Consensus 1062 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1141 (1455)
..+......+.+.+++.|+++|+++||+|+.++.+.+++.+..+...+..+.......+......++..+...++.++..
T Consensus 183 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~ 262 (585)
T TIGR01192 183 GQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCILVIGT 262 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677788899999999999999999999999999998888777666554443333333222222221111111111
Q ss_pred HhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCC-CCCccEE
Q 000511 1142 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW-PFQGLIE 1220 (1455)
Q Consensus 1142 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~w-p~~g~I~ 1220 (1455)
.. ...+..+.|.+..++.++..+..++..+...+.++.....+.+|+.++.+.+++...... + ..+ +..+.|+
T Consensus 263 ~~----v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-~-~~~~~~~~~i~ 336 (585)
T TIGR01192 263 VL----VIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-A-PELPNVKGAVE 336 (585)
T ss_pred HH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc-C-CCCCCCCCeEE
Confidence 00 013456788888888899999999999999999999999999999999876554321111 1 112 2356899
Q ss_pred EEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEe
Q 000511 1221 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP 1300 (1455)
Q Consensus 1221 f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~Vp 1300 (1455)
|+||+|+|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+|+.+++.+++|+++++||
T Consensus 337 ~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~ 415 (585)
T TIGR01192 337 FRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVF 415 (585)
T ss_pred EEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEc
Confidence 99999999753 46999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000511 1301 QSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1377 (1455)
Q Consensus 1301 Qdp~lf~gTIreNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlL 1377 (1455)
|||.+|++|+||||.++. ..+|++++++++.+++++++.++ |+||.++++|.+||||||||++||||++++|+||||
T Consensus 416 q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ilil 495 (585)
T TIGR01192 416 QDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILVL 495 (585)
T ss_pred cCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999998874 45889999999999999999888 999999999999999999999999999999999999
Q ss_pred eccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhhC
Q 000511 1378 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1454 (1455)
Q Consensus 1378 DEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~g 1454 (1455)
|||||+||.++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++. +.|+++++.+.
T Consensus 496 DEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~y~~l~~~~~ 571 (585)
T TIGR01192 496 DEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKD-GRFYKLLRRSG 571 (585)
T ss_pred ECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCC-ChHHHHHHhCc
Confidence 99999999999999999999888899999999999999999999999999999999999999865 69999998653
No 36
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.1e-68 Score=675.86 Aligned_cols=515 Identities=22% Similarity=0.284 Sum_probs=410.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccC-CCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000511 902 LSAILMQASRNGNDLWLSYWVDTTG-SSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 980 (1455)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 980 (1455)
++.++..++....++.+++..|... ..........+++.++++.++..++.+++.+.....+.+...+++.++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~ 89 (529)
T TIGR02857 10 LLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVAA 89 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444555555555555555321 111111223445556666777778888888888999999999999999999999
Q ss_pred CcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 981 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1060 (1455)
Q Consensus 981 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr 1060 (1455)
.|..+|++.++|++++|+++|++.+++.+...+..++..++.+++.++++.+.+|+++++++...++...+...+.+..+
T Consensus 90 ~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~ 169 (529)
T TIGR02857 90 LGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAAQ 169 (529)
T ss_pred CCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888777777777777777667777777776554433332222222222333333
Q ss_pred HHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000511 1061 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIA-TM 1139 (1455)
Q Consensus 1061 ~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~-~~ 1139 (1455)
...+......+.+.+++.|+++|+++||+|+.|+.+.+++.+..++..+..........+.....+++..+...++. +.
T Consensus 170 ~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (529)
T TIGR02857 170 AAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVYI 249 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344556678899999999999999999999999999988888777766666666655555554443222211 11
Q ss_pred HHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccE
Q 000511 1140 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLI 1219 (1455)
Q Consensus 1140 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I 1219 (1455)
..... .+..+.|.+..++.++..+..++..+...+.++.....+.+|+.++++.++++.... +...+..+.|
T Consensus 250 ~~~~~-----~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~~~~~~~i 321 (529)
T TIGR02857 250 GFRLL-----AGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVTAAPAPSL 321 (529)
T ss_pred HHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCCCCCCCeE
Confidence 11111 234577888888888889999999999999999999999999999998554322111 1112234689
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000511 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1455)
Q Consensus 1220 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~V 1299 (1455)
+|+||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++||
T Consensus 322 ~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v 401 (529)
T TIGR02857 322 EFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWV 401 (529)
T ss_pred EEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEE
Confidence 99999999986556799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCcHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000511 1300 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1376 (1455)
Q Consensus 1300 pQdp~lf~gTIreNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILl 1376 (1455)
||||++|+|||||||.++. ..+|++++++++.++++++++++ ||||.++|+|.+||||||||++||||++++|+|+|
T Consensus 402 ~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ili 481 (529)
T TIGR02857 402 PQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLL 481 (529)
T ss_pred cCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998865 46889999999999999999999 99999999999999999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEE
Q 000511 1377 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILIL 1424 (1455)
Q Consensus 1377 LDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl 1424 (1455)
||||||+||++|++.|++.|++..+++|+|+||||+++++.||+|+||
T Consensus 482 lDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 482 LDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred EeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999888899999999999999999999986
No 37
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2e-67 Score=682.66 Aligned_cols=537 Identities=21% Similarity=0.253 Sum_probs=443.0
Q ss_pred chHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 264 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 343 (1455)
Q Consensus 264 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 343 (1455)
.+++..++.+++.++...++.++..++.++.|++++.++|.+....+....+.++++++++.++..++.....+...+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLE 204 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566778888888999999999999999999999998764333344455566667777778888888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000511 344 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 421 (1455)
Q Consensus 344 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~ 421 (1455)
.++...+...+|+|.++++...+++.+.|++++.++ |++.+.+.... +..+...++-++. +++++..-++.+++.+
T Consensus 205 ~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l 282 (686)
T TIGR03797 205 TRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLN-LGLMFYYSWKLALVAV 282 (686)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999999999999999888899999999987 78888775432 2333444444333 3333333333444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 422 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 501 (1455)
Q Consensus 422 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 501 (1455)
+++++.+.+..++.+++.+..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++++..++..+...+......+..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (686)
T TIGR03797 283 ALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLT 362 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555677788888899999999999999999999999999999999999988888877666666666555555444
Q ss_pred HHHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhh
Q 000511 502 FFWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 579 (1455)
Q Consensus 502 ~~~~~~~~--~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 579 (1455)
.+...... .+.++++|+|.+.++.+|.|.++++.+++..+..|+..++..+..+.++.++++|+.++++.++..+..
T Consensus 363 ~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~- 441 (686)
T TIGR03797 363 VFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA- 441 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC-
Confidence 43333222 233456778888889999999999999999999999999999999999999999999999765422110
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC
Q 000511 580 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 659 (1455)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~ 659 (1455)
. ..+ ......|+++|++|+|++++ +++|+|+||+|++||.++|+|+||||||||+++|+|+++|
T Consensus 442 ~--~~~----------~~~~~~I~~~nvsf~Y~~~~----~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p 505 (686)
T TIGR03797 442 K--TDP----------GKLSGAIEVDRVTFRYRPDG----PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP 505 (686)
T ss_pred c--CCC----------CCCCceEEEEEEEEEcCCCC----ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 0 000 11234699999999997432 2359999999999999999999999999999999999999
Q ss_pred CCcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000511 660 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 726 (1455)
Q Consensus 660 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~ 726 (1455)
++|+|.++| .||||||+|++|++||||||.++++.++++..++++.|+++++++.+|+|++|.+||+
T Consensus 506 ~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 506 ESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred CCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 999999987 5999999999999999999999988899999999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCe
Q 000511 727 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1455)
Q Consensus 727 g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1455)
|.+|||||||||+||||++++|+|++||||||+||+++++++.+. +.. . ++|+|+||||++.++.||+|++|++|+
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~-L~~-~--~~T~IiItHr~~~i~~~D~Iivl~~G~ 661 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSES-LER-L--KVTRIVIAHRLSTIRNADRIYVLDAGR 661 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-h--CCeEEEEecChHHHHcCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999988 433 2 589999999999999999999999999
Q ss_pred EEEecCHHHHHhccccC
Q 000511 807 VKWIGSSADLAVSLYSG 823 (1455)
Q Consensus 807 i~~~g~~~~l~~~~~~~ 823 (1455)
|+++|+++|+.+..+.+
T Consensus 662 iv~~G~~~~Ll~~~~~y 678 (686)
T TIGR03797 662 VVQQGTYDELMAREGLF 678 (686)
T ss_pred EEEECCHHHHHhCCcHH
Confidence 99999999998765443
No 38
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.9e-67 Score=684.26 Aligned_cols=544 Identities=20% Similarity=0.210 Sum_probs=445.4
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 266 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLK 345 (1455)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 345 (1455)
++..++.+++.++..++..++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++.+
T Consensus 145 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (710)
T TIGR03796 145 LWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIK 224 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666777788888899999999999999999999876533333344556666667777888888888899999999
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000511 346 LRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAIT 424 (1455)
Q Consensus 346 ~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~ 424 (1455)
+...+...+|+|.++++...+.+.++|++++.++.| +.+.++.. .+..+....+.+++.+++++..-++.+++.++.+
T Consensus 225 ~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 303 (710)
T TIGR03796 225 LAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFA 303 (710)
T ss_pred HHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988889999999999888 56776543 3444444444444444444443334444444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 425 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 504 (1455)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 504 (1455)
++.+.+..++.++..+..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++.+.++.+...+......+...+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (710)
T TIGR03796 304 AINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLP 383 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556677788888888999999999999999999999999999999999999999988888887776666555544333
Q ss_pred HHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhc
Q 000511 505 ATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 582 (1455)
Q Consensus 505 ~~~~~--~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 582 (1455)
..... .+.++++|+|.+.++.+|.|.++++.++++.+..|+..++..+..+.++..+++|+.++++.++..+.....
T Consensus 384 ~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~- 462 (710)
T TIGR03796 384 TLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEE- 462 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc-
Confidence 32222 234567788888889999999999999999999999999999999999999999999999765432211000
Q ss_pred CCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCc
Q 000511 583 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 662 (1455)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G 662 (1455)
.... ...........++++|++|+|+..+ +++|+|+||+|++||.++|+||||||||||+++|+|+++|++|
T Consensus 463 ~~~~----~~~~~~~~~~~I~~~~vsf~y~~~~----~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 534 (710)
T TIGR03796 463 APAA----GSEPSPRLSGYVELRNITFGYSPLE----PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSG 534 (710)
T ss_pred cccc----ccccCCCCCCeEEEEEEEEecCCCC----CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 0000 0000011235799999999997532 2359999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCC-CCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000511 663 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1455)
Q Consensus 663 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~ 728 (1455)
+|.++| .|+||||+|++|++||||||.++. +.+++++.++++.++++++++.+|+|++|.+||+|.
T Consensus 535 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~ 614 (710)
T TIGR03796 535 EILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGA 614 (710)
T ss_pred EEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCC
Confidence 999986 599999999999999999999875 578999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEE
Q 000511 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1455)
Q Consensus 729 ~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1455)
+|||||||||+||||++++|+|+|||||||+||+++++++++.+ .. .++|+|+||||++.++.||+|++|++|+++
T Consensus 615 ~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l-~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~ 690 (710)
T TIGR03796 615 NLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNL-RR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVV 690 (710)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHH-Hh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999984 32 479999999999999999999999999999
Q ss_pred EecCHHHHHhccccC
Q 000511 809 WIGSSADLAVSLYSG 823 (1455)
Q Consensus 809 ~~g~~~~l~~~~~~~ 823 (1455)
++|+++|+++..+.+
T Consensus 691 ~~G~~~~Ll~~~~~y 705 (710)
T TIGR03796 691 QRGTHEELWAVGGAY 705 (710)
T ss_pred EecCHHHHHHcCCcH
Confidence 999999998765443
No 39
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.1e-66 Score=676.47 Aligned_cols=535 Identities=21% Similarity=0.288 Sum_probs=444.8
Q ss_pred hHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 265 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1455)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 344 (1455)
.++..++.+++.+....++.++..++.++.|++++.++|.+....+....+.++++++++.++.+++.....+...+++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGK 216 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677888888888899999999999999999999987543333344445555666677778888888888999999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000511 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGLA 422 (1455)
Q Consensus 345 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~ 422 (1455)
++...+...+|+|.++++... .+.++|++++.+ .|++.+.+.... +..+...++.++..+++++. -++.+++.++
T Consensus 217 ~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~l~li~l~ 293 (694)
T TIGR03375 217 KADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAII-GGPLVWVPLV 293 (694)
T ss_pred HHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHH
Confidence 999999999999999999877 677899999998 799999986542 33344444444443334333 3334444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 423 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 502 (1455)
Q Consensus 423 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 502 (1455)
++++.+.+..++.+++.+..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..++..+...+..........
T Consensus 294 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (694)
T TIGR03375 294 AIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATN 373 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556667778889999999999999999999999999999999999999999999999888777777776666655444
Q ss_pred HHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhh
Q 000511 503 FWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 580 (1455)
Q Consensus 503 ~~~~~~~--~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 580 (1455)
+...... .+.++++|+|.+.++.+|+|.+++++.++..+..|+..++..+..+.++.++++|+.++++.++..+....
T Consensus 374 ~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~ 453 (694)
T TIGR03375 374 FAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTR 453 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 3333322 23356778888888999999999999999999999999999999999999999999999987543211000
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000511 581 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 660 (1455)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~ 660 (1455)
... .......|+++|++|+|+.. + +++|+|+||+|++||.++|+|+||||||||+++|+|+++|+
T Consensus 454 ---~~~--------~~~~~~~I~~~~vsf~Y~~~-~---~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~ 518 (694)
T TIGR03375 454 ---FLH--------RPRLQGEIEFRNVSFAYPGQ-E---TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT 518 (694)
T ss_pred ---CCC--------CCCccceEEEEEEEEEeCCC-C---ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 000 01123579999999999643 1 23599999999999999999999999999999999999999
Q ss_pred CcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000511 661 HGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 726 (1455)
Q Consensus 661 ~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~ 726 (1455)
+|+|.++| .|+||+|+|++|++||+|||.++++ .+++++.++++.|+++++++.+|+|++|.+||+
T Consensus 519 ~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 519 EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred CceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 99999987 6999999999999999999999976 889999999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCe
Q 000511 727 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1455)
Q Consensus 727 g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1455)
|.+||||||||++||||++++|+|++||||||+||+++++.+.+. +.. ..+++|+|+||||++.++.||+|++|++|+
T Consensus 599 G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~-l~~-~~~~~T~iiItHrl~~~~~~D~iivl~~G~ 676 (694)
T TIGR03375 599 GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDR-LKR-WLAGKTLVLVTHRTSLLDLVDRIIVMDNGR 676 (694)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHH-HhCCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999887 443 456899999999999999999999999999
Q ss_pred EEEecCHHHHHhc
Q 000511 807 VKWIGSSADLAVS 819 (1455)
Q Consensus 807 i~~~g~~~~l~~~ 819 (1455)
++++|+|+|+++.
T Consensus 677 i~e~G~~~eLl~~ 689 (694)
T TIGR03375 677 IVADGPKDQVLEA 689 (694)
T ss_pred EEeeCCHHHHHHH
Confidence 9999999999754
No 40
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.2e-66 Score=671.87 Aligned_cols=535 Identities=19% Similarity=0.191 Sum_probs=422.8
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 270 CCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSS 349 (1455)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 349 (1455)
++.+++.++...++.++..++..+.|++++.++|.+....+.......+..++++.++..++.....+...+.+.++...
T Consensus 156 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 235 (711)
T TIGR00958 156 SGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLR 235 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556667777888999999999999999999998865322222222233344445555666655666667777888888
Q ss_pred HHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000511 350 IMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLI 428 (1455)
Q Consensus 350 L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~ 428 (1455)
+...+|+|.++.+...+++.++|++.|.++.|++.+.+... .+..++...+.+++++++++..-...+++.++.+++..
T Consensus 236 lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~ 315 (711)
T TIGR00958 236 IREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVF 315 (711)
T ss_pred HHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 88999999999999888888999999999999999987543 45555555555554444333322222233333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000511 429 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATT- 507 (1455)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~- 507 (1455)
.+..++.++..+..++.++..++..+...|.++|+++||.|++|+.+.+++++..++-.+...+.....+.........
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (711)
T TIGR00958 316 LAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLG 395 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777888888888899999999999999999999999999998877777665444443333333222222221111
Q ss_pred -HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCC
Q 000511 508 -PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 586 (1455)
Q Consensus 508 -~~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~ 586 (1455)
...+.++.+|.|.+.++.++++.+++++.+...+..|+..++..+..+.++.++.+||.+|++.++..+.... ..+
T Consensus 396 ~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~- 472 (711)
T TIGR00958 396 MLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGT--LAP- 472 (711)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CCC-
Confidence 1223445677888888999999999999999999999999999999999999999999999976543221000 000
Q ss_pred cccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEE
Q 000511 587 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 666 (1455)
Q Consensus 587 ~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~ 666 (1455)
.+....|+++|++|+|+.+++ +++|+|+||+++|||.++|+||||||||||+++|+|+++|++|+|.+
T Consensus 473 ---------~~~~~~I~~~nVsf~Y~~~~~---~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 540 (711)
T TIGR00958 473 ---------LNLEGLIEFQDVSFSYPNRPD---VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLL 540 (711)
T ss_pred ---------CCCCCeEEEEEEEEECCCCCC---CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 112356999999999975422 34699999999999999999999999999999999999999999999
Q ss_pred cC-------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000511 667 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 667 ~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSG 732 (1455)
+| +|+||+|+|++|++||||||.+|.+ .++++..++++.++++++++.+|+|++|.+||+|.+|||
T Consensus 541 dg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 541 DGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 87 5999999999999999999999964 678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecC
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 812 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 812 (1455)
|||||++||||++++|+|+|||||||+||+++++.+.+. . ..+++|+|+||||++.++.||+|++|++|+|+++|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~~-~---~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt 696 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQES-R---SRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGT 696 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHHh-h---ccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeC
Confidence 999999999999999999999999999999999988872 2 346899999999999999999999999999999999
Q ss_pred HHHHHhccccC
Q 000511 813 SADLAVSLYSG 823 (1455)
Q Consensus 813 ~~~l~~~~~~~ 823 (1455)
|+|++++.+.+
T Consensus 697 ~~eL~~~~~~y 707 (711)
T TIGR00958 697 HKQLMEDQGCY 707 (711)
T ss_pred HHHHHhCCCch
Confidence 99998765443
No 41
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.3e-66 Score=657.61 Aligned_cols=523 Identities=19% Similarity=0.217 Sum_probs=405.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000511 903 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 982 (1455)
Q Consensus 903 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p 982 (1455)
+.++........++.++...|.............++.+++++.++..++.+++.+.....+.+....++.++++++++.|
T Consensus 14 ~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~ 93 (544)
T TIGR01842 14 FSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFSAT 93 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 33444445555566666555532111111122334455555666677778888888888999999999999999999999
Q ss_pred ccccccCChhhHHHHHHhhhhhhhcchhH-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 983 VLFFDQTPGGRILNRFSSDLYMIDDSLPF-ILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1061 (1455)
Q Consensus 983 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~-~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~ 1061 (1455)
+.. .+...+++++|++.+.+.+.. .+..++..++.++. ++++++.+|++.++++...+++..+..+..+..+.
T Consensus 94 ~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~~~ 167 (544)
T TIGR01842 94 LRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIY-LLVCFLLHPWIGILALGGAVVLVGLALLNNRATKK 167 (544)
T ss_pred ccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 842 356789999999999877655 34444444444333 34556666665544332222222233333333333
Q ss_pred HHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000511 1062 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIA-TMA 1140 (1455)
Q Consensus 1062 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~-~~~ 1140 (1455)
..+...+..+...+++.|+++|+++||+|+.|+.+.+++.+..++..+..+.......+......++..+...++. +..
T Consensus 168 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 247 (544)
T TIGR01842 168 PLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGLGA 247 (544)
T ss_pred HHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334455667778899999999999999999999999999988887776655444443333333332221111111 111
Q ss_pred HHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEE
Q 000511 1141 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIE 1220 (1455)
Q Consensus 1141 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~ 1220 (1455)
... ..+..++|.+..++.+...+..++..+...+.++.....+.+|+.++++.++|+.... .. -+..+.|+
T Consensus 248 ~l~-----~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~---~~~~~~i~ 318 (544)
T TIGR01842 248 YLA-----IDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM-PL---PEPEGHLS 318 (544)
T ss_pred HHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC-CC---CCCCCeEE
Confidence 111 1345678988888999999999999999999999999999999999998766532111 11 12356899
Q ss_pred EEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEe
Q 000511 1221 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP 1300 (1455)
Q Consensus 1221 f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~Vp 1300 (1455)
++||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|+++++||
T Consensus 319 ~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~ 398 (544)
T TIGR01842 319 VENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLP 398 (544)
T ss_pred EEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEec
Confidence 99999999765568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000511 1301 QSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1377 (1455)
Q Consensus 1301 Qdp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlL 1377 (1455)
|||++|++|+|||+.++++ .+|++++++++.++++++++++ |+||.++++|.+||||||||++||||++++|+||||
T Consensus 399 q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ilil 478 (544)
T TIGR01842 399 QDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVL 478 (544)
T ss_pred CCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999999986654 7899999999999999999999 999999999999999999999999999999999999
Q ss_pred eccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhc
Q 000511 1378 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1378 DEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
|||||+||.++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||++
T Consensus 479 DEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 479 DEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred eCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999998875 6899999999999999999999999999999999999976
No 42
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=8.2e-67 Score=709.26 Aligned_cols=555 Identities=19% Similarity=0.255 Sum_probs=431.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 894 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 973 (1455)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 973 (1455)
+..+++.+++.++..++....++.+...++... .......++..+++++++..++.+++.+++.+.+.+...+++.+
T Consensus 59 ~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~ 135 (1466)
T PTZ00265 59 RKLLGVSFVCATISGGTLPFFVSVFGVIMKNMN---LGENVNDIIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLE 135 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333344444444444444555555554321 11123345556667777788888999999999999999999999
Q ss_pred HHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 974 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1053 (1455)
Q Consensus 974 ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~ 1053 (1455)
++++++++|++|||..+.|++.+|++.|++.+...+...+..++..++.+++.++++++.+|.++++++.++.+++.+..
T Consensus 136 ~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~ 215 (1466)
T PTZ00265 136 FLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGV 215 (1466)
T ss_pred HHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988899999988888888888888888776655544444444444
Q ss_pred HHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1054 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1133 (1455)
Q Consensus 1054 ~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 1133 (1455)
.+.+..+...+......+...+.+.|+++|++|||+|+.|+.+.++|.+..+...+..+.......+......++..+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 295 (1466)
T PTZ00265 216 ICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASY 295 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444555555555678899999999999999999999999999988888777766554444332222222221111
Q ss_pred HHH---HHHHHHhhc-CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCC
Q 000511 1134 SFI---ATMAVIGSR-GNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSL 1209 (1455)
Q Consensus 1134 ~~~---~~~~v~~~~-~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~ 1209 (1455)
.++ +...++... .....+..++|.+...+.+.+.....+..+...+..+..+..|.+|+.+.++.+++..... .
T Consensus 296 ~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~~--~ 373 (1466)
T PTZ00265 296 AFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVENND--D 373 (1466)
T ss_pred HHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC--C
Confidence 111 111111000 0000112345544444444444344456667788899999999999999998766532111 1
Q ss_pred CCCCCCCccEEEEEEEEEecCCC-CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEE-CCEeCCCC
Q 000511 1210 SPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV-DGLNIINT 1287 (1455)
Q Consensus 1210 ~~~wp~~g~I~f~nvs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~I-dG~di~~i 1287 (1455)
....|..+.|+|+||+|+|+... .++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|.+ ||.|++++
T Consensus 374 ~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~ 453 (1466)
T PTZ00265 374 GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDI 453 (1466)
T ss_pred CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhC
Confidence 11123345899999999997532 46999999999999999999999999999999999999999999999 67999999
Q ss_pred ChHHHhcccEEEeCCCCCCCCcHHHhcCcCC-------------------------------------------------
Q 000511 1288 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH------------------------------------------------- 1318 (1455)
Q Consensus 1288 ~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~------------------------------------------------- 1318 (1455)
+.+++|++|++|||+|.+|++||+|||.++.
T Consensus 454 ~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (1466)
T PTZ00265 454 NLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNE 533 (1466)
T ss_pred CHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcccccchhh
Confidence 9999999999999999999999999997642
Q ss_pred ---------CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHH
Q 000511 1319 ---------MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQ 1387 (1455)
Q Consensus 1319 ---------~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~ 1387 (1455)
..+|++++++++.++++++++.+ |+||.++++|.+||||||||++||||++++|+|||||||||+||++
T Consensus 534 ~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~ 613 (1466)
T PTZ00265 534 LIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNK 613 (1466)
T ss_pred hhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHH
Confidence 23678999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc--CCcEEEEeccChhhHhhhCEEEEEeCC--------------------------------------
Q 000511 1388 TASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHG-------------------------------------- 1427 (1455)
Q Consensus 1388 te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G-------------------------------------- 1427 (1455)
+++.|++.|++.. +++|+|+||||+++++.||+|+||++|
T Consensus 614 se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1466)
T PTZ00265 614 SEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNNN 693 (1466)
T ss_pred HHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccccccccccccccccccccccccc
Confidence 9999999999875 489999999999999999999999986
Q ss_pred ---------eEEEeCChhHHhccCCcHHHHHHHhh
Q 000511 1428 ---------HLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1428 ---------~ive~G~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
+|+|+|+|+||+++++|.|+.|++.+
T Consensus 694 ~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q 728 (1466)
T PTZ00265 694 NNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQ 728 (1466)
T ss_pred ccccccCCceeEeeCCHHHHHhccCCcHHHHHhhh
Confidence 59999999999986778999999765
No 43
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.6e-69 Score=600.78 Aligned_cols=487 Identities=25% Similarity=0.389 Sum_probs=396.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhH-HHHHHH
Q 000511 958 SFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVL-SYVQVF 1036 (1455)
Q Consensus 958 ~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~-~~~~~~ 1036 (1455)
++...+..+.+.+--+.|.++.+..+.|.-+..+|-+..-......-|+..+-..+.+.+..++-+....+++ ....||
T Consensus 5 ~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~ 84 (497)
T COG5265 5 LFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWW 84 (497)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccH
Confidence 4455566667777778888999999999888777765444444444444444444444444444433333322 234577
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1037 FLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1116 (1455)
Q Consensus 1037 ~~l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~ 1116 (1455)
++++.+..+++|.++......-.-..||.-..+.+..++.-.+++-+.+|+|.||.|+++..+|.+.++.++++......
T Consensus 85 f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~ 164 (497)
T COG5265 85 FALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHV 164 (497)
T ss_pred HHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHH
Confidence 77766666655554433222222233444455555666777899999999999999999999999999999999888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000511 1117 ASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1196 (1455)
Q Consensus 1117 ~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~ 1196 (1455)
.-.|+++.-..+..........+... ....+.++.|.+...-.+..+++.+++.+-..+.++.++....|+..+..
T Consensus 165 Sl~~Ln~gQ~~I~~~~l~~~m~~s~~----~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl 240 (497)
T COG5265 165 SLLVLNFGQTAIFSTGLRVMMTMSAL----GVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLL 240 (497)
T ss_pred HHHHHHHhhHHHHHHHHHHHHhhcHH----HHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhh
Confidence 77777765554433222211111111 11245677889999999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCC-CCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCc
Q 000511 1197 DVPQEELCGYQSLSPDWP-FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1275 (1455)
Q Consensus 1197 ~~~~e~~~~~~~~~~~wp-~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G 1275 (1455)
+.+.|....+ ..++-|| ..|.|.|+||+|.|.+. .|+|+|+||++++|+++||||++|+||||+..+|+|||++++|
T Consensus 241 ~~~~~v~d~p-da~~L~~~~~g~v~F~~V~F~y~~~-r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 241 DVEAEVSDAP-DAPPLWPVRLGAVAFINVSFAYDPR-RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred ccchhhccCC-CCccccccccceEEEEEEEeecccc-chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 8877653322 2344564 46899999999999876 4799999999999999999999999999999999999999999
Q ss_pred eEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCC
Q 000511 1276 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1352 (1455)
Q Consensus 1276 ~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~ 1352 (1455)
+|.|||.||.++..+.+|+.||+||||.+||+.|+..|+.++++ .+++|++.|++.+++.++++.+ |+||.|||.|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 99999999999999999999999999999999999999998875 5899999999999999999999 99999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEe
Q 000511 1353 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1432 (1455)
Q Consensus 1353 ~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1432 (1455)
.||||||||+++||++|++|+||+||||||+||..||+.||..|++..+++|.++|||||+||.++|.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHhccCCcHHHHHHH
Q 000511 1433 GNPQTLLQDECSVFSSFVR 1451 (1455)
Q Consensus 1433 G~p~eLl~~~~s~f~~l~~ 1451 (1455)
|+|+||+++ +|.|++||.
T Consensus 479 g~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred CcHHHHHHc-CChHHHHhc
Confidence 999999997 689999986
No 44
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=6.6e-68 Score=629.91 Aligned_cols=475 Identities=25% Similarity=0.379 Sum_probs=358.6
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC----CcEEEEcC--------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT----HGSIHASG-------- 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~----~G~i~~~~-------- 668 (1455)
.++++|.+..+.... .+ ..+++|+||++.+||.++|||.|||||||+.++|.|..++. +|+|.++|
T Consensus 5 lL~V~nL~v~~~~~~-~~-~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~ 82 (539)
T COG1123 5 LLEVENLTVEFATDG-GR-VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSE 82 (539)
T ss_pred eEEEeceEEEEecCC-cc-eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCH
Confidence 578999998887652 22 35799999999999999999999999999999999999887 89998776
Q ss_pred ---------cEEEEcCCCC-CCCc--CHHHHhc----cCCCC-CH---HHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000511 669 ---------SIAYVPQVPW-ILSG--TIRDNIL----FGKNY-DP---QSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1455)
Q Consensus 669 ---------~i~y~~Q~p~-l~~~--ti~~nI~----~g~~~-~~---~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~ 728 (1455)
.|||++|+|+ .+|. ||.+-|. ..... .+ ++..+.++..+|.+.... .....
T Consensus 83 ~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPh 153 (539)
T COG1123 83 REMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPH 153 (539)
T ss_pred HHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCc
Confidence 5999999997 5554 7776664 22222 12 233444555555433221 45677
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeE
Q 000511 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 807 (1455)
Q Consensus 729 ~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i 807 (1455)
.|||||||||.||+||..+|+++|+||||+|||+.+..+|++.+.......|.++|+|||++..+.+ ||+|+||.+|++
T Consensus 154 eLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~i 233 (539)
T COG1123 154 QLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEI 233 (539)
T ss_pred ccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEE
Confidence 9999999999999999999999999999999999999999987322213457799999999999876 999999999999
Q ss_pred EEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHH
Q 000511 808 KWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKN 887 (1455)
Q Consensus 808 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~ 887 (1455)
+|.|+.+++..+...- |
T Consensus 234 VE~G~~~~i~~~p~hp-------------------------------------------------------------Y-- 250 (539)
T COG1123 234 VETGPTEEILSNPQHP-------------------------------------------------------------Y-- 250 (539)
T ss_pred EEecCHHHHHhccCCc-------------------------------------------------------------c--
Confidence 9999999886432100 0
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 888 YAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAA 967 (1455)
Q Consensus 888 y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (1455)
-+. + |.. .+....
T Consensus 251 -T~~----------L------------------l~a-----~p~~~~--------------------------------- 263 (539)
T COG1123 251 -TRG----------L------------------LAA-----VPRLGD--------------------------------- 263 (539)
T ss_pred -cHH----------H------------------Hhh-----CCCccc---------------------------------
Confidence 000 0 000 000000
Q ss_pred HHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 000511 968 VKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFI 1047 (1455)
Q Consensus 968 ~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~ 1047 (1455)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1048 YSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQL 1127 (1455)
Q Consensus 1048 ~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~ 1127 (1455)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCC
Q 000511 1128 LAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQ 1207 (1455)
Q Consensus 1128 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~ 1207 (1455)
. ... ..+.+
T Consensus 264 -------------------~-~~~---------------------------------------------~~~~~------ 272 (539)
T COG1123 264 -------------------E-KII---------------------------------------------RLPRR------ 272 (539)
T ss_pred -------------------c-ccc---------------------------------------------ccccc------
Confidence 0 000 00000
Q ss_pred CCCCCCCCCccEEEEEEEEEecCC---------CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEE
Q 000511 1208 SLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1278 (1455)
Q Consensus 1208 ~~~~~wp~~g~I~f~nvs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~ 1278 (1455)
.+. +....++++|++.+|... ...+++||||++++||.+||||.||||||||.++|+|+.+|++|+|.
T Consensus 273 ~~~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~ 349 (539)
T COG1123 273 GPL---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSII 349 (539)
T ss_pred ccc---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE
Confidence 000 012358899999999741 24689999999999999999999999999999999999999999999
Q ss_pred ECCEe--CCCCChHHHhcccEEEeCCCCC--C-CCcHHHhcC-cCCCCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCC
Q 000511 1279 VDGLN--IINTPVRDLRGRFAVVPQSPFL--F-EGSLRDNLD-PFHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESG 1351 (1455)
Q Consensus 1279 IdG~d--i~~i~~~~lR~~i~~VpQdp~l--f-~gTIreNLd-p~~~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G 1351 (1455)
++|.| .+.-+...+|+++-+|.|||+- - ..||+++|. |...+.... .+-.+..+.+.++..||.. .++...
T Consensus 350 ~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~--~~~~~~rv~~ll~~VgL~~~~l~ryP 427 (539)
T COG1123 350 FDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGS--GAERRARVAELLELVGLPPEFLDRYP 427 (539)
T ss_pred EeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccc--hHHHHHHHHHHHHHcCCCHHHHhcCc
Confidence 99977 3433456688899999999973 2 359999984 322111100 1111112333333336665 356667
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCe
Q 000511 1352 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGH 1428 (1455)
Q Consensus 1352 ~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1428 (1455)
..||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|.+.-+ +.|.|+|||++..++. ||||+||++|+
T Consensus 428 ~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~ 507 (539)
T COG1123 428 HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGR 507 (539)
T ss_pred hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCe
Confidence 78999999999999999999999999999999999999999999876542 7999999999999987 99999999999
Q ss_pred EEEeCChhHHhccCCcHHHHHHHh
Q 000511 1429 LVEQGNPQTLLQDECSVFSSFVRA 1452 (1455)
Q Consensus 1429 ive~G~p~eLl~~~~s~f~~l~~~ 1452 (1455)
|||.|+.++..+++...|.+.+.+
T Consensus 508 iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 508 IVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred EEEeCCHHHHhcCCCChHHHHHHH
Confidence 999999999999988788776544
No 45
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=9.3e-66 Score=669.28 Aligned_cols=535 Identities=21% Similarity=0.249 Sum_probs=434.4
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 268 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 347 (1455)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r 347 (1455)
..++.+++.++...+..++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++.++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (708)
T TIGR01193 149 PLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQRLS 228 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777788888889999999999999999999987643333333445555666677778888888888899999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000511 348 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-F-HDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 425 (1455)
Q Consensus 348 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~-~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~ 425 (1455)
..+...+|+|.++++...+++.+.|++++.++ |.+.+.+.... + ..+...++.++..+++++....+ +++.+++++
T Consensus 229 ~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l-~li~l~~~~ 306 (708)
T TIGR01193 229 IDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLL-FLLSLLSIP 306 (708)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHH
Confidence 99999999999999999988899999999998 99988875432 2 22334444443333343333322 333333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 426 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 505 (1455)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 505 (1455)
+.+.+..++.+++++..++.++..+++.+...|.++|+++||.+|+|+.+.+++++..++..+...+..........+..
T Consensus 307 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (708)
T TIGR01193 307 VYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKA 386 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455677888888999999999999999999999999999999999999888877766555555544444333332222
Q ss_pred HHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcC
Q 000511 506 TTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 583 (1455)
Q Consensus 506 ~~~--~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 583 (1455)
... ..+.++++|+|.+.++.+|+|.++++.++...+..|+..+...+..+.+++++++|+.++++.++..+.... .
T Consensus 387 ~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~--~ 464 (708)
T TIGR01193 387 VTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKK--R 464 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccc--c
Confidence 221 223456788898899999999999999999999999999999999999999999999999976543221100 0
Q ss_pred CCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcE
Q 000511 584 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 663 (1455)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~ 663 (1455)
.+ .......|+++|++|+|+.+ . ++|+|+||+|++|+.++|+||||||||||+++|+|+++|++|+
T Consensus 465 ~~---------~~~~~~~I~~~~vsf~y~~~--~---~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~ 530 (708)
T TIGR01193 465 TE---------LNNLNGDIVINDVSYSYGYG--S---NILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGE 530 (708)
T ss_pred cC---------CCCCCCcEEEEEEEEEcCCC--C---cceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcE
Confidence 00 01223579999999999632 2 3599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------cEEEEcCCCCCCCcCHHHHhccCC--CCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000511 664 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1455)
Q Consensus 664 i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~ 728 (1455)
|.++| .|+||||+|++|++||||||.+|. +.++++..++++.++++++++.+|+|++|.+||+|.
T Consensus 531 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 531 ILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99987 599999999999999999999983 478889999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEE
Q 000511 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1455)
Q Consensus 729 ~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1455)
+|||||||||+||||++++|+|+|||||||+||+++++++.+.+ .. .+++|+|+||||++.+..||+|++|++|+++
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L-~~--~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~ 687 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNL-LN--LQDKTIIFVAHRLSVAKQSDKIIVLDHGKII 687 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHH-HH--hcCCEEEEEecchHHHHcCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999998874 43 3679999999999999999999999999999
Q ss_pred EecCHHHHHhccccC
Q 000511 809 WIGSSADLAVSLYSG 823 (1455)
Q Consensus 809 ~~g~~~~l~~~~~~~ 823 (1455)
+.|+++|+++..+.+
T Consensus 688 ~~G~~~~L~~~~~~y 702 (708)
T TIGR01193 688 EQGSHDELLDRNGFY 702 (708)
T ss_pred EECCHHHHHhcCCcH
Confidence 999999998765443
No 46
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.2e-64 Score=646.74 Aligned_cols=539 Identities=18% Similarity=0.202 Sum_probs=429.5
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 267 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 346 (1455)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (1455)
+..++.+++.++..++..++..++..+.|++++.+++.+..+........++.+++++.++..++.....+...+++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 96 (582)
T PRK11176 17 WPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKV 96 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777777777777777888899999999987654322222222333344455666666666667788889999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000511 347 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 425 (1455)
Q Consensus 347 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~ 425 (1455)
...+...+|+|.++++.....+.+.|++++.++.|++.+.+.. ..+..++..++.+++.+.+++..-++.+++.+++++
T Consensus 97 ~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~ 176 (582)
T PRK11176 97 VMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAP 176 (582)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998888999999999999999998743 345555666665555554444433333333334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 426 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 505 (1455)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 505 (1455)
+.+.+..++.+++++..++.++..++..+...|.++|+++||.+|+|+.+.+++++.-++-.+...+..........+..
T Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (582)
T PRK11176 177 IVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQ 256 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555667788888888999999999999999999999999999999988888877655444444444443333322222
Q ss_pred HHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcC
Q 000511 506 TTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 583 (1455)
Q Consensus 506 ~~~--~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 583 (1455)
... ..+.++.++.|.+..+.++++.+.++++++..+..|+..+...+..+.+++.+++|+.++++.++..+....
T Consensus 257 ~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~--- 333 (582)
T PRK11176 257 LIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR--- 333 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc---
Confidence 222 223445667777778899999999999999999999999999999999999999999999976543211000
Q ss_pred CCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcE
Q 000511 584 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 663 (1455)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~ 663 (1455)
. .+.....++++|++|+|++. + +++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+
T Consensus 334 -~---------~~~~~~~i~~~~vsf~y~~~-~---~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~ 399 (582)
T PRK11176 334 -V---------IERAKGDIEFRNVTFTYPGK-E---VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGE 399 (582)
T ss_pred -C---------CCCCCCeEEEEEEEEecCCC-C---CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCce
Confidence 0 01123469999999999643 1 23599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------cEEEEcCCCCCCCcCHHHHhccCC--CCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000511 664 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1455)
Q Consensus 664 i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~ 728 (1455)
|.++| .|+||||+|.+|++||||||.+|. ++++++++++++.++++++++.+|+|++|.+|++|.
T Consensus 400 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~ 479 (582)
T PRK11176 400 ILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGV 479 (582)
T ss_pred EEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCC
Confidence 99986 589999999999999999999985 378999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEE
Q 000511 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1455)
Q Consensus 729 ~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1455)
+||||||||++||||+|++|+|++|||||||||+++++.+++. +.. +.+++|+|+||||++.++.||+|++|++|+++
T Consensus 480 ~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~-l~~-~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~ 557 (582)
T PRK11176 480 LLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAA-LDE-LQKNRTSLVIAHRLSTIEKADEILVVEDGEIV 557 (582)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999887 433 44679999999999999999999999999999
Q ss_pred EecCHHHHHhccccCc
Q 000511 809 WIGSSADLAVSLYSGF 824 (1455)
Q Consensus 809 ~~g~~~~l~~~~~~~~ 824 (1455)
++|+++++++..+.+.
T Consensus 558 e~g~~~~l~~~~~~y~ 573 (582)
T PRK11176 558 ERGTHAELLAQNGVYA 573 (582)
T ss_pred EeCCHHHHHhCCChHH
Confidence 9999999987655443
No 47
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.1e-64 Score=643.64 Aligned_cols=535 Identities=20% Similarity=0.229 Sum_probs=438.0
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 267 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 346 (1455)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (1455)
+.+++.+++.++...++.++..++...+|++++.+++...........+.++++++++.++..++.....+...+.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 85 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKV 85 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778888888889999999999999999999986554332223333344455566677777777778888999999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000511 347 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 425 (1455)
Q Consensus 347 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~ 425 (1455)
...+...+|+|.++.+.....+.+.|++.+.++.|++++.+... .+..++...+.+++++.+++..-.+.+++.+++++
T Consensus 86 ~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~ 165 (571)
T TIGR02203 86 VRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLP 165 (571)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999888888999999999999999987553 45555555555444444433332333333444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 426 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 505 (1455)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 505 (1455)
+.+.+..++.++.++..++..+..+++.+.++|.++|+++||.++.|+.+.+++++..++..+...+..........+..
T Consensus 166 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (571)
T TIGR02203 166 VLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQ 245 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566778888888999999999999999999999999999999999998888888776666655555444444333322
Q ss_pred HHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcC
Q 000511 506 TTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 583 (1455)
Q Consensus 506 ~~~~--~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 583 (1455)
.... .+.++.+|.+.+..+.+|++.+++++.+++.+..|+..+...+..+.+++++++|+.++++.++..+...
T Consensus 246 ~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~---- 321 (571)
T TIGR02203 246 LIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGT---- 321 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC----
Confidence 2222 2345567778888899999999999999999999999999999999999999999999997654322100
Q ss_pred CCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcE
Q 000511 584 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 663 (1455)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~ 663 (1455)
.+. +.....++++|++|+|++.+ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+
T Consensus 322 ~~~---------~~~~~~i~~~~v~f~y~~~~----~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~ 388 (571)
T TIGR02203 322 RAI---------ERARGDVEFRNVTFRYPGRD----RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQ 388 (571)
T ss_pred CCC---------CCCCCeEEEEEEEEEcCCCC----CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCe
Confidence 000 11234699999999997532 24599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------cEEEEcCCCCCCCcCHHHHhccCC--CCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000511 664 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1455)
Q Consensus 664 i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~ 728 (1455)
|.++| .++||||+|++|++||||||.++. +.++++..++++.|++++++..+|+|.+|.+|++|.
T Consensus 389 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~ 468 (571)
T TIGR02203 389 ILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGV 468 (571)
T ss_pred EEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCC
Confidence 99987 499999999999999999999985 588999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEE
Q 000511 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1455)
Q Consensus 729 ~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1455)
+||||||||++||||++++|+|++||||||+||+++++++.+. +.. ..+++|+|+|||+.+.++.||+|++|++|+++
T Consensus 469 ~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~-L~~-~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~ 546 (571)
T TIGR02203 469 LLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAA-LER-LMQGRTTLVIAHRLSTIEKADRIVVMDDGRIV 546 (571)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHH-HhCCCEEEEEehhhHHHHhCCEEEEEeCCEEE
Confidence 9999999999999999999999999999999999999999887 443 45689999999999999999999999999999
Q ss_pred EecCHHHHHhcc
Q 000511 809 WIGSSADLAVSL 820 (1455)
Q Consensus 809 ~~g~~~~l~~~~ 820 (1455)
+.|+++++.+..
T Consensus 547 ~~g~~~~l~~~~ 558 (571)
T TIGR02203 547 ERGTHNELLARN 558 (571)
T ss_pred eeCCHHHHHHcC
Confidence 999999997653
No 48
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-66 Score=658.72 Aligned_cols=492 Identities=22% Similarity=0.306 Sum_probs=354.7
Q ss_pred CceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC----------
Q 000511 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1455)
Q Consensus 599 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 668 (1455)
+..++++|++++|..... ..++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 10 ~~~l~v~~l~~~y~~~~~--~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~ 87 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQ--KIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQV 87 (623)
T ss_pred CceEEEeceEEEecCCCC--ceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccc
Confidence 346899999999963211 12469999999999999999999999999999999999999999987643
Q ss_pred -----------------cEEEEcCCC--CCCC-cCHHHHhccCC----CCCH----HHHHHHHHHhcchHHHhhccCCCc
Q 000511 669 -----------------SIAYVPQVP--WILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDM 720 (1455)
Q Consensus 669 -----------------~i~y~~Q~p--~l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~l~~gd~ 720 (1455)
.||||+|+| -++. .||+|||.++. ..+. ++..++++..++.. . .
T Consensus 88 ~~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-------~-~ 159 (623)
T PRK10261 88 IELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPE-------A-Q 159 (623)
T ss_pred cccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCC-------h-h
Confidence 489999998 4554 59999998752 1222 23444555555521 0 1
Q ss_pred ccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcccccc-CCE
Q 000511 721 AYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADM 798 (1455)
Q Consensus 721 t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~ 798 (1455)
........+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+. +.... ..|+|+|+|||+++.+.. ||+
T Consensus 160 ~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~l-l~~l~~~~g~tvi~itHdl~~~~~~adr 238 (623)
T PRK10261 160 TILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQL-IKVLQKEMSMGVIFITHDMGVVAEIADR 238 (623)
T ss_pred hHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCE
Confidence 123456679999999999999999999999999999999999998888775 33311 237899999999998764 999
Q ss_pred EEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcC
Q 000511 799 VVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEG 878 (1455)
Q Consensus 799 i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g 878 (1455)
|++|++|++++.|+++++...... .+ ...
T Consensus 239 i~vl~~G~i~~~g~~~~~~~~~~~------~~-----------------------------------~~~---------- 267 (623)
T PRK10261 239 VLVMYQGEAVETGSVEQIFHAPQH------PY-----------------------------------TRA---------- 267 (623)
T ss_pred EEEeeCCeecccCCHHHhhcCCCC------hh-----------------------------------hhh----------
Confidence 999999999998887765321000 00 000
Q ss_pred cchhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 000511 879 RVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFS 958 (1455)
Q Consensus 879 ~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 958 (1455)
++. ..+. +..+.
T Consensus 268 ---------l~~---------------------~~~~--~~~~~------------------------------------ 279 (623)
T PRK10261 268 ---------LLA---------------------AVPQ--LGAMK------------------------------------ 279 (623)
T ss_pred ---------hhh---------------------ccCc--ccccc------------------------------------
Confidence 000 0000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 000511 959 FAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFL 1038 (1455)
Q Consensus 959 ~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 1038 (1455)
|+ .++
T Consensus 280 ---------------------------------~~--------------~~~---------------------------- 284 (623)
T PRK10261 280 ---------------------------------GL--------------DYP---------------------------- 284 (623)
T ss_pred ---------------------------------cc--------------cCC----------------------------
Confidence 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1039 LLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS 1118 (1455)
Q Consensus 1039 l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1118 (1455)
.+.|.. +
T Consensus 285 ------------------------------~~~~~~----~--------------------------------------- 291 (623)
T PRK10261 285 ------------------------------RRFPLI----S--------------------------------------- 291 (623)
T ss_pred ------------------------------cccccc----c---------------------------------------
Confidence 000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 000511 1119 LWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1198 (1455)
Q Consensus 1119 ~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~ 1198 (1455)
.. . .. .. .
T Consensus 292 ---------------------~~---~-~~-~~----------------------------------------------~ 299 (623)
T PRK10261 292 ---------------------LE---H-PA-KQ----------------------------------------------E 299 (623)
T ss_pred ---------------------cc---c-cc-cc----------------------------------------------C
Confidence 00 0 00 00 0
Q ss_pred CccccccCCCCCCCCCCCccEEEEEEEEEecCC---------CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcC
Q 000511 1199 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL 1269 (1455)
Q Consensus 1199 ~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl 1269 (1455)
+.+. . ...+ +....++++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|.|+
T Consensus 300 ~~~~-~--~~~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl 373 (623)
T PRK10261 300 PPIE-Q--DTVV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRL 373 (623)
T ss_pred cccc-c--cccc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcC
Confidence 0000 0 0000 012259999999999621 13699999999999999999999999999999999999
Q ss_pred CCCCCceEEECCEeCCCCChH---HHhcccEEEeCCCC--CCCC-cHHHhcCcC----CCCChHHHHHHHHHhcHHHHHH
Q 000511 1270 TPICGGQILVDGLNIINTPVR---DLRGRFAVVPQSPF--LFEG-SLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVE 1339 (1455)
Q Consensus 1270 ~~~~~G~I~IdG~di~~i~~~---~lR~~i~~VpQdp~--lf~g-TIreNLdp~----~~~~d~ei~~aL~~~~l~~~i~ 1339 (1455)
++|++|+|.++|.++...+.. .+|++++||||+|. +++. |+++|+... +....++.. ....+.++
T Consensus 374 ~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~L~ 448 (623)
T PRK10261 374 VESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAA-----ARVAWLLE 448 (623)
T ss_pred CCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHH-----HHHHHHHH
Confidence 999999999999999877643 45788999999983 6654 999998531 111111111 11233444
Q ss_pred hCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh
Q 000511 1340 AVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL 1416 (1455)
Q Consensus 1340 ~lgLd-t~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~ 1416 (1455)
.+|++ .........||||||||++|||||+.+|+|||||||||+||..+.+.+.+.|++.. .+.|||+|||+++.+.
T Consensus 449 ~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~ 528 (623)
T PRK10261 449 RVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVE 528 (623)
T ss_pred HcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 45775 34555667899999999999999999999999999999999999999999998764 3789999999999987
Q ss_pred h-hCEEEEEeCCeEEEeCChhHHhccCCcHHH-HHHH
Q 000511 1417 N-MDEILILDHGHLVEQGNPQTLLQDECSVFS-SFVR 1451 (1455)
Q Consensus 1417 ~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~-~l~~ 1451 (1455)
. ||||++|++|+|+|.|+++++..++...|. .++.
T Consensus 529 ~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 529 RISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred HhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHh
Confidence 6 899999999999999999999877655453 3443
No 49
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2e-63 Score=634.95 Aligned_cols=541 Identities=18% Similarity=0.218 Sum_probs=425.5
Q ss_pred hHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 265 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1455)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 344 (1455)
.++.+++.+++.++...++.++..++.++.|++++.++|.+-.+.+......+++.++++.++..++...+.+...+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (576)
T TIGR02204 8 ALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGE 87 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566777788888889999999999999999999974322222222223333444445555666667788889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHHH
Q 000511 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVA-LYLLYTQVKFAFVSGLA 422 (1455)
Q Consensus 345 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~-~~lL~~~lg~a~l~g~~ 422 (1455)
++...+...+|+|.++.+.....+.+.|++.+.++.|++.+.+... .+..++...+.++++ +++++....++.++.+
T Consensus 88 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~- 166 (576)
T TIGR02204 88 RVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLL- 166 (576)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-
Confidence 9999999999999999999888888899999999999999987643 344444444333333 2333333332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 423 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 502 (1455)
Q Consensus 423 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 502 (1455)
.+++.+.+..++.+++++..+++++..++..+...|.++|+++||.+++|+.+.+++++..++..+...+......+...
T Consensus 167 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (576)
T TIGR02204 167 AVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTA 246 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233334456788888899999999999999999999999999999999998888887766555554444433333222
Q ss_pred HHHHH--HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhh
Q 000511 503 FWATT--PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 580 (1455)
Q Consensus 503 ~~~~~--~~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 580 (1455)
+.... ...+.++.+|++.+..+.++++.++++..+...+..|+..++..+..+.+++.+++||.++++.++..+....
T Consensus 247 ~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 326 (576)
T TIGR02204 247 IVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAH 326 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCC
Confidence 22111 2233445677888888899999999999999999999999999999999999999999999976532110000
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000511 581 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 660 (1455)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~ 660 (1455)
. ...+ ......++++|++|+|+.+++ +++|+|+||+++|||.++|+|++|||||||+++|+|+++|.
T Consensus 327 ~-~~~~---------~~~~~~i~~~~v~f~y~~~~~---~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~ 393 (576)
T TIGR02204 327 P-KTLP---------VPLRGEIEFEQVNFAYPARPD---QPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ 393 (576)
T ss_pred C-ccCC---------cCCCceEEEEEEEEECCCCCC---CccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC
Confidence 0 0000 012346999999999975322 24599999999999999999999999999999999999999
Q ss_pred CcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000511 661 HGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 726 (1455)
Q Consensus 661 ~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~ 726 (1455)
+|+|.++| .++||||+|++|++||||||.++.+ .++++..++++.+++.++++.+|+|++|.+|++
T Consensus 394 ~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~ 473 (576)
T TIGR02204 394 SGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGER 473 (576)
T ss_pred CCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCC
Confidence 99999987 5999999999999999999999864 577889999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCe
Q 000511 727 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1455)
Q Consensus 727 g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1455)
|.+||||||||++||||++++|++++||||||+||+++++.+++. +.. ..+++|+|+|||+.+.++.+|+|++|++|+
T Consensus 474 g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~-l~~-~~~~~t~IiitH~~~~~~~~d~vi~l~~g~ 551 (576)
T TIGR02204 474 GVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQA-LET-LMKGRTTLIIAHRLATVLKADRIVVMDQGR 551 (576)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999988876 443 456899999999999999999999999999
Q ss_pred EEEecCHHHHHhccc
Q 000511 807 VKWIGSSADLAVSLY 821 (1455)
Q Consensus 807 i~~~g~~~~l~~~~~ 821 (1455)
+++.|+++++.+..+
T Consensus 552 ~~~~g~~~~l~~~~~ 566 (576)
T TIGR02204 552 IVAQGTHAELIAKGG 566 (576)
T ss_pred EEeeecHHHHHHcCC
Confidence 999999999876543
No 50
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.8e-63 Score=628.32 Aligned_cols=504 Identities=20% Similarity=0.182 Sum_probs=391.9
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 268 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 347 (1455)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r 347 (1455)
.+.+.+++.++...++.++..++..+.|++++.++|.+.........+.+.++++++.++..++.....+...+.+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSL 85 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677777778888899999999999999999876542221111111222223445566666666777788899999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHH
Q 000511 348 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYL---LYTQVKFAFVSGLAI 423 (1455)
Q Consensus 348 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~i~~~l---L~~~lg~a~l~g~~v 423 (1455)
..+...+|+|.++++...+.+.++|++++.++.|++++.+.... +..+....+.+++++.+ +.+.+++.++++++
T Consensus 86 ~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~- 164 (529)
T TIGR02868 86 GRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLL- 164 (529)
T ss_pred HHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-
Confidence 99999999999999999998999999999999999999876543 34444444433333332 33333333333222
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 424 TILLIPVN-KWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 502 (1455)
Q Consensus 424 ~~~~~~~~-~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 502 (1455)
++..+. .+..+..++..++..+..++..+...|.++|+++||.+++|+.+.+++++..++..+...+.....+....
T Consensus 165 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (529)
T TIGR02868 165 --LAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAA 242 (529)
T ss_pred --HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222 23334345566777788899999999999999999999999999999988776666665555555544433
Q ss_pred HHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhh
Q 000511 503 FWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 580 (1455)
Q Consensus 503 ~~~~~~~--~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 580 (1455)
+...... .+.++.+|.|.+.++.++++.+.+.+.+...+..|+..++..+..+.++.++.+|+.++++.++..+....
T Consensus 243 ~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 322 (529)
T TIGR02868 243 AQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVV 322 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCC
Confidence 3322222 23345667788888899999999999999999999999999999999999999999999976543211000
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000511 581 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 660 (1455)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~ 660 (1455)
..+. ........|+++|++|+|+++ + ++|+|+||++++||.++|+||+|||||||+++|+|+++|+
T Consensus 323 --~~~~-------~~~~~~~~I~~~~vsf~Y~~~--~---~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~ 388 (529)
T TIGR02868 323 --PAAG-------ALGLGKPTLELRDLSFGYPGS--P---PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPL 388 (529)
T ss_pred --CCCc-------ccCCCCceEEEEEEEEecCCC--C---ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 0000 001123469999999999743 2 2599999999999999999999999999999999999999
Q ss_pred CcEEEEcC------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000511 661 HGSIHASG------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKG 727 (1455)
Q Consensus 661 ~G~i~~~~------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g 727 (1455)
+|+|.++| .|+||||+|++|++||||||.+|.+ .+++++.++++.|+++++++.+|+|++|.+||+|
T Consensus 389 ~G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 468 (529)
T TIGR02868 389 QGEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGG 468 (529)
T ss_pred CcEEEECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhcccc
Confidence 99999998 7999999999999999999999864 6889999999999999999999999999999999
Q ss_pred CccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCc
Q 000511 728 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNV 790 (1455)
Q Consensus 728 ~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~ 790 (1455)
.+||||||||++||||++++|+|++||||||+||+++++.|.+.+ .. ..+++|+|+||||+
T Consensus 469 ~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l-~~-~~~~~TvIiItHrl 529 (529)
T TIGR02868 469 ARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDL-LA-ALSGKTVVVITHHL 529 (529)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HH-hcCCCEEEEEecCC
Confidence 999999999999999999999999999999999999999999884 43 56789999999985
No 51
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.2e-63 Score=635.34 Aligned_cols=532 Identities=18% Similarity=0.219 Sum_probs=414.9
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 268 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLD--GYVLAIALGLTSILKSFFDTQYSFHLSKLKLK 345 (1455)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~--g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 345 (1455)
..++.+++.++...++.++..++..+.|+++..++|.+..+.+... ...+++++++..++..++.....+...+.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (592)
T PRK10790 16 AYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVG 95 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667777778888899999999999999999997754222111 12223334445556667777777788889999
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHH-HH--HHHhHHHHHHHH
Q 000511 346 LRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALY-LL--YTQVKFAFVSGL 421 (1455)
Q Consensus 346 ~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~i~~~-lL--~~~lg~a~l~g~ 421 (1455)
+...+...+|+|.++.+...+.+.+.|+++|.++.|++++.+.... +..+....+.+++.+. ++ .+.+++..+++
T Consensus 96 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~- 174 (592)
T PRK10790 96 VVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMI- 174 (592)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999998888889999999999999999875443 3333333333333222 22 22333332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000511 422 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC- 500 (1455)
Q Consensus 422 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~- 500 (1455)
+++.+.+..+..++..+..++..+..++..+...|.++|+++||.|+.|+.+.+++.+..++..+...+........
T Consensus 175 --~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (592)
T PRK10790 175 --FPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLL 252 (592)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223344555666677777777888888899999999999999999999999888877655444433322222211
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 000511 501 ---VFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 577 (1455)
Q Consensus 501 ---~~~~~~~~~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~ 577 (1455)
..+......+..++. +.+ +..+.++.+.+++++.++..+..|+..++..+..+.++..+.+||.++++.++.++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~-~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 330 (592)
T PRK10790 253 RPLLSLFSALILCGLLML-FGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG 330 (592)
T ss_pred HHHHHHHHHHHHHHHHHH-HHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC
Confidence 111111111111222 223 356789999999999999999999999999999999999999999999975432111
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000511 578 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 657 (1455)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~ 657 (1455)
.. .. ......++++|++|+|+.+ . ++|+|+||++++||.++|+|+||||||||+++|+|++
T Consensus 331 ~~---~~-----------~~~~~~i~~~~v~f~y~~~--~---~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~ 391 (592)
T PRK10790 331 ND---DR-----------PLQSGRIDIDNVSFAYRDD--N---LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYY 391 (592)
T ss_pred CC---cc-----------CCCCCeEEEEEEEEEeCCC--C---ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhccc
Confidence 00 00 1123469999999999732 2 3599999999999999999999999999999999999
Q ss_pred cCCCcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCccccc
Q 000511 658 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIG 724 (1455)
Q Consensus 658 ~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig 724 (1455)
+|++|+|.++| .|+||||+|++|++||||||.+|++.++++..+++++++++++++.+|+|++|.+|
T Consensus 392 ~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~ 471 (592)
T PRK10790 392 PLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLG 471 (592)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhcccccccccc
Confidence 99999999987 49999999999999999999999988999999999999999999999999999999
Q ss_pred CCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeC
Q 000511 725 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 804 (1455)
Q Consensus 725 ~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~ 804 (1455)
++|.+||||||||++||||++++|+|+|||||||+||+++++.|.+. +.. +.+++|+|+||||++.++.||+|++|++
T Consensus 472 e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~-l~~-~~~~~tvIivtHr~~~l~~~D~ii~l~~ 549 (592)
T PRK10790 472 EQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQA-LAA-VREHTTLVVIAHRLSTIVEADTILVLHR 549 (592)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999887 433 4467999999999999999999999999
Q ss_pred CeEEEecCHHHHHhccccCcc
Q 000511 805 GQVKWIGSSADLAVSLYSGFW 825 (1455)
Q Consensus 805 G~i~~~g~~~~l~~~~~~~~~ 825 (1455)
|++++.|+++|+++..+.+..
T Consensus 550 G~i~~~G~~~~L~~~~~~y~~ 570 (592)
T PRK10790 550 GQAVEQGTHQQLLAAQGRYWQ 570 (592)
T ss_pred CEEEEEcCHHHHHhCCCHHHH
Confidence 999999999999876554443
No 52
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=6.5e-63 Score=640.62 Aligned_cols=540 Identities=19% Similarity=0.224 Sum_probs=438.4
Q ss_pred hHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 265 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1455)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 344 (1455)
.++..++.+++.+...++..++..++.++.|++++.++|.+-...+....+.++++++++.++..++.....+...+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 208 (694)
T TIGR01846 129 WFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTS 208 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566777788888899999999999999999999987543333344455566666777788888888889999999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000511 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAW-SLPFQIGVALYLLYTQVKFAFVSGLA 422 (1455)
Q Consensus 345 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~-~~pl~i~i~~~lL~~~lg~a~l~g~~ 422 (1455)
++...+...+|+|.++++...+.+.++|++++.+ .|++.+.+... .+..+. ..++-++. +.+++..-++.+++.++
T Consensus 209 ~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~ 286 (694)
T TIGR01846 209 RIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVF-LAVMFFYSPTLTGVVIG 286 (694)
T ss_pred HHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 59999987643 333333 33333333 22332322223333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 423 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 502 (1455)
Q Consensus 423 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 502 (1455)
++++...+..++.+++++..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++++..++..+...+..........
T Consensus 287 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (694)
T TIGR01846 287 SLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQ 366 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555667778888888889999999999999999999999999999999988888776666665555555444433
Q ss_pred HHHHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhh
Q 000511 503 FWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 580 (1455)
Q Consensus 503 ~~~~~~--~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 580 (1455)
+..... ..+.++++|+|.+..+.+|+|.++++..+...+..|+..+...+..+.+++++++|+.++++.++..+.. .
T Consensus 367 ~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-~ 445 (694)
T TIGR01846 367 AIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA-G 445 (694)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC-C
Confidence 332222 2234567888888888999999999999999999999999999999999999999999999765432110 0
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000511 581 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 660 (1455)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~ 660 (1455)
... .+..+..++++|++|+|++++ +++|+|+||++++|+.++|+|+||||||||+++|+|+++|+
T Consensus 446 ---~~~--------~~~~~~~i~~~~vsf~y~~~~----~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~ 510 (694)
T TIGR01846 446 ---LAA--------LPELRGAITFENIRFRYAPDS----PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ 510 (694)
T ss_pred ---CCC--------CCCCCCeEEEEEEEEEcCCCC----ccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 000 012235699999999997432 23599999999999999999999999999999999999999
Q ss_pred CcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCC-CCCHHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000511 661 HGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 726 (1455)
Q Consensus 661 ~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~ 726 (1455)
+|+|.++| .|+||+|+|++|++||+|||.++. ..++++..++++.++++++++.+|+|.+|.+|++
T Consensus 511 ~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 511 HGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred CceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 99999987 489999999999999999999976 4778899999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCe
Q 000511 727 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1455)
Q Consensus 727 g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1455)
|.+||||||||++||||++++|+|+|||||||+||+++++.+.+. +.. ..+++|+|++||+++.++.||+|++|++|+
T Consensus 591 g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~-~~~~~t~i~itH~~~~~~~~d~ii~l~~G~ 668 (694)
T TIGR01846 591 GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRN-MRE-ICRGRTVIIIAHRLSTVRACDRIIVLEKGQ 668 (694)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHH-HhCCCEEEEEeCChHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999887 433 456899999999999999999999999999
Q ss_pred EEEecCHHHHHhccccCc
Q 000511 807 VKWIGSSADLAVSLYSGF 824 (1455)
Q Consensus 807 i~~~g~~~~l~~~~~~~~ 824 (1455)
++++|+++++++..+.+.
T Consensus 669 i~~~g~~~~l~~~~~~y~ 686 (694)
T TIGR01846 669 IAESGRHEELLALQGLYA 686 (694)
T ss_pred EEEeCCHHHHHHcCChHH
Confidence 999999999987655443
No 53
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2e-65 Score=643.99 Aligned_cols=455 Identities=25% Similarity=0.342 Sum_probs=344.7
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEcC-------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 668 (1455)
.++++|++++|+.... ..++|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~--~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 82 (529)
T PRK15134 5 LLAIENLSVAFRQQQT--VRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHAS 82 (529)
T ss_pred eEEEeceEEEecCCCC--ceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCC
Confidence 4789999999863211 12469999999999999999999999999999999999986 799998754
Q ss_pred ----------cEEEEcCCCC--CCC-cCHHHHhccCC----CCCH----HHHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000511 669 ----------SIAYVPQVPW--ILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKG 727 (1455)
Q Consensus 669 ----------~i~y~~Q~p~--l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g 727 (1455)
.++|++|+|. ++. .|+++|+.++. ..+. ++..++++.+++.... .......
T Consensus 83 ~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~ 154 (529)
T PRK15134 83 EQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYP 154 (529)
T ss_pred HHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCC
Confidence 4899999985 443 59999986421 1222 3445566666664210 0123456
Q ss_pred CccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcccccc-CCEEEEEeCC
Q 000511 728 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKG 805 (1455)
Q Consensus 728 ~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G 805 (1455)
.+|||||||||+||||++.+|+++||||||++||+...+++.+. +..... .++|+|+|||+++.+.. ||+|++|++|
T Consensus 155 ~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G 233 (529)
T PRK15134 155 HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQL-LRELQQELNMGLLFITHNLSIVRKLADRVAVMQNG 233 (529)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHH-HHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECC
Confidence 68999999999999999999999999999999999999988875 332112 37899999999998764 9999999999
Q ss_pred eEEEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHH
Q 000511 806 QVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVY 885 (1455)
Q Consensus 806 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 885 (1455)
++++.|+++++.... . . . +
T Consensus 234 ~i~~~g~~~~~~~~~--------------------------------------------~------------~--~---~ 252 (529)
T PRK15134 234 RCVEQNRAATLFSAP--------------------------------------------T------------H--P---Y 252 (529)
T ss_pred EEEEeCCHHHHhhCC--------------------------------------------C------------C--H---H
Confidence 999887765542100 0 0 0 0
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 886 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLR 965 (1455)
Q Consensus 886 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 965 (1455)
.+
T Consensus 253 ---~~--------------------------------------------------------------------------- 254 (529)
T PRK15134 253 ---TQ--------------------------------------------------------------------------- 254 (529)
T ss_pred ---HH---------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 000511 966 AAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFW 1045 (1455)
Q Consensus 966 ~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~ 1045 (1455)
T Consensus 255 -------------------------------------------------------------------------------- 254 (529)
T PRK15134 255 -------------------------------------------------------------------------------- 254 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1046 FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL 1125 (1455)
Q Consensus 1046 ~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l 1125 (1455)
++. +.
T Consensus 255 ---------------~~~--~~---------------------------------------------------------- 259 (529)
T PRK15134 255 ---------------KLL--NS---------------------------------------------------------- 259 (529)
T ss_pred ---------------HHH--Hh----------------------------------------------------------
Confidence 000 00
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccc
Q 000511 1126 QLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCG 1205 (1455)
Q Consensus 1126 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~ 1205 (1455)
. .. .++..
T Consensus 260 ---------------------~--~~----------------------------------------------~~~~~--- 267 (529)
T PRK15134 260 ---------------------E--PS----------------------------------------------GDPVP--- 267 (529)
T ss_pred ---------------------C--cc----------------------------------------------ccccc---
Confidence 0 00 00000
Q ss_pred CCCCCCCCCCCccEEEEEEEEEecC---------CCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCce
Q 000511 1206 YQSLSPDWPFQGLIEFQNVTMRYKP---------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQ 1276 (1455)
Q Consensus 1206 ~~~~~~~wp~~g~I~f~nvs~~Y~~---------~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~ 1276 (1455)
..++ ....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ ++|+
T Consensus 268 -~~~~----~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~ 341 (529)
T PRK15134 268 -LPEP----ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGE 341 (529)
T ss_pred -cCCC----CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcE
Confidence 0000 0124899999999952 12469999999999999999999999999999999999995 8999
Q ss_pred EEECCEeCCCCChHH---HhcccEEEeCCC--CCCC-CcHHHhcCcCC-----CCChHHHHHHHHHhcHHHHHHhCCCc-
Q 000511 1277 ILVDGLNIINTPVRD---LRGRFAVVPQSP--FLFE-GSLRDNLDPFH-----MNDDLKIWSVLEKCHVKEEVEAVGLE- 1344 (1455)
Q Consensus 1277 I~IdG~di~~i~~~~---lR~~i~~VpQdp--~lf~-gTIreNLdp~~-----~~~d~ei~~aL~~~~l~~~i~~lgLd- 1344 (1455)
|.+||.++...+... +|++++||||+| .+|+ .|+++|+.... ..+..+. +..+.+.++.+|++
T Consensus 342 i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~ 416 (529)
T PRK15134 342 IWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQR-----EQQVIAVMEEVGLDP 416 (529)
T ss_pred EEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHH-----HHHHHHHHHHcCCCH
Confidence 999999998776543 477899999998 3666 49999996421 0111111 11233445555775
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEE
Q 000511 1345 TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEI 1421 (1455)
Q Consensus 1345 t~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI 1421 (1455)
........+||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||
T Consensus 417 ~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i 496 (529)
T PRK15134 417 ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQV 496 (529)
T ss_pred HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeE
Confidence 34566667899999999999999999999999999999999999999999998764 27899999999999876 8999
Q ss_pred EEEeCCeEEEeCChhHHhccCC
Q 000511 1422 LILDHGHLVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1422 ~vl~~G~ive~G~p~eLl~~~~ 1443 (1455)
++|++|++++.|+++++++++.
T Consensus 497 ~~l~~G~i~~~~~~~~~~~~~~ 518 (529)
T PRK15134 497 IVLRQGEVVEQGDCERVFAAPQ 518 (529)
T ss_pred EEEECCEEEEEcCHHHHhcCCC
Confidence 9999999999999999987654
No 54
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=3.1e-63 Score=626.53 Aligned_cols=510 Identities=16% Similarity=0.155 Sum_probs=384.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000511 903 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 982 (1455)
Q Consensus 903 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p 982 (1455)
+.++...+....++.++.+.+.... ... ..+..++++.++..++.+...+.....+.+...+++.++++++++.|
T Consensus 26 ~~~~~~~~~~~~~~~i~~~i~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~ 100 (555)
T TIGR01194 26 LGLAGGLAIIALLASINNAIHEENF--LGQ---GSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAP 100 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCc--ccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3444444555556666666553110 000 11222334455556677777788888999999999999999999999
Q ss_pred ccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 983 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1062 (1455)
Q Consensus 983 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l 1062 (1455)
+.||++.++|++++|+++|++.+++.+.. +..++..++.+++.++++++.+|.+.++++.++++...+..+..+..++.
T Consensus 101 ~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~ 179 (555)
T TIGR01194 101 IEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKF 179 (555)
T ss_pred HHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987753 55666666777777777777777766654443333333333332222333
Q ss_pred HHHHHHhhchhHhHHHHhhcchHHHHhcCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1063 RRLDSVSRSPIYASFTETLNGSSTIRAFKSED--YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1140 (1455)
Q Consensus 1063 ~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1140 (1455)
.+......+.+.+.+.|.+.|+++||+|+.++ ...+++.+..++..+................+++..+.+. +..
T Consensus 180 ~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 256 (555)
T TIGR01194 180 FHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIG---CAL 256 (555)
T ss_pred HHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 33344455678899999999999999999954 5566777766666665543322222211111222111111 111
Q ss_pred HHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccc--cc--cC-CCC--CCCC
Q 000511 1141 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE--LC--GY-QSL--SPDW 1213 (1455)
Q Consensus 1141 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~--~~--~~-~~~--~~~w 1213 (1455)
+++. . .+..+.|.+..++.++..+..++..+...+.+++....+.+|+.++.+.+.++ .. .. ... .+..
T Consensus 257 ~~~~--~--~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 332 (555)
T TIGR01194 257 FAAA--M--FASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHD 332 (555)
T ss_pred HHHH--H--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccC
Confidence 1111 0 12456788888888999999999999999999999999999999997632221 10 00 000 0111
Q ss_pred CCCccEEEEEEEEEecCC---CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH
Q 000511 1214 PFQGLIEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1290 (1455)
Q Consensus 1214 p~~g~I~f~nvs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~ 1290 (1455)
...+.|+|+||+|+|++. .+++|+|+||+|++||++|||||||||||||+++|.|+++|++|+|.+||+|+.+++.+
T Consensus 333 ~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~ 412 (555)
T TIGR01194 333 KSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRD 412 (555)
T ss_pred CCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHH
Confidence 234689999999999753 24699999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
++|+++++|||||++|++|+|+|+.+ ..++++++++++.++++++++.+ |+||. .+||||||||++||||+
T Consensus 413 ~~~~~i~~v~q~~~lf~~ti~~n~~~--~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRal 485 (555)
T TIGR01194 413 DYRDLFSAIFADFHLFDDLIGPDEGE--HASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAW 485 (555)
T ss_pred HHHhhCcEEccChhhhhhhhhccccc--chhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999743 45788999999999999999988 99984 58999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHH-h-cCCcEEEEeccChhhHhhhCEEEEEeCCeEEEe
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISS-E-CKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1432 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~-~-~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1432 (1455)
+++|+|||||||||+||++|++.+++.+.+ . .+++|+|+||||++++..||+|+||++|+++|.
T Consensus 486 l~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 486 LEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999887643 3 368999999999999999999999999999975
No 55
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-65 Score=639.80 Aligned_cols=443 Identities=23% Similarity=0.320 Sum_probs=339.1
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC--CCcEEEEcC----------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML--THGSIHASG---------- 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~--~~G~i~~~~---------- 668 (1455)
.++++|++++|.. . ++|+|+||++++|++++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~nl~~~~~~---~---~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 78 (506)
T PRK13549 5 LLEMKNITKTFGG---V---KALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRD 78 (506)
T ss_pred eEEEeeeEEEeCC---e---EeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHH
Confidence 4789999999852 2 359999999999999999999999999999999999986 899998865
Q ss_pred ----cEEEEcCCCCCCCc-CHHHHhccCCC------CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000511 669 ----SIAYVPQVPWILSG-TIRDNILFGKN------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1455)
Q Consensus 669 ----~i~y~~Q~p~l~~~-ti~~nI~~g~~------~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGG 733 (1455)
.++||+|+|.++.. |++||+.++.. .+.+ +..++++..++.. .......+||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG 147 (506)
T PRK13549 79 TERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDI-----------NPATPVGNLGLG 147 (506)
T ss_pred HHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCC-----------CcccchhhCCHH
Confidence 38999999987764 99999988642 1222 2233333333321 223456789999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecC
Q 000511 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 812 (1455)
Q Consensus 734 QkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 812 (1455)
|||||+||||+..+|+++||||||++||+...+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|+++..|+
T Consensus 148 qkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 226 (506)
T PRK13549 148 QQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDI-IRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRP 226 (506)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecc
Confidence 99999999999999999999999999999999888875 33312347899999999999865 99999999999987664
Q ss_pred HHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHHHhhhh
Q 000511 813 SADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFS 892 (1455)
Q Consensus 813 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~ 892 (1455)
.+++.. . . ... .+.
T Consensus 227 ~~~~~~-----------------------------------------------------~-~------~~~---~~~--- 240 (506)
T PRK13549 227 AAGMTE-----------------------------------------------------D-D------IIT---MMV--- 240 (506)
T ss_pred cccCCH-----------------------------------------------------H-H------HHH---Hhh---
Confidence 322100 0 0 000 000
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 893 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 972 (1455)
Q Consensus 893 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~ 972 (1455)
.
T Consensus 241 ------------------------------~------------------------------------------------- 241 (506)
T PRK13549 241 ------------------------------G------------------------------------------------- 241 (506)
T ss_pred ------------------------------C-------------------------------------------------
Confidence 0
Q ss_pred HHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 973 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1052 (1455)
Q Consensus 973 ~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~ 1052 (1455)
.+
T Consensus 242 --------~~---------------------------------------------------------------------- 243 (506)
T PRK13549 242 --------RE---------------------------------------------------------------------- 243 (506)
T ss_pred --------cC----------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1053 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFI 1132 (1455)
Q Consensus 1053 ~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~ 1132 (1455)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCC
Q 000511 1133 ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPD 1212 (1455)
Q Consensus 1133 ~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~ 1212 (1455)
.. + . .+.+. ++
T Consensus 244 -----------------~~---------------------------------------~---~--~~~~~------~~-- 254 (506)
T PRK13549 244 -----------------LT---------------------------------------A---L--YPREP------HT-- 254 (506)
T ss_pred -----------------cc---------------------------------------c---c--ccccc------cC--
Confidence 00 0 0 00000 00
Q ss_pred CCCCccEEEEEEEEEecC-CCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-CCCceEEECCEeCCCCCh-
Q 000511 1213 WPFQGLIEFQNVTMRYKP-SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-ICGGQILVDGLNIINTPV- 1289 (1455)
Q Consensus 1213 wp~~g~I~f~nvs~~Y~~-~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-~~~G~I~IdG~di~~i~~- 1289 (1455)
+....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+.
T Consensus 255 -~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~ 333 (506)
T PRK13549 255 -IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQ 333 (506)
T ss_pred -CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHH
Confidence 11225899999999952 23469999999999999999999999999999999999999 599999999999875543
Q ss_pred HHHhcccEEEeCCC---CCCC-CcHHHhcCcCC--CC------ChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCCh
Q 000511 1290 RDLRGRFAVVPQSP---FLFE-GSLRDNLDPFH--MN------DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSV 1356 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp---~lf~-gTIreNLdp~~--~~------~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSg 1356 (1455)
+..|++++|+||+| .+|+ .|+.+|+.... .. +..+ .+....+.++.+|++. ........|||
T Consensus 334 ~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSg 408 (506)
T PRK13549 334 QAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAA-----ELKTILESIQRLKVKTASPELAIARLSG 408 (506)
T ss_pred HHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHH-----HHHHHHHHHHhcCccCCCcccccccCCH
Confidence 45677899999997 3565 59999996421 11 1111 1122344555557753 44555678999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCC
Q 000511 1357 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1434 (1455)
Q Consensus 1357 GQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1434 (1455)
|||||++||||++++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|+++..|+
T Consensus 409 G~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~ 488 (506)
T PRK13549 409 GNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLI 488 (506)
T ss_pred HHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999999999998753 48899999999999876 89999999999999999
Q ss_pred hhHHh
Q 000511 1435 PQTLL 1439 (1455)
Q Consensus 1435 p~eLl 1439 (1455)
++++.
T Consensus 489 ~~~~~ 493 (506)
T PRK13549 489 NHNLT 493 (506)
T ss_pred cccCC
Confidence 98874
No 56
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2e-62 Score=621.69 Aligned_cols=534 Identities=19% Similarity=0.214 Sum_probs=416.2
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 269 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSG---HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1455)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~---~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 344 (1455)
+++.+++.++...++.++..++..+.|.+++.++|... .... .......+++++++.++..++.....+...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATF 89 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888899999999999999999998642 2211 0111112333444556677777777788889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHH--HHhHHHHHHH
Q 000511 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVAL-YLLY--TQVKFAFVSG 420 (1455)
Q Consensus 345 ~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~-~lL~--~~lg~a~l~g 420 (1455)
++...+...+|+|.++++....++.++|++++.++.|++++..+.. .+..+....+.+++++ ++++ +.+++.++++
T Consensus 90 ~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~ 169 (574)
T PRK11160 90 RVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGI 169 (574)
T ss_pred HHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888999999999999999998654 3444444444443332 2333 3333333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 421 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 500 (1455)
Q Consensus 421 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 500 (1455)
+ .++...+..++.++.++..++..+..++..+.+.|.++|+++||.|+.|+.+.+++++..++-.+...+.....+..
T Consensus 170 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
T PRK11160 170 L--LLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLS 247 (574)
T ss_pred H--HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22222233556677778888888999999999999999999999999999988888877655555544444444333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 000511 501 VFFWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSL-ISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 577 (1455)
Q Consensus 501 ~~~~~~~~--~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l-~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~ 577 (1455)
..+..... ..+.++.+|.+.+ ++.++++..++++.+..++ ..|+..++..+..+.++.++.+||.++++.++..+.
T Consensus 248 ~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~ 326 (574)
T PRK11160 248 QALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTF 326 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 22222211 2233455666664 6779999988877765443 468888999999999999999999999976532111
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000511 578 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 657 (1455)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~ 657 (1455)
... .+. ......++++|++|+|++++ +++|+|+||++++||.++|+||||||||||+++|+|++
T Consensus 327 ~~~---~~~---------~~~~~~i~~~~v~f~y~~~~----~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~ 390 (574)
T PRK11160 327 PTT---STA---------AADQVSLTLNNVSFTYPDQP----QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAW 390 (574)
T ss_pred Ccc---cCC---------CCCCCeEEEEEEEEECCCCC----CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 000 000 11235699999999996431 23599999999999999999999999999999999999
Q ss_pred cCCCcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccc
Q 000511 658 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYI 723 (1455)
Q Consensus 658 ~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~i 723 (1455)
+|++|+|.++| .|+||+|+|++|++||+|||.++.+ .++++..++++.++++++++. |+|++|.+
T Consensus 391 ~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~v 469 (574)
T PRK11160 391 DPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWL 469 (574)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchh
Confidence 99999999987 4999999999999999999999874 688899999999999999999 99999999
Q ss_pred cCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEe
Q 000511 724 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMD 803 (1455)
Q Consensus 724 g~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~ 803 (1455)
||+|.+||||||||++||||++++|++++||||||+||+++++.+.+. +.. ..+++|+|+||||++.++.||+|++|+
T Consensus 470 ge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~-l~~-~~~~~tviiitHr~~~~~~~d~i~~l~ 547 (574)
T PRK11160 470 GEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILEL-LAE-HAQNKTVLMITHRLTGLEQFDRICVMD 547 (574)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecChhHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999998887 443 456899999999999999999999999
Q ss_pred CCeEEEecCHHHHHhccccCc
Q 000511 804 KGQVKWIGSSADLAVSLYSGF 824 (1455)
Q Consensus 804 ~G~i~~~g~~~~l~~~~~~~~ 824 (1455)
+|++++.|+++|+++..+.+.
T Consensus 548 ~G~i~~~g~~~~l~~~~g~y~ 568 (574)
T PRK11160 548 NGQIIEQGTHQELLAQQGRYY 568 (574)
T ss_pred CCeEEEeCCHHHHHhcCcHHH
Confidence 999999999999987665443
No 57
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2e-62 Score=619.40 Aligned_cols=520 Identities=19% Similarity=0.224 Sum_probs=415.3
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 272 AYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIM 351 (1455)
Q Consensus 272 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~ 351 (1455)
.+++.++..+++.++..++..+.|++++.++|.+....+....+.+++.++++.++.+++.....+...+.+.++...+.
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777888889999999999999999999765322223334455566666777888888888889999999999999
Q ss_pred HHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHH
Q 000511 352 TIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVA--LYLLYTQVKFAFVSGLAITILL 427 (1455)
Q Consensus 352 ~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~--~~lL~~~lg~a~l~g~~v~~~~ 427 (1455)
..+|+|.++++... .+...+....|++++.+.... +..+...++.++.. ++.+.+.+++.++++++ +.
T Consensus 83 ~~~~~~ll~~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~---l~ 154 (544)
T TIGR01842 83 QPIFAASFSATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVCFLLHPWIGILALGGAV---VL 154 (544)
T ss_pred HHHHHHHhcCcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH---HH
Confidence 99999999998732 245667788999999876543 33344444443332 33333344444333322 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 428 IPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATT 507 (1455)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~ 507 (1455)
..+..+..++.++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..++..+...+.....+....+....
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666777788889999999999999999999999999999999999988877666555554444443333322222
Q ss_pred H--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCC
Q 000511 508 P--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSP 585 (1455)
Q Consensus 508 ~--~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~ 585 (1455)
. ..+.++++|.|.+.++.+|+|.+++++.++..+..|+..+...+..+.++..+.+|+.++++.++..+.. .+
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-----~~ 309 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA-----MP 309 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC-----CC
Confidence 1 2234566888888888999999999999999999999999999999999999999999999764432110 00
Q ss_pred CcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEE
Q 000511 586 SYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIH 665 (1455)
Q Consensus 586 ~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~ 665 (1455)
. +..+..++++|++|+|+..+ +++|+|+||++++|+.++|+||||||||||+++|+|+++|++|+|.
T Consensus 310 ~---------~~~~~~i~~~~v~~~y~~~~----~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~ 376 (544)
T TIGR01842 310 L---------PEPEGHLSVENVTIVPPGGK----KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVR 376 (544)
T ss_pred C---------CCCCCeEEEEEEEEEcCCCC----ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE
Confidence 0 11234699999999996431 2359999999999999999999999999999999999999999999
Q ss_pred EcC-------------cEEEEcCCCCCCCcCHHHHhccCC-CCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000511 666 ASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1455)
Q Consensus 666 ~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LS 731 (1455)
++| .++||||+|++|++|++|||.++. +.+++++.++++.+++++.++.+|+|++|.+|++|.+||
T Consensus 377 ~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LS 456 (544)
T TIGR01842 377 LDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLS 456 (544)
T ss_pred ECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCC
Confidence 886 599999999999999999998654 478889999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEec
Q 000511 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 732 GGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g 811 (1455)
||||||++||||++++|+++|||||||+||+++++.+.+. +.....+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 457 gGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g 535 (544)
T TIGR01842 457 GGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANA-IKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFG 535 (544)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHH-HHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeC
Confidence 9999999999999999999999999999999999998876 333123578999999999999899999999999999999
Q ss_pred CHHHHHh
Q 000511 812 SSADLAV 818 (1455)
Q Consensus 812 ~~~~l~~ 818 (1455)
+++++.+
T Consensus 536 ~~~~l~~ 542 (544)
T TIGR01842 536 ERDEVLA 542 (544)
T ss_pred CHHHHhh
Confidence 9998854
No 58
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=5.7e-65 Score=639.14 Aligned_cols=437 Identities=22% Similarity=0.361 Sum_probs=335.8
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc--cCCCcEEEEc------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM--MLTHGSIHAS------------ 667 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~--~~~~G~i~~~------------ 667 (1455)
++++|++++|.. . .+|+|+||++++|++++|+||||||||||+++|+|.. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~ 74 (520)
T TIGR03269 1 IEVKNLTKKFDG---K---EVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVER 74 (520)
T ss_pred CEEEEEEEEECC---e---EeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccc
Confidence 357889988842 2 3599999999999999999999999999999999996 7999999874
Q ss_pred -----------C-----------------------cEEEEcCC-CCCCC-cCHHHHhccCC---CCCH----HHHHHHHH
Q 000511 668 -----------G-----------------------SIAYVPQV-PWILS-GTIRDNILFGK---NYDP----QSYSETLK 704 (1455)
Q Consensus 668 -----------~-----------------------~i~y~~Q~-p~l~~-~ti~~nI~~g~---~~~~----~~~~~v~~ 704 (1455)
| .++|++|+ +.+++ .|++||+.++. .++. ++..++++
T Consensus 75 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (520)
T TIGR03269 75 PSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIE 154 (520)
T ss_pred ccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 1 28999997 56665 59999998742 1222 34555666
Q ss_pred HhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceE
Q 000511 705 ACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTR 783 (1455)
Q Consensus 705 ~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ 783 (1455)
.++++... .....+|||||||||+||||+..+|+++||||||++||+.+.+++.+. +..... .++|+
T Consensus 155 ~~gl~~~~-----------~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tv 222 (520)
T TIGR03269 155 MVQLSHRI-----------THIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA-LEEAVKASGISM 222 (520)
T ss_pred HcCChhhh-----------hcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH-HHHHHHhcCcEE
Confidence 66664332 234568999999999999999999999999999999999999998775 332112 37899
Q ss_pred EEEccCcccccc-CCEEEEEeCCeEEEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCC
Q 000511 784 ILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSV 862 (1455)
Q Consensus 784 ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (1455)
|+|||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 223 iivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~------------------------------------------- 259 (520)
T TIGR03269 223 VLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV------------------------------------------- 259 (520)
T ss_pred EEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH-------------------------------------------
Confidence 999999999864 999999999998765543221000
Q ss_pred CcchhhHHHHHHHhcCcchhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHH
Q 000511 863 SDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLC 942 (1455)
Q Consensus 863 ~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~ 942 (1455)
|. .
T Consensus 260 -------------------------~~---------------------------------~------------------- 262 (520)
T TIGR03269 260 -------------------------FM---------------------------------E------------------- 262 (520)
T ss_pred -------------------------HH---------------------------------h-------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHH
Q 000511 943 IFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVG 1022 (1455)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~ 1022 (1455)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHH
Q 000511 1023 LLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1102 (1455)
Q Consensus 1023 ~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~ 1102 (1455)
...
T Consensus 263 --------------------------------------~~~--------------------------------------- 265 (520)
T TIGR03269 263 --------------------------------------GVS--------------------------------------- 265 (520)
T ss_pred --------------------------------------hch---------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1103 HVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTET 1182 (1455)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~ 1182 (1455)
. .
T Consensus 266 --------------------------------------------~----------------------------------~ 267 (520)
T TIGR03269 266 --------------------------------------------E----------------------------------V 267 (520)
T ss_pred --------------------------------------------h----------------------------------h
Confidence 0 0
Q ss_pred HHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecC---CCCcceeeeeEEEeCCcEEEEECCCCChH
Q 000511 1183 EKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKP---SLPAALHDINFTIEGGTQVGIVGRTGAGK 1259 (1455)
Q Consensus 1183 e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~---~~~~vL~~isl~I~~GekvgIvGrtGSGK 1259 (1455)
+. .++. +. ....++++|++++|+. +..++|+|+||+|++||++||+|+|||||
T Consensus 268 ~~-------------~~~~-------~~----~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGK 323 (520)
T TIGR03269 268 EK-------------ECEV-------EV----GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGK 323 (520)
T ss_pred cc-------------cccc-------CC----CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCH
Confidence 00 0000 00 1125999999999953 23469999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEEC-CE---eCCCCC---hHHHhcccEEEeCCCCCCCC-cHHHhcCcC-C-CCChHHHHHHH
Q 000511 1260 SSILNALFRLTPICGGQILVD-GL---NIINTP---VRDLRGRFAVVPQSPFLFEG-SLRDNLDPF-H-MNDDLKIWSVL 1329 (1455)
Q Consensus 1260 STLl~~L~rl~~~~~G~I~Id-G~---di~~i~---~~~lR~~i~~VpQdp~lf~g-TIreNLdp~-~-~~~d~ei~~aL 1329 (1455)
|||+++|.|+++|++|+|.++ |. ++...+ ...+|++++|+||++.+|+. |+++|+... . ....++.
T Consensus 324 STLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~---- 399 (520)
T TIGR03269 324 TTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELA---- 399 (520)
T ss_pred HHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHH----
Confidence 999999999999999999996 64 344332 23567789999999988875 999999632 1 1111110
Q ss_pred HHhcHHHHHHhCCCch-----hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CC
Q 000511 1330 EKCHVKEEVEAVGLET-----FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KG 1402 (1455)
Q Consensus 1330 ~~~~l~~~i~~lgLdt-----~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~ 1402 (1455)
+....+.++.+|++. ........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .+
T Consensus 400 -~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g 478 (520)
T TIGR03269 400 -RMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEME 478 (520)
T ss_pred -HHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC
Confidence 111233445556643 3455566899999999999999999999999999999999999999999998764 27
Q ss_pred cEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1403 MTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1403 ~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
.|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 479 ~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 479 QTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred cEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 899999999999876 89999999999999999998864
No 59
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=3.5e-62 Score=623.31 Aligned_cols=532 Identities=19% Similarity=0.217 Sum_probs=412.5
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 269 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRS 348 (1455)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~ 348 (1455)
.++.++..++..++..++..++.++.|+++..++|.+..+.. .. .+++.++++.++..+......+...++..+++.
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKGD--IF-PLLAAWAGFGLFNIIAGVLVARHADRLAHRRRL 89 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566677778888899999999999999999998765321 11 112222222333333344445566778888888
Q ss_pred HHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHH
Q 000511 349 SIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVAL---YLLYTQVKFAFVSGLAIT 424 (1455)
Q Consensus 349 ~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~---~lL~~~lg~a~l~g~~v~ 424 (1455)
.+...+|+|.++++...+.+.+.|++.+.++.|++.+..... .+..+....+..++.+ +.+.+.+++.++ +++
T Consensus 90 ~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l---~~~ 166 (588)
T PRK13657 90 AVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLV---VLG 166 (588)
T ss_pred HHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 899999999999999888889999999999999999875432 3333333332222222 223333443333 333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 425 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 504 (1455)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 504 (1455)
++...+..++.++..+.+++.++..++..+...|.++|+++||.|+.|+.+.+++.+.-++-.+...+..........+.
T Consensus 167 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (588)
T PRK13657 167 IVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLN 246 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444566778888888889999999999999999999999999999998777766554433333322222222221211
Q ss_pred H--HHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhc
Q 000511 505 A--TTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 582 (1455)
Q Consensus 505 ~--~~~~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 582 (1455)
. .....+.++++|+|.+..+.+|++.+++++.++..+..|+..+...+..+..+..+++|+.++++.++..+....
T Consensus 247 ~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~-- 324 (588)
T PRK13657 247 RAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPG-- 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCC--
Confidence 1 112234556778888888999999999999999999999999999999999999999999999876432111000
Q ss_pred CCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCc
Q 000511 583 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 662 (1455)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G 662 (1455)
... .......|+++|++|+|+.+ . ++|+|+||+++||+.++|+|+||||||||+++|+|+++|++|
T Consensus 325 -~~~--------~~~~~~~I~~~~vsf~y~~~--~---~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G 390 (588)
T PRK13657 325 -AID--------LGRVKGAVEFDDVSFSYDNS--R---QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSG 390 (588)
T ss_pred -CCC--------cCCCCCeEEEEEEEEEeCCC--C---ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCC
Confidence 000 01123469999999999632 2 359999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCC-CCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000511 663 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1455)
Q Consensus 663 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~ 728 (1455)
+|.++| .|+||||+|++|++||||||.+++ +.++++..++++.+++++.+..+|+|.+|.+|++|.
T Consensus 391 ~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~ 470 (588)
T PRK13657 391 RILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGR 470 (588)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCC
Confidence 999987 699999999999999999999986 467888999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEE
Q 000511 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1455)
Q Consensus 729 ~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1455)
+||||||||++||||++++|+|++||||||+||+++++.+++. +.. ..+++|+|+||||++.++.||+|++|++|++.
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~-l~~-~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~ 548 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAA-LDE-LMKGRTTFIIAHRLSTVRNADRILVFDNGRVV 548 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-HhcCCEEEEEEecHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999887 333 44679999999999999999999999999999
Q ss_pred EecCHHHHHhccccCc
Q 000511 809 WIGSSADLAVSLYSGF 824 (1455)
Q Consensus 809 ~~g~~~~l~~~~~~~~ 824 (1455)
++|+++++++..+.+.
T Consensus 549 ~~g~~~~l~~~~~~y~ 564 (588)
T PRK13657 549 ESGSFDELVARGGRFA 564 (588)
T ss_pred EeCCHHHHHHCCChHH
Confidence 9999999986654443
No 60
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-64 Score=634.75 Aligned_cols=446 Identities=21% Similarity=0.324 Sum_probs=336.9
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|++++|.. . .+|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 78 (510)
T PRK09700 5 YISMAGIGKSFGP---V---HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAA 78 (510)
T ss_pred eEEEeeeEEEcCC---e---EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHH
Confidence 4789999998852 2 359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCCc-CHHHHhccCCC-----C-----CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000511 669 --SIAYVPQVPWILSG-TIRDNILFGKN-----Y-----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1455)
Q Consensus 669 --~i~y~~Q~p~l~~~-ti~~nI~~g~~-----~-----~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LS 731 (1455)
.++|++|++.++.. |++||+.++.. + +. ++..++++.+++.. .......+||
T Consensus 79 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS 147 (510)
T PRK09700 79 QLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKV-----------DLDEKVANLS 147 (510)
T ss_pred HCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCC-----------CcccchhhCC
Confidence 38999999987765 99999987531 0 11 12333444444432 1234556899
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEe
Q 000511 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1455)
Q Consensus 732 GGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1455)
|||||||+||||++.+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|++++.
T Consensus 148 gG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~ 226 (510)
T PRK09700 148 ISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLI-MNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCS 226 (510)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeee
Confidence 9999999999999999999999999999999999988876 33212347899999999999875 999999999999877
Q ss_pred cCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHHHhh
Q 000511 811 GSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAK 890 (1455)
Q Consensus 811 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~ 890 (1455)
|+++++... +.. ....+
T Consensus 227 g~~~~~~~~------------------------------------------------~~~---~~~~~------------ 243 (510)
T PRK09700 227 GMVSDVSND------------------------------------------------DIV---RLMVG------------ 243 (510)
T ss_pred cchhhCCHH------------------------------------------------HHH---HHhcC------------
Confidence 654432100 000 00000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 891 FSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKV 970 (1455)
Q Consensus 891 ~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 970 (1455)
.
T Consensus 244 ------------------------------------~------------------------------------------- 244 (510)
T PRK09700 244 ------------------------------------R------------------------------------------- 244 (510)
T ss_pred ------------------------------------C-------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000511 971 HNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSK 1050 (1455)
Q Consensus 971 h~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~ 1050 (1455)
+
T Consensus 245 -----------~-------------------------------------------------------------------- 245 (510)
T PRK09700 245 -----------E-------------------------------------------------------------------- 245 (510)
T ss_pred -----------C--------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1051 LQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAA 1130 (1455)
Q Consensus 1051 i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~ 1130 (1455)
.. .
T Consensus 246 -----------~~-----~------------------------------------------------------------- 248 (510)
T PRK09700 246 -----------LQ-----N------------------------------------------------------------- 248 (510)
T ss_pred -----------cc-----c-------------------------------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCC
Q 000511 1131 FIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLS 1210 (1455)
Q Consensus 1131 ~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~ 1210 (1455)
.. .. ..+. ..++
T Consensus 249 ----------------~~-~~----------------------------------------------~~~~-----~~~~ 260 (510)
T PRK09700 249 ----------------RF-NA----------------------------------------------MKEN-----VSNL 260 (510)
T ss_pred ----------------cc-cc----------------------------------------------cccc-----cccC
Confidence 00 00 0000 0000
Q ss_pred CCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh-
Q 000511 1211 PDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV- 1289 (1455)
Q Consensus 1211 ~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~- 1289 (1455)
+.+..++++|+++.|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.
T Consensus 261 ---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~ 333 (510)
T PRK09700 261 ---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPL 333 (510)
T ss_pred ---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHH
Confidence 0112599999998763 38999999999999999999999999999999999999999999999999876543
Q ss_pred HHHhcccEEEeCCC---CCCCC-cHHHhcCcCCCCChH------HH-HHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChh
Q 000511 1290 RDLRGRFAVVPQSP---FLFEG-SLRDNLDPFHMNDDL------KI-WSVLEKCHVKEEVEAVGLE-TFVKESGISFSVG 1357 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp---~lf~g-TIreNLdp~~~~~d~------ei-~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgG 1357 (1455)
+.+|++++||||++ .+|++ |+++|+......... .. ...-.+....+.++.+|+. .........||||
T Consensus 334 ~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG 413 (510)
T PRK09700 334 DAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGG 413 (510)
T ss_pred HHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCccccCChH
Confidence 45678999999984 57765 999998753210000 00 0000111234455555775 3455566689999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCCh
Q 000511 1358 QRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1358 QrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p 1435 (1455)
||||++|||||+++|+|||||||||+||..+.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++|++++.+++
T Consensus 414 q~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~ 493 (510)
T PRK09700 414 NQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTN 493 (510)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecC
Confidence 9999999999999999999999999999999999999998753 48899999999998865 899999999999998876
Q ss_pred hH
Q 000511 1436 QT 1437 (1455)
Q Consensus 1436 ~e 1437 (1455)
.+
T Consensus 494 ~~ 495 (510)
T PRK09700 494 RD 495 (510)
T ss_pred cc
Confidence 33
No 61
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.7e-63 Score=676.95 Aligned_cols=246 Identities=22% Similarity=0.303 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHHHhh--cCCccccccC--CCCCCCCCCCc--cEEEEEEEEEec--CCCCcceeeeeEEEeCCcEEEE
Q 000511 1180 TETEKEMVSLERVLEYM--DVPQEELCGY--QSLSPDWPFQG--LIEFQNVTMRYK--PSLPAALHDINFTIEGGTQVGI 1251 (1455)
Q Consensus 1180 ~~~e~~~~s~~Ri~~~~--~~~~e~~~~~--~~~~~~wp~~g--~I~f~nvs~~Y~--~~~~~vL~~isl~I~~GekvgI 1251 (1455)
.+.|..+.++||..++. +.+.|..... ..++. .+| .++++||+++|+ ++.+++|+|||++|+|||++||
T Consensus 718 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI 794 (1394)
T TIGR00956 718 ETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTAL 794 (1394)
T ss_pred cccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEE
Confidence 45566677889988763 2333321111 11111 134 479999999995 3345799999999999999999
Q ss_pred ECCCCChHHHHHHHHhcCCC---CCCceEEECCEeCCCCChHHHhcccEEEeCCCCC-CCCcHHHhcCcCC------CCC
Q 000511 1252 VGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL-FEGSLRDNLDPFH------MND 1321 (1455)
Q Consensus 1252 vGrtGSGKSTLl~~L~rl~~---~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~l-f~gTIreNLdp~~------~~~ 1321 (1455)
+||||||||||+++|.|+.+ |++|+|.+||.++. ..+|++++||||++.+ +..||||||++.. ..+
T Consensus 795 ~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~ 870 (1394)
T TIGR00956 795 MGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVS 870 (1394)
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999998 78899999999985 2578999999998765 4569999997421 223
Q ss_pred hHH----HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC-EEEEeccCcCCCHHHHHHHHHHH
Q 000511 1322 DLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK-VLCLDECTANVDAQTASILQNAI 1396 (1455)
Q Consensus 1322 d~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~-ILlLDEaTS~lD~~te~~I~~~i 1396 (1455)
+++ +.++++..++.+ -.|+.+++.|.+||||||||++|||||+++|+ ||+||||||+||..+...|++.|
T Consensus 871 ~~~~~~~v~~~l~~l~L~~-----~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L 945 (1394)
T TIGR00956 871 KSEKMEYVEEVIKLLEMES-----YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLM 945 (1394)
T ss_pred HHHHHHHHHHHHHHcCChh-----hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHH
Confidence 333 344555555433 25788888888999999999999999999997 99999999999999999999999
Q ss_pred HHh-cCCcEEEEeccChhhH--hhhCEEEEEeCC-eEEEeCChhH
Q 000511 1397 SSE-CKGMTVITIAHRISTV--LNMDEILILDHG-HLVEQGNPQT 1437 (1455)
Q Consensus 1397 ~~~-~~~~TvI~IaHrl~ti--~~~DrI~vl~~G-~ive~G~p~e 1437 (1455)
++. .+++|||+++|+++.. ..||+|++|++| +++++|++.+
T Consensus 946 ~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 946 RKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 887 4689999999999974 569999999997 9999999754
No 62
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.9e-62 Score=620.17 Aligned_cols=522 Identities=20% Similarity=0.238 Sum_probs=411.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000511 284 KVVNDSIGFAGPLLLNKLIKFLQQGS-GHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVR 362 (1455)
Q Consensus 284 ~l~~~~~~~~~P~ll~~li~~~~~~~-~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~ 362 (1455)
.++..++..+.|++++.++|.+.... .....+.+++.++++.++..++.....+...+.+.++...+...+|+|.++++
T Consensus 4 ~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 4 LIIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34556777889999999999875422 22223334444555566667777666777788899999999999999999999
Q ss_pred ccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 363 LAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKF-AFVSGLAITILLIPVNKWIANLIAN 440 (1455)
Q Consensus 363 ~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~i~~~lL~~~lg~-a~l~g~~v~~~~~~~~~~~~~~~~~ 440 (1455)
...+.+.+.|++.+.+++|++.+.... ..+..++..++.+++++++++..++| .+++.++++++...+..++.+++.+
T Consensus 84 ~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 84 PEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888899999999999999998654 34555565555544443333223333 2223333333344455667777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 000511 441 ATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP--TLFSLFTFGL 518 (1455)
Q Consensus 441 ~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~~f~~ 518 (1455)
..++..+..++..+.+.|.++|+++||.+++|+.+.+++.+..++..+...+.....+....+..... ..+.++.+|.
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999998887776554443433333333332222221111 2233456778
Q ss_pred HHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccCCCC
Q 000511 519 FALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSK 598 (1455)
Q Consensus 519 ~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1455)
|.+.++.+|+|.+++++.+...+..|+..+++.+..+.+++++.+||.++++.++..+... .+ .+..
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~----~~---------~~~~ 310 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS----EP---------VPEG 310 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC----CC---------CCCC
Confidence 8888899999999999999999999999999999999999999999999997653211000 00 0112
Q ss_pred CceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC----------
Q 000511 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1455)
Q Consensus 599 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 668 (1455)
+..++++|++|+|+..+ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 311 ~~~I~~~~v~~~y~~~~----~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~ 386 (569)
T PRK10789 311 RGELDVNIRQFTYPQTD----HPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDS 386 (569)
T ss_pred CCcEEEEEEEEECCCCC----CccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHH
Confidence 34689999999997431 2359999999999999999999999999999999999999999999876
Q ss_pred ---cEEEEcCCCCCCCcCHHHHhccCC-CCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHH
Q 000511 669 ---SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 744 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARal 744 (1455)
.++||+|+|++|++|++|||.++. +.+++++.++++.+++++++..+|+|++|.+|++|.+||||||||++||||+
T Consensus 387 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARal 466 (569)
T PRK10789 387 WRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARAL 466 (569)
T ss_pred HHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHH
Confidence 489999999999999999999985 4788899999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHhccccCc
Q 000511 745 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGF 824 (1455)
Q Consensus 745 y~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~ 824 (1455)
+++|+++|||||||+||+++++.+.+. +.. ..+++|+|++||+++.++.||+|++|++|+++++|+++++.+..+.+.
T Consensus 467 l~~~~illlDEpts~LD~~~~~~i~~~-l~~-~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~ 544 (569)
T PRK10789 467 LLNAEILILDDALSAVDGRTEHQILHN-LRQ-WGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYR 544 (569)
T ss_pred hcCCCEEEEECccccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHH
Confidence 999999999999999999999999887 433 456899999999999999999999999999999999999987654443
No 63
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.2e-62 Score=673.17 Aligned_cols=547 Identities=19% Similarity=0.200 Sum_probs=393.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 883 TVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFG 962 (1455)
Q Consensus 883 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 962 (1455)
+..+..++..++..+... +..++...+....++.++..++.....+.......|+.++++..++..++.....+.....
T Consensus 290 ~l~~~l~~~~~~~~~~~~-~~~i~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (1495)
T PLN03232 290 WLLRALNNSLGGRFWLGG-IFKIGHDLSQFVGPVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRV 368 (1495)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555554444333 3345555566666666666554322111111111122222222222222221122223566
Q ss_pred HHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 000511 963 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1042 (1455)
Q Consensus 963 ~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 1042 (1455)
+.+....+...+++++++.|..++++.++|+++||+++|++.+++.. ..+..+....+.++..++++.....+..++.+
T Consensus 369 ~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~ 447 (1495)
T PLN03232 369 GFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLGVASLFGS 447 (1495)
T ss_pred HHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 77777788889999999999999999999999999999999998875 33433333333333333332221111112122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1043 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1122 (1455)
Q Consensus 1043 p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~ 1122 (1455)
++++++..+..++.+..+..++.....+....+.+.|.++|+++||+|+||+.+.+++.+..+...+..........+..
T Consensus 448 ~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~ 527 (1495)
T PLN03232 448 LILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNS 527 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222233333444444444455556677899999999999999999999999998877666555444433333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccc
Q 000511 1123 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1202 (1455)
Q Consensus 1123 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~ 1202 (1455)
........ ++.++.+...... .+..++|.+..++++...+..++..+...+..+..+..|.+|+.++++.+++.
T Consensus 528 ~~~~~~~~-~~~~~~fg~~~v~-----~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~ 601 (1495)
T PLN03232 528 FILNSIPV-VVTLVSFGVFVLL-----GGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERI 601 (1495)
T ss_pred HHHHHHHH-HHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 21111111 1111111111111 23467888989999999999999999999999999999999999999766542
Q ss_pred cccCCCCCCCCCCCccEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECC
Q 000511 1203 LCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDG 1281 (1455)
Q Consensus 1203 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG 1281 (1455)
.... + +..+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+.
T Consensus 602 ~~~~--~-~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~--- 675 (1495)
T PLN03232 602 LAQN--P-PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV--- 675 (1495)
T ss_pred cccc--C-CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE---
Confidence 1111 1 111234679999999999753 46799999999999999999999999999999999999999999763
Q ss_pred EeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHH
Q 000511 1282 LNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQR 1359 (1455)
Q Consensus 1282 ~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQr 1359 (1455)
.+|++++||||+|++|+|||||||.++.++++++++++++.|++.+.++.+ |+||.+||+|.+||||||
T Consensus 676 ---------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQk 746 (1495)
T PLN03232 676 ---------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQK 746 (1495)
T ss_pred ---------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHH
Confidence 368899999999999999999999999888999999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHH-HHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHH
Q 000511 1360 QLICLARALLKSSKVLCLDECTANVDAQTASILQ-NAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1360 Qrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~-~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eL 1438 (1455)
|||+||||++++|+|+|||||||+||++|++.|. +.++...+++|+|+||||++++..||+|++|++|+|+|.|+|+||
T Consensus 747 QRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL 826 (1495)
T PLN03232 747 QRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAEL 826 (1495)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHH
Confidence 9999999999999999999999999999999774 557766789999999999999999999999999999999999999
Q ss_pred hccCCcHHHHHHHhh
Q 000511 1439 LQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1439 l~~~~s~f~~l~~~~ 1453 (1455)
+++ ++.|+++++..
T Consensus 827 ~~~-~~~~~~l~~~~ 840 (1495)
T PLN03232 827 SKS-GSLFKKLMENA 840 (1495)
T ss_pred Hhc-chhHHHHHHhc
Confidence 985 46899988754
No 64
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.6e-64 Score=631.79 Aligned_cols=436 Identities=21% Similarity=0.309 Sum_probs=335.2
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|++++|.. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~i~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~ 77 (501)
T PRK10762 4 LLQLKGIDKAFPG---V---KALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQ 77 (501)
T ss_pred eEEEeeeEEEeCC---e---EEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHH
Confidence 4789999998852 2 359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCCc-CHHHHhccCCC-------CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000511 669 --SIAYVPQVPWILSG-TIRDNILFGKN-------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1455)
Q Consensus 669 --~i~y~~Q~p~l~~~-ti~~nI~~g~~-------~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQ 734 (1455)
.++|++|+|.++.. |++||+.++.. ++.+ +..++++.+++.. .......+|||||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~ 146 (501)
T PRK10762 78 EAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRF-----------SSDKLVGELSIGE 146 (501)
T ss_pred hCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCC-----------CccCchhhCCHHH
Confidence 38999999987754 99999998642 1222 2333444444322 1234456899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCH
Q 000511 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 813 (1455)
Q Consensus 735 kqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~ 813 (1455)
||||+||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|+++..|+.
T Consensus 147 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~ 225 (501)
T PRK10762 147 QQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRV-IRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREV 225 (501)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCc
Confidence 9999999999999999999999999999999988765 32212347899999999998864 999999999999876543
Q ss_pred HHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHHHhhhhh
Q 000511 814 ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG 893 (1455)
Q Consensus 814 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 893 (1455)
+++.. ++.
T Consensus 226 ~~~~~-----------------------------------------------------~~~------------------- 233 (501)
T PRK10762 226 ADLTE-----------------------------------------------------DSL------------------- 233 (501)
T ss_pred CcCCH-----------------------------------------------------HHH-------------------
Confidence 22100 000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 894 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 973 (1455)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 973 (1455)
...+...
T Consensus 234 ------------------------~~~~~~~------------------------------------------------- 240 (501)
T PRK10762 234 ------------------------IEMMVGR------------------------------------------------- 240 (501)
T ss_pred ------------------------HHHhcCC-------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 974 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1053 (1455)
Q Consensus 974 ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~ 1053 (1455)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1054 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1133 (1455)
Q Consensus 1054 ~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 1133 (1455)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCC
Q 000511 1134 SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW 1213 (1455)
Q Consensus 1134 ~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~w 1213 (1455)
.. . ..++.. ..+
T Consensus 241 -------------~~-~----------------------------------------------~~~~~~-----~~~--- 252 (501)
T PRK10762 241 -------------KL-E----------------------------------------------DQYPRL-----DKA--- 252 (501)
T ss_pred -------------Cc-c----------------------------------------------cccccc-----ccC---
Confidence 00 0 000000 000
Q ss_pred CCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh-HHH
Q 000511 1214 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDL 1292 (1455)
Q Consensus 1214 p~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~-~~l 1292 (1455)
|.+-.|+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+
T Consensus 253 ~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~ 325 (501)
T PRK10762 253 PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGL 325 (501)
T ss_pred CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHH
Confidence 0112588999974 37999999999999999999999999999999999999999999999999987664 356
Q ss_pred hcccEEEeCCC---CCCC-CcHHHhcCcCCC---------CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhH
Q 000511 1293 RGRFAVVPQSP---FLFE-GSLRDNLDPFHM---------NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQ 1358 (1455)
Q Consensus 1293 R~~i~~VpQdp---~lf~-gTIreNLdp~~~---------~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQ 1358 (1455)
|++++||||+| .+|. -|+++|+..... .+..+ .+....+.++.+|++ ...+.....|||||
T Consensus 326 ~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSgGe 400 (501)
T PRK10762 326 ANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHAD-----EQQAVSDFIRLFNIKTPSMEQAIGLLSGGN 400 (501)
T ss_pred HCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHH-----HHHHHHHHHHhcCCCCCCccCchhhCCHHH
Confidence 78899999997 3554 599999964210 01111 111234455555774 34566667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChh
Q 000511 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1436 (1455)
Q Consensus 1359 rQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~ 1436 (1455)
|||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 401 kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~ 480 (501)
T PRK10762 401 QQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEFTRE 480 (501)
T ss_pred HHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccc
Confidence 999999999999999999999999999999999999998864 47899999999999876 8999999999999999988
Q ss_pred HHh
Q 000511 1437 TLL 1439 (1455)
Q Consensus 1437 eLl 1439 (1455)
++.
T Consensus 481 ~~~ 483 (501)
T PRK10762 481 QAT 483 (501)
T ss_pred cCC
Confidence 764
No 65
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=8.6e-63 Score=564.88 Aligned_cols=530 Identities=20% Similarity=0.271 Sum_probs=447.8
Q ss_pred cchHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 263 PSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKL 342 (1455)
Q Consensus 263 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 342 (1455)
.....+.+..++..|+..+++..+.+++.++.|+++-++.|.+-.+.+......+.+....+|+++.+++..+.+...|+
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Ri 90 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRI 90 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778888888999999999999999999999999999998877777778888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000511 343 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-----NSFHDAWSLPFQIGVALYLLYTQVKFAF 417 (1455)
Q Consensus 343 ~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-----~~~~~~~~~pl~i~i~~~lL~~~lg~a~ 417 (1455)
+.++...|...||.-+++.+..........+.+ .|.+.+..+. ..+.+..+.|+.+++ +|+++..+|+.+
T Consensus 91 g~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v-~fl~Hp~lG~~a 165 (580)
T COG4618 91 GERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAV-IFLFHPWLGLIA 165 (580)
T ss_pred HHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHH-HHHHHHHHHHHH
Confidence 999999999999999976655433222122222 3666666544 357788889998877 789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 418 VSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLD 497 (1455)
Q Consensus 418 l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~ 497 (1455)
++|.++++.+..+|-++++ +..++..+..-+|....+..++|..+|+.+|+.+...+++.+.....++...+.....
T Consensus 166 ~~ga~iLv~la~ln~~~t~---~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~ 242 (580)
T COG4618 166 LAGAIILVVLALLNERATR---KPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRN 242 (580)
T ss_pred HHHHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999888888877766665 5567778888899999999999999999999999999999888776666655444333
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 000511 498 AWCVFFWATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYK 575 (1455)
Q Consensus 498 ~~~~~~~~~~~~~--~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~ 575 (1455)
.....+.-..-.+ +.++..|+|++.++++|+|.++++-.+......|+......+.++..|+.|++|++++|......
T Consensus 243 ~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~ 322 (580)
T COG4618 243 GAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAA 322 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 3332222222222 34567788999999999999999999999999999999999999999999999999999653222
Q ss_pred hhhhhhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhc
Q 000511 576 HELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILG 655 (1455)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g 655 (1455)
.+.. ..+.++..+.++++++.-|.. + +++++|+||++++|+-++||||||||||||.++|.|
T Consensus 323 ~~~m--------------~LP~P~g~L~Ve~l~~~PPg~-~---~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG 384 (580)
T COG4618 323 AERM--------------PLPAPQGALSVERLTAAPPGQ-K---KPILKGISFALQAGEALGIIGPSGSGKSTLARLLVG 384 (580)
T ss_pred cCCC--------------CCCCCCceeeEeeeeecCCCC-C---CcceecceeEecCCceEEEECCCCccHHHHHHHHHc
Confidence 1110 112456778899999965432 2 456999999999999999999999999999999999
Q ss_pred CccCCCcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhc-cCCCCCHHHHHHHHHHhcchHHHhhccCCCcc
Q 000511 656 EMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNIL-FGKNYDPQSYSETLKACTLDVDISLMVGGDMA 721 (1455)
Q Consensus 656 ~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~-~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t 721 (1455)
..+|.+|+|++|| +|||.||+..||.|||+|||. |+.+.|+++.-++.++.+.++-|..+|+|++|
T Consensus 385 ~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT 464 (580)
T COG4618 385 IWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDT 464 (580)
T ss_pred ccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccC
Confidence 9999999999987 699999999999999999995 88899999999999999999999999999999
Q ss_pred cccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEE
Q 000511 722 YIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVV 801 (1455)
Q Consensus 722 ~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~ 801 (1455)
.||+.|.+|||||||||+||||+|.+|.+++||||.|+||.+-+..+.+. +.....+|.|+|+||||++.+..+|+|++
T Consensus 465 ~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~A-i~~~k~rG~~vvviaHRPs~L~~~Dkilv 543 (580)
T COG4618 465 RIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAA-ILAAKARGGTVVVIAHRPSALASVDKILV 543 (580)
T ss_pred ccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHH-HHHHHHcCCEEEEEecCHHHHhhcceeee
Confidence 99999999999999999999999999999999999999999988877765 55546788999999999999999999999
Q ss_pred EeCCeEEEecCHHHHHhc
Q 000511 802 MDKGQVKWIGSSADLAVS 819 (1455)
Q Consensus 802 l~~G~i~~~g~~~~l~~~ 819 (1455)
|++|++...|+.+|+.++
T Consensus 544 l~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 544 LQDGRIAAFGPREEVLAK 561 (580)
T ss_pred ecCChHHhcCCHHHHHHH
Confidence 999999999999998764
No 66
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.6e-62 Score=668.12 Aligned_cols=470 Identities=20% Similarity=0.227 Sum_probs=364.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 000511 960 AFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLL 1039 (1455)
Q Consensus 960 ~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l 1039 (1455)
...+.+....+...+++++++.|..++++.++|+++|++++|++.+++... .+..+....+.++..++++.....+..+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l 444 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASL 444 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777788899999999999999999999999999999999998764 3444444444444333333332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1040 LLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASL 1119 (1455)
Q Consensus 1040 ~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1119 (1455)
+.++++++...++.++.+..+..++.....+....+.+.|.++|+++||+|+||+.|.+++.+..+...+..........
T Consensus 445 ~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~ 524 (1622)
T PLN03130 445 IGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSA 524 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222233333333444444444444555666777899999999999999999999999998876665443333222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 000511 1120 WLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVP 1199 (1455)
Q Consensus 1120 wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~ 1199 (1455)
+.......... ++.++.+...... .+..++|.+..++++...+..++..+...+..+..+..|.+|+.++++.+
T Consensus 525 ~~~~~~~~~~~-~v~~~~fg~~~~~-----~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~ 598 (1622)
T PLN03130 525 FNSFILNSIPV-LVTVVSFGVFTLL-----GGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAE 598 (1622)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 22221111111 1111111111111 23467888888888888888999999999999999999999999999765
Q ss_pred ccccccCCCCCCCCCCCccEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCC-ceE
Q 000511 1200 QEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG-GQI 1277 (1455)
Q Consensus 1200 ~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~-G~I 1277 (1455)
++.... . ++ .-+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++ |+|
T Consensus 599 e~~~~~-~-~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I 675 (1622)
T PLN03130 599 ERVLLP-N-PP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASV 675 (1622)
T ss_pred cccccc-C-Cc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceE
Confidence 432111 1 11 11224579999999999753 3579999999999999999999999999999999999999999 999
Q ss_pred EECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCC
Q 000511 1278 LVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFS 1355 (1455)
Q Consensus 1278 ~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LS 1355 (1455)
.+ |++++||||+|++|+|||||||.++.++++++++++++.|+|.+.++.+ |++|.+||+|.+||
T Consensus 676 ~l-------------~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LS 742 (1622)
T PLN03130 676 VI-------------RGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNIS 742 (1622)
T ss_pred EE-------------cCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCC
Confidence 74 7799999999999999999999999889999999999999999999999 99999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHH-HHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCC
Q 000511 1356 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASIL-QNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGN 1434 (1455)
Q Consensus 1356 gGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I-~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~ 1434 (1455)
|||||||+||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|++|+|+|.|+
T Consensus 743 GGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt 822 (1622)
T PLN03130 743 GGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGT 822 (1622)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCC
Confidence 9999999999999999999999999999999999876 567777778999999999999999999999999999999999
Q ss_pred hhHHhccCCcHHHHHHHhh
Q 000511 1435 PQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1435 p~eLl~~~~s~f~~l~~~~ 1453 (1455)
|+||+++ ++.|+++++..
T Consensus 823 ~~eL~~~-~~~~~~l~~~~ 840 (1622)
T PLN03130 823 YEELSNN-GPLFQKLMENA 840 (1622)
T ss_pred HHHHHhc-chhHHHHHHhc
Confidence 9999975 46899988754
No 67
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.3e-61 Score=615.50 Aligned_cols=527 Identities=23% Similarity=0.288 Sum_probs=417.7
Q ss_pred HhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 273 YGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMT 352 (1455)
Q Consensus 273 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~ 352 (1455)
++ .++...++.++..++....|.++..+++.+.. .......+...+++++++..++.....+...+.+.++...+..
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~ 89 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA--DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRR 89 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 77778888889999999999999999988762 1222233334444445556666666667777777999999999
Q ss_pred HHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHH
Q 000511 353 IIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWS-LPFQIGVALYLL---YTQVKFAFVSGLAITILLI 428 (1455)
Q Consensus 353 ~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~-~pl~i~i~~~lL---~~~lg~a~l~g~~v~~~~~ 428 (1455)
.+|+|.++++...+++...|++++.++.|++.+............ .++.++..+.++ .+.+++..+.+ .+++.
T Consensus 90 ~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~ 166 (567)
T COG1132 90 DLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLI---LPLLA 166 (567)
T ss_pred HHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHH
Confidence 999999999999888888999999999999999987766422222 333333222222 22333333332 23333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
Q 000511 429 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW--AT 506 (1455)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~--~~ 506 (1455)
....++.++..+..++..+..++..+.+.|.++|++.||.++.|+...++..+..++..+...+............ ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (567)
T COG1132 167 LVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLS 246 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666888888888999999999999999999999999998766666554444443333222222222111 12
Q ss_pred HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCC
Q 000511 507 TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 586 (1455)
Q Consensus 507 ~~~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~ 586 (1455)
.-....++.++.+.+..+.+++|.+.+++.++..+..|+..+...+..+..+..+.+|+.++++.++....... +
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~----~- 321 (567)
T COG1132 247 SLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPD----P- 321 (567)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC----C-
Confidence 22233455667777778889999999999999999999999999999999999999999999987442111000 0
Q ss_pred cccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEE
Q 000511 587 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 666 (1455)
Q Consensus 587 ~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~ 666 (1455)
.......|+++|++|+|+++ +++|+|+||++++||.++||||+||||||++++|+|+++|++|+|.+
T Consensus 322 --------~~~~~~~I~f~~vsf~y~~~-----~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~i 388 (567)
T COG1132 322 --------LKDTIGSIEFENVSFSYPGK-----KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILI 388 (567)
T ss_pred --------CCCCCCeEEEEEEEEEcCCC-----CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEE
Confidence 01234569999999999742 23599999999999999999999999999999999999999999999
Q ss_pred cC-------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000511 667 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 667 ~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSG 732 (1455)
+| +||||||+|+||++||+|||.+|++ .++++..++++.+++++.++.+|+|++|.+||+|.+|||
T Consensus 389 dg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSg 468 (567)
T COG1132 389 DGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSG 468 (567)
T ss_pred CCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCH
Confidence 86 5999999999999999999999987 688899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecC
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 812 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 812 (1455)
|||||++||||++++|+|++||||||+||+++++.|.+. +.. +.++||+|+|+||++.+..||+|++|++|+|++.|+
T Consensus 469 GQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~-l~~-l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~ 546 (567)
T COG1132 469 GQRQRLAIARALLRNPPILILDEATSALDTETEALIQDA-LKK-LLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGT 546 (567)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHH-HHH-HhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999999999999999999999887 433 457789999999999999999999999999999999
Q ss_pred HHHHHhccccCcc
Q 000511 813 SADLAVSLYSGFW 825 (1455)
Q Consensus 813 ~~~l~~~~~~~~~ 825 (1455)
|+||+++.+.+.+
T Consensus 547 h~eLl~~~g~y~~ 559 (567)
T COG1132 547 HEELLAKGGLYAR 559 (567)
T ss_pred HHHHHHcCCHHHH
Confidence 9999987655544
No 68
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=4.6e-64 Score=627.89 Aligned_cols=451 Identities=22% Similarity=0.355 Sum_probs=343.8
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|+++.|.. +.+|+|+||++++|++++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 10 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 83 (510)
T PRK15439 10 PLLCARSISKQYSG------VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKA 83 (510)
T ss_pred ceEEEEeEEEEeCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHH
Confidence 35899999999853 2359999999999999999999999999999999999999999999875
Q ss_pred ---cEEEEcCCCCCCCc-CHHHHhccCCCCC---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 669 ---SIAYVPQVPWILSG-TIRDNILFGKNYD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~~---~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
.++|++|++.++.. |++||+.++.... +++..++++..++... ......+|||||||||+||
T Consensus 84 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la 152 (510)
T PRK15439 84 HQLGIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLD-----------LDSSAGSLEVADRQIVEIL 152 (510)
T ss_pred HhCCEEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcc-----------ccCChhhCCHHHHHHHHHH
Confidence 38999999987765 9999999875322 2344555666655422 2344568999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHHHhcc
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVSL 820 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~~~ 820 (1455)
||++.+|+++||||||++||+...+++.+. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 153 ~aL~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (510)
T PRK15439 153 RGLMRDSRILILDEPTASLTPAETERLFSR-IRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD 231 (510)
T ss_pred HHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH
Confidence 999999999999999999999999988876 33312347899999999998864 9999999999999887765531100
Q ss_pred ccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHHHhhhhhHHHHHHH
Q 000511 821 YSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITLVI 900 (1455)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~ 900 (1455)
. ... +.
T Consensus 232 ------------------------------------------------~---~~~------------~~----------- 237 (510)
T PRK15439 232 ------------------------------------------------I---IQA------------IT----------- 237 (510)
T ss_pred ------------------------------------------------H---HHH------------Hh-----------
Confidence 0 000 00
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000511 901 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 980 (1455)
Q Consensus 901 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 980 (1455)
.. . ..
T Consensus 238 ----------------------~~---~-~~------------------------------------------------- 242 (510)
T PRK15439 238 ----------------------PA---A-RE------------------------------------------------- 242 (510)
T ss_pred ----------------------Cc---c-cc-------------------------------------------------
Confidence 00 0 00
Q ss_pred CcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 981 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1060 (1455)
Q Consensus 981 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr 1060 (1455)
.
T Consensus 243 -------------------------------------------------------------------------------~ 243 (510)
T PRK15439 243 -------------------------------------------------------------------------------K 243 (510)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred HHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1061 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1140 (1455)
Q Consensus 1061 ~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1140 (1455)
+.+.. .+.
T Consensus 244 ~~~~~------------------------------------------~~~------------------------------ 251 (510)
T PRK15439 244 SLSAS------------------------------------------QKL------------------------------ 251 (510)
T ss_pred ccccc------------------------------------------ccc------------------------------
Confidence 00000 000
Q ss_pred HHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEE
Q 000511 1141 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIE 1220 (1455)
Q Consensus 1141 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~ 1220 (1455)
. . ..+..+. ..+ +.+-.|+
T Consensus 252 ------~--~----------------------------------------------~~~~~~~----~~~---~~~~~l~ 270 (510)
T PRK15439 252 ------W--L----------------------------------------------ELPGNRR----QQA---AGAPVLT 270 (510)
T ss_pred ------c--c----------------------------------------------ccccccc----ccC---CCCceEE
Confidence 0 0 0000000 000 0112589
Q ss_pred EEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHH-HhcccEEE
Q 000511 1221 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRFAVV 1299 (1455)
Q Consensus 1221 f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~-lR~~i~~V 1299 (1455)
++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|++++|+
T Consensus 271 ~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v 343 (510)
T PRK15439 271 VEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYL 343 (510)
T ss_pred EeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEEC
Confidence 999983 2699999999999999999999999999999999999999999999999998776654 46789999
Q ss_pred eCCC---CCCCC-cHHHhcCcC--C---CC-ChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1300 PQSP---FLFEG-SLRDNLDPF--H---MN-DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1300 pQdp---~lf~g-TIreNLdp~--~---~~-~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
||++ .+|+. |+++|+... . .. ...+ ++..+.+.++.+|++ .........||||||||++||||+
T Consensus 344 ~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrl~la~al 418 (510)
T PRK15439 344 PEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAR-----ENAVLERYRRALNIKFNHAEQAARTLSGGNQQKVLIAKCL 418 (510)
T ss_pred CCChhhCCccCCCcHHHHHHhhhhhhhccccChHH-----HHHHHHHHHHHcCCCCCCccCccccCCcHHHHHHHHHHHH
Confidence 9996 36654 999998432 1 00 1111 112234555666775 456666678999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||||++|++|+++..|+++++..+
T Consensus 419 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~~ 493 (510)
T PRK15439 419 EASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAINVD 493 (510)
T ss_pred hhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccCCHH
Confidence 99999999999999999999999999998763 48999999999999976 899999999999999999887644
No 69
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=6.4e-64 Score=627.17 Aligned_cols=447 Identities=22% Similarity=0.298 Sum_probs=333.2
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC--CCcEEEEcC-----------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML--THGSIHASG----------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~--~~G~i~~~~----------- 668 (1455)
++++|++++|.. . ++|+|+||++++|++++|+||||||||||+++|+|..+| ++|+|.++|
T Consensus 2 l~i~~l~~~~~~---~---~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~ 75 (500)
T TIGR02633 2 LEMKGIVKTFGG---V---KALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDT 75 (500)
T ss_pred EEEEeEEEEeCC---e---EeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHH
Confidence 578899998852 2 359999999999999999999999999999999999986 799999865
Q ss_pred ---cEEEEcCCCCCCCc-CHHHHhccCCCC-------CHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000511 669 ---SIAYVPQVPWILSG-TIRDNILFGKNY-------DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~-------~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGG 733 (1455)
.++|++|+|.++.. |++||+.++..+ +.+ +..++++.+++.... + .....+||||
T Consensus 76 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~----~~~~~~LSgG 145 (500)
T TIGR02633 76 ERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN------V----TRPVGDYGGG 145 (500)
T ss_pred HhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc------c----cCchhhCCHH
Confidence 38999999987765 999999876421 211 233344444332110 1 1235589999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecC
Q 000511 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 812 (1455)
Q Consensus 734 QkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 812 (1455)
|||||+||||++.+|+++||||||++||+...+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+
T Consensus 146 ~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~ 224 (500)
T TIGR02633 146 QQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDI-IRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKD 224 (500)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecC
Confidence 99999999999999999999999999999999988876 33212357899999999999875 99999999999875442
Q ss_pred HHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHHHhhhh
Q 000511 813 SADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFS 892 (1455)
Q Consensus 813 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~ 892 (1455)
.+++. . . . ....+
T Consensus 225 ~~~~~------------------------------------------------~-----~--------~--~~~~~---- 237 (500)
T TIGR02633 225 MSTMS------------------------------------------------E-----D--------D--IITMM---- 237 (500)
T ss_pred cccCC------------------------------------------------H-----H--------H--HHHHH----
Confidence 11000 0 0 0 00000
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 893 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 972 (1455)
Q Consensus 893 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~ 972 (1455)
..
T Consensus 238 -----------------------------~~------------------------------------------------- 239 (500)
T TIGR02633 238 -----------------------------VG------------------------------------------------- 239 (500)
T ss_pred -----------------------------hC-------------------------------------------------
Confidence 00
Q ss_pred HHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 973 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1052 (1455)
Q Consensus 973 ~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~ 1052 (1455)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T TIGR02633 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1053 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFI 1132 (1455)
Q Consensus 1053 ~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~ 1132 (1455)
+
T Consensus 240 -----------------~-------------------------------------------------------------- 240 (500)
T TIGR02633 240 -----------------R-------------------------------------------------------------- 240 (500)
T ss_pred -----------------c--------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCC
Q 000511 1133 ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPD 1212 (1455)
Q Consensus 1133 ~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~ 1212 (1455)
. .. . ..+.+. .+
T Consensus 241 --------------~--~~---~-----------------------------------------~~~~~~-----~~--- 252 (500)
T TIGR02633 241 --------------E--IT---S-----------------------------------------LYPHEP-----HE--- 252 (500)
T ss_pred --------------c--cc---c-----------------------------------------cccccc-----cC---
Confidence 0 00 0 000000 00
Q ss_pred CCCCccEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-CCceEEECCEeCCCCC-h
Q 000511 1213 WPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-CGGQILVDGLNIINTP-V 1289 (1455)
Q Consensus 1213 wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-~~G~I~IdG~di~~i~-~ 1289 (1455)
+.+-.|+++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+ .
T Consensus 253 -~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~ 331 (500)
T TIGR02633 253 -IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPA 331 (500)
T ss_pred -CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHH
Confidence 011258999999999432 24699999999999999999999999999999999999995 8999999999987544 3
Q ss_pred HHHhcccEEEeCCC---CCCC-CcHHHhcCcCCC--CCh-HHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHH
Q 000511 1290 RDLRGRFAVVPQSP---FLFE-GSLRDNLDPFHM--NDD-LKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQL 1361 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp---~lf~-gTIreNLdp~~~--~~d-~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQr 1361 (1455)
..+|++++++||++ .+|+ .|+++|+..... ... ..+...-.+....+.++.+|+.. ........||||||||
T Consensus 332 ~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGqkqr 411 (500)
T TIGR02633 332 QAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIGRLSGGNQQK 411 (500)
T ss_pred HHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccccCCHHHHHH
Confidence 56788999999996 3666 499999975311 000 00000111122334455556642 3444556799999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHH
Q 000511 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1362 l~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eL 1438 (1455)
++||||++++|++|||||||++||..+.+.+++.|++.. ++.|||+|||+++.+.. ||||++|++|+++..++.+++
T Consensus 412 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 412 AVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred HHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 999999999999999999999999999999999988753 47899999999999876 899999999999988766554
No 70
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.5e-61 Score=652.02 Aligned_cols=220 Identities=22% Similarity=0.322 Sum_probs=187.2
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcc
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1295 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~ 1295 (1455)
...|+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++.+ +.+..|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34699999999997533579999999999999999999999999999999999999999999999999965 45677899
Q ss_pred cEEEeCCCCCCCC-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1296 FAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1296 i~~VpQdp~lf~g-TIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
|||+||++.+++. |+||||..+. ..+++++.+. ..+.++.+||+...+.....||||||||+++||||+.+
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~-----v~~lLe~lgL~~~~dk~~~~LSGGqKqRLslA~ALi~~ 2088 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKV-----ANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGC 2088 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999998875 9999996532 1222222211 12334445665555556668999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
|+||+|||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 2089 P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2089 PPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 99999999999999999999999998853 58999999999999976 999999999999999999999754
No 71
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=3e-61 Score=608.02 Aligned_cols=507 Identities=21% Similarity=0.211 Sum_probs=400.0
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 274 GYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMT 352 (1455)
Q Consensus 274 ~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~ 352 (1455)
++.++..+++.++..++..+.|++++.++|.+. +.......+.+++.++++.++..++.....+...+++.++...+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677788889999999999999999999874 3222223334455555666777788888888889999999999999
Q ss_pred HHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHHHHHHH
Q 000511 353 IIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYL---LYTQVKFAFVSGLAITILLI 428 (1455)
Q Consensus 353 ~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~l---L~~~lg~a~l~g~~v~~~~~ 428 (1455)
.+|+|.++++...+.+.++|++++.++.|++++.+... .+..+....+.+++++.+ +.+.+++..++++ ++..
T Consensus 82 ~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~---~l~~ 158 (529)
T TIGR02857 82 RLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTA---PLIP 158 (529)
T ss_pred HHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH---HHHH
Confidence 99999999999988889999999999999999987554 345555444444333322 2233333333222 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 429 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP 508 (1455)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~ 508 (1455)
.+..++.++..+..++.++..+++.+.+.|.++|+++||.|++|+.+.+++++.-++..+...+..........+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02857 159 IFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFA 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23355677777888888899999999999999999999999999998888876654444433333333333222222222
Q ss_pred HHH--HHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCC
Q 000511 509 TLF--SLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 586 (1455)
Q Consensus 509 ~~~--~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~ 586 (1455)
.+. .++.++.+.+..+.++++.+++++.+...+..|+..+...+..+.++..+++|+.++++.++...... ..+
T Consensus 239 ~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~- 314 (529)
T TIGR02857 239 TLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVT- 314 (529)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCC-
Confidence 121 12234445555778999999999999999999999999999999999999999999997442111000 000
Q ss_pred cccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEE
Q 000511 587 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 666 (1455)
Q Consensus 587 ~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~ 666 (1455)
......++++|++|+|+..+ +++|+|+||++++|+.++|+||+|||||||+++|+|+++|++|+|.+
T Consensus 315 ---------~~~~~~i~~~~v~f~y~~~~----~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~ 381 (529)
T TIGR02857 315 ---------AAPAPSLEFSGLSVAYPGRR----APALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAV 381 (529)
T ss_pred ---------CCCCCeEEEEEEEEECCCCC----cccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 01124699999999997431 24599999999999999999999999999999999999999999999
Q ss_pred cC-------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000511 667 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 667 ~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSG 732 (1455)
+| .++||+|+|++|++||||||.++.+ .++++..++++.++++++++.+|+|++|.+||+|.+|||
T Consensus 382 ~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSg 461 (529)
T TIGR02857 382 NGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSG 461 (529)
T ss_pred CCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCH
Confidence 86 4999999999999999999999864 678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEE
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVM 802 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l 802 (1455)
|||||++||||++++|++++||||||+||+++++.+.+. +.. ..+++|+|+||||++.++.||+|++|
T Consensus 462 Gq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~-l~~-~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 462 GQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEA-LRA-LAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999999999999887 444 45789999999999999999999975
No 72
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-62 Score=618.78 Aligned_cols=202 Identities=19% Similarity=0.300 Sum_probs=171.1
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| ++++
T Consensus 318 ~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 384 (530)
T PRK15064 318 NALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANI 384 (530)
T ss_pred ceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEE
Confidence 36999999999964 3699999999999999999999999999999999999999999999987 3579
Q ss_pred EEEeCCCC--CCC-CcHHHhcCcCCC--CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1297 AVVPQSPF--LFE-GSLRDNLDPFHM--NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1297 ~~VpQdp~--lf~-gTIreNLdp~~~--~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
+|+||++. +++ .|+++|+..... ..++++.+.++.. |+. .........||||||||++||||+++
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~~LSgGq~qrv~la~al~~ 455 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRL---------LFSQDDIKKSVKVLSGGEKGRMLFGKLMMQ 455 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHc---------CCChhHhcCcccccCHHHHHHHHHHHHHhc
Confidence 99999984 443 599999864321 1233344444444 453 33455567899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEE-EeCChhHHhccC
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-EQGNPQTLLQDE 1442 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv-e~G~p~eLl~~~ 1442 (1455)
+|+||||||||++||+.+.+.+.+.|++. +.|||+|||+++.+.. ||||++|++|+++ +.|+++++++.+
T Consensus 456 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~~ 527 (530)
T PRK15064 456 KPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRSQ 527 (530)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHHh
Confidence 99999999999999999999999999876 4699999999999876 8999999999998 789999987653
No 73
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-63 Score=622.53 Aligned_cols=443 Identities=21% Similarity=0.281 Sum_probs=333.7
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~ 77 (501)
T PRK11288 4 YLSFDGIGKTFPG---V---KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAAL 77 (501)
T ss_pred eEEEeeeEEEECC---E---EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHH
Confidence 4789999999853 2 359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCCc-CHHHHhccCCC------CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000511 669 --SIAYVPQVPWILSG-TIRDNILFGKN------YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1455)
Q Consensus 669 --~i~y~~Q~p~l~~~-ti~~nI~~g~~------~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQk 735 (1455)
.++|++|+|.++.. |++||+.++.. .+. ++..++++.+++... ......+||||||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGq~ 146 (501)
T PRK11288 78 AAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDID-----------PDTPLKYLSIGQR 146 (501)
T ss_pred hCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCC-----------cCCchhhCCHHHH
Confidence 48999999988765 99999988631 122 233444555544311 2345568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHH
Q 000511 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 814 (1455)
Q Consensus 736 qRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~ 814 (1455)
|||+||||+..+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..++..
T Consensus 147 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 225 (501)
T PRK11288 147 QMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRV-IRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDM 225 (501)
T ss_pred HHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCcc
Confidence 999999999999999999999999999999988876 33212347899999999998865 9999999999987533100
Q ss_pred HHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHHHhhhhhH
Q 000511 815 DLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGW 894 (1455)
Q Consensus 815 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~ 894 (1455)
+ . . . .+. +.
T Consensus 226 ~-------------~-----------------------------~-----~------~~~-------------~~----- 234 (501)
T PRK11288 226 A-------------Q-----------------------------V-----D------RDQ-------------LV----- 234 (501)
T ss_pred c-------------c-----------------------------C-----C------HHH-------------HH-----
Confidence 0 0 0 0 000 00
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 895 FITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTL 974 (1455)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~l 974 (1455)
..+...
T Consensus 235 ------------------------~~~~~~-------------------------------------------------- 240 (501)
T PRK11288 235 ------------------------QAMVGR-------------------------------------------------- 240 (501)
T ss_pred ------------------------HHhcCC--------------------------------------------------
Confidence 000000
Q ss_pred HHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 975 LTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFF 1054 (1455)
Q Consensus 975 l~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~ 1054 (1455)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK11288 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1055 YRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIIS 1134 (1455)
Q Consensus 1055 y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~ 1134 (1455)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK11288 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCC
Q 000511 1135 FIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWP 1214 (1455)
Q Consensus 1135 ~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp 1214 (1455)
. .. +. ...++. + +
T Consensus 241 ------------~--~~---------------------------------------~~---~~~~~~-------~----~ 253 (501)
T PRK11288 241 ------------E--IG---------------------------------------DI---YGYRPR-------P----L 253 (501)
T ss_pred ------------C--cc---------------------------------------cc---cccccc-------C----C
Confidence 0 00 00 000000 0 0
Q ss_pred CCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCC-hHHHh
Q 000511 1215 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLR 1293 (1455)
Q Consensus 1215 ~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~-~~~lR 1293 (1455)
.+..++++|++++ .+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .+..|
T Consensus 254 ~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 327 (501)
T PRK11288 254 GEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIR 327 (501)
T ss_pred CCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHh
Confidence 1125889999742 4899999999999999999999999999999999999999999999999987543 34567
Q ss_pred cccEEEeCCCC---CCC-CcHHHhcCcCCCC--ChHHH--HHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHH
Q 000511 1294 GRFAVVPQSPF---LFE-GSLRDNLDPFHMN--DDLKI--WSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICL 1364 (1455)
Q Consensus 1294 ~~i~~VpQdp~---lf~-gTIreNLdp~~~~--~d~ei--~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~L 1364 (1455)
++++|+||+|. +|+ .|+.+|+...... ..... ...-++....+.++.+|++ ........+||||||||++|
T Consensus 328 ~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrl~l 407 (501)
T PRK11288 328 AGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIMNLSGGNQQKAIL 407 (501)
T ss_pred CCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCccccCCHHHHHHHHH
Confidence 89999999973 554 6999998653110 00000 0000111223445555763 34455566899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1365 ARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
|||++.+|++|||||||++||..+.+.+.+.|++.. .+.|||+|||+++.+.. ||||++|++|++++.|++++..
T Consensus 408 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 408 GRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred HHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 999999999999999999999999999999997764 47899999999999865 8999999999999999988765
No 74
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.2e-61 Score=566.77 Aligned_cols=523 Identities=22% Similarity=0.273 Sum_probs=415.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000511 281 GLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLY 360 (1455)
Q Consensus 281 ~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~ 360 (1455)
.++..+..+....|-.++-..++.+-..+.....+.++++++++.++++++.....+..++.+.++|..|...+++|..+
T Consensus 6 ~ll~~l~~i~~i~qa~llA~~l~~l~~~~~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~ 85 (559)
T COG4988 6 ALLAVLSGIAIIAQAALLADILTKLIEGQLFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAK 85 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555555666666667666666554433344455667778888899999999999999999999999999999999999
Q ss_pred CCccccCCCChhHHHHHHHhhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 361 VRLAERSEFSDGEIQTFMSVDTDRTVNLAN----SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIAN 436 (1455)
Q Consensus 361 l~~~~~~~~~~g~i~nlms~D~~~i~~~~~----~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~ 436 (1455)
++....+..++|+..+++..-++.+..... .....-..|+-+.++++++.+.-|+..++.+..+.+++ ..+++
T Consensus 86 ~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfM---ilvg~ 162 (559)
T COG4988 86 LGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFM---ILVGL 162 (559)
T ss_pred CChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 998888888999999999999998877443 23344456777777788887776665555444443333 44556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 437 LIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLM----KTRSSEVKHLSTRKYLDAWCVFFWATTPTLFS 512 (1455)
Q Consensus 437 ~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~----~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (1455)
..++..+++++....-.+..-+-|+|+.++|.|+..+...++|. +.|+.-|+.++-.-.-.+..-++.... +...
T Consensus 163 ~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~ls-iAlv 241 (559)
T COG4988 163 AAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLS-IALV 241 (559)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 66677778888888888888999999999999998766665554 456555655543322222233332222 2222
Q ss_pred HHHHHHHHHhC-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCC
Q 000511 513 LFTFGLFALMG-HQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNG 591 (1455)
Q Consensus 513 ~~~f~~~~~~~-~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~ 591 (1455)
.+.+ .+.+.+ |+++....+.++.+.--+-.|+..+...+..-.++.++.+++..|++.|............
T Consensus 242 Av~~-g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~------- 313 (559)
T COG4988 242 AVYI-GFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEV------- 313 (559)
T ss_pred HHHH-HHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcccccc-------
Confidence 2333 334455 6899999999999999999999999999999999999999999999877543311100000
Q ss_pred CccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC---
Q 000511 592 LSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--- 668 (1455)
Q Consensus 592 ~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--- 668 (1455)
.+.+...+..+|.+|.|+..+ ++++|+||++++|++++|||+||||||||+++|+|+++|++|+|.++|
T Consensus 314 ---~~~~~~ei~~~~l~~~y~~g~-----~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l 385 (559)
T COG4988 314 ---ANEPPIEISLENLSFRYPDGK-----PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDL 385 (559)
T ss_pred ---ccCCCceeeecceEEecCCCC-----cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccc
Confidence 012234455669999997531 359999999999999999999999999999999999999999999986
Q ss_pred ----------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 ----------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
+++||+|+|.||++||||||+++++ .+++...++++..+|.+.++. |+|.+|++||+|.+|||||+||
T Consensus 386 ~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QR 464 (559)
T COG4988 386 RDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQR 464 (559)
T ss_pred cccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHH
Confidence 5999999999999999999999987 668899999999999999998 9999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 817 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 817 (1455)
|+||||++++++++|+|||||+||.++++.|.+. +.. +.+++|+|+||||++.+..||+|++|++|+++++|+|+++.
T Consensus 465 laLARAll~~~~l~llDEpTA~LD~etE~~i~~~-l~~-l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~ 542 (559)
T COG4988 465 LALARALLSPASLLLLDEPTAHLDAETEQIILQA-LQE-LAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELS 542 (559)
T ss_pred HHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHH-HHH-HHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHh
Confidence 9999999999999999999999999999988887 444 67789999999999999999999999999999999999998
Q ss_pred hccccCccc
Q 000511 818 VSLYSGFWS 826 (1455)
Q Consensus 818 ~~~~~~~~~ 826 (1455)
.+.+.+..+
T Consensus 543 ~~~~~y~~l 551 (559)
T COG4988 543 EKQGLYANL 551 (559)
T ss_pred hcCcHHHHH
Confidence 776665543
No 75
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2e-60 Score=604.06 Aligned_cols=532 Identities=18% Similarity=0.218 Sum_probs=412.6
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 269 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRS 348 (1455)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~ 348 (1455)
.++.+++.++..+++.++..++..+.|++++.++|.+...... ..+++.+++..++..+......+...++..+++.
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSDV---LPTLALWAGFGVFNTIAYVLVAREADRLAHGRRA 89 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888888899999999999999999999977543221 1111122223333444444445566778888899
Q ss_pred HHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH-H--HHHHhHHHHHHHHHHH
Q 000511 349 SIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY-L--LYTQVKFAFVSGLAIT 424 (1455)
Q Consensus 349 ~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~-l--L~~~lg~a~l~g~~v~ 424 (1455)
.+...+|+|.++++...+.+.++|++++.++.|++.+..... .+..+...++.++++++ + +.+.+++.++ +++
T Consensus 90 ~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l---~~~ 166 (585)
T TIGR01192 90 TLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLM---VLG 166 (585)
T ss_pred HHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 999999999999999998888999999999999999976543 33333444444433222 2 2223333322 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 425 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 504 (1455)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 504 (1455)
++...+..++.+++.+..++..+..++..+.+.|.++|+++||.++.|+.+.+++++..++-.+...+..........+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (585)
T TIGR01192 167 ILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLN 246 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344556677777888888888889999999999999999999999998887777655433333333222222222221
Q ss_pred HHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhc
Q 000511 505 ATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 582 (1455)
Q Consensus 505 ~~~~--~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 582 (1455)
.... ..+.++.+|.|.+.++.++++.+++++.++..+..|+..+...+..+.++..+.+|+.++++.++..+....
T Consensus 247 ~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-- 324 (585)
T TIGR01192 247 RMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-- 324 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc--
Confidence 1111 223456678888888899999999999999999999999999999999999999999999975432111000
Q ss_pred CCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCc
Q 000511 583 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 662 (1455)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G 662 (1455)
.+. .+.....++++|++|+|+.+ . ++|+|+||++++|+.++|+||||||||||+++|+|+++|++|
T Consensus 325 -~~~--------~~~~~~~i~~~~v~~~y~~~--~---~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G 390 (585)
T TIGR01192 325 -APE--------LPNVKGAVEFRHITFEFANS--S---QGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVG 390 (585)
T ss_pred -CCC--------CCCCCCeEEEEEEEEECCCC--C---ccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCC
Confidence 000 01123469999999999642 2 359999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000511 663 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1455)
Q Consensus 663 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~ 728 (1455)
+|.++| .++||+|+|++|++|++|||.++.+ .++++..++++.+++++.+..+|+|++|.+|++|.
T Consensus 391 ~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~ 470 (585)
T TIGR01192 391 QILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGN 470 (585)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCC
Confidence 999876 5899999999999999999999854 57778888999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEE
Q 000511 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1455)
Q Consensus 729 ~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1455)
+||||||||++||||++++|+++|||||||+||+++++.+.+. +.. ..+++|+|+|||+++.++.||+|++|++|+++
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~-l~~-~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~ 548 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNA-IDA-LRKNRTTFIIAHRLSTVRNADLVLFLDQGRLI 548 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHH-HHH-HhCCCEEEEEEcChHHHHcCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999998876 433 45689999999999999999999999999999
Q ss_pred EecCHHHHHhccccCc
Q 000511 809 WIGSSADLAVSLYSGF 824 (1455)
Q Consensus 809 ~~g~~~~l~~~~~~~~ 824 (1455)
+.|+++++.++.+.+.
T Consensus 549 ~~g~~~~l~~~~~~y~ 564 (585)
T TIGR01192 549 EKGSFQELIQKDGRFY 564 (585)
T ss_pred EECCHHHHHHCCChHH
Confidence 9999999987655443
No 76
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-63 Score=615.95 Aligned_cols=435 Identities=22% Similarity=0.314 Sum_probs=327.9
Q ss_pred EcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--------------cE
Q 000511 605 QDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------------SI 670 (1455)
Q Consensus 605 ~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------------~i 670 (1455)
+|+++.|+. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 2 ~nl~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 75 (491)
T PRK10982 2 SNISKSFPG------VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGI 75 (491)
T ss_pred CceEEEeCC------EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 467777742 2359999999999999999999999999999999999999999999875 38
Q ss_pred EEEcCCCCCCC-cCHHHHhccCCC------CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000511 671 AYVPQVPWILS-GTIRDNILFGKN------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1455)
Q Consensus 671 ~y~~Q~p~l~~-~ti~~nI~~g~~------~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 739 (1455)
+|++|++.++. .|++||+.++.. .+.+ +..++++.+++. ........+|||||||||+
T Consensus 76 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGq~qrv~ 144 (491)
T PRK10982 76 SMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDID-----------IDPRAKVATLSVSQMQMIE 144 (491)
T ss_pred EEEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCC-----------CCccCchhhCCHHHHHHHH
Confidence 99999998765 599999987631 1222 222333333332 1234456789999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHHHh
Q 000511 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 740 lARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
||||+..+|+++||||||++||+.+.+++.+. +......++|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 145 lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 223 (491)
T PRK10982 145 IAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTI-IRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTM 223 (491)
T ss_pred HHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCH
Confidence 99999999999999999999999999988776 33312357899999999998864 99999999999987665322100
Q ss_pred ccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHHHhhhhhHHHHH
Q 000511 819 SLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITL 898 (1455)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~ 898 (1455)
.+. .
T Consensus 224 -----------------------------------------------------~~~-------~---------------- 227 (491)
T PRK10982 224 -----------------------------------------------------DKI-------I---------------- 227 (491)
T ss_pred -----------------------------------------------------HHH-------H----------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 899 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 978 (1455)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 978 (1455)
..+..
T Consensus 228 --------------------~~~~~------------------------------------------------------- 232 (491)
T PRK10982 228 --------------------AMMVG------------------------------------------------------- 232 (491)
T ss_pred --------------------HHHhC-------------------------------------------------------
Confidence 00000
Q ss_pred hcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 979 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1058 (1455)
Q Consensus 979 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~ 1058 (1455)
T Consensus 233 -------------------------------------------------------------------------------- 232 (491)
T PRK10982 233 -------------------------------------------------------------------------------- 232 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1059 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIAT 1138 (1455)
Q Consensus 1059 sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1138 (1455)
+
T Consensus 233 -----------~-------------------------------------------------------------------- 233 (491)
T PRK10982 233 -----------R-------------------------------------------------------------------- 233 (491)
T ss_pred -----------C--------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCcc
Q 000511 1139 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGL 1218 (1455)
Q Consensus 1139 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~ 1218 (1455)
. .. + ..+++. .+ +.+..
T Consensus 234 --------~--~~---------------------------------------~-----~~~~~~-----~~----~~~~~ 250 (491)
T PRK10982 234 --------S--LT---------------------------------------Q-----RFPDKE-----NK----PGEVI 250 (491)
T ss_pred --------C--cc---------------------------------------c-----cccccc-----CC----CCCcE
Confidence 0 00 0 000000 00 11225
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH-HHhcccE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR-DLRGRFA 1297 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~-~lR~~i~ 1297 (1455)
|+++|++++| +++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|+.++
T Consensus 251 i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 326 (491)
T PRK10982 251 LEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFA 326 (491)
T ss_pred EEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCE
Confidence 8999999875 2599999999999999999999999999999999999999999999999999876654 4577899
Q ss_pred EEeCCCC---CCC-CcHHHhc-----CcCCC----CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHH
Q 000511 1298 VVPQSPF---LFE-GSLRDNL-----DPFHM----NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLIC 1363 (1455)
Q Consensus 1298 ~VpQdp~---lf~-gTIreNL-----dp~~~----~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~ 1363 (1455)
|+||++. +|+ .|+++|. ..... .+..+.. ....+.++.+|+. .........||||||||++
T Consensus 327 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~ 401 (491)
T PRK10982 327 LVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMK-----SDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVI 401 (491)
T ss_pred EcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHH-----HHHHHHHHhcCccCCCcccccccCCcHHHHHHH
Confidence 9999963 565 4777763 21111 1111111 1223344555553 2345566789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1364 LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
||||++++|+||||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|+++..++++++.
T Consensus 402 la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 479 (491)
T PRK10982 402 IGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTKTTT 479 (491)
T ss_pred HHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 9999999999999999999999999999999997753 48999999999999875 8999999999999888776543
No 77
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=9e-61 Score=604.26 Aligned_cols=468 Identities=19% Similarity=0.237 Sum_probs=352.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhh
Q 000511 949 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAV 1028 (1455)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~ 1028 (1455)
.++.++..+.....+.+...+++.++++++++.|++||++.++|++++|+++|++.+...+. .+..++..++.+++.++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~ 140 (547)
T PRK10522 62 MAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAA 140 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 44566677788888999999999999999999999999999999999999999999987554 35556667777777777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcH---HHHHHHHHHHHH
Q 000511 1029 VLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSE---DYFMAKFKEHVV 1105 (1455)
Q Consensus 1029 ~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e---~~~~~~~~~~~~ 1105 (1455)
++.+.+|.++++++..+.+...+..+..+..+...+...+..+.+.+++.|.++|+++++ ++.+ +.+.+++.+..+
T Consensus 141 ~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~ 219 (547)
T PRK10522 141 YLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQ 219 (547)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHH
Confidence 777888877766555444444444444443343333445567788899999999999995 5443 456777777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1106 LYQRTSYSELTASLWLSLRLQLLAAFI-ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEK 1184 (1455)
Q Consensus 1106 ~~~~~~~~~~~~~~wl~~~l~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~ 1184 (1455)
...+..+....... ....+..++ ...+++..++.. .. ...+.+.++....+...+..++..+...+.++..
T Consensus 220 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~ 291 (547)
T PRK10522 220 EYRHHIIRADTFHL----SAVNWSNIMMLGAIGLVFYMAN--SL--GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLS 291 (547)
T ss_pred HHHhhhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH--Hh--hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66554443222111 111111111 111111111111 00 1112233333333444566788899999999999
Q ss_pred HHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHH
Q 000511 1185 EMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILN 1264 (1455)
Q Consensus 1185 ~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~ 1264 (1455)
...+.+|+.++.+.++|+......+ -|..+.|+|+||+|+|++ .+++|+|+||+|+|||++||+|+||||||||++
T Consensus 292 ~~~a~~ri~~l~~~~~~~~~~~~~~---~~~~~~i~~~~v~f~y~~-~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ 367 (547)
T PRK10522 292 AQVAFNKLNKLALAPYKAEFPRPQA---FPDWQTLELRNVTFAYQD-NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAM 367 (547)
T ss_pred HHHHHHHHHHHhccccccccccccc---cCcCceEEEEEEEEEeCC-CCeEEecceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 9999999999976554321111111 122357999999999974 357999999999999999999999999999999
Q ss_pred HHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCc
Q 000511 1265 ALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLE 1344 (1455)
Q Consensus 1265 ~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLd 1344 (1455)
+|+|+++|++|+|.+||+|+++++.+++|+++++|||||.+|+||+++| +...+|++++++++++++.+.++
T Consensus 368 ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~----- 439 (547)
T PRK10522 368 LLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLE----- 439 (547)
T ss_pred HHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhh-----
Confidence 9999999999999999999999999999999999999999999999999 23456778888887776654432
Q ss_pred hhhhc---CCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhhC
Q 000511 1345 TFVKE---SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMD 1419 (1455)
Q Consensus 1345 t~v~e---~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~~D 1419 (1455)
.++ +|.+||||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||++++..||
T Consensus 440 --~~~~~~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d 517 (547)
T PRK10522 440 --LEDGRISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHAD 517 (547)
T ss_pred --ccccCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCC
Confidence 222 378999999999999999999999999999999999999999999987654 4899999999999999999
Q ss_pred EEEEEeCCeEEEe-CChhHHhc
Q 000511 1420 EILILDHGHLVEQ-GNPQTLLQ 1440 (1455)
Q Consensus 1420 rI~vl~~G~ive~-G~p~eLl~ 1440 (1455)
+|++|++|+++|. |++.+-..
T Consensus 518 ~i~~l~~G~i~e~~~~~~~~~~ 539 (547)
T PRK10522 518 RLLEMRNGQLSELTGEERDAAS 539 (547)
T ss_pred EEEEEECCEEEEecCCchhhhh
Confidence 9999999999988 55544443
No 78
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4e-61 Score=606.89 Aligned_cols=203 Identities=23% Similarity=0.285 Sum_probs=167.7
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcc
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1295 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~ 1295 (1455)
+..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ + .+
T Consensus 322 ~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~ 388 (556)
T PRK11819 322 DKVIEAENLSKSFGD--RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VK 388 (556)
T ss_pred CeEEEEEeEEEEECC--eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eE
Confidence 346999999999964 3699999999999999999999999999999999999999999999964 2 16
Q ss_pred cEEEeCCC-CCCCC-cHHHhcCcCCCC----C-hHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHH
Q 000511 1296 FAVVPQSP-FLFEG-SLRDNLDPFHMN----D-DLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1296 i~~VpQdp-~lf~g-TIreNLdp~~~~----~-d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARA 1367 (1455)
++|+||++ .+++. |+++|+...... . +.+.. +.++.+|+.. ........||||||||++||||
T Consensus 389 i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~---------~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~a 459 (556)
T PRK11819 389 LAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSR---------AYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKT 459 (556)
T ss_pred EEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHH---------HHHHhCCCChhHhcCchhhCCHHHHHHHHHHHH
Confidence 99999997 56654 999999653211 1 11222 2344456643 3455566899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeC-CeEEE-eCChhHHhccC
Q 000511 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-GHLVE-QGNPQTLLQDE 1442 (1455)
Q Consensus 1368 lLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~-G~ive-~G~p~eLl~~~ 1442 (1455)
++.+|++|||||||++||+.+.+.+.+.|++. + .|||+|||+++.+.. ||+|++|++ |++.+ .|++++++++.
T Consensus 460 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~~ 535 (556)
T PRK11819 460 LKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEEDK 535 (556)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999875 4 499999999998876 899999986 88874 68898887653
No 79
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.6e-62 Score=611.23 Aligned_cols=442 Identities=19% Similarity=0.244 Sum_probs=330.5
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|+++.|.. . .+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 4 l~~~~l~~~~~~---~---~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~ 77 (490)
T PRK10938 4 LQISQGTFRLSD---T---KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQK 77 (490)
T ss_pred EEEEeEEEEcCC---e---eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHH
Confidence 789999999853 1 259999999999999999999999999999999999999999998754
Q ss_pred cEEEEcCCCCC---------CCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000511 669 SIAYVPQVPWI---------LSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1455)
Q Consensus 669 ~i~y~~Q~p~l---------~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 739 (1455)
.++|++|+|.+ +..|++||+.++.. ++++..++++..+++... .....+|||||||||+
T Consensus 78 ~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~ 145 (490)
T PRK10938 78 LVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITALL-----------DRRFKYLSTGETRKTL 145 (490)
T ss_pred HhceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhhh-----------hCCcccCCHHHHHHHH
Confidence 27999998753 14599999876532 345566777777665322 3345689999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHHHh
Q 000511 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 740 lARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
||||+..+|+++||||||++||+...+++.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 146 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 224 (490)
T PRK10938 146 LCQALMSEPDLLILDEPFDGLDVASRQQLAEL-LASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQ 224 (490)
T ss_pred HHHHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999988876 33312347899999999998865 99999999999998776554321
Q ss_pred ccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHHHhhhhhHHHHH
Q 000511 819 SLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITL 898 (1455)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~ 898 (1455)
... . .+..+.
T Consensus 225 ~~~--------------------------------------------~-------~~~~~~------------------- 234 (490)
T PRK10938 225 QAL--------------------------------------------V-------AQLAHS------------------- 234 (490)
T ss_pred chh--------------------------------------------h-------hhhhhh-------------------
Confidence 000 0 000000
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 899 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 978 (1455)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 978 (1455)
..+ ..
T Consensus 235 --------------------~~~-~~------------------------------------------------------ 239 (490)
T PRK10938 235 --------------------EQL-EG------------------------------------------------------ 239 (490)
T ss_pred --------------------hcc-Cc------------------------------------------------------
Confidence 000 00
Q ss_pred hcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 979 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1058 (1455)
Q Consensus 979 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~ 1058 (1455)
.
T Consensus 240 --------------------------~----------------------------------------------------- 240 (490)
T PRK10938 240 --------------------------V----------------------------------------------------- 240 (490)
T ss_pred --------------------------c-----------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1059 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIAT 1138 (1455)
Q Consensus 1059 sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1138 (1455)
T Consensus 241 -------------------------------------------------------------------------------- 240 (490)
T PRK10938 241 -------------------------------------------------------------------------------- 240 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCcc
Q 000511 1139 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGL 1218 (1455)
Q Consensus 1139 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~ 1218 (1455)
.... ..+... ....+ +....
T Consensus 241 --------~~~~------------------------------------------------~~~~~~-~~~~~---~~~~~ 260 (490)
T PRK10938 241 --------QLPE------------------------------------------------PDEPSA-RHALP---ANEPR 260 (490)
T ss_pred --------ccCc------------------------------------------------cccccc-ccccC---CCCce
Confidence 0000 000000 00000 01225
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-CCceEEECCEeCCC-CChHHHhccc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-CGGQILVDGLNIIN-TPVRDLRGRF 1296 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-~~G~I~IdG~di~~-i~~~~lR~~i 1296 (1455)
|+++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+.++ ++|+|.+||.++.. .+....|+++
T Consensus 261 l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 338 (490)
T PRK10938 261 IVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHI 338 (490)
T ss_pred EEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhc
Confidence 999999999964 3599999999999999999999999999999999998876 69999999987632 2334568899
Q ss_pred EEEeCCCCCCC---CcHHHhcCcC--C---CC--ChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000511 1297 AVVPQSPFLFE---GSLRDNLDPF--H---MN--DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1365 (1455)
Q Consensus 1297 ~~VpQdp~lf~---gTIreNLdp~--~---~~--~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LA 1365 (1455)
+|+||++.++. .|+++++.+. . .. .+.+. +....+.++.+|++. ........||||||||++||
T Consensus 339 ~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la 413 (490)
T PRK10938 339 GYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQ-----QKLAQQWLDILGIDKRTADAPFHSLSWGQQRLALIV 413 (490)
T ss_pred eEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHH-----HHHHHHHHHHcCCchhhccCchhhCCHHHHHHHHHH
Confidence 99999986542 4677776421 1 01 01110 111233444456665 45555668999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC-C-cEEEEeccChhhHhh--hCEEEEEeCCeEEEeC
Q 000511 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK-G-MTVITIAHRISTVLN--MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1366 RAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~-~-~TvI~IaHrl~ti~~--~DrI~vl~~G~ive~G 1433 (1455)
||++++|++|||||||++||+++.+.+.+.|++..+ + .|||+|||+++.+.. ||+|++|++|++++.-
T Consensus 414 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 414 RALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEee
Confidence 999999999999999999999999999999988643 3 479999999999975 7999999999998764
No 80
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=8.3e-61 Score=604.12 Aligned_cols=480 Identities=22% Similarity=0.282 Sum_probs=332.6
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--cEEEEcCCCC
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPW 678 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~p~ 678 (1455)
.++++|++++|+.+ +++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.+++ .||||+|+|+
T Consensus 4 ~i~~~nls~~~~~~-----~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~ 78 (552)
T TIGR03719 4 IYTMNRVSKVVPPK-----KEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQ 78 (552)
T ss_pred EEEEeeEEEecCCC-----CeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCC
Confidence 47899999998521 2359999999999999999999999999999999999999999999874 6999999999
Q ss_pred CCC-cCHHHHhccCCC-------------------CC--------HHHHHHHHHHhcchH---HHhhcc--CCCcccccC
Q 000511 679 ILS-GTIRDNILFGKN-------------------YD--------PQSYSETLKACTLDV---DISLMV--GGDMAYIGE 725 (1455)
Q Consensus 679 l~~-~ti~~nI~~g~~-------------------~~--------~~~~~~v~~~~~l~~---di~~l~--~gd~t~ig~ 725 (1455)
++. .|++|||.++.. .+ .+++.++++.++... .+..+- -|.. ....
T Consensus 79 ~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~ 157 (552)
T TIGR03719 79 LDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCP-PWDA 157 (552)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCC-cccC
Confidence 875 599999987521 01 012334444554321 111110 0111 1245
Q ss_pred CCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeC
Q 000511 726 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDK 804 (1455)
Q Consensus 726 ~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~ 804 (1455)
...+|||||||||+||||++.+|+++||||||++||+.+.+++.+. +.. . +.|+|+|||+++++.. ||+|++|++
T Consensus 158 ~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~-L~~-~--~~tvIiisHd~~~~~~~~d~v~~l~~ 233 (552)
T TIGR03719 158 DVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQH-LQE-Y--PGTVVAVTHDRYFLDNVAGWILELDR 233 (552)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHH-HHh-C--CCeEEEEeCCHHHHHhhcCeEEEEEC
Confidence 6779999999999999999999999999999999999999988876 332 2 3699999999999876 999999999
Q ss_pred CeEE-EecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhH
Q 000511 805 GQVK-WIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELT 883 (1455)
Q Consensus 805 G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~ 883 (1455)
|+++ ..|+++++..... . . .+ ....+.+..+.
T Consensus 234 g~i~~~~g~~~~~~~~~~-------------~----~---------~~---------------~~~~~~~~~~~------ 266 (552)
T TIGR03719 234 GRGIPWEGNYSSWLEQKE-------------K----R---------LE---------------QEEKEESARQK------ 266 (552)
T ss_pred CEEEEecCCHHHHHHHHH-------------H----H---------HH---------------HHHHHHHHHHH------
Confidence 9975 6788877642100 0 0 00 00000000000
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 884 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 963 (1455)
Q Consensus 884 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 963 (1455)
.+.. ...|...
T Consensus 267 ----~~~~--------------------------~~~~~~~--------------------------------------- 277 (552)
T TIGR03719 267 ----ALKR--------------------------ELEWVRS--------------------------------------- 277 (552)
T ss_pred ----HHHH--------------------------HHHHHHh---------------------------------------
Confidence 0000 0000000
Q ss_pred HHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 000511 964 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1043 (1455)
Q Consensus 964 ~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p 1043 (1455)
.+
T Consensus 278 -----------------~~------------------------------------------------------------- 279 (552)
T TIGR03719 278 -----------------SP------------------------------------------------------------- 279 (552)
T ss_pred -----------------hh-------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1044 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1123 (1455)
Q Consensus 1044 ~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 1123 (1455)
.. ++. + . +
T Consensus 280 -------------~~-~~~-------~-----------------------------~--------~-------------- 287 (552)
T TIGR03719 280 -------------KA-RQA-------K-----------------------------S--------K-------------- 287 (552)
T ss_pred -------------hh-HHH-------H-----------------------------H--------H--------------
Confidence 00 000 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCccc
Q 000511 1124 RLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY-MDVPQEE 1202 (1455)
Q Consensus 1124 ~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~-~~~~~e~ 1202 (1455)
......++..+. ...+++.
T Consensus 288 ------------------------------------------------------------~~~~~~~~~~~~~~~~~~~~ 307 (552)
T TIGR03719 288 ------------------------------------------------------------ARLARYEELLSQEFQKRNET 307 (552)
T ss_pred ------------------------------------------------------------HHHHHHHhhhhhcccccCCC
Confidence 000000000000 0000000
Q ss_pred cccCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCE
Q 000511 1203 LCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL 1282 (1455)
Q Consensus 1203 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~ 1282 (1455)
.. ...+...-+.+..++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++
T Consensus 308 ~~-~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~- 383 (552)
T TIGR03719 308 AE-IYIPPGPRLGDKVIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE- 383 (552)
T ss_pred ce-eecCCCCCCCCeEEEEeeEEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-
Confidence 00 0000000011236999999999964 3699999999999999999999999999999999999999999999964
Q ss_pred eCCCCChHHHhcccEEEeCCCC-CCC-CcHHHhcCcCCC---CC--hHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCC
Q 000511 1283 NIINTPVRDLRGRFAVVPQSPF-LFE-GSLRDNLDPFHM---ND--DLKIWSVLEKCHVKEEVEAVGLET-FVKESGISF 1354 (1455)
Q Consensus 1283 di~~i~~~~lR~~i~~VpQdp~-lf~-gTIreNLdp~~~---~~--d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~L 1354 (1455)
+ .+++|+||++. +++ -|+++|+..... .. +.+. .+.++.+|++. ........|
T Consensus 384 ~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~---------~~~l~~~~l~~~~~~~~~~~L 444 (552)
T TIGR03719 384 T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPS---------RAYVGRFNFKGSDQQKKVGQL 444 (552)
T ss_pred c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHH---------HHHHHhCCCChhHhcCchhhC
Confidence 2 16999999973 665 499999965321 11 1111 23344456653 345556689
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeC-CeEEE-
Q 000511 1355 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-GHLVE- 1431 (1455)
Q Consensus 1355 SgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~-G~ive- 1431 (1455)
|||||||++||||++.+|++|||||||++||..+.+.+.+.|++. . .|||+|||+++.+.. ||+|++|++ |++++
T Consensus 445 SgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~ 522 (552)
T TIGR03719 445 SGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHILAFEGDSHVEWF 522 (552)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEEEEEECCCeEEEe
Confidence 999999999999999999999999999999999999999999876 3 499999999999876 899999987 68874
Q ss_pred eCChhHHhcc
Q 000511 1432 QGNPQTLLQD 1441 (1455)
Q Consensus 1432 ~G~p~eLl~~ 1441 (1455)
.|+++++.+.
T Consensus 523 ~g~~~~~~~~ 532 (552)
T TIGR03719 523 EGNYSEYEED 532 (552)
T ss_pred CCCHHHHHHH
Confidence 4888777643
No 81
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=9.3e-61 Score=531.66 Aligned_cols=459 Identities=25% Similarity=0.363 Sum_probs=346.2
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEcC------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------ 668 (1455)
..+.++|.+.++.... ....++++|||++++||.+++||.||||||-..++++|.++. -+|+|..+|
T Consensus 5 ~lL~v~nLsV~f~~~~--~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~ 82 (534)
T COG4172 5 PLLSIRNLSVAFHQEG--GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAA 82 (534)
T ss_pred cceeeeccEEEEecCC--cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcC
Confidence 3467788887776542 234579999999999999999999999999999999999865 367888766
Q ss_pred -----------cEEEEcCCCCC-CCc--CHHHHh----ccCCCCC----HHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000511 669 -----------SIAYVPQVPWI-LSG--TIRDNI----LFGKNYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEK 726 (1455)
Q Consensus 669 -----------~i~y~~Q~p~l-~~~--ti~~nI----~~g~~~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~ 726 (1455)
+|+.++|+|-- .|. ||..-| ...+..+ +++..+.++..++.+- ...+...
T Consensus 83 se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~y 154 (534)
T COG4172 83 SERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAY 154 (534)
T ss_pred CHHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhC
Confidence 69999999952 232 555444 3433333 2344455555555321 1234456
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcC-cccCCceEEEEccCcccccc-CCEEEEEeC
Q 000511 727 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMG-PHMLQKTRILCTHNVQAISA-ADMVVVMDK 804 (1455)
Q Consensus 727 g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~-~~~~~~t~ilvth~~~~l~~-ad~i~~l~~ 804 (1455)
...|||||||||-||.||..+|++||-||||.|||..+..+|++- +.. ....|..++++||++..+.. ||+|+||.+
T Consensus 155 PHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~L-l~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~ 233 (534)
T COG4172 155 PHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDL-LKELQAELGMAILFITHDLGIVRKFADRVYVMQH 233 (534)
T ss_pred CcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHH-HHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEec
Confidence 679999999999999999999999999999999999999999986 332 13347899999999999986 999999999
Q ss_pred CeEEEecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHH
Q 000511 805 GQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTV 884 (1455)
Q Consensus 805 G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~ 884 (1455)
|+++|+|+.+++...... .
T Consensus 234 G~ivE~~~t~~lF~~PqH-------------------------------------------------------------p 252 (534)
T COG4172 234 GEIVETGTTETLFAAPQH-------------------------------------------------------------P 252 (534)
T ss_pred cEEeecCcHHHHhhCCCC-------------------------------------------------------------h
Confidence 999998876554321000 0
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 885 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSL 964 (1455)
Q Consensus 885 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 964 (1455)
| .
T Consensus 253 Y---T--------------------------------------------------------------------------- 254 (534)
T COG4172 253 Y---T--------------------------------------------------------------------------- 254 (534)
T ss_pred H---H---------------------------------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 000511 965 RAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPF 1044 (1455)
Q Consensus 965 ~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~ 1044 (1455)
T Consensus 255 -------------------------------------------------------------------------------- 254 (534)
T COG4172 255 -------------------------------------------------------------------------------- 254 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1045 WFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLR 1124 (1455)
Q Consensus 1045 ~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~ 1124 (1455)
+ ++
T Consensus 255 ------------r---~L-------------------------------------------------------------- 257 (534)
T COG4172 255 ------------R---KL-------------------------------------------------------------- 257 (534)
T ss_pred ------------H---HH--------------------------------------------------------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccc
Q 000511 1125 LQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC 1204 (1455)
Q Consensus 1125 l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~ 1204 (1455)
++ .|+..
T Consensus 258 -----------------------------------------------------------------------l~--aeP~g 264 (534)
T COG4172 258 -----------------------------------------------------------------------LA--AEPSG 264 (534)
T ss_pred -----------------------------------------------------------------------Hh--cCCCC
Confidence 00 00000
Q ss_pred cCCCCCCCCCCCccEEEEEEEEEecCC---------CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCc
Q 000511 1205 GYQSLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1275 (1455)
Q Consensus 1205 ~~~~~~~~wp~~g~I~f~nvs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G 1275 (1455)
..++..-...-.++.+||...|+-. .-.+.++|||+.++||.+||||+||||||||-.+|+|+++++ |
T Consensus 265 --~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G 341 (534)
T COG4172 265 --DPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-G 341 (534)
T ss_pred --CCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-c
Confidence 0011111122357777888777422 124799999999999999999999999999999999999976 9
Q ss_pred eEEECCEeCCCCChHH---HhcccEEEeCCCC--CCC-CcHHHhcC----cCC-CCC----hHHHHHHHHHhcHHHHHHh
Q 000511 1276 QILVDGLNIINTPVRD---LRGRFAVVPQSPF--LFE-GSLRDNLD----PFH-MND----DLKIWSVLEKCHVKEEVEA 1340 (1455)
Q Consensus 1276 ~I~IdG~di~~i~~~~---lR~~i~~VpQdp~--lf~-gTIreNLd----p~~-~~~----d~ei~~aL~~~~l~~~i~~ 1340 (1455)
+|.++|.||...+.++ +|+++-+|.|||+ |=+ .||-+-+. -.. ..+ |+.+.+||+.+||+...
T Consensus 342 ~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~-- 419 (534)
T COG4172 342 EIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPAT-- 419 (534)
T ss_pred eEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhH--
Confidence 9999999999888765 5789999999997 221 25554442 112 112 44566667666554322
Q ss_pred CCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-
Q 000511 1341 VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN- 1417 (1455)
Q Consensus 1341 lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~- 1417 (1455)
...-...|||||||||+||||++-+|++++||||||+||.--...|.+.+++.- .+-+-++|+|+|..++.
T Consensus 420 ------r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl 493 (534)
T COG4172 420 ------RNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRAL 493 (534)
T ss_pred ------hhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHh
Confidence 234455799999999999999999999999999999999999999999998753 47799999999999986
Q ss_pred hCEEEEEeCCeEEEeCChhHHhccCCcHHHHH
Q 000511 1418 MDEILILDHGHLVEQGNPQTLLQDECSVFSSF 1449 (1455)
Q Consensus 1418 ~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l 1449 (1455)
||+|+||.+|+|||+|+-++++++|...|.+-
T Consensus 494 ~~~viVm~~GkiVE~G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 494 CHRVIVMRDGKIVEQGPTEAVFANPQHEYTRA 525 (534)
T ss_pred hceEEEEeCCEEeeeCCHHHHhcCCCcHHHHH
Confidence 89999999999999999999999998877653
No 82
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1e-58 Score=637.91 Aligned_cols=545 Identities=19% Similarity=0.182 Sum_probs=399.4
Q ss_pred chHHHHHHHHhHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 264 SLVRAICCAYGYPYIC-LGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSK 341 (1455)
Q Consensus 264 ~l~~~l~~~~~~~~~~-~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 341 (1455)
+.++..+++.++.... .+++.++..++....|+.++...+... +.......+. .+.++++.++..++.....+....
T Consensus 953 ~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~-~~iy~~l~i~~~~~~~~~~~~~~~ 1031 (1522)
T TIGR00957 953 SVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLR-LSVYGALGILQGFAVFGYSMAVSI 1031 (1522)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556555443322 233445555667778888876665321 1111111221 122333333444444344455566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000511 342 LKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSG 420 (1455)
Q Consensus 342 ~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g 420 (1455)
.+.+.-..+...+|+|.++.+...++..+.|+++|.++.|++.+..... .+..+...++.++.++.++.....+.+++.
T Consensus 1032 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~ 1111 (1522)
T TIGR00957 1032 GGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVII 1111 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888999999999999999999999999999999999987544 445555666665555444433323332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 421 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 500 (1455)
Q Consensus 421 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 500 (1455)
++++++...+..+..+..+..++.....+....+..+|.++|+++||.||+|+.|.++..+..+...+..........+.
T Consensus 1112 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1191 (1522)
T TIGR00957 1112 PPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWL 1191 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223333334444444455555566666777899999999999999999999998887776555444433322233332
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhh
Q 000511 501 VFFWATTPTLFSLFTFGLFAL-MGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 579 (1455)
Q Consensus 501 ~~~~~~~~~~~~~~~f~~~~~-~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 579 (1455)
.........+ .++..+.+.+ ..+.+++|.+..++.+...+..|+..+...+..+..+.+|.+||.+|++.++..+...
T Consensus 1192 ~~~~~~~~~~-~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~ 1270 (1522)
T TIGR00957 1192 AVRLECVGNC-IVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQI 1270 (1522)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 2221111111 1222233333 3467999999999999999999999999999999999999999999997654321100
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC
Q 000511 580 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 659 (1455)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~ 659 (1455)
. ...++. . -+.++.|+++|++|+|+++. +++|+|+||+|++||.++|||++|||||||+++|+|.++|
T Consensus 1271 ~-~~~~~~------~-wp~~g~I~f~nVsf~Y~~~~----~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~ 1338 (1522)
T TIGR00957 1271 Q-ETAPPS------G-WPPRGRVEFRNYCLRYREDL----DLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES 1338 (1522)
T ss_pred c-CCCCCC------C-CCCCCcEEEEEEEEEeCCCC----cccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC
Confidence 0 000100 0 02346799999999997542 2369999999999999999999999999999999999999
Q ss_pred CCcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000511 660 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 726 (1455)
Q Consensus 660 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~ 726 (1455)
++|+|.++| +|+||||+|.||+|||||||....+++++...++++.|++++.+..+|+|.+|++||+
T Consensus 1339 ~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1339 AEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred CCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 999999987 5999999999999999999983336888899999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCe
Q 000511 727 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1455)
Q Consensus 727 g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1455)
|.+||||||||++||||++++|+|+|||||||+||+++++.|.+. +.. ..+++|+|+|+||++.+..||+|++|++|+
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~-l~~-~~~~~TvI~IAHRl~ti~~~DrIlVld~G~ 1496 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQST-IRT-QFEDCTVLTIAHRLNTIMDYTRVIVLDKGE 1496 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999887766 444 567899999999999999999999999999
Q ss_pred EEEecCHHHHHhccccCc
Q 000511 807 VKWIGSSADLAVSLYSGF 824 (1455)
Q Consensus 807 i~~~g~~~~l~~~~~~~~ 824 (1455)
|+|.|+|+|++++.+.+.
T Consensus 1497 IvE~G~~~eLl~~~~~f~ 1514 (1522)
T TIGR00957 1497 VAEFGAPSNLLQQRGIFY 1514 (1522)
T ss_pred EEEECCHHHHHhCCCHHH
Confidence 999999999987654433
No 83
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.7e-59 Score=537.44 Aligned_cols=512 Identities=23% Similarity=0.284 Sum_probs=407.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc--CCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000511 285 VVNDSIGFAGPLLLNKLIKFLQQ--GSG--HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLY 360 (1455)
Q Consensus 285 l~~~~~~~~~P~ll~~li~~~~~--~~~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~ 360 (1455)
+..-.+...+|++++.+++.+.. ..+ .......+.+++++.++.+++.-........+..++-......+|++.+.
T Consensus 40 ~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ 119 (591)
T KOG0057|consen 40 LGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMS 119 (591)
T ss_pred HhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33356677899999999999864 212 22334556677777888888888888888888888888889999999999
Q ss_pred CCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 000511 361 VRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILL-IPVNKWIANLI 438 (1455)
Q Consensus 361 l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~-~~~~~~~~~~~ 438 (1455)
++.+.+.+..+|++.+.|..-...|..... .+..+....+++.++...+++..|.+..+...+.+.. ......+..+-
T Consensus 120 ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~R 199 (591)
T KOG0057|consen 120 LDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWR 199 (591)
T ss_pred hhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHH
Confidence 999998889999999999888888877654 4566777888999989999999998765544433333 33344555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000511 439 ANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTL-FSLFTFG 517 (1455)
Q Consensus 439 ~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~-~~~~~f~ 517 (1455)
.+.+++++++.++..+..-+.|.|-.+||.|+-|+...++....-..--+...+.....++.++. ...+ ....++.
T Consensus 200 n~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfg---Q~~iFsv~~~~i 276 (591)
T KOG0057|consen 200 NRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFG---QKAIFSVALTFI 276 (591)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHH---HHHHHHHHHHHH
Confidence 77889999999999999999999999999999999988887665322222222222122222222 2111 1223333
Q ss_pred HHH----HhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCc
Q 000511 518 LFA----LMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLS 593 (1455)
Q Consensus 518 ~~~----~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~ 593 (1455)
.|+ +.++.+|.+...-..+++.+|..|+..+...+..+.++..-++-....+..++ + . +....|.
T Consensus 277 m~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~--~-i-~~~~~~i------- 345 (591)
T KOG0057|consen 277 MVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDE--D-I-QEAALPI------- 345 (591)
T ss_pred HHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhh--h-h-hhccCCc-------
Confidence 333 44568999999999999999999999999999988888877765443332111 1 1 1000111
Q ss_pred cCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----
Q 000511 594 NFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----- 668 (1455)
Q Consensus 594 ~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----- 668 (1455)
...+..|+|+|++|+|.++ +++|+++||+||+||.+||+|+|||||||++++|+++++ ++|+|.++|
T Consensus 346 --~~~~~~I~F~dV~f~y~~k-----~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~ 417 (591)
T KOG0057|consen 346 --ELFGGSIEFDDVHFSYGPK-----RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKE 417 (591)
T ss_pred --ccCCCcEEEEeeEEEeCCC-----CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhh
Confidence 1234569999999999742 346999999999999999999999999999999999999 999999998
Q ss_pred --------cEEEEcCCCCCCCcCHHHHhccCCCC-CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000511 669 --------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1455)
Q Consensus 669 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 739 (1455)
.||||||+..|||+||.+||.+|++. .+++..++++..++++-+..+|+|++|.+||+|..|||||||||+
T Consensus 418 ~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvs 497 (591)
T KOG0057|consen 418 VSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVS 497 (591)
T ss_pred hChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHH
Confidence 49999999999999999999999864 567777888888999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHhc
Q 000511 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 819 (1455)
Q Consensus 740 lARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1455)
||||+.+||+|+++|||||+||.+|++.+++. +.+ ...+||+|+|.||++.++.+|+|+++++|++.+.|+++|++..
T Consensus 498 laRa~lKda~Il~~DEaTS~LD~~TE~~i~~~-i~~-~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~ 575 (591)
T KOG0057|consen 498 LARAFLKDAPILLLDEATSALDSETEREILDM-IMD-VMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAP 575 (591)
T ss_pred HHHHHhcCCCeEEecCcccccchhhHHHHHHH-HHH-hcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhh
Confidence 99999999999999999999999999999998 455 6789999999999999999999999999999999999999874
Q ss_pred c
Q 000511 820 L 820 (1455)
Q Consensus 820 ~ 820 (1455)
.
T Consensus 576 s 576 (591)
T KOG0057|consen 576 S 576 (591)
T ss_pred h
Confidence 3
No 84
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-59 Score=598.14 Aligned_cols=200 Identities=22% Similarity=0.339 Sum_probs=164.6
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
..|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++. .++
T Consensus 311 ~~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 311 PLLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred ceEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 36999999999964 46999999999999999999999999999999999999999999999741 269
Q ss_pred EEEeCCC--CCCC-CcHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1297 AVVPQSP--FLFE-GSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1297 ~~VpQdp--~lf~-gTIreNLdp~~-~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
+|+||++ .+.. .|+.+|+.... ...++++.+ .+..+|+.. ........||||||||++||||++++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~ 448 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRD---------YLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQR 448 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHH---------HHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 9999985 3443 37888763211 112223333 344445542 34455568999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEE-EeCChhHHhc
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-EQGNPQTLLQ 1440 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv-e~G~p~eLl~ 1440 (1455)
|++|||||||++||..+...+.+.|++. . .|||+|||+++.+.. ||||++|++|+++ ..|++++..+
T Consensus 449 p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 449 PNLLLLDEPTNHLDLDMRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 9999999999999999999999999876 4 599999999999876 8999999999998 6799988743
No 85
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.6e-58 Score=588.83 Aligned_cols=199 Identities=24% Similarity=0.327 Sum_probs=164.9
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +++
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 5899999999964 36999999999999999999999999999999999999999999999 4332 699
Q ss_pred EEeCCC-CCCCC-cHHHhcCcCCC-C--C--hHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1298 VVPQSP-FLFEG-SLRDNLDPFHM-N--D--DLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1298 ~VpQdp-~lf~g-TIreNLdp~~~-~--~--d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
|++|++ .+++. |+++|+..... . . +.++ .+.+..+|+.. ........||||||||++||||++
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~---------~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~ 456 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHV---------LGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFL 456 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHH---------HHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHh
Confidence 999986 46655 99999965321 1 1 1122 23344445542 344455679999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEe-CCeEEEe-CChhHHhc
Q 000511 1370 KSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD-HGHLVEQ-GNPQTLLQ 1440 (1455)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~-~G~ive~-G~p~eLl~ 1440 (1455)
++|++|||||||++||..+.+.+.+.|++. +.|||+|||+.+.+.. ||+|++|+ +|++.++ |++++.++
T Consensus 457 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 457 KPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 999999999999999999999999999875 5699999999999875 89999998 8999875 78888754
No 86
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.3e-57 Score=615.95 Aligned_cols=211 Identities=20% Similarity=0.299 Sum_probs=172.9
Q ss_pred cEEEEEEEEEecC-----------CCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC--CCceEEECCEeC
Q 000511 1218 LIEFQNVTMRYKP-----------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNI 1284 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~-----------~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~--~~G~I~IdG~di 1284 (1455)
.+.|+||++.++. +...+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6999999998742 123699999999999999999999999999999999999873 689999999886
Q ss_pred CCCChHHHhcccEEEeCCCCCCCC-cHHHhcCcCC------CCChHH----HHHHHHHhcHHHHHHhCCCchhhhcCC-C
Q 000511 1285 INTPVRDLRGRFAVVPQSPFLFEG-SLRDNLDPFH------MNDDLK----IWSVLEKCHVKEEVEAVGLETFVKESG-I 1352 (1455)
Q Consensus 1285 ~~i~~~~lR~~i~~VpQdp~lf~g-TIreNLdp~~------~~~d~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G-~ 1352 (1455)
. ....|+.++||+|++.+++. |++|||.+.. ..++++ +.++++..+|.+. .|+.+|..+ .
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-----~~~~vg~~~~~ 1018 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-----KDAIVGLPGVT 1018 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-----hCCccCCCCCC
Confidence 4 34567889999999988765 9999996421 122222 3445555554432 255565433 4
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-H-hhhCEEEEEeC-Ce
Q 000511 1353 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDH-GH 1428 (1455)
Q Consensus 1353 ~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~t-i-~~~DrI~vl~~-G~ 1428 (1455)
.||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +++|||+++|+++. + ..||++++|++ |+
T Consensus 1019 ~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~ 1098 (1470)
T PLN03140 1019 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1098 (1470)
T ss_pred CcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCE
Confidence 699999999999999999999999999999999999999999998864 48999999999984 3 56999999996 89
Q ss_pred EEEeCChh
Q 000511 1429 LVEQGNPQ 1436 (1455)
Q Consensus 1429 ive~G~p~ 1436 (1455)
++++|++.
T Consensus 1099 ~v~~G~~~ 1106 (1470)
T PLN03140 1099 VIYSGPLG 1106 (1470)
T ss_pred EEEECCcc
Confidence 99999874
No 87
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-56 Score=581.39 Aligned_cols=547 Identities=22% Similarity=0.264 Sum_probs=395.9
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCC-CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 884 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSS-QTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFG 962 (1455)
Q Consensus 884 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 962 (1455)
+.+.-++..+|..++..++..+ ........+..+...++..... .+......|+...++..++..++.--..+.....
T Consensus 191 l~~al~~~f~~~~~~~~~~~~~-~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~ 269 (1381)
T KOG0054|consen 191 LLRALLRTFGRTFLLSGIFLFL-RDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRV 269 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhh
Confidence 3344444444444333323222 2333555666666665543322 1222234455555566666666665556666778
Q ss_pred HHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 000511 963 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1042 (1455)
Q Consensus 963 ~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 1042 (1455)
+.|.-..+-..+++|.++.+-.--..++.|+|+|-++.|.+.+++..++.-..+...+-.+++ +.++.....+-+++.+
T Consensus 270 g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~-l~lLy~~LG~sa~~G~ 348 (1381)
T KOG0054|consen 270 GMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILA-LYLLYGLLGPSALAGV 348 (1381)
T ss_pred hhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhChHHHHHH
Confidence 888888888889999999988887888999999999999999998776654444433322222 2222222122222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1043 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1122 (1455)
Q Consensus 1043 p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~ 1122 (1455)
.+++++.-++.+..+..+..+......+.......+|.++|+++||.|+||+.|.++..+.-+.-.+........+....
T Consensus 349 ~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~ 428 (1381)
T KOG0054|consen 349 AVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNS 428 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333333444444444444444444455555678999999999999999999999987655543333222222222211
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccc
Q 000511 1123 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1202 (1455)
Q Consensus 1123 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~ 1202 (1455)
... .....++.++.+..... ...+..++..+..++++.-.+..++..+......+-++.+|++|+.+|+..++.+
T Consensus 429 ~~~-~~~p~lv~~~tF~~~v~----~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~ 503 (1381)
T KOG0054|consen 429 FLN-FFSPVLVSVVTFVVFVL----LLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELD 503 (1381)
T ss_pred HHH-HHHHHHHHHHHHHHHhh----ccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 111 11122222222222110 1123456777777888888888888888888888889999999999999765433
Q ss_pred cccCCCCCCCCCCCccEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECC
Q 000511 1203 LCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDG 1281 (1455)
Q Consensus 1203 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG 1281 (1455)
...... .+.-+.+-.|+++|.+|+++++ .++.|+||||+|++||.+||||++|||||||+++|+|-++..+|++.++|
T Consensus 504 ~~~~~~-~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g 582 (1381)
T KOG0054|consen 504 PDSVER-SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG 582 (1381)
T ss_pred cccccc-CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC
Confidence 211111 1222345579999999999863 44599999999999999999999999999999999999999999999988
Q ss_pred EeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHH
Q 000511 1282 LNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQR 1359 (1455)
Q Consensus 1282 ~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQr 1359 (1455)
. ++||||+|++|+|||||||.++.+++++...++++.|+|++.++.+ |-.|+|||+|.|||||||
T Consensus 583 s-------------iaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQK 649 (1381)
T KOG0054|consen 583 S-------------VAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQK 649 (1381)
T ss_pred e-------------EEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHH
Confidence 3 9999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHH-HHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHH
Q 000511 1360 QLICLARALLKSSKVLCLDECTANVDAQTASIL-QNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1360 Qrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I-~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eL 1438 (1455)
|||+||||++++++|.+||+|-|+||.++.+.| .+.|+...+++|+|.|||.++.+.+||+|+||++|+|+|.|+|+||
T Consensus 650 qRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el 729 (1381)
T KOG0054|consen 650 QRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEEL 729 (1381)
T ss_pred HHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHH
Confidence 999999999999999999999999999997765 5677777899999999999999999999999999999999999999
Q ss_pred hccCCcHHHHHHHh
Q 000511 1439 LQDECSVFSSFVRA 1452 (1455)
Q Consensus 1439 l~~~~s~f~~l~~~ 1452 (1455)
++. ++.|.++.++
T Consensus 730 ~~~-~~~~~~l~~~ 742 (1381)
T KOG0054|consen 730 LKS-GGDFAELAHE 742 (1381)
T ss_pred Hhc-chhHHHHhhc
Confidence 975 5688887544
No 88
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.2e-57 Score=522.75 Aligned_cols=481 Identities=22% Similarity=0.265 Sum_probs=360.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHH-HHHHHH
Q 000511 941 LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFIL-NILLAN 1019 (1455)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l-~~~~~~ 1019 (1455)
...+.++..++..+|...+.+.+.+.-.+++...+...+++|..--...+..+.++ |++.+...+...- ..++..
T Consensus 69 al~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~Lr----DL~qvR~Fltg~g~~A~fDa 144 (580)
T COG4618 69 ALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPLR----DLDQVRQFLTGTGLTAFFDA 144 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccchh----hHHHHHHHHcCCCcchhcCC
Confidence 34455667788889999999999999999999999999888876555444455444 5555554432110 011100
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHH
Q 000511 1020 FVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAK 1099 (1455)
Q Consensus 1020 ~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~ 1099 (1455)
-... ..+.+++...||+.++.+.-.++...+...-...+++--+..++....-..+..-+..+.++|+|.|......++
T Consensus 145 PW~P-~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~r 223 (580)
T COG4618 145 PWMP-LYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKR 223 (580)
T ss_pred chHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHH
Confidence 0011 122334445666655544433333333322223333333333444445556778889999999999998877777
Q ss_pred HHHHHHHH----HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 000511 1100 FKEHVVLY----QRTSYSELT---ASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLL 1172 (1455)
Q Consensus 1100 ~~~~~~~~----~~~~~~~~~---~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l 1172 (1455)
+.+....+ .++...... ..+-+-..+|. .+ .++.+.+. -.+..++|.+...-........++
T Consensus 224 W~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs---~i---Lg~GA~Lv-----i~ge~t~G~mIA~SIl~gRaLaPi 292 (580)
T COG4618 224 WGRFNAAYLSAQERASDRNGAFGALSRALRMALQS---AV---LGLGAWLV-----IKGEITPGMMIAGSILSGRALAPI 292 (580)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH---HH---HhcceeeE-----EcCcCCcchhhHHHHHhhhhhccH
Confidence 65544433 333322211 11111111111 11 11111111 134567777766666666677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEE
Q 000511 1173 GNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIV 1252 (1455)
Q Consensus 1173 ~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIv 1252 (1455)
...+..|.++..+..|..|+.++++..++....- ..| ..+|.+.++++++.=++..+|+|+|+||+++|||-+||+
T Consensus 293 d~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m-~LP---~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgII 368 (580)
T COG4618 293 DLAIANWKQFVAARQSYKRLNELLAELPAAAERM-PLP---APQGALSVERLTAAPPGQKKPILKGISFALQAGEALGII 368 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCC-CCC---CCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEE
Confidence 9999999999999999999999997665542211 111 136899999999976666679999999999999999999
Q ss_pred CCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCC-CCChHHHHHHHHH
Q 000511 1253 GRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEK 1331 (1455)
Q Consensus 1253 GrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~-~~~d~ei~~aL~~ 1331 (1455)
||||||||||.++|.|..+|.+|+|.+||-|+.+.+.+++-++|||.|||..||+|||.|||.-++ +.+++.|.+|.+.
T Consensus 369 GPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~l 448 (580)
T COG4618 369 GPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARL 448 (580)
T ss_pred CCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999997666 6677789999999
Q ss_pred hcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEe
Q 000511 1332 CHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITI 1408 (1455)
Q Consensus 1332 ~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~I 1408 (1455)
++.+|.|-.+ ||||.+||+|..|||||||||+||||++.+|++++||||.||||.+-|+.+.++|.+.. +++|+|+|
T Consensus 449 AgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvvi 528 (580)
T COG4618 449 AGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVI 528 (580)
T ss_pred cChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEE
Confidence 9999999999 99999999999999999999999999999999999999999999999999999997764 69999999
Q ss_pred ccChhhHhhhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1409 AHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1409 aHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
|||.+.+..+|+|+||++|++..+|+-+|.+++
T Consensus 529 aHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 529 AHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred ecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999999999999999874
No 89
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.7e-56 Score=515.94 Aligned_cols=539 Identities=19% Similarity=0.228 Sum_probs=386.1
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 266 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSG--HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 343 (1455)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 343 (1455)
++...+ .++.++..+++.++..+....-=++-..+|..-.-... .-.-++-+++.=+..+..++..+.-........
T Consensus 8 i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~At 86 (573)
T COG4987 8 LRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHDAT 86 (573)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 334444 56666666655554444333333333333332111111 112223344444556677777666666677788
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHhHHHHHHHH
Q 000511 344 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAW-SLP-FQIGVALYLLYTQVKFAFVSGL 421 (1455)
Q Consensus 344 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~-~~p-l~i~i~~~lL~~~lg~a~l~g~ 421 (1455)
.++-+.+.-.+|+|....+.........|++.|.+..|++.+++...-...-| .+. +.+++.+.+-+..++.+.+.++
T Consensus 87 frvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~ 166 (573)
T COG4987 87 FRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGL 166 (573)
T ss_pred HHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 89999999999999999998888888999999999999999998654332222 222 2233333344666777777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 422 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 501 (1455)
Q Consensus 422 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 501 (1455)
...++.+.+...+.+.-++..++..+.+..--+.+.+.+.|....+++|.++.+.+.+++.-..-.+.-++...+..+..
T Consensus 167 ~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~ 246 (573)
T COG4987 167 ILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSD 246 (573)
T ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555555555555566666666666666778899999999999999998888776543333333333333333333
Q ss_pred HHHHHHHHHH---HHHHHHHHHHhCCCCC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 000511 502 FFWATTPTLF---SLFTFGLFALMGHQLD-AAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 577 (1455)
Q Consensus 502 ~~~~~~~~~~---~~~~f~~~~~~~~~L~-~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~ 577 (1455)
++..+...+. .+++++.-. -.|..+ +..+...+..|..+..-....|.++..+.+...|.+|+.+.++.++....
T Consensus 247 a~~~l~~g~~v~~~l~w~a~~~-~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~ 325 (573)
T COG4987 247 AILLLIAGLLVIGLLLWMAAQV-GAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTF 325 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-cCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCC
Confidence 3322221111 122222211 223344 33333333334433321222236778888999999999999876543221
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000511 578 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 657 (1455)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~ 657 (1455)
. . ... ...+..++++|++|+|+..+ .++|+|+||++++||.++|+|++|||||||++.|.|.+
T Consensus 326 ~-~-~~~-----------~~~~~~l~~~~vsF~y~~~~----~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~ 388 (573)
T COG4987 326 P-D-EQT-----------ATTGQALELRNVSFTYPGQQ----TKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAW 388 (573)
T ss_pred C-c-ccc-----------CCccceeeeccceeecCCCc----cchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhcc
Confidence 1 0 000 11223789999999998642 34699999999999999999999999999999999999
Q ss_pred cCCCcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccc
Q 000511 658 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYI 723 (1455)
Q Consensus 658 ~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~i 723 (1455)
+|++|+|..+| .+++++|.+.+|++|+|||+..+++ -++|...++++..+|++-++..|+|.+|.+
T Consensus 389 ~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~l 468 (573)
T COG4987 389 DPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWL 468 (573)
T ss_pred CCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchh
Confidence 99999999987 5899999999999999999999886 467888999999999999999999999999
Q ss_pred cCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEe
Q 000511 724 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMD 803 (1455)
Q Consensus 724 g~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~ 803 (1455)
||+|..||||||||+||||++.+|++++||||||.+||+.|++++++. +.. ..+|||+|+||||+..++.+|+|++|+
T Consensus 469 ge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~l-l~~-~~~~kTll~vTHrL~~le~~drIivl~ 546 (573)
T COG4987 469 GEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLAL-LFE-HAEGKTLLMVTHRLRGLERMDRIIVLD 546 (573)
T ss_pred ccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHH-HHH-HhcCCeEEEEecccccHhhcCEEEEEE
Confidence 999999999999999999999999999999999999999999999987 444 577999999999999999999999999
Q ss_pred CCeEEEecCHHHHHhccccCcc
Q 000511 804 KGQVKWIGSSADLAVSLYSGFW 825 (1455)
Q Consensus 804 ~G~i~~~g~~~~l~~~~~~~~~ 825 (1455)
+|+++++|+|.+++.+++.+.+
T Consensus 547 ~Gkiie~G~~~~Ll~~~g~~~~ 568 (573)
T COG4987 547 NGKIIEEGTHAELLANNGRYKR 568 (573)
T ss_pred CCeeeecCCHHhhhccccHHHH
Confidence 9999999999999886655443
No 90
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.8e-56 Score=610.18 Aligned_cols=471 Identities=18% Similarity=0.207 Sum_probs=354.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000511 343 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGL 421 (1455)
Q Consensus 343 ~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~ 421 (1455)
+.+....+...+|++.++.+...++..+.|+++|.++.|++.+..... .+..+....+.++..+.++.....+.+++.+
T Consensus 1026 ~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i 1105 (1560)
T PTZ00243 1026 MRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALV 1105 (1560)
T ss_pred HHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445677889999999999999999999999999999999988544 3445555555555444443332223322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 422 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 501 (1455)
Q Consensus 422 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 501 (1455)
+++++...+..++.+..+..++......+.-.+.++|.++|+++||.|+.|+.+.++..+.-+...+...+......+..
T Consensus 1106 ~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~ 1185 (1560)
T PTZ00243 1106 PCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLG 1185 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223333344455555566666667777788999999999999999999999888876654444443333222222222
Q ss_pred HHHHHH--HHHHHHHHHHHH--HHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCch-
Q 000511 502 FFWATT--PTLFSLFTFGLF--ALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH- 576 (1455)
Q Consensus 502 ~~~~~~--~~~~~~~~f~~~--~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~- 576 (1455)
...... ..++.++.++++ ....+.++++.+..++.+...+..|+..+...+..+..+..|++||.+|++..+.++
T Consensus 1186 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~ 1265 (1560)
T PTZ00243 1186 VRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDM 1265 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 211111 111112222222 222345789988888888899999999999999999999999999999996422111
Q ss_pred -hhhh-------hcCCCCc------ccCCC----ccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEE
Q 000511 577 -ELEQ-------AANSPSY------ISNGL----SNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAV 638 (1455)
Q Consensus 577 -~~~~-------~~~~~~~------~~~~~----~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~i 638 (1455)
.... ....+.+ ..... .......+.|+|+|++|+|+++. +++|+|+||+|++||.++|
T Consensus 1266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~----~~vL~~vsf~I~~GekVaI 1341 (1560)
T PTZ00243 1266 PELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGL----PLVLRGVSFRIAPREKVGI 1341 (1560)
T ss_pred ccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCC----CceeecceEEECCCCEEEE
Confidence 0000 0000000 00000 00011235799999999997531 2369999999999999999
Q ss_pred EcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHH
Q 000511 639 IGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKA 705 (1455)
Q Consensus 639 vG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~ 705 (1455)
||++|||||||+++|+|.++|++|+|.++| .|+|+||+|.||+|||||||..+.++++++..++++.
T Consensus 1342 VGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~ 1421 (1560)
T PTZ00243 1342 VGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALEL 1421 (1560)
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHH
Confidence 999999999999999999999999999987 5999999999999999999988778899999999999
Q ss_pred hcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccC-CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEE
Q 000511 706 CTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG-SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRI 784 (1455)
Q Consensus 706 ~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~-~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~i 784 (1455)
|++++.++.+|+|.+|.+||+|.+||||||||++||||++++ |+|+|||||||+||+++++.|.+. +.. ..+++|+|
T Consensus 1422 a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~-L~~-~~~~~TvI 1499 (1560)
T PTZ00243 1422 VGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQAT-VMS-AFSAYTVI 1499 (1560)
T ss_pred CCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HCCCCEEE
Confidence 999999999999999999999999999999999999999996 899999999999999999988766 443 45789999
Q ss_pred EEccCccccccCCEEEEEeCCeEEEecCHHHHHhc
Q 000511 785 LCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 819 (1455)
Q Consensus 785 lvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1455)
+|+||++.+..||+|++|++|+|++.|+|+|++++
T Consensus 1500 ~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~ 1534 (1560)
T PTZ00243 1500 TIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMN 1534 (1560)
T ss_pred EEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 99999999999999999999999999999999864
No 91
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=7e-57 Score=573.86 Aligned_cols=199 Identities=22% Similarity=0.333 Sum_probs=162.1
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
..++++||+++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ +.++
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 469999999999543 4699999999999999999999999999999999999999999999875 3579
Q ss_pred EEEeCCCCCCCCcHHHhcC--c---CCCCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1297 AVVPQSPFLFEGSLRDNLD--P---FHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1297 ~~VpQdp~lf~gTIreNLd--p---~~~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
+|+||++. ...++.+|.. . +...+++++.++|+.. |++. ........||||||||++||||+++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~---------gl~~~~~~~~~~~LSgGqkqRvaLAraL~~ 644 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSF---------GVTGNLALQPMYTLSGGQKSRVAFAKITFK 644 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHC---------CCChHHhcCCccccCHHHHHHHHHHHHHhc
Confidence 99999973 2224444421 1 1122344455555444 4542 3344566899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEE-EeCChhHHh
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-EQGNPQTLL 1439 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv-e~G~p~eLl 1439 (1455)
+|++|||||||++||..+.+.+.+.+++. + .|||+|||+++.+.. ||||++|++|+++ ..|++++..
T Consensus 645 ~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 645 KPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 99999999999999999999999988764 4 599999999999986 8999999999998 568887753
No 92
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2.9e-55 Score=554.12 Aligned_cols=522 Identities=16% Similarity=0.116 Sum_probs=375.6
Q ss_pred HHH-HHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 269 ICC-AYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 347 (1455)
Q Consensus 269 l~~-~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r 347 (1455)
+++ .+++.++..+++.++..++....|.+++.+++..... .....+. +++..++..++.....+...+.+.++.
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (555)
T TIGR01194 11 LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFL-GQGSLFS----FGGLCLLALLFRIGADIFPAYAGMHII 85 (555)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cchHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566 7788888888899999999999999999887632111 1111111 112233444555566677788899999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHHH
Q 000511 348 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVAL-YLLYTQVKFAFVSGLAITIL 426 (1455)
Q Consensus 348 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~-~lL~~~lg~a~l~g~~v~~~ 426 (1455)
..+...+|+|.++++...+.+.++|++++.++.|++.+......+..+....+.+++++ ++++....++.+ .++++++
T Consensus 86 ~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li-~l~~~~~ 164 (555)
T TIGR01194 86 ANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAI-TISAIII 164 (555)
T ss_pred HHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHH
Confidence 99999999999999999888889999999999999999987655555554444443333 333333322222 2222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 427 LIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQ--IFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 504 (1455)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~--~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 504 (1455)
.+.+..+..++..+..++..+..++..+.+.|.+.|+++||.++.++ ...+++++.-++..+...+..........+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (555)
T TIGR01194 165 GTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFG 244 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455566677777888888899999999999999999999854 3333333322221121111111111111111
Q ss_pred HHHHHHHH--HHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhc
Q 000511 505 ATTPTLFS--LFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 582 (1455)
Q Consensus 505 ~~~~~~~~--~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 582 (1455)
.....+.. .+.++. ..+.++.+.+++++.+...+..|+..+...++.+.++.+|.+||.++++.++.++......
T Consensus 245 ~~~~~~~~~~~~~~~~---~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~ 321 (555)
T TIGR01194 245 QLLFFLLIGCALFAAA---MFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELS 321 (555)
T ss_pred HHHHHHHHHHHHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Confidence 11111111 111111 1257999999999999999999999999999999999999999999986422111000000
Q ss_pred CCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCc
Q 000511 583 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 662 (1455)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G 662 (1455)
.... ............++++|++|+|+..+. ..+++|+|+||++++|++++|+||||||||||+++|+|+++|++|
T Consensus 322 ~~~~---~~~~~~~~~~~~i~~~~v~f~y~~~~~-~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G 397 (555)
T TIGR01194 322 DADN---VLLLAHDKSVDSIELKDVHMNPKAPEG-SEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEG 397 (555)
T ss_pred cccc---ccccccCCCCceEEEEEEEEEeCCCCC-CcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCc
Confidence 0000 000000012356999999999974311 112469999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000511 663 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 729 (1455)
Q Consensus 663 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~ 729 (1455)
+|.++| .++||+|+|++|++|+++|+ ..+.++++..++++.++++++++.+|+|++|. .+
T Consensus 398 ~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~ 470 (555)
T TIGR01194 398 EILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TA 470 (555)
T ss_pred EEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----cc
Confidence 999986 48999999999999999996 33456778889999999999999999999984 78
Q ss_pred cccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEE
Q 000511 730 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKW 809 (1455)
Q Consensus 730 LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~ 809 (1455)
||||||||++||||++++|+|+|||||||+||+++++.+.+.++.....+++|+|+||||++.+..||+|++|++|++++
T Consensus 471 LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~ 550 (555)
T TIGR01194 471 LSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVK 550 (555)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999887643221235899999999999999999999999999986
Q ss_pred e
Q 000511 810 I 810 (1455)
Q Consensus 810 ~ 810 (1455)
.
T Consensus 551 ~ 551 (555)
T TIGR01194 551 D 551 (555)
T ss_pred e
Confidence 3
No 93
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-57 Score=509.70 Aligned_cols=520 Identities=22% Similarity=0.287 Sum_probs=384.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCC-chhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 283 LKVVNDSIGFAGPLLLNKLIKFLQQGSG-HLDGYVLAIALGLTSI---LKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKC 358 (1455)
Q Consensus 283 ~~l~~~~~~~~~P~ll~~li~~~~~~~~-~~~g~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~r~~L~~~iy~K~ 358 (1455)
+.++.-++...-|.+.+.+++.+..+.. .+......+.+.+++- +..++.+...+...++..-....+-..+|+|.
T Consensus 223 ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrHl 302 (790)
T KOG0056|consen 223 LLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRHL 302 (790)
T ss_pred HHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHHH
Confidence 3444556677789999999988874211 1111122223333321 23566666777666777767777888999999
Q ss_pred hcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH---HHHHHHH
Q 000511 359 LYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLI---PVNKWIA 435 (1455)
Q Consensus 359 L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v~~~~~---~~~~~~~ 435 (1455)
..++....-.+.+|++...|..-+..+.-.-..+..+-...+.+++++ .|..+..-...|+++++.+. .+...+.
T Consensus 303 h~LSlrwHL~rrtGeVLrvmdrGtssvtll~yvVF~i~PtllDl~va~--vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iT 380 (790)
T KOG0056|consen 303 HNLSLRWHLNRRTGEVLRVMDRGTSSVTLLEYVVFQIGPTLLDLGVAM--VYFFIKFNIWFGLIVFLMMLLYCYVTIKIT 380 (790)
T ss_pred HhhceeeeecccccceeehhccCcchhhHHHHHHhhcccHHHHhhhhh--hhhhhhHhHHHHHHHHHHHHHHhheeeeee
Confidence 999987766678899999987766666522223333434444455444 33334444444544433322 2222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 436 NLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLM----KTRSSEVKHLSTRKYLDAWCVFFWATTPTLF 511 (1455)
Q Consensus 436 ~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~----~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~ 511 (1455)
..-.++++++...-.+--..-.+.|-|-.+||.|+.|+...++.. +..++|-+.+.....+....+.+... .+.
T Consensus 381 eWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~l--gll 458 (790)
T KOG0056|consen 381 EWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGL--GLL 458 (790)
T ss_pred hhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh--HHh
Confidence 444455666655555555666788889999999999977665544 33444444443333333222221111 112
Q ss_pred HHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCC
Q 000511 512 SLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNG 591 (1455)
Q Consensus 512 ~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~ 591 (1455)
....+.+|.+..+.+++|...-+..++-.+.+|++.+......++...+-++|+.+.++.++...+. +..++
T Consensus 459 ~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~---P~a~p----- 530 (790)
T KOG0056|consen 459 AGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDL---PGAPP----- 530 (790)
T ss_pred hhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcC---CCCCC-----
Confidence 2233456767788899999888888999999999999999999999999999999999754322111 11111
Q ss_pred CccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC---
Q 000511 592 LSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--- 668 (1455)
Q Consensus 592 ~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--- 668 (1455)
.....+.|+++|++|+|+++ +++|+||||+++||+.+++|||+|+||||++++|.+.++..+|+|.++|
T Consensus 531 ---l~~~~G~i~fsnvtF~Y~p~-----k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdI 602 (790)
T KOG0056|consen 531 ---LKVTQGKIEFSNVTFAYDPG-----KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDI 602 (790)
T ss_pred ---ccccCCeEEEEEeEEecCCC-----CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchH
Confidence 12356789999999999754 3459999999999999999999999999999999999999999999997
Q ss_pred ----------cEEEEcCCCCCCCcCHHHHhccCCCC-CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 ----------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
+||.||||..|||.||..||.++++- ..|...++.+|++.++.|..+|+|++|.|||+|-.||||+|||
T Consensus 603 rnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQR 682 (790)
T KOG0056|consen 603 RNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQR 682 (790)
T ss_pred HHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhh
Confidence 59999999999999999999999863 4456667889999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 817 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 817 (1455)
||+||++.++|.|++|||+|||||.++++.|-.. +.. +..++|.|+|.||++.+-+||.|+++++|+|+|.|+|+|+.
T Consensus 683 VAiARtiLK~P~iIlLDEATSALDT~tER~IQaa-L~r-lca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl 760 (790)
T KOG0056|consen 683 VAIARTILKAPSIILLDEATSALDTNTERAIQAA-LAR-LCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELL 760 (790)
T ss_pred HHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHH-HHH-HhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHH
Confidence 9999999999999999999999999999987554 433 77899999999999999999999999999999999999998
Q ss_pred hc-cccCc
Q 000511 818 VS-LYSGF 824 (1455)
Q Consensus 818 ~~-~~~~~ 824 (1455)
.. ++.+.
T Consensus 761 ~rdgG~Ya 768 (790)
T KOG0056|consen 761 KRDGGAYA 768 (790)
T ss_pred hccCCcHH
Confidence 76 44433
No 94
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.5e-56 Score=544.00 Aligned_cols=484 Identities=23% Similarity=0.299 Sum_probs=338.2
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--cEEEEcCCCC
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPW 678 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~p~ 678 (1455)
.+.++|++++|.. +++|+|+||++.+|+.++|||+|||||||||++|.|+..|++|+|...+ ++||++|+|.
T Consensus 3 ~i~~~~ls~~~g~------~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~ 76 (530)
T COG0488 3 MITLENLSLAYGD------RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPP 76 (530)
T ss_pred eEEEeeeEEeeCC------ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCC
Confidence 4778899999842 3459999999999999999999999999999999999999999999986 7999999999
Q ss_pred CCCc-CHHHHhccCCCC-C--HHHHHHHH---------------------HHhcchHHHhhccCC--CcccccCCCCccc
Q 000511 679 ILSG-TIRDNILFGKNY-D--PQSYSETL---------------------KACTLDVDISLMVGG--DMAYIGEKGVNLS 731 (1455)
Q Consensus 679 l~~~-ti~~nI~~g~~~-~--~~~~~~v~---------------------~~~~l~~di~~l~~g--d~t~ig~~g~~LS 731 (1455)
.... ||+|.+..+... . ..+|+++. ....++.+++..-.| .... .....+||
T Consensus 77 ~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~LS 155 (530)
T COG0488 77 LDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSSLS 155 (530)
T ss_pred cCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhhcC
Confidence 9865 999999876421 0 01111111 111222233222222 1111 34557899
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEE-E
Q 000511 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK-W 809 (1455)
Q Consensus 732 GGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~-~ 809 (1455)
||||.||+|||||..+||+|||||||++||..+.+|+-+.+ . ..+| |+|+|||+.++|.. |++|+.+++|++. +
T Consensus 156 GG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L-~--~~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y 231 (530)
T COG0488 156 GGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYL-K--RYPG-TVIVVSHDRYFLDNVATHILELDRGKLTPY 231 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHH-H--hCCC-cEEEEeCCHHHHHHHhhheEEecCCceeEe
Confidence 99999999999999999999999999999999999998873 2 2345 99999999999997 9999999999864 6
Q ss_pred ecCHHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHHHh
Q 000511 810 IGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYA 889 (1455)
Q Consensus 810 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~ 889 (1455)
.|.|+...+..... . .. +. ...+..+++.++
T Consensus 232 ~Gny~~~~~~r~~~---------------~---------~~-----~~-------~~~~~~~~~~~~------------- 262 (530)
T COG0488 232 KGNYSSYLEQKAER---------------L---------RQ-----EA-------AAYEKQQKELAK------------- 262 (530)
T ss_pred cCCHHHHHHHHHHH---------------H---------HH-----HH-------HHHHHHHHHHHH-------------
Confidence 77777664321000 0 00 00 000000000000
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 890 KFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVK 969 (1455)
Q Consensus 890 ~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 (1455)
+..|+..
T Consensus 263 ----------------------------~~~~i~r--------------------------------------------- 269 (530)
T COG0488 263 ----------------------------EQEWIRR--------------------------------------------- 269 (530)
T ss_pred ----------------------------HHHHHHH---------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Q 000511 970 VHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYS 1049 (1455)
Q Consensus 970 lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~ 1049 (1455)
+..
T Consensus 270 ----------------------------~~~------------------------------------------------- 272 (530)
T COG0488 270 ----------------------------GKA------------------------------------------------- 272 (530)
T ss_pred ----------------------------HHh-------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1050 KLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLA 1129 (1455)
Q Consensus 1050 ~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~ 1129 (1455)
...++++
T Consensus 273 -----~~~~~k~-------------------------------------------------------------------- 279 (530)
T COG0488 273 -----AASKAKK-------------------------------------------------------------------- 279 (530)
T ss_pred -----ccchHHH--------------------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCcc-cccc-
Q 000511 1130 AFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY--MDVPQE-ELCG- 1205 (1455)
Q Consensus 1130 ~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~--~~~~~e-~~~~- 1205 (1455)
.+......+++.+- ...|.+ ....
T Consensus 280 ----------------------------------------------------a~sr~k~l~k~~~~~~~~~~~~~~~~~~ 307 (530)
T COG0488 280 ----------------------------------------------------AKSRIKRLEKLEARLAEERPVEEGKPLA 307 (530)
T ss_pred ----------------------------------------------------HHHHHHHHHHHHhhhhhcccccccccce
Confidence 00000111111110 000000 0000
Q ss_pred -CCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeC
Q 000511 1206 -YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNI 1284 (1455)
Q Consensus 1206 -~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di 1284 (1455)
...+++.-..+-.++++|+++.|+++ .++++++||.|++|++|||+||||+|||||+++|.|...|.+|+|.+.-
T Consensus 308 ~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~--- 383 (530)
T COG0488 308 FRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE--- 383 (530)
T ss_pred eeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC---
Confidence 00011111224479999999999755 6799999999999999999999999999999999999999999998853
Q ss_pred CCCChHHHhcccEEEeCCC-CCCC-CcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000511 1285 INTPVRDLRGRFAVVPQSP-FLFE-GSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1455)
Q Consensus 1285 ~~i~~~~lR~~i~~VpQdp-~lf~-gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1455)
.-++||.+|+- .+++ .|+-|++....+ ..+.++...|.+.++... .+......||||||-|
T Consensus 384 --------~v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~--------~~~~~v~~LSGGEk~R 447 (530)
T COG0488 384 --------TVKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGE--------DQEKPVGVLSGGEKAR 447 (530)
T ss_pred --------ceEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChH--------HHhCchhhcCHhHHHH
Confidence 13699999998 3443 388888865442 235677777766654321 1223334699999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEe-CChhHHh
Q 000511 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQ-GNPQTLL 1439 (1455)
Q Consensus 1362 l~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~-G~p~eLl 1439 (1455)
+.||+.++.+|++|||||||++||.+|.+.+.++|.++ +-|||+|||+.+.+.. |++|+++++ ++.++ |++++..
T Consensus 448 l~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~ 524 (530)
T COG0488 448 LLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYL 524 (530)
T ss_pred HHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHH
Confidence 99999999999999999999999999999999999765 4599999999999987 899999999 88887 8998887
Q ss_pred ccC
Q 000511 1440 QDE 1442 (1455)
Q Consensus 1440 ~~~ 1442 (1455)
+..
T Consensus 525 ~~~ 527 (530)
T COG0488 525 EQK 527 (530)
T ss_pred Hhh
Confidence 643
No 95
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=8e-55 Score=556.89 Aligned_cols=513 Identities=15% Similarity=0.127 Sum_probs=389.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcc----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 896 ITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYS----TSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVH 971 (1455)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh 971 (1455)
.+++.+++.++...+....+++.+...+.....+ ... ...++++++++.++..+..++...+......+...++|
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~-~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~ 175 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRS-PRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLY 175 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555556666666777766665421111 111 11233334444455555556666666677778888888
Q ss_pred HHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHHHH
Q 000511 972 NTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSY-VQVFFLLLLVPFWFIYSK 1050 (1455)
Q Consensus 972 ~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~-~~~~~~l~~~p~~~~~~~ 1050 (1455)
++.+++....++.|||. ++|++.+|+++|++.+.+.+...+..++..++.+++.++.+.. .+|.+.++++...++...
T Consensus 176 ~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~ 254 (659)
T TIGR00954 176 SKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGV 254 (659)
T ss_pred HHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 88888888889999997 7899999999999999999988888888888888877766664 566655555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1051 LQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAA 1130 (1455)
Q Consensus 1051 i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~ 1130 (1455)
+.+++.+..+++.+......+.+.+.+.|.++|+++||+|+.|+.+.+++.+..++..+..+.......++....+++..
T Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 334 (659)
T TIGR00954 255 VLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAK 334 (659)
T ss_pred HHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 56666666666666677777888999999999999999999999999999999999888888887777777776666543
Q ss_pred HH---HHHHHH-HHHHhhcCCCCCCcchHHH-HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccc
Q 000511 1131 FI---ISFIAT-MAVIGSRGNLPATFSTPGL-VGLALSY---AAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1202 (1455)
Q Consensus 1131 ~~---~~~~~~-~~v~~~~~~~~~~~~~~g~-vgl~l~~---~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~ 1202 (1455)
.. +..+.. ..++...+ ...+..+.|. ++..+.+ ...+..++..+...+.++....++.+|+.++.+.++|.
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~-~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~ 413 (659)
T TIGR00954 335 YTWSAVGLVAVSIPIFDKTH-PAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDV 413 (659)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 111111 11221110 0012344443 3333333 56668889999999999999999999999999764432
Q ss_pred ccc-------CC-C------------C--CCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHH
Q 000511 1203 LCG-------YQ-S------------L--SPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKS 1260 (1455)
Q Consensus 1203 ~~~-------~~-~------------~--~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKS 1260 (1455)
... .. . + .......+.|+++||+++|+++ +++|+|+||+|++||++||+|+||||||
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKS 492 (659)
T TIGR00954 414 KSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKS 492 (659)
T ss_pred hcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHH
Confidence 100 00 0 0 0001134679999999999643 4699999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCC--------CCChHHHHHHHHHh
Q 000511 1261 SILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH--------MNDDLKIWSVLEKC 1332 (1455)
Q Consensus 1261 TLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~--------~~~d~ei~~aL~~~ 1332 (1455)
||+++|.|+++|++|+|.+|+ |+++++|||+|.+|++|+|||+.... ..++++++++++.+
T Consensus 493 TLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~ 561 (659)
T TIGR00954 493 SLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNV 561 (659)
T ss_pred HHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHc
Confidence 999999999999999999874 67899999999999999999997532 24678899999999
Q ss_pred cHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccC
Q 000511 1333 HVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHR 1411 (1455)
Q Consensus 1333 ~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHr 1411 (1455)
++.+.++.- |+|+..+. +.+||||||||++||||++++|+++|||||||+||+++++.+++.+++. ++|+|+||||
T Consensus 562 ~l~~~~~~~~g~~~~~~~-~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~ 638 (659)
T TIGR00954 562 QLTHILEREGGWSAVQDW-MDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHR 638 (659)
T ss_pred CCHHHHhhcCCccccccc-ccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCc
Confidence 999988766 99998764 5699999999999999999999999999999999999999999999874 8999999999
Q ss_pred hhhHhhhCEEEEEeC
Q 000511 1412 ISTVLNMDEILILDH 1426 (1455)
Q Consensus 1412 l~ti~~~DrI~vl~~ 1426 (1455)
++++..||+|++|+.
T Consensus 639 ~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 639 KSLWKYHEYLLYMDG 653 (659)
T ss_pred hHHHHhCCEEEEEeC
Confidence 999999999999973
No 96
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=3.5e-56 Score=558.67 Aligned_cols=191 Identities=21% Similarity=0.321 Sum_probs=161.0
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.++++|++++|++ ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 5899999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEeCCCCC-CCCcHHHhcCcCC-CCC-hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1298 VVPQSPFL-FEGSLRDNLDPFH-MND-DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1298 ~VpQdp~l-f~gTIreNLdp~~-~~~-d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
|+||++.+ ++.|+++|+.... ... +... .+.++.+|++.........||||||||++|||||+++|+|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~---------~~~L~~l~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p~l 474 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYK---------SEIIKPLQLERLLDKNVKDLSGGELQRVAIAACLSRDADL 474 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHH---------HHHHHHCCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999875 4569999986431 111 1122 3344445665555666678999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCC
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1434 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1434 (1455)
|||||||++||.++...+.+.|++.. .++|+|+|||+++.+.. ||||++|+ |++...|+
T Consensus 475 lLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~-~~~~~~g~ 536 (590)
T PRK13409 475 YLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFE-GEPGKHGH 536 (590)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEc-Ccceeeee
Confidence 99999999999999999999998864 37899999999999875 89999996 48877766
No 97
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.6e-53 Score=582.50 Aligned_cols=539 Identities=17% Similarity=0.244 Sum_probs=384.4
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCC--cchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 883 TVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTK--YSTSFYLVVLCIFCMFNSFLTLVRAFSFA 960 (1455)
Q Consensus 883 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 960 (1455)
+..+..++..+|..+... +..++..++...+++.+...++........ .....|++.++++.++..++.....+...
T Consensus 69 ~L~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~ 147 (1490)
T TIGR01271 69 KLLNALRRCFFWRFVFYG-ILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLH 147 (1490)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444554454443333 223444555566666666554432111111 11222333444444555555555566666
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 000511 961 FGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLL 1040 (1455)
Q Consensus 961 ~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~ 1040 (1455)
..+.+....+...+++++++.+...+++.++|+++|+++.|++.++..+.... .+....+.++..++++.....+..++
T Consensus 148 ~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~-~~~~~pi~i~~~~~lL~~~~G~~~l~ 226 (1490)
T TIGR01271 148 HLGMQMRIALFSLIYKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAH-FVWIAPLQVILLMGLIWELLEVNGFC 226 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777778888888999999999999999999999999999999998765543 23333344444444444444444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1041 LVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLW 1120 (1455)
Q Consensus 1041 ~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w 1120 (1455)
.+.+++++..++.+..+.....++..............|.++|+++||.|+||+.|.+++.+..+...+..........|
T Consensus 227 ~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~ 306 (1490)
T TIGR01271 227 GLGFLILLALFQACLGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYF 306 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344444444444445555555556666778899999999999999999999998887766655544333322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 000511 1121 LSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLL-GNFLSSFTETEKEMVSLERVLEYMDVP 1199 (1455)
Q Consensus 1121 l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l-~~l~~~~~~~e~~~~s~~Ri~~~~~~~ 1199 (1455)
..... .....++.++.+...... ...+++.+..++++...+..++ ..+...+..+.++.+|++||.+|++.+
T Consensus 307 ~~~~~-~~~~~~~~~~~f~~y~~~------~~~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~ 379 (1490)
T TIGR01271 307 YSSAF-FFSGFFVVFLSVVPYALI------KGIILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKE 379 (1490)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 21111 111111111111111111 1124555555566665555554 457777888888999999999999765
Q ss_pred ccccccCCCCCCCCCCCccEEEEEEEEEecCC--------------------------------CCcceeeeeEEEeCCc
Q 000511 1200 QEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS--------------------------------LPAALHDINFTIEGGT 1247 (1455)
Q Consensus 1200 ~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~--------------------------------~~~vL~~isl~I~~Ge 1247 (1455)
+.+.... . +....|+++|++|.|+.. .+++|+|+||+|++||
T Consensus 380 e~~~~~~-----~-~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~ 453 (1490)
T TIGR01271 380 EYKTLEY-----N-LTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQ 453 (1490)
T ss_pred ccccccc-----c-CCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCC
Confidence 4321110 0 112358888888888421 1368999999999999
Q ss_pred EEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHH
Q 000511 1248 QVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWS 1327 (1455)
Q Consensus 1248 kvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~ 1327 (1455)
+++|+||+|||||||+++|+|+++|++|+|.+|| +++||||+|++|++||||||.++..+++++..+
T Consensus 454 ~~~I~G~~GsGKSTLl~~l~G~~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~ 520 (1490)
T TIGR01271 454 LLAVAGSTGSGKSSLLMMIMGELEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTS 520 (1490)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccccchHHHHH
Confidence 9999999999999999999999999999999998 599999999999999999998776666677888
Q ss_pred HHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHH-HHHHhcCCcE
Q 000511 1328 VLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQN-AISSECKGMT 1404 (1455)
Q Consensus 1328 aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~-~i~~~~~~~T 1404 (1455)
+++.|++.+.++.+ |.+|.+|++|.+||||||||++||||++++|+|+|||||||+||+++++.|.+ .+++..+++|
T Consensus 521 ~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~t 600 (1490)
T TIGR01271 521 VIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKT 600 (1490)
T ss_pred HHHHHhHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCe
Confidence 99999999999988 89999999999999999999999999999999999999999999999999987 4677778999
Q ss_pred EEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHH
Q 000511 1405 VITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1450 (1455)
Q Consensus 1405 vI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~ 1450 (1455)
+|+|||+++.+..||+|++|++|++++.|+++++.+.. +.|.+.+
T Consensus 601 vilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~~~~-~~~~~~~ 645 (1490)
T TIGR01271 601 RILVTSKLEHLKKADKILLLHEGVCYFYGTFSELQAKR-PDFSSLL 645 (1490)
T ss_pred EEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHHHhcC-hHHHHHH
Confidence 99999999999999999999999999999999998753 4566655
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=9.9e-53 Score=531.09 Aligned_cols=508 Identities=17% Similarity=0.154 Sum_probs=362.2
Q ss_pred hHHHHHHHHhHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 265 LVRAICCAYGYPYICLGLLKVVNDSIGFAG-PLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 343 (1455)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 343 (1455)
+++.+++.+++.++...++.++..++.+.. |++.+.++|.+.. .....+.+++.+++. .++.....+...+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADT--SLLVLPEFLGLLLLL----MAVTLGSQLALTTLG 76 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cchHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 567778888888888888889988888874 7788888886542 111111111111111 223344556667788
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000511 344 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 423 (1455)
Q Consensus 344 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v 423 (1455)
.++...+...+|+|.++++...+++.++|++++.++.|++.+......+..++...+.+++++++++..-...+++.+++
T Consensus 77 ~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 156 (547)
T PRK10522 77 HHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAIW 156 (547)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 88888899999999999999888888999999999999999987655566677777766665554444333333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 424 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYG--WEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 501 (1455)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g--~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 501 (1455)
+++...+..++.++..+..++.++..++..+.+.|.++|++++++.+ .++.+.++..+..++-.+...+.........
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (547)
T PRK10522 157 MAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAV 236 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 44445566777888888888999999999999999999999997433 2234444444432222222112221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC---CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhh
Q 000511 502 FFWATTPTLFSLFTFGLFALMGH---QLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHEL 578 (1455)
Q Consensus 502 ~~~~~~~~~~~~~~f~~~~~~~~---~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~ 578 (1455)
.+.. +...+.++.+.+.++ ..+.+.+.+...+...+..|+..+...++.+.++..+++|+.+++..++..+..
T Consensus 237 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~ 312 (547)
T PRK10522 237 NWSN----IMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFP 312 (547)
T ss_pred HHHH----HHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 1111 111112222222221 122222222222333467899999999999999999999999998654321100
Q ss_pred hhhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc
Q 000511 579 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 658 (1455)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~ 658 (1455)
. ..+ .+....++++|++|+|+.+ + ++|+|+||++++|+.++|+||||||||||+++|+|+++
T Consensus 313 -~--~~~----------~~~~~~i~~~~v~f~y~~~--~---~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~ 374 (547)
T PRK10522 313 -R--PQA----------FPDWQTLELRNVTFAYQDN--G---FSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQ 374 (547)
T ss_pred -c--ccc----------cCcCceEEEEEEEEEeCCC--C---eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 0 000 0112469999999999732 2 35999999999999999999999999999999999999
Q ss_pred CCCcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccC
Q 000511 659 LTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGE 725 (1455)
Q Consensus 659 ~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~ 725 (1455)
|++|+|.++| +++||+|+|++|++|++|| +.+.+++...++++.+++..++.. ++|. .
T Consensus 375 ~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~ 445 (547)
T PRK10522 375 PQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----I 445 (547)
T ss_pred CCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----C
Confidence 9999999876 5999999999999999999 456677788888888888776652 3321 2
Q ss_pred CCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccccCCEEEEEeC
Q 000511 726 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDK 804 (1455)
Q Consensus 726 ~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~ 804 (1455)
+|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+ .... .+++|+|+|||+++.+..||+|++|++
T Consensus 446 ~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l-~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 524 (547)
T PRK10522 446 SNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVL-LPLLQEMGKTIFAISHDDHYFIHADRLLEMRN 524 (547)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHH-HHHHHhCCCEEEEEEechHHHHhCCEEEEEEC
Confidence 48899999999999999999999999999999999999999888763 2212 247899999999999999999999999
Q ss_pred CeEEEe
Q 000511 805 GQVKWI 810 (1455)
Q Consensus 805 G~i~~~ 810 (1455)
|++++.
T Consensus 525 G~i~e~ 530 (547)
T PRK10522 525 GQLSEL 530 (547)
T ss_pred CEEEEe
Confidence 999865
No 99
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-53 Score=504.37 Aligned_cols=442 Identities=25% Similarity=0.349 Sum_probs=334.3
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|++-+|+. ..+|+|+||++.+||+++++|.||+|||||+|.|.|.++|++|+|.++|
T Consensus 7 ~ll~~~~i~K~Fgg------V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A 80 (500)
T COG1129 7 PLLELRGISKSFGG------VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDA 80 (500)
T ss_pred ceeeeecceEEcCC------ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHH
Confidence 45789999988864 2459999999999999999999999999999999999999999999987
Q ss_pred ---cEEEEcCCCCCCC-cCHHHHhccCCCC-------CHHHH----HHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000511 669 ---SIAYVPQVPWILS-GTIRDNILFGKNY-------DPQSY----SETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~~-------~~~~~----~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGG 733 (1455)
.|+.|.|++-|+. -||.|||.+|++. |..+. +++++..++..| ......+||+|
T Consensus 81 ~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~-----------~~~~v~~Lsia 149 (500)
T COG1129 81 LAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID-----------PDTLVGDLSIA 149 (500)
T ss_pred HhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC-----------hhhhhhhCCHH
Confidence 4999999999875 5999999888653 32322 223333332211 23345589999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecC
Q 000511 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 812 (1455)
Q Consensus 734 QkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 812 (1455)
|||-|+||||++.+++|+|||||||+|+.+..+++|+. +.....+|.++|+|||+++.+.. ||+|.||+||+.+..++
T Consensus 150 qrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~-ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 150 QRQMVEIARALSFDARVLILDEPTAALTVKETERLFDL-IRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecc
Confidence 99999999999999999999999999999999999986 44435678999999999998765 99999999999875432
Q ss_pred H-HHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHHHhhh
Q 000511 813 S-ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKF 891 (1455)
Q Consensus 813 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~ 891 (1455)
. .++ +.++. +.
T Consensus 229 ~~~~~------------------------------------------------~~~~l----------v~---------- 240 (500)
T COG1129 229 TAAET------------------------------------------------SEDEL----------VR---------- 240 (500)
T ss_pred cccCC------------------------------------------------CHHHH----------HH----------
Confidence 1 000 00000 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 892 SGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVH 971 (1455)
Q Consensus 892 ~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh 971 (1455)
++
T Consensus 241 -----------------------------~M------------------------------------------------- 242 (500)
T COG1129 241 -----------------------------LM------------------------------------------------- 242 (500)
T ss_pred -----------------------------Hh-------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000511 972 NTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKL 1051 (1455)
Q Consensus 972 ~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i 1051 (1455)
.|
T Consensus 243 -------------------vG----------------------------------------------------------- 244 (500)
T COG1129 243 -------------------VG----------------------------------------------------------- 244 (500)
T ss_pred -------------------hC-----------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1052 QFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAF 1131 (1455)
Q Consensus 1052 ~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~ 1131 (1455)
|++
T Consensus 245 --------r~~--------------------------------------------------------------------- 247 (500)
T COG1129 245 --------REL--------------------------------------------------------------------- 247 (500)
T ss_pred --------cch---------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCC
Q 000511 1132 IISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSP 1211 (1455)
Q Consensus 1132 ~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~ 1211 (1455)
.+..++. +.
T Consensus 248 ----------------------------------------------------------------~~~~~~~-------~~ 256 (500)
T COG1129 248 ----------------------------------------------------------------EDLFPEP-------PE 256 (500)
T ss_pred ----------------------------------------------------------------hhhcccc-------cc
Confidence 0000000 00
Q ss_pred CCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCC-hH
Q 000511 1212 DWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VR 1290 (1455)
Q Consensus 1212 ~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~-~~ 1290 (1455)
.-+..-.++++|++.. ..++|+||++++||.+||.|=-|||+|-++.+|+|.-++.+|+|.+||.++.--+ .+
T Consensus 257 ~~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~ 330 (500)
T COG1129 257 EGIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRD 330 (500)
T ss_pred cCCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHH
Confidence 0011224677777642 2589999999999999999999999999999999999999999999999887655 55
Q ss_pred HHhcccEEEeCCCC---CC-CCcHHHhcCcCC--CCChH-HHHHHHHHhcHHHHHHhCCCchh-hhcCCCCCChhHHHHH
Q 000511 1291 DLRGRFAVVPQSPF---LF-EGSLRDNLDPFH--MNDDL-KIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~---lf-~gTIreNLdp~~--~~~d~-ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQrl 1362 (1455)
..+..|+|||-|-- +| ..||++|+.... .+... -+...-++.-..++++.++..+. ....-.+||||.+|++
T Consensus 331 Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~~LSGGNQQKV 410 (500)
T COG1129 331 AIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPIGTLSGGNQQKV 410 (500)
T ss_pred HHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchhhcCCchhhhhH
Confidence 88889999999874 44 569999996431 11100 13333444445666777633322 1122337999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhH
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQT 1437 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~e 1437 (1455)
+|||.|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+|+-.+..+. .||||+||.+|+++..=+.++
T Consensus 411 vlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~~ 487 (500)
T COG1129 411 VLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGELDREE 487 (500)
T ss_pred HHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEecccc
Confidence 99999999999999999999999999999999999875 5899999999999987 599999999999987544333
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.6e-50 Score=514.12 Aligned_cols=516 Identities=16% Similarity=0.170 Sum_probs=375.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 276 PYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 355 (1455)
Q Consensus 276 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~~iy 355 (1455)
.++...++.++.+++....|.+.+.++|.+.+.+.... ...++.++++.++.+++.....|...++..++|..+...++
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f-~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~ 175 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNF-AWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLY 175 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778888889999999999999998764322111 10111122223333444444445555566666666666666
Q ss_pred HHHhcC----CccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHH
Q 000511 356 QKCLYV----RLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAF-VSGLAITILLIP 429 (1455)
Q Consensus 356 ~K~L~l----~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~-l~g~~v~~~~~~ 429 (1455)
++.++. +...+++ +.|++.+.+++|++.+.+... .+..+...++.++.+++.++..+++.. ++.++.+++...
T Consensus 176 ~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~ 254 (659)
T TIGR00954 176 SKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGV 254 (659)
T ss_pred HHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 665553 3333333 579999999999999987554 456666777777777777776666643 333344455556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000511 430 VNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP- 508 (1455)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~- 508 (1455)
+..++.+++.+..++..+..++-.+..+|.++|+++||+|+.|+.+.+++++.-++-.+...+.....+....+.....
T Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 334 (659)
T TIGR00954 255 VLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAK 334 (659)
T ss_pred HHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 6777888888999999999999999999999999999999999998888877666656666555555554444432222
Q ss_pred ---HHHHHHHHHHHHHh-C----CCCCHhHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCch
Q 000511 509 ---TLFSLFTFGLFALM-G----HQLDAAMVFT-C---LALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH 576 (1455)
Q Consensus 509 ---~~~~~~~f~~~~~~-~----~~L~~~~~ft-~---l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~ 576 (1455)
..+..+..+...+. . +.+|.+..+. + ..++..+..|+..+...+..+.++.++.+||.++++.++..+
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~ 414 (659)
T TIGR00954 335 YTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVK 414 (659)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12222223332222 2 5788887554 2 334677799999999999999999999999999996532111
Q ss_pred hhh-hhcCCCC-----------cccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCC
Q 000511 577 ELE-QAANSPS-----------YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGS 644 (1455)
Q Consensus 577 ~~~-~~~~~~~-----------~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~Gs 644 (1455)
... .....+. ....+..........++++|++|.|+.+ +++|+|+||++++||.++|+|||||
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-----~~il~~isl~i~~Ge~~~IvG~nGs 489 (659)
T TIGR00954 415 SGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-----DVLIESLSFEVPSGNHLLICGPNGC 489 (659)
T ss_pred cccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-----CeeeecceEEECCCCEEEEECCCCC
Confidence 000 0000000 0000000011123469999999988632 2359999999999999999999999
Q ss_pred cHHHHHHHHhcCccCCCcEEEEcC--cEEEEcCCCCCCCcCHHHHhccCC--------CCCHHHHHHHHHHhcchHHHhh
Q 000511 645 GKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWILSGTIRDNILFGK--------NYDPQSYSETLKACTLDVDISL 714 (1455)
Q Consensus 645 GKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~p~l~~~ti~~nI~~g~--------~~~~~~~~~v~~~~~l~~di~~ 714 (1455)
|||||+++|+|++++++|+|.+++ .++||+|+|+++++|++|||.++. ..++++..++++.+++++.++.
T Consensus 490 GKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~ 569 (659)
T TIGR00954 490 GKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER 569 (659)
T ss_pred CHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh
Confidence 999999999999999999998864 699999999999999999999874 2456677889999999887776
Q ss_pred ccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc
Q 000511 715 MVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS 794 (1455)
Q Consensus 715 l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~ 794 (1455)
|.|++|..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+.+. +.. .++|+|+|||+++.++
T Consensus 570 -~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~-l~~---~~~tvI~isH~~~~~~ 643 (659)
T TIGR00954 570 -EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRL-CRE---FGITLFSVSHRKSLWK 643 (659)
T ss_pred -cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHH---cCCEEEEEeCchHHHH
Confidence 999999876 5679999999999999999999999999999999999999988876 322 3789999999999999
Q ss_pred cCCEEEEEeC
Q 000511 795 AADMVVVMDK 804 (1455)
Q Consensus 795 ~ad~i~~l~~ 804 (1455)
.||+|++|+.
T Consensus 644 ~~d~il~l~~ 653 (659)
T TIGR00954 644 YHEYLLYMDG 653 (659)
T ss_pred hCCEEEEEeC
Confidence 9999999973
No 101
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2e-52 Score=478.39 Aligned_cols=236 Identities=34% Similarity=0.623 Sum_probs=225.8
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
|.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|.+||+++..++...+|+++
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999997656679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1297 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1297 ~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||||+|.+|++|+++|+++++..++++++++++.+++.++++.+ ++|+.++++|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999988777889999999999999999988 999999999999999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHhhC
Q 000511 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1454 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~~g 1454 (1455)
|||||||++||+++++.+++.|++.++++|||+||||++++..||||++|++|+++|.|+|++|++++ +.|++++++++
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~-~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEK-SHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCc-HHHHHHHhhcc
Confidence 99999999999999999999999888899999999999999999999999999999999999999965 79999998765
No 102
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8e-51 Score=456.66 Aligned_cols=467 Identities=19% Similarity=0.254 Sum_probs=355.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000511 342 LKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYLLYTQVKFAFVSG 420 (1455)
Q Consensus 342 ~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~i~~~lL~~~lg~a~l~g 420 (1455)
++......+.-..|.|++.|+.....+..+|.+..-+.--..-|....++ +..+....++++++..++++..||.....
T Consensus 9 v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~ 88 (497)
T COG5265 9 VGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALT 88 (497)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHH
Confidence 33344445666788999999887766666776655554444445554443 34455667889999999999999877665
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 421 LAITILLIPVNKWIA-NLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAW 499 (1455)
Q Consensus 421 ~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~ 499 (1455)
.++.+++..+-.+.. ..-...+++.+++-.+......+.|-+-.++|.||-|+.+..+..+..+..-+...|......+
T Consensus 89 t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~ 168 (497)
T COG5265 89 TLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLV 168 (497)
T ss_pred HHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHH
Confidence 555555443333222 2222334444444445556777999999999999999988877766544333332222221222
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 000511 500 CVFFWAT--TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 577 (1455)
Q Consensus 500 ~~~~~~~--~~~~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~ 577 (1455)
.++.... ...+....+.+...+..+.+|.+...-.-++...+..|++.+......+-+++.-.+++.+.+..+-....
T Consensus 169 Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d 248 (497)
T COG5265 169 LNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSD 248 (497)
T ss_pred HHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhcc
Confidence 2111110 01111223333444567889999999999999999999999999999999999999999888865421111
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000511 578 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 657 (1455)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~ 657 (1455)
. ...++. .......+.|++++|.|.++ +++|+++||++++|+.++|||++|+||||++++|.+++
T Consensus 249 ~---pda~~L-------~~~~~g~v~F~~V~F~y~~~-----r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFy 313 (497)
T COG5265 249 A---PDAPPL-------WPVRLGAVAFINVSFAYDPR-----RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFY 313 (497)
T ss_pred C---CCCccc-------cccccceEEEEEEEeecccc-----chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHh
Confidence 0 001110 00234679999999999754 44599999999999999999999999999999999999
Q ss_pred cCCCcEEEEcC-------------cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccc
Q 000511 658 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYI 723 (1455)
Q Consensus 658 ~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~i 723 (1455)
++.+|.|.++| .||.|||+..|||.|+..||.+|++ ..++...++.++.++.+.|+.+|+|++|.|
T Consensus 314 D~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~V 393 (497)
T COG5265 314 DVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGV 393 (497)
T ss_pred CCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhccc
Confidence 99999999987 4999999999999999999999986 456778889999999999999999999999
Q ss_pred cCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEe
Q 000511 724 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMD 803 (1455)
Q Consensus 724 g~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~ 803 (1455)
||+|-.||||+|||||+||++.++|+|++|||+|||||.+|++.|... +.. ..+|+|.+++.||++.+-.||.|+||+
T Consensus 394 gerglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~-l~~-~~~~rttlviahrlsti~~adeiivl~ 471 (497)
T COG5265 394 GERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAA-LRE-VSAGRTTLVIAHRLSTIIDADEIIVLD 471 (497)
T ss_pred chheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHH-HHH-HhCCCeEEEEeehhhhccCCceEEEee
Confidence 999999999999999999999999999999999999999999988776 443 668999999999999999999999999
Q ss_pred CCeEEEecCHHHHHhccccCcc
Q 000511 804 KGQVKWIGSSADLAVSLYSGFW 825 (1455)
Q Consensus 804 ~G~i~~~g~~~~l~~~~~~~~~ 825 (1455)
+|+|+|.|+|+||++.++.+.+
T Consensus 472 ~g~i~erg~h~~ll~~~g~ya~ 493 (497)
T COG5265 472 NGRIVERGTHEELLAAGGLYAE 493 (497)
T ss_pred CCEEEecCcHHHHHHcCChHHH
Confidence 9999999999999988765543
No 103
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=9e-51 Score=468.86 Aligned_cols=442 Identities=26% Similarity=0.386 Sum_probs=343.1
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..+++++.+-.|+. ..+++||||++++||+.++.|.||+|||||++.|.|.++|++|+|.++|
T Consensus 3 ~~l~~~~itK~f~~------~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA 76 (501)
T COG3845 3 PALEMRGITKRFPG------VVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDA 76 (501)
T ss_pred ceEEEeccEEEcCC------EEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHH
Confidence 46788999988862 2459999999999999999999999999999999999999999999988
Q ss_pred ---cEEEEcCCCCCCCc-CHHHHhccCCCC------C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000511 669 ---SIAYVPQVPWILSG-TIRDNILFGKNY------D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~------~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQ 734 (1455)
.||.|.|++-|+.. ||.|||..|.+- | .++.++..+.++++-|.+ ++...||=|+
T Consensus 77 ~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~-----------~~V~dLsVG~ 145 (501)
T COG3845 77 IRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPD-----------AKVADLSVGE 145 (501)
T ss_pred HHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcc-----------ceeecCCcch
Confidence 49999999998866 999999998753 2 245666777777766543 3455899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCH
Q 000511 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 813 (1455)
Q Consensus 735 kqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~ 813 (1455)
||||.|-+|||++|++||||||||.|-|...+++|+. +......|+|||+|||++..+.. ||++-||++|+++..-+
T Consensus 146 qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~-l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~- 223 (501)
T COG3845 146 QQRVEILKALYRGARLLILDEPTAVLTPQEADELFEI-LRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVD- 223 (501)
T ss_pred hHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeec-
Confidence 9999999999999999999999999999999999987 33335569999999999999776 99999999999753211
Q ss_pred HHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCcchhhHHHHHHHhcCcchhHHHHHHhhhhh
Q 000511 814 ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG 893 (1455)
Q Consensus 814 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 893 (1455)
.. . +. +.+++
T Consensus 224 -~~-----------~---------------------------~~-------t~~el------------------------ 233 (501)
T COG3845 224 -PV-----------A---------------------------ET-------TEEEL------------------------ 233 (501)
T ss_pred -CC-----------C---------------------------CC-------CHHHH------------------------
Confidence 00 0 00 00000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 894 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 973 (1455)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 973 (1455)
.- ++
T Consensus 234 ---------a~-lM------------------------------------------------------------------ 237 (501)
T COG3845 234 ---------AE-LM------------------------------------------------------------------ 237 (501)
T ss_pred ---------HH-Hh------------------------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 974 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1053 (1455)
Q Consensus 974 ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~ 1053 (1455)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1054 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1133 (1455)
Q Consensus 1054 ~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 1133 (1455)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCC
Q 000511 1134 SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW 1213 (1455)
Q Consensus 1134 ~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~w 1213 (1455)
+ + ... . .+.+ .++.-
T Consensus 238 -------v-G--~~v--~----------------------------------------------~~~~-------~~~~~ 252 (501)
T COG3845 238 -------V-G--REV--V----------------------------------------------LRVV-------KPPST 252 (501)
T ss_pred -------c-C--Ccc--c----------------------------------------------cccc-------cCCCC
Confidence 0 0 000 0 0000 01111
Q ss_pred CCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeC-CCCChHHH
Q 000511 1214 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNI-INTPVRDL 1292 (1455)
Q Consensus 1214 p~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di-~~i~~~~l 1292 (1455)
|..-.++++|++..-+.+ -+.+++|||+|++||.+||.|-.|-|-+-|+.+|.|+..|.+|+|.++|.|+ ...+....
T Consensus 253 pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~ 331 (501)
T COG3845 253 PGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRER 331 (501)
T ss_pred CCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHH
Confidence 334468999999865432 3689999999999999999999999999999999999999999999999997 66677777
Q ss_pred hc-ccEEEeCCCC----CCCCcHHHhcCcCCCCCh-----H-HHHHHHHHhcHHHHHHhC-----CCchhhhcCCCCCCh
Q 000511 1293 RG-RFAVVPQSPF----LFEGSLRDNLDPFHMNDD-----L-KIWSVLEKCHVKEEVEAV-----GLETFVKESGISFSV 1356 (1455)
Q Consensus 1293 R~-~i~~VpQdp~----lf~gTIreNLdp~~~~~d-----~-ei~~aL~~~~l~~~i~~l-----gLdt~v~e~G~~LSg 1356 (1455)
|+ .+++||.|.+ ..+-|+.||+-+.....+ - -=|++.++ ...+.++.+ +.++++ .+|||
T Consensus 332 r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~-~a~~li~~fdVr~~~~~~~a----~~LSG 406 (501)
T COG3845 332 RRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRK-FARELIEEFDVRAPSPDAPA----RSLSG 406 (501)
T ss_pred HhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHH-HHHHHHHHcCccCCCCCcch----hhcCC
Confidence 65 5999999995 556799999854322111 0 00112211 123445544 333332 47999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCC
Q 000511 1357 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1434 (1455)
Q Consensus 1357 GQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1434 (1455)
|+.|++-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|++|+-+|+.+.. ||||.||.+|+++...+
T Consensus 407 GNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~ 486 (501)
T COG3845 407 GNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVP 486 (501)
T ss_pred cceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceecccc
Confidence 99999999999999999999999999999999999999887764 69999999999999876 99999999999998887
Q ss_pred hhH
Q 000511 1435 PQT 1437 (1455)
Q Consensus 1435 p~e 1437 (1455)
|++
T Consensus 487 ~~~ 489 (501)
T COG3845 487 PEE 489 (501)
T ss_pred ccc
Confidence 776
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-49 Score=460.31 Aligned_cols=229 Identities=27% Similarity=0.390 Sum_probs=204.7
Q ss_pred CCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCC
Q 000511 1211 PDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNII 1285 (1455)
Q Consensus 1211 ~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~ 1285 (1455)
.+||..+.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.|||+|+.
T Consensus 73 ~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~ 152 (329)
T PRK14257 73 EDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTR 152 (329)
T ss_pred CCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcc
Confidence 4699999999999999997655679999999999999999999999999999999999997 57999999999997
Q ss_pred --CCChHHHhcccEEEeCCCCCCCCcHHHhcCcC---CCCChHHH-----HHHHHHhcHHHHHHhCCCchhhhcCCCCCC
Q 000511 1286 --NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF---HMNDDLKI-----WSVLEKCHVKEEVEAVGLETFVKESGISFS 1355 (1455)
Q Consensus 1286 --~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~---~~~~d~ei-----~~aL~~~~l~~~i~~lgLdt~v~e~G~~LS 1355 (1455)
.++...+|++++||||+|++|++|+++|++++ ...++++. .++++.+++++ ++++.+++.|.+||
T Consensus 153 ~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----~l~~~~~~~~~~LS 227 (329)
T PRK14257 153 SKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWD-----EVKDDLDKAGNALS 227 (329)
T ss_pred ccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcc-----hhhhhhhCCcccCC
Confidence 45667899999999999999999999999843 22444444 34455555433 45678899999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCC
Q 000511 1356 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1434 (1455)
Q Consensus 1356 gGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1434 (1455)
||||||+|||||++++|+|||||||||+||+++.+.+++.|++.++++|+|+|||+++++.+ ||||+||++|+|+|.|+
T Consensus 228 gGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~ 307 (329)
T PRK14257 228 GGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGE 307 (329)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998889999999999999998 99999999999999999
Q ss_pred hhHHhccCCc
Q 000511 1435 PQTLLQDECS 1444 (1455)
Q Consensus 1435 p~eLl~~~~s 1444 (1455)
|+++..++..
T Consensus 308 ~~~l~~~~~~ 317 (329)
T PRK14257 308 TKTIFIHPKN 317 (329)
T ss_pred HHHHhcCCCc
Confidence 9999987653
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-46 Score=388.48 Aligned_cols=220 Identities=28% Similarity=0.434 Sum_probs=189.4
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCC-CCChHHHhccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII-NTPVRDLRGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~-~i~~~~lR~~i 1296 (1455)
.|+++||+.+|... .||||||++|++||++.||||||||||||+++|.++-+|++|+|.|||.++. ..+...+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999754 6999999999999999999999999999999999999999999999998774 33789999999
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
|+|+|+.-||+- |+-||+.... ..+.+|-.+ + ..+.++..||......-...|||||+||+||||||.-+
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~---~--A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~ 154 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEARE---K--ALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMD 154 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHH---H--HHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCC
Confidence 999999999986 9999986432 122222111 1 11233334666666667778999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCc
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1444 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s 1444 (1455)
|+|+++|||||+||++.-..+.+++++.. .|.|.|+|||.+...++ +|||+.||+|+|+|.|+|+++..++.+
T Consensus 155 P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~ 229 (240)
T COG1126 155 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKS 229 (240)
T ss_pred CCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCC
Confidence 99999999999999999999999998875 58899999999999988 799999999999999999999998764
No 106
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-45 Score=401.29 Aligned_cols=220 Identities=29% Similarity=0.442 Sum_probs=190.7
Q ss_pred EEEEEEEEEecCC---CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCC---hHHH
Q 000511 1219 IEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDL 1292 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~---~~~l 1292 (1455)
|+++||++.|... ...+|+||||+|++||..||+|+||||||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999763 346999999999999999999999999999999999999999999999998887766 5566
Q ss_pred hcccEEEeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1293 RGRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1293 R~~i~~VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
|++||+|+|++-|++ -||.+|+.+-- ..+.+|+.+ ...+.++-.||....+.-..+||||||||++|||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~-----RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIARAL 156 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQ-----RVAELLELVGLSDKADRYPAQLSGGQKQRVAIARAL 156 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHH-----HHHHHHHHcCChhhhccCchhcCcchhhHHHHHHHH
Confidence 789999999999998 69999996421 133444332 122333333777777788889999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCC
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~ 1443 (1455)
..+|+||+.|||||+||++|.+.|.+.|++.- -|-|+++|||.++.+++ ||||.||++|+|+|.|+..++..+|.
T Consensus 157 a~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~Pk 234 (339)
T COG1135 157 ANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANPK 234 (339)
T ss_pred hcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCcc
Confidence 99999999999999999999999999987653 38899999999999987 99999999999999999999999885
No 107
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-45 Score=379.04 Aligned_cols=220 Identities=30% Similarity=0.430 Sum_probs=200.1
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCC-----ceEEECCEeCCC--CCh
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG-----GQILVDGLNIIN--TPV 1289 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~-----G~I~IdG~di~~--i~~ 1289 (1455)
..++++|+++.|.. ..+|+|||++|++++.+|++|||||||||++++|-|+.+..+ |+|.+||.||-+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 46899999999974 469999999999999999999999999999999999999876 999999999975 689
Q ss_pred HHHhcccEEEeCCCCCCCCcHHHhcCcCCC----C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp~lf~gTIreNLdp~~~----~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
-.+|+++|+|.|.|--|+.||+||+.++-. . -|+-+.++|+++.||+.++. .+.+.+..|||||+|||
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-----rL~~sa~~LSGGQQQRL 158 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-----RLHKSALGLSGGQQQRL 158 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-----HhhCCccCCChhHHHHH
Confidence 999999999999999999999999987522 1 24557889999999998864 45667778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
||||||.-+|+||+||||||+||+.+...|.+.|.+..++-||++|||.+.-... +|+...+-.|+++|+|+-+++..+
T Consensus 159 cIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~~ 238 (253)
T COG1117 159 CIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFTN 238 (253)
T ss_pred HHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhcC
Confidence 9999999999999999999999999999999999999899999999999997665 799999999999999999999988
Q ss_pred CC
Q 000511 1442 EC 1443 (1455)
Q Consensus 1442 ~~ 1443 (1455)
|.
T Consensus 239 P~ 240 (253)
T COG1117 239 PK 240 (253)
T ss_pred cc
Confidence 74
No 108
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=4.9e-44 Score=408.84 Aligned_cols=238 Identities=44% Similarity=0.744 Sum_probs=221.6
Q ss_pred CCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhc
Q 000511 1215 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRG 1294 (1455)
Q Consensus 1215 ~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~ 1294 (1455)
..|.|+++|++++|+....++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46789999999999754356999999999999999999999999999999999999999999999999999999989999
Q ss_pred ccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1295 RFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1295 ~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
+++|+||+|.+|++|+++|+++.....+++++++++.+++.+.++.+ |+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876544556788889999999998888 9999999999999999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHh
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1452 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~ 1452 (1455)
++|||||||++||+++.+.+.+.+++..+++|+|++||+++.+..||||++|++|++++.|+++++.+.+++.|+.++..
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 99999999999999999999999988767899999999999999999999999999999999999998877889988764
No 109
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=2.4e-44 Score=415.61 Aligned_cols=196 Identities=24% Similarity=0.326 Sum_probs=158.2
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|.|+||+|+|+++ +..+++++|.|.++++||+|||+|+|||||++++.+.+.|..|.|.-.-. -+++
T Consensus 389 vi~~~nv~F~y~~~-~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDN-PMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKLP 456 (614)
T ss_pred eEEEeccccCCCCc-chhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccch
Confidence 59999999999765 48999999999999999999999999999999999999999999854322 2233
Q ss_pred EEeCCC---CCCCCcHHHhcCcC-C-CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1298 VVPQSP---FLFEGSLRDNLDPF-H-MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1298 ~VpQdp---~lf~gTIreNLdp~-~-~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
+--|.- .-++-|.-+|+.|- . ....+++...|.++||.... .+.++ .+||+|||.|+++||.++++|
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~----q~~p~----~~LS~Gqr~rVlFa~l~~kqP 528 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDA----QVVPM----SQLSDGQRRRVLFARLAVKQP 528 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccc----cccch----hhcccccchhHHHHHHHhcCC
Confidence 334432 34566777776542 2 24556777788888775221 22233 379999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEe-CCh
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQ-GNP 1435 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~-G~p 1435 (1455)
.||+|||||++||.+|-....++|.++ ..+||+|+|+...|.. +++|++.+||++... |..
T Consensus 529 ~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i 591 (614)
T KOG0927|consen 529 HLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDI 591 (614)
T ss_pred cEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecCccH
Confidence 999999999999999999999999764 4589999999999987 799999999998764 443
No 110
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-44 Score=378.81 Aligned_cols=223 Identities=31% Similarity=0.462 Sum_probs=193.8
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+|+|||++|.+ ..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++..+||++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 799999999973 469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCC-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCch--hhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET--FVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt--~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
|-|.--||+- ||.||+..-. ..+.+++.+- .++.++..|||. ....-...|||||+||+.+||||..+|
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r-----~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP 154 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKR-----ADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADP 154 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCC
Confidence 9999999986 9999986322 2244444322 233444447875 345557789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHhccCCcHHHH
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQDECSVFSS 1448 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~ 1448 (1455)
+|++||||.++||+-|...+|+-+.+.- -++|+|+|||+++... -+|||.||++|+|+.+|+|++++++|...|-+
T Consensus 155 ~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~FV~ 233 (309)
T COG1125 155 PILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDFVE 233 (309)
T ss_pred CeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHHHH
Confidence 9999999999999999999999886643 3899999999999765 58999999999999999999999999866643
No 111
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.6e-43 Score=396.70 Aligned_cols=233 Identities=35% Similarity=0.569 Sum_probs=212.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997544579999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000511 1299 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1455)
Q Consensus 1299 VpQdp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~IL 1375 (1455)
+||++.+|+.|+++|+..... .+.+++.++++..++.+.++.+ |+++..+..+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 999999999999999986543 3455677778888888888888 8888888888999999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHh
Q 000511 1376 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1452 (1455)
Q Consensus 1376 lLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~ 1452 (1455)
||||||++||+.+.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|++++++++. +.|+.+++.
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~~~~~~~~~ 236 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAEN-GLYAYLYQL 236 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhcc-ChHHHHHhc
Confidence 9999999999999999999999887789999999999999889999999999999999999999864 578877653
No 112
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-43 Score=414.18 Aligned_cols=262 Identities=22% Similarity=0.300 Sum_probs=217.0
Q ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEE
Q 000511 524 HQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVI 603 (1455)
Q Consensus 524 ~~L~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 603 (1455)
+.++++.+|+++++++.+..|+..+|..... .+|+++|+..++.+...... . .+....++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~i~ 82 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE--D-----------FNHANVFE 82 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC--C-----------CCcCceEE
Confidence 4789999999999999999999887765433 56999998766532210000 0 12345799
Q ss_pred EEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEcC----------
Q 000511 604 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---------- 668 (1455)
Q Consensus 604 ~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~---------- 668 (1455)
++|+++.|... . +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 83 ~~nls~~y~~~-~---~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~ 158 (329)
T PRK14257 83 IRNFNFWYMNR-T---KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISS 158 (329)
T ss_pred EEeeEEEecCC-C---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 99999999642 1 235999999999999999999999999999999999996 5799987643
Q ss_pred -----cEEEEcCCCCCCCcCHHHHhccCCCC---C-HH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000511 669 -----SIAYVPQVPWILSGTIRDNILFGKNY---D-PQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1455)
Q Consensus 669 -----~i~y~~Q~p~l~~~ti~~nI~~g~~~---~-~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQk 735 (1455)
.++||||+||++++|++|||.|+..+ + ++ .|.++++.|+|..+++ +.++++|.+||||||
T Consensus 159 ~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~-------~~~~~~~~~LSgGqk 231 (329)
T PRK14257 159 LELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVK-------DDLDKAGNALSGGQQ 231 (329)
T ss_pred HhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhh-------hhhhCCcccCCHHHH
Confidence 59999999999999999999987432 2 22 2677888888866553 678999999999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHH
Q 000511 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 814 (1455)
Q Consensus 736 qRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~ 814 (1455)
|||+||||++++|+|+||||||+|||+++.+++.+. +.. +.+++|+|+|||+++++.. ||+|++|++|+|++.|+++
T Consensus 232 qRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~-i~~-l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~ 309 (329)
T PRK14257 232 QRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL-ILE-LKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETK 309 (329)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999886554 554 5567899999999999887 9999999999999999999
Q ss_pred HHHh
Q 000511 815 DLAV 818 (1455)
Q Consensus 815 ~l~~ 818 (1455)
++..
T Consensus 310 ~l~~ 313 (329)
T PRK14257 310 TIFI 313 (329)
T ss_pred HHhc
Confidence 9854
No 113
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-42 Score=389.32 Aligned_cols=219 Identities=53% Similarity=0.912 Sum_probs=205.7
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
|.++++|++++|+....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56899999999975445799999999999999999999999999999999999999999999999999988988999999
Q ss_pred EEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1297 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1297 ~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+|+||+|.+|++|++||++++....++++.++++..++.+.+..+ |+++.+++.+.+||+|||||++||||++++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999987666777889999999999998876 999999888999999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCCh
Q 000511 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p 1435 (1455)
+||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999987778999999999999999999999999999998864
No 114
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.8e-42 Score=396.48 Aligned_cols=192 Identities=21% Similarity=0.297 Sum_probs=161.4
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcc
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1295 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~ 1295 (1455)
...+++.+|+|.|.|+.++.+++++++++.-+++++||++|+||||+++++.+-.+|..|.+-+.+ |.+
T Consensus 360 ~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 346999999999999877899999999999999999999999999999999999999999988865 789
Q ss_pred cEEEeCCCCCC-CCcHH-----HhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCC-CCCChhHHHHHHHHHHH
Q 000511 1296 FAVVPQSPFLF-EGSLR-----DNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESG-ISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1296 i~~VpQdp~lf-~gTIr-----eNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G-~~LSgGQrQrl~LARAl 1368 (1455)
|+|-.|.-+=| +-.+- +-..|+ .+++|+.+.|... |++..+...+ ..||||||-|+++|-..
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG--~~~ee~r~hl~~~---------Gl~g~la~~si~~LSGGQKsrvafA~~~ 497 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPG--KTEEEIRRHLGSF---------GLSGELALQSIASLSGGQKSRVAFAACT 497 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCC--CCHHHHHHHHHhc---------CCCchhhhccccccCCcchhHHHHHHHh
Confidence 99999976522 21111 111222 2778887776654 5666655444 46999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEE
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVE 1431 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1431 (1455)
..+|.+|||||||+.||.++-..+-++|+. |.| -||+|+|+.+.+.. |+.++|.++|+|..
T Consensus 498 ~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~-F~G-GVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 498 WNNPHLLVLDEPTNHLDRDSLGALAKALKN-FNG-GVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred cCCCcEEEecCCCccccHHHHHHHHHHHHh-cCC-cEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 999999999999999999999999999976 444 79999999999987 99999999999975
No 115
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.1e-42 Score=379.21 Aligned_cols=207 Identities=46% Similarity=0.864 Sum_probs=187.6
Q ss_pred CCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH
Q 000511 1213 WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL 1292 (1455)
Q Consensus 1213 wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l 1292 (1455)
||..+.++++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543479999999999999999999999999999999999999999999999999998888889
Q ss_pred hcccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1293 RGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1293 R~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
|++++|+||+|.+|++|+++|+..+...+++++.++++ +++....||+||+||++||||++++|
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~----------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR----------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh----------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999998665444444433332 24556789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCCh
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p 1435 (1455)
+++||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+|
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999987778999999999999988999999999999998875
No 116
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-42 Score=400.44 Aligned_cols=223 Identities=24% Similarity=0.383 Sum_probs=190.7
Q ss_pred CCccEEEEEEEEEecCC---CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCC----
Q 000511 1215 FQGLIEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT---- 1287 (1455)
Q Consensus 1215 ~~g~I~f~nvs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i---- 1287 (1455)
....|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 34469999999999743 23699999999999999999999999999999999999999999999999998653
Q ss_pred ------------ChHHHhcccEEEeCCC--CCCCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCc-hhhhc
Q 000511 1288 ------------PVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKE 1349 (1455)
Q Consensus 1288 ------------~~~~lR~~i~~VpQdp--~lf~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e 1349 (1455)
+...+|++++||+|+| .+|++|++||+.++.. .++++. .+++ .+.++.+|++ ...+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~---~~~~--~~~l~~~gL~~~~~~~ 172 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEA---KKLA--KFYLNKMGLDDSYLER 172 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHH---HHHH--HHHHHHcCCChhHhcC
Confidence 3567899999999998 6899999999965421 223322 2222 3455666886 56788
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hhCEEEEEeCC
Q 000511 1350 SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHG 1427 (1455)
Q Consensus 1350 ~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G 1427 (1455)
.+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 888999999999999999999999999999999999999999999998753 5899999999999875 59999999999
Q ss_pred eEEEeCChhHHhccC
Q 000511 1428 HLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1428 ~ive~G~p~eLl~~~ 1442 (1455)
++++.|+|+++.+++
T Consensus 253 ~i~~~g~~~~~~~~~ 267 (320)
T PRK13631 253 KILKTGTPYEIFTDQ 267 (320)
T ss_pred EEEEeCCHHHHhcCH
Confidence 999999999887643
No 117
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7.7e-42 Score=401.35 Aligned_cols=223 Identities=25% Similarity=0.388 Sum_probs=188.3
Q ss_pred EEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHH---Hh
Q 000511 1219 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1293 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~---lR 1293 (1455)
|+++||+++|+.+ ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+..++..+ .|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cccEEEeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1294 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1294 ~~i~~VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
++|++|||++.+|+ .|++||+.+.. ..+.+++.+ ...+.++.+|++.........||||||||++|||||+
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~ 156 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR-----KVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALA 156 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHH
Confidence 89999999999996 69999996421 122222211 1123333345555555666789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHH
Q 000511 1370 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1446 (1455)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f 1446 (1455)
.+|+|||||||||+||+++.+.+.+.|++..+ +.|||+|||+++.+.. ||||++|++|+|+|.|++++++.++...+
T Consensus 157 ~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~~~ 236 (343)
T TIGR02314 157 SNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKTPL 236 (343)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCcHH
Confidence 99999999999999999999999999988753 7899999999999976 99999999999999999999987765434
No 118
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=384.84 Aligned_cols=229 Identities=34% Similarity=0.582 Sum_probs=208.2
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|+....++++|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999996543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000511 1299 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1455)
Q Consensus 1299 VpQdp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~IL 1375 (1455)
+||+|.+|+.|++||+..+.. ...+++.+.++..++.+.++.+ |+++.++....+||+|||||++||||++++|+++
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999986543 3445666777888888888888 8888888888899999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHH
Q 000511 1376 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSS 1448 (1455)
Q Consensus 1376 lLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~ 1448 (1455)
||||||++||..+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|+++++.++. +.|+.
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~~~~~ 232 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQG-GVYAK 232 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcC-cchhh
Confidence 9999999999999999999999887889999999999999999999999999999999999998764 45554
No 119
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.8e-42 Score=379.20 Aligned_cols=213 Identities=29% Similarity=0.449 Sum_probs=187.2
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.++++|++++|+ .+++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.+||.|+.+++..++-++++
T Consensus 2 ~L~~~~ls~~y~--~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYG--GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEEC--CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 478999999997 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCC-CCCcHHHhcCcCC--------CCC--hH-HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000511 1298 VVPQSPFL-FEGSLRDNLDPFH--------MND--DL-KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1455)
Q Consensus 1298 ~VpQdp~l-f~gTIreNLdp~~--------~~~--d~-ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1455)
||||++.. |.-||+|-+..+. ..+ |+ .+.++|+.+++.++.+ ..-..||||||||+.||
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~---------r~~~~LSGGerQrv~iA 150 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLAD---------RPVDELSGGERQRVLIA 150 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhc---------CcccccChhHHHHHHHH
Confidence 99999754 5559998875442 112 33 4667788887766543 22335999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhH-hhhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTV-LNMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1366 RAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti-~~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
|||.++|+||+||||||+||....-.+++.+++.. +++|||+|.|+++.. +.||++++|++|+++..|+|+|.+..
T Consensus 151 rALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~ 229 (258)
T COG1120 151 RALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTE 229 (258)
T ss_pred HHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCH
Confidence 99999999999999999999999999999998875 479999999999865 55899999999999999999999874
No 120
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-41 Score=380.83 Aligned_cols=225 Identities=40% Similarity=0.652 Sum_probs=207.0
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
|.|+++|++++|+. ..++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDE-KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCC-CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 46899999999963 23699999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEeCCCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1297 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1297 ~~VpQdp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
+|+||++.+|++|++||+..+.. ..++++.++++.+++.+.++.+ |+++.++.....||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999976543 3456777888889999888887 89999988888999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
+|||||||++||..+.+.+.+.|++..+++|||+|||+++.+..||+|++|++|++++.|+++++.++.
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~~ 228 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAKK 228 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhhC
Confidence 999999999999999999999998876789999999999999889999999999999999999887653
No 121
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.7e-42 Score=363.80 Aligned_cols=226 Identities=29% Similarity=0.458 Sum_probs=186.5
Q ss_pred cEEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCC-ChHHHhc
Q 000511 1218 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT-PVRDLRG 1294 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i-~~~~lR~ 1294 (1455)
.++++|+++.|+... .++|+||||+|.+||.+||+|+||||||||.++|.|+.+|++|+|.+||.+.... +.+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997542 2599999999999999999999999999999999999999999999999776543 3446788
Q ss_pred ccEEEeCCCC--CCC-CcHHHhc----CcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000511 1295 RFAVVPQSPF--LFE-GSLRDNL----DPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1366 (1455)
Q Consensus 1295 ~i~~VpQdp~--lf~-gTIreNL----dp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1366 (1455)
.+.+|+|||. |=+ -||++-| .+.+. ...++++++|+.+||.+. ........||||||||+||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~--------~l~R~P~eLSGGQ~QRiaIAR 154 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPS--------FLDRRPHELSGGQRQRIAIAR 154 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHH--------HHhcCchhcChhHHHHHHHHH
Confidence 8999999996 222 2666555 33221 123457777777766433 234556679999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCC
Q 000511 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1367 AlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~ 1443 (1455)
||.-+|++||+|||||+||.-..+.|.+.+.+..+ +-|.|+|||++..+.. ||||+||++|+++|.++-+++...+.
T Consensus 155 AL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~~~ 234 (252)
T COG1124 155 ALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSHPS 234 (252)
T ss_pred HhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcCCc
Confidence 99999999999999999999999999999987765 4599999999999987 99999999999999999999998755
Q ss_pred cHHHHHHH
Q 000511 1444 SVFSSFVR 1451 (1455)
Q Consensus 1444 s~f~~l~~ 1451 (1455)
..|.+.+.
T Consensus 235 h~ytr~Ll 242 (252)
T COG1124 235 HPYTRELL 242 (252)
T ss_pred cHHHHHHH
Confidence 56655443
No 122
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-41 Score=380.60 Aligned_cols=232 Identities=37% Similarity=0.639 Sum_probs=211.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|+.+ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999999643 469999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EeCCCCCCCCcHHHhcCcCC-CCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000511 1299 VPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1455)
Q Consensus 1299 VpQdp~lf~gTIreNLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~IL 1375 (1455)
+||+|.+|++|+++|+.... ..+++++.++++.+++.+.+..+ |+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999997643 23566778888888998888887 8999998888899999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHHh
Q 000511 1376 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1452 (1455)
Q Consensus 1376 lLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~~ 1452 (1455)
||||||++||+++.+.+.+.|++..++.|+|+++|+++.+..||++++|++|++++.|+++++.++ .+.|+.++.+
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~~ 235 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWKA 235 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHhc
Confidence 999999999999999999999887668899999999999999999999999999999999999875 4577776654
No 123
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.7e-41 Score=421.66 Aligned_cols=199 Identities=25% Similarity=0.341 Sum_probs=162.8
Q ss_pred CCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC--CCCceEEECCEeCCCCChHHHhcccEEEeCCCCCC-C
Q 000511 1231 SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--ICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF-E 1307 (1455)
Q Consensus 1231 ~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~--~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf-~ 1307 (1455)
+....|+|||=-++||-..|++|.||||||||++.|.+=.. ..+|+|+|||.+..+ +..++++|||.|++.-. .
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 44568999999999999999999999999999999997643 247999999998765 78899999999988644 4
Q ss_pred CcHHHhcCcC------CCCChHH----HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC-CEEE
Q 000511 1308 GSLRDNLDPF------HMNDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS-KVLC 1376 (1455)
Q Consensus 1308 gTIreNLdp~------~~~~d~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~-~ILl 1376 (1455)
-||||-|.+. .+.+++| +.++++-.+|.+.- |..||.-|..||..||.|+.||=-|..|| .||.
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-----daiVG~~G~GLs~eQRKrLTIgVELvA~P~~ilF 953 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-----DALVGLPGSGLSTEQRKRLTIGVELVANPSSILF 953 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-----hhhccCCCCCCCHHHhceeeEEEEEecCCceeEE
Confidence 5999998542 2233333 33444444444332 45677777889999999999999999999 8999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh--HhhhCEEEEEeC-CeEEEeCChhH
Q 000511 1377 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST--VLNMDEILILDH-GHLVEQGNPQT 1437 (1455)
Q Consensus 1377 LDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~t--i~~~DrI~vl~~-G~ive~G~p~e 1437 (1455)
||||||+||+++...|.+.+|+.. .|+||++.-|.++. .+.+||++.|++ |+.|-+|++.+
T Consensus 954 LDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 954 LDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred ecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 999999999999999999999875 69999999999885 356899999964 89998887643
No 124
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=372.37 Aligned_cols=210 Identities=29% Similarity=0.457 Sum_probs=184.7
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|... +||+||||+|++||.+||+||||||||||+++++|+++|.+|+|.++|.+++.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 58999999999754 59999999999999999999999999999999999999999999999998776543 57899
Q ss_pred EEeCCC---CCCCCcHHHhcCcCCC-----------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000511 1298 VVPQSP---FLFEGSLRDNLDPFHM-----------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1455)
Q Consensus 1298 ~VpQdp---~lf~gTIreNLdp~~~-----------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1455)
||||.. .-|+-||+|-+..+.. .+.+++.+||+++|++++. |-+++ .|||||+||+.
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-----~r~i~----~LSGGQ~QRV~ 149 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-----DRQIG----ELSGGQKQRVL 149 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-----CCccc----ccCcHHHHHHH
Confidence 999955 3588999999866421 1247889999999998764 33444 59999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1364 LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
|||||+++|++|+|||||+++|+.++..+.+.|++..+ ||||++|+|+++.+.. +|+|+.|. ++++..|+|++.+..
T Consensus 150 lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~~ 228 (254)
T COG1121 150 LARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLTE 228 (254)
T ss_pred HHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccCH
Confidence 99999999999999999999999999999999988764 9999999999999876 89999996 678899999999875
Q ss_pred C
Q 000511 1442 E 1442 (1455)
Q Consensus 1442 ~ 1442 (1455)
+
T Consensus 229 ~ 229 (254)
T COG1121 229 E 229 (254)
T ss_pred H
Confidence 4
No 125
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-41 Score=385.43 Aligned_cols=221 Identities=29% Similarity=0.458 Sum_probs=192.9
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++||+.+|++.. +|+|+||+|+.||.++++|||||||||++++|.|+.+|++|+|.|||.|+.++++++ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999997543 999999999999999999999999999999999999999999999999999999986 7899
Q ss_pred EEeCCCCCCCC-cHHHhcCcCCCC---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1298 VVPQSPFLFEG-SLRDNLDPFHMN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1298 ~VpQdp~lf~g-TIreNLdp~~~~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
+|+|+..||+. ||++|+.+.-.. ..+|+.+.. .+..+.++++..+......||||||||+||||||.++|+
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV-----~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~ 153 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRV-----KEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPK 153 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHH-----HHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCC
Confidence 99999999987 999999865322 334443322 223334477777778888999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHHH
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1447 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~ 1447 (1455)
+++||||.|+||++....+..-|++..+ +.|+|.|||+....+. +|||+||++|+|.+.|+|.|+.+++...|-
T Consensus 154 v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n~fV 230 (338)
T COG3839 154 VFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPANLFV 230 (338)
T ss_pred EEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccchhh
Confidence 9999999999999999998888877543 6899999999888775 899999999999999999999999887663
No 126
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=7e-41 Score=379.15 Aligned_cols=231 Identities=37% Similarity=0.611 Sum_probs=207.3
Q ss_pred EEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1219 IEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
++++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4789999999643 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEeCCCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1298 VVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1298 ~VpQdp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
|+||+|.+|+.|++||+..... ...+++.+.++..++.+.+..+ |+++.++....+||||||||++||||++++|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999976532 3455677778888888888877 888888888889999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHH
Q 000511 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1450 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~ 1450 (1455)
|||||||++||+.+.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|+++++.+.. +..+.++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQK-GVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcC-hhHHHHh
Confidence 99999999999999999999998876789999999999999899999999999999999999998754 4555554
No 127
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.6e-41 Score=355.80 Aligned_cols=229 Identities=28% Similarity=0.451 Sum_probs=196.8
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH---HH
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DL 1292 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~---~l 1292 (1455)
.-.|++++|+++|.. ..|++||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.|+.+++.+ .+
T Consensus 6 ~~~I~vr~v~~~fG~--~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 6 EPLIEVRGVTKSFGD--RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred cceEEEeeeeeecCC--EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 347999999999964 4699999999999999999999999999999999999999999999999999998864 56
Q ss_pred hcccEEEeCCCCCCCC-cHHHhcCc-CCCC---ChHHHHHHHHHhcHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHH
Q 000511 1293 RGRFAVVPQSPFLFEG-SLRDNLDP-FHMN---DDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLAR 1366 (1455)
Q Consensus 1293 R~~i~~VpQdp~lf~g-TIreNLdp-~~~~---~d~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQrl~LAR 1366 (1455)
|+++|++.|+.-||+. ||+||+.+ ..++ +++++.+ +-. ..++..||... ...-.+.||||.+.|.+|||
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~-lv~----~KL~~VGL~~~~~~~~PsELSGGM~KRvaLAR 158 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRE-LVL----MKLELVGLRGAAADLYPSELSGGMRKRVALAR 158 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHH-HHH----HHHHhcCCChhhhhhCchhhcchHHHHHHHHH
Confidence 8999999999999987 99999964 3333 3444433 111 12233377777 44557789999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCC
Q 000511 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1367 AlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~ 1443 (1455)
|+.-+|+|+++|||||+||+-+...+-+.|++..+ +.|+|+|||+++++.. ||||+++.+|+|+..|+|+|+.+.++
T Consensus 159 AialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~sd~ 238 (263)
T COG1127 159 AIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLASDD 238 (263)
T ss_pred HHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhCCC
Confidence 99999999999999999999999999888877543 8999999999999987 69999999999999999999999888
Q ss_pred cHHHHHHH
Q 000511 1444 SVFSSFVR 1451 (1455)
Q Consensus 1444 s~f~~l~~ 1451 (1455)
-..++.++
T Consensus 239 P~v~qf~~ 246 (263)
T COG1127 239 PWVRQFFN 246 (263)
T ss_pred HHHHHHhc
Confidence 77777664
No 128
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-41 Score=355.15 Aligned_cols=200 Identities=28% Similarity=0.365 Sum_probs=171.8
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.|+++|++-+|.. ..+|+|||++|++||.++|+|||||||||||++|.|+-++++|+|.++|
T Consensus 2 mi~i~~l~K~fg~------~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~ 75 (240)
T COG1126 2 MIEIKNLSKSFGD------KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKL 75 (240)
T ss_pred eEEEEeeeEEeCC------eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHH
Confidence 3678888887753 2359999999999999999999999999999999999999999999998
Q ss_pred --cEEEEcCCCCCCCc-CHHHHhccCC----CCC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 --SIAYVPQVPWILSG-TIRDNILFGK----NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 --~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
.+|+|+|+..||.- ||.|||..+. ..+ +++-.+.++..+|.+-.+..| ..||||||||
T Consensus 76 R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQR 144 (240)
T COG1126 76 RRKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQR 144 (240)
T ss_pred HHhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHH
Confidence 47899999999975 9999999863 122 234556677777776666555 4899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1455)
|||||||.-+|+++|+|||||||||+....+++- +......|.|.|+|||.+.+.+. ||||+.|++|+|+++|+++++
T Consensus 145 VAIARALaM~P~vmLFDEPTSALDPElv~EVL~v-m~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~ 223 (240)
T COG1126 145 VAIARALAMDPKVMLFDEPTSALDPELVGEVLDV-MKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEF 223 (240)
T ss_pred HHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHH-HHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHH
Confidence 9999999999999999999999999999888875 33324568899999999999987 999999999999999999988
Q ss_pred Hh
Q 000511 817 AV 818 (1455)
Q Consensus 817 ~~ 818 (1455)
-.
T Consensus 224 f~ 225 (240)
T COG1126 224 FD 225 (240)
T ss_pred hc
Confidence 54
No 129
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=377.93 Aligned_cols=226 Identities=31% Similarity=0.450 Sum_probs=192.6
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999963 36999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000511 1298 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLC 1376 (1455)
Q Consensus 1298 ~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARAlLr~~~ILl 1376 (1455)
|+||+|.+|+.|+++|+.......+.+ ...+.+.++.+|++ .........||||||||++||||++++|++||
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~lll 154 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEK------NVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLL 154 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcH------HHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999999999997542221111 01123344445665 34556677899999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHH
Q 000511 1377 LDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFVR 1451 (1455)
Q Consensus 1377 LDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~ 1451 (1455)
|||||++||.++.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++..++...+.+.+.
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~~~ 232 (241)
T PRK14250 155 LDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTKLFI 232 (241)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHHHHH
Confidence 999999999999999999998764 37899999999999875 8999999999999999999998766545655443
No 130
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-41 Score=371.31 Aligned_cols=215 Identities=31% Similarity=0.497 Sum_probs=192.4
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCC-CCChHHHhccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII-NTPVRDLRGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~-~i~~~~lR~~i 1296 (1455)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58999999999877 78999999999999999999999999999999999999999999999999998 48899999999
Q ss_pred EEEeCCC--CCCCCcHHHhcCcCCC---CChHH----HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000511 1297 AVVPQSP--FLFEGSLRDNLDPFHM---NDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1297 ~~VpQdp--~lf~gTIreNLdp~~~---~~d~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1455)
|+|.|+| .+|..||.+.+.++.. .+.+| +.++|+.++ +.........+||||||||+|||.+
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vg---------l~~~~~r~p~~LSGGqkqRvaIA~v 152 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVG---------LEELLDRPPFNLSGGQKQRVAIAGV 152 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcC---------chhhccCCccccCCcceeeHHhhHH
Confidence 9999999 7999999999987643 23434 344444444 4444556677899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1368 lLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
|..+|+|||||||||+||+...+.+.+.+++..+ ++|+|+|||+++.+.. |||++||++|+++.+|+|+++.++.
T Consensus 153 La~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 153 LAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 9999999999999999999999999999998754 4799999999999988 9999999999999999999998864
No 131
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.3e-40 Score=372.37 Aligned_cols=217 Identities=37% Similarity=0.540 Sum_probs=197.1
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
|.++++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999964334699999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEEeCCCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1297 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1297 ~~VpQdp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
+|+||+|.+|+.|++||+..... .+++++.+.++..++.+.++.. |+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998999999976432 3455677888999998888776 89998888888999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeC
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1433 (1455)
+|||||||++||.++.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988889999999999998765
No 132
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-40 Score=376.90 Aligned_cols=217 Identities=29% Similarity=0.450 Sum_probs=184.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh---HHHhcc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~---~~lR~~ 1295 (1455)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 578999999963 469999999999999999999999999999999999999999999999999987764 567889
Q ss_pred cEEEeCCCCCCCC-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1296 FAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1296 i~~VpQdp~lf~g-TIreNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
++|+||++.+|++ |++||+.... ..+.++..+. ..+.++.+|++.........||||||||++||||+++
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~ 153 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREI-----VLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALAL 153 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHH-----HHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 9999999999986 9999996531 1222222111 1233444466555555666899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.|+++++.+..
T Consensus 154 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 228 (235)
T cd03261 154 DPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRASD 228 (235)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCCC
Confidence 9999999999999999999999999988643 7899999999999876 8999999999999999999998643
No 133
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-40 Score=392.56 Aligned_cols=224 Identities=27% Similarity=0.428 Sum_probs=190.8
Q ss_pred EEEEEEEEEecC--CCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHH---Hh
Q 000511 1219 IEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1293 (1455)
Q Consensus 1219 I~f~nvs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~---lR 1293 (1455)
|+++|++++|+. ...++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2347999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cccEEEeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1294 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1294 ~~i~~VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
++++||||++.+|+ .|++||+.... ..++++..+ .+.+.++.+|++........+||||||||++|||||+
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~ 156 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALA 156 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHH
Confidence 89999999999886 69999996531 122222211 2234455557776666777789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHH
Q 000511 1370 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1446 (1455)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f 1446 (1455)
++|+||+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+++++..++...+
T Consensus 157 ~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~ 236 (343)
T PRK11153 157 SNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPKHPL 236 (343)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCcHH
Confidence 99999999999999999999999999988643 7899999999999876 99999999999999999999987654434
Q ss_pred H
Q 000511 1447 S 1447 (1455)
Q Consensus 1447 ~ 1447 (1455)
.
T Consensus 237 ~ 237 (343)
T PRK11153 237 T 237 (343)
T ss_pred H
Confidence 3
No 134
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.3e-40 Score=374.21 Aligned_cols=213 Identities=32% Similarity=0.464 Sum_probs=180.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCC-----CCCCceEEECCEeCCCCC--hHH
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT-----PICGGQILVDGLNIINTP--VRD 1291 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~-----~~~~G~I~IdG~di~~i~--~~~ 1291 (1455)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++.+.+ ...
T Consensus 1 i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGD--KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 578999999964 36999999999999999999999999999999999999 999999999999998776 567
Q ss_pred HhcccEEEeCCCCCCCCcHHHhcCcCCC----CChHHHHHHHHHhcHHHHHHhCCCchhhhcC--CCCCChhHHHHHHHH
Q 000511 1292 LRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKES--GISFSVGQRQLICLA 1365 (1455)
Q Consensus 1292 lR~~i~~VpQdp~lf~gTIreNLdp~~~----~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~--G~~LSgGQrQrl~LA 1365 (1455)
+|++++|+||++.+|+.|++||+.+... ..+++.. ..+.+.++.+|++...... +.+||||||||++||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la 153 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELD-----ERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLA 153 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHH-----HHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHH
Confidence 7889999999999998899999975321 1111111 1112333444555444444 468999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHH
Q 000511 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1366 RAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eL 1438 (1455)
||++++|++|||||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 154 RALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 9999999999999999999999999999999987655899999999998875 899999999999999998764
No 135
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-40 Score=374.23 Aligned_cols=219 Identities=26% Similarity=0.430 Sum_probs=187.6
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC---CCCceEEECCEeCCCCChHHHhc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLRG 1294 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~---~~~G~I~IdG~di~~i~~~~lR~ 1294 (1455)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.+.+...+|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 4789999999963 469999999999999999999999999999999999985 68999999999999888888899
Q ss_pred ccEEEeCCCCCCCCcHHHhcCcCCCC---------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000511 1295 RFAVVPQSPFLFEGSLRDNLDPFHMN---------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1455)
Q Consensus 1295 ~i~~VpQdp~lf~gTIreNLdp~~~~---------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1455)
+++|+||+|.+|+.|++||+.++... .++++.++++.+++.+.+ +....+.+.+||+|||||++||
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv~la 154 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-----KDKLKQNALALSGGQQQRLCIA 154 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-----hHHhcCCcccCCHHHHHHHHHH
Confidence 99999999999999999999754211 111233444444432221 1234566778999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCC
Q 000511 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1366 RAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~ 1443 (1455)
||++++|+++||||||++||.++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 155 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 233 (246)
T PRK14269 155 RALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENPK 233 (246)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCCC
Confidence 9999999999999999999999999999999887678999999999998865 89999999999999999999987553
No 136
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-40 Score=380.80 Aligned_cols=220 Identities=28% Similarity=0.440 Sum_probs=187.7
Q ss_pred cEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1218 LIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
.++++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999643 24699999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEeCCCC--CCCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1297 AVVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1297 ~~VpQdp~--lf~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
+|+||+|. ++..|+++|+.+... .+.++..+ ...+.++.+|++........+||||||||++||||++++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~ 158 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKE-----RVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMR 158 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 99999983 567799999975421 22222111 112333344565556666678999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||||++|++|++++.|+++++.+++
T Consensus 159 p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13650 159 PKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSRG 231 (279)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcCh
Confidence 999999999999999999999999987643 79999999999999889999999999999999999987653
No 137
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.5e-40 Score=357.86 Aligned_cols=208 Identities=30% Similarity=0.421 Sum_probs=173.1
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh---HHHh
Q 000511 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLR 1293 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~---~~lR 1293 (1455)
++++||+..|..+. ..+|+++||+|++||.|+|+||||||||||+++|-++..|++|.|.++|.|+..++. ..+|
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67899999996443 368999999999999999999999999999999999999999999999999999984 3444
Q ss_pred -cccEEEeCCCCCCCC-cHHHhcCc---CCCCChHHHHHHHHHhcHHHHHHhCCCchhhh-cCCCCCChhHHHHHHHHHH
Q 000511 1294 -GRFAVVPQSPFLFEG-SLRDNLDP---FHMNDDLKIWSVLEKCHVKEEVEAVGLETFVK-ESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1294 -~~i~~VpQdp~lf~g-TIreNLdp---~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~-e~G~~LSgGQrQrl~LARA 1367 (1455)
++||+|+|+..|++. |++||+.. .......+..++ ..+..+.+||..... .....||||||||+|||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~-----~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARA 156 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRA-----AEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARA 156 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHH-----HHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHH
Confidence 579999999999876 99999863 221121111111 122233336664444 5567899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhhCEEEEEeCCeEEE
Q 000511 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVE 1431 (1455)
Q Consensus 1368 lLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive 1431 (1455)
|+.+|+|++.||||++||.+|.+.|.+.+++.. .++|+|+|||+.+....|||++.|.+|++.+
T Consensus 157 L~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 157 LINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999998874 3789999999999999999999999999543
No 138
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-40 Score=350.47 Aligned_cols=221 Identities=28% Similarity=0.412 Sum_probs=189.6
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCC---hHHHhc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDLRG 1294 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~---~~~lR~ 1294 (1455)
.|+++||+.+|+ +...+|+||||+|++||.|||+|+||||||||+++|.|+.+|++|+|.++|.++...+ ++.+|+
T Consensus 3 ~i~~~nl~k~yp-~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYP-GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecC-CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 589999999997 4567999999999999999999999999999999999999999999999999998887 667788
Q ss_pred ccEEEeCCCCCCCC-cHHHhcCcC------------CCCChH---HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhH
Q 000511 1295 RFAVVPQSPFLFEG-SLRDNLDPF------------HMNDDL---KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1358 (1455)
Q Consensus 1295 ~i~~VpQdp~lf~g-TIreNLdp~------------~~~~d~---ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQ 1358 (1455)
++|+|+|++-|-+- |+.+|+..+ +-++.+ +..++|+++|+.+. .-....+|||||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~---------A~qra~~LSGGQ 152 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK---------AYQRASTLSGGQ 152 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH---------HHHHhccCCcch
Confidence 99999999998865 999997432 233333 34556666666543 233455799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCCh
Q 000511 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1359 rQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p 1435 (1455)
+||++|||||.++|+|++=|||+|+||+.+.+.|++.|++.. .|.|||+.-|.++..++ ||||+-|++|+|+-.|++
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 999999999999999999999999999999999999998764 58999999999999886 799999999999999999
Q ss_pred hHHhccCCcHHHHHHH
Q 000511 1436 QTLLQDECSVFSSFVR 1451 (1455)
Q Consensus 1436 ~eLl~~~~s~f~~l~~ 1451 (1455)
+||-+ ..+...|.
T Consensus 233 ~el~~---~~~~~iYg 245 (258)
T COG3638 233 SELTD---EALDEIYG 245 (258)
T ss_pred hhhhH---HHHHHHhc
Confidence 99643 24555543
No 139
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=382.26 Aligned_cols=218 Identities=30% Similarity=0.509 Sum_probs=184.9
Q ss_pred EEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCC--hHHHh
Q 000511 1219 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--VRDLR 1293 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~--~~~lR 1293 (1455)
|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997432 36999999999999999999999999999999999999999999999999998754 45788
Q ss_pred cccEEEeCCC--CCCCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCc--hhhhcCCCCCChhHHHHHHHHH
Q 000511 1294 GRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE--TFVKESGISFSVGQRQLICLAR 1366 (1455)
Q Consensus 1294 ~~i~~VpQdp--~lf~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLd--t~v~e~G~~LSgGQrQrl~LAR 1366 (1455)
++++||||+| .+|+.|+++|+.+... .++++..+. ..+.++.+|++ ...+.....||||||||++|||
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAr 157 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAG 157 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHH
Confidence 9999999998 5788999999975321 233322211 12233344665 4456667789999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1367 AlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
||+.+|++|||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+. .||||++|++|++++.|++++++++
T Consensus 158 aL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 158 VVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 99999999999999999999999999999987643 789999999999986 4999999999999999999998763
No 140
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-40 Score=388.51 Aligned_cols=222 Identities=29% Similarity=0.434 Sum_probs=189.1
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
..|+++|++++|.. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.+.+ |+++
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 46999999999963 4699999999999999999999999999999999999999999999999999887754 6789
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
++|+|++.+|+. |++||+.+.-. .+++++.+. +.+.++.+|++.........||||||||++|||||+++|
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~-----v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P 155 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQR-----VKEALELVDLAGFEDRYVDQISGGQQQRVALARALILKP 155 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHH-----HHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999999999976 99999975421 222222211 122333335555555666789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHHH
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1447 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~ 1447 (1455)
+||+||||||+||..+.+.+++.|++..+ +.|+|+|||+++.+.. ||||+||++|+|++.|+|+++.+++...|.
T Consensus 156 ~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~~~~ 233 (351)
T PRK11432 156 KVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPASRFM 233 (351)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCchHH
Confidence 99999999999999999999999987654 7899999999999865 899999999999999999999998876553
No 141
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.1e-40 Score=374.77 Aligned_cols=222 Identities=26% Similarity=0.442 Sum_probs=187.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1297 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l-R~~i~ 1297 (1455)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999963 469999999999999999999999999999999999999999999999999988876654 57799
Q ss_pred EEeCCCCCCCC-cHHHhcCcCCCC-ChHHH-------HHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1298 VVPQSPFLFEG-SLRDNLDPFHMN-DDLKI-------WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1298 ~VpQdp~lf~g-TIreNLdp~~~~-~d~ei-------~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
|+||++.+|++ |++||+...... ....+ ...-......+.++.+|++...+.....||||||||++||||+
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 158 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIARAL 158 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHHHH
Confidence 99999999987 999998643211 00000 0000111234556666887777777788999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
+++|++|||||||++||..+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++
T Consensus 159 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 234 (236)
T cd03219 159 ATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNNP 234 (236)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccCC
Confidence 99999999999999999999999999998764 68899999999999876 8999999999999999999997643
No 142
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-40 Score=390.23 Aligned_cols=222 Identities=23% Similarity=0.352 Sum_probs=188.8
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|+.+ .++|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ +++++
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 48999999999422 4699999999999999999999999999999999999999999999999999988765 47899
Q ss_pred EEeCCCCCCCC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1298 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1298 ~VpQdp~lf~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
||||++.+|+. |++||+.+... .+..+..+ ...+.++.+|++...+....+||||||||++|||||+++|+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~ 154 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEE-----RVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPA 154 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999975 99999975422 22222211 12233444466655666667899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHHH
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1447 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~ 1447 (1455)
+|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++...|.
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~~~~ 231 (356)
T PRK11650 155 VFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPASTFV 231 (356)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCccHHH
Confidence 9999999999999999999999987653 7899999999998765 899999999999999999999988765554
No 143
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.3e-40 Score=370.45 Aligned_cols=214 Identities=27% Similarity=0.394 Sum_probs=181.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++||+++|+.+..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5789999999653356999999999999999999999999999999999999999999999999987643 667889999
Q ss_pred EeCCCCCC-CCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf-~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||+|.+| ..|+++|+.... ....++..+ ...+.++.+|++........+||+|||||++||||++++|++
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKE-----EVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSV 154 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999998 579999986431 112111111 123344444665555555668999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHH
Q 000511 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eL 1438 (1455)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 155 LLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999987777999999999999876 899999999999999999875
No 144
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=5.4e-40 Score=388.75 Aligned_cols=221 Identities=28% Similarity=0.421 Sum_probs=192.0
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|+. ..+|+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ |++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999964 4699999999999999999999999999999999999999999999999999887764 67899
Q ss_pred EEeCCCCCCC-CcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1298 VVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1298 ~VpQdp~lf~-gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
||||++.+|+ .|++||+.+... .+..+.. ....+.++.+||+........+||||||||++|||||+++|+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~ 154 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVA-----ERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPG 154 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999997 599999975421 1222221 123445555677777777888999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHHH
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1447 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~ 1447 (1455)
+|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++...|-
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~~ 231 (353)
T TIGR03265 155 LLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPFV 231 (353)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHHH
Confidence 9999999999999999999999987643 7899999999998765 899999999999999999999998876663
No 145
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-40 Score=375.93 Aligned_cols=221 Identities=28% Similarity=0.405 Sum_probs=188.1
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCC--CC
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TP 1288 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~ 1288 (1455)
++.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 567999999999964 369999999999999999999999999999999999986 589999999999863 45
Q ss_pred hHHHhcccEEEeCCCCCCCCcHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000511 1289 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1455)
Q Consensus 1289 ~~~lR~~i~~VpQdp~lf~gTIreNLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1455)
...+|++++|+||+|.+|+.|+++|+.... ..+. ++++++++.+++.+. +....++...+|||||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~q 163 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNE-----VKDKLHQSGYSLSGGQQQ 163 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChh-----hHHHHhcCCCCCCHHHHH
Confidence 667899999999999999999999997531 1222 234444444443221 124456667789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1361 rl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
|++||||++++|+||||||||++||.++.+.+.+.|++..++.|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 164 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 164 RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred HHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 8999999999999999999998
Q ss_pred ccCC
Q 000511 1440 QDEC 1443 (1455)
Q Consensus 1440 ~~~~ 1443 (1455)
+.+.
T Consensus 244 ~~~~ 247 (260)
T PRK10744 244 TKPA 247 (260)
T ss_pred hCCC
Confidence 7543
No 146
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-40 Score=373.33 Aligned_cols=226 Identities=30% Similarity=0.459 Sum_probs=190.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 469999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EeCCCCCCC-CcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCch--hhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1299 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLET--FVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1299 VpQdp~lf~-gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt--~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
+||+|.+|+ .|++||+..... .+.++. .....+.++.+|++. .....+.+||||||||++||||++++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p 154 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADP 154 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999986 599999964321 111111 112344555567764 556677889999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHH-HH
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF-SS 1448 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f-~~ 1448 (1455)
++|+|||||++||.++.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++.+++...+ +.
T Consensus 155 ~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 234 (242)
T cd03295 155 PLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPANDFVAE 234 (242)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCCChHHHH
Confidence 9999999999999999999999998864 37999999999998765 89999999999999999999976544333 44
Q ss_pred HH
Q 000511 1449 FV 1450 (1455)
Q Consensus 1449 l~ 1450 (1455)
+.
T Consensus 235 ~~ 236 (242)
T cd03295 235 FV 236 (242)
T ss_pred Hh
Confidence 43
No 147
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-40 Score=380.99 Aligned_cols=219 Identities=27% Similarity=0.428 Sum_probs=187.2
Q ss_pred cEEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCC----ChH
Q 000511 1218 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i----~~~ 1290 (1455)
.|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 379999999996432 3699999999999999999999999999999999999999999999999999754 346
Q ss_pred HHhcccEEEeCCC--CCCCCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHH
Q 000511 1291 DLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICL 1364 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp--~lf~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~L 1364 (1455)
.+|++++||||+| .+|+.|+++|+.+.. ..+.++..+. ..+.++.+||++ ..+..+.+||||||||++|
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~l 156 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAI 156 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHcCCChhhhhCCcccCCHHHHHHHHH
Confidence 7899999999998 588899999996532 1222222221 234455568874 4566788999999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1365 ARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+. .||||++|++|++++.|+++++.++
T Consensus 157 araL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 236 (286)
T PRK13646 157 VSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFKD 236 (286)
T ss_pred HHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999998764 4799999999999986 4899999999999999999998774
No 148
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-40 Score=370.82 Aligned_cols=216 Identities=28% Similarity=0.393 Sum_probs=183.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999876653 3678999
Q ss_pred EeCCCCCCC-CcHHHhcCcCCCC-------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1299 VPQSPFLFE-GSLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1299 VpQdp~lf~-gTIreNLdp~~~~-------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
+||+|.+|+ .|++||+.+.... +..+.. ..+.+.++.+|++........+||+|||||++|||||++
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~ 153 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAV 153 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 999999986 5999999753211 111111 112344455577666666677899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCC
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~ 1443 (1455)
+|++|||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 154 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 229 (239)
T cd03296 154 EPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDHPA 229 (239)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcCCC
Confidence 9999999999999999999999999987643 7899999999998765 89999999999999999999986543
No 149
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=6.7e-40 Score=373.03 Aligned_cols=221 Identities=29% Similarity=0.437 Sum_probs=186.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCC-----CceEEECCEeCCCC--ChHH
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIINT--PVRD 1291 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~-----~G~I~IdG~di~~i--~~~~ 1291 (1455)
++++||+++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGE--KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECC--eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 789999999964 35999999999999999999999999999999999999998 99999999999763 4567
Q ss_pred HhcccEEEeCCCCCCCCcHHHhcCcCC---C-CChHHHHHHHHHhcHHHHHHhCCCc----hhhhcCCCCCChhHHHHHH
Q 000511 1292 LRGRFAVVPQSPFLFEGSLRDNLDPFH---M-NDDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQLIC 1363 (1455)
Q Consensus 1292 lR~~i~~VpQdp~lf~gTIreNLdp~~---~-~~d~ei~~aL~~~~l~~~i~~lgLd----t~v~e~G~~LSgGQrQrl~ 1363 (1455)
.|++++|+||++.+|+.|++||+.... . .+.++..+ ...+.++.+|++ ...+....+||||||||++
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~ 154 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDE-----IVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLC 154 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHH
Confidence 788999999999999999999996421 1 11111111 122333444554 4456667789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1364 LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
||||++++|+++||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++
T Consensus 155 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 234 (247)
T TIGR00972 155 IARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFTNP 234 (247)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCC
Confidence 999999999999999999999999999999999987667899999999998865 8999999999999999999998765
Q ss_pred CcHH
Q 000511 1443 CSVF 1446 (1455)
Q Consensus 1443 ~s~f 1446 (1455)
...+
T Consensus 235 ~~~~ 238 (247)
T TIGR00972 235 KEKR 238 (247)
T ss_pred CChH
Confidence 4444
No 150
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.2e-40 Score=368.94 Aligned_cols=215 Identities=26% Similarity=0.423 Sum_probs=182.2
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1297 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l-R~~i~ 1297 (1455)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999964 369999999999999999999999999999999999999999999999999988876654 67899
Q ss_pred EEeCCCCCCCC-cHHHhcCcCCCCC-hHHHHHHHHHhcHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1298 VVPQSPFLFEG-SLRDNLDPFHMND-DLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1298 ~VpQdp~lf~g-TIreNLdp~~~~~-d~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
|+||++.+|++ |+++|+.+..... +.+..+ .+.+.++.+ +++...+.....||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~-----~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 153 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKA-----RLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKL 153 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHH-----HHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999987 9999996542211 111111 112233333 455555666678999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 154 LLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 99999999999999999999998764 57899999999998866 89999999999999999988764
No 151
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-40 Score=374.75 Aligned_cols=223 Identities=26% Similarity=0.390 Sum_probs=188.1
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCC--CCh
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1289 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i~~ 1289 (1455)
..++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 6 AIIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred ceEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 36999999999964 4699999999999999999999999999999999999997 48999999999863 345
Q ss_pred HHHhcccEEEeCCCCCCCCcHHHhcCcCCC----CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000511 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp~lf~gTIreNLdp~~~----~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1455)
..+|++++|+||++.+|+.|++||+.+... .+ ++++.++++.+++.+.+ +........+||||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgG~~qr 158 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV-----KDKLNTNALSLSGGQQQR 158 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh-----HHHHhCCcccCCHHHHHH
Confidence 677899999999999999999999965321 11 23344555555543222 223344567899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1362 l~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
++||||++++|++|||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 238 (254)
T PRK14273 159 LCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFF 238 (254)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999988668999999999999865 89999999999999999999987
Q ss_pred cCCcHH
Q 000511 1441 DECSVF 1446 (1455)
Q Consensus 1441 ~~~s~f 1446 (1455)
++.-.|
T Consensus 239 ~~~~~~ 244 (254)
T PRK14273 239 NPKNTK 244 (254)
T ss_pred CCCChH
Confidence 655443
No 152
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-40 Score=379.04 Aligned_cols=218 Identities=29% Similarity=0.454 Sum_probs=184.6
Q ss_pred EEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCC----CChHH
Q 000511 1219 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----TPVRD 1291 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~----i~~~~ 1291 (1455)
|+++||+++|+++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997432 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcccEEEeCCC--CCCCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000511 1292 LRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1365 (1455)
Q Consensus 1292 lR~~i~~VpQdp--~lf~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LA 1365 (1455)
+|++++||+|+| .+|+.|+.+|+.+... .+.+++.+ ...+.++.+|++ ........+||||||||++||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA 156 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIA 156 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCCChhhccCCcccCCHHHHHHHHHH
Confidence 899999999998 7899999999975321 22222211 122334444664 344666778999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1366 RAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
|||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||++|++|++++.|+|+++..+
T Consensus 157 ~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 157 GILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99999999999999999999999999999998754 4889999999999885 4999999999999999999999764
No 153
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-40 Score=371.10 Aligned_cols=219 Identities=28% Similarity=0.434 Sum_probs=185.3
Q ss_pred EEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH---HHh
Q 000511 1219 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1293 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~---~lR 1293 (1455)
|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999643 12699999999999999999999999999999999999999999999999999877654 347
Q ss_pred cccEEEeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1294 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1294 ~~i~~VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
++++|+||+|.+|+ .|++||+.... ..+..+. .....+.++.+|++........+||+|||||++||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~ 156 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEI-----EERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALA 156 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHh
Confidence 89999999999997 59999996421 1111111 112234455557766666667789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1370 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
++|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||++++|++|++++.|+++++.+++
T Consensus 157 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 232 (233)
T cd03258 157 NNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFANP 232 (233)
T ss_pred cCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCC
Confidence 9999999999999999999999999998764 27899999999999876 8999999999999999999987643
No 154
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=7.4e-40 Score=367.77 Aligned_cols=215 Identities=35% Similarity=0.525 Sum_probs=194.2
Q ss_pred CCccEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHh
Q 000511 1215 FQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLR 1293 (1455)
Q Consensus 1215 ~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR 1293 (1455)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 35789999999999643 24699999999999999999999999999999999999999999999999999888888888
Q ss_pred cccEEEeCCCCCCCCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1294 GRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1294 ~~i~~VpQdp~lf~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
++++|+||+|.+|++|+++|+++... ....++++..++.++.+.++.+ |+++.+++...+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999986432 2334555666667788888888 89988898889999999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeE
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHL 1429 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~i 1429 (1455)
+|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987777999999999999988999999999975
No 155
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-40 Score=372.32 Aligned_cols=215 Identities=29% Similarity=0.420 Sum_probs=183.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCC---hHHHhcc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDLRGR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~---~~~lR~~ 1295 (1455)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 46999999999999999999999999999999999999999999999999998876 4567889
Q ss_pred cEEEeCCCCCCC-CcHHHhcCcCCC------------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1296 FAVVPQSPFLFE-GSLRDNLDPFHM------------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1296 i~~VpQdp~lf~-gTIreNLdp~~~------------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
++|+||++.+|+ .|+++|+.+... .+++. .....+.++.+|++...+..+..||||||||+
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv 153 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEE------KQRALAALERVGLLDKAYQRADQLSGGQQQRV 153 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHH------HHHHHHHHHHcCChhhhCCCcccCCHHHHHHH
Confidence 999999998887 699999964211 11110 11123344455676666677788999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHh
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
+||||++++|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 154 AIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999999998864 3799999999999998 48999999999999999999974
Q ss_pred c
Q 000511 1440 Q 1440 (1455)
Q Consensus 1440 ~ 1440 (1455)
+
T Consensus 234 ~ 234 (241)
T cd03256 234 D 234 (241)
T ss_pred H
Confidence 3
No 156
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=6.3e-40 Score=387.04 Aligned_cols=209 Identities=26% Similarity=0.386 Sum_probs=180.0
Q ss_pred CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH----hcccEEEeCCCCCCCC
Q 000511 1233 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGRFAVVPQSPFLFEG 1308 (1455)
Q Consensus 1233 ~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l----R~~i~~VpQdp~lf~g 1308 (1455)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.|+...+...+ |++++||||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 469999999999999999999999999999999999999999999999999999998887 7899999999999985
Q ss_pred -cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCC
Q 000511 1309 -SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANV 1384 (1455)
Q Consensus 1309 -TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~l 1384 (1455)
||+||+.+... .+.++..+ ...+.++.+||+...+....+||||||||++|||||+++|+|||||||||+|
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saL 160 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSAL 160 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99999965321 12222211 1223344447776677778899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHH
Q 000511 1385 DAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1446 (1455)
Q Consensus 1385 D~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f 1446 (1455)
|+.+.+.+++.+++.. .++|+|+|||+++.+.. ||||++|++|++++.|+|+++++++...|
T Consensus 161 D~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 161 DPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 9999999999998763 37999999999998655 89999999999999999999998765444
No 157
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=375.61 Aligned_cols=220 Identities=25% Similarity=0.468 Sum_probs=189.9
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 58999999999644457999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEeCCC--CCCCCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1298 VVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1298 ~VpQdp--~lf~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
|+||+| .++..|++||+.+.. ..++++..+ .+.+.++.+|++........+||||||||++|||||+++|
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNP 161 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 455679999997531 122222221 1233444557766677777899999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
++|||||||++||..+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+++
T Consensus 162 ~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 233 (271)
T PRK13632 162 EIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNNK 233 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcCH
Confidence 99999999999999999999999988643 48999999999998889999999999999999999987653
No 158
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-40 Score=373.81 Aligned_cols=219 Identities=28% Similarity=0.422 Sum_probs=185.6
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCC--CChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~~~ 1290 (1455)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 369999999999999999999999999999999999975 589999999999875 3456
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCC----CCC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~----~~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
.+|++++|+||++.+|++|++||+.+.. ... ++++.++++.+++.+.+ +...+....+||||||||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq~qrv 158 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-----KDRLHESALGLSGGQQQRL 158 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-----hHHhhCCcccCCHHHHHHH
Confidence 7789999999999999999999996431 111 22344445554443221 2234566678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++++|+||||||||++||..+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 238 (253)
T PRK14242 159 CIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIFTR 238 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 9999999999999999999999999999999999987667899999999999865 899999999999999999999876
Q ss_pred CC
Q 000511 1442 EC 1443 (1455)
Q Consensus 1442 ~~ 1443 (1455)
+.
T Consensus 239 ~~ 240 (253)
T PRK14242 239 PR 240 (253)
T ss_pred CC
Confidence 54
No 159
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=374.86 Aligned_cols=223 Identities=25% Similarity=0.390 Sum_probs=188.8
Q ss_pred CCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCC--
Q 000511 1214 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN-- 1286 (1455)
Q Consensus 1214 p~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~-- 1286 (1455)
|....|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++..
T Consensus 9 ~~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 9 SKNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CCCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 33457999999999964 369999999999999999999999999999999999987 689999999999863
Q ss_pred CChHHHhcccEEEeCCCCCCCCcHHHhcCcCCC---CC---hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000511 1287 TPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1455)
Q Consensus 1287 i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~---~~---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1455)
.+...+|++++|+||+|.+|+.|++||+.+... .. ++++.++++.++++. +++.........||+||||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-----ECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-----hhhhhhCCCcccCCHHHHH
Confidence 566788899999999999999999999975422 11 233445555554432 2233455556789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeC-----------Ce
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-----------GH 1428 (1455)
Q Consensus 1361 rl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~-----------G~ 1428 (1455)
|++||||++++|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.+ ||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999987667899999999998865 899999996 67
Q ss_pred EEEeCChhHHhccCC
Q 000511 1429 LVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1429 ive~G~p~eLl~~~~ 1443 (1455)
++|.|+++++.+++.
T Consensus 242 ~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 242 LVEFNETKKIFNSPK 256 (269)
T ss_pred EEEeCCHHHHHhCcC
Confidence 999999999987553
No 160
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1e-39 Score=368.95 Aligned_cols=215 Identities=27% Similarity=0.432 Sum_probs=185.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.+. +++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 689999999963 46999999999999999999999999999999999999999999999999998776544 458999
Q ss_pred EeCCCCC-CCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFL-FEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~l-f~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||++.+ +..|+++|+..... .+..+.. ....+.++.+|++...+....+||||||||++||||++++|+|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~l 153 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPAL 153 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999987 46799999965321 1111111 1234455556787777777789999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 154 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 154 LLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred EEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999998865 37899999999999988999999999999999999999875
No 161
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-37 Score=341.88 Aligned_cols=469 Identities=19% Similarity=0.252 Sum_probs=324.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhhHHHHHHhhhhhhhcchhHHHHHHHHHH
Q 000511 941 LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANF 1020 (1455)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~ 1020 (1455)
|.++..+..+...+........+.+...+++.++.++++.+|+.-+++...++++.++++|+..|.-. ...+..+.+..
T Consensus 54 f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~-~s~lp~~~qa~ 132 (546)
T COG4615 54 FLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFA-FSRLPELVQAI 132 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeeh-HhhhHHHHHHH
Confidence 33333333444445556667788999999999999999999999999999999999999999999732 23344466677
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHH--HH
Q 000511 1021 VGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYF--MA 1098 (1455)
Q Consensus 1021 ~~~l~~~~~~~~~~~~~~l~~~p~~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~--~~ 1098 (1455)
+..+++.+.+++.+|.+.++.+..+++..+.+.+.++..-+--+...++...++.+++..++|.+..+..+-..+. .+
T Consensus 133 il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~ 212 (546)
T COG4615 133 ILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNN 212 (546)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhh
Confidence 7778888888998887666554444443333222211111111222233456788999999999998876543332 22
Q ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 000511 1099 KFKEHVVLYQR----TSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGN 1174 (1455)
Q Consensus 1099 ~~~~~~~~~~~----~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~ 1174 (1455)
.+...-....+ ..........|.++.+-. ++..+..++.. . .. .+.........-.+.+-+++.+
T Consensus 213 ~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~----lIGlvf~lal~--~-~w----~st~~a~tivlvlLflr~pL~s 281 (546)
T COG4615 213 LYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLG----LIGLVFWLALS--L-GW----ASTNVAATIVLVLLFLRTPLLS 281 (546)
T ss_pred hcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHH----HHHHHHHHHHh--h-cc----chhhHHHHHHHHHHHHhhHHHH
Confidence 22211111111 111111233443332111 11111111110 0 00 0111111111222334567888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECC
Q 000511 1175 FLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGR 1254 (1455)
Q Consensus 1175 l~~~~~~~e~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGr 1254 (1455)
++..+..+-++.+|..|+.++...|+.+.-....+.|+| ..|+++||.|.|.+.. --+..||++|+.||.|-|+|.
T Consensus 282 ~vgilP~l~~AqvA~~kiakle~~~~~a~~~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelvFliG~ 357 (546)
T COG4615 282 AVGILPTLLTAQVAFNKIAKLELAPYKADFPRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELVFLIGG 357 (546)
T ss_pred HHhhhhHHHHHHHHHHHHHHhhcCCccccCCCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEEEEECC
Confidence 899999999999999999998764433222222333445 4699999999997653 457889999999999999999
Q ss_pred CCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcH
Q 000511 1255 TGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHV 1334 (1455)
Q Consensus 1255 tGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l 1334 (1455)
+||||||++++|.|+|.|++|+|++||.+++.-+++++|+-++.|.-|-+||+.++ -+.+..+.+.+..-|++..+
T Consensus 358 NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~LqrLel 433 (546)
T COG4615 358 NGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWLQRLEL 433 (546)
T ss_pred CCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998764 23344566667666766655
Q ss_pred HHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHh--cCCcEEEEeccCh
Q 000511 1335 KEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSE--CKGMTVITIAHRI 1412 (1455)
Q Consensus 1335 ~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~--~~~~TvI~IaHrl 1412 (1455)
.....-. |-... ...||-|||.|+++--|++-+.+|+++||=-+--|+.=.+...+.+--. -.|+||+.|||+-
T Consensus 434 ~~ktsl~--d~~fs--~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd 509 (546)
T COG4615 434 AHKTSLN--DGRFS--NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDD 509 (546)
T ss_pred hhhhccc--CCccc--ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCc
Confidence 4322111 11111 1259999999999999999999999999999999999999887776433 2599999999999
Q ss_pred hhHhhhCEEEEEeCCeEEEeC
Q 000511 1413 STVLNMDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1413 ~ti~~~DrI~vl~~G~ive~G 1433 (1455)
..-..+||++.|++|+++|.-
T Consensus 510 ~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 510 HYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred hhhhhHHHHHHHhcCceeecc
Confidence 999999999999999999864
No 162
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=5.1e-40 Score=376.14 Aligned_cols=218 Identities=25% Similarity=0.339 Sum_probs=195.1
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.|+++|++++|+... .++|+|+||+|++||+++|+|++|||||||+++|.|+++ .+|+|.++|
T Consensus 2 ~i~~~nls~~~~~~~----~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr 76 (275)
T cd03289 2 QMTVKDLTAKYTEGG----NAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWR 76 (275)
T ss_pred eEEEEEEEEEeCCCC----CcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHh
Confidence 478999999996421 235999999999999999999999999999999999998 799999987
Q ss_pred -cEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccC
Q 000511 669 -SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 747 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 747 (1455)
.|+||||+|++|++|++||+....++++++..++++.++|+..+..+|++++|.++++|.+||||||||++||||++++
T Consensus 77 ~~i~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~ 156 (275)
T cd03289 77 KAFGVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSK 156 (275)
T ss_pred hhEEEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999964445677888999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHhccccCcc
Q 000511 748 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFW 825 (1455)
Q Consensus 748 ~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 825 (1455)
|+|+||||||++||+.+.+.+.+. +.. ..+++|+|+|||+++.+..||+|++|++|++++.|+++++......+..
T Consensus 157 p~illlDEpts~LD~~~~~~l~~~-l~~-~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~ 232 (275)
T cd03289 157 AKILLLDEPSAHLDPITYQVIRKT-LKQ-AFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQ 232 (275)
T ss_pred CCEEEEECccccCCHHHHHHHHHH-HHH-hcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHH
Confidence 999999999999999998877765 443 3457899999999999888999999999999999999999875544433
No 163
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=384.12 Aligned_cols=220 Identities=24% Similarity=0.375 Sum_probs=187.5
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 3889999999964 369999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEeCCCCCCCC-cHHHhcCcCCC-------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1298 VVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1298 ~VpQdp~lf~g-TIreNLdp~~~-------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
||||++.+|+. |++||+.+... .+.++..+ ...+.++.+|++.........||||||||++|||||+
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~ 152 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALA 152 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHh
Confidence 99999999985 99999975421 12222211 1223344446665566667789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHH
Q 000511 1370 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1446 (1455)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f 1446 (1455)
++|++|+||||||+||..+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|+++++++...|
T Consensus 153 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~~~~ 232 (353)
T PRK10851 153 VEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPATRF 232 (353)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccchH
Confidence 99999999999999999999999999988653 7899999999998766 89999999999999999999998876544
No 164
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=375.32 Aligned_cols=219 Identities=25% Similarity=0.459 Sum_probs=188.3
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.++++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999654456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCC--CCCCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1298 VVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1298 ~VpQdp--~lf~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
|+||+| .+++.|++||+.+... .+.++..+ ...+.++.+||+..+......||||||||++|||||+.+|
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVE-----RVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQP 159 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHH-----HHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 4667899999975321 12222111 1223333346665566666789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|+++++.+.
T Consensus 160 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 160 DIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999987653 7899999999999989999999999999999999998764
No 165
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=375.05 Aligned_cols=212 Identities=24% Similarity=0.392 Sum_probs=183.0
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999632 46999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCC--CCCCCcHHHhcCcCCC---CCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1298 VVPQSP--FLFEGSLRDNLDPFHM---NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1298 ~VpQdp--~lf~gTIreNLdp~~~---~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
|+||+| .++..|+++|+.+... .+. +++.++++.+ |+..........||||||||++|||||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~L~~~~~~~~~~LSgG~~qrv~laraL 153 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAV---------RMWDFRDKPPYHLSYGQKKRVAIAGVL 153 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHC---------CCHHHhcCChhhCCHHHHHHHHHHHHH
Confidence 999998 6788999999975321 121 2233333433 554444555568999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHh
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
+++|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+. .||||++|++|++++.|+++++.
T Consensus 154 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 154 AMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 99999999999999999999999999998764 4799999999999985 49999999999999999997653
No 166
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-40 Score=379.21 Aligned_cols=218 Identities=26% Similarity=0.413 Sum_probs=191.6
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
..|+++||+.+|+ ...+++|+||+|++||.+.+.|||||||||++++|.||..|++|+|.+||.|+..+|++ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999997 45799999999999999999999999999999999999999999999999999999987 6899
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCC----CChH----HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHM----NDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~----~~d~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1455)
++|+|+.-||+- ||+||+.++-. ..++ ++.++|+.+++. ..-......|||||+||++||||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~---------~~~~R~p~qLSGGQqQRVALARA 150 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLE---------GFADRKPHQLSGGQQQRVALARA 150 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCch---------hhhhhChhhhChHHHHHHHHHHH
Confidence 999999999986 99999987533 2333 445555555544 44455667899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCc
Q 000511 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1444 (1455)
Q Consensus 1368 lLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s 1444 (1455)
|..+|++|+||||-|+||.+-...++.-+++.. .+.|.|.|||+-+.... +|||+||++|+|...|+|+|+..+|.+
T Consensus 151 L~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~~ 230 (352)
T COG3842 151 LVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPAT 230 (352)
T ss_pred hhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcch
Confidence 999999999999999999999999998887653 38999999999887655 799999999999999999999999987
Q ss_pred HHH
Q 000511 1445 VFS 1447 (1455)
Q Consensus 1445 ~f~ 1447 (1455)
.|-
T Consensus 231 ~fV 233 (352)
T COG3842 231 RFV 233 (352)
T ss_pred HHH
Confidence 764
No 167
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=375.75 Aligned_cols=218 Identities=28% Similarity=0.437 Sum_probs=186.2
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCC--CCChHHHhcc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--NTPVRDLRGR 1295 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~--~i~~~~lR~~ 1295 (1455)
.|+++|++++|++ ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|++
T Consensus 5 ~l~~~~l~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSD-GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 5899999999963 346999999999999999999999999999999999999999999999999984 3446678899
Q ss_pred cEEEeCCC--CCCCCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1296 FAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1296 i~~VpQdp--~lf~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
++|+||+| .+|+.|++||+.... ..+.++.++. ..+.++.+|++........+||+|||||++|||||+.
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~ 158 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVM 158 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999998 578899999996531 1222222221 2233444466666667778999999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 159 ~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 159 EPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999987753 799999999999987 5999999999999999999999864
No 168
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=372.91 Aligned_cols=224 Identities=24% Similarity=0.342 Sum_probs=186.4
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCC--CCChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII--NTPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~--~i~~~ 1290 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 4699999999999999999999999999999999999987 4999999999997 45566
Q ss_pred HHhcccEEEeCCCCCCCC-cHHHhcCcCC---C--CCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---M--NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~g-TIreNLdp~~---~--~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1455)
.+|++++++||++.+|++ |+++|+.... . ... +++.++++..++.+.+ .........+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~q 156 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEV-----KDRLNDYPSNLSGGQRQ 156 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccch-----hhhhccChhhCCHHHHH
Confidence 788999999999999976 9999996421 1 011 2233344444332211 12345566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1361 rl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
|++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 157 RLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999875 8999999999999999999998
Q ss_pred ccCCcHHHH
Q 000511 1440 QDECSVFSS 1448 (1455)
Q Consensus 1440 ~~~~s~f~~ 1448 (1455)
+++...+.+
T Consensus 237 ~~~~~~~~~ 245 (253)
T PRK14267 237 ENPEHELTE 245 (253)
T ss_pred hCCCcHHHH
Confidence 765433433
No 169
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-39 Score=365.39 Aligned_cols=212 Identities=25% Similarity=0.399 Sum_probs=180.6
Q ss_pred cEEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHH---H
Q 000511 1218 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---L 1292 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~---l 1292 (1455)
.++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997432 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cccEEEeCCCCCCCC-cHHHhcCcC---CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000511 1293 R-GRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1293 R-~~i~~VpQdp~lf~g-TIreNLdp~---~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1455)
| ++++|+||+|.+|++ |+++|+... .....++.. ..+.+.++.+|++........+||||||||++||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~a 159 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN-----SRALEMLAAVGLEHRANHRPSELSGGERQRVAIARA 159 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHH
Confidence 3 679999999999876 999998642 111222111 112344455577766677777899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCC
Q 000511 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQGN 1434 (1455)
Q Consensus 1368 lLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~ 1434 (1455)
++++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+..+|++++|++|++++.|+
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 160 LVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999998763 4799999999999999999999999999998775
No 170
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=8.8e-37 Score=368.42 Aligned_cols=493 Identities=19% Similarity=0.201 Sum_probs=339.6
Q ss_pred HHHhhhhhhhhhhhcccCCCC---CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Q 000511 909 ASRNGNDLWLSYWVDTTGSSQ---TKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLF 985 (1455)
Q Consensus 909 ~~~~~~~~wl~~w~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~f 985 (1455)
......++|+..|.....+.- ........+.+|.+++.+.......+.++......+.-..+-+.++++-+...-.|
T Consensus 57 l~~v~~~v~~~~w~~~~~~aL~~~d~~~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y 136 (604)
T COG4178 57 LLSVRGQVLLNDWNGPFYNALARRDLAAFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYY 136 (604)
T ss_pred HHHhheeeeeHhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchH
Confidence 334445677777764321100 01112233567777777777777778888888888888888889999888777333
Q ss_pred cccCCh-----hhHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHhhhhHH--------------HHHH----HHHHHHH
Q 000511 986 FDQTPG-----GRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLS--------------YVQV----FFLLLLV 1042 (1455)
Q Consensus 986 f~~~~~-----G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~--------------~~~~----~~~l~~~ 1042 (1455)
+..... -+.=+|+.+|+...-+..-.....++.++++++...+++. +..| |++++.+
T Consensus 137 ~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya 216 (604)
T COG4178 137 RLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYA 216 (604)
T ss_pred HHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHH
Confidence 332221 2344688888876655444444444444444443333222 1111 1111122
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHhhchhHhHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 1043 PFW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1121 (1455)
Q Consensus 1043 p~~-~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl 1121 (1455)
++. .+..++.+...+..-+..+.|..-|. ...-.-+....|-.|+.|+...++..+..+.-.+.+......+.++
T Consensus 217 ~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~----~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l 292 (604)
T COG4178 217 ISASLLTHLIGRPLIRLNFERQKLEADFRY----SLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRL 292 (604)
T ss_pred HHHHHHHHHHccccccccHHHHHHHHHHHH----HHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 211 12224444444544455555555443 3344556778899999999888888777777666665555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---
Q 000511 1122 SLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV--- 1198 (1455)
Q Consensus 1122 ~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~--- 1198 (1455)
+..-...+-+.+.+ ..+.. ....-.+..+.|.++.+.....++...+++++..+.++.+-...+.|+.++.+.
T Consensus 293 ~~~~~gy~~~s~v~-P~li~---ap~~f~g~i~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~ 368 (604)
T COG4178 293 TWFQLGYGWLSVVL-PILIA---APRYFSGQITFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEA 368 (604)
T ss_pred HHhhhhhhHHHHHH-HHHhc---cHhhhcCcChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 44433333222211 11100 001113456778888888888899999999999999999999999999998732
Q ss_pred ---CccccccCC-CCCCCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCC
Q 000511 1199 ---PQEELCGYQ-SLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG 1274 (1455)
Q Consensus 1199 ---~~e~~~~~~-~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~ 1274 (1455)
+++...... .....-..+..|+|+|++..-+++. ..+++.||+|+|||.+-|.|+||||||||+++|.|+.+--+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~ 447 (604)
T COG4178 369 AQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGS 447 (604)
T ss_pred ccCcccccCcccccccccccccceeEEeeeeEECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCC
Confidence 222111100 0000000147899999999987654 78999999999999999999999999999999999999999
Q ss_pred ceEEECCEeCCCCChHHHhcccEEEeCCCCCCCCcHHHhcC-cCCC--CChHHHHHHHHHhcHHHHHHhC-CCchhhhcC
Q 000511 1275 GQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLD-PFHM--NDDLKIWSVLEKCHVKEEVEAV-GLETFVKES 1350 (1455)
Q Consensus 1275 G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~gTIreNLd-p~~~--~~d~ei~~aL~~~~l~~~i~~l-gLdt~v~e~ 1350 (1455)
|+|.+-. -+++-++||.|.+-.||+||-|. |... ++|+|+.++|.+|||.+.++++ +.+. -+
T Consensus 448 G~I~~P~-----------~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~~-W~-- 513 (604)
T COG4178 448 GRISMPA-----------DSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEEDR-WD-- 513 (604)
T ss_pred CceecCC-----------CCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccCc-Hh--
Confidence 9986631 23589999999999999999985 3333 7899999999999999999987 4443 22
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEe
Q 000511 1351 GISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILD 1425 (1455)
Q Consensus 1351 G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~ 1425 (1455)
.-||+|||||+++||.+|++|++++||||||+||.++|..+.+.++++.+++|||.|+||.....-.++.+-++
T Consensus 514 -~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 514 -RVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred -hhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 25999999999999999999999999999999999999999999999999999999999988777777776664
No 171
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.2e-39 Score=370.26 Aligned_cols=220 Identities=30% Similarity=0.397 Sum_probs=182.4
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh---HHHhcc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~---~~lR~~ 1295 (1455)
|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~-~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPN-GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCC-CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 689999999962 2469999999999999999999999999999999999999999999999999987654 346889
Q ss_pred cEEEeCCCCCCC-CcHHHhcCcCCCCCh---HHHH---HHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1296 FAVVPQSPFLFE-GSLRDNLDPFHMNDD---LKIW---SVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1296 i~~VpQdp~lf~-gTIreNLdp~~~~~d---~ei~---~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
++|+||++.+|+ .|+++|+........ ..+. ..-++....+.++.+|++........+||||||||++|||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 160 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVAIARAL 160 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHH
Confidence 999999999886 599999964211000 0000 000111223344455676666677788999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 161 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 161 AQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 99999999999999999999999999998764 37899999999999865 8999999999999999999974
No 172
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.1e-39 Score=380.54 Aligned_cols=217 Identities=28% Similarity=0.415 Sum_probs=184.3
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
..|+++|++++|+. ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|+++
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999964 46999999999999999999999999999999999999999999999999998755 4578999
Q ss_pred EEEeCCCCCCC-CcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1297 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1297 ~~VpQdp~lf~-gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
+|+||++.+|. .|++||+.++.. .++.+..+. ..+.++.+|+.........+||+|||||++|||||+++|
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P 157 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDP 157 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCC
Confidence 99999999886 599999975332 122222111 123334345544444444579999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
++|+|||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 158 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 158 DVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999998864 47899999999999976 999999999999999999999764
No 173
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=377.67 Aligned_cols=218 Identities=29% Similarity=0.448 Sum_probs=184.7
Q ss_pred EEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCC----CChHH
Q 000511 1219 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----TPVRD 1291 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~----i~~~~ 1291 (1455)
++++|++++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996432 469999999999999999999999999999999999999999999999999863 34667
Q ss_pred HhcccEEEeCCC--CCCCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000511 1292 LRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1365 (1455)
Q Consensus 1292 lR~~i~~VpQdp--~lf~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LA 1365 (1455)
.|++++||||+| .+|+.|+++|+.+... .+.++..+ ...+.++.+||+. ........||||||||++||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lA 157 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQ-----KAREMIELVGLPEELLARSPFELSGGQMRRVAIA 157 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHH
Confidence 888999999998 6888899999964321 23332221 1233444557753 34566778999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1366 RAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
|||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 158 raL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 236 (290)
T PRK13634 158 GVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFAD 236 (290)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999987643 7899999999999865 899999999999999999998764
No 174
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=372.69 Aligned_cols=222 Identities=27% Similarity=0.402 Sum_probs=187.0
Q ss_pred CCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCC--C
Q 000511 1215 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--T 1287 (1455)
Q Consensus 1215 ~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i 1287 (1455)
+.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3568999999999963 4699999999999999999999999999999999999975 89999999999975 3
Q ss_pred ChHHHhcccEEEeCCCCCCCCcHHHhcCcCCC---C--C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhH
Q 000511 1288 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1358 (1455)
Q Consensus 1288 ~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~---~--~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQ 1358 (1455)
+...+|++++|+||+|.+|++|++||+.+... . + ++++.++++.+++.+.+ ....+....+|||||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq 168 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-----KDRLHEPGTGLSGGQ 168 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-----hHHhhCCcccCCHHH
Confidence 45678899999999999999999999964211 1 1 12234444444432211 123455667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhH
Q 000511 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1437 (1455)
Q Consensus 1359 rQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~e 1437 (1455)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 248 (267)
T PRK14235 169 QQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEK 248 (267)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999887667899999999999965 79999999999999999999
Q ss_pred HhccCC
Q 000511 1438 LLQDEC 1443 (1455)
Q Consensus 1438 Ll~~~~ 1443 (1455)
+..++.
T Consensus 249 ~~~~~~ 254 (267)
T PRK14235 249 MFTNPD 254 (267)
T ss_pred HHhCCC
Confidence 986544
No 175
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=7.1e-40 Score=333.34 Aligned_cols=207 Identities=29% Similarity=0.385 Sum_probs=180.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH---HHhcc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~---~lR~~ 1295 (1455)
|+|+||+.+|+.+ +++|+||||+|++||.+-++||||||||||+++|++...|+.|+|.++|.|+++++.+ -||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7999999999876 7899999999999999999999999999999999999999999999999999887754 57999
Q ss_pred cEEEeCCCCCCCC-cHHHhcCcCCC---CCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000511 1296 FAVVPQSPFLFEG-SLRDNLDPFHM---NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1296 i~~VpQdp~lf~g-TIreNLdp~~~---~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1455)
||+|.||--|... |+.||+.+--. .+. +++.++|+.+||.+ ....-...|||||+||+|||||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~---------k~~~lP~~LSGGEQQRvaIARA 151 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKH---------KARALPSQLSGGEQQRVAIARA 151 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccch---------hhhcCccccCchHHHHHHHHHH
Confidence 9999999988765 99999864211 122 34556666666554 4444566899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhh-CEEEEEeCCeEEEeCCh
Q 000511 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNM-DEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1368 lLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~~-DrI~vl~~G~ive~G~p 1435 (1455)
+..+|++||=||||-|||+++...|++.+.+.. .|.||++.||+.+.+.++ -|++.+++|+++....+
T Consensus 152 iV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 152 IVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999998764 599999999999999987 78999999999976554
No 176
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.3e-39 Score=385.85 Aligned_cols=222 Identities=25% Similarity=0.413 Sum_probs=191.3
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCC--ceEEECCEeCCCCChHHHh
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG--GQILVDGLNIINTPVRDLR 1293 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~--G~I~IdG~di~~i~~~~lR 1293 (1455)
.|.|+++||+++|+. ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++.+.+.. +
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~--~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH--K 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH--H
Confidence 478999999999964 369999999999999999999999999999999999999999 9999999999877653 6
Q ss_pred cccEEEeCCCCCCCC-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1294 GRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1294 ~~i~~VpQdp~lf~g-TIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
+++++|+|++.+|+. |++||+.+.- ..++.++.+ ...+.++.+||+...+....+||||||||++|||||+
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~ 153 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIA 153 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHh
Confidence 789999999999977 9999997532 123333222 1233444457776677777899999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC---CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcH
Q 000511 1370 KSSKVLCLDECTANVDAQTASILQNAISSECK---GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSV 1445 (1455)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~---~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~ 1445 (1455)
++|++|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++...
T Consensus 154 ~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p~~~ 233 (362)
T TIGR03258 154 IEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAPADG 233 (362)
T ss_pred cCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcCcH
Confidence 99999999999999999999999999987643 6899999999998765 8999999999999999999999887655
Q ss_pred H
Q 000511 1446 F 1446 (1455)
Q Consensus 1446 f 1446 (1455)
|
T Consensus 234 ~ 234 (362)
T TIGR03258 234 F 234 (362)
T ss_pred H
Confidence 5
No 177
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1e-39 Score=364.11 Aligned_cols=202 Identities=29% Similarity=0.394 Sum_probs=171.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH---HHhcc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~---~lR~~ 1295 (1455)
|+++|++++|+.+.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999964434699999999999999999999999999999999999999999999999999876543 47889
Q ss_pred cEEEeCCCCCCC-CcHHHhcCcCC---CCC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000511 1296 FAVVPQSPFLFE-GSLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1296 i~~VpQdp~lf~-gTIreNLdp~~---~~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1455)
++|+||+|.+|+ .|++||+.... ... ++++.++++ .+|++........+||||||||++||||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~---------~~~l~~~~~~~~~~LSgG~~qrv~lara 152 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALE---------KVGLEGKAHALPMQLSGGEQQRVAIARA 152 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHH---------HcCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 999999999887 59999996431 111 223333444 4455554555556899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeE
Q 000511 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1429 (1455)
Q Consensus 1368 lLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1429 (1455)
|+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++
T Consensus 153 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 153 IVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998764 47899999999999875 899999999985
No 178
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=8.1e-40 Score=365.48 Aligned_cols=206 Identities=29% Similarity=0.390 Sum_probs=175.6
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHH----H
Q 000511 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD----L 1292 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~----l 1292 (1455)
|+++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996421 46999999999999999999999999999999999999999999999999998876433 4
Q ss_pred hcccEEEeCCCCCCCC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1293 RGRFAVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1293 R~~i~~VpQdp~lf~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
|++++|+||+|.+|.+ |++||+..... ....+. ...+.+.++.+|++........+||||||||++||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al 155 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARAL 155 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHH
Confidence 6789999999999987 99999975321 111111 11234455556777777777778999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhhCEEEEEeCCeE
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHL 1429 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~i 1429 (1455)
+++|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++
T Consensus 156 ~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 156 ANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred ccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999988754 7899999999999888999999999974
No 179
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=368.74 Aligned_cols=226 Identities=26% Similarity=0.379 Sum_probs=188.8
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCCCChHHH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTPVRDL 1292 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i~~~~l 1292 (1455)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999964 3699999999999999999999999999999999999974 69999999999998888889
Q ss_pred hcccEEEeCCCCCC-CCcHHHhcCcCCC-----CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1293 RGRFAVVPQSPFLF-EGSLRDNLDPFHM-----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1293 R~~i~~VpQdp~lf-~gTIreNLdp~~~-----~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
|++++|+||+|.+| +.|++||+.+... .. ++++.++++.+++.+.+ +........+||||||||+
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgG~~qrv 155 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEV-----KDRLDAPAGKLSGGQQQRL 155 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcch-----hhhhcCCcccCCHHHHHHH
Confidence 99999999999755 5799999964311 01 12344444444432211 1234455668999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++.++
T Consensus 156 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14247 156 CIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVFTN 235 (250)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHHcC
Confidence 999999999999999999999999999999999998767899999999999986 4899999999999999999999876
Q ss_pred CCcHHHHHH
Q 000511 1442 ECSVFSSFV 1450 (1455)
Q Consensus 1442 ~~s~f~~l~ 1450 (1455)
+...+.+.+
T Consensus 236 ~~~~~~~~~ 244 (250)
T PRK14247 236 PRHELTEKY 244 (250)
T ss_pred CccHHHHHH
Confidence 554454433
No 180
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-40 Score=360.02 Aligned_cols=205 Identities=27% Similarity=0.356 Sum_probs=172.4
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
|++++++..|... ..+...+|+|+||+|++||+.+|+|.||+|||||++++.+.-.|++|+|.++|
T Consensus 2 I~l~~vsK~~~~~-~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 2 IELENVSKTFGQT-GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred eEEEeeeeeeccC-CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 6789999888763 22234579999999999999999999999999999999999999999999987
Q ss_pred ---cEEEEcCCCCCCC-cCHHHHhccCCCC----CHHHHHHHHH---HhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 ---SIAYVPQVPWILS-GTIRDNILFGKNY----DPQSYSETLK---ACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~~----~~~~~~~v~~---~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
+||+++|++.|++ .||.|||.|..+. .++..++|.+ ..+|.+. -+....+||||||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk-----------~~~yP~qLSGGQKQR 149 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDK-----------ADRYPAQLSGGQKQR 149 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhh-----------hccCchhcCcchhhH
Confidence 5999999999998 5999999997432 2334444444 4444432 345567999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1455)
|+|||||..+|+|||.|||||||||+|.+.|++.+..-....|-|+++|||.++.++. ||||.+|++|+++++|+..++
T Consensus 150 VaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 150 VAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred HHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 9999999999999999999999999999999986332223347799999999999987 999999999999999999887
Q ss_pred Hh
Q 000511 817 AV 818 (1455)
Q Consensus 817 ~~ 818 (1455)
-.
T Consensus 230 F~ 231 (339)
T COG1135 230 FA 231 (339)
T ss_pred hc
Confidence 54
No 181
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2e-39 Score=381.07 Aligned_cols=226 Identities=23% Similarity=0.390 Sum_probs=189.1
Q ss_pred cEEEEEEEEEecCC-----------CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCC
Q 000511 1218 LIEFQNVTMRYKPS-----------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN 1286 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~-----------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~ 1286 (1455)
.++++|++++|+.. ...+++||||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 58999999999631 2469999999999999999999999999999999999999999999999999998
Q ss_pred CChHH---HhcccEEEeCCC--CCCC-CcHHHhcCc----CC-CCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCC
Q 000511 1287 TPVRD---LRGRFAVVPQSP--FLFE-GSLRDNLDP----FH-MNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISF 1354 (1455)
Q Consensus 1287 i~~~~---lR~~i~~VpQdp--~lf~-gTIreNLdp----~~-~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~L 1354 (1455)
++.+. +|++++||+|+| .+++ .||++|+.. +. ..+.++..+. ..+.++.+|++ .........|
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~-----~~~~l~~vgl~~~~~~~~p~~L 162 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDR-----VKAMMLKVGLLPNLINRYPHEF 162 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHcCCChHHhcCCcccC
Confidence 87554 678999999999 4774 699999853 11 1233332221 12334445663 3456667789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEE
Q 000511 1355 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVE 1431 (1455)
Q Consensus 1355 SgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1431 (1455)
|||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|
T Consensus 163 SgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive 242 (331)
T PRK15079 163 SGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVE 242 (331)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999987643 7899999999999986 99999999999999
Q ss_pred eCChhHHhccCCcHHHH
Q 000511 1432 QGNPQTLLQDECSVFSS 1448 (1455)
Q Consensus 1432 ~G~p~eLl~~~~s~f~~ 1448 (1455)
.|+++++++++...|.+
T Consensus 243 ~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 243 LGTYDEVYHNPLHPYTK 259 (331)
T ss_pred EcCHHHHHcCCCCHHHH
Confidence 99999999876555544
No 182
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-39 Score=349.72 Aligned_cols=196 Identities=29% Similarity=0.397 Sum_probs=167.6
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.+++++|+.+|.. ..||+|+||+|++||.|+|+||||||||||++++.|+..|++|+|.+||.++... ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 5899999999975 5799999999999999999999999999999999999999999999999988443 45799
Q ss_pred EEeCCCCCCCC-cHHHhcCcCCCC---C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1298 VVPQSPFLFEG-SLRDNLDPFHMN---D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1298 ~VpQdp~lf~g-TIreNLdp~~~~---~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
||+|++.||+- ||++|+...-+. + .+...+.|+.+ ||...-+.-...||||||||++|||||+
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~V---------gL~~~~~~~P~qLSGGMrQRVaiARAL~ 146 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELV---------GLAGFEDKYPHQLSGGMRQRVAIARALA 146 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHc---------CCcchhhcCccccChHHHHHHHHHHHHh
Confidence 99999999997 999998654322 1 12333444444 5555555667789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeC--CeE
Q 000511 1370 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDH--GHL 1429 (1455)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~--G~i 1429 (1455)
.+|+||+||||.++||+.|...+|+-+.+.. .++||++|||+++.... +|||+||.+ |+|
T Consensus 147 ~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 147 TRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred cCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999887754 36999999999997654 899999999 555
No 183
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-39 Score=363.27 Aligned_cols=206 Identities=29% Similarity=0.446 Sum_probs=174.4
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. .+++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEE
Confidence 478999999964 469999999999999999999999999999999999999999999999999986553 4678999
Q ss_pred EeCCCCCCC-CcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf~-gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||+|.+|. .|+++|+..... .+.++.. ....+.++.+|++........+||||||||++|||||+++|++
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~ 151 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIR-----ARVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSL 151 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 599999964311 1111111 1123444555776666666678999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
|||||||++||+++.+.+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++++.|
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 152 LLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998864 37899999999998765 8999999999998875
No 184
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-39 Score=375.67 Aligned_cols=219 Identities=25% Similarity=0.363 Sum_probs=183.9
Q ss_pred cEEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCC--------
Q 000511 1218 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN-------- 1286 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~-------- 1286 (1455)
.|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999996432 269999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CChHHHhcccEEEeCCC--CCCCCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCc-
Q 000511 1287 ----------------TPVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE- 1344 (1455)
Q Consensus 1287 ----------------i~~~~lR~~i~~VpQdp--~lf~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLd- 1344 (1455)
.+...+|++++||||+| .+|..|++||+.+.. ..+.+++.+. ..+.++.+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~ 156 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELVGLDE 156 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHcCCCh
Confidence 13467789999999987 688889999997542 1233333221 12334445775
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hhCEEE
Q 000511 1345 TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEIL 1422 (1455)
Q Consensus 1345 t~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~-~~DrI~ 1422 (1455)
...+....+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+. .||||+
T Consensus 157 ~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~ 236 (305)
T PRK13651 157 SYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTI 236 (305)
T ss_pred hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEE
Confidence 45666777899999999999999999999999999999999999999999998764 4899999999999875 499999
Q ss_pred EEeCCeEEEeCChhHHhcc
Q 000511 1423 ILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1423 vl~~G~ive~G~p~eLl~~ 1441 (1455)
+|++|++++.|+++++.++
T Consensus 237 vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 237 FFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEECCEEEEECCHHHHhcC
Confidence 9999999999999998875
No 185
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-39 Score=373.03 Aligned_cols=220 Identities=23% Similarity=0.379 Sum_probs=187.6
Q ss_pred cEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1218 LIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
.|+++||+++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 24699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEeCCC--CCCCCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1297 AVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1297 ~~VpQdp--~lf~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
+|+||+| .++..|+.+|+.+.. ..+++++.+. ..+.++.+|++.........||||||||++|||||+++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~ 158 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKR-----VDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALR 158 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 9999998 467889999997431 1233332211 12223333555445556678999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|++++++++.
T Consensus 159 p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (277)
T PRK13642 159 PEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATS 231 (277)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCH
Confidence 999999999999999999999999987653 78999999999999889999999999999999999998643
No 186
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.5e-39 Score=367.38 Aligned_cols=220 Identities=22% Similarity=0.371 Sum_probs=187.7
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH-hccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l-R~~i 1296 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+++
T Consensus 2 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 2 ILYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred eEEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 3789999999964 469999999999999999999999999999999999999999999999999988776654 5679
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCCCChHHH-------HHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKI-------WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~~~d~ei-------~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
+|+||++.+|++ |++||+....... ..+ .....+....+.++.+|++.........||||||||++||||+
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~laral 158 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRD-KSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGMLL 158 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcc-cccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 999999999987 9999997542110 000 0001112234455555777767777778999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
+++|++|+|||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 159 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 159 MQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred hcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 9999999999999999999999999999987668999999999999976 89999999999999999999875
No 187
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.3e-39 Score=372.69 Aligned_cols=227 Identities=26% Similarity=0.343 Sum_probs=189.2
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH---HHhc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRG 1294 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~---~lR~ 1294 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5899999999963 4699999999999999999999999999999999999999999999999999876643 3578
Q ss_pred ccEEEeCCCCCCCC-cHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1295 RFAVVPQSPFLFEG-SLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1295 ~i~~VpQdp~lf~g-TIreNLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
+++|+||++.+|++ |++||+.+. ...+.++.. ....+.++.+|++.........||||||||++||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~ 159 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLH-----STVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA 159 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHh
Confidence 89999999999987 999999642 111211111 11223344456665556666789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHH
Q 000511 1370 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1446 (1455)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f 1446 (1455)
++|++|||||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++.+++....
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~ 239 (269)
T PRK11831 160 LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANPDPRV 239 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCCcHHH
Confidence 99999999999999999999999999987643 7899999999999876 89999999999999999999987654444
Q ss_pred HHHHH
Q 000511 1447 SSFVR 1451 (1455)
Q Consensus 1447 ~~l~~ 1451 (1455)
+.++.
T Consensus 240 ~~~~~ 244 (269)
T PRK11831 240 RQFLD 244 (269)
T ss_pred HHHHH
Confidence 55543
No 188
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.4e-39 Score=367.17 Aligned_cols=216 Identities=25% Similarity=0.413 Sum_probs=185.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH-hcccE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1297 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l-R~~i~ 1297 (1455)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999963 369999999999999999999999999999999999999999999999999988776554 56899
Q ss_pred EEeCCCCCCCC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1298 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1298 ~VpQdp~lf~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
|+||++.+|++ |+++|+..... ...++.. ..+.+.++.+|++........+||+|||||++||||++++|+
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 153 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPK 153 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999987 99999964321 1111111 123445555678777777778999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 154 llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 223 (232)
T cd03218 154 FLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAAN 223 (232)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhcC
Confidence 999999999999999999999998764 47899999999987765 899999999999999999998753
No 189
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3.8e-39 Score=383.08 Aligned_cols=221 Identities=25% Similarity=0.444 Sum_probs=189.5
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
..++++|++++|.. .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999963 4699999999999999999999999999999999999999999999999999887765 5789
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
+||+|++.+|+. ||+||+.+.-. .++.++.+ .+.+.++.+|++.........||||||||++|||||+++|
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P 163 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP-----RVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKP 163 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999976 99999975321 22222211 1223344446666666667789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHH
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1446 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f 1446 (1455)
++|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+.+.+.. ||||++|++|+|++.|+|+++++++...|
T Consensus 164 ~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~~~~ 240 (375)
T PRK09452 164 KVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLF 240 (375)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 99999999999999999999999988653 7899999999998765 89999999999999999999999876555
No 190
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=369.97 Aligned_cols=223 Identities=27% Similarity=0.389 Sum_probs=185.3
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCC--CChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~~~ 1290 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999964 469999999999999999999999999999999999997 479999999999864 3455
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCCC---CCh-----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---NDD-----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~~---~~d-----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
.+|+.++|+||++.+|++|+++|+.+... ..+ +++.++++.++++.. .....+....+||||||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~qr~ 156 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKE-----TKDNLDRNAQAFSGGQQQRI 156 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcc-----hHHHhccChhhCCHHHHHHH
Confidence 67889999999999999999999975321 111 123333333333210 01233455678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++++|+++||||||++||+++.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++..+
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14251 157 CIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMFIA 236 (251)
T ss_pred HHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999987677999999999999876 899999999999999999999876
Q ss_pred CCcHHH
Q 000511 1442 ECSVFS 1447 (1455)
Q Consensus 1442 ~~s~f~ 1447 (1455)
+.-.|.
T Consensus 237 ~~~~~~ 242 (251)
T PRK14251 237 PKKQIT 242 (251)
T ss_pred CCCHHH
Confidence 543343
No 191
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=9.3e-39 Score=367.07 Aligned_cols=217 Identities=27% Similarity=0.379 Sum_probs=190.2
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcc
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1295 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~ 1295 (1455)
.+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~~----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLVG----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEec----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 4579999999852 4699999999999999999999999999999999999999999999998 3
Q ss_pred cEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1296 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1296 i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
++|+||++.+|++|+++|+.+.....+.++.++++.+++.+.+..+ +.++.+++.+.+||+|||||++||||++++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999865444445566778888888877776 67788888888999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHH-HHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccCCcHHHHHH
Q 000511 1374 VLCLDECTANVDAQTASILQNA-ISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1450 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~-i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~ 1450 (1455)
||||||||++||+++.+.+.+. +++..+++|||+|||+++.+..||+|++|++|++++.|+++++.+.. +.|.+.+
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~-~~~~~~~ 256 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLR-PDFSSKL 256 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcc-hHHHHHH
Confidence 9999999999999999988775 45555689999999999999889999999999999999999998643 3455433
No 192
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=385.76 Aligned_cols=220 Identities=28% Similarity=0.393 Sum_probs=187.0
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|+. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999964 3699999999999999999999999999999999999999999999999999877653 57899
Q ss_pred EEeCCCCCCCC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1298 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1298 ~VpQdp~lf~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
||||++.+|+. |++||+.+... .+..+..+ ...+.++.+|++.........||||||||++|||||+++|+
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~ 153 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPS 153 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999975 99999975321 12222111 12334444566655666667899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHH
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1446 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f 1446 (1455)
+||||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++..++...|
T Consensus 154 lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~~~ 229 (369)
T PRK11000 154 VFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPANRF 229 (369)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 9999999999999999999999987643 7899999999998765 89999999999999999999998776544
No 193
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.5e-39 Score=365.83 Aligned_cols=227 Identities=26% Similarity=0.383 Sum_probs=189.2
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCC--------h
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--------V 1289 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~--------~ 1289 (1455)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999963 36999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhcccEEEeCCCCCCC-CcHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000511 1290 RDLRGRFAVVPQSPFLFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1364 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp~lf~-gTIreNLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1364 (1455)
..+|++++|+||++.+|+ .|++||+... .....++..+ ...+.++.+|++........+||||||||++|
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~l 155 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKVGLAGKETSYPRRLSGGQQQRVAI 155 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCcchhhCChhhCChHHHHHHHH
Confidence 567889999999999886 5999999642 1112211111 12344555677766677778999999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1365 ARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
|||++++|++|||||||++||.++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 156 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 235 (250)
T PRK11264 156 ARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFADP 235 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcCC
Confidence 999999999999999999999999999999998764 47899999999999876 8999999999999999999997654
Q ss_pred Cc-HHHHHHH
Q 000511 1443 CS-VFSSFVR 1451 (1455)
Q Consensus 1443 ~s-~f~~l~~ 1451 (1455)
.- ..+.++.
T Consensus 236 ~~~~~~~~~~ 245 (250)
T PRK11264 236 QQPRTRQFLE 245 (250)
T ss_pred CCHHHHHHHH
Confidence 32 3344443
No 194
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.5e-39 Score=364.75 Aligned_cols=217 Identities=29% Similarity=0.472 Sum_probs=186.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCC--ChHHHhccc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT--PVRDLRGRF 1296 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i--~~~~lR~~i 1296 (1455)
++++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999963 4699999999999999999999999999999999999999999999999999764 345678899
Q ss_pred EEEeCCCCCCC-CcHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1297 AVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1297 ~~VpQdp~lf~-gTIreNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
+|+||++.+|. .|+++|+.+.. ..+..+..+ ...+.++.+|++.........||+|||||++||||++++
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 154 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVK 154 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcC
Confidence 99999999886 59999996531 111221111 223455556777777777788999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
|++++|||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 155 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 155 PKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 99999999999999999999999998764 47999999999999865 8999999999999999999998654
No 195
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.9e-39 Score=368.84 Aligned_cols=221 Identities=23% Similarity=0.360 Sum_probs=186.8
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCC--------
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT-------- 1287 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i-------- 1287 (1455)
.+.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999964 4699999999999999999999999999999999999999999999999998642
Q ss_pred -----ChHHHhcccEEEeCCCCCCCC-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhh-hcCCCCCCh
Q 000511 1288 -----PVRDLRGRFAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGISFSV 1356 (1455)
Q Consensus 1288 -----~~~~lR~~i~~VpQdp~lf~g-TIreNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v-~e~G~~LSg 1356 (1455)
....+|++++|+||++.+|++ |++||+.... ...+.+.. ..+.+.++.+|++... +.....|||
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~~LS~ 155 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEAR-----ERAVKYLAKVGIDERAQGKYPVHLSG 155 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHH-----HHHHHHHHHcCCChhhhhCCcccCCH
Confidence 135678899999999999985 9999996421 11111111 1123445555776554 566678999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCC
Q 000511 1357 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1434 (1455)
Q Consensus 1357 GQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1434 (1455)
|||||++|||||+++|+++||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|++++.|+
T Consensus 156 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (257)
T PRK10619 156 GQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGA 235 (257)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998764 48999999999999986 89999999999999999
Q ss_pred hhHHhccCC
Q 000511 1435 PQTLLQDEC 1443 (1455)
Q Consensus 1435 p~eLl~~~~ 1443 (1455)
++++.+.+.
T Consensus 236 ~~~~~~~~~ 244 (257)
T PRK10619 236 PEQLFGNPQ 244 (257)
T ss_pred HHHhhhCcc
Confidence 999986543
No 196
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2e-39 Score=350.05 Aligned_cols=178 Identities=33% Similarity=0.566 Sum_probs=166.4
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|+...+++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999975434699999999999999999999999999999999999999999999999998776 6678899999
Q ss_pred EeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000511 1299 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1455)
Q Consensus 1299 VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLD 1378 (1455)
+||+|.+|++|++||+ ..+||+|||||++||||++++|++||||
T Consensus 80 ~~q~~~~~~~tv~~~i------------------------------------~~~LS~G~~qrv~laral~~~p~~lllD 123 (178)
T cd03247 80 LNQRPYLFDTTLRNNL------------------------------------GRRFSGGERQRLALARILLQDAPIVLLD 123 (178)
T ss_pred EccCCeeecccHHHhh------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999997 3479999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCeEEEeC
Q 000511 1379 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1379 EaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1433 (1455)
|||++||.++.+.+.+.|++..+++|+|+++|+++.+..||++++|++|++++.|
T Consensus 124 EP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 124 EPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999998877789999999999999889999999999998865
No 197
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=6.2e-39 Score=366.21 Aligned_cols=218 Identities=30% Similarity=0.483 Sum_probs=186.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCC----------
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---------- 1288 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~---------- 1288 (1455)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999964 46999999999999999999999999999999999999999999999999997653
Q ss_pred ---hHHHhcccEEEeCCCCCCC-CcHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000511 1289 ---VRDLRGRFAVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1455)
Q Consensus 1289 ---~~~lR~~i~~VpQdp~lf~-gTIreNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1455)
...+|++++++||++.+|+ .|+++|+.... ....++.. ..+.+.++.+|++...+.....|||||||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~q 153 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAE-----KRAMELLDMVGLADKADHMPAQLSGGQQQ 153 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhHhhcChhhcCHHHHH
Confidence 2467889999999999885 69999997421 11111111 12344555557776677777889999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhH
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1437 (1455)
Q Consensus 1361 rl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~e 1437 (1455)
|++||||++++|+++||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.+ |||+++|++|++++.|++++
T Consensus 154 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T TIGR03005 154 RVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDE 233 (252)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987653 7899999999999865 89999999999999999999
Q ss_pred HhccCC
Q 000511 1438 LLQDEC 1443 (1455)
Q Consensus 1438 Ll~~~~ 1443 (1455)
+.+.+.
T Consensus 234 ~~~~~~ 239 (252)
T TIGR03005 234 IFRQPK 239 (252)
T ss_pred HhcCCC
Confidence 987654
No 198
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.8e-39 Score=362.66 Aligned_cols=209 Identities=28% Similarity=0.442 Sum_probs=176.5
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999996432 269999999999999999999999999999999999999999999999999976 346778999
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
+|+||+|.+|++ |++||+.... ..+.++..+ ...+.++.+|++........+||||||||++||||++++|
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDP 155 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999985421 112211111 1233444456666666677789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 156 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 156 PVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999998764 47899999999998876 8999999999998865
No 199
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.1e-39 Score=326.57 Aligned_cols=211 Identities=26% Similarity=0.425 Sum_probs=182.4
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|.+++|.++|.. .+ -..+++|++||+|||+||||||||||++++.||..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LP---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ce---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 567899999963 22 257899999999999999999999999999999999999999999999988875 567999
Q ss_pred EeCCCCCCCC-cHHHhcCcCC----CC---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFH----MN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~----~~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
+.||.-||.- ||++|+..+- +. ..+.+..++.++|+..+.+ .-...||||||||++|||+++|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~---------RLP~~LSGGqRQRvALARclvR 146 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLK---------RLPGELSGGQRQRVALARCLVR 146 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhh---------hCccccCchHHHHHHHHHHHhc
Confidence 9999999986 9999987553 22 2345677777777665544 3345799999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCc
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1444 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s 1444 (1455)
+.+||+||||.|+||+.-...|...+.+.. ++.|+++|||.++.++. +||++++|+|||++.|+-+++++.++.
T Consensus 147 ~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~~ 223 (231)
T COG3840 147 EQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKAS 223 (231)
T ss_pred cCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCCh
Confidence 999999999999999999999999887765 57899999999998865 899999999999999999999987653
No 200
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.3e-39 Score=362.61 Aligned_cols=207 Identities=25% Similarity=0.385 Sum_probs=175.8
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHH---Hh
Q 000511 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1293 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~---lR 1293 (1455)
++++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996422 46999999999999999999999999999999999999999999999999998887654 34
Q ss_pred -cccEEEeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1294 -GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1294 -~~i~~VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
++++|+||+|.+|+ .|++||+.... ..+..+. .+ ...+.++.+|++.........||||||||++||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~---~~--~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral 156 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEA---KE--RAYEMLEKVGLEHRINHRPSELSGGERQRVAIARAL 156 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHH---HH--HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 68999999999986 59999996521 1111111 11 123455555777667777778999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhhCEEEEEeCCeEE
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLV 1430 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~iv 1430 (1455)
+++|+||||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+..+|+|++|++|+++
T Consensus 157 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 157 VNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred hCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999998764 378999999999999889999999999986
No 201
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-39 Score=369.92 Aligned_cols=220 Identities=23% Similarity=0.377 Sum_probs=187.1
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCC--CCh
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPV 1289 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~~ 1289 (1455)
..|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 46999999999953 469999999999999999999999999999999999997 589999999999864 346
Q ss_pred HHHhcccEEEeCCCCCCCCcHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000511 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp~lf~gTIreNLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1455)
..+|+.++|+||++.+|++|+++|+.... ..++ +++.++++.+++.+.+ +...+.....||+|||||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LS~G~~qr 171 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-----KDDLHKSALTLSGGQQQR 171 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-----hhhhcCCcccCCHHHHHH
Confidence 67889999999999999999999996531 1111 2234444444443221 234566677899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1362 l~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
++||||++++|++|||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 172 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 251 (267)
T PRK14237 172 LCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIFT 251 (267)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999988778999999999998865 89999999999999999999987
Q ss_pred cCC
Q 000511 1441 DEC 1443 (1455)
Q Consensus 1441 ~~~ 1443 (1455)
.+.
T Consensus 252 ~~~ 254 (267)
T PRK14237 252 NPK 254 (267)
T ss_pred CCC
Confidence 553
No 202
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-39 Score=372.40 Aligned_cols=220 Identities=28% Similarity=0.460 Sum_probs=188.6
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCC---ceEEECCEeCCCCChHHHh
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG---GQILVDGLNIINTPVRDLR 1293 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~---G~I~IdG~di~~i~~~~lR 1293 (1455)
+.|+++|++++|++...++|+|+||+|++||++||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999996544469999999999999999999999999999999999999987 8999999999888877889
Q ss_pred cccEEEeCCC--CCCCCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1294 GRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1294 ~~i~~VpQdp--~lf~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
++++|+||+| .+++.|++||+.+.. ..++++..+ ...+.++.+|++...+....+||+|||||++||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral 158 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGIL 158 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHH
Confidence 9999999998 467889999997531 122322211 122334444666666666779999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+++|++|||||||++||..+.+.+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|+++++.+.
T Consensus 159 ~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 159 AVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999988653 7899999999999988999999999999999999998764
No 203
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=5.1e-39 Score=383.73 Aligned_cols=220 Identities=27% Similarity=0.426 Sum_probs=189.8
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.++++|++++|+. .++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++.+++...+|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999964 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCC-CCCcHHHhcCcCCC-----C------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000511 1298 VVPQSPFL-FEGSLRDNLDPFHM-----N------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1455)
Q Consensus 1298 ~VpQdp~l-f~gTIreNLdp~~~-----~------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1455)
++||++.+ |+.|++||+.++.. . +++++.++++.+++ ..........||||||||++||
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl---------~~~~~~~~~~LSgGerQRv~IA 151 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGV---------AQFADRPVTSLSGGERQRVLLA 151 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCC---------chhhcCChhhCCHHHHHHHHHH
Confidence 99999987 57799999965321 1 12234455555544 3334445568999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCC
Q 000511 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1366 RAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~ 1443 (1455)
|||+++|+||+|||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||||++|++|++++.|+|++++..+
T Consensus 152 rAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~~- 230 (402)
T PRK09536 152 RALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTAD- 230 (402)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCcH-
Confidence 99999999999999999999999999999998875 47899999999999954 8999999999999999999998743
Q ss_pred cHHHHHH
Q 000511 1444 SVFSSFV 1450 (1455)
Q Consensus 1444 s~f~~l~ 1450 (1455)
.+.+++
T Consensus 231 -~l~~~~ 236 (402)
T PRK09536 231 -TLRAAF 236 (402)
T ss_pred -HHHHHh
Confidence 455544
No 204
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-39 Score=368.24 Aligned_cols=220 Identities=27% Similarity=0.413 Sum_probs=183.8
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcC---CCC--CCceEEECCEeCCCC--ChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL---TPI--CGGQILVDGLNIINT--PVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl---~~~--~~G~I~IdG~di~~i--~~~ 1290 (1455)
.++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999964 4699999999999999999999999999999999997 454 589999999999764 346
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCC---CC-Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~---~~-~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
.+|++++|+||+|.+|++|+++|+.+.. .. .. +++.++++.+++.+. ++......+.+||||||||+
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~G~~qrv 155 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDE-----VKDKLKESAFALSGGQQQRL 155 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcc-----hhhhhhCCcccCCHHHHHHH
Confidence 7788999999999999999999996421 11 11 223333333333211 12345666778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++++|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 156 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~~ 235 (250)
T PRK14245 156 CIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFTN 235 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999999999987778999999999999865 899999999999999999999876
Q ss_pred CCc
Q 000511 1442 ECS 1444 (1455)
Q Consensus 1442 ~~s 1444 (1455)
+..
T Consensus 236 ~~~ 238 (250)
T PRK14245 236 PEK 238 (250)
T ss_pred CCC
Confidence 543
No 205
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=351.77 Aligned_cols=191 Identities=31% Similarity=0.390 Sum_probs=161.6
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--------cEEE
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAY 672 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~y 672 (1455)
.+.+++++.+|.. ..+|+|+||+|++||+++|+|||||||||||++|.|...|++|+|.++| .+||
T Consensus 3 ~l~i~~v~~~f~~------~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~ 76 (248)
T COG1116 3 LLEIEGVSKSFGG------VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGY 76 (248)
T ss_pred eEEEEeeEEEeCc------eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEE
Confidence 4678888888864 2359999999999999999999999999999999999999999999986 5899
Q ss_pred EcCCCCCCCc-CHHHHhccCCCCC-------HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHH
Q 000511 673 VPQVPWILSG-TIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 744 (1455)
Q Consensus 673 ~~Q~p~l~~~-ti~~nI~~g~~~~-------~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARal 744 (1455)
|+|++-|+.= ||+|||.||.+.. +++..+.++..+|...-+..| ..||||||||||||||+
T Consensus 77 vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiARAL 145 (248)
T COG1116 77 VFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIARAL 145 (248)
T ss_pred EeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHHHH
Confidence 9999998864 9999999986541 346777888888876554444 58999999999999999
Q ss_pred ccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeC--CeEE
Q 000511 745 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDK--GQVK 808 (1455)
Q Consensus 745 y~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~--G~i~ 808 (1455)
..+|++|||||||+|||+.|..++-+.++.--...++|+++|||++++.- -+|||++|.+ |+|.
T Consensus 146 ~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 146 ATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred hcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 99999999999999999999998877643221334689999999999855 4999999998 4553
No 206
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-39 Score=370.01 Aligned_cols=220 Identities=23% Similarity=0.405 Sum_probs=187.3
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|++..+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 58999999999754446999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEeCCCC--CCCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1298 VVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1298 ~VpQdp~--lf~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
|+||+|. ++..|+++|+..... ...++..+ .+.+.++.+|++........+||+|||||++||||++++|
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNP 161 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999994 445689999864321 12222111 1223344446655556667789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||||++|++|++++.|+++++.++.
T Consensus 162 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 233 (269)
T PRK13648 162 SVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDHA 233 (269)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcCH
Confidence 99999999999999999999999988643 78999999999999889999999999999999999997753
No 207
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-39 Score=377.49 Aligned_cols=226 Identities=25% Similarity=0.408 Sum_probs=186.8
Q ss_pred cEEEEEEEEEecCC--------CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh
Q 000511 1218 LIEFQNVTMRYKPS--------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV 1289 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~--------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~ 1289 (1455)
.|+++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 58999999999631 2469999999999999999999999999999999999999999999999999988875
Q ss_pred H---HHhcccEEEeCCCC--CCCC-cHHHhcCc----CCCCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhH
Q 000511 1290 R---DLRGRFAVVPQSPF--LFEG-SLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQ 1358 (1455)
Q Consensus 1290 ~---~lR~~i~~VpQdp~--lf~g-TIreNLdp----~~~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQ 1358 (1455)
. .+|+++++|||||. +++. |+.+|+.. .......+. +....+.++.+|++. ........|||||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~gL~~~~~~~~p~~LSgGq 159 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAER-----REKALAMMAKVGLRPEHYDRYPHMFSGGQ 159 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHCCCChHHhcCCCccCCHHH
Confidence 3 56789999999994 5553 89888742 111122111 112234444446643 3455667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCCh
Q 000511 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1359 rQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p 1435 (1455)
|||++|||||+.+|++||+||||++||..+.+.|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|.|++
T Consensus 160 ~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~ 239 (327)
T PRK11308 160 RQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTK 239 (327)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987643 8899999999999975 899999999999999999
Q ss_pred hHHhccCCcHHHH
Q 000511 1436 QTLLQDECSVFSS 1448 (1455)
Q Consensus 1436 ~eLl~~~~s~f~~ 1448 (1455)
+++++++...|.+
T Consensus 240 ~~~~~~p~hpyt~ 252 (327)
T PRK11308 240 EQIFNNPRHPYTQ 252 (327)
T ss_pred HHHhcCCCCHHHH
Confidence 9999876555554
No 208
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-39 Score=373.05 Aligned_cols=218 Identities=30% Similarity=0.463 Sum_probs=185.0
Q ss_pred EEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCC----ChHH
Q 000511 1219 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRD 1291 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i----~~~~ 1291 (1455)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999996432 3699999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcccEEEeCCC--CCCCCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000511 1292 LRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1365 (1455)
Q Consensus 1292 lR~~i~~VpQdp--~lf~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LA 1365 (1455)
+|++++|+||+| .+|+.|+++|+.+.. ..++++..+. ..+.++.+|++. ........||||||||++||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la 157 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALVGISESLFEKNPFELSGGQMRRVAIA 157 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCChhhhhCCcccCCHHHHHHHHHH
Confidence 888999999998 578899999996431 1222222211 233444557763 45666778999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1366 RAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
||++++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 158 GILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998764 37899999999998865 899999999999999999998764
No 209
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-39 Score=368.48 Aligned_cols=219 Identities=23% Similarity=0.385 Sum_probs=183.9
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC--C---CCceEEECCEeCCCC--ChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIINT--PVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~--~---~~G~I~IdG~di~~i--~~~ 1290 (1455)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 5899999999963 369999999999999999999999999999999999953 6 499999999998653 345
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcC----CCCC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPF----HMND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~----~~~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
.+|+.++|+||+|.+|+.|++||+... +... ++++.++++.+++.+. +....+....+||+|||||+
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~G~~qrv 157 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDE-----VKDRLHDSALGLSGGQQQRV 157 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchh-----HHHHHhcCcccCCHHHHHHH
Confidence 678899999999999999999999642 1111 1223334444443221 12345566678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++++|++|||||||++||.++.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 237 (252)
T PRK14239 158 CIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFMN 237 (252)
T ss_pred HHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999987667999999999998865 899999999999999999999876
Q ss_pred CC
Q 000511 1442 EC 1443 (1455)
Q Consensus 1442 ~~ 1443 (1455)
+.
T Consensus 238 ~~ 239 (252)
T PRK14239 238 PK 239 (252)
T ss_pred CC
Confidence 54
No 210
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4e-39 Score=355.86 Aligned_cols=197 Identities=30% Similarity=0.473 Sum_probs=178.7
Q ss_pred EEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcc
Q 000511 1219 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~ 1295 (1455)
|+++||+++|++.. +++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997542 3699999999999999999999999999999999999999999999999 6
Q ss_pred cEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1296 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1296 i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
++|+||+|.+|++|++||+.+....++++.+++++.+++.+.+..+ |+++.+++.+.+||+|||||++||||++++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999876555666778888888998888877 88998988889999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHH-HHHHhc-CCcEEEEeccChhhHhhhCEEEEEeCCe
Q 000511 1374 VLCLDECTANVDAQTASILQN-AISSEC-KGMTVITIAHRISTVLNMDEILILDHGH 1428 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~-~i~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1428 (1455)
+++|||||++||.++.+.+.+ .+++.. +++|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999887766 566553 4689999999999999999999999985
No 211
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-39 Score=367.24 Aligned_cols=221 Identities=29% Similarity=0.437 Sum_probs=185.7
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCC--CCh
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1289 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i~~ 1289 (1455)
|.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 56999999999964 3699999999999999999999999999999999999863 69999999999875 455
Q ss_pred HHHhcccEEEeCCCCCCCCcHHHhcCcCCC----CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000511 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp~lf~gTIreNLdp~~~----~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1455)
..+|++++|+||+|.+|+.|+++|+..... .+ ++++.++++.+++.+. +....+....+||+|||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDE-----VKDRLKKSALGLSGGQQQR 154 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchh-----hHHHHhcCCCCCCHHHHHH
Confidence 678999999999999999999999964321 11 1223334444433221 1233455667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1362 l~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
++||||++++|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 155 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 234 (250)
T PRK14240 155 LCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999887668899999999998866 89999999999999999999987
Q ss_pred cCCc
Q 000511 1441 DECS 1444 (1455)
Q Consensus 1441 ~~~s 1444 (1455)
++..
T Consensus 235 ~~~~ 238 (250)
T PRK14240 235 NPKD 238 (250)
T ss_pred CCCC
Confidence 6543
No 212
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-39 Score=374.64 Aligned_cols=221 Identities=24% Similarity=0.373 Sum_probs=185.1
Q ss_pred CccEEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCC----C-
Q 000511 1216 QGLIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----T- 1287 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~----i- 1287 (1455)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46799999999996432 259999999999999999999999999999999999999999999999999852 2
Q ss_pred ChHHHhcccEEEeCCC--CCCCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHH
Q 000511 1288 PVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQL 1361 (1455)
Q Consensus 1288 ~~~~lR~~i~~VpQdp--~lf~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQr 1361 (1455)
+...+|++++|+||+| .+|+.|+++|+.+... ...++..+. +.+.++.+|++ ...+.....||||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~~~L~~~~~~~~~~~LS~Gq~qr 158 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKLVQLPEDYVKRSPFELSGGQKRR 158 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCChhHhcCChhhCCHHHHHH
Confidence 4567888999999998 4678899999964321 122222211 22334444773 44566677899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHH
Q 000511 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1362 l~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eL 1438 (1455)
++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 159 v~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 238 (289)
T PRK13645 159 VALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEI 238 (289)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998764 37899999999998765 899999999999999999998
Q ss_pred hcc
Q 000511 1439 LQD 1441 (1455)
Q Consensus 1439 l~~ 1441 (1455)
.++
T Consensus 239 ~~~ 241 (289)
T PRK13645 239 FSN 241 (289)
T ss_pred hcC
Confidence 764
No 213
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-39 Score=368.44 Aligned_cols=221 Identities=26% Similarity=0.399 Sum_probs=184.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCCCC--hHH
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINTP--VRD 1291 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~i~--~~~ 1291 (1455)
-+++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999963 469999999999999999999999999999999999986 47999999999987653 346
Q ss_pred HhcccEEEeCCCCCCCCcHHHhcCcCC---CC--C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1292 LRGRFAVVPQSPFLFEGSLRDNLDPFH---MN--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1292 lR~~i~~VpQdp~lf~gTIreNLdp~~---~~--~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
+|++++|+||++.+|++|+++|+.+.. .. . ++++.++++..++.+. +.+.++..+.+||+|||||+
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~qrv 158 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEE-----LGDRLKDSAFELSGGQQQRL 158 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCch-----hhhHhhcChhhCCHHHHHHH
Confidence 788999999999999999999996431 11 1 1223333333333211 11245566678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++++|+||||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 238 (251)
T PRK14244 159 CIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIFKN 238 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999987678999999999999875 899999999999999999999987
Q ss_pred CCcHH
Q 000511 1442 ECSVF 1446 (1455)
Q Consensus 1442 ~~s~f 1446 (1455)
+...+
T Consensus 239 ~~~~~ 243 (251)
T PRK14244 239 PQSSK 243 (251)
T ss_pred CCChH
Confidence 65544
No 214
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=368.36 Aligned_cols=223 Identities=23% Similarity=0.375 Sum_probs=185.7
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCCC--Ch
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PV 1289 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i--~~ 1289 (1455)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 11 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 11 PQIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eeEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 36999999999963 4699999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHHhcccEEEeCCCCCCCCcHHHhcCcCC---CCChH----HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp~lf~gTIreNLdp~~---~~~d~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
..+|+.++|+||++.+|+.|+++|+.... ..+.+ ++.++++.+++.+. ++.........||||||||+
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LSgG~~qrv 163 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDE-----TSDRLKSPALSLSGGQQQRL 163 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcc-----hhhhhcCChhhCCHHHHHHH
Confidence 56788999999999999999999996421 11221 23334444433211 12334555668999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+|||||+++|+||||||||++||.++.+.+.+.|++..+++|||+|||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 164 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 243 (258)
T PRK14268 164 CIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFHN 243 (258)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999887668999999999999866 899999999999999999999876
Q ss_pred CCcHH
Q 000511 1442 ECSVF 1446 (1455)
Q Consensus 1442 ~~s~f 1446 (1455)
+...+
T Consensus 244 ~~~~~ 248 (258)
T PRK14268 244 PREKS 248 (258)
T ss_pred CCCHH
Confidence 54433
No 215
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-39 Score=367.45 Aligned_cols=226 Identities=24% Similarity=0.406 Sum_probs=188.1
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCCC--ChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i--~~~ 1290 (1455)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999963 4699999999999999999999999999999999999984 899999999998753 345
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
.+|++++++||+|.+|+.|+++|+.... ...+ +++.++++..++.+.+ +...+....+||+|||||+
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~qr~ 155 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-----KSELNKPGTRLSGGQQQRL 155 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-----HHHHhCChhhcCHHHHHHH
Confidence 6788999999999999999999997421 1111 2233344444432211 2335566778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++++|+||+|||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 156 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14262 156 CIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIVER 235 (250)
T ss_pred HHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999999999987678999999999998765 899999999999999999999876
Q ss_pred CCcHHHHHH
Q 000511 1442 ECSVFSSFV 1450 (1455)
Q Consensus 1442 ~~s~f~~l~ 1450 (1455)
+...|...+
T Consensus 236 ~~~~~~~~~ 244 (250)
T PRK14262 236 PKNKLTEEY 244 (250)
T ss_pred CCChHHHHH
Confidence 544455433
No 216
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-39 Score=367.72 Aligned_cols=221 Identities=24% Similarity=0.366 Sum_probs=185.0
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC--C---CCceEEECCEeCCC--CChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIIN--TPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~--~---~~G~I~IdG~di~~--i~~~ 1290 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5899999999964 369999999999999999999999999999999999997 3 59999999999864 4556
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCCC----CChHH----HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~~----~~d~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
.+|++++|+||+|.+|++|++||+.+... .++++ +.++++..++.+.+ .........+||||||||+
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~l~~~~~~LS~Gq~qrv 164 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-----KDRLHTQALSLSGGQQQRL 164 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hhhhhCCcccCCHHHHHHH
Confidence 78899999999999999999999964321 12222 22233333332211 2334566678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++++|+|++|||||++||.++...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 165 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 244 (259)
T PRK14274 165 CIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFSN 244 (259)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhhC
Confidence 9999999999999999999999999999999999987678999999999999875 899999999999999999999876
Q ss_pred CCcH
Q 000511 1442 ECSV 1445 (1455)
Q Consensus 1442 ~~s~ 1445 (1455)
+...
T Consensus 245 ~~~~ 248 (259)
T PRK14274 245 PDDQ 248 (259)
T ss_pred CCCH
Confidence 5443
No 217
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-39 Score=369.60 Aligned_cols=221 Identities=25% Similarity=0.361 Sum_probs=183.1
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH----hcc
Q 000511 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGR 1295 (1455)
Q Consensus 1220 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l----R~~ 1295 (1455)
.++|++.+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 56688888864 469999999999999999999999999999999999999999999999999988776543 468
Q ss_pred cEEEeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1296 FAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1296 i~~VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
++|+||++.+|+ .|++||+.... .....+.. ....+.++.+|++..+.....+||||||||++||||++++
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~ 178 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAERE-----ERAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVD 178 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999885 59999996421 11111111 1122334444665555666678999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHHH
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1447 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~ 1447 (1455)
|+||||||||++||..+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++++++...|.
T Consensus 179 p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~ 257 (269)
T cd03294 179 PDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPANDYV 257 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCcCcHHH
Confidence 99999999999999999999999998764 37999999999998865 899999999999999999999876654443
No 218
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-39 Score=369.58 Aligned_cols=219 Identities=27% Similarity=0.442 Sum_probs=183.7
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCC--CChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~~~ 1290 (1455)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 6999999999963 469999999999999999999999999999999999865 789999999999865 3445
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCCC---C-C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~~---~-~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
.+|++++|+||++.+|++|+++|+..... . . ++.+.++++..++.+. +....+....+||||||||+
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LSgGq~qrl 173 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDE-----VKDRLHSSALSLSGGQQQRL 173 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcc-----hHHHHhcCcccCCHHHHHHH
Confidence 67889999999999999999999864311 1 1 1223333433333211 12334566778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++++|+||||||||++||..+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++..+
T Consensus 174 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 253 (268)
T PRK14248 174 CIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFTS 253 (268)
T ss_pred HHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999987667899999999998765 899999999999999999999876
Q ss_pred CC
Q 000511 1442 EC 1443 (1455)
Q Consensus 1442 ~~ 1443 (1455)
+.
T Consensus 254 ~~ 255 (268)
T PRK14248 254 PK 255 (268)
T ss_pred CC
Confidence 43
No 219
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-39 Score=367.73 Aligned_cols=221 Identities=24% Similarity=0.363 Sum_probs=186.6
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCC--CC
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TP 1288 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~ 1288 (1455)
.-.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 22 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred ceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 346999999999964 369999999999999999999999999999999999987 699999999999853 45
Q ss_pred hHHHhcccEEEeCCCCCCCCcHHHhcCcCC---CCChH-----HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000511 1289 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDL-----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1455)
Q Consensus 1289 ~~~lR~~i~~VpQdp~lf~gTIreNLdp~~---~~~d~-----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1455)
...+|++++|+||+|.+|..|+++|+.+.. ..+++ .+.++++..++.+ ++....+..+..|||||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~l~~~~~~~~~~LSgGe~q 174 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-----ELKDRLHDNAYGLSGGQQQ 174 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-----hHHHHHhcCcccCCHHHHH
Confidence 567889999999999999999999997421 11221 1223333332221 2334456677789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1361 rl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 175 rv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 175 RLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999887778999999999999875 8999999999999999999998
Q ss_pred ccCC
Q 000511 1440 QDEC 1443 (1455)
Q Consensus 1440 ~~~~ 1443 (1455)
+++.
T Consensus 255 ~~~~ 258 (271)
T PRK14238 255 SNPS 258 (271)
T ss_pred cCCC
Confidence 7654
No 220
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-39 Score=366.16 Aligned_cols=222 Identities=23% Similarity=0.367 Sum_probs=184.9
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC--C---CCceEEECCEeCCCC--C
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIINT--P 1288 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~--~---~~G~I~IdG~di~~i--~ 1288 (1455)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 467999999999963 469999999999999999999999999999999999986 4 689999999999753 3
Q ss_pred hHHHhcccEEEeCCCCCCC-CcHHHhcCcC----CCCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHH
Q 000511 1289 VRDLRGRFAVVPQSPFLFE-GSLRDNLDPF----HMNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQR 1359 (1455)
Q Consensus 1289 ~~~lR~~i~~VpQdp~lf~-gTIreNLdp~----~~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQr 1359 (1455)
...+|++++|+||++.+|+ .|++||+... +..+. +++.++++.+++.+.+ +...+....+||+|||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~ 154 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEV-----KDRLKSNAMELSGGQQ 154 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hHHhhCCcCcCCHHHH
Confidence 4567889999999999998 5999999642 11111 1233333333332211 1234456678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHH
Q 000511 1360 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1360 Qrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eL 1438 (1455)
||++||||++++|++|||||||++||..+.+.+.+.|++..++.|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14256 155 QRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKI 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999865 899999999999999999999
Q ss_pred hccCCc
Q 000511 1439 LQDECS 1444 (1455)
Q Consensus 1439 l~~~~s 1444 (1455)
...+..
T Consensus 235 ~~~~~~ 240 (252)
T PRK14256 235 FTTPEK 240 (252)
T ss_pred HhCCCc
Confidence 876543
No 221
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-39 Score=377.98 Aligned_cols=222 Identities=20% Similarity=0.345 Sum_probs=182.7
Q ss_pred cEEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC----CCCceEEECCEeCCCCChHH
Q 000511 1218 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP----ICGGQILVDGLNIINTPVRD 1291 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~----~~~G~I~IdG~di~~i~~~~ 1291 (1455)
.++++|++++|+... ..+|+||||+|++||.+||+|+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 479999999997532 359999999999999999999999999999999999997 48999999999999998776
Q ss_pred Hhc----ccEEEeCCCC--CCCC-cHHHhc----CcCCCCCh----HHHHHHHHHhcHHHHHHhCCCc---hhhhcCCCC
Q 000511 1292 LRG----RFAVVPQSPF--LFEG-SLRDNL----DPFHMNDD----LKIWSVLEKCHVKEEVEAVGLE---TFVKESGIS 1353 (1455)
Q Consensus 1292 lR~----~i~~VpQdp~--lf~g-TIreNL----dp~~~~~d----~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G~~ 1353 (1455)
+|+ ++++|||+|. +.+. |+.+|+ ........ +++.++|++ +||+ ...+.....
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~---------~gL~~~~~~l~~~p~~ 153 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQ---------VGIPDPASRLDVYPHQ 153 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH---------CCCCChHHHHhCCchh
Confidence 543 6999999995 4432 665554 22211111 223333443 4553 235566778
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hhCEEEEEeCCeEE
Q 000511 1354 FSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLV 1430 (1455)
Q Consensus 1354 LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~iv 1430 (1455)
||||||||++|||||+.+|++||+||||++||..+...+.+.|++.. .+.|+|+|||+++.+. .||||+||++|+|+
T Consensus 154 LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~iv 233 (326)
T PRK11022 154 LSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVV 233 (326)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998864 3789999999999985 59999999999999
Q ss_pred EeCChhHHhccCCcHHHH
Q 000511 1431 EQGNPQTLLQDECSVFSS 1448 (1455)
Q Consensus 1431 e~G~p~eLl~~~~s~f~~ 1448 (1455)
|.|+++++++++...|.+
T Consensus 234 e~g~~~~~~~~p~hpyt~ 251 (326)
T PRK11022 234 ETGKAHDIFRAPRHPYTQ 251 (326)
T ss_pred EECCHHHHhhCCCChHHH
Confidence 999999999877655544
No 222
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=9.2e-39 Score=367.04 Aligned_cols=227 Identities=25% Similarity=0.388 Sum_probs=186.3
Q ss_pred cEEEEEEEEEecCC-------CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH
Q 000511 1218 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~ 1290 (1455)
.|+++||+++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999632 35799999999999999999999999999999999999999999999999999887654
Q ss_pred H---HhcccEEEeCCCC--CC-CCcHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHH
Q 000511 1291 D---LRGRFAVVPQSPF--LF-EGSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQR 1359 (1455)
Q Consensus 1291 ~---lR~~i~~VpQdp~--lf-~gTIreNLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQr 1359 (1455)
. +|++++|+||+|. ++ ..|+++|+... .....++ ....+.+.++.+|++ ...+.....||||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~ 156 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESE-----QKARIAELLDMVGLRSEDADKLPRQLSGGQL 156 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHcCCChhhhhCChhhCCHHHH
Confidence 3 6788999999983 44 36999998531 1111111 111233445555775 345666778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChh
Q 000511 1360 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1436 (1455)
Q Consensus 1360 Qrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~ 1436 (1455)
||++||||++++|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (265)
T TIGR02769 157 QRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVA 236 (265)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHH
Confidence 999999999999999999999999999999999999987643 7899999999999975 8999999999999999999
Q ss_pred HHhccCCcHHHHH
Q 000511 1437 TLLQDECSVFSSF 1449 (1455)
Q Consensus 1437 eLl~~~~s~f~~l 1449 (1455)
++...++...+++
T Consensus 237 ~~~~~~~~~~~~~ 249 (265)
T TIGR02769 237 QLLSFKHPAGRNL 249 (265)
T ss_pred HHcCCCCHHHHHH
Confidence 9987443233334
No 223
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-39 Score=380.59 Aligned_cols=222 Identities=27% Similarity=0.426 Sum_probs=189.6
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
..++++|++++|+. .++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++.+.+. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 36999999999963 469999999999999999999999999999999999999999999999999988765 47789
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
+||+|++.+|+. |++||+.+... .+..++.+ .+.+.++.+|++.........||||||||++|||||+++|
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P 168 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRP 168 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 99999975421 22222221 1234445557766666667789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHHH
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1447 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~ 1447 (1455)
++|+||||||+||..+.+.+.+.|++.. .+.|+|+|||+++.+.. ||||++|++|++++.|+|+++..++...|-
T Consensus 169 ~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~~~ 246 (377)
T PRK11607 169 KLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYS 246 (377)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccHHH
Confidence 9999999999999999999988877653 37899999999998765 899999999999999999999998876553
No 224
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.6e-39 Score=358.40 Aligned_cols=204 Identities=31% Similarity=0.469 Sum_probs=173.9
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000511 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1455)
Q Consensus 1220 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~V 1299 (1455)
+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 46899999975334699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred eCCCC--CCCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1300 PQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1300 pQdp~--lf~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
||+|. +++.|+++|+..... .++.+..+ ...+.++.+|++.........||||||||++|||||+++|++
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~l 155 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDI 155 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99983 677899999965311 12211111 123344555776666667778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCe
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGH 1428 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1428 (1455)
|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 156 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 156 LLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999998764 47899999999999987 99999999985
No 225
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-39 Score=364.05 Aligned_cols=217 Identities=28% Similarity=0.444 Sum_probs=186.5
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHH-Hhccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~-lR~~i 1296 (1455)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 3889999999963 46999999999999999999999999999999999999999999999999998877644 57889
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCCC----ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHMN----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~~----~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
+++||++.+|++ |++||+...... +.++. +....+.++.+|++.........||||||||++||||++++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAAN 155 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcC
Confidence 999999998885 999999754211 11111 12234556666887767777778999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
|++|||||||++||+.+.+.+.+.+++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 156 PKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999987754 48899999999987765 899999999999999999999764
No 226
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-39 Score=357.43 Aligned_cols=202 Identities=30% Similarity=0.463 Sum_probs=174.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|+. .++|+|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 579999999964 36999999999999 99999999999999999999999999999999999998776 778999999
Q ss_pred EeCCCCCCCC-cHHHhcCcCC---CCC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~---~~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
+||+|.+|.+ |++||+.... ..+ ++++.++++.. |++.........||+|||||++||||+++
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 147 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELV---------NLGDRAKKKIGSLSGGMRRRVGIAQALVG 147 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHC---------CCHHHHhCchhhCCHHHHHHHHHHHHHhc
Confidence 9999999986 9999986421 111 12334444444 44433444556799999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
+|+++||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 148 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 148 DPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999987667999999999999875 8999999999999865
No 227
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.5e-39 Score=363.35 Aligned_cols=211 Identities=26% Similarity=0.404 Sum_probs=179.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHH-HhcccE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRFA 1297 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~-lR~~i~ 1297 (1455)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 578999999964 36999999999999999999999999999999999999999999999999998877654 467899
Q ss_pred EEeCCCCCCCC-cHHHhcCcCC-CC--ChHH-HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1298 VVPQSPFLFEG-SLRDNLDPFH-MN--DDLK-IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1298 ~VpQdp~lf~g-TIreNLdp~~-~~--~d~e-i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
|+||++.+|++ |+++|+.... .. .+++ ..++++..+ +++........+||||||||++||||++++|
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~--------~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP--------VLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH--------hHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 9999996432 11 1111 122222221 2444455666689999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
+++||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999988653 7899999999999986 8999999999999999999983
No 228
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=362.00 Aligned_cols=218 Identities=25% Similarity=0.399 Sum_probs=185.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCC------CCChHHH
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII------NTPVRDL 1292 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~------~i~~~~l 1292 (1455)
++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+
T Consensus 3 l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 3 IQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 789999999964 46999999999999999999999999999999999999999999999999874 1234567
Q ss_pred hcccEEEeCCCCCCCC-cHHHhcCcC--C--CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000511 1293 RGRFAVVPQSPFLFEG-SLRDNLDPF--H--MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1293 R~~i~~VpQdp~lf~g-TIreNLdp~--~--~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1455)
|++++|+||+|.+|++ |++||+..+ . ....++.. ....+.++.+|++...+....+||||||||++||||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~lara 155 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIARA 155 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 8899999999999976 999999631 1 11222211 123455556678777777778999999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCC
Q 000511 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1368 lLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~ 1443 (1455)
++++|+|+||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+...
T Consensus 156 l~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~~ 233 (242)
T PRK11124 156 LMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQPQT 233 (242)
T ss_pred HhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcCccc
Confidence 999999999999999999999999999998764 47999999999999875 89999999999999999999865433
No 229
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-39 Score=369.66 Aligned_cols=218 Identities=26% Similarity=0.415 Sum_probs=185.2
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 3 ~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 3 LIETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred eEEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 37899999999633 35999999999999999999999999999999999999999999999999998878888899999
Q ss_pred EEeCCC--CCCCCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1298 VVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1298 ~VpQdp--~lf~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
|+||+| .+|+.|+++|+.... ..+.++..+ ...+.++.+|+..........||+|||||++|||||+.+|
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p 156 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH-----RVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEP 156 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 477889999996422 122222111 1123333345555555566789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
++|||||||++||+.+.+.+.+.+++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 157 ~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 157 QVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999987653 789999999999985 5899999999999999999999864
No 230
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-39 Score=368.47 Aligned_cols=217 Identities=28% Similarity=0.470 Sum_probs=185.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCC-hHHHhcccE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLRGRFA 1297 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~-~~~lR~~i~ 1297 (1455)
++++|++++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999633 45999999999999999999999999999999999999999999999999998765 467788999
Q ss_pred EEeCCCC--CCCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1298 VVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1298 ~VpQdp~--lf~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
|+||+|. +++.|+++|+.+... .+..+..+ .+.+.++.+|++.........||+|||||++||||++++|
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRK-----RVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEP 155 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999985 567899999975421 12222111 1223344456766666677789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||||||++||+.+...+.+.|++.. +++|||++||+++.+..||||++|++|++++.|+++++...
T Consensus 156 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 156 ECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999998754 48999999999999988999999999999999999998764
No 231
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-39 Score=359.84 Aligned_cols=208 Identities=28% Similarity=0.441 Sum_probs=177.2
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREP-REVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcCh-HHHhhcEEE
Confidence 578999999964 46999999999999999999999999999999999999999999999999987643 567889999
Q ss_pred EeCCCCCCCC-cHHHhcCcCC---CCC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~---~~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
+||++.++++ |+++|+.... ..+ ++++.++++ .+|++.........||||||||++||||++.
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~---------~~~l~~~~~~~~~~LS~G~~qr~~la~al~~ 148 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLD---------FVGLLEAADRLVKTYSGGMRRRLEIARSLVH 148 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHH---------HcCCHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 9999998875 9999996421 111 122333333 3455544445556899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHH
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eL 1438 (1455)
+|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 149 RPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999999987642 7899999999999876 899999999999999998875
No 232
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-39 Score=365.21 Aligned_cols=220 Identities=27% Similarity=0.383 Sum_probs=186.3
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCC-----CceEEECCEeCCCC--Ch
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIINT--PV 1289 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~-----~G~I~IdG~di~~i--~~ 1289 (1455)
+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 3 ~~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 3 PKIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred ceEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 36899999999963 46999999999999999999999999999999999999997 69999999998653 45
Q ss_pred HHHhcccEEEeCCCCCCCCcHHHhcCcCCC----CCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000511 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp~lf~gTIreNLdp~~~----~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1455)
..+|++++|+||+|.+|+.|++||+.+... ... +.+.++++..++++.+ ....+..+.+||+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LS~Gq~qr 155 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEV-----KDNLHKSGLALSGGQQQR 155 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhh-----hhHhhCCcccCCHHHHHH
Confidence 677899999999999999999999975321 111 2233344444443322 233556677899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1362 l~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
++||||++++|++|||||||++||..+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 235 (251)
T PRK14249 156 LCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFS 235 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999887667999999999999887 69999999999999999999977
Q ss_pred cCC
Q 000511 1441 DEC 1443 (1455)
Q Consensus 1441 ~~~ 1443 (1455)
++.
T Consensus 236 ~~~ 238 (251)
T PRK14249 236 RPR 238 (251)
T ss_pred CCC
Confidence 543
No 233
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-39 Score=362.69 Aligned_cols=217 Identities=24% Similarity=0.410 Sum_probs=182.0
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHH-Hhccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~-lR~~i 1296 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... .|+.+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999963 46999999999999999999999999999999999999999999999999998887654 67889
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
+|+||++.+|++ |+++|+..... .+..+..+. +.+.++.+ +++.........||+|||||++||||++++|+
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQER-----IKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPR 157 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHH-----HHHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhCCC
Confidence 999999999985 99999975321 122222211 11222222 24333444556899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||||++|++|++++.|+++++..+
T Consensus 158 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 158 LLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 999999999999999999999998764 48999999999997755 899999999999999999999753
No 234
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-39 Score=364.59 Aligned_cols=218 Identities=28% Similarity=0.410 Sum_probs=184.8
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCCC--ChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i--~~~ 1290 (1455)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999963 4699999999999999999999999999999999999875 799999999999653 345
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCCC---C-Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~~---~-~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
.+|++++|+||++.+|+.|+++|+.+... . +. +++.++++.+++.+.+ ....+.....||+|||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv 156 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEV-----KDDLKKSALKLSGGQQQRL 156 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhh-----hhHhhCCcccCCHHHHHHH
Confidence 67889999999999999999999974321 1 11 2233444444432211 2234556678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++++|+||||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|+++++..+
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14270 157 CIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIFLE 236 (251)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999987767899999999999876 899999999999999999999875
Q ss_pred C
Q 000511 1442 E 1442 (1455)
Q Consensus 1442 ~ 1442 (1455)
+
T Consensus 237 ~ 237 (251)
T PRK14270 237 P 237 (251)
T ss_pred C
Confidence 4
No 235
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-39 Score=367.29 Aligned_cols=221 Identities=24% Similarity=0.355 Sum_probs=186.5
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCC--CCh
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1289 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i~~ 1289 (1455)
+.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999964 4699999999999999999999999999999999999985 48999999999864 445
Q ss_pred HHHhcccEEEeCCCCCCCCcHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000511 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp~lf~gTIreNLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1455)
..+|++++|+||+|.+|+.|++||+.+.. ...+ +.+.++++.+++++.+ ....+..+..||+|||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LS~G~~qr 158 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-----KDKLNKSALGLSGGQQQR 158 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-----hhHhcCCcccCCHHHHHH
Confidence 67888999999999999999999996421 1121 2334555555554322 223445566899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEe-----CCeEEEeCCh
Q 000511 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD-----HGHLVEQGNP 1435 (1455)
Q Consensus 1362 l~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~-----~G~ive~G~p 1435 (1455)
++||||++++|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||++++|+ +|++++.|++
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 159 LCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGVT 238 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCCH
Confidence 99999999999999999999999999999999999987677999999999999876 89999997 5999999999
Q ss_pred hHHhccCCc
Q 000511 1436 QTLLQDECS 1444 (1455)
Q Consensus 1436 ~eLl~~~~s 1444 (1455)
+++.+++..
T Consensus 239 ~~~~~~~~~ 247 (259)
T PRK14260 239 TQIFSNPLD 247 (259)
T ss_pred HHHhcCCCC
Confidence 999876543
No 236
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-39 Score=370.57 Aligned_cols=219 Identities=28% Similarity=0.486 Sum_probs=184.3
Q ss_pred cEEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCC----ChH
Q 000511 1218 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i----~~~ 1290 (1455)
.|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997422 4699999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhcccEEEeCCC--CCCCCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHHHH
Q 000511 1291 DLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICL 1364 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp--~lf~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~L 1364 (1455)
..|++++|+||+| .+|+.|++||+.+.. ..+.++..+ ...+.++.+|++. .......+||||||||++|
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~l 156 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKVGLSEDLISKSPFELSGGQMRRVAI 156 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCChhHhhCCcccCCHHHHHHHHH
Confidence 6788999999998 578889999996421 122222211 1234455557763 4566677899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1365 ARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
|||++++|++|||||||++||+++.+.+.+.|++.. ++.|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 157 aral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13641 157 AGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFSD 235 (287)
T ss_pred HHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998764 47899999999999864 899999999999999999998764
No 237
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=367.25 Aligned_cols=221 Identities=29% Similarity=0.410 Sum_probs=187.1
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCC--CC
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TP 1288 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i~ 1288 (1455)
.+.++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 23 ~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 23 QTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred CcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 457999999999963 3699999999999999999999999999999999999984 89999999999875 44
Q ss_pred hHHHhcccEEEeCCCCCCCCcHHHhcCcCCC----CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000511 1289 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1455)
Q Consensus 1289 ~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~----~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1455)
...+|++++|+||++.+|++|+++|+.+... .. ++++.++++.+++.+.+ .+..+..+.+||+||||
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~q 175 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEV-----KDRLHENAFGLSGGQQQ 175 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhH-----HHHhhCCcccCCHHHHH
Confidence 5678899999999999999999999964311 11 12244444444433221 13455667789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1361 rl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
|++||||++++|+|+||||||++||..+.+.+.+.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 176 rv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 176 RLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTLF 255 (272)
T ss_pred HHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHHh
Confidence 999999999999999999999999999999999999987678999999999999865 8999999999999999999998
Q ss_pred ccCC
Q 000511 1440 QDEC 1443 (1455)
Q Consensus 1440 ~~~~ 1443 (1455)
+++.
T Consensus 256 ~~~~ 259 (272)
T PRK14236 256 TSPA 259 (272)
T ss_pred cCCC
Confidence 7543
No 238
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.7e-38 Score=373.35 Aligned_cols=226 Identities=25% Similarity=0.402 Sum_probs=185.2
Q ss_pred cEEEEEEEEEecC--CCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCC---CceEEECCEeCCCCChHHH
Q 000511 1218 LIEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC---GGQILVDGLNIINTPVRDL 1292 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~---~G~I~IdG~di~~i~~~~l 1292 (1455)
.++++|++++|+. +..++|+||||+|++||++||+|+||||||||+++|+|+++|. +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 6899999999963 2246999999999999999999999999999999999999996 9999999999999987765
Q ss_pred h----cccEEEeCCC--CCCC-CcHHHhcC----cCCCCChHHHHHHHHHhcHHHHHHhCCCc---hhhhcCCCCCChhH
Q 000511 1293 R----GRFAVVPQSP--FLFE-GSLRDNLD----PFHMNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVGQ 1358 (1455)
Q Consensus 1293 R----~~i~~VpQdp--~lf~-gTIreNLd----p~~~~~d~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G~~LSgGQ 1358 (1455)
| ++|+|||||| .+++ -|+.+|+. .....+.++..+ ...+.++.+|++ ..++..+..|||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~-----~~~~~L~~vgL~~~~~~~~~~p~~LSgG~ 166 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFE-----ESVRMLDAVKMPEARKRMKMYPHEFSGGM 166 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCCChHHHhcCCcccCCHHH
Confidence 4 4799999999 4555 37777763 222222222111 112223333553 23466777899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCCh
Q 000511 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1359 rQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p 1435 (1455)
|||++|||||+.+|++||+|||||+||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|.|++
T Consensus 167 ~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~ 246 (330)
T PRK09473 167 RQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNA 246 (330)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987643 7899999999999975 899999999999999999
Q ss_pred hHHhccCCcHHHH
Q 000511 1436 QTLLQDECSVFSS 1448 (1455)
Q Consensus 1436 ~eLl~~~~s~f~~ 1448 (1455)
+++.+++...|.+
T Consensus 247 ~~i~~~p~~pyt~ 259 (330)
T PRK09473 247 RDVFYQPSHPYSI 259 (330)
T ss_pred HHHHhCCCCHHHH
Confidence 9999877655555
No 239
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=5.4e-39 Score=361.51 Aligned_cols=211 Identities=26% Similarity=0.413 Sum_probs=176.2
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh---HHHh
Q 000511 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLR 1293 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~---~~lR 1293 (1455)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 369999999999999999999999999999999999999999999999999988774 5778
Q ss_pred cccEEEeCCC--CCC-CCcHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000511 1294 GRFAVVPQSP--FLF-EGSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1365 (1455)
Q Consensus 1294 ~~i~~VpQdp--~lf-~gTIreNLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LA 1365 (1455)
++++|+||+| .++ ..|+++|+... ....+++..+ .+ ..+.++.+|++ ...+....+||||||||++||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~---~~-~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~la 157 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARK---EA-VLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIA 157 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHH---HH-HHHHHHHCCCChhHhhCCchhcCHHHHHHHHHH
Confidence 8999999999 344 46999998532 1111111111 10 12344555774 456777788999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hhCEEEEEeCCeEEEeC
Q 000511 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1366 RAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G 1433 (1455)
||++++|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+. .||+|++|++|++++.|
T Consensus 158 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 158 RALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999988754 789999999999988 48999999999998765
No 240
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-39 Score=364.76 Aligned_cols=222 Identities=23% Similarity=0.388 Sum_probs=188.4
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCC--CChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~~~ 1290 (1455)
.++++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.+++. .+..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999963 469999999999999999999999999999999999875 489999999999875 3466
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCC---CC-Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~---~~-~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
.+|++++|+||+|.+|++|+++|+.... .. +. +++.++++.+++.+.+. ...+..+.+||+|||||+
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-----~~~~~~~~~LS~Gq~qrv 155 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-----DKLDKSALGLSGGQQQRL 155 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-----HHHhCCcccCCHHHHHHH
Confidence 7899999999999999999999997431 11 11 23444556666544332 223555678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++++|+||+|||||++||..+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 156 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14266 156 CIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIFIN 235 (250)
T ss_pred HHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988778999999999998877 799999999999999999999877
Q ss_pred CCcHH
Q 000511 1442 ECSVF 1446 (1455)
Q Consensus 1442 ~~s~f 1446 (1455)
+.+.+
T Consensus 236 ~~~~~ 240 (250)
T PRK14266 236 PKDKR 240 (250)
T ss_pred CCChH
Confidence 65544
No 241
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-39 Score=365.25 Aligned_cols=226 Identities=25% Similarity=0.389 Sum_probs=188.9
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCCC--ChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i--~~~ 1290 (1455)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 5899999999963 4699999999999999999999999999999999999763 489999999999876 456
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCCCC----C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMN----D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~~~----~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
..|++++|+||+|.+|++|++||+.+.... . ++++.++++.+++.+. +.+..+..+.+||+|||||+
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qrv 158 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDE-----VKDRLHDSALSLSGGQQQRL 158 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchh-----hHHHhhcChhhCCHHHHHHH
Confidence 778899999999999999999999753211 1 1123334444433221 22345667778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++.+|+++||||||++||.++.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 159 ~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 238 (253)
T PRK14261 159 CIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIFEN 238 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHHhC
Confidence 9999999999999999999999999999999999987667999999999999975 899999999999999999999876
Q ss_pred CCcHHHHHH
Q 000511 1442 ECSVFSSFV 1450 (1455)
Q Consensus 1442 ~~s~f~~l~ 1450 (1455)
+...+.+.+
T Consensus 239 ~~~~~~~~~ 247 (253)
T PRK14261 239 PHEELTENY 247 (253)
T ss_pred CCcHHHHHH
Confidence 544444433
No 242
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5e-39 Score=355.36 Aligned_cols=198 Identities=27% Similarity=0.414 Sum_probs=168.7
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000511 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1455)
Q Consensus 1220 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~V 1299 (1455)
+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 469999999999999999999999999999999999999999999999999864 4567889999
Q ss_pred eCCC--CCCCCcHHHhcCcCCC-C--ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1300 PQSP--FLFEGSLRDNLDPFHM-N--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1300 pQdp--~lf~gTIreNLdp~~~-~--~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
||+| .+|+.|++||+..... . .++++.++++.+ |++.........||||||||++||||++++|++
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 147 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDL---------DLYALKERHPLSLSGGQKQRLAIAAALLSGKDL 147 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHc---------CCchhcCCCchhCCHHHHHHHHHHHHHHhCCCE
Confidence 9998 4678899999975422 1 123444455544 444444455567999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhHhh-hCEEEEEeCCeEE
Q 000511 1375 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLN-MDEILILDHGHLV 1430 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~-~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv 1430 (1455)
|+|||||++||+++.+.+.+.|++. .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 148 LIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999876 357899999999999875 8999999999985
No 243
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=368.64 Aligned_cols=220 Identities=26% Similarity=0.434 Sum_probs=185.2
Q ss_pred cEEEEEEEEEecCC----CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCC-hHHH
Q 000511 1218 LIEFQNVTMRYKPS----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDL 1292 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~----~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~-~~~l 1292 (1455)
.++++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 58999999999742 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcccEEEeCCCC--CCCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000511 1293 RGRFAVVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1293 R~~i~~VpQdp~--lf~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1455)
|++++|+||+|. +|..|+++|+.+... .+..+..+ .+.+.++.+|++.........||+|||||++||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~lara 158 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRE-----RVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGI 158 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHH-----HHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHH
Confidence 899999999984 676799999965321 12221111 12233333456555556667899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1368 lLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
++++|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..||||++|++|++++.|+++++.++.
T Consensus 159 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 235 (280)
T PRK13633 159 LAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKEV 235 (280)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcCh
Confidence 999999999999999999999999999998764 389999999999999889999999999999999999997643
No 244
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=365.05 Aligned_cols=219 Identities=24% Similarity=0.361 Sum_probs=186.6
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCC--CChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~~~ 1290 (1455)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 5899999999964 369999999999999999999999999999999999986 479999999999853 4566
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCCC---C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1364 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~~---~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1364 (1455)
.+|++++++||++.+|+.|+++|+.+... . .++++.++++.+++++.+. ...+..+.+||||||||++|
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-----~~~~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-----DKLKQSGLSLSGGQQQRLCI 162 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-----HHhcCCcccCCHHHHHHHHH
Confidence 78899999999999998999999975321 1 1233445556666544332 23455667899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEe---------CCeEEEeCC
Q 000511 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD---------HGHLVEQGN 1434 (1455)
Q Consensus 1365 ARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~---------~G~ive~G~ 1434 (1455)
|||++++|+||||||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||||++|+ +|++++.|+
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~ 242 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEFDR 242 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEeCC
Confidence 99999999999999999999999999999999987767899999999998865 79999998 899999999
Q ss_pred hhHHhccCC
Q 000511 1435 PQTLLQDEC 1443 (1455)
Q Consensus 1435 p~eLl~~~~ 1443 (1455)
++|+.+++.
T Consensus 243 ~~~~~~~~~ 251 (264)
T PRK14243 243 TEKIFNSPQ 251 (264)
T ss_pred HHHHHhCCC
Confidence 999987654
No 245
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-38 Score=362.76 Aligned_cols=219 Identities=28% Similarity=0.417 Sum_probs=186.5
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCCCC-hHH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTP-VRD 1291 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i~-~~~ 1291 (1455)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 6899999999963 4699999999999999999999999999999999999986 6999999999998763 456
Q ss_pred HhcccEEEeCCCCCCCCcHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCc----hhhhcCCCCCChhHHHHHH
Q 000511 1292 LRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQLIC 1363 (1455)
Q Consensus 1292 lR~~i~~VpQdp~lf~gTIreNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLd----t~v~e~G~~LSgGQrQrl~ 1363 (1455)
+|++++|+||+|.+|+.|+++|+.... ..+++++.+.. .+.++.+|++ +.+.....+||||||||++
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~ 173 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLC 173 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHHHH
Confidence 788999999999999999999997431 12333332211 2233333443 3456667789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1364 LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
||||++++|++|||||||++||..+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.+.+
T Consensus 174 LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 253 (276)
T PRK14271 174 LARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSP 253 (276)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999999887667899999999999876 8999999999999999999998765
Q ss_pred C
Q 000511 1443 C 1443 (1455)
Q Consensus 1443 ~ 1443 (1455)
.
T Consensus 254 ~ 254 (276)
T PRK14271 254 K 254 (276)
T ss_pred C
Confidence 4
No 246
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=8.3e-39 Score=373.97 Aligned_cols=216 Identities=28% Similarity=0.397 Sum_probs=183.2
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999964 3699999999999999999999999999999999999999999999999998764 356789999
Q ss_pred EEeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1298 VVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1298 ~VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
|+||++.+++ .|++||+..+. ..++.+..+. +.+.++.+|++.........||||||||++|||||+++|+
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~ 155 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQ 155 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999886 59999996321 1222222221 1223333466555555566899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 156 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 156 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999998764 47899999999999875 899999999999999999999754
No 247
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=367.89 Aligned_cols=220 Identities=25% Similarity=0.409 Sum_probs=184.7
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCC--CCh
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPV 1289 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~~ 1289 (1455)
..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 38 ~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 46899999999964 369999999999999999999999999999999999997 689999999999865 345
Q ss_pred HHHhcccEEEeCCCCCCCCcHHHhcCcCCC---C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000511 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp~lf~gTIreNLdp~~~---~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1455)
..+|++++|+||++.+|++|+++|+..... . .++++.++++..++.+.+ ....+....+||||||||++
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LSgGe~qrv~ 190 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEV-----KDQLDSSGLDLSGGQQQRLC 190 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchh-----HHHHhCCcccCCHHHHHHHH
Confidence 677899999999999999999999964211 1 122344444444332111 12345666789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEE-EEeCCeEEEeCChhHHhcc
Q 000511 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEIL-ILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1364 LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~-vl~~G~ive~G~p~eLl~~ 1441 (1455)
|||||+++|+||||||||++||.++.+.+.+.|++..+++|||++||+++.+.. |||++ +|++|+|++.|+++++.++
T Consensus 191 LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~~~ 270 (285)
T PRK14254 191 IARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIFEN 270 (285)
T ss_pred HHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999988777899999999999876 89975 5799999999999999875
Q ss_pred CC
Q 000511 1442 EC 1443 (1455)
Q Consensus 1442 ~~ 1443 (1455)
+.
T Consensus 271 ~~ 272 (285)
T PRK14254 271 PE 272 (285)
T ss_pred cC
Confidence 43
No 248
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-39 Score=359.64 Aligned_cols=207 Identities=30% Similarity=0.381 Sum_probs=173.5
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999996421 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEeCCCCCCC-CcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1297 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1297 ~~VpQdp~lf~-gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
+|+||+|.+|+ .|++||+..... ....+. .....+.++.+|++........+||||||||++||||++++|
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p 150 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEA-----RERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDP 150 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999987 699999864311 111111 111233444456665566666789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEe--CCeEEEeCCh
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILD--HGHLVEQGNP 1435 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~--~G~ive~G~p 1435 (1455)
+++||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|+ +|+++|.++.
T Consensus 151 ~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 151 DVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999998763 37899999999998765 89999999 7999998764
No 249
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=365.77 Aligned_cols=223 Identities=23% Similarity=0.343 Sum_probs=190.3
Q ss_pred CCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCC--
Q 000511 1213 WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII-- 1285 (1455)
Q Consensus 1213 wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~-- 1285 (1455)
-|..+.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 11 ~~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~ 88 (265)
T PRK14252 11 SPTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNIL 88 (265)
T ss_pred cCCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccc
Confidence 456788999999999964 3699999999999999999999999999999999999975 7999999998874
Q ss_pred --CCChHHHhcccEEEeCCCCCCCCcHHHhcCcCCC---C-----ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCC
Q 000511 1286 --NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFS 1355 (1455)
Q Consensus 1286 --~i~~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~---~-----~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LS 1355 (1455)
......+|++++|+||+|.+|++|++||+..... . .++++.++++.+++.+ ++....+.....||
T Consensus 89 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS 163 (265)
T PRK14252 89 SPEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-----EVKDRLGDLAFNLS 163 (265)
T ss_pred ccccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-----hhhHHHhCCcccCC
Confidence 3345678899999999999999999999964311 1 1244555666555432 22344556667899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCC
Q 000511 1356 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1434 (1455)
Q Consensus 1356 gGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1434 (1455)
+|||||++||||++++|+++||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999987667899999999999975 89999999999999999
Q ss_pred hhHHhccC
Q 000511 1435 PQTLLQDE 1442 (1455)
Q Consensus 1435 p~eLl~~~ 1442 (1455)
++++..++
T Consensus 244 ~~~~~~~~ 251 (265)
T PRK14252 244 TDTIFIKP 251 (265)
T ss_pred HHHHHhCC
Confidence 99998654
No 250
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=6.9e-39 Score=356.66 Aligned_cols=206 Identities=27% Similarity=0.414 Sum_probs=174.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++|
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999964 3699999999999999999999999999999999999999999999999999776543 568999
Q ss_pred EeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||++.+|. .|++||+.... ....++..+ .+.+.++.+|++.........||||||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 151 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKV 151 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 59999996531 112222111 122334445666666666778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
++|||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 152 FLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999998764 37899999999999876 8999999999999876
No 251
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.5e-38 Score=359.42 Aligned_cols=215 Identities=28% Similarity=0.410 Sum_probs=182.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|+. +++|+|+||+|.+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++|
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999974 369999999999999999999999999999999999999999999999999987653 4788999
Q ss_pred EeCCCCCCCC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||+|.+|++ |++||+..... .+..+. ...+.+.++.+|+.........+||+||+||++||||++++|++
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~l 151 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKI-----KARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQV 151 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHH-----HHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999986 99999964321 111111 11223445555665445556678999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1375 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
+||||||++||.++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++++.+
T Consensus 152 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~ 222 (237)
T TIGR00968 152 LLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDHP 222 (237)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcCC
Confidence 999999999999999999999987643 7999999999999866 8999999999999999999998654
No 252
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=379.28 Aligned_cols=208 Identities=27% Similarity=0.402 Sum_probs=176.5
Q ss_pred cceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH----hcccEEEeCCCCCCCC-
Q 000511 1234 AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGRFAVVPQSPFLFEG- 1308 (1455)
Q Consensus 1234 ~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l----R~~i~~VpQdp~lf~g- 1308 (1455)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.|+.+.+...+ |++++|+||++.+|+.
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 47999999999999999999999999999999999999999999999999998877654 4689999999999975
Q ss_pred cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCC
Q 000511 1309 SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVD 1385 (1455)
Q Consensus 1309 TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD 1385 (1455)
|++||+.+... .+.++..+ ...+.++.+||+........+||||||||++|||||+.+|+|||||||||+||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD 196 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERRE-----KALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALD 196 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCC
Confidence 99999975321 12222111 12334444567666666677899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHH
Q 000511 1386 AQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1446 (1455)
Q Consensus 1386 ~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f 1446 (1455)
+.+.+.+++.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+|++++.++...|
T Consensus 197 ~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 197 PLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred HHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999998764 48899999999999865 89999999999999999999988765433
No 253
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3e-38 Score=361.66 Aligned_cols=225 Identities=23% Similarity=0.386 Sum_probs=188.1
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEe-----CCCCChHH-
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN-----IINTPVRD- 1291 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~d-----i~~i~~~~- 1291 (1455)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5899999999964 469999999999999999999999999999999999999999999999999 87776654
Q ss_pred ---HhcccEEEeCCCC--CCC-CcHHHhcCc----CCCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000511 1292 ---LRGRFAVVPQSPF--LFE-GSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1360 (1455)
Q Consensus 1292 ---lR~~i~~VpQdp~--lf~-gTIreNLdp----~~~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQ 1360 (1455)
.|+.++|+||++. ++. .|+++|+.. .......++.+ ...+.++.+|++ +..+..+.+|||||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LS~Gq~q 158 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERVEIDAARIDDLPTTFSGGMQQ 158 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHcCCChhHHhCCCccCCHHHHH
Confidence 3567999999984 343 488888742 11111112211 234566666886 4677888899999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhH
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1437 (1455)
Q Consensus 1361 rl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~e 1437 (1455)
|++||||++++|+||||||||++||+++.+.+.+.|++..+ +.|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 159 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 238 (258)
T PRK11701 159 RLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQ 238 (258)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999975 89999999999999999999
Q ss_pred HhccCCcHHHHH
Q 000511 1438 LLQDECSVFSSF 1449 (1455)
Q Consensus 1438 Ll~~~~s~f~~l 1449 (1455)
+..++...|.+.
T Consensus 239 ~~~~~~~~~~~~ 250 (258)
T PRK11701 239 VLDDPQHPYTQL 250 (258)
T ss_pred HhcCCCCHHHHH
Confidence 987665455443
No 254
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.1e-38 Score=375.61 Aligned_cols=216 Identities=28% Similarity=0.425 Sum_probs=184.0
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+ ...|++++
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999964 36999999999999999999999999999999999999999999999999997654 56789999
Q ss_pred EEeCCCCCCC-CcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1298 VVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1298 ~VpQdp~lf~-gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
|+||++.++. .|++||+..+.. .+..+..+. ..+.++.+|++........+||+|||||++|||||+.+|+
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~ 192 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDPQ 192 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999875 599999975321 122222211 1233333466555555556899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 193 lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 193 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999998864 48999999999999976 999999999999999999999764
No 255
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.2e-38 Score=371.95 Aligned_cols=215 Identities=27% Similarity=0.386 Sum_probs=187.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|++ ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.. +...+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999963 469999999999999999999999999999999999999999999999999977 44678899999
Q ss_pred EeCCCCCCCC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||+|.+|++ |++||+.+... ...++..+ ...+.++.+|++...+....+||+|||||++||||++++|++
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKV 154 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999987 99999964321 12222111 123445555777767777778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
|+|||||++||+++.+.+++.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 155 liLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 155 LILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999987778999999999999876 899999999999999999999764
No 256
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=5.1e-39 Score=356.24 Aligned_cols=202 Identities=28% Similarity=0.411 Sum_probs=174.0
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++... ..+|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999953 4699999999999999999999999999999999999999999999999998764 567889999
Q ss_pred EeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||++.+|+ .|++||+.+.. ..+++++.++++..++. .........||||||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~---------~~~~~~~~~LS~G~~qrv~la~al~~~p~l 147 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLK---------DSAKKKVKGFSLGMKQRLGIALALLGNPDL 147 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCH---------HHHhhhHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998875 69999996532 12344555555555544 334445567999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
+||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 148 LILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998764 47899999999999875 8999999999999865
No 257
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=364.46 Aligned_cols=216 Identities=25% Similarity=0.403 Sum_probs=184.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999963 469999999999999999999999999999999999999999999999999988888888889999
Q ss_pred EeCCCCCCCC-cHHHhcCcCCC-----CC--hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFHM-----ND--DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~~-----~~--d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
+||++.++++ |+++|+++... .. +.+. .....+.++.+|++.........||||||||++||||+++
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~ 155 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAED-----NARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQ 155 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHH-----HHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhc
Confidence 9999998877 99999975311 00 0110 1112223333456555566677899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 156 ~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 156 DTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 999999999999999999999999998764 47899999999999875 899999999999999999998753
No 258
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=366.03 Aligned_cols=213 Identities=27% Similarity=0.402 Sum_probs=183.8
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999963 36999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEeCCCCCCCC-cHHHhcCcCCC--------C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000511 1298 VVPQSPFLFEG-SLRDNLDPFHM--------N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1455)
Q Consensus 1298 ~VpQdp~lf~g-TIreNLdp~~~--------~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1455)
|+||++.++.+ |+++|+..... . .++++.++++.+ |++........+||||||||++||
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgG~~qrv~la 159 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLV---------GLKPLAHRLVDSLSGGERQRAWIA 159 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc---------CCHHHhcCCcccCCHHHHHHHHHH
Confidence 99999877665 99999974311 0 112334444444 444444445568999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1366 RAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
||++.+|+||||||||++||..+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 160 ral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~~ 238 (265)
T PRK10575 160 MLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMRG 238 (265)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcCH
Confidence 99999999999999999999999999999998764 37999999999999865 899999999999999999998753
No 259
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.1e-38 Score=342.59 Aligned_cols=172 Identities=35% Similarity=0.591 Sum_probs=162.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|+....++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.+.+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000511 1299 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1455)
Q Consensus 1299 VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLD 1378 (1455)
++|+|.+|++|++||+ ||+|||||++||||++++|++||||
T Consensus 81 ~~q~~~~~~~tv~~~l---------------------------------------LS~G~~qrv~la~al~~~p~~lllD 121 (173)
T cd03246 81 LPQDDELFSGSIAENI---------------------------------------LSGGQRQRLGLARALYGNPRILVLD 121 (173)
T ss_pred ECCCCccccCcHHHHC---------------------------------------cCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999998 9999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhhCEEEEEeCCeE
Q 000511 1379 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHL 1429 (1455)
Q Consensus 1379 EaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~i 1429 (1455)
|||++||+.+.+.+.+.|++.. +++|+|+++|+++.+..||+|++|++|++
T Consensus 122 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 122 EPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred CCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 9999999999999999998764 47899999999999988999999999975
No 260
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=7.7e-39 Score=356.60 Aligned_cols=205 Identities=31% Similarity=0.391 Sum_probs=171.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh---HHHhcc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~---~~lR~~ 1295 (1455)
++++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 469999999999999999999999999999999999999999999999999987754 357889
Q ss_pred cEEEeCCCCCCCC-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1296 FAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1296 i~~VpQdp~lf~g-TIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
++++||+|.+|++ |++||+.... ..+.++..+ .+.+.++.+|++........+||+|||||++||||++++
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 154 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK-----RVPAALELVGLSHKHRALPAELSGGEQQRVAIARAIVNS 154 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHHcC
Confidence 9999999999985 9999996431 112111111 122333444555555555668999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeE
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1429 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1429 (1455)
|+|+||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 155 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 155 PTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999998763 57999999999999986 899999999974
No 261
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-38 Score=365.51 Aligned_cols=217 Identities=26% Similarity=0.433 Sum_probs=182.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCC--CChHHHhccc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRF 1296 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~--i~~~~lR~~i 1296 (1455)
|+++||+++|+. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 2 l~~~~l~~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPD-GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 789999999963 3469999999999999999999999999999999999999999999999999853 3345678999
Q ss_pred EEEeCCC--CCCCCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1297 AVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1297 ~~VpQdp--~lf~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
+|+||+| .+|+.|++||+.... ..+.++..+ ...+.++.+|++.........||||||||++||||++++
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~laral~~~ 155 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK-----RVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMK 155 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998 478899999996421 122222111 122334444555444555668999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++++++.
T Consensus 156 p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 156 PEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999998764 47899999999999875 899999999999999999998764
No 262
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=366.18 Aligned_cols=217 Identities=24% Similarity=0.352 Sum_probs=181.2
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCC--CCChHHHhccc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--NTPVRDLRGRF 1296 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~--~i~~~~lR~~i 1296 (1455)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 689999999963 46999999999999999999999999999999999999999999999999985 34456778899
Q ss_pred EEEeCCCC--CCCCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1297 AVVPQSPF--LFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1297 ~~VpQdp~--lf~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
+|+||+|. ++..|+.+|+.... ..++++..+ .+.+.++.+|++.........||||||||++|||||+.+
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~ 154 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITR-----RVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQ 154 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcC
Confidence 99999985 57789999986421 112222211 112233333554444555668999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 155 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (271)
T PRK13638 155 ARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFACT 227 (271)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCh
Confidence 99999999999999999999999998764 47899999999999865 8999999999999999999987643
No 263
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=362.71 Aligned_cols=220 Identities=23% Similarity=0.366 Sum_probs=186.9
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH-hccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l-R~~i 1296 (1455)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5899999999963 469999999999999999999999999999999999999999999999999988876554 4569
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCC-----------CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHM-----------ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~-----------~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1455)
+|+||+|.+|++ |+++|+.+... .. +.+..+. .....+.++.+|++...+....+|||||||
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gl~~~~~~~~~~LS~G~~q 160 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEA--LDRAATWLERVGLLEHANRQAGNLAYGQQR 160 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHH--HHHHHHHHHhCChhhhhhCChhhCCHHHHH
Confidence 999999999986 99999975311 00 0000011 112334555568877777888899999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhH
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1437 (1455)
Q Consensus 1361 rl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~e 1437 (1455)
|++||||++++|++|||||||++||..+.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|++++.|++++
T Consensus 161 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 240 (255)
T PRK11300 161 RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEE 240 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999876 89999999999999999999
Q ss_pred Hhcc
Q 000511 1438 LLQD 1441 (1455)
Q Consensus 1438 Ll~~ 1441 (1455)
+.++
T Consensus 241 ~~~~ 244 (255)
T PRK11300 241 IRNN 244 (255)
T ss_pred HhhC
Confidence 8764
No 264
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=362.38 Aligned_cols=224 Identities=26% Similarity=0.410 Sum_probs=185.0
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCC-----CceEEECCEeCCC--CChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIIN--TPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~-----~G~I~IdG~di~~--i~~~ 1290 (1455)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 4789999999963 46999999999999999999999999999999999999874 8999999999875 3455
Q ss_pred HHhcccEEEeCCCCCCCC-cHHHhcCcCC---C-CChHHHHH----HHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---M-NDDLKIWS----VLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~g-TIreNLdp~~---~-~~d~ei~~----aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1455)
.+|++++|+||+|.+|++ |++||+.... . ..+++..+ .++..++++. +.........+||||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDE-----VKDRLKTPATGLSGGQQQR 156 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchh-----hhhhhcCCcccCCHHHHHH
Confidence 778899999999999885 9999996321 1 12222222 2233333221 1222344456899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1362 l~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
++||||++++|+||||||||++||..+.+.+.+.|++..+++|+|++||+++.+.+ ||||++|++|++++.|+++++++
T Consensus 157 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 236 (252)
T PRK14272 157 LCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLFT 236 (252)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987668999999999999986 89999999999999999999988
Q ss_pred cCCcHHHH
Q 000511 1441 DECSVFSS 1448 (1455)
Q Consensus 1441 ~~~s~f~~ 1448 (1455)
++...+.+
T Consensus 237 ~~~~~~~~ 244 (252)
T PRK14272 237 NPRDERTE 244 (252)
T ss_pred CcCcHHHH
Confidence 76554533
No 265
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=363.29 Aligned_cols=219 Identities=24% Similarity=0.414 Sum_probs=182.8
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCC--CChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i~~~ 1290 (1455)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGS--FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECC--EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 4899999999964 3699999999999999999999999999999999999974 69999999999854 4456
Q ss_pred HHhcccEEEeCCCCCCC-CcHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFE-GSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~-gTIreNLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1455)
.+|+.++++||++.+|+ .|+++|+.... ..+. +++.++++.+++.+.+ +........+||||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qr 156 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-----KDRLDKPGGGLSGGQQQR 156 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hhHhhCCcccCCHHHHHH
Confidence 78899999999999987 49999986421 1111 2233344444332211 234456667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEe------CCeEEEeCC
Q 000511 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD------HGHLVEQGN 1434 (1455)
Q Consensus 1362 l~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~------~G~ive~G~ 1434 (1455)
++||||++++|+++||||||++||..+...+.+.|++..+++|||+|||+++.+.. ||||++|+ +|+|++.|+
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~~ 236 (258)
T PRK14241 157 LCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEIDD 236 (258)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecCC
Confidence 99999999999999999999999999999999999887667899999999999865 89999996 899999999
Q ss_pred hhHHhccCC
Q 000511 1435 PQTLLQDEC 1443 (1455)
Q Consensus 1435 p~eLl~~~~ 1443 (1455)
+++++.++.
T Consensus 237 ~~~~~~~~~ 245 (258)
T PRK14241 237 TEKIFSNPT 245 (258)
T ss_pred HHHHHhCcC
Confidence 999987543
No 266
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.9e-38 Score=375.80 Aligned_cols=208 Identities=25% Similarity=0.390 Sum_probs=174.3
Q ss_pred cceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCE----eCCCCChHHHh----cccEEEeCCCCC
Q 000511 1234 AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL----NIINTPVRDLR----GRFAVVPQSPFL 1305 (1455)
Q Consensus 1234 ~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~----di~~i~~~~lR----~~i~~VpQdp~l 1305 (1455)
.+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||. |+...+...+| ++++||||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5799999999999999999999999999999999999999999999996 67777655543 579999999999
Q ss_pred CC-CcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccC
Q 000511 1306 FE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1381 (1455)
Q Consensus 1306 f~-gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaT 1381 (1455)
|+ .|++||+.++.. .+.++. +....+.++.+||+........+||||||||++|||||+++|+||||||||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~-----~~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPt 192 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAER-----RKRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPF 192 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 98 699999975321 122211 112233444446665555666689999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHH
Q 000511 1382 ANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1446 (1455)
Q Consensus 1382 S~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f 1446 (1455)
|+||+.+.+.+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|++++.++...|
T Consensus 193 s~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~ 260 (382)
T TIGR03415 193 SALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDY 260 (382)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHH
Confidence 99999999999999987643 7999999999999754 89999999999999999999997765443
No 267
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=361.38 Aligned_cols=219 Identities=25% Similarity=0.383 Sum_probs=185.3
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCC-CCChHH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII-NTPVRD 1291 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~-~i~~~~ 1291 (1455)
.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4889999999963 4699999999999999999999999999999999999986 5999999999986 456677
Q ss_pred HhcccEEEeCCCCCCCCcHHHhcCcCC---CC-Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000511 1292 LRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1455)
Q Consensus 1292 lR~~i~~VpQdp~lf~gTIreNLdp~~---~~-~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1455)
+|+.++|+||+|.+|++|+++|+.... .. .+ +++.++++.+++.+. +....+.....||||||||++
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~LS~G~~qrv~ 155 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDE-----VKDRLKSHAFGLSGGQQQRLC 155 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchh-----hhHHhhcCcccCCHHHHHHHH
Confidence 889999999999999999999997431 11 11 122333444443321 123445566789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1364 LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
||||++.+|+||||||||++||..+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.+++
T Consensus 156 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 235 (249)
T PRK14253 156 IARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFSNP 235 (249)
T ss_pred HHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcCC
Confidence 999999999999999999999999999999999987667999999999999886 8999999999999999999997654
Q ss_pred C
Q 000511 1443 C 1443 (1455)
Q Consensus 1443 ~ 1443 (1455)
.
T Consensus 236 ~ 236 (249)
T PRK14253 236 K 236 (249)
T ss_pred C
Confidence 3
No 268
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=367.22 Aligned_cols=225 Identities=24% Similarity=0.345 Sum_probs=185.9
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCCC--C
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1288 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~i--~ 1288 (1455)
...|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +
T Consensus 37 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 346899999999964 359999999999999999999999999999999999865 4999999999998643 3
Q ss_pred hHHHhcccEEEeCCCCCCCCcHHHhcCcCCC---C-Ch----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000511 1289 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1455)
Q Consensus 1289 ~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~---~-~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1455)
...+|++++|+||+|.+|++|++||+..... . +. +++.++++..++.+. +..........|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LSgGq~q 189 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDE-----VSDRLDKNALGLSGGQQQ 189 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccc-----hhhHhhCChhhCCHHHHH
Confidence 3467889999999999999999999974311 1 11 223344444433211 122344556689999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1361 rl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
|++|||||+++|++|||||||++||.++.+.+.+.|++..+++|||+++|+++.+.+ ||||++|++|++++.|+++++.
T Consensus 190 rv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 190 RLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999887667899999999999876 8999999999999999999998
Q ss_pred ccCCcHHH
Q 000511 1440 QDECSVFS 1447 (1455)
Q Consensus 1440 ~~~~s~f~ 1447 (1455)
+++...+.
T Consensus 270 ~~~~~~~~ 277 (286)
T PRK14275 270 TNPKDRMT 277 (286)
T ss_pred hCCCcHHH
Confidence 76554343
No 269
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-38 Score=361.86 Aligned_cols=223 Identities=24% Similarity=0.342 Sum_probs=188.3
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCC--CChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i~~~ 1290 (1455)
.+.+++.+++|+. .++|+|+||+|+|||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4889999999964 4699999999999999999999999999999999999986 79999999999864 3445
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCCCC------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMN------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1364 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~~~------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1364 (1455)
.+|++++|+||+|.+|..|++||+.+.... .++++.++++.+++.+.+. ...++...+||+|||||++|
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-----~~~~~~~~~LS~G~~qrv~l 160 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVK-----DKLKVSGLSLSGGQQQRLCI 160 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhh-----hhhhCCcccCCHHHHHHHHH
Confidence 678899999999999999999999754211 1234555666655533221 23445667899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEe--------CCeEEEeCCh
Q 000511 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD--------HGHLVEQGNP 1435 (1455)
Q Consensus 1365 ARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~--------~G~ive~G~p 1435 (1455)
|||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.+ ||||++|+ +|++++.|++
T Consensus 161 aral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 161 ARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 99999999999999999999999999999999988778899999999998875 89999996 8999999999
Q ss_pred hHHhccCCcHHH
Q 000511 1436 QTLLQDECSVFS 1447 (1455)
Q Consensus 1436 ~eLl~~~~s~f~ 1447 (1455)
+++++++...+.
T Consensus 241 ~~~~~~~~~~~~ 252 (261)
T PRK14263 241 AQIFQNPREQLT 252 (261)
T ss_pred HHHHhCCCcHHH
Confidence 999876543343
No 270
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=369.92 Aligned_cols=220 Identities=24% Similarity=0.418 Sum_probs=185.6
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-----CCCceEEECCEeCCCC--C
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1288 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~i--~ 1288 (1455)
+..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +
T Consensus 43 ~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 446999999999964 469999999999999999999999999999999999986 6899999999998753 4
Q ss_pred hHHHhcccEEEeCCCCCCCCcHHHhcCcCCC---------------C-----ChHHHHHHHHHhcHHHHHHhCCCchhhh
Q 000511 1289 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---------------N-----DDLKIWSVLEKCHVKEEVEAVGLETFVK 1348 (1455)
Q Consensus 1289 ~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~---------------~-----~d~ei~~aL~~~~l~~~i~~lgLdt~v~ 1348 (1455)
...+|++++|+||++.+|++|+++|+..... . .++++.++++.+++.+ +++...+
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~~~~~~~ 195 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWD-----EVNDRLD 195 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCch-----hhhHHhc
Confidence 5678899999999999999999999974211 0 0122334444443322 1234556
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEE-EEEeC
Q 000511 1349 ESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEI-LILDH 1426 (1455)
Q Consensus 1349 e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI-~vl~~ 1426 (1455)
....+||||||||++|||||+++|+||||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||+| ++|++
T Consensus 196 ~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~ 275 (305)
T PRK14264 196 DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTG 275 (305)
T ss_pred CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecC
Confidence 667789999999999999999999999999999999999999999999988777899999999999876 8997 56799
Q ss_pred CeEEEeCChhHHhccC
Q 000511 1427 GHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1427 G~ive~G~p~eLl~~~ 1442 (1455)
|++++.|+++++.+++
T Consensus 276 G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 276 GELVEYDDTDKIFENP 291 (305)
T ss_pred CEEEEeCCHHHHHhCc
Confidence 9999999999998654
No 271
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-38 Score=361.12 Aligned_cols=213 Identities=27% Similarity=0.392 Sum_probs=183.8
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 3789999999964 46999999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEeCCCCC-CCCcHHHhcCcCCC-C--C----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1298 VVPQSPFL-FEGSLRDNLDPFHM-N--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1298 ~VpQdp~l-f~gTIreNLdp~~~-~--~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
|+||++.+ ++.|++||+..... . + ++++.+ .++.+|++.........||||||||++|||||+
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~---------~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~ 150 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAA---------ALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLA 150 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHH---------HHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHh
Confidence 99999987 56799999965321 1 1 112233 333345655555666789999999999999999
Q ss_pred ------cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHhc
Q 000511 1370 ------KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1370 ------r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
++|++|||||||++||+++.+.+.+.|++.. ++.|||++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 151 ~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 151 QLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred cccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 5999999999999999999999999998764 4789999999999987 489999999999999999999876
Q ss_pred c
Q 000511 1441 D 1441 (1455)
Q Consensus 1441 ~ 1441 (1455)
.
T Consensus 231 ~ 231 (258)
T PRK13548 231 P 231 (258)
T ss_pred h
Confidence 3
No 272
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-39 Score=342.15 Aligned_cols=203 Identities=25% Similarity=0.371 Sum_probs=171.9
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
|+++|+++.|.. ..+++|+||+|++||+++++|||||||||+|++|.+.++|++|+|.++|
T Consensus 2 I~~~nvsk~y~~------~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr 75 (309)
T COG1125 2 IEFENVSKRYGN------KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRR 75 (309)
T ss_pred ceeeeeehhcCC------ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHH
Confidence 688999999862 3359999999999999999999999999999999999999999999987
Q ss_pred cEEEEcCCCCCCC-cCHHHHhccCC---CCCHH----HHHHHHHHhcchH-HHhhccCCCcccccCCCCccccHHHHHHH
Q 000511 669 SIAYVPQVPWILS-GTIRDNILFGK---NYDPQ----SYSETLKACTLDV-DISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1455)
Q Consensus 669 ~i~y~~Q~p~l~~-~ti~~nI~~g~---~~~~~----~~~~v~~~~~l~~-di~~l~~gd~t~ig~~g~~LSGGQkqRva 739 (1455)
+||||-|+.-||. .||.|||..-. .++++ +.++.++..+|+. +. .......|||||+|||.
T Consensus 76 ~IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~----------~~RyP~eLSGGQQQRVG 145 (309)
T COG1125 76 KIGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEY----------ADRYPHELSGGQQQRVG 145 (309)
T ss_pred hhhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHH----------hhcCchhcCcchhhHHH
Confidence 6999999999885 59999998643 35654 4556666677764 22 23455699999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccc-cccCCEEEEEeCCeEEEecCHHHHHh
Q 000511 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 740 lARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
+||||..+|+|+|+||||+||||-+.+.+-+....-...-++|+|+|||+++. ++-||||.+|++|+|+..++++++..
T Consensus 146 v~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 146 VARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 99999999999999999999999998887766332223347899999999987 45699999999999999999999976
Q ss_pred cc
Q 000511 819 SL 820 (1455)
Q Consensus 819 ~~ 820 (1455)
+.
T Consensus 226 ~P 227 (309)
T COG1125 226 NP 227 (309)
T ss_pred Cc
Confidence 53
No 273
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-38 Score=363.47 Aligned_cols=218 Identities=22% Similarity=0.342 Sum_probs=185.9
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
-.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999964 4699999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEeCCCCCCC-CcHHHhcCcCC-CC----C--hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1297 AVVPQSPFLFE-GSLRDNLDPFH-MN----D--DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1297 ~~VpQdp~lf~-gTIreNLdp~~-~~----~--d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
+|+||++.+|. .|+++|+.+.. .. . .++ ......+.++.+|++.........||||||||++||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~laral 158 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKE-----DEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVL 158 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHH-----HHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHHHH
Confidence 99999998875 59999997531 10 0 010 011122333444665555666778999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+++|++|||||||++||.++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++...
T Consensus 159 ~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 234 (265)
T PRK10253 159 AQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTA 234 (265)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhhH
Confidence 999999999999999999999999999987643 7899999999998866 899999999999999999998753
No 274
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-38 Score=359.10 Aligned_cols=204 Identities=28% Similarity=0.375 Sum_probs=175.7
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 11 ~~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 11 TPLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred CcEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 45999999999964 46999999999999999999999999999999999999999999999998763 467899
Q ss_pred EEEeCCCCCCC-CcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1297 AVVPQSPFLFE-GSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1297 ~~VpQdp~lf~-gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+|+||++.+|+ .|++||+.+... ..++++.++++ .+|++........+||||||||++|||||+++|++
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~---------~~gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~l 154 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALA---------AVGLADRANEWPAALSGGQKQRVALARALIHRPGL 154 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHH---------HcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999987 599999975421 11233333343 44565556666778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChh
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1436 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~ 1436 (1455)
|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 155 llLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 155 LLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999998763 37899999999999865 8999999999999988754
No 275
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-38 Score=363.81 Aligned_cols=221 Identities=25% Similarity=0.364 Sum_probs=186.6
Q ss_pred CccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCC--CC
Q 000511 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TP 1288 (1455)
Q Consensus 1216 ~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i~ 1288 (1455)
.-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 18 ~~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 18 HSVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred CceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 347999999999964 3699999999999999999999999999999999999863 69999999999864 34
Q ss_pred hHHHhcccEEEeCCCCCCCCcHHHhcCcCCC---C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1289 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1289 ~~~lR~~i~~VpQdp~lf~gTIreNLdp~~~---~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
...+|++++|+||++.+|++|+++|+..... . .++++.++++.+++.+.+ ..........||||||||+
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgGq~qrv 170 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-----KDKLKEKGTALSGGQQQRL 170 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-----HHHhcCCcccCCHHHHHHH
Confidence 4567899999999999998999999965321 1 123344455555543322 2234455678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEe---------CCeEEEe
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD---------HGHLVEQ 1432 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~---------~G~ive~ 1432 (1455)
+|||||+++|++|||||||++||..+.+.+.+.|++..+++|||+|+|+++.+.. ||||++|+ +|++++.
T Consensus 171 ~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~ 250 (274)
T PRK14265 171 CIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEF 250 (274)
T ss_pred HHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999988778999999999999865 89999997 8999999
Q ss_pred CChhHHhccCC
Q 000511 1433 GNPQTLLQDEC 1443 (1455)
Q Consensus 1433 G~p~eLl~~~~ 1443 (1455)
|+++++..++.
T Consensus 251 g~~~~~~~~~~ 261 (274)
T PRK14265 251 SPTEQMFGSPQ 261 (274)
T ss_pred CCHHHHHhCCC
Confidence 99999987654
No 276
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-38 Score=356.36 Aligned_cols=216 Identities=28% Similarity=0.416 Sum_probs=183.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|+. .++++|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.+++
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 578999999964 369999999999999999999999999999999999999999999999999987664 3678999
Q ss_pred EeCCCCCCCC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||++.+|.+ |+++|+.+... .+.... .....+.++.+|++........+||+|||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~l 151 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEI-----KERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKV 151 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999976 99999964211 111111 11123344445676666666778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCC
Q 000511 1375 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~ 1443 (1455)
+||||||++||..+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.+.+.
T Consensus 152 lllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~~ 223 (232)
T cd03300 152 LLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEPA 223 (232)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCCc
Confidence 999999999999999999999987643 7999999999999876 89999999999999999999987553
No 277
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-38 Score=354.24 Aligned_cols=204 Identities=26% Similarity=0.430 Sum_probs=174.0
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 578999999963 469999999999999999999999999999999999999999999999998753 46789999
Q ss_pred EeCCCCCCCC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||++.+|++ |++||+..... .+..+. ...+.+.++.+|++........+||||||||++||||++++|++
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~ 149 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEA-----RRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPEL 149 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHH-----HHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999876 99999864321 111111 11234455555777666777778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
+||||||++||+.+.+.+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|
T Consensus 150 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 150 LILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999998764 47899999999999876 8999999999998865
No 278
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-38 Score=361.44 Aligned_cols=221 Identities=25% Similarity=0.369 Sum_probs=186.2
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCC-----CceEEECCEeCCC--CCh
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIIN--TPV 1289 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~-----~G~I~IdG~di~~--i~~ 1289 (1455)
+.|+++|++++|+. +.+|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 46999999999964 36999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HHHhcccEEEeCCCCCCCCcHHHhcCcCC----CCCh----HHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000511 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp~lf~gTIreNLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1455)
..+|+.++++||++.+|+.|++||+.... ..++ +++.++++.+++.+.+ +...+.....||||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq~qr 158 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEI-----KHKIHKSALDLSGGQQQR 158 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchh-----hhHhcCCcccCCHHHHHH
Confidence 67889999999999999999999996431 1121 2234445555443322 223455667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeC-----CeEEEeC
Q 000511 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDH-----GHLVEQG 1433 (1455)
Q Consensus 1362 l~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~-----G~ive~G 1433 (1455)
++||||++++|++|||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++.|
T Consensus 159 v~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 238 (261)
T PRK14258 159 LCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEFG 238 (261)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEeC
Confidence 999999999999999999999999999999999998742 48999999999999875 799999999 9999999
Q ss_pred ChhHHhccCCc
Q 000511 1434 NPQTLLQDECS 1444 (1455)
Q Consensus 1434 ~p~eLl~~~~s 1444 (1455)
+|+++.+++..
T Consensus 239 ~~~~~~~~~~~ 249 (261)
T PRK14258 239 LTKKIFNSPHD 249 (261)
T ss_pred CHHHHHhCCCC
Confidence 99999876654
No 279
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3e-38 Score=355.25 Aligned_cols=211 Identities=24% Similarity=0.318 Sum_probs=175.9
Q ss_pred ccEEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHH---
Q 000511 1217 GLIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD--- 1291 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~--- 1291 (1455)
..|+++|++++|+++. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 3699999999997532 35999999999999999999999999999999999999999999999999998887654
Q ss_pred H-hcccEEEeCCCCCCCC-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000511 1292 L-RGRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1366 (1455)
Q Consensus 1292 l-R~~i~~VpQdp~lf~g-TIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1366 (1455)
. +++++++||+|.+|++ |++||+.... .....+. +..+.+.++.+|++.........||+|||||++|||
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrl~la~ 159 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQS-----RNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALAR 159 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHH
Confidence 2 3679999999999885 9999986421 1111111 111233344445555555556689999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhhCEEEEEeCCeEEEe
Q 000511 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1432 (1455)
Q Consensus 1367 AlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1432 (1455)
||+++|++|||||||++||+++.+.+.+.|++.. .++|||+|+|+++.+..||+|++|++|+++|.
T Consensus 160 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 160 AFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999998764 27899999999999988999999999999874
No 280
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=6.5e-38 Score=360.22 Aligned_cols=225 Identities=24% Similarity=0.370 Sum_probs=185.1
Q ss_pred cEEEEEEEEEecCC-------CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH
Q 000511 1218 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~ 1290 (1455)
.|+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999521 24699999999999999999999999999999999999999999999999999766666
Q ss_pred HHhcccEEEeCCCC--CCCC-cHHHhcCcC---C-CCC----hHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhH
Q 000511 1291 DLRGRFAVVPQSPF--LFEG-SLRDNLDPF---H-MND----DLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQ 1358 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~--lf~g-TIreNLdp~---~-~~~----d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQ 1358 (1455)
..|++++|+||+|. +++. |+.+|+... + ... ++++.++++. +|++. .......+||+||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~~LS~G~ 154 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQ---------VGLLPDHASYYPHMLAPGQ 154 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHH---------cCCChHHHhcCchhcCHHH
Confidence 66778999999985 4544 888887531 1 111 1223334444 45532 2333446899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCCh
Q 000511 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1359 rQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p 1435 (1455)
|||++||||++++|+||||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++
T Consensus 155 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 234 (267)
T PRK15112 155 KQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGST 234 (267)
T ss_pred HHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCH
Confidence 999999999999999999999999999999999999998864 37899999999999987 899999999999999999
Q ss_pred hHHhccCC-cHHHHHHH
Q 000511 1436 QTLLQDEC-SVFSSFVR 1451 (1455)
Q Consensus 1436 ~eLl~~~~-s~f~~l~~ 1451 (1455)
+++.+++. ..+++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~ 251 (267)
T PRK15112 235 ADVLASPLHELTKRLIA 251 (267)
T ss_pred HHHhcCCCCHHHHHHHH
Confidence 99987653 34556665
No 281
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-38 Score=372.44 Aligned_cols=226 Identities=21% Similarity=0.325 Sum_probs=183.7
Q ss_pred cEEEEEEEEEecC--CCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC----CCCceEEECCEeCCCCChHH
Q 000511 1218 LIEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP----ICGGQILVDGLNIINTPVRD 1291 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~----~~~G~I~IdG~di~~i~~~~ 1291 (1455)
.++++|++++|+. +...+|+||||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4899999999953 22469999999999999999999999999999999999986 58999999999999888766
Q ss_pred Hh----cccEEEeCCCC--CCC-CcHHHhcCcC-------CC-CCh-HHHHHHHHHhcHHHHHHhCCCch---hhhcCCC
Q 000511 1292 LR----GRFAVVPQSPF--LFE-GSLRDNLDPF-------HM-NDD-LKIWSVLEKCHVKEEVEAVGLET---FVKESGI 1352 (1455)
Q Consensus 1292 lR----~~i~~VpQdp~--lf~-gTIreNLdp~-------~~-~~d-~ei~~aL~~~~l~~~i~~lgLdt---~v~e~G~ 1352 (1455)
++ +++++|||+|. +++ .||.+|+... +. ..+ .+. +....+.++.+||+. .......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~~~gL~~~~~~~~~~p~ 157 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWR-----KRRAIELLHRVGIKDHKDAMRSFPY 157 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHH-----HHHHHHHHHHCCCCChHHHHhCCch
Confidence 53 47999999996 333 4898887421 00 011 010 011223344445542 2455667
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeE
Q 000511 1353 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHL 1429 (1455)
Q Consensus 1353 ~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1429 (1455)
.||||||||++|||||+.+|+|||+||||++||..+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|
T Consensus 158 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~i 237 (330)
T PRK15093 158 ELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQT 237 (330)
T ss_pred hCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEE
Confidence 8999999999999999999999999999999999999999999988643 7899999999999976 999999999999
Q ss_pred EEeCChhHHhccCCcHHHH
Q 000511 1430 VEQGNPQTLLQDECSVFSS 1448 (1455)
Q Consensus 1430 ve~G~p~eLl~~~~s~f~~ 1448 (1455)
+|.|+++++.+++...|.+
T Consensus 238 ve~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 238 VETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EEECCHHHHHhCCCCHHHH
Confidence 9999999999876656654
No 282
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.5e-38 Score=354.11 Aligned_cols=200 Identities=30% Similarity=0.418 Sum_probs=170.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH---HHhcc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~---~lR~~ 1295 (1455)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++.. .+|+.
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999532 4699999999999999999999999999999999999999999999999999887643 46789
Q ss_pred cEEEeCCCCCCC-CcHHHhcCcCCC---CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000511 1296 FAVVPQSPFLFE-GSLRDNLDPFHM---ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1296 i~~VpQdp~lf~-gTIreNLdp~~~---~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1455)
++|+||+|.+|. .|+++|+..... .. +++++++++.. |++........+||||||||++||||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrl~la~a 151 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQV---------GLEHKADAFPEQLSGGEQQRVAIARA 151 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc---------CChhhhhCChhhCCHHHHHHHHHHHH
Confidence 999999999986 599999865311 11 22333444444 55444444556899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCe
Q 000511 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGH 1428 (1455)
Q Consensus 1368 lLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1428 (1455)
|+++|+++||||||++||+++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 152 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 152 IVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999998864 48999999999999986 89999999985
No 283
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=4.8e-38 Score=351.99 Aligned_cols=207 Identities=27% Similarity=0.377 Sum_probs=173.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHH---Hhcc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LRGR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~---lR~~ 1295 (1455)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++... +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999532 46999999999999999999999999999999999999999999999999998876543 6889
Q ss_pred cEEEeCCCCCC-CCcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1296 FAVVPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1296 i~~VpQdp~lf-~gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
++|+||+|.+| ..|++||+.... ..++++..+. ..+.++.+|++........+||+|||||++||||++++
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNK 155 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcC
Confidence 99999999875 569999997531 1222222211 12233444665555566678999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEE
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVE 1431 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1431 (1455)
|++|||||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 156 PAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999998763 47899999999999976 79999999999853
No 284
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.6e-38 Score=352.02 Aligned_cols=208 Identities=25% Similarity=0.380 Sum_probs=182.5
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh----HHHhcc
Q 000511 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV----RDLRGR 1295 (1455)
Q Consensus 1220 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~----~~lR~~ 1295 (1455)
.+.|+.++|+++ .++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 578999999755 569999999999999999999999999999999999999999999999998876542 345678
Q ss_pred cEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1296 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1296 i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
++|+||+|.+|+.|+++|+......++++..++++.+++.+.++.+ |+++.++....+||+|||||++||||++++|+
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 160 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTN 160 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 9999999999999999999876545566677888888888777665 78888888888999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHH--HHHHhc-CCcEEEEeccChhhHhhhCEEEEEeCCe
Q 000511 1374 VLCLDECTANVDAQTASILQN--AISSEC-KGMTVITIAHRISTVLNMDEILILDHGH 1428 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~--~i~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1428 (1455)
+|||||||++||..+.+.+.+ .++... .+.|+|++||+.+.+..||++++|++|+
T Consensus 161 illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 161 IVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999888877 444332 3689999999999999999999999984
No 285
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-38 Score=359.89 Aligned_cols=222 Identities=25% Similarity=0.355 Sum_probs=185.3
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC--C---CCceEEECCEeCCC--CChH
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIIN--TPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~--~---~~G~I~IdG~di~~--i~~~ 1290 (1455)
.|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999964 469999999999999999999999999999999999975 4 59999999999864 3455
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCC---C-CC----hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---M-ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~---~-~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
.+|++++|+||+|.+|+.|+++|+.... . .. ++++.++++.+++.+ ++.........+||+|||||+
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~i~~~~~~~~~~LS~Gq~qrv 157 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWD-----EVKDHLHESALSLSGGQQQRV 157 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCcc-----chhhHHhcCcccCCHHHHHHH
Confidence 6788999999999999999999996421 1 11 122333444443321 122344556678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||||++++|++|||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+...+
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 237 (252)
T PRK14255 158 CIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMFLN 237 (252)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999887667899999999999875 899999999999999999999876
Q ss_pred CCcHH
Q 000511 1442 ECSVF 1446 (1455)
Q Consensus 1442 ~~s~f 1446 (1455)
+...+
T Consensus 238 ~~~~~ 242 (252)
T PRK14255 238 PKEKE 242 (252)
T ss_pred CCChH
Confidence 65433
No 286
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-38 Score=350.44 Aligned_cols=200 Identities=25% Similarity=0.400 Sum_probs=170.2
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|++. . .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999642 2 39999999999999999999999999999999999999999999999987654 3678999
Q ss_pred EeCCCCCCCC-cHHHhcCcCCCC-------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~~~-------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
+||+|.+|++ |++||+.+.... .++++.++++.+ |++.........||+|||||++||||+++
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~ia~al~~ 145 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARV---------GLAGLEKRLPGELSGGERQRVALARVLVR 145 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHc---------CCHHHHhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999986 999999753211 122344444444 55544555566899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
+|++|||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 146 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 146 DKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999998764 37899999999999976 8999999999998765
No 287
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=4e-38 Score=360.22 Aligned_cols=215 Identities=23% Similarity=0.344 Sum_probs=182.8
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 689999999964 469999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EeCCCC-CCCCcHHHhcCcCCC-C------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1299 VPQSPF-LFEGSLRDNLDPFHM-N------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1299 VpQdp~-lf~gTIreNLdp~~~-~------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
+||++. .+..|+++|+..+.. . ..++ ....+.+.++.+|+..........||+|||||++||||++.
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~ 154 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPH-----DAAVVDRALARTELSHLADRDMSTLSGGERQRVHVARALAQ 154 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHH-----HHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhc
Confidence 999995 456799999965321 0 0000 01112333444455544555667899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHhc
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
+|+++||||||++||.++.+.+.+.|++.. ++.|||++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 155 EPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 999999999999999999999999998764 3789999999999995 599999999999999999999865
No 288
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-38 Score=357.23 Aligned_cols=227 Identities=27% Similarity=0.386 Sum_probs=188.3
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECC------EeCCCCChH
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDG------LNIINTPVR 1290 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG------~di~~i~~~ 1290 (1455)
..++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+.+..
T Consensus 9 ~~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 9 DVFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred hheeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 35999999999964 4699999999999999999999999999999999999999997666655 677777777
Q ss_pred HHhcccEEEeCCCCCCCC-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCc----hhhhcCCCCCChhHHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQL 1361 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~g-TIreNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLd----t~v~e~G~~LSgGQrQr 1361 (1455)
.+|++++|+||+|.+|++ |+++|+.... ...+++.++. +.+.++.+|++ ...+..+..||+|||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qr 161 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKI-----VEECLRKVGLWKEVYDRLNSPASQLSGGQQQR 161 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHH-----HHHHHHHcCCCccchhhhcCCcccCCHHHHHH
Confidence 889999999999999986 9999997431 1122232221 22233334553 23455667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHhc
Q 000511 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1362 l~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
++||||++++|++++|||||++||..+.+.+.+.|++..+++|||++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 162 l~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~~ 241 (257)
T PRK14246 162 LTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIFT 241 (257)
T ss_pred HHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999988767899999999999995 599999999999999999999988
Q ss_pred cCCcHHHHHH
Q 000511 1441 DECSVFSSFV 1450 (1455)
Q Consensus 1441 ~~~s~f~~l~ 1450 (1455)
++...+.+.+
T Consensus 242 ~~~~~~~~~~ 251 (257)
T PRK14246 242 SPKNELTEKY 251 (257)
T ss_pred CCCcHHHHHH
Confidence 7654455443
No 289
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.8e-38 Score=354.26 Aligned_cols=211 Identities=25% Similarity=0.347 Sum_probs=180.9
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999963 46999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCCCCCCCcHHHhcCcCCCC--ChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1298 VVPQSPFLFEGSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1298 ~VpQdp~lf~gTIreNLdp~~~~--~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
|+||++.+|+.|++||+...... .+.+ ...+.+.++.+|++ +.......+||+|||||++||||++++|++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPD------PAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKV 158 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChH------HHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999642110 1100 01123444555774 456677789999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhhCEEEEEe-CCeEEEeCChh
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILD-HGHLVEQGNPQ 1436 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~-~G~ive~G~p~ 1436 (1455)
+||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 159 LLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999998864 3789999999999998899999995 66667888874
No 290
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-38 Score=347.32 Aligned_cols=220 Identities=30% Similarity=0.427 Sum_probs=183.6
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCE---eCCCCChHHHhc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL---NIINTPVRDLRG 1294 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~---di~~i~~~~lR~ 1294 (1455)
.|+++|++..|+. .++++|||++|+.||.+|+.||||||||||+++|.|+..|++|+|.+||. |.++++.+ .+
T Consensus 2 ~i~i~~~~~~~~~--~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~R 77 (345)
T COG1118 2 SIRINNVKKRFGA--FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--DR 77 (345)
T ss_pred ceeehhhhhhccc--ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--hc
Confidence 3778899888864 36899999999999999999999999999999999999999999999999 77774443 46
Q ss_pred ccEEEeCCCCCCCC-cHHHhcCcCCCC-----ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1295 RFAVVPQSPFLFEG-SLRDNLDPFHMN-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1295 ~i~~VpQdp~lf~g-TIreNLdp~~~~-----~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
+||+|.||.-||.- ||++|+.++-+. ++.++. ....+.++-..|+-.-+.-...||||||||+||||||
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r-----~rv~elL~lvqL~~la~ryP~QLSGGQrQRVALARAL 152 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIR-----ARVEELLRLVQLEGLADRYPAQLSGGQRQRVALARAL 152 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHH-----HHHHHHHHHhcccchhhcCchhcChHHHHHHHHHHHh
Confidence 89999999999865 999999887422 222221 1222222222344333455678999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcH
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSV 1445 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~ 1445 (1455)
.-.|++|+||||.++||.+-.+.+++-+++.. -+.|+++|||+.+.+.. ||||+||++|+|...|+|+|....+++.
T Consensus 153 A~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s~ 232 (345)
T COG1118 153 AVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPASR 232 (345)
T ss_pred hcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCcc
Confidence 99999999999999999999999999888764 38999999999998765 8999999999999999999999999876
Q ss_pred H
Q 000511 1446 F 1446 (1455)
Q Consensus 1446 f 1446 (1455)
|
T Consensus 233 f 233 (345)
T COG1118 233 F 233 (345)
T ss_pred c
Confidence 6
No 291
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.3e-38 Score=365.80 Aligned_cols=213 Identities=30% Similarity=0.507 Sum_probs=185.2
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.++++|++.+|.. ...+|+||||+|++||.+|++||||||||||+++|.|+++|++|+|.++|.|...- ....|+++|
T Consensus 4 ~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 4788999999973 24699999999999999999999999999999999999999999999999998765 678899999
Q ss_pred EEeCCCCCCCC-cHHHhcCcCCC-------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1298 VVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1298 ~VpQdp~lf~g-TIreNLdp~~~-------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
|+||+|.+++. |++|||+++.. ..++++.+.++..+| +..-......||+|||||+.||+||+
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L---------~~~~~~~~~~lS~G~kqrl~ia~aL~ 152 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGL---------EDKANKKVRTLSGGMKQRLSIALALL 152 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCC---------chhhCcchhhcCHHHHHHHHHHHHHh
Confidence 99999998876 99999986432 113355555655554 43223334579999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC-C-cEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1370 KSSKVLCLDECTANVDAQTASILQNAISSECK-G-MTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~-~-~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
.+|++|||||||++||+.+...+.+.|++..+ + +||++.||.++.+.. ||||++|++|+++..|+++++.+.
T Consensus 153 ~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 153 HDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred cCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999998865 4 799999999999988 999999999999999999998754
No 292
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.8e-38 Score=350.08 Aligned_cols=201 Identities=25% Similarity=0.379 Sum_probs=171.0
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|++|+|.. +++|+|+||++++|++++|+|||||||||||++|+|.++|.+|+|.++|
T Consensus 2 ~L~~~~ls~~y~~------~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelA 75 (258)
T COG1120 2 MLEVENLSFGYGG------KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELA 75 (258)
T ss_pred eeEEEEEEEEECC------eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHh
Confidence 3678999999973 3359999999999999999999999999999999999999999999998
Q ss_pred -cEEEEcCCCCCCC-cCHHHHhccCCC-C----------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000511 669 -SIAYVPQVPWILS-GTIRDNILFGKN-Y----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~-~ti~~nI~~g~~-~----------~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQk 735 (1455)
.+||+||++.... -||+|-+.+|+. + |++...++++.+++++-. ...-.+||||||
T Consensus 76 k~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGer 144 (258)
T COG1120 76 KKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGER 144 (258)
T ss_pred hhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHH
Confidence 6999999987654 499999999852 1 333455667777776432 234458999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccc-cccCCEEEEEeCCeEEEecCHH
Q 000511 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSA 814 (1455)
Q Consensus 736 qRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~ 814 (1455)
|||.|||||.++|+|++||||||+||....-.+++.+..-...+|+|+|+|+|+++. +.+||++++|++|+++.+|+++
T Consensus 145 Qrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ 224 (258)
T COG1120 145 QRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPE 224 (258)
T ss_pred HHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcc
Confidence 999999999999999999999999999999999887432223457899999999987 5679999999999999999998
Q ss_pred HHHh
Q 000511 815 DLAV 818 (1455)
Q Consensus 815 ~l~~ 818 (1455)
|...
T Consensus 225 evlT 228 (258)
T COG1120 225 EVLT 228 (258)
T ss_pred hhcC
Confidence 8754
No 293
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.6e-38 Score=352.11 Aligned_cols=204 Identities=26% Similarity=0.416 Sum_probs=173.8
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCC--CChHHHhccc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRF 1296 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~--i~~~~lR~~i 1296 (1455)
|+++||+++|+. .++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 478999999964 469999999999999999999999999999999999999999999999999853 4556778999
Q ss_pred EEEeCCCCCCC-CcHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1297 AVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1297 ~~VpQdp~lf~-gTIreNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
+|+||+|.+|+ .|++||+.... ..+.++..+ ...+.++.+|++........+||+|||||++||||++++
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 153 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMN 153 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcC
Confidence 99999999887 59999996532 112222111 123445555777666777778999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeE
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1429 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1429 (1455)
|++|||||||++||+++.+.+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++
T Consensus 154 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 154 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999998764 47899999999999975 999999999975
No 294
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.1e-38 Score=352.62 Aligned_cols=201 Identities=33% Similarity=0.457 Sum_probs=166.2
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000511 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1455)
Q Consensus 1220 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~V 1299 (1455)
+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 46899999964 46999999999999999999999999999999999999999999999998874 468899999
Q ss_pred eCCCCC---CCCcHHHhcCcCCCC-------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1300 PQSPFL---FEGSLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1300 pQdp~l---f~gTIreNLdp~~~~-------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
||+|.+ |+.|++||+...... ..++. .....+.++.+|++........+||||||||++|||||+
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~ 148 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKAD-----KAKVDEALERVGLSELADRQIGELSGGQQQRVLLARALV 148 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHH-----HHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHH
Confidence 999976 568999999643211 11111 111223334445555455566789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1370 KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++| +++.|
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 149 QDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999998764 57899999999999876 8999999986 55654
No 295
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-37 Score=351.28 Aligned_cols=214 Identities=27% Similarity=0.444 Sum_probs=180.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|+. .+|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~---~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE---FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC---ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 578999999963 38999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred EeCCCCCCC-CcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf~-gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||++.+|+ .|++||+..... .+..+..+ .+.+.++.+|+...+.....+||+|||||++||||++++|++
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~l 150 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIER-----KVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARALVVNPKI 150 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhHHhcCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 999999886 699999964211 11111111 122333344555555566678999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1375 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
++|||||++||..+.+.+.+.+++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 151 lllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 151 LLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999988643 8999999999999876 8999999999999999999998764
No 296
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-38 Score=359.74 Aligned_cols=220 Identities=24% Similarity=0.308 Sum_probs=184.9
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCC--------CceEEECCEeCCCCChH
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC--------GGQILVDGLNIINTPVR 1290 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~--------~G~I~IdG~di~~i~~~ 1290 (1455)
++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 789999999964 36999999999999999999999999999999999999998 99999999999988888
Q ss_pred HHhcccEEEeCCCC-CCCCcHHHhcCcCCC-C-ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000511 1291 DLRGRFAVVPQSPF-LFEGSLRDNLDPFHM-N-DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~-lf~gTIreNLdp~~~-~-~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1455)
.+|+.++|+||++. +|+.|++||+..... . ........-......+.++.+|+++.++.....||||||||++||||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~lara 159 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVTTLSGGELARVQFARV 159 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHH
Confidence 88889999999986 578899999965321 0 00000000001112344455577777777778999999999999999
Q ss_pred Hc---------cCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCCh
Q 000511 1368 LL---------KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1368 lL---------r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p 1435 (1455)
|+ .+|++|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|++|++++.|++
T Consensus 160 l~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (272)
T PRK13547 160 LAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAHGAP 239 (272)
T ss_pred HhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEecCH
Confidence 99 59999999999999999999999999987643 7899999999999864 999999999999999999
Q ss_pred hHHhc
Q 000511 1436 QTLLQ 1440 (1455)
Q Consensus 1436 ~eLl~ 1440 (1455)
+++++
T Consensus 240 ~~~~~ 244 (272)
T PRK13547 240 ADVLT 244 (272)
T ss_pred HHHcC
Confidence 99875
No 297
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.8e-38 Score=368.22 Aligned_cols=207 Identities=26% Similarity=0.400 Sum_probs=174.7
Q ss_pred EecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCC
Q 000511 1227 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1306 (1455)
Q Consensus 1227 ~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf 1306 (1455)
+|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4642 469999999999999999999999999999999999999999999999999976 3456788999999999999
Q ss_pred CC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCc
Q 000511 1307 EG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTA 1382 (1455)
Q Consensus 1307 ~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS 1382 (1455)
++ |++||+.+... .+..+..+ ...+.++.+|++........+||||||||++|||||+++|++|||||||+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEE-----RAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 86 99999975321 11111111 12334444466555555666899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1383 NVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1383 ~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999998764 47899999999999876 999999999999999999998764
No 298
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-37 Score=351.60 Aligned_cols=209 Identities=24% Similarity=0.405 Sum_probs=178.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++||+++|+.. ..|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 6899999999632 249999999999999999999999999999999999999999999999987654 3578999
Q ss_pred EeCCCCCCCC-cHHHhcCcCC-CC---C---hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFH-MN---D---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~-~~---~---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
+||++.+|++ |++||+.... .. . ++++.++++.+ |++..+......||||||||++||||+++
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~laral~~ 146 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQM---------GIEDLLARLPGQLSGGQRQRVALARCLVR 146 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHc---------CcHHHHhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999986 9999997431 11 1 22334444444 55555555556899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
+|+++||||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 147 ~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~~ 221 (232)
T PRK10771 147 EQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSGK 221 (232)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCh
Confidence 9999999999999999999999999988643 7899999999999876 8999999999999999999998754
No 299
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.9e-38 Score=347.20 Aligned_cols=204 Identities=52% Similarity=0.902 Sum_probs=181.7
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcCcEEEEcCCCCCCC
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILS 681 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~p~l~~ 681 (1455)
++++|+++.|..... +..++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|+|+|++|+|.+++
T Consensus 1 l~~~~l~~~~~~~~~-~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~ 79 (204)
T cd03250 1 ISVEDASFTWDSGEQ-ETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQN 79 (204)
T ss_pred CEEeEEEEecCCCCc-cccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhcc
Confidence 367899999964210 0023699999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCccccc
Q 000511 682 GTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVD 761 (1455)
Q Consensus 682 ~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD 761 (1455)
.|++||+.++..+++++..++.+.+++...+..+|.|+++.+++++.+||||||||++||||++++|++++|||||++||
T Consensus 80 ~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD 159 (204)
T cd03250 80 GTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVD 159 (204)
T ss_pred CcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 99999999987777777788888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCe
Q 000511 762 AQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1455)
Q Consensus 762 ~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1455)
++..+.+++.++......++|+|++||+++.+..||++++|++|+
T Consensus 160 ~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 160 AHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999888887544322234689999999999988899999999984
No 300
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1e-37 Score=356.30 Aligned_cols=221 Identities=26% Similarity=0.422 Sum_probs=182.0
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC----CCceEEECCEeCCCCChHHHh
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI----CGGQILVDGLNIINTPVRDLR 1293 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~----~~G~I~IdG~di~~i~~~~lR 1293 (1455)
.++++|++++| + .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 58999999999 2 3699999999999999999999999999999999999999 999999999998632 2234
Q ss_pred cccEEEeCCCC-CCC--CcHHHhcCc----CC-CCChHHHHHHHHHhcHHHHHHhCCCch---hhhcCCCCCChhHHHHH
Q 000511 1294 GRFAVVPQSPF-LFE--GSLRDNLDP----FH-MNDDLKIWSVLEKCHVKEEVEAVGLET---FVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1294 ~~i~~VpQdp~-lf~--gTIreNLdp----~~-~~~d~ei~~aL~~~~l~~~i~~lgLdt---~v~e~G~~LSgGQrQrl 1362 (1455)
+.++|+||+|. .|. .|+.+|+.. .+ ...+++++++++.+ |++. .++.....||+|||||+
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAV---------GLENAARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHc---------CCCChhhhhhcCCcccCHHHHHHH
Confidence 67999999985 343 477777532 11 12233444445444 4443 45667778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
+|||||+++|+||||||||++||..+.+.+.+.|++..+ ++|||+|||+++.+.+ ||||++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999988643 7899999999999875 8999999999999999999998
Q ss_pred ccCCc-HHHHHHHh
Q 000511 1440 QDECS-VFSSFVRA 1452 (1455)
Q Consensus 1440 ~~~~s-~f~~l~~~ 1452 (1455)
+++.. .++.++..
T Consensus 230 ~~~~~~~~~~~~~~ 243 (254)
T PRK10418 230 NAPKHAVTRSLVSA 243 (254)
T ss_pred hCCCCHHHHHHHHh
Confidence 76544 45555543
No 301
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-37 Score=330.61 Aligned_cols=220 Identities=27% Similarity=0.425 Sum_probs=187.4
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH-hccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l-R~~i 1296 (1455)
-++++|++..|.. -.+|++|||++++||.++++||||+||||++++|+|+.++.+|+|.++|.||...+++.. |..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 4789999999975 469999999999999999999999999999999999999999999999999999988765 6679
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCCC-ChHHHHHHHHHhcHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHMN-DDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~~-~d~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
+||||...+|+. ||.|||..+... .+++-++ ..+++..+-+ -|....+..+.+|||||+|.++|||||+.+||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~----~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQE----RDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhccccccccc----ccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 999999999976 999999765322 1111111 0122222222 45566677778999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCC
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~ 1443 (1455)
+|+|||||.+|-+.--+.|.++|++..+ +.||+.|-++.....+ +||.+||++|+|+..|+.+||.++++
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~~ 229 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADPD 229 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCHH
Confidence 9999999999999999999999988764 5699999999998765 89999999999999999999998764
No 302
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=8.2e-38 Score=355.37 Aligned_cols=215 Identities=20% Similarity=0.286 Sum_probs=177.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCC--CCCCceEEECCEeCCCCChHHH-hcc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDL-RGR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~--~~~~G~I~IdG~di~~i~~~~l-R~~ 1295 (1455)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999963 46999999999999999999999999999999999994 7999999999999988877654 456
Q ss_pred cEEEeCCCCCCCC-cHHHhcCcCCC----------CChHHHHHHHHHhcHHHHHHhCCCchh-hhcCCC-CCChhHHHHH
Q 000511 1296 FAVVPQSPFLFEG-SLRDNLDPFHM----------NDDLKIWSVLEKCHVKEEVEAVGLETF-VKESGI-SFSVGQRQLI 1362 (1455)
Q Consensus 1296 i~~VpQdp~lf~g-TIreNLdp~~~----------~~d~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~-~LSgGQrQrl 1362 (1455)
++++||+|.+|++ |+++|+..... .+..+.. ..+.+.++.+|++.. ...... .||||||||+
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl 153 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL-----KLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRN 153 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHH-----HHHHHHHHHcCCchhhcccccccCcCHHHHHHH
Confidence 9999999999987 89999853210 0111111 122344445577543 333333 4999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh--hCEEEEEeCCeEEEeCChhHHh
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN--MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~--~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
+||||++++|++|||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 154 EILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELAK 233 (243)
T ss_pred HHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHhc
Confidence 99999999999999999999999999999999998864 47899999999999986 7999999999999999998654
Q ss_pred c
Q 000511 1440 Q 1440 (1455)
Q Consensus 1440 ~ 1440 (1455)
.
T Consensus 234 ~ 234 (243)
T TIGR01978 234 E 234 (243)
T ss_pred c
Confidence 3
No 303
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.3e-37 Score=357.69 Aligned_cols=231 Identities=22% Similarity=0.331 Sum_probs=189.8
Q ss_pred cEEEEEEEEEecCC-------CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh-
Q 000511 1218 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV- 1289 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~- 1289 (1455)
.|+++||+++|+.. .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38999999999741 3579999999999999999999999999999999999999999999999999988765
Q ss_pred --HHHhcccEEEeCCCC--CC-CCcHHHhcCcC-CCCChHHHHHHHHHhcHHHHHHhCCCch-hhhcCCCCCChhHHHHH
Q 000511 1290 --RDLRGRFAVVPQSPF--LF-EGSLRDNLDPF-HMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1290 --~~lR~~i~~VpQdp~--lf-~gTIreNLdp~-~~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl 1362 (1455)
..+|+.++|+||++. ++ ..|+++|+... ....+ +...-....+.+.++.+|+++ ..+.....||+|||||+
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl 160 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLS--LDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRV 160 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhcc--CCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHH
Confidence 346889999999983 44 36999998531 10000 001111223455666668874 56677789999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
+|||||+++|+||||||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 161 CLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhcc
Confidence 999999999999999999999999999999999987643 7899999999999985 8999999999999999999998
Q ss_pred ccCCcHHHHHHH
Q 000511 1440 QDECSVFSSFVR 1451 (1455)
Q Consensus 1440 ~~~~s~f~~l~~ 1451 (1455)
.. ++.|..-+.
T Consensus 241 ~~-~~~~~~~~~ 251 (268)
T PRK10419 241 TF-SSPAGRVLQ 251 (268)
T ss_pred CC-CCHHHHHHH
Confidence 64 445544443
No 304
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-38 Score=325.49 Aligned_cols=217 Identities=26% Similarity=0.412 Sum_probs=187.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|.|+|||.|+.+-| ...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p-~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDP-SFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccCh-HHHhhhcce
Confidence 678999999976 334899999999999999999999999999999999999999999999999998765 667999999
Q ss_pred EeCCCCCCC-CcHHHhcCcCCCC---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLFE-GSLRDNLDPFHMN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf~-gTIreNLdp~~~~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
++-+.-++. -|.||||.+++.. ++.++. +...+..+.++++..+..+-.+||.|+|||++|||||.++|+|
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~k-----ari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i 154 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIK-----ARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSI 154 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHH-----HHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCe
Confidence 997766775 4999999887532 333332 2233444455666666655567999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
++||||||+||.-+.+.+++.|++.. .+++||+-||-++.++ -||||+++.+|+++..|+++++.++.
T Consensus 155 ~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~ 224 (245)
T COG4555 155 LVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDART 224 (245)
T ss_pred EEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHH
Confidence 99999999999999999999998775 4999999999999998 59999999999999999999998754
No 305
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.5e-38 Score=331.04 Aligned_cols=203 Identities=31% Similarity=0.413 Sum_probs=173.5
Q ss_pred CceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC----------
Q 000511 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1455)
Q Consensus 599 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 668 (1455)
+..|+++++++++.. +.+++|+||+|++||+++|+|||||||||||++|+|+++|++|+|.+.|
T Consensus 6 ~~~I~vr~v~~~fG~------~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~ 79 (263)
T COG1127 6 EPLIEVRGVTKSFGD------RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEE 79 (263)
T ss_pred cceEEEeeeeeecCC------EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHH
Confidence 567999999999853 3459999999999999999999999999999999999999999999987
Q ss_pred ------cEEEEcCCCCCCCc-CHHHHhccC----CCCCHHHHH----HHHHHhcchHH-HhhccCCCcccccCCCCcccc
Q 000511 669 ------SIAYVPQVPWILSG-TIRDNILFG----KNYDPQSYS----ETLKACTLDVD-ISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 669 ------~i~y~~Q~p~l~~~-ti~~nI~~g----~~~~~~~~~----~v~~~~~l~~d-i~~l~~gd~t~ig~~g~~LSG 732 (1455)
++|+++|+--||+. ||+||+.|. ...+++..+ .-+++++|..+ .+.+| .+|||
T Consensus 80 ~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSG 148 (263)
T COG1127 80 LYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSG 148 (263)
T ss_pred HHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcc
Confidence 59999999999987 999999995 234554444 34678888877 55555 48999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEccCcccccc-CCEEEEEeCCeEEEe
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~-~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1455)
|++.|+|||||+..||+|+++|||||+|||.++..+- .++... ..-+-|+|+|||+++.+.. ||+|+++.||+|...
T Consensus 149 GM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~-~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~ 227 (263)
T COG1127 149 GMRKRVALARAIALDPELLFLDEPTSGLDPISAGVID-ELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAE 227 (263)
T ss_pred hHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHH-HHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEe
Confidence 9999999999999999999999999999999777544 434321 2236799999999998765 899999999999999
Q ss_pred cCHHHHHhc
Q 000511 811 GSSADLAVS 819 (1455)
Q Consensus 811 g~~~~l~~~ 819 (1455)
|+++|+.+.
T Consensus 228 Gt~~el~~s 236 (263)
T COG1127 228 GTPEELLAS 236 (263)
T ss_pred CCHHHHHhC
Confidence 999999764
No 306
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=341.88 Aligned_cols=200 Identities=30% Similarity=0.458 Sum_probs=169.1
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC----------c
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------S 669 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------~ 669 (1455)
..|+++|++|+|... + +|+||||++++|++++|+||||||||||+|+|+|.++|.+|+|.+.| +
T Consensus 3 ~~i~v~nl~v~y~~~---~---vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~ 76 (254)
T COG1121 3 PMIEVENLTVSYGNR---P---VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLR 76 (254)
T ss_pred cEEEEeeeEEEECCE---e---eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCe
Confidence 358999999999742 2 49999999999999999999999999999999999999999999865 5
Q ss_pred EEEEcCCC---CCCCcCHHHHhccCCCC-----------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000511 670 IAYVPQVP---WILSGTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1455)
Q Consensus 670 i~y~~Q~p---~l~~~ti~~nI~~g~~~-----------~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQk 735 (1455)
||||||.. |-|..||+|-+.+|... |.+..+++++..++. |+. ...-.+|||||+
T Consensus 77 IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~----------~r~i~~LSGGQ~ 145 (254)
T COG1121 77 IGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLR----------DRQIGELSGGQK 145 (254)
T ss_pred EEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhh----------CCcccccCcHHH
Confidence 99999964 77889999999987432 346778888888876 333 233448999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHH
Q 000511 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 814 (1455)
Q Consensus 736 qRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 814 (1455)
|||-|||||.++|++|+|||||+++|+.++..+++- +.....+|+||++|||+++.+. ++|+|+.|+ +++...|+++
T Consensus 146 QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~l-L~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~ 223 (254)
T COG1121 146 QRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDL-LKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPE 223 (254)
T ss_pred HHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChh
Confidence 999999999999999999999999999999988775 4332334899999999999876 599999995 5678899988
Q ss_pred HHHh
Q 000511 815 DLAV 818 (1455)
Q Consensus 815 ~l~~ 818 (1455)
+...
T Consensus 224 ~~~~ 227 (254)
T COG1121 224 EVLT 227 (254)
T ss_pred hccC
Confidence 8754
No 307
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.1e-37 Score=353.99 Aligned_cols=226 Identities=22% Similarity=0.365 Sum_probs=187.3
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEe-----CCCCChHH-
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN-----IINTPVRD- 1291 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~d-----i~~i~~~~- 1291 (1455)
.|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +...+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 5899999999964 358999999999999999999999999999999999999999999999988 77766553
Q ss_pred ---HhcccEEEeCCCC--C-CCCcHHHhcCc----CCCCChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000511 1292 ---LRGRFAVVPQSPF--L-FEGSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1360 (1455)
Q Consensus 1292 ---lR~~i~~VpQdp~--l-f~gTIreNLdp----~~~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQ 1360 (1455)
+++.++++||+|. + +..|+.+|+.. .......+. ...+.+.++.+|++ +..+.....|||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~q 155 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQ 155 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHcCCChhhhhcCchhcCHHHHH
Confidence 3467999999985 2 34588888732 111111111 12344566667886 5677788899999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhH
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1437 (1455)
Q Consensus 1361 rl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~e 1437 (1455)
|++|||||+++|++|||||||++||+.+.+.+.+.|++.. .+.|+|+|+|+++.+.. ||++++|++|++++.|++++
T Consensus 156 rv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~~~ 235 (253)
T TIGR02323 156 RLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLTDQ 235 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999998764 37899999999999985 89999999999999999999
Q ss_pred HhccCCcHHHHHH
Q 000511 1438 LLQDECSVFSSFV 1450 (1455)
Q Consensus 1438 Ll~~~~s~f~~l~ 1450 (1455)
+..++...|.+++
T Consensus 236 ~~~~~~~~~~~~~ 248 (253)
T TIGR02323 236 VLDDPQHPYTQLL 248 (253)
T ss_pred HhcCCCCHHHHHH
Confidence 9876655555544
No 308
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=7.9e-38 Score=351.12 Aligned_cols=212 Identities=27% Similarity=0.366 Sum_probs=173.5
Q ss_pred EEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC---CCCceEEECCEeCCCCChHHHh
Q 000511 1219 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLR 1293 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~---~~~G~I~IdG~di~~i~~~~lR 1293 (1455)
+.|+||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999765 3689999999999999999999999999999999999999 99999999999885 34678
Q ss_pred cccEEEeCCCCCCCC-cHHHhcCcCCCC-ChHHHHHHHHHhcHHH-HHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1294 GRFAVVPQSPFLFEG-SLRDNLDPFHMN-DDLKIWSVLEKCHVKE-EVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1294 ~~i~~VpQdp~lf~g-TIreNLdp~~~~-~d~ei~~aL~~~~l~~-~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
++++++||++.+|++ |++||+.+.... ......+..+.....+ .++.++++........+||+|||||++||||+++
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 160 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQLLW 160 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHHHHHHHHHHh
Confidence 899999999999987 999999743110 0000011111111122 3444466655556667899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccCh-hhH-hhhCEEEEEeCCeEEEeC
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRI-STV-LNMDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl-~ti-~~~DrI~vl~~G~ive~G 1433 (1455)
+|+++||||||++||+.+.+.+.+.|++.. +++|+|++||++ +.+ ..||+|++|++|++++.|
T Consensus 161 ~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 161 DPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999998764 478999999998 455 558999999999999876
No 309
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=368.70 Aligned_cols=212 Identities=24% Similarity=0.377 Sum_probs=181.0
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCC----ChHHHhc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRDLRG 1294 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i----~~~~lR~ 1294 (1455)
|++ |++++|... .+ |+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +....|+
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 23 99999999999999999999999999999999999999999999998653 2445688
Q ss_pred ccEEEeCCCCCCCC-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1295 RFAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1295 ~i~~VpQdp~lf~g-TIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
+++|+||++.+|+. |+++|+.+... ..++++.++ ++.+|++........+||||||||++|||||+++|
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~---------l~~~gl~~~~~~~~~~LSgGq~qRvalaraL~~~p 147 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKI---------VALLGIEPLLDRYPGSLSGGEKQRVAIGRALLTAP 147 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHH---------HHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999974 99999975422 122333333 44446666566667789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCc
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1444 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s 1444 (1455)
++||||||||+||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++..
T Consensus 148 ~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~ 222 (352)
T PRK11144 148 ELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAM 222 (352)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcch
Confidence 99999999999999999999999987653 6899999999998866 899999999999999999999988753
No 310
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.6e-37 Score=355.11 Aligned_cols=213 Identities=38% Similarity=0.661 Sum_probs=191.5
Q ss_pred CCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcCcEEEEcCC
Q 000511 597 SKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQV 676 (1455)
Q Consensus 597 ~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~ 676 (1455)
+....++++|+++.+ . ++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++|.++|++|+
T Consensus 35 ~~~~~l~i~nls~~~-----~---~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~ 106 (282)
T cd03291 35 SDDNNLFFSNLCLVG-----A---PVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQF 106 (282)
T ss_pred CCCCeEEEEEEEEec-----c---cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCc
Confidence 345678999999852 1 25999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCC
Q 000511 677 PWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDV 756 (1455)
Q Consensus 677 p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep 756 (1455)
+++++.|++||+.++..+++.++.+.++++++...+..+|.+.++.+++++.+||||||||++||||++++|+++|||||
T Consensus 107 ~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEP 186 (282)
T cd03291 107 SWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSP 186 (282)
T ss_pred ccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 99999999999998765566677788888899888999999999999999999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHh
Q 000511 757 LSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 757 ~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
|++||+.+.+.+.+.++.. +.+++|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 187 t~gLD~~~~~~l~~~ll~~-~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 247 (282)
T cd03291 187 FGYLDVFTEKEIFESCVCK-LMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQS 247 (282)
T ss_pred CccCCHHHHHHHHHHHHHH-hhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999988887753322 345789999999999998899999999999999999988754
No 311
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=354.74 Aligned_cols=205 Identities=28% Similarity=0.360 Sum_probs=172.9
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 4699999999999999999999999999999999999999999999999998642 346899
Q ss_pred EeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||++.+|+ .|+++|+.... .....+. .....+.++.+|++........+||||||||++||||++++|++
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~l 149 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQR-----LEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQL 149 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHH-----HHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999887 59999996431 1121111 11223444555666656666778999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEe--CCeEEEeCCh
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILD--HGHLVEQGNP 1435 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~--~G~ive~G~p 1435 (1455)
|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|+ +|++++.+++
T Consensus 150 llLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 150 LLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999998863 38999999999999865 89999998 5999998764
No 312
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-38 Score=328.37 Aligned_cols=205 Identities=25% Similarity=0.341 Sum_probs=173.4
Q ss_pred CceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC-----cEEEEcC-----
Q 000511 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH-----GSIHASG----- 668 (1455)
Q Consensus 599 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~-----G~i~~~~----- 668 (1455)
...++++|.++.|.. ..+|+|||++|+++++++++|||||||||||+++.+..+..+ |+|.++|
T Consensus 5 ~~~~~~~~l~~yYg~------~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~ 78 (253)
T COG1117 5 IPAIEVRDLNLYYGD------KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYD 78 (253)
T ss_pred cceeEecceeEEECc------hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccC
Confidence 356889999998863 235999999999999999999999999999999998877765 8998876
Q ss_pred ----------cEEEEcCCCCCCCcCHHHHhccCCCC---C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000511 669 ----------SIAYVPQVPWILSGTIRDNILFGKNY---D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1455)
Q Consensus 669 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~~---~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LS 731 (1455)
+||.|+|.|.-|..||.|||.+|... . ++..++.++.++|.+... ....+.+..||
T Consensus 79 ~~~d~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVK-------DrL~~sa~~LS 151 (253)
T COG1117 79 PKVDVVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVK-------DRLHKSALGLS 151 (253)
T ss_pred CCCCHHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhH-------HHhhCCccCCC
Confidence 59999999999999999999998532 1 234666777777766554 23456788999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEe
Q 000511 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1455)
Q Consensus 732 GGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1455)
|||+||++||||+.-+|+|+|||||||||||.+..+|-+. +.. +.++-|+|+|||+++.... +|+...+-+|+++|.
T Consensus 152 GGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeL-i~e-Lk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~ 229 (253)
T COG1117 152 GGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEEL-ITE-LKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEF 229 (253)
T ss_pred hhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHH-HHH-HHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEE
Confidence 9999999999999999999999999999999988887765 433 5556699999999998765 899999999999999
Q ss_pred cCHHHHHh
Q 000511 811 GSSADLAV 818 (1455)
Q Consensus 811 g~~~~l~~ 818 (1455)
|+.+++-.
T Consensus 230 g~T~~iF~ 237 (253)
T COG1117 230 GPTDKIFT 237 (253)
T ss_pred cCHHhhhc
Confidence 99888743
No 313
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.3e-38 Score=317.17 Aligned_cols=198 Identities=29% Similarity=0.407 Sum_probs=170.3
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------cE
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 670 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 670 (1455)
+.++++.|+|... + -..+++|++||+++|+|||||||||||++|.|+..|.+|+|.++| .+
T Consensus 2 l~L~~V~~~y~~~---~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPV 73 (231)
T COG3840 2 LALDDVRFSYGHL---P-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPV 73 (231)
T ss_pred ccccceEEeeCcc---e-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCCh
Confidence 3567788888642 2 246799999999999999999999999999999999999999987 48
Q ss_pred EEEcCCCCCCCc-CHHHHhccCCC-------CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHH
Q 000511 671 AYVPQVPWILSG-TIRDNILFGKN-------YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 742 (1455)
Q Consensus 671 ~y~~Q~p~l~~~-ti~~nI~~g~~-------~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalAR 742 (1455)
+.++|+..||.- ||++||-+|.. .+.++.+.++...+|....+.+|. +|||||||||||||
T Consensus 74 SmlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALAR 142 (231)
T COG3840 74 SMLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALAR 142 (231)
T ss_pred hhhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHH
Confidence 999999999976 99999999853 245677888888899888888885 89999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHHHhc
Q 000511 743 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVS 819 (1455)
Q Consensus 743 aly~~~~illlDep~s~lD~~~~~~i~~~~~~~~-~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1455)
++.++.+|++||||||||||.-......- +... ..++.|+++|||+++.+.. +|+++++++|+|.++|+.+++...
T Consensus 143 clvR~~PilLLDEPFsALdP~LR~eMl~L-v~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 143 CLVREQPILLLDEPFSALDPALRAEMLAL-VSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HHhccCCeEEecCchhhcCHHHHHHHHHH-HHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 99999999999999999999987776654 2221 3457799999999998775 999999999999999999887643
No 314
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.8e-38 Score=358.37 Aligned_cols=203 Identities=32% Similarity=0.412 Sum_probs=174.4
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------c
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 669 (1455)
.++++|++..|... . +++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++| .
T Consensus 3 ~i~l~~v~K~yg~~-----~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~ 76 (338)
T COG3839 3 ELELKNVRKSFGSF-----E-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRG 76 (338)
T ss_pred EEEEeeeEEEcCCc-----e-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCC
Confidence 47899999998642 1 49999999999999999999999999999999999999999999987 5
Q ss_pred EEEEcCCCCCCCc-CHHHHhccCCCCC-------HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 670 IAYVPQVPWILSG-TIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 670 i~y~~Q~p~l~~~-ti~~nI~~g~~~~-------~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
||+|+|+.-|+.- ||+|||.||.... +++.+++.+..++++-++..| ..||||||||||||
T Consensus 77 iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAla 145 (338)
T COG3839 77 IAMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALA 145 (338)
T ss_pred EEEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHH
Confidence 9999999999865 9999999986542 457778888888887776554 58999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHHHhcc
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVSL 820 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~~ 820 (1455)
||+.++|+++|||||+|+||++....+-..+..-....+.|+|.|||+..... .||+|++|++|+|.+.|++.|+....
T Consensus 146 RAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 146 RALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 99999999999999999999998777665522111233679999999987755 59999999999999999999997543
No 315
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.4e-37 Score=355.14 Aligned_cols=229 Identities=25% Similarity=0.402 Sum_probs=185.0
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCC---CceEEECCEeCCCC-----Ch
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC---GGQILVDGLNIINT-----PV 1289 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~---~G~I~IdG~di~~i-----~~ 1289 (1455)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 5899999999963 46999999999999999999999999999999999999986 49999999998654 24
Q ss_pred HHHhcccEEEeCCCCCCCC-cHHHhcCcCCCC-ChH-----HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000511 1290 RDLRGRFAVVPQSPFLFEG-SLRDNLDPFHMN-DDL-----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1455)
Q Consensus 1290 ~~lR~~i~~VpQdp~lf~g-TIreNLdp~~~~-~d~-----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1455)
..+|++++|+||++.+|++ |+++|+...... .+. .....-.+....+.++.+|++.........||+|||||+
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv 161 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRV 161 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCccccCHHHHHHH
Confidence 5678899999999998875 999999643110 000 000000011223444455666556667778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHh
Q 000511 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1363 ~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
+||||++.+|++|||||||++||.++.+.+.+.|++.. +++|||+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 162 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~- 240 (262)
T PRK09984 162 AIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQF- 240 (262)
T ss_pred HHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHh-
Confidence 99999999999999999999999999999999998864 3789999999999865 4899999999999999999997
Q ss_pred ccCCcHHHHHHH
Q 000511 1440 QDECSVFSSFVR 1451 (1455)
Q Consensus 1440 ~~~~s~f~~l~~ 1451 (1455)
.+ ....+++.
T Consensus 241 ~~--~~~~~~~~ 250 (262)
T PRK09984 241 DN--ERFDHLYR 250 (262)
T ss_pred cc--HHHHHHHh
Confidence 32 24555554
No 316
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.9e-37 Score=344.79 Aligned_cols=201 Identities=22% Similarity=0.372 Sum_probs=171.0
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++||+++|+. .++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ..|++++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999962 578999999999999999999999999999999999999999999999987654 46788999
Q ss_pred EeCCCCCCCC-cHHHhcCcC-CC-C-----ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1299 VPQSPFLFEG-SLRDNLDPF-HM-N-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~-~~-~-----~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
+||+|.+|.+ |++||+... .. . .++++.++++.. |++........+||+|||||++||||+++
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrl~laral~~ 145 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQV---------GIADYLDRLPEQLSGGQRQRVALARCLVR 145 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHc---------CcHHHhhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999875 999998632 11 1 122333344444 55444555556899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCC
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1434 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1434 (1455)
+|+|+||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|.
T Consensus 146 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 146 PNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999998864 37899999999999875 89999999999999874
No 317
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.2e-37 Score=336.88 Aligned_cols=195 Identities=28% Similarity=0.369 Sum_probs=160.0
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|++-.|...... ..+|+++||+|++||+++|+|||||||||||+.|.|...|++|.|.++|
T Consensus 2 i~~~~v~k~y~~~~~~--~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~ 79 (226)
T COG1136 2 IELKNVSKIYGLGGEK--VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAK 79 (226)
T ss_pred cEEeeeEEEeccCCcc--eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHH
Confidence 3567777777654322 3569999999999999999999999999999999999999999999986
Q ss_pred ----cEEEEcCCCCCCCc-CHHHHhccC----CCCC---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHH
Q 000511 669 ----SIAYVPQVPWILSG-TIRDNILFG----KNYD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 736 (1455)
Q Consensus 669 ----~i~y~~Q~p~l~~~-ti~~nI~~g----~~~~---~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkq 736 (1455)
.|||++|+..|... |++|||.+. .... .++..+.++..+|.+... ......|||||||
T Consensus 80 ~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQ 149 (226)
T COG1136 80 LRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQ 149 (226)
T ss_pred HHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHH
Confidence 49999999987654 999999853 2221 345555666666654433 2345689999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEE
Q 000511 737 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1455)
Q Consensus 737 RvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1455)
|||||||++.+|++++.||||.+||.++++.+++.+......+|+|+|+|||+......|||++.|+||++.
T Consensus 150 RVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 150 RVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999999999999863322134578999999999999999999999999854
No 318
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2e-37 Score=369.01 Aligned_cols=215 Identities=23% Similarity=0.365 Sum_probs=182.2
Q ss_pred EEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCC----hHHHhcccEE
Q 000511 1223 NVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP----VRDLRGRFAV 1298 (1455)
Q Consensus 1223 nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~----~~~lR~~i~~ 1298 (1455)
|++++|+.. .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|+++++
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 899999642 35 999999999999999999999999999999999999999999999986542 3456889999
Q ss_pred EeCCCCCCCC-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1376 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILl 1376 (1455)
+||++.+|++ |++||+.+... ....+. +....+.++.+|++...+.....||||||||++|||||+++|++||
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~-----~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lll 154 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSER-----RISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLL 154 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHH-----HHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999986 99999975322 111111 1123344555577777777778999999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHH
Q 000511 1377 LDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1446 (1455)
Q Consensus 1377 LDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f 1446 (1455)
|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 155 LDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 227 (354)
T TIGR02142 155 MDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPW 227 (354)
T ss_pred EcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCccc
Confidence 9999999999999999999987643 7899999999999876 89999999999999999999998776544
No 319
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.2e-37 Score=348.10 Aligned_cols=206 Identities=25% Similarity=0.347 Sum_probs=176.5
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH---HHh
Q 000511 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1293 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~---~lR 1293 (1455)
++++|++++|+++. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996432 5699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cccEEEeCCCCCCC-CcHHHhcCcCCC----CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1294 GRFAVVPQSPFLFE-GSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1294 ~~i~~VpQdp~lf~-gTIreNLdp~~~----~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
+.++|+||+|.+|. .|+.+|+.+... .+.++..+ ...+.++.+|++........+||+|||||++||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~laral 156 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARE-----RARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIARAL 156 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHH
Confidence 89999999999987 699999975321 12222211 223455556777667777778999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhhCEEEEEeCCeE
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHL 1429 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~i 1429 (1455)
+++|++|||||||++||.++.+.+.+.|++.. .++|+|+|+|+++....||+|++|++|++
T Consensus 157 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 157 VHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999998765 37999999999998777999999999986
No 320
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.1e-37 Score=348.11 Aligned_cols=212 Identities=29% Similarity=0.449 Sum_probs=185.2
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|+++.|.... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 1 i~~~~l~~~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (237)
T cd03252 1 ITFEHVRFRYKPDG----PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRR 76 (237)
T ss_pred CEEEEEEEecCCCC----ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhh
Confidence 36789999985321 2359999999999999999999999999999999999999999999876
Q ss_pred cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccC
Q 000511 669 SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 747 (1455)
Q Consensus 669 ~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 747 (1455)
.++|++|++++++.|++||+.++.. ...++..+.++..++.+-++.+|.|.++..+..+.+|||||||||+||||++.+
T Consensus 77 ~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~ 156 (237)
T cd03252 77 QVGVVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHN 156 (237)
T ss_pred cEEEEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhC
Confidence 3899999999999999999988643 344455556666777777888998988888899999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHhc
Q 000511 748 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 819 (1455)
Q Consensus 748 ~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1455)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 157 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (237)
T cd03252 157 PRILIFDEATSALDYESEHAIMRN-MHD-ICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE 226 (237)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc
Confidence 999999999999999999988876 433 3457899999999999988999999999999999999887654
No 321
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-37 Score=330.27 Aligned_cols=171 Identities=44% Similarity=0.760 Sum_probs=161.9
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|+...+++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999997543469999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000511 1299 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1455)
Q Consensus 1299 VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLD 1378 (1455)
+||+|.+|+.|++||+ ||+|||||++||||++++|++||||
T Consensus 81 ~~~~~~~~~~t~~e~l---------------------------------------LS~G~~~rl~la~al~~~p~llllD 121 (171)
T cd03228 81 VPQDPFLFSGTIRENI---------------------------------------LSGGQRQRIAIARALLRDPPILILD 121 (171)
T ss_pred EcCCchhccchHHHHh---------------------------------------hCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999997 9999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCe
Q 000511 1379 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGH 1428 (1455)
Q Consensus 1379 EaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1428 (1455)
|||++||.++.+.+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 122 EP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 122 EATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred CCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 99999999999999999988767899999999999998899999999985
No 322
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.8e-38 Score=322.71 Aligned_cols=225 Identities=24% Similarity=0.388 Sum_probs=195.3
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH-hcc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGR 1295 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l-R~~ 1295 (1455)
+.+..+|+..+|.. .+|+++|||+|++||.||+.||+||||||.+.++.|+..|++|+|.+||.||+.+|.+.- |-.
T Consensus 3 ~~L~a~~l~K~y~k--r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKK--RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCC--eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 46788999999964 479999999999999999999999999999999999999999999999999999998863 445
Q ss_pred cEEEeCCCCCCCC-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1296 FAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1296 i~~VpQdp~lf~g-TIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
|+|+||||.+|.+ ||+|||..--+..+.+.+.+-++..+.+.++.+++...-...|..||||||+|+-|||||..+|+.
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~f 160 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAANPKF 160 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhcCCCE
Confidence 9999999999987 999999644333222233344555566667777777777788889999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChh-hHhhhCEEEEEeCCeEEEeCChhHHhccCC
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIS-TVLNMDEILILDHGHLVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~-ti~~~DrI~vl~~G~ive~G~p~eLl~~~~ 1443 (1455)
++||||.+++|+-+-..||+.|+... +|--|++.-|... |+.-|||.+++.+|+|...|+|+|+.+++.
T Consensus 161 iLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~~ 231 (243)
T COG1137 161 ILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNED 231 (243)
T ss_pred EEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcChh
Confidence 99999999999999999999998764 5778999999976 666799999999999999999999999864
No 323
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-37 Score=357.71 Aligned_cols=204 Identities=27% Similarity=0.389 Sum_probs=174.4
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|++-+|.. ..+++|+||+|++||++++.|||||||||+|++|+|+.+|++|+|.++|
T Consensus 4 ~~l~i~~v~k~yg~------~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR 77 (352)
T COG3842 4 PALEIRNVSKSFGD------FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKR 77 (352)
T ss_pred ceEEEEeeeeecCC------eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhc
Confidence 46899999999862 2359999999999999999999999999999999999999999999987
Q ss_pred cEEEEcCCCCCCC-cCHHHHhccCCCC----C-H---HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000511 669 SIAYVPQVPWILS-GTIRDNILFGKNY----D-P---QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1455)
Q Consensus 669 ~i~y~~Q~p~l~~-~ti~~nI~~g~~~----~-~---~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 739 (1455)
.|++|+|+--||. .||+|||.||... . + +++.++++..+|..-- ..+...||||||||||
T Consensus 78 ~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~-----------~R~p~qLSGGQqQRVA 146 (352)
T COG3842 78 PIGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFA-----------DRKPHQLSGGQQQRVA 146 (352)
T ss_pred ccceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhh-----------hhChhhhChHHHHHHH
Confidence 5999999999986 5999999999652 2 2 3677777777776533 3456799999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccc-cccCCEEEEEeCCeEEEecCHHHHHh
Q 000511 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 740 lARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
|||||..+|+++|||||+||||.+..+++-..+.......|.|.|+|||+.+. +..+|+|.+|++|+|...|+++|+..
T Consensus 147 LARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~ 226 (352)
T COG3842 147 LARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYE 226 (352)
T ss_pred HHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhh
Confidence 99999999999999999999999988887666332223347899999999876 66799999999999999999999965
Q ss_pred cc
Q 000511 819 SL 820 (1455)
Q Consensus 819 ~~ 820 (1455)
..
T Consensus 227 ~P 228 (352)
T COG3842 227 RP 228 (352)
T ss_pred Cc
Confidence 43
No 324
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=5.8e-37 Score=343.51 Aligned_cols=204 Identities=31% Similarity=0.407 Sum_probs=174.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ++++++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 478999999964 46999999999999999999999999999999999999999999999999876422 357999
Q ss_pred EeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||++.+|. .|+++|+.+.. ..+++++.++++.. |++........+||+|||||++||||++++|++
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~~rv~laral~~~p~l 145 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIV---------DLTNTGKKKAKQFSLGMKQRLGIAIALLNHPKL 145 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHc---------CCcHHHhhhHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998886 59999986421 22334444445444 454444445567999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhH
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1437 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~e 1437 (1455)
|+|||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||||++|++|++++.|++.+
T Consensus 146 lllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 146 LILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred EEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999999999998764 47899999999999865 89999999999999999876
No 325
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-37 Score=338.85 Aligned_cols=201 Identities=30% Similarity=0.406 Sum_probs=168.3
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
|.+++.+..|.. ..+++|||++|+.||++++.|||||||||||++|+|...|++|.|.++|
T Consensus 3 i~i~~~~~~~~~------~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~ 76 (345)
T COG1118 3 IRINNVKKRFGA------FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRD 76 (345)
T ss_pred eeehhhhhhccc------ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhh
Confidence 556666666653 2348999999999999999999999999999999999999999999987
Q ss_pred -cEEEEcCCCCCCC-cCHHHHhccCCCCC---------HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 -SIAYVPQVPWILS-GTIRDNILFGKNYD---------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~-~ti~~nI~~g~~~~---------~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
+||||.|+.-+|. .||.|||.||.+.. ..+..+.++.|.|+.--+ .....||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~-----------ryP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLAD-----------RYPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhh-----------cCchhcChHHHHH
Confidence 5999999999885 59999999996322 245667788888865333 3456899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSAD 815 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~ 815 (1455)
|||||||..+|++|||||||+|||++..+.+-+.+. .-.. .|.|+++|||+.++.. .||+|++|++|+|...|+++|
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr-~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~e 224 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLR-KLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDE 224 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHH-HHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHH
Confidence 999999999999999999999999999887766632 2122 3679999999998854 599999999999999999999
Q ss_pred HHhcc
Q 000511 816 LAVSL 820 (1455)
Q Consensus 816 l~~~~ 820 (1455)
+....
T Consensus 225 v~~~P 229 (345)
T COG1118 225 VYDHP 229 (345)
T ss_pred HhcCC
Confidence 96543
No 326
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-37 Score=343.65 Aligned_cols=211 Identities=28% Similarity=0.440 Sum_probs=187.6
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|+++.|... .++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~-----~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (229)
T cd03254 2 EIEFENVNFSYDEK-----KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLR 76 (229)
T ss_pred eEEEEEEEEecCCC-----CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHh
Confidence 47899999998531 1359999999999999999999999999999999999999999999875
Q ss_pred -cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHcc
Q 000511 669 -SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 746 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 746 (1455)
.++|++|+|+++++|++||+.++.+ ...++..+.++.++++..++.+|.|.++..+....+|||||||||+||||+++
T Consensus 77 ~~i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~ 156 (229)
T cd03254 77 SMIGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLR 156 (229)
T ss_pred hhEEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 3899999999999999999998754 34556777788889988899999999999999999999999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHh
Q 000511 747 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 747 ~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.++.||++++|++|++.+.|+.+++..
T Consensus 157 ~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 157 DPKILILDEATSNIDTETEKLIQEA-LEK-LMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 9999999999999999999988776 443 345789999999999988899999999999999998887754
No 327
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-37 Score=328.87 Aligned_cols=170 Identities=32% Similarity=0.562 Sum_probs=157.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGK--KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 478999999964 36999999999999999999999999999999999999999999999999998766 677889999
Q ss_pred EeCCCCCCCC-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000511 1299 VPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1377 (1455)
Q Consensus 1299 VpQdp~lf~g-TIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlL 1377 (1455)
+||+|.+|.+ |+++|+. ||+|||||++||||++++|+|++|
T Consensus 78 ~~q~~~~~~~~tv~~~~~--------------------------------------LS~G~~qrv~laral~~~p~illl 119 (173)
T cd03230 78 LPEEPSLYENLTVRENLK--------------------------------------LSGGMKQRLALAQALLHDPELLIL 119 (173)
T ss_pred EecCCccccCCcHHHHhh--------------------------------------cCHHHHHHHHHHHHHHcCCCEEEE
Confidence 9999999887 9999973 999999999999999999999999
Q ss_pred eccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeE
Q 000511 1378 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1429 (1455)
Q Consensus 1378 DEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1429 (1455)
||||++||..+.+.+.+.|++.. ++.|+|++||+.+.+.. ||+|++|++|++
T Consensus 120 DEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 120 DEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 99999999999999999998764 46899999999999884 899999999974
No 328
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=338.38 Aligned_cols=224 Identities=27% Similarity=0.456 Sum_probs=180.5
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC-C----CCceEEECCEeCCCCChHH
Q 000511 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-I----CGGQILVDGLNIINTPVRD 1291 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~-~----~~G~I~IdG~di~~i~~~~ 1291 (1455)
++++|++..|.... ..+++||||+|++||.+||||.|||||||+.++++|+++ | .+|+|.+||.|+.+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 68899999997543 468999999999999999999999999999999999998 3 6799999999999999875
Q ss_pred H---h-cccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHh-----------cHHHHHHhCCCch---hhhcCCCC
Q 000511 1292 L---R-GRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKC-----------HVKEEVEAVGLET---FVKESGIS 1353 (1455)
Q Consensus 1292 l---R-~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~-----------~l~~~i~~lgLdt---~v~e~G~~ 1353 (1455)
+ | +.|++|||||. .-|+|.... .+++.++++.- ...+.++..|++. .+..-...
T Consensus 82 ~~~iRG~~I~mIfQ~p~-------~sLnPv~~I-g~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPM-------TSLNPVMTI-GDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCch-------hhcCChhhH-HHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcc
Confidence 4 3 47999999995 112222111 11222222210 0112222235543 45666778
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEE
Q 000511 1354 FSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLV 1430 (1455)
Q Consensus 1354 LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv 1430 (1455)
||||||||+.||-|++.+|++||-||||++||..+.+.|.+.|++.. .+.|+|+|||++..+.. ||||+||.+|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 99999999999999999999999999999999999999999998765 48999999999998876 8999999999999
Q ss_pred EeCChhHHhccCCcHHHHHH
Q 000511 1431 EQGNPQTLLQDECSVFSSFV 1450 (1455)
Q Consensus 1431 e~G~p~eLl~~~~s~f~~l~ 1450 (1455)
|.|+.+++++++...|.+.+
T Consensus 234 E~g~~~~i~~~P~HPYT~~L 253 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGL 253 (316)
T ss_pred EeCCHHHHhcCCCChHHHHH
Confidence 99999999999987776544
No 329
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.4e-36 Score=347.29 Aligned_cols=214 Identities=27% Similarity=0.359 Sum_probs=191.0
Q ss_pred CceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC----------
Q 000511 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1455)
Q Consensus 599 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 668 (1455)
...++++|+++.|+.. . ..+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 17 ~~~i~~~~l~~~~~~~-~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~ 92 (257)
T cd03288 17 GGEIKIHDLCVRYENN-L---KPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHT 92 (257)
T ss_pred CceEEEEEEEEEeCCC-C---CcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHH
Confidence 4679999999999642 1 2359999999999999999999999999999999999999999999865
Q ss_pred ---cEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHc
Q 000511 669 ---SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 745 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly 745 (1455)
.++||+|+|+++++|++||+........+.+.++++..++...++.+|.|.++.+++.+.+||||||||++||||++
T Consensus 93 ~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 93 LRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred HhhhEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 48999999999999999999866444556677788888998889999999999999999999999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHh
Q 000511 746 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 746 ~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
++|++++|||||++||+++.+.+.+. +.. +.+++|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~-l~~-~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 243 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKV-VMT-AFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLA 243 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHH-HHH-hcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999988877765 433 345789999999999998899999999999999999988754
No 330
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-37 Score=329.69 Aligned_cols=172 Identities=33% Similarity=0.510 Sum_probs=159.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCC--hHHHhccc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--VRDLRGRF 1296 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~--~~~lR~~i 1296 (1455)
|+++|++++|+. .++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 46999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~IL 1375 (1455)
+|+||+|.+|.+ |++||+... ||+|||||++||||++++|+++
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~------------------------------------lS~G~~qr~~la~al~~~p~ll 122 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG------------------------------------LSGGQQQRVALARALAMDPDVL 122 (178)
T ss_pred EEEecCCccCCCCCHHHheeec------------------------------------CCHHHHHHHHHHHHHHCCCCEE
Confidence 999999998865 999998643 9999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCe
Q 000511 1376 CLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGH 1428 (1455)
Q Consensus 1376 lLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1428 (1455)
||||||++||..+.+.+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 123 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 123 LLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 99999999999999999999987654 6899999999999985 89999999985
No 331
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=9.7e-37 Score=335.28 Aligned_cols=185 Identities=23% Similarity=0.353 Sum_probs=164.0
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcC--CCCCCceEEECCEeCCCCChHHH-hcc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL--TPICGGQILVDGLNIINTPVRDL-RGR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl--~~~~~G~I~IdG~di~~i~~~~l-R~~ 1295 (1455)
++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999963 4699999999999999999999999999999999999 58999999999999998876654 556
Q ss_pred cEEEeCCCCCCCC-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1296 FAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1296 i~~VpQdp~lf~g-TIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
++|+||+|.+|++ |+++|++ ....+||+|||||++||||++++|+|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~---------------------------------~~~~~LS~G~~qrv~laral~~~p~i 125 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR---------------------------------YVNEGFSGGEKKRNEILQLLLLEPDL 125 (200)
T ss_pred EEEeecChhhccCccHHHHHh---------------------------------hccccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999886 5666550 01136999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh--hhCEEEEEeCCeEEEeCChhHHh
Q 000511 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL--NMDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~--~~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
++|||||++||..+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.| +.|+.
T Consensus 126 lllDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 126 AILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999998764 3789999999999998 58999999999999999 55564
No 332
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-37 Score=340.45 Aligned_cols=203 Identities=26% Similarity=0.391 Sum_probs=171.1
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCC----ChHHHhcc
Q 000511 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRDLRGR 1295 (1455)
Q Consensus 1220 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i----~~~~lR~~ 1295 (1455)
++ |++++|+.. .+ |+||+|++ |++||+|+||||||||+++|.|+++|++|+|.+||.++... +....|++
T Consensus 3 ~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 76 (214)
T cd03297 3 CV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRK 76 (214)
T ss_pred ee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhc
Confidence 45 899999753 34 99999999 99999999999999999999999999999999999998643 34467889
Q ss_pred cEEEeCCCCCCCC-cHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1296 FAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1296 i~~VpQdp~lf~g-TIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
++|+||++.+|++ |+++|+..... ..+++ .+....+.++.+|++.........||||||||++||||++++|+
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 151 (214)
T cd03297 77 IGLVFQQYALFPHLNVRENLAFGLKRKRNRE-----DRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQPE 151 (214)
T ss_pred EEEEecCCccCCCCCHHHHHHHHHhhCCHHH-----HHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999864 99999975321 11111 11223445555677776777778999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
|+||||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 152 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 152 LLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999987643 7899999999999865 8999999999999876
No 333
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.5e-36 Score=339.80 Aligned_cols=206 Identities=32% Similarity=0.443 Sum_probs=184.8
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|+++.|+... +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 77 (221)
T cd03244 2 DIEFKNVSLRYRPNL----PPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLR 77 (221)
T ss_pred cEEEEEEEEecCCCC----cccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHh
Confidence 368999999996421 2359999999999999999999999999999999999999999998865
Q ss_pred -cEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccC
Q 000511 669 -SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 747 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 747 (1455)
.++|++|+|.+++.|++|||.+....+.++..+.++..++.+.+..+|.|.++..++.+.+||||||||++||||++.+
T Consensus 78 ~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~ 157 (221)
T cd03244 78 SRISIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRK 157 (221)
T ss_pred hhEEEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999987666667777888888999988999999999999999999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecC
Q 000511 748 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 812 (1455)
Q Consensus 748 ~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 812 (1455)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 158 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 158 SKILVLDEATASVDPETDALIQKT-IRE-AFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999998888776 433 344689999999999998899999999999988765
No 334
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-36 Score=335.54 Aligned_cols=190 Identities=24% Similarity=0.340 Sum_probs=162.2
Q ss_pred cEEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCC---CCCceEEECCEeCCCCChHHH
Q 000511 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDL 1292 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~---~~~G~I~IdG~di~~i~~~~l 1292 (1455)
.+.++||+|.|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 47899999999753 4579999999999999999999999999999999999999 89999999999998765 457
Q ss_pred hcccEEEeCCCCCCCC-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000511 1293 RGRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1455)
Q Consensus 1293 R~~i~~VpQdp~lf~g-TIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~ 1371 (1455)
|++++|+||++.+|.+ |+++|+...... . . .+....||+|||||++||||++++
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~------------~----~~~~~~LS~Ge~qrl~laral~~~ 136 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K------------G----NEFVRGISGGERKRVSIAEALVSR 136 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c------------c----ccchhhCCHHHHHHHHHHHHHhhC
Confidence 8899999999988875 999999643110 0 1 223346999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEec-cChhhHh-hhCEEEEEeCCeEEEeC
Q 000511 1372 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIA-HRISTVL-NMDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1372 ~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~Ia-Hrl~ti~-~~DrI~vl~~G~ive~G 1433 (1455)
|++|||||||++||+++.+.+.+.|++..+ +.|+|+++ |+.+.+. .||+|++|++|++++.|
T Consensus 137 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 137 ASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999988653 56766655 5556664 58999999999998865
No 335
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2e-36 Score=343.77 Aligned_cols=209 Identities=26% Similarity=0.408 Sum_probs=177.5
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 4899999999964 3699999999999999999999999999999999999999999999987 35799
Q ss_pred EEeCCCCCCC---CcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1298 VVPQSPFLFE---GSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1298 ~VpQdp~lf~---gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
|+||+|.++. .|+++|+......+++++.++++.+++.+. .......||+|||||++||||++++|++
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~---------~~~~~~~LSgGq~qrv~laral~~~p~l 141 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHL---------IDAPMQKLSGGETQRVLLARALLNRPQL 141 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHH---------HhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999998765 389999754333345566666666665443 3344567999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHHHHHHH
Q 000511 1375 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFVR 1451 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~~ 1451 (1455)
|||||||++||..+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++ ++++.|+++++.++ ..|.+++.
T Consensus 142 llLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~~--~~~~~~~~ 218 (251)
T PRK09544 142 LVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSLH--PEFISMFG 218 (251)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhCC--HHHHHHhC
Confidence 999999999999999999999987643 7899999999999865 899999964 79999999998753 35666653
No 336
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-36 Score=342.44 Aligned_cols=212 Identities=32% Similarity=0.487 Sum_probs=187.0
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|+++.|.... .++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 1 i~~~~l~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (234)
T cd03251 1 VEFKNVTFRYPGDG----PPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRR 76 (234)
T ss_pred CEEEEEEEEeCCCC----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHh
Confidence 35788999885321 2359999999999999999999999999999999999999999999875
Q ss_pred cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccC
Q 000511 669 SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 747 (1455)
Q Consensus 669 ~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 747 (1455)
.++|++|+|++++.|++||+.++.. ++++.+.+.++.+.+.+.++.+|.|.++..+....+||||||||++||||++.+
T Consensus 77 ~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 156 (234)
T cd03251 77 QIGLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKD 156 (234)
T ss_pred hEEEeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcC
Confidence 3899999999999999999998743 455667777788888888999998888889999999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHhc
Q 000511 748 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 819 (1455)
Q Consensus 748 ~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1455)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.++.||++++|++|++++.|+.+++...
T Consensus 157 p~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 157 PPILILDEATSALDTESERLVQAA-LER-LMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred CCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 999999999999999999988776 433 3457899999999999988999999999999999998887644
No 337
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-36 Score=348.06 Aligned_cols=209 Identities=25% Similarity=0.375 Sum_probs=172.4
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...+++++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceEE
Confidence 58999999999633 469999999999999999999999999999999999999999999999998752 12234699
Q ss_pred EEeCCCCC---CCCcHHHhcCcCCC--------C---ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000511 1298 VVPQSPFL---FEGSLRDNLDPFHM--------N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1455)
Q Consensus 1298 ~VpQdp~l---f~gTIreNLdp~~~--------~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1455)
|+||+|.+ +..++++|+..... . .++++.++++.. |++.........||||||||++
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------gl~~~~~~~~~~LSgG~~qrv~ 152 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARV---------DMVEFRHRQIGELSGGQKKRVF 152 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHc---------CChhHhcCCcccCCHHHHHHHH
Confidence 99999865 45689999853210 0 112233334443 5544445555679999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1364 LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
||||++++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+++++ +|++++.|+++++.+
T Consensus 153 laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~~ 230 (272)
T PRK15056 153 LARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTFT 230 (272)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhccC
Confidence 9999999999999999999999999999999998764 47899999999998865 8999777 899999999999864
No 338
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.2e-36 Score=329.70 Aligned_cols=172 Identities=30% Similarity=0.502 Sum_probs=156.6
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh-HHHhccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~-~~lR~~i 1296 (1455)
.++++|++++| +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +..|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 8999999999999999999999999999999999999999999999999988864 4568899
Q ss_pred EEEeCCC---CCC-CCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1297 AVVPQSP---FLF-EGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1297 ~~VpQdp---~lf-~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
+|+||++ .++ ..|++||+..... ||+|||||++||||++++|
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~----------------------------------LS~G~~qrl~la~al~~~p 123 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL----------------------------------LSGGNQQKVVLARWLARDP 123 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh----------------------------------cCHHHHHHHHHHHHHccCC
Confidence 9999995 344 5799999864310 9999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeE
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1429 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1429 (1455)
++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 124 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 124 RVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999998764 47999999999999987 899999999975
No 339
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.3e-36 Score=332.45 Aligned_cols=182 Identities=29% Similarity=0.430 Sum_probs=161.5
Q ss_pred cEEEEEEEEEecCC----CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCC--CCCCceEEECCEeCCCCChHH
Q 000511 1218 LIEFQNVTMRYKPS----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRD 1291 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~----~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~--~~~~G~I~IdG~di~~i~~~~ 1291 (1455)
.|+++||+++|+.. ..++|+|+||+|++||+++|+|++|||||||+++|.|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 58999999999752 257999999999999999999999999999999999999 9999999999999875 36
Q ss_pred HhcccEEEeCCCCCCCC-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1292 LRGRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1292 lR~~i~~VpQdp~lf~g-TIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
+|++++++||++.+|.+ |+++|+.... .. . .||+|||||++||||+++
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~~---------~----------~LS~G~~qrv~laral~~ 128 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------KL---------R----------GLSGGERKRVSIALELVS 128 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------Hh---------c----------cCCHHHHHHHHHHHHHHc
Confidence 78899999999998875 9999984210 00 0 699999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChh-hHh-hhCEEEEEeCCeEEEeC
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIS-TVL-NMDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~-ti~-~~DrI~vl~~G~ive~G 1433 (1455)
+|+++||||||++||..+.+.+.+.|++.. +++|+|+++|+++ .+. .||+|++|++|++++.|
T Consensus 129 ~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 129 NPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 999999999999999999999999998764 4899999999997 454 48999999999998765
No 340
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=336.90 Aligned_cols=203 Identities=30% Similarity=0.412 Sum_probs=174.9
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|.+|.|+.+ ..+|+|+|+++++|+.++|+|+||||||||++.+.|.++|++|.|.++|
T Consensus 3 ~i~~~~l~~~y~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~ 77 (235)
T COG1122 3 MIEAENLSFRYPGR-----KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLEL 77 (235)
T ss_pred eEEEEEEEEEcCCC-----ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHh
Confidence 47889999999754 2459999999999999999999999999999999999999999998765
Q ss_pred --cEEEEcCCC--CCCCcCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 --SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 --~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
++|||.|+| .++..||.|.|.||.. .++ ++.+++++.|++....+. ...+||||||||
T Consensus 78 ~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r-----------~p~~LSGGqkqR 146 (235)
T COG1122 78 RQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDR-----------PPFNLSGGQKQR 146 (235)
T ss_pred hcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccC-----------CccccCCcceee
Confidence 499999999 6899999999999853 333 456778888888765443 345899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1455)
||||.+|..+|++++||||||+||+...+.+++.+..-....++|+|++||+++.+.. ||++++|++|+++.+|++.++
T Consensus 147 vaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i 226 (235)
T COG1122 147 VAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEI 226 (235)
T ss_pred HHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHH
Confidence 9999999999999999999999999999998886322212336899999999999876 999999999999999999887
Q ss_pred Hhc
Q 000511 817 AVS 819 (1455)
Q Consensus 817 ~~~ 819 (1455)
.+.
T Consensus 227 ~~~ 229 (235)
T COG1122 227 FND 229 (235)
T ss_pred hhh
Confidence 643
No 341
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=340.90 Aligned_cols=209 Identities=31% Similarity=0.482 Sum_probs=184.7
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------c
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 669 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 669 (1455)
+++|+++.|+.. ..+++|+||++++|++++|+||||||||||+++|+|..+|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~ 76 (236)
T cd03253 2 EFENVTFAYDPG-----RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRA 76 (236)
T ss_pred EEEEEEEEeCCC-----CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhh
Confidence 578899988532 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCC
Q 000511 670 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 748 (1455)
Q Consensus 670 i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~ 748 (1455)
++|++|+|++++.|++||+.++.. ...+...+.++.+++...+..+|.|.++.++.+..+||||||||++||||++.+|
T Consensus 77 i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p 156 (236)
T cd03253 77 IGVVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNP 156 (236)
T ss_pred EEEECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 899999999999999999998753 3444556777888888888999999999999999999999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHh
Q 000511 749 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 749 ~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..||++++|++|++.+.|+.+++..
T Consensus 157 ~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~ 224 (236)
T cd03253 157 PILLLDEATSALDTHTEREIQAA-LRD-VSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA 224 (236)
T ss_pred CEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999998888776 333 333789999999999998899999999999999998887754
No 342
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.6e-36 Score=328.06 Aligned_cols=177 Identities=33% Similarity=0.522 Sum_probs=158.7
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000511 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1455)
Q Consensus 1220 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~V 1299 (1455)
+++||+++|+. .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 47899999964 4699999999999999999999999999999999999999999999999999988888888899999
Q ss_pred eCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000511 1300 PQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1379 (1455)
Q Consensus 1300 pQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDE 1379 (1455)
|| +++.+++. ..+...+.+||+|||||++||||++++|+++||||
T Consensus 79 ~q--------------------------~l~~~gl~---------~~~~~~~~~LS~G~~qrl~laral~~~p~llllDE 123 (180)
T cd03214 79 PQ--------------------------ALELLGLA---------HLADRPFNELSGGERQRVLLARALAQEPPILLLDE 123 (180)
T ss_pred HH--------------------------HHHHcCCH---------hHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99 44444443 33445566899999999999999999999999999
Q ss_pred cCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hhCEEEEEeCCeEEEeC
Q 000511 1380 CTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1380 aTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G 1433 (1455)
||++||.++.+.+.+.|++..+ ++|+|++||+++.+. .||++++|++|++++.|
T Consensus 124 P~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 124 PTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999987654 789999999999985 48999999999998754
No 343
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.1e-36 Score=341.17 Aligned_cols=211 Identities=30% Similarity=0.482 Sum_probs=184.6
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------c
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 669 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 669 (1455)
+++|+++.|+.... .++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 2 ~i~~l~~~~~~~~~---~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (238)
T cd03249 2 EFKNVSFRYPSRPD---VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQ 78 (238)
T ss_pred eEEEEEEecCCCCC---ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhh
Confidence 57889998864211 2359999999999999999999999999999999999999999998876 3
Q ss_pred EEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCC
Q 000511 670 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 748 (1455)
Q Consensus 670 i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~ 748 (1455)
++|++|+|++++.|++||+.++.. ...+...+.++.+++...+..+|.|.++..+....+||||||||++||||++.+|
T Consensus 79 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p 158 (238)
T cd03249 79 IGLVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNP 158 (238)
T ss_pred EEEECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCC
Confidence 999999999998999999998743 3445556677778888888899999888889999999999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHh
Q 000511 749 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 749 ~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
+++||||||++||+...+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 159 ~llllDEP~~gLD~~~~~~l~~~-l~~-~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (238)
T cd03249 159 KILLLDEATSALDAESEKLVQEA-LDR-AMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA 226 (238)
T ss_pred CEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh
Confidence 99999999999999999988776 433 236789999999999988999999999999999998877653
No 344
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-37 Score=323.08 Aligned_cols=202 Identities=25% Similarity=0.384 Sum_probs=170.0
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|++-.|+.. ..+|+||||+|++||+++|+|++||||||||++|.|..+|++|+|.++|
T Consensus 2 ~~i~~~nl~k~yp~~-----~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~l 76 (258)
T COG3638 2 MMIEVKNLSKTYPGG-----HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKEL 76 (258)
T ss_pred ceEEEeeeeeecCCC-----ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHH
Confidence 358899999999743 3459999999999999999999999999999999999999999999876
Q ss_pred -----cEEEEcCCCCCCCc-CHHHHhccCCC------------CCHHHHHHHHH---HhcchHHHhhccCCCcccccCCC
Q 000511 669 -----SIAYVPQVPWILSG-TIRDNILFGKN------------YDPQSYSETLK---ACTLDVDISLMVGGDMAYIGEKG 727 (1455)
Q Consensus 669 -----~i~y~~Q~p~l~~~-ti~~nI~~g~~------------~~~~~~~~v~~---~~~l~~di~~l~~gd~t~ig~~g 727 (1455)
+|||++|++.|.+. ||.+|++.|+- +.++....+++ ..++.+. .-.+.
T Consensus 77 r~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~-----------A~qra 145 (258)
T COG3638 77 RKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK-----------AYQRA 145 (258)
T ss_pred HHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH-----------HHHHh
Confidence 59999999998765 99999997742 33444444333 3333322 23456
Q ss_pred CccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCe
Q 000511 728 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQ 806 (1455)
Q Consensus 728 ~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~ 806 (1455)
.+|||||+|||+|||||+++|+|+|-|||+++|||.+++++++.+..-....|.|+|+.-|++++.. +||||+-|++|+
T Consensus 146 ~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ 225 (258)
T COG3638 146 STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGR 225 (258)
T ss_pred ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCc
Confidence 7999999999999999999999999999999999999999998743333456789999999999965 599999999999
Q ss_pred EEEecCHHHHH
Q 000511 807 VKWIGSSADLA 817 (1455)
Q Consensus 807 i~~~g~~~~l~ 817 (1455)
|+..|+.+|+.
T Consensus 226 ivfDg~~~el~ 236 (258)
T COG3638 226 IVFDGPASELT 236 (258)
T ss_pred EEEeCChhhhh
Confidence 99999998864
No 345
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-36 Score=331.72 Aligned_cols=181 Identities=24% Similarity=0.382 Sum_probs=160.3
Q ss_pred cEEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCC--CCCCceEEECCEeCCCCChHHHh
Q 000511 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDLR 1293 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~--~~~~G~I~IdG~di~~i~~~~lR 1293 (1455)
.|+++|++++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999642 246999999999999999999999999999999999986 489999999999986 5678
Q ss_pred cccEEEeCCCCCCCC-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1294 GRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1294 ~~i~~VpQdp~lf~g-TIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
++++++||+|.+|.+ |+++|+.... .++ +||||||||++||||++++|
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~---------~~~----------------------~LSgGe~qrv~la~al~~~p 127 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFSA---------LLR----------------------GLSVEQRKRLTIGVELAAKP 127 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHHH---------HHh----------------------cCCHHHhHHHHHHHHHhcCC
Confidence 899999999988875 9999986310 000 69999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-H-hhhCEEEEEeC-CeEEEeC
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDH-GHLVEQG 1433 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~t-i-~~~DrI~vl~~-G~ive~G 1433 (1455)
++|+|||||++||.++.+.+.+.|++.. +++|+|+|||+++. + ..||+|++|++ |++++.|
T Consensus 128 ~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 128 SILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred cEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 9999999999999999999999998764 47999999999984 4 56899999999 9999876
No 346
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-36 Score=323.43 Aligned_cols=207 Identities=28% Similarity=0.361 Sum_probs=172.0
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|.++.|..... ..++++||||++.+||..+|+|+||||||||.++|+|..+|++|+|.++|
T Consensus 3 ~l~v~nl~~~y~~~~~--~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~ 80 (252)
T COG1124 3 LLSVRNLSIVYGGGKF--AFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAF 80 (252)
T ss_pred eEEEeceEEEecCCcc--hhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhh
Confidence 4788999999976421 22579999999999999999999999999999999999999999999987
Q ss_pred --cEEEEcCCCCC-C--CcCHHHHhccCC-----CCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000511 669 --SIAYVPQVPWI-L--SGTIRDNILFGK-----NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1455)
Q Consensus 669 --~i~y~~Q~p~l-~--~~ti~~nI~~g~-----~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 738 (1455)
.|-+|+|+|.- + .-||++-|.-+. +-.+++..++++..+|.+... ......|||||||||
T Consensus 81 ~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l----------~R~P~eLSGGQ~QRi 150 (252)
T COG1124 81 YRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFL----------DRRPHELSGGQRQRI 150 (252)
T ss_pred ccceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHH----------hcCchhcChhHHHHH
Confidence 38899999973 2 348888875322 222345677888888866432 344568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHHH
Q 000511 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 817 (1455)
Q Consensus 739 alARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 817 (1455)
||||||..+|+++|||||||+||+.+...|++-+..-...++-|.|+|||++..+.+ ||||++|++|+++|.++.+++.
T Consensus 151 aIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~ 230 (252)
T COG1124 151 AIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELL 230 (252)
T ss_pred HHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhh
Confidence 999999999999999999999999999999986433223455699999999999987 9999999999999999988886
Q ss_pred hc
Q 000511 818 VS 819 (1455)
Q Consensus 818 ~~ 819 (1455)
..
T Consensus 231 ~~ 232 (252)
T COG1124 231 SH 232 (252)
T ss_pred cC
Confidence 43
No 347
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=4e-36 Score=343.28 Aligned_cols=217 Identities=22% Similarity=0.325 Sum_probs=177.8
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcC--CCCCCceEEECCEeCCCCChHHHhc-
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL--TPICGGQILVDGLNIINTPVRDLRG- 1294 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl--~~~~~G~I~IdG~di~~i~~~~lR~- 1294 (1455)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++...+.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4999999999963 3699999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ccEEEeCCCCCCCC-cHHHhcCcCCC----C---ChHHHHHHHHHhcHHHHHHhCCCc-hhhhcCCC-CCChhHHHHHHH
Q 000511 1295 RFAVVPQSPFLFEG-SLRDNLDPFHM----N---DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGI-SFSVGQRQLICL 1364 (1455)
Q Consensus 1295 ~i~~VpQdp~lf~g-TIreNLdp~~~----~---~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~-~LSgGQrQrl~L 1364 (1455)
.++++||+|.+|++ |+++|+..... . .+.+-.+.. ....+.++.+|+. ...+.... .||||||||++|
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~l 162 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFL--EIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNEI 162 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHH--HHHHHHHHHcCCchhhhccccccCCCHHHHHHHHH
Confidence 58999999999987 79999753210 0 010000111 1123334444665 34455444 599999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh--hCEEEEEeCCeEEEeCChhHH
Q 000511 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN--MDEILILDHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1365 ARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~--~DrI~vl~~G~ive~G~p~eL 1438 (1455)
|||++++|+|+||||||++||.++.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+|+++
T Consensus 163 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 239 (252)
T CHL00131 163 LQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAELA 239 (252)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChhhh
Confidence 999999999999999999999999999999998764 47999999999999875 799999999999999999844
No 348
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3.1e-36 Score=342.54 Aligned_cols=210 Identities=24% Similarity=0.383 Sum_probs=177.2
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEE
Q 000511 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1455)
Q Consensus 1220 ~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~V 1299 (1455)
+++||+++ .+|+|+||+|++||++||+|+||||||||+++|.|++++ +|+|.+||.++...+...+|+.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~-~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPG-SGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC-CeEEEECCEecCcCCHHHHhhheEEe
Confidence 56788774 289999999999999999999999999999999999864 99999999999988888888899999
Q ss_pred eCCCC-CCCCcHHHhcCcCCCC--ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc------
Q 000511 1300 PQSPF-LFEGSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK------ 1370 (1455)
Q Consensus 1300 pQdp~-lf~gTIreNLdp~~~~--~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr------ 1370 (1455)
||++. ++..|+++|+..+... +..+. .....+.++.+|++.........||+|||||++||||+++
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~~~ 149 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAV-----ASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPDIN 149 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHH-----HHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccccC
Confidence 99985 4567999999764321 11111 1123345555577666666777899999999999999997
Q ss_pred -CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1371 -SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1371 -~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+|++|||||||++||+++.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 150 p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 223 (248)
T PRK03695 150 PAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLTP 223 (248)
T ss_pred CCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhCc
Confidence 679999999999999999999999998764 47899999999997755 899999999999999999998753
No 349
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=2.7e-36 Score=321.33 Aligned_cols=164 Identities=33% Similarity=0.449 Sum_probs=150.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999643 46999999999999999999999999999999999999999999999873 68999
Q ss_pred EeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000511 1299 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1455)
Q Consensus 1299 VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLD 1378 (1455)
+||++.++++|++||+... ....||+|||||++||||++++|++++||
T Consensus 69 ~~q~~~~~~~tv~~nl~~~--------------------------------~~~~LS~G~~~rv~laral~~~p~~lllD 116 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP--------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLD 116 (166)
T ss_pred ECCCCccccccHHHHhhcc--------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 9999999999999998642 13479999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCCe
Q 000511 1379 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGH 1428 (1455)
Q Consensus 1379 EaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1428 (1455)
|||++||.++.+.+.+.|++. ++|+|++||+++....||+|++|++|-
T Consensus 117 EPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 117 EATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred CCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 999999999999999999876 689999999999888899999998763
No 350
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.4e-35 Score=382.67 Aligned_cols=226 Identities=24% Similarity=0.334 Sum_probs=156.2
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHh------cCC---CCCCce------------
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALF------RLT---PICGGQ------------ 1276 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~------rl~---~~~~G~------------ 1276 (1455)
.++++|++. ..|+|+|++|++||.+||+|.+|||||||+.-++ ++. .+..+.
T Consensus 614 ~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 686 (943)
T PRK00349 614 FLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKV 686 (943)
T ss_pred eEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCce
Confidence 478888752 2599999999999999999999999999998764 111 122233
Q ss_pred EEECCEeCCCCC----------hHHHhcccE---------EEeCCCCCCC-----------CcHHHhcCcCCC-------
Q 000511 1277 ILVDGLNIINTP----------VRDLRGRFA---------VVPQSPFLFE-----------GSLRDNLDPFHM------- 1319 (1455)
Q Consensus 1277 I~IdG~di~~i~----------~~~lR~~i~---------~VpQdp~lf~-----------gTIreNLdp~~~------- 1319 (1455)
|.||..++..-+ .+.+|.-.+ +-++.-.+.+ |+++.|+.+...
T Consensus 687 v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 766 (943)
T PRK00349 687 IDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766 (943)
T ss_pred EEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCcc
Confidence 344444333211 123333332 2222211211 345555433111
Q ss_pred -----C------------ChH-----HHHHHHHHh----c---HHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1320 -----N------------DDL-----KIWSVLEKC----H---VKEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1320 -----~------------~d~-----ei~~aL~~~----~---l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
+ +-. .+.++++-. + ..+.++.+||+. .++.....||||||||+.|||||+
T Consensus 767 C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~ 846 (943)
T PRK00349 767 CKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELS 846 (943)
T ss_pred ccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHh
Confidence 0 101 122222221 1 122344458875 467777899999999999999999
Q ss_pred cCC---CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhhCEEEEE------eCCeEEEeCChhHHh
Q 000511 1370 KSS---KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL------DHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1370 r~~---~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~vl------~~G~ive~G~p~eLl 1439 (1455)
++| +++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++.
T Consensus 847 ~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~ 926 (943)
T PRK00349 847 KRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPEEVA 926 (943)
T ss_pred cCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHHHHH
Confidence 999 9999999999999999999999998764 588999999999999999999999 799999999999999
Q ss_pred ccCCcHHHHHH
Q 000511 1440 QDECSVFSSFV 1450 (1455)
Q Consensus 1440 ~~~~s~f~~l~ 1450 (1455)
+++.+.=.+.+
T Consensus 927 ~~~~s~t~~~l 937 (943)
T PRK00349 927 KVEASYTGRYL 937 (943)
T ss_pred hCcccHHHHHH
Confidence 88765444433
No 351
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.9e-36 Score=339.29 Aligned_cols=206 Identities=25% Similarity=0.373 Sum_probs=168.7
Q ss_pred ceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC----CCceEEECCEeCCCCChHHHhcccEEEeCCCC-CC-C-
Q 000511 1235 ALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI----CGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-LF-E- 1307 (1455)
Q Consensus 1235 vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~----~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~-lf-~- 1307 (1455)
+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..+++++|+||+|. .| +
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 57999999999999999999999999999999999999 899999999998754 233468999999995 34 3
Q ss_pred CcHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCc---hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecc
Q 000511 1308 GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVGQRQLICLARALLKSSKVLCLDEC 1380 (1455)
Q Consensus 1308 gTIreNLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEa 1380 (1455)
-|+++|+... +... ++. +....+.++.+|++ ........+||+|||||++||||++++|+|||||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~-~~~-----~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLS-KQA-----RALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred cCHHHHHHHHHHHcCccH-HHH-----HHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 4898887421 1111 110 11123334444565 456667778999999999999999999999999999
Q ss_pred CcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHHHH
Q 000511 1381 TANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSS 1448 (1455)
Q Consensus 1381 TS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~ 1448 (1455)
|++||.++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++...+...|.+
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 999999999999999987643 7899999999999975 8999999999999999999998766555554
No 352
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=3.8e-33 Score=336.96 Aligned_cols=452 Identities=16% Similarity=0.179 Sum_probs=313.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCh--h---HHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 000511 333 TQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSD--G---EIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVAL 406 (1455)
Q Consensus 333 ~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~--g---~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~ 406 (1455)
....|...++..+.|..|..-+.+|-|.-....+-.... + ..-..+..|+........ ....+..+.+.++.-.
T Consensus 104 v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~ 183 (604)
T COG4178 104 VAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFT 183 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 346677788999999999999999999877543321111 1 122477778877766433 3334445555555555
Q ss_pred HHHHHHhHHHH---------HHHH--HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhhHHHHHhCc
Q 000511 407 YLLYTQVKFAF---------VSGL--AITILLIPVNKWIANLIAN----ATEKMMKQKDERIRRTGEILTHIRTLKMYGW 471 (1455)
Q Consensus 407 ~lL~~~lg~a~---------l~g~--~v~~~~~~~~~~~~~~~~~----~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~ 471 (1455)
.+||..-|.-+ +.|. .++++.++...+++-++++ ...+..+.-..--.....+..+...|-+|+.
T Consensus 184 ~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~G 263 (604)
T COG4178 184 GILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRG 263 (604)
T ss_pred HHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcC
Confidence 56664433110 1111 1122233333344434433 3222222222222345578889999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHH
Q 000511 472 EQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPT---LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSF 548 (1455)
Q Consensus 472 e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~---~~~~~~f~~~~~~~~~L~~~~~ft~l~l~~~l~~pl~~l 548 (1455)
|+...+++++.-..=++..++..........+...... +++.+ .++=.+..++++.|.+.++-..|+.+...+..+
T Consensus 264 E~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~l-i~ap~~f~g~i~~G~lmqa~~aF~~v~sslswf 342 (604)
T COG4178 264 EKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPIL-IAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWF 342 (604)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHH-hccHhhhcCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 99887777665443333333222222111111111111 11111 111124577899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCC---CchhhhhhcCCCCcccCCCccC-CCCCceEEEEcceEeecCCCcccccccce
Q 000511 549 PWVINGLIDAFISIRRLTRFLGCSE---YKHELEQAANSPSYISNGLSNF-NSKDMAVIMQDATCSWYCNNEEEQNVVLN 624 (1455)
Q Consensus 549 ~~~i~~~~~a~~s~~RI~~fL~~~e---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~sf~w~~~~~~~~~~~l~ 624 (1455)
...++.+.+=+++..|+.+|-..-+ .++.... . . ...... ...+..|.++|++..-+.. .+.++
T Consensus 343 i~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~-----~-~-~~~~~~~~~~~~~i~~~nl~l~~p~~-----~~ll~ 410 (604)
T COG4178 343 IDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPA-----R-T-GRRIDFDDNADHGITLENLSLRTPDG-----QTLLS 410 (604)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccC-----c-c-cccccccccccceeEEeeeeEECCCC-----Ceeec
Confidence 9999999999999999999985422 1110000 0 0 000000 0115789999999987643 24599
Q ss_pred eceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEc-C-cEEEEcCCCCCCCcCHHHHhccCC---CCCHHHH
Q 000511 625 QVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHAS-G-SIAYVPQVPWILSGTIRDNILFGK---NYDPQSY 699 (1455)
Q Consensus 625 ~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~-~-~i~y~~Q~p~l~~~ti~~nI~~g~---~~~~~~~ 699 (1455)
+.||++++|+.+.|.|+||||||||+++|.|..|--+|+|... + .+-|+||.|.++.||.||-|++.. +++++.+
T Consensus 411 ~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l 490 (604)
T COG4178 411 ELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAEL 490 (604)
T ss_pred cceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHH
Confidence 9999999999999999999999999999999999999999887 3 489999999999999999999874 2788999
Q ss_pred HHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC
Q 000511 700 SETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML 779 (1455)
Q Consensus 700 ~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~ 779 (1455)
.+++..|+|.+-++.+.+-++ =...||||||||||+||.++++|++++|||.|||||++++..+++. +.+ .+.
T Consensus 491 ~~vL~~vgL~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~-l~~-~lp 563 (604)
T COG4178 491 VAVLHKVGLGDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQL-LKE-ELP 563 (604)
T ss_pred HHHHHHcCcHHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHH-HHh-hCC
Confidence 999999999988777654332 3458999999999999999999999999999999999999998887 444 567
Q ss_pred CceEEEEccCccccccCCEEEEEeC
Q 000511 780 QKTRILCTHNVQAISAADMVVVMDK 804 (1455)
Q Consensus 780 ~~t~ilvth~~~~l~~ad~i~~l~~ 804 (1455)
+.|+|-|.|+.......++.+.+.+
T Consensus 564 ~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 564 DATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred CCEEEEeccchhhHHHHhhheeecc
Confidence 8999999999998887777666643
No 353
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.4e-36 Score=336.43 Aligned_cols=197 Identities=27% Similarity=0.376 Sum_probs=163.5
Q ss_pred EEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh----HHHhccc
Q 000511 1221 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV----RDLRGRF 1296 (1455)
Q Consensus 1221 f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~----~~lR~~i 1296 (1455)
++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4789999963 469999999999999999999999999999999999999999999999999775542 2467889
Q ss_pred EEEeCCCCCCC-CcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1297 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1297 ~~VpQdp~lf~-gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
++++|+|.+|+ .|++||+.+... ...++..+ ...+.++.+|++...+....+||+|||||++|||||+++|
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~lS~G~~qr~~laral~~~p 153 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKRE-----KKKEALEKVGLNLKLKQKIYELSGGEQQRVALARAILKDP 153 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCchhhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 99999999997 599999975211 11111111 1223344446655556666789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhhCEEEEE
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL 1424 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~vl 1424 (1455)
++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+..||+|++|
T Consensus 154 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 154 PLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred CEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999998764 478999999999988889999885
No 354
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.4e-37 Score=303.47 Aligned_cols=197 Identities=25% Similarity=0.420 Sum_probs=170.9
Q ss_pred EecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCC
Q 000511 1227 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1306 (1455)
Q Consensus 1227 ~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf 1306 (1455)
.|.....++|+|+||++++||.++|.||||||||||++.+.-+.+|++|.++..|.|++..+++.+|++++|+-|.|.||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 46556678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHhcC-cCC---CCChH-HHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccC
Q 000511 1307 EGSLRDNLD-PFH---MNDDL-KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1381 (1455)
Q Consensus 1307 ~gTIreNLd-p~~---~~~d~-ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaT 1381 (1455)
.+||.||+- |+. ...|. .-.+-|+++++. ++.+..+..+||||||||++|+|-|---|+||+|||+|
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~--------~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~T 161 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRAAALDLLARFALP--------DSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEIT 161 (223)
T ss_pred ccchhhccccchHHhccCCChHHHHHHHHHcCCc--------hhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCch
Confidence 999999985 332 22232 222333333332 23455666789999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhh-HhhhCEEEEEeCCeEEE
Q 000511 1382 ANVDAQTASILQNAISSEC--KGMTVITIAHRIST-VLNMDEILILDHGHLVE 1431 (1455)
Q Consensus 1382 S~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~t-i~~~DrI~vl~~G~ive 1431 (1455)
|+||..+.+.|.+.|.+++ ++..++.|||+-+. ++.+||++-+..|++-|
T Consensus 162 sALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~ 214 (223)
T COG4619 162 SALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGE 214 (223)
T ss_pred hhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcccc
Confidence 9999999999999999887 48899999999997 88999999999998744
No 355
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=5.4e-36 Score=341.50 Aligned_cols=215 Identities=18% Similarity=0.289 Sum_probs=171.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCC--CCCCceEEECCEeCCCCChHHHh-cc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDLR-GR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~--~~~~G~I~IdG~di~~i~~~~lR-~~ 1295 (1455)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999964 36999999999999999999999999999999999995 69999999999999888776654 57
Q ss_pred cEEEeCCCCCCCC-cHHHhcCcC-C---CCChHHHHHHHHHhc----HHHHHHhCCCch-hhhcCCC-CCChhHHHHHHH
Q 000511 1296 FAVVPQSPFLFEG-SLRDNLDPF-H---MNDDLKIWSVLEKCH----VKEEVEAVGLET-FVKESGI-SFSVGQRQLICL 1364 (1455)
Q Consensus 1296 i~~VpQdp~lf~g-TIreNLdp~-~---~~~d~ei~~aL~~~~----l~~~i~~lgLdt-~v~e~G~-~LSgGQrQrl~L 1364 (1455)
++++||+|.+++. |..+|+... . .....+ .++..+ +.+.++.++++. ....... .||||||||++|
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~l 156 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQE---PLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDI 156 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccc---cchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHH
Confidence 9999999987765 544443211 0 000000 111111 223334446632 2222232 699999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhHhh--hCEEEEEeCCeEEEeCChhHH
Q 000511 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVLN--MDEILILDHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1365 ARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~-~~TvI~IaHrl~ti~~--~DrI~vl~~G~ive~G~p~eL 1438 (1455)
|||++++|+||||||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.. +|+|++|++|++++.|++++.
T Consensus 157 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 233 (248)
T PRK09580 157 LQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLV 233 (248)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999987643 7899999999999987 799999999999999999855
No 356
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=6.4e-36 Score=356.77 Aligned_cols=228 Identities=27% Similarity=0.452 Sum_probs=184.2
Q ss_pred cEEEEEEEEEecCCCC--cceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCC----CceEEECCEeCCCCChHH
Q 000511 1218 LIEFQNVTMRYKPSLP--AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC----GGQILVDGLNIINTPVRD 1291 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~--~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~----~G~I~IdG~di~~i~~~~ 1291 (1455)
-++++|++..|..... .+++||||+|.+||.+||||+|||||||+.++|+|+.++. +|+|.+||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975433 5999999999999999999999999999999999999987 899999999999998866
Q ss_pred Hh----cccEEEeCCCC-CCCC--cHHHhcC----cCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhc--CCCCCChhH
Q 000511 1292 LR----GRFAVVPQSPF-LFEG--SLRDNLD----PFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKE--SGISFSVGQ 1358 (1455)
Q Consensus 1292 lR----~~i~~VpQdp~-lf~g--TIreNLd----p~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e--~G~~LSgGQ 1358 (1455)
.| ++|++|||||+ .++- ||.+-+. .....+.+|. +....+.++..|+...... -...|||||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea-----~~~a~elL~~Vgl~~~~~~~~yPheLSGG~ 159 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEA-----RKRAVELLEQVGLPDPERRDRYPHQLSGGM 159 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHH-----HHHHHHHHHHcCCCChhhhccCCcccCchH
Confidence 54 57999999996 4433 5544432 1111111110 0111222333355544433 567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCCh
Q 000511 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1359 rQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p 1435 (1455)
|||+.||+||..+|++||+||||.+||+.|.+.|.+.|++.. .+.++|+|||++..+.. ||||+||.+|+++|.|++
T Consensus 160 rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~ 239 (539)
T COG1123 160 RQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPT 239 (539)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCH
Confidence 999999999999999999999999999999999999998765 58999999999999976 899999999999999999
Q ss_pred hHHhccCCcHHHHHH
Q 000511 1436 QTLLQDECSVFSSFV 1450 (1455)
Q Consensus 1436 ~eLl~~~~s~f~~l~ 1450 (1455)
+++++++...|.+.+
T Consensus 240 ~~i~~~p~hpYT~~L 254 (539)
T COG1123 240 EEILSNPQHPYTRGL 254 (539)
T ss_pred HHHHhccCCcccHHH
Confidence 999998876665443
No 357
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=7.5e-36 Score=333.98 Aligned_cols=205 Identities=34% Similarity=0.467 Sum_probs=180.5
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|+++.|... . .++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~-~---~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~ 77 (220)
T cd03245 2 RIEFRNVSFSYPNQ-E---IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLR 77 (220)
T ss_pred eEEEEEEEEEcCCC-C---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHH
Confidence 36889999998532 1 2359999999999999999999999999999999999999999998876
Q ss_pred -cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHcc
Q 000511 669 -SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 746 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 746 (1455)
.++|++|+|+++..|++||+.++.. .++++..+.++.+++...++..|.|.+|.+.....+||||||||++||||+..
T Consensus 78 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~ 157 (220)
T cd03245 78 RNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLN 157 (220)
T ss_pred hhEEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhc
Confidence 4899999999998999999988643 34556778888899988889999999999998999999999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEec
Q 000511 747 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 747 ~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g 811 (1455)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 158 ~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 158 DPPILLLDEPTSAMDMNSEERLKER-LRQ-LLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999988876 433 33348999999999988789999999999997653
No 358
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.4e-36 Score=358.53 Aligned_cols=188 Identities=27% Similarity=0.363 Sum_probs=158.9
Q ss_pred ccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------------cEEEEcCCCCCCCc-
Q 000511 621 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILSG- 682 (1455)
Q Consensus 621 ~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------------~i~y~~Q~p~l~~~- 682 (1455)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++||+|++++|+.
T Consensus 7 ~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~ 86 (363)
T TIGR01186 7 KGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHM 86 (363)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCC
Confidence 359999999999999999999999999999999999999999999876 49999999999975
Q ss_pred CHHHHhccCCCC---CH-HHH---HHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcC
Q 000511 683 TIRDNILFGKNY---DP-QSY---SETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 755 (1455)
Q Consensus 683 ti~~nI~~g~~~---~~-~~~---~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe 755 (1455)
||+|||.|+.++ +. ++. .++++..+|+.. .+....+|||||||||+|||||+.+|+|+||||
T Consensus 87 TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~-----------~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 87 TILQNTSLGPELLGWPEQERKEKALELLKLVGLEEY-----------EHRYPDELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchh-----------hhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 999999986432 22 233 344444444332 455667999999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000511 756 VLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 819 (1455)
Q Consensus 756 p~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1455)
|||+||+.+.+++.+.+.......++|+|+|||+++.+. .||+|++|++|++++.|+++++..+
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999988744221234789999999999865 5999999999999999999998654
No 359
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=356.08 Aligned_cols=202 Identities=28% Similarity=0.422 Sum_probs=169.7
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------c
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 669 (1455)
.++++|+++.|+.+ ..+|+|+||++++|++++|+|||||||||||++|+|+.+|++|+|.++| .
T Consensus 3 ~l~i~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ 77 (356)
T PRK11650 3 GLKLQAVRKSYDGK-----TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRD 77 (356)
T ss_pred EEEEEeEEEEeCCC-----CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 37899999999421 2359999999999999999999999999999999999999999999986 4
Q ss_pred EEEEcCCCCCCC-cCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 670 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 670 i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
||||+|++.+|. .||+|||.|+.. .+. ++..++++..+|+.... ....+|||||||||+||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~QRvalA 146 (356)
T PRK11650 78 IAMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLD-----------RKPRELSGGQRQRVAMG 146 (356)
T ss_pred EEEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhh-----------CChhhCCHHHHHHHHHH
Confidence 999999999985 599999998743 222 34556667777754433 34458999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 819 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1455)
|||+.+|+++|||||||+||+.+.+.+.+.+ .... ..+.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 147 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 147 RAIVREPAVFLFDEPLSNLDAKLRVQMRLEI-QRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999999999999999999888763 3212 23789999999998765 5999999999999999999998653
No 360
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2.9e-36 Score=338.93 Aligned_cols=194 Identities=27% Similarity=0.364 Sum_probs=163.3
Q ss_pred eeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCCCC-CcHHHhc
Q 000511 1236 LHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFE-GSLRDNL 1314 (1455)
Q Consensus 1236 L~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~-gTIreNL 1314 (1455)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|+ .|++||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 579999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CcC-----CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHH
Q 000511 1315 DPF-----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTA 1389 (1455)
Q Consensus 1315 dp~-----~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te 1389 (1455)
... ...++++..+ .+.+.++.+|++.........||||||||++|||||+++|++|||||||++||+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRA-----IVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHHhcccCCCHHHHHH-----HHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 642 1122222111 123344445666656666678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1390 SILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1390 ~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++.+++
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999998764 37899999999999875 8999999999999999887663
No 361
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=5e-36 Score=338.40 Aligned_cols=195 Identities=29% Similarity=0.393 Sum_probs=160.6
Q ss_pred CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEe-CCCCCC-CCcH
Q 000511 1233 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP-QSPFLF-EGSL 1310 (1455)
Q Consensus 1233 ~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~Vp-Qdp~lf-~gTI 1310 (1455)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|+| |++.+| ..|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 4699999999999999999999999999999999999999999999999987653 346788999997 667676 4699
Q ss_pred HHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHH
Q 000511 1311 RDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQ 1387 (1455)
Q Consensus 1311 reNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~ 1387 (1455)
+||+.... ..++++..+. ..+.++.+|++.........||+|||||++||||++++|++|||||||++||++
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~ 187 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKR-----LDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVV 187 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHH
Confidence 99986422 1222222221 122333346655455555679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1388 TASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1388 te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 188 ~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 188 AQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999998764 37899999999998866 8999999999998765
No 362
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.9e-36 Score=353.13 Aligned_cols=203 Identities=28% Similarity=0.355 Sum_probs=168.1
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|+++.|+.... ..++|+|+||++++||+++|+||||||||||+++|.|+.+|++|+|.++|
T Consensus 2 I~~~~lsk~y~~~~~--~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~ 79 (343)
T TIGR02314 2 IKLSNITKVFHQGTK--TIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTK 79 (343)
T ss_pred EEEEEEEEEECCCCc--ceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHH
Confidence 678999999963211 12469999999999999999999999999999999999999999998875
Q ss_pred ---cEEEEcCCCCCCC-cCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
.|+|++|++.++. .|++|||.++.. .+. ++..++++..+|.+. .......||||||||
T Consensus 80 ~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~-----------~~~~~~~LSgGqkQR 148 (343)
T TIGR02314 80 ARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDK-----------HDSYPSNLSGGQKQR 148 (343)
T ss_pred HhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 4899999999985 699999987532 222 233455555555432 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 815 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 815 (1455)
|+|||||..+|+++|||||||+||+.+.+.+++. +..-. ..+.|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 V~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~l-L~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~ 227 (343)
T TIGR02314 149 VAIARALASNPKVLLCDEATSALDPATTQSILEL-LKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSE 227 (343)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999998876 33211 237899999999999865 99999999999999999999
Q ss_pred HHh
Q 000511 816 LAV 818 (1455)
Q Consensus 816 l~~ 818 (1455)
+..
T Consensus 228 v~~ 230 (343)
T TIGR02314 228 IFS 230 (343)
T ss_pred HHc
Confidence 864
No 363
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-36 Score=349.91 Aligned_cols=209 Identities=27% Similarity=0.427 Sum_probs=171.1
Q ss_pred CCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC---------
Q 000511 598 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 668 (1455)
Q Consensus 598 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------- 668 (1455)
.+..++++|++|.|+.... ...++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 18 ~~~~l~~~nl~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~ 96 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQE-NELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNN 96 (320)
T ss_pred CCceEEEEeEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccc
Confidence 3457899999999964211 112469999999999999999999999999999999999999999998763
Q ss_pred --------------------cEEEEcCCC--CCCCcCHHHHhccCCC---CCHH----HHHHHHHHhcchHHHhhccCCC
Q 000511 669 --------------------SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGD 719 (1455)
Q Consensus 669 --------------------~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~l~~gd 719 (1455)
.++||+|+| ++++.||+|||.|+.. .+++ +..+.++.+++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~--------- 167 (320)
T PRK13631 97 HELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD--------- 167 (320)
T ss_pred ccccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh---------
Confidence 279999998 7899999999998742 2222 2333444444421
Q ss_pred cccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCE
Q 000511 720 MAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADM 798 (1455)
Q Consensus 720 ~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~ 798 (1455)
...++.+.+||||||||++|||||..+|+++||||||++||+.+.+.+++. +.....+++|+|++||+++.+. .||+
T Consensus 168 -~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~-L~~l~~~g~TiiivtHd~~~~~~~adr 245 (320)
T PRK13631 168 -SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQL-ILDAKANNKTVFVITHTMEHVLEVADE 245 (320)
T ss_pred -hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCE
Confidence 224667789999999999999999999999999999999999999988876 3331235789999999999875 5999
Q ss_pred EEEEeCCeEEEecCHHHHHh
Q 000511 799 VVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 799 i~~l~~G~i~~~g~~~~l~~ 818 (1455)
|++|++|++++.|+++++..
T Consensus 246 i~vl~~G~i~~~g~~~~~~~ 265 (320)
T PRK13631 246 VIVMDKGKILKTGTPYEIFT 265 (320)
T ss_pred EEEEECCEEEEeCCHHHHhc
Confidence 99999999999999998754
No 364
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-36 Score=321.63 Aligned_cols=222 Identities=26% Similarity=0.433 Sum_probs=190.1
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH-hccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l-R~~i 1296 (1455)
-++.+|++.+|.. -.+++||||++++||.+|++|||||||||+++++.|+|+|++|+|.++|.||..++++.. |..|
T Consensus 4 lL~v~~l~k~FGG--l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi 81 (250)
T COG0411 4 LLEVRGLSKRFGG--LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGI 81 (250)
T ss_pred eeeeccceeecCC--EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccc
Confidence 3678999999964 359999999999999999999999999999999999999999999999999999998875 4458
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCC------------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHM------------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~------------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1455)
+--.|.+-+|++ |+-||+..... ....+-.++.+++ .+.++.+||+...++...+||+||++|+-
T Consensus 82 ~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A--~~~Le~vgL~~~a~~~A~~LsyG~qR~LE 159 (250)
T COG0411 82 ARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERA--RELLEFVGLGELADRPAGNLSYGQQRRLE 159 (250)
T ss_pred eeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHH--HHHHHHcCCchhhcchhhcCChhHhHHHH
Confidence 888999999987 99999854311 0000112222222 34455558888888888899999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1364 LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
|||||..+|++|+||||.++|.++-...+.+.|++..+ +.|+++|-||++.+++ ||||+||+.|+++..|+|+|..+
T Consensus 160 IArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 160 IARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred HHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHhc
Confidence 99999999999999999999999999999999988764 4899999999999987 89999999999999999999998
Q ss_pred cCC
Q 000511 1441 DEC 1443 (1455)
Q Consensus 1441 ~~~ 1443 (1455)
++.
T Consensus 240 dp~ 242 (250)
T COG0411 240 NPR 242 (250)
T ss_pred CHH
Confidence 763
No 365
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=371.96 Aligned_cols=216 Identities=25% Similarity=0.397 Sum_probs=182.9
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC--CCceEEECCEeCCCCChHH-Hhc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRD-LRG 1294 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~--~~G~I~IdG~di~~i~~~~-lR~ 1294 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+... .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 5899999999963 4699999999999999999999999999999999999996 8999999999998777654 467
Q ss_pred ccEEEeCCCCCCCC-cHHHhcCcCCC------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000511 1295 RFAVVPQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1295 ~i~~VpQdp~lf~g-TIreNLdp~~~------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1455)
+++||||+|.+|+. |++||+.+... .+.++..+ .+.+.++.+|++........+||||||||++||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 157 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKA 157 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHH
Confidence 89999999988875 99999975421 11111111 13344555577655555666899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1368 lLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
|+.+|+|||||||||+||+++...+.+.|++.. ++.|||+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 232 (506)
T PRK13549 158 LNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTE 232 (506)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCH
Confidence 999999999999999999999999999998763 47899999999999876 89999999999999999988743
No 366
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.5e-35 Score=369.05 Aligned_cols=215 Identities=24% Similarity=0.389 Sum_probs=183.7
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHh-ccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLR-GRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR-~~i 1296 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+....+ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999964 4699999999999999999999999999999999999999999999999999888776655 469
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~IL 1375 (1455)
+|+||++.+|++ |++||+.......+ +.. ..+.+.++.+|++.........||||||||++|||||+++|+||
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~-~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~ll 162 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQ-ASM-----QKMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDSRIL 162 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccch-HHH-----HHHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999998876 99999976432111 111 11233444456665555556689999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1376 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1376 lLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 163 ILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 9999999999999999999998763 47899999999999875 89999999999999999998865
No 367
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.3e-35 Score=331.49 Aligned_cols=199 Identities=39% Similarity=0.692 Sum_probs=175.3
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--------------
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 668 (1455)
.+.|+.|.|+.. .++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~~-----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (218)
T cd03290 2 QVTNGYFSWGSG-----LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSR 76 (218)
T ss_pred eeeeeEEecCCC-----CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchh
Confidence 456888998643 2359999999999999999999999999999999999999999998854
Q ss_pred ---cEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHc
Q 000511 669 ---SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 745 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly 745 (1455)
.++|++|+|.+++.|++||+.++.+++.++.+++++++++...++.+|.|+++.++....+||||||||++||||++
T Consensus 77 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~ 156 (218)
T cd03290 77 NRYSVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALY 156 (218)
T ss_pred hcceEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHh
Confidence 38999999999999999999987766666778899999998888889999999999999999999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHH-hhcCcccCCceEEEEccCccccccCCEEEEEeCCe
Q 000511 746 HGSDIYMLDDVLSAVDAQVARWILSN-AIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1455)
Q Consensus 746 ~~~~illlDep~s~lD~~~~~~i~~~-~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1455)
.+|+++||||||++||+.+.+.+.+. ++......+.|+|++||+.+.++.||++++|++|.
T Consensus 157 ~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 157 QNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred hCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988877762 22221234689999999999998899999999884
No 368
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-35 Score=323.41 Aligned_cols=220 Identities=26% Similarity=0.372 Sum_probs=185.7
Q ss_pred cEEEEEEEEEecCCC----------------------CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCc
Q 000511 1218 LIEFQNVTMRYKPSL----------------------PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1275 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~----------------------~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G 1275 (1455)
.|+++||+.-+..+. ..-++|+||+|+.||...|.|=||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 588888888775431 1248899999999999999999999999999999999999999
Q ss_pred eEEECCEeCCCCChHHHh----cccEEEeCCCCCCCC-cHHHhcCcCCCC---Ch----HHHHHHHHHhcHHHHHHhCCC
Q 000511 1276 QILVDGLNIINTPVRDLR----GRFAVVPQSPFLFEG-SLRDNLDPFHMN---DD----LKIWSVLEKCHVKEEVEAVGL 1343 (1455)
Q Consensus 1276 ~I~IdG~di~~i~~~~lR----~~i~~VpQdp~lf~g-TIreNLdp~~~~---~d----~ei~~aL~~~~l~~~i~~lgL 1343 (1455)
+|++||.|+..++..+|| +++++|.|.--||+- ||-||..++-+. +. +...++|+.+||
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL--------- 154 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGL--------- 154 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCc---------
Confidence 999999999999988775 579999999999986 999999876432 22 223344555554
Q ss_pred chhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCE
Q 000511 1344 ETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDE 1420 (1455)
Q Consensus 1344 dt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~Dr 1420 (1455)
+..-......||||+|||+.|||||..+|+||++|||.|+||+--...+|+-+.+.- -++||++|||+|+.... -||
T Consensus 155 ~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~r 234 (386)
T COG4175 155 EGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDR 234 (386)
T ss_pred hhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccce
Confidence 444444566799999999999999999999999999999999999999999886542 37899999999997654 799
Q ss_pred EEEEeCCeEEEeCChhHHhccCCcHH
Q 000511 1421 ILILDHGHLVEQGNPQTLLQDECSVF 1446 (1455)
Q Consensus 1421 I~vl~~G~ive~G~p~eLl~~~~s~f 1446 (1455)
|..|++|+|+..|+|+|++.+|..-|
T Consensus 235 IaimkdG~ivQ~Gtp~eIl~~PAndY 260 (386)
T COG4175 235 IAIMKDGEIVQVGTPEEILLNPANDY 260 (386)
T ss_pred EEEecCCeEEEeCCHHHHHcCccHHH
Confidence 99999999999999999999886433
No 369
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=350.87 Aligned_cols=201 Identities=27% Similarity=0.412 Sum_probs=168.3
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------c
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 669 (1455)
.++++|+++.|.. . .+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| +
T Consensus 6 ~l~~~~l~~~~~~---~---~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ 79 (351)
T PRK11432 6 FVVLKNITKRFGS---N---TVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRD 79 (351)
T ss_pred EEEEEeEEEEECC---e---EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 5889999999953 2 359999999999999999999999999999999999999999999876 5
Q ss_pred EEEEcCCCCCCCc-CHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 670 IAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 670 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
||||+|++.+|.. ||+|||.|+.. .++ ++.+++++..++... .......|||||||||+||
T Consensus 80 ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~-----------~~r~~~~LSgGq~QRVaLA 148 (351)
T PRK11432 80 ICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGF-----------EDRYVDQISGGQQQRVALA 148 (351)
T ss_pred EEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHH
Confidence 9999999999865 99999998743 222 234445555555322 2345568999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 819 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1455)
|||+.+|+++|||||||+||+.+.+.+.+. +.... ..+.|+|+|||+.+.+. .||+|++|++|++.+.|+++++...
T Consensus 149 RaL~~~P~lLLLDEP~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 149 RALILKPKVLLFDEPLSNLDANLRRSMREK-IRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999988776 33311 23789999999999875 5999999999999999999998643
No 370
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=2.6e-35 Score=312.85 Aligned_cols=159 Identities=33% Similarity=0.518 Sum_probs=148.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh-HHHhcccE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFA 1297 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~-~~lR~~i~ 1297 (1455)
|+++|++++|+. .++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. +..|++++
T Consensus 1 l~~~~l~~~~~~--~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGG--VKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 578999999964 369999999999999999999999999999999999999999999999999988875 45678899
Q ss_pred EEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000511 1298 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1377 (1455)
Q Consensus 1298 ~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlL 1377 (1455)
++|| ||+|||||++||||++++|++++|
T Consensus 79 ~~~q----------------------------------------------------LS~G~~qrl~laral~~~p~illl 106 (163)
T cd03216 79 MVYQ----------------------------------------------------LSVGERQMVEIARALARNARLLIL 106 (163)
T ss_pred EEEe----------------------------------------------------cCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999 999999999999999999999999
Q ss_pred eccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEE
Q 000511 1378 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVE 1431 (1455)
Q Consensus 1378 DEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1431 (1455)
||||++||.++.+.+.+.|++.. ++.|+|++||+++.+.. ||++++|++|++++
T Consensus 107 DEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 107 DEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred ECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999998764 47899999999998865 89999999999976
No 371
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=370.66 Aligned_cols=216 Identities=19% Similarity=0.304 Sum_probs=182.7
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH-hccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l-R~~i 1296 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999963 369999999999999999999999999999999999999999999999999988876554 4679
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCC----C------ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHM----N------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~----~------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1455)
+||||++.+|+. |++||+..... . +.++.. ..+.+.++.+|++...+....+||||||||++||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia 157 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMR-----VRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIA 157 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHH-----HHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHH
Confidence 999999988876 99999965321 0 111111 1123444555776555555668999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1366 RAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
|||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 158 KTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999998763 47899999999999876 89999999999999999988754
No 372
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.8e-35 Score=326.62 Aligned_cols=194 Identities=25% Similarity=0.336 Sum_probs=164.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 689999999964 46999999999999999999999999999999999999999999999999997654 456788999
Q ss_pred EeCCCCCCC-CcHHHhcCcCCC----CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1299 VPQSPFLFE-GSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1299 VpQdp~lf~-gTIreNLdp~~~----~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
+||++.+++ .|++||+..... .+++++.++++..+ ++.........||+|||||++||||++++|+
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~g---------l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 149 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVG---------LAGFEDVPVRQLSAGQQRRVALARLWLTRAP 149 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcC---------CHHHhhCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999998886 599999965321 12334444555554 4433444556899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhh-CEEEEE
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNM-DEILIL 1424 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~~-DrI~vl 1424 (1455)
+++|||||++||+++.+.+.+.|++.. +++|+|++||+++.+..| +|++++
T Consensus 150 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 150 LWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 999999999999999999999998763 478999999999999766 788776
No 373
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=369.10 Aligned_cols=216 Identities=19% Similarity=0.312 Sum_probs=181.3
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHH-Hhccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~-lR~~i 1296 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999963 46999999999999999999999999999999999999999999999999997665544 46789
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCC-------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~-------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
+|+||++.+|+. |++||+.+... .+..+..+ .+.+.++.+|++........+||||||||++|||||
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 156 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVL 156 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHH
Confidence 999999988875 99999975321 11111111 123445555665555555568999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
+.+|++|||||||++||+.+.+.+.+.|++.. ++.|||+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (501)
T PRK10762 157 SFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE 230 (501)
T ss_pred hcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH
Confidence 99999999999999999999999999998753 47899999999999875 89999999999999999887643
No 374
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=335.08 Aligned_cols=198 Identities=28% Similarity=0.367 Sum_probs=163.5
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--------------
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 668 (1455)
+++|+++.|.. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 75 (235)
T cd03261 2 ELRGLTKSFGG---R---TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRL 75 (235)
T ss_pred eEEEEEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHH
Confidence 57889998852 2 359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCCc-CHHHHhccCCC----CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 --SIAYVPQVPWILSG-TIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 --~i~y~~Q~p~l~~~-ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
.++|++|+|.+++. |++||+.++.. .++ ++..++++.+++.... .....+||||||||
T Consensus 76 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qr 144 (235)
T cd03261 76 RRRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-----------DLYPAELSGGMKKR 144 (235)
T ss_pred hcceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHH
Confidence 38999999998876 99999987521 222 2344455555554322 33456899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 815 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 815 (1455)
|+||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 v~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 223 (235)
T cd03261 145 VALARALALDPELLLYDEPTAGLDPIASGVIDDL-IRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEE 223 (235)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHH
Confidence 9999999999999999999999999999988876 333122 37899999999998765 99999999999999999888
Q ss_pred HHh
Q 000511 816 LAV 818 (1455)
Q Consensus 816 l~~ 818 (1455)
+..
T Consensus 224 ~~~ 226 (235)
T cd03261 224 LRA 226 (235)
T ss_pred HcC
Confidence 753
No 375
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=4.2e-35 Score=322.74 Aligned_cols=194 Identities=23% Similarity=0.336 Sum_probs=164.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999964 36999999999999999999999999999999999999999999999999987654 567889999
Q ss_pred EeCCCCCC-CCcHHHhcCcCCC-CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000511 1299 VPQSPFLF-EGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1376 (1455)
Q Consensus 1299 VpQdp~lf-~gTIreNLdp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILl 1376 (1455)
+||++.++ ..|++||+..... ..++++.++++..++.+. ......+||||||||++||||++++|+++|
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~---------~~~~~~~LS~G~~qrl~laral~~~p~lll 148 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGF---------EDRPVAQLSAGQQRRVALARLLLSGRPLWI 148 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhh---------hcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999876 5799999975432 244556666666655432 233445799999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hhCEEEEE
Q 000511 1377 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILIL 1424 (1455)
Q Consensus 1377 LDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl 1424 (1455)
|||||++||+.+.+.+.+.|++.. +++|+|+|||+...+. .||+++++
T Consensus 149 lDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 149 LDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 999999999999999999998754 4799999999877665 47999877
No 376
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.7e-35 Score=350.11 Aligned_cols=202 Identities=26% Similarity=0.381 Sum_probs=169.8
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|+++.|.. . .+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|
T Consensus 13 ~~L~l~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r 86 (375)
T PRK09452 13 PLVELRGISKSFDG---K---EVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENR 86 (375)
T ss_pred ceEEEEEEEEEECC---e---EEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHC
Confidence 45899999999853 2 359999999999999999999999999999999999999999999886
Q ss_pred cEEEEcCCCCCCCc-CHHHHhccCCCC---CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHH
Q 000511 669 SIAYVPQVPWILSG-TIRDNILFGKNY---DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 740 (1455)
Q Consensus 669 ~i~y~~Q~p~l~~~-ti~~nI~~g~~~---~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRval 740 (1455)
.++||+|++.+|.. ||+|||.|+... ++ ++.+++++..++....+. ...+|||||||||+|
T Consensus 87 ~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~p~~LSgGq~QRVaL 155 (375)
T PRK09452 87 HVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQR-----------KPHQLSGGQQQRVAI 155 (375)
T ss_pred CEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHHHH
Confidence 49999999999865 999999987432 22 244556666666544433 345899999999999
Q ss_pred HHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHHHh
Q 000511 741 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 741 ARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
||||+.+|+++|||||||+||+...+.+.+. +.... ..+.|+|+|||+.+.+. .||+|++|++|+|.+.|+++++..
T Consensus 156 ARaL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~ 234 (375)
T PRK09452 156 ARAVVNKPKVLLLDESLSALDYKLRKQMQNE-LKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYE 234 (375)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999998887776 33211 23789999999999865 599999999999999999999865
Q ss_pred c
Q 000511 819 S 819 (1455)
Q Consensus 819 ~ 819 (1455)
.
T Consensus 235 ~ 235 (375)
T PRK09452 235 E 235 (375)
T ss_pred C
Confidence 3
No 377
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=341.55 Aligned_cols=205 Identities=25% Similarity=0.381 Sum_probs=170.0
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|++|+|+.... ...++|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 i~~~~v~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 2 IKFEKVNYTYQPNSP-FASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred EEEEEEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 678999999964321 112469999999999999999999999999999999999999999998875
Q ss_pred ----cEEEEcCCC--CCCCcCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000511 669 ----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1455)
Q Consensus 669 ----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQk 735 (1455)
.++||+|+| .+++.|+.|||.|+.. .++ +++.++++..++..++ ......+||||||
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSgGqk 150 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSGGQM 150 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCHHHH
Confidence 379999998 7888999999998742 222 3455666666664332 2345679999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHH
Q 000511 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 814 (1455)
Q Consensus 736 qRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 814 (1455)
||++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+. .||+|++|++|+++++|+++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~ 229 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQL-FESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPS 229 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999888775 3321234789999999999885 59999999999999999999
Q ss_pred HHHh
Q 000511 815 DLAV 818 (1455)
Q Consensus 815 ~l~~ 818 (1455)
++..
T Consensus 230 ~~~~ 233 (288)
T PRK13643 230 DVFQ 233 (288)
T ss_pred HHHc
Confidence 8754
No 378
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.5e-35 Score=349.03 Aligned_cols=201 Identities=30% Similarity=0.409 Sum_probs=169.2
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------c
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 669 (1455)
.++++|++++|.. ..+|+|+||++++||+++|+|||||||||||++|+|..+|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ 77 (353)
T TIGR03265 4 YLSIDNIRKRFGA------FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRD 77 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 4789999999853 2259999999999999999999999999999999999999999999976 4
Q ss_pred EEEEcCCCCCCC-cCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 670 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 670 i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
++||+|++-+|. .||+|||.|+.. .+. ++.+++++..+|+.. ......+|||||||||+||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~-----------~~~~~~~LSgGq~QRvaLA 146 (353)
T TIGR03265 78 YGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGS-----------ERKYPGQLSGGQQQRVALA 146 (353)
T ss_pred EEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCch-----------hhCChhhCCHHHHHHHHHH
Confidence 999999999986 599999998742 222 344555665555432 2355679999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 819 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1455)
|||+.+|+++|||||||+||+.+.+++.+. +.... ..+.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 147 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 147 RALATSPGLLLLDEPLSALDARVREHLRTE-IRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999988776 33211 23789999999999865 5999999999999999999998754
No 379
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2e-35 Score=300.99 Aligned_cols=193 Identities=25% Similarity=0.379 Sum_probs=167.2
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
|+|+|++-.|+.. .++|+|+||+|++||++.++||||||||||+|+|.++..|+.|+|.++|
T Consensus 2 I~f~~V~k~Y~~g-----~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~ 76 (223)
T COG2884 2 IRFENVSKAYPGG-----REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPF 76 (223)
T ss_pred eeehhhhhhcCCC-----chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccch
Confidence 6889999999754 2359999999999999999999999999999999999999999999876
Q ss_pred ---cEEEEcCCCCCC-CcCHHHHhccCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 ---SIAYVPQVPWIL-SGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~-~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
+||+|+|+--|. .-||.||+.|... .. +++..++++..+|.+....+|. .||||+|||
T Consensus 77 LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQR 145 (223)
T COG2884 77 LRRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQR 145 (223)
T ss_pred hhheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHH
Confidence 699999999865 4599999998643 22 2456678888899888888775 899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEec
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1455)
|+||||+..+|++||-||||-+|||..+..|++- +..-...|.||+++||+.+.+.. --+++.+++|+++...
T Consensus 146 vaIARAiV~~P~vLlADEPTGNLDp~~s~~im~l-feeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 146 VAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRL-FEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHHHHccCCCeEeecCCCCCCChHHHHHHHHH-HHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 9999999999999999999999999999999875 33324568899999999999987 5689999999998643
No 380
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-35 Score=340.45 Aligned_cols=207 Identities=28% Similarity=0.443 Sum_probs=169.5
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|+++.|+.... ..+++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13637 2 SIKIENLTHIYMEGTP-FEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSD 80 (287)
T ss_pred EEEEEEEEEECCCCCc-cccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHH
Confidence 4789999999964211 112469999999999999999999999999999999999999999998865
Q ss_pred ---cEEEEcCCC--CCCCcCHHHHhccCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHH
Q 000511 669 ---SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 736 (1455)
Q Consensus 669 ---~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkq 736 (1455)
.||||+|+| .+++.|++|||.|+.. .+++ +..++++.++|.. .+........|||||||
T Consensus 81 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~q 151 (287)
T PRK13637 81 IRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGGQKR 151 (287)
T ss_pred HhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHHHHH
Confidence 389999998 5778899999998632 2332 3455666666641 11234566799999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHH
Q 000511 737 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 814 (1455)
Q Consensus 737 RvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 814 (1455)
|++|||||+.+|+++||||||++||+.+.+++.+. +..... .++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~ 230 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNK-IKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPR 230 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999988776 333122 3789999999999875 59999999999999999998
Q ss_pred HHHh
Q 000511 815 DLAV 818 (1455)
Q Consensus 815 ~l~~ 818 (1455)
++..
T Consensus 231 ~~~~ 234 (287)
T PRK13637 231 EVFK 234 (287)
T ss_pred HHHh
Confidence 8754
No 381
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=341.23 Aligned_cols=205 Identities=27% Similarity=0.416 Sum_probs=169.8
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|++++|+.... ...++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 3 l~~~~l~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 3 ITFQKVEHRYQYKTP-FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEECCCCc-ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 689999999964221 112469999999999999999999999999999999999999999998876
Q ss_pred ----cEEEEcCCC--CCCCcCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000511 669 ----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1455)
Q Consensus 669 ----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQk 735 (1455)
.|+||+|+| .+++.||+|||.|+.. .++ ++..++++.++|..++. ......||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~----------~~~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL----------ARSPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh----------hCCcccCCHHHH
Confidence 389999998 5888899999988632 222 34566677777754332 345568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccc-cCCEEEEEeCCeEEEecCH
Q 000511 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 813 (1455)
Q Consensus 736 qRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~ 813 (1455)
|||+|||||+.+|+++||||||++||+.+.+.+.+. +..... .|.|+|++||+++.+. .||+|++|++|++++.|++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~-L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~ 230 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEM-FYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTP 230 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999988776 332112 3789999999999876 5999999999999999999
Q ss_pred HHHHh
Q 000511 814 ADLAV 818 (1455)
Q Consensus 814 ~~l~~ 818 (1455)
+++..
T Consensus 231 ~~~~~ 235 (290)
T PRK13634 231 REIFA 235 (290)
T ss_pred HHHhc
Confidence 88753
No 382
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-35 Score=371.74 Aligned_cols=221 Identities=24% Similarity=0.352 Sum_probs=180.1
Q ss_pred cEEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCC----------
Q 000511 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII---------- 1285 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~---------- 1285 (1455)
.|+++|++++|+.. ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 69999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred CCChH---HHh-cccEEEeCCC--CCCCC-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCc---hhhhcCC
Q 000511 1286 NTPVR---DLR-GRFAVVPQSP--FLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESG 1351 (1455)
Q Consensus 1286 ~i~~~---~lR-~~i~~VpQdp--~lf~g-TIreNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G 1351 (1455)
+.+.. .+| ++|++|+|+| .+++. ||++|+.... ..+..+.. ..+.+.++.+|++ .......
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~gL~~~~~~~~~~~ 166 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM-----VEAKRMLDQVRIPEAQTILSRYP 166 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHCCCCChhhHHhCCC
Confidence 22322 344 5799999999 57764 9999996421 11221211 1122334444663 3456667
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-C-CcEEEEeccChhhHhh-hCEEEEEeCCe
Q 000511 1352 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-K-GMTVITIAHRISTVLN-MDEILILDHGH 1428 (1455)
Q Consensus 1352 ~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1428 (1455)
.+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. + ++|||+|||+++.+.. ||||++|++|+
T Consensus 167 ~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~ 246 (623)
T PRK10261 167 HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGE 246 (623)
T ss_pred ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCe
Confidence 7899999999999999999999999999999999999999999998864 3 7899999999999865 89999999999
Q ss_pred EEEeCChhHHhccCC
Q 000511 1429 LVEQGNPQTLLQDEC 1443 (1455)
Q Consensus 1429 ive~G~p~eLl~~~~ 1443 (1455)
|++.|++++++..+.
T Consensus 247 i~~~g~~~~~~~~~~ 261 (623)
T PRK10261 247 AVETGSVEQIFHAPQ 261 (623)
T ss_pred ecccCCHHHhhcCCC
Confidence 999999999986554
No 383
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-35 Score=365.57 Aligned_cols=211 Identities=24% Similarity=0.384 Sum_probs=177.7
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh-HHHhccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~-~~lR~~i 1296 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. +.+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 369999999999999999999999999999999999999999999999999976543 4567889
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCC------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
+||||+|.+|++ |+++|+..... .+..+.. ..+.+.++.+|++.........||||||||++||||++
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~ 156 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALA 156 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHH
Confidence 999999998876 99999975321 1111111 12334555557765455556689999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCCh
Q 000511 1370 KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p 1435 (1455)
++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.+++
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 157 RNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred hCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999998764 47899999999999876 899999999999977654
No 384
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-32 Score=304.32 Aligned_cols=507 Identities=16% Similarity=0.146 Sum_probs=326.6
Q ss_pred hHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000511 265 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGY-VLAIALGLTSILKSFFDTQYSFHLSKLK 343 (1455)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 343 (1455)
+...++|.++|+++....+.++....+. .++-.+-+++.+......++ .+.+++.+..++.+.. ......-+|
T Consensus 3 ~ll~llr~nr~~~i~~~a~s~a~g~~g~---~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~i---s~lg~t~~g 76 (546)
T COG4615 3 LLLLLLRQNRWPFISVMALSLASGALGI---GLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLI---SQLGLTTLG 76 (546)
T ss_pred hHHHHhcccccHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 3457888899988887766665544333 22222223332211111111 1222222222222221 122233334
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000511 344 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 423 (1455)
Q Consensus 344 ~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~g~~v 423 (1455)
..+-..+...+-+|.+.-|....++..++.++.-.+.|+..|...+..+.++.-+.+-+..+...|++.-+..++..++.
T Consensus 77 q~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~ 156 (546)
T COG4615 77 QHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVW 156 (546)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 44444455556678888887777777888999999999999987777777666554444444555555555566666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000511 424 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWE--QIFSSWLMKTRSSEVKHLSTRKYLDAWC- 500 (1455)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e--~~~~~~i~~~R~~El~~~~~~~~~~~~~- 500 (1455)
+++.+..+++...+..++.....+.-|+-.+..+.++.|-|..|...-- ..+.+.+..- .+|.+. +..+...+.
T Consensus 157 ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~-a~~~r~--~~~~~n~f~~ 233 (546)
T COG4615 157 IVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPD-AQEYRH--HIIRANTFHL 233 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcc-hHHHHh--hhhhhhHHHH
Confidence 6677777888888888888888889999999999999999999987632 1111111110 111111 111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC-CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCch-hh
Q 000511 501 VFFWATTPTLFSLFTFGLFALMGHQL-DAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH-EL 578 (1455)
Q Consensus 501 ~~~~~~~~~~~~~~~f~~~~~~~~~L-~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~-~~ 578 (1455)
.........+..++....|+...-.. +...+.|....+-.++.|+.++...+|.+..|.++++||.++=..|+..+ ..
T Consensus 234 la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~ 313 (546)
T COG4615 234 LAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFPR 313 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCC
Confidence 11111222233333333333222112 22244454455667889999999999999999999999998765443322 11
Q ss_pred hhhcCCCCcccCCCccCCCCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc
Q 000511 579 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 658 (1455)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~ 658 (1455)
.+ . .++-..++++|+.|+|.+. .+-+.-||++|++||++.|+|.||||||||+++++|.++
T Consensus 314 ~q--~------------~p~~~~lelrnvrfay~~~-----~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~ 374 (546)
T COG4615 314 PQ--A------------FPDWKTLELRNVRFAYQDN-----AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQ 374 (546)
T ss_pred CC--c------------CCcccceeeeeeeeccCcc-----cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccC
Confidence 00 0 0123468999999999753 244889999999999999999999999999999999999
Q ss_pred CCCcEEEEcCc-------------EEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCccccc
Q 000511 659 LTHGSIHASGS-------------IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIG 724 (1455)
Q Consensus 659 ~~~G~i~~~~~-------------i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig 724 (1455)
|++|+|.++|. ++-|.-|-|||..+ ..++. ..++...+-++.-.+.... .+.+|.-+
T Consensus 375 PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~l-----l~~e~~as~q~i~~~LqrLel~~kt-sl~d~~fs--- 445 (546)
T COG4615 375 PQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQL-----LGPEGKASPQLIEKWLQRLELAHKT-SLNDGRFS--- 445 (546)
T ss_pred CCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhh-----hCCccCCChHHHHHHHHHHHHhhhh-cccCCccc---
Confidence 99999999983 23344445555432 22222 3445444444444443322 22233222
Q ss_pred CCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeC
Q 000511 725 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 804 (1455)
Q Consensus 725 ~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~ 804 (1455)
...||-|||.|+|+--|+.-+.|||++||=-+-=||+-.++..+..+-.....|||++.||||-.+...|||++.|++
T Consensus 446 --~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~ 523 (546)
T COG4615 446 --NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRN 523 (546)
T ss_pred --ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhc
Confidence 246999999999999999999999999999999999988887776432224569999999999999999999999999
Q ss_pred CeEEEe
Q 000511 805 GQVKWI 810 (1455)
Q Consensus 805 G~i~~~ 810 (1455)
|++++.
T Consensus 524 G~~~e~ 529 (546)
T COG4615 524 GQLSEL 529 (546)
T ss_pred Cceeec
Confidence 999863
No 385
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=338.24 Aligned_cols=203 Identities=29% Similarity=0.404 Sum_probs=169.5
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|++++|+.... .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13650 4 IIEVKNLTFKYKEDQE---KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIR 80 (279)
T ss_pred eEEEEeEEEEcCCCCc---CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHH
Confidence 4789999999964211 2359999999999999999999999999999999999999999998876
Q ss_pred -cEEEEcCCCC--CCCcCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000511 669 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1455)
Q Consensus 669 -~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 738 (1455)
.++|++|+|. ++..||+|||.|+.. .++ ++..++++..+|+...+ ....+||||||||+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qrv 149 (279)
T PRK13650 81 HKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKE-----------REPARLSGGQKQRV 149 (279)
T ss_pred hhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHH
Confidence 4899999984 566799999998732 232 34566677777754333 34468999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHH
Q 000511 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 817 (1455)
Q Consensus 739 alARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 817 (1455)
+||||++.+|+++||||||++||+.+.+.+++. +..... .|+|+|++||+++.+..||+|++|++|+++..|+++++.
T Consensus 150 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 150 AIAGAVAMRPKIIILDEATSMLDPEGRLELIKT-IKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999998888775 333122 378999999999998789999999999999999998875
Q ss_pred h
Q 000511 818 V 818 (1455)
Q Consensus 818 ~ 818 (1455)
.
T Consensus 229 ~ 229 (279)
T PRK13650 229 S 229 (279)
T ss_pred c
Confidence 4
No 386
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-35 Score=365.39 Aligned_cols=212 Identities=24% Similarity=0.348 Sum_probs=179.3
Q ss_pred EEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCCh-HHHhcccEEE
Q 000511 1221 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFAVV 1299 (1455)
Q Consensus 1221 f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~-~~lR~~i~~V 1299 (1455)
++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+|++++||
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999963 469999999999999999999999999999999999999999999999999976654 4467889999
Q ss_pred eCCCCCCCC-cHHHhcCcCCC------CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1300 PQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1300 pQdp~lf~g-TIreNLdp~~~------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
||++.+|.. |+++|+..... .+.++.++ ...+.++.+|++........+||||||||++|||||+++|
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p 153 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKAFSYNA 153 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHHhCC
Confidence 999987764 99999975321 12222221 2334455567766666667789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 154 ~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 154 KIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 9999999999999999999999998753 47899999999999875 8999999999999999988874
No 387
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=9.2e-35 Score=321.89 Aligned_cols=189 Identities=29% Similarity=0.435 Sum_probs=161.3
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|+++.|+... .++++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~~~----~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 5 GEIEVENLSVRYAPDL----PPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CeEEEEEEEEEeCCCC----cccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 4588999999996421 2359999999999999999999999999999999999999999999875
Q ss_pred --cEEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHcc
Q 000511 669 --SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 746 (1455)
Q Consensus 669 --~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 746 (1455)
.++||+|+|.++++|++||+.+...+++++..+ ++. ++++...||||||||++||||++.
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~---~l~---------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYG---ALR---------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHH---Hhh---------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 499999999999999999998755444333222 221 345678999999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecC
Q 000511 747 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 812 (1455)
Q Consensus 747 ~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 812 (1455)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..||++++|++|++.+.|+
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKT-IRE-EFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 9999999999999999998887775 433 345789999999999988899999999999988775
No 388
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=346.29 Aligned_cols=201 Identities=32% Similarity=0.435 Sum_probs=167.5
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------c
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 669 (1455)
.++++|+++.|.. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 ~L~i~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ 75 (353)
T PRK10851 2 SIEIANIKKSFGR------TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRK 75 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCC
Confidence 3688999999853 1359999999999999999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCC-cCHHHHhccCCC-------CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 670 IAYVPQVPWILS-GTIRDNILFGKN-------YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 670 i~y~~Q~p~l~~-~ti~~nI~~g~~-------~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
++||+|++.++. .|++|||.|+.. .+. ++..+.++..++.... .....+||||||||
T Consensus 76 i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LSgGq~QR 144 (353)
T PRK10851 76 VGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLA-----------DRYPAQLSGGQKQR 144 (353)
T ss_pred EEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHH
Confidence 999999999987 499999998743 121 2344455555554322 34556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 815 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 815 (1455)
|+|||||+.+|+++|||||||+||+.+.+.+.+. +.... ..+.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 valArAL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~ 223 (353)
T PRK10851 145 VALARALAVEPQILLLDEPFGALDAQVRKELRRW-LRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQ 223 (353)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999888776 33312 236899999999998665 99999999999999999999
Q ss_pred HHhc
Q 000511 816 LAVS 819 (1455)
Q Consensus 816 l~~~ 819 (1455)
+...
T Consensus 224 i~~~ 227 (353)
T PRK10851 224 VWRE 227 (353)
T ss_pred HHhC
Confidence 8653
No 389
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.1e-35 Score=321.89 Aligned_cols=193 Identities=20% Similarity=0.249 Sum_probs=162.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 689999999964 369999999999999999999999999999999999999999999999999875 34577899999
Q ss_pred EeCCCCCCC-CcHHHhcCcCCCC--ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000511 1299 VPQSPFLFE-GSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1455)
Q Consensus 1299 VpQdp~lf~-gTIreNLdp~~~~--~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~IL 1375 (1455)
+||++.+++ .|+++|+...... .+.+ +.+.++.++++...+....+||+|||||++||||++++|++|
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~---------~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~~l 149 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVG---------ITELCRLFSLEHLIDYPCGLLSSGQKRQVALLRLWMSKAKLW 149 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHH---------HHHHHHHcCCchhhhCChhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 999998874 6999998643211 1222 334444445544444444579999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhhCEEEE
Q 000511 1376 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILI 1423 (1455)
Q Consensus 1376 lLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~v 1423 (1455)
||||||++||..+.+.+.+.|++.. +++|+|++||+.+.+.+||.-++
T Consensus 150 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 150 LLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 9999999999999999999998753 57899999999999999987554
No 390
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-35 Score=330.49 Aligned_cols=198 Identities=33% Similarity=0.455 Sum_probs=164.0
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------cE
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 670 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 670 (1455)
++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 3 l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i 76 (239)
T cd03296 3 IEVRNVSKRFGD---F---VALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNV 76 (239)
T ss_pred EEEEeEEEEECC---E---EeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccce
Confidence 678999999853 2 359999999999999999999999999999999999999999998875 48
Q ss_pred EEEcCCCCCCC-cCHHHHhccCCCC-------CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000511 671 AYVPQVPWILS-GTIRDNILFGKNY-------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1455)
Q Consensus 671 ~y~~Q~p~l~~-~ti~~nI~~g~~~-------~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 738 (1455)
+|++|+|.++. .|++||+.++... +. ++..+.++.++++.. ......+||||||||+
T Consensus 77 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl 145 (239)
T cd03296 77 GFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWL-----------ADRYPAQLSGGQRQRV 145 (239)
T ss_pred EEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhh-----------hhcChhhCCHHHHHHH
Confidence 99999999886 5999999876321 21 223444555555322 2345568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHH
Q 000511 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 739 alARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1455)
+||||++.+|+++||||||++||+++.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 224 (239)
T cd03296 146 ALARALAVEPKVLLLDEPFGALDAKVRKELRRW-LRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEV 224 (239)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHH
Confidence 999999999999999999999999999888775 333122 37899999999998764 999999999999999998887
Q ss_pred H
Q 000511 817 A 817 (1455)
Q Consensus 817 ~ 817 (1455)
.
T Consensus 225 ~ 225 (239)
T cd03296 225 Y 225 (239)
T ss_pred h
Confidence 4
No 391
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.1e-35 Score=330.56 Aligned_cols=197 Identities=28% Similarity=0.396 Sum_probs=162.0
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc-----cCCCcEEEEcC--------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM-----MLTHGSIHASG-------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~-----~~~~G~i~~~~-------- 668 (1455)
++++|+++.|.. +++|+|+||++++||+++|+||||||||||+++|+|.+ +|++|+|.++|
T Consensus 1 i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~ 74 (227)
T cd03260 1 IELRDLNVYYGD------KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDV 74 (227)
T ss_pred CEEEEEEEEcCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcch
Confidence 357889998853 23599999999999999999999999999999999999 99999998865
Q ss_pred -------cEEEEcCCCCCCCcCHHHHhccCCCC----C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000511 669 -------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1455)
Q Consensus 669 -------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGG 733 (1455)
.++|++|++.+++.|++||+.++... + +++..++++.+++...+...++ +.+||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG 145 (227)
T cd03260 75 DVLELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGG 145 (227)
T ss_pred HHHHHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHH
Confidence 38999999998878999999875321 1 2344556666666543332211 4689999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEecC
Q 000511 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 812 (1455)
Q Consensus 734 QkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~ 812 (1455)
||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||++++|++|++++.|+
T Consensus 146 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 223 (227)
T cd03260 146 QQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEEL-IAE-LKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGP 223 (227)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecC
Confidence 99999999999999999999999999999999988876 333 223389999999999876 499999999999999887
Q ss_pred HHH
Q 000511 813 SAD 815 (1455)
Q Consensus 813 ~~~ 815 (1455)
+++
T Consensus 224 ~~~ 226 (227)
T cd03260 224 TEQ 226 (227)
T ss_pred ccc
Confidence 654
No 392
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=2.4e-34 Score=325.46 Aligned_cols=176 Identities=22% Similarity=0.292 Sum_probs=133.4
Q ss_pred EEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCC-CCCCcHHHhcCcCCC-
Q 000511 1242 TIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-LFEGSLRDNLDPFHM- 1319 (1455)
Q Consensus 1242 ~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~-lf~gTIreNLdp~~~- 1319 (1455)
+|..||.+|++||+|-||||++++|.|.++|++|+ ..+ -+++|=||--. -|+|||++-|.--..
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~----------~~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED----------LKVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc----------ceEeecceeecCCCCCcHHHHHHHhhhh
Confidence 44567899999999999999999999999999998 222 26888888542 388999987632111
Q ss_pred -CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHH
Q 000511 1320 -NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISS 1398 (1455)
Q Consensus 1320 -~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~ 1398 (1455)
+.+.-.+ .+.++.+.|+..+...-.+|||||.||++||-||.|++++.+||||++.||.+-.-.+-++||+
T Consensus 429 ~~~~s~~~--------~ei~~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakvIRR 500 (591)
T COG1245 429 AFGSSYFK--------TEIVKPLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKVIRR 500 (591)
T ss_pred hcccchhH--------HhhcCccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHHHHH
Confidence 1111111 1233344666666666668999999999999999999999999999999999999888999987
Q ss_pred hc--CCcEEEEeccChhhHhh-hCEEEEEeC--CeEEEeCChhHHh
Q 000511 1399 EC--KGMTVITIAHRISTVLN-MDEILILDH--GHLVEQGNPQTLL 1439 (1455)
Q Consensus 1399 ~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~--G~ive~G~p~eLl 1439 (1455)
.. .++|.++|-|++-.+.. +||++|.+. |+=-....|..+.
T Consensus 501 ~~e~~~kta~vVdHDi~~~dyvsDr~ivF~GePg~~g~a~~P~~mr 546 (591)
T COG1245 501 FIENNEKTALVVDHDIYMIDYVSDRLIVFEGEPGKHGHASPPMSMR 546 (591)
T ss_pred HHhhcCceEEEEecceehhhhhhceEEEEecCCCccCcCCCCccHH
Confidence 53 58899999999998865 799999963 3222233455554
No 393
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=8.3e-35 Score=326.86 Aligned_cols=205 Identities=27% Similarity=0.447 Sum_probs=173.5
Q ss_pred CCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC---------
Q 000511 598 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 668 (1455)
Q Consensus 598 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------- 668 (1455)
....++++|+++.|+.... .++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~ 84 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPD---TLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHK 84 (226)
T ss_pred cCceEEEEEEEEEeCCCCC---CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHH
Confidence 4467899999999964321 2359999999999999999999999999999999999999999999876
Q ss_pred ----cEEEEcCCCCCCCcCHHHHhccCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHH
Q 000511 669 ----SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 743 (1455)
Q Consensus 669 ----~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARa 743 (1455)
.++|++|+|.+++.|++||+.++.. .+...+.+..+...++.-++.++.|.++..+.+..+|||||||||+||||
T Consensus 85 ~~~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~lara 164 (226)
T cd03248 85 YLHSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARA 164 (226)
T ss_pred HHHhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHH
Confidence 3899999999999999999987643 22222333344455666778888788888899999999999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeE
Q 000511 744 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 807 (1455)
Q Consensus 744 ly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i 807 (1455)
++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||+|++|++|++
T Consensus 165 l~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 165 LIRNPQVLILDEATSALDAESEQQVQQA-LYD-WPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999988776 333 3446899999999999988999999999874
No 394
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.3e-35 Score=347.26 Aligned_cols=202 Identities=27% Similarity=0.385 Sum_probs=169.7
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC--cEEEEcC---------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH--GSIHASG--------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~--G~i~~~~--------- 668 (1455)
..++++|++++|.. . .+|+|+||++++|++++|+|||||||||||++|+|..+|++ |+|.++|
T Consensus 4 ~~l~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~ 77 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---N---TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH 77 (362)
T ss_pred eEEEEEEEEEEECC---e---EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH
Confidence 45889999999953 2 35999999999999999999999999999999999999999 9999876
Q ss_pred --cEEEEcCCCCCCCc-CHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000511 669 --SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1455)
Q Consensus 669 --~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 738 (1455)
.|+||+|++.+|.. ||+|||.|+.. .++ ++.+++++..+|+... .....+|||||||||
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~-----------~~~~~~LSgGq~QRv 146 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAA-----------AHLPAQLSGGMQQRI 146 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchh-----------hCChhhCCHHHHHHH
Confidence 49999999999865 99999998642 222 3455666666665433 334568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC--CceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHH
Q 000511 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML--QKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSAD 815 (1455)
Q Consensus 739 alARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~--~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~ 815 (1455)
+|||||..+|+++|||||||+||+...+++.+. +.....+ +.|+|+|||+.+.+. .||+|++|++|++++.|++++
T Consensus 147 aLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~-l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~ 225 (362)
T TIGR03258 147 AIARAIAIEPDVLLLDEPLSALDANIRANMREE-IAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQA 225 (362)
T ss_pred HHHHHHhcCCCEEEEcCccccCCHHHHHHHHHH-HHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 999999999999999999999999998888776 3321222 689999999999865 599999999999999999999
Q ss_pred HHhc
Q 000511 816 LAVS 819 (1455)
Q Consensus 816 l~~~ 819 (1455)
+...
T Consensus 226 ~~~~ 229 (362)
T TIGR03258 226 LYDA 229 (362)
T ss_pred HHhC
Confidence 8654
No 395
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-35 Score=331.80 Aligned_cols=203 Identities=22% Similarity=0.293 Sum_probs=170.0
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc---CCCcEEEEcC---------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM---LTHGSIHASG--------- 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~---~~~G~i~~~~--------- 668 (1455)
.++++|+++.|+. . ++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|
T Consensus 2 ~~~~~~l~~~~~~---~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~ 75 (246)
T PRK14269 2 IAKTTNLNLFYGK---K---QALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVV 75 (246)
T ss_pred ceeeeeeEEEECC---E---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHH
Confidence 4678999999952 2 35999999999999999999999999999999999974 6899999876
Q ss_pred ----cEEEEcCCCCCCCcCHHHHhccCCCC---------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000511 669 ----SIAYVPQVPWILSGTIRDNILFGKNY---------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1455)
Q Consensus 669 ----~i~y~~Q~p~l~~~ti~~nI~~g~~~---------~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQk 735 (1455)
.++|++|+|.+++.|++||+.++... ++++..++++.+++...+.. ...+++.+||||||
T Consensus 76 ~~~~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 148 (246)
T PRK14269 76 ALRKNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQ 148 (246)
T ss_pred HHhhhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHH
Confidence 48999999999999999999875311 12245567777777554432 23456779999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHH
Q 000511 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 814 (1455)
Q Consensus 736 qRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 814 (1455)
|||+||||++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 149 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 226 (246)
T PRK14269 149 QRLCIARALAIKPKLLLLDEPTSALDPISSGVIEEL-LKE-LSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESK 226 (246)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999998888776 433 345789999999999876 59999999999999999988
Q ss_pred HHHh
Q 000511 815 DLAV 818 (1455)
Q Consensus 815 ~l~~ 818 (1455)
++..
T Consensus 227 ~~~~ 230 (246)
T PRK14269 227 EFFE 230 (246)
T ss_pred HHHh
Confidence 8753
No 396
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.6e-35 Score=323.47 Aligned_cols=195 Identities=24% Similarity=0.310 Sum_probs=164.2
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.++++|++++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNE--EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCC--ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 6999999999964 3699999999999999999999999999999999999999999999999998752 3456799
Q ss_pred EEeCCCCCCCC-cHHHhcCcCC----CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1298 VVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1298 ~VpQdp~lf~g-TIreNLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
|+||+|.++++ |++||+.... ...++.+.+.++.. |++.........||+|||||++||||++++|
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIV---------GLAGYEDTLVRQLSAGQKKRLALARLWLSPA 156 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHc---------CChhhccCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999887 9999985421 11122233333333 4444444555679999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeC
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDH 1426 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~ 1426 (1455)
++|+|||||++||.++.+.+.+.+++.. +++|+|++||+++.+.+ ||++++++.
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 157 PLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999999998653 47899999999999875 799999975
No 397
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.2e-33 Score=364.04 Aligned_cols=214 Identities=25% Similarity=0.338 Sum_probs=148.1
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHh------cCCC----C-----------CCce
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALF------RLTP----I-----------CGGQ 1276 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~------rl~~----~-----------~~G~ 1276 (1455)
.++++|++. ..|+|+||+|++||.+||+|+||||||||++-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 588888862 2599999999999999999999999999998333 1111 1 1123
Q ss_pred EEECCEeCCCCCh----------HHHhcccEEEeCC------CCCCCC--------------cHHHhcCcC---------
Q 000511 1277 ILVDGLNIINTPV----------RDLRGRFAVVPQS------PFLFEG--------------SLRDNLDPF--------- 1317 (1455)
Q Consensus 1277 I~IdG~di~~i~~----------~~lR~~i~~VpQd------p~lf~g--------------TIreNLdp~--------- 1317 (1455)
|.||..+|..-++ +.+|.-++=.|+- +-.|+- .+.-++.+.
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 6666666643332 2455555544431 222221 111111000
Q ss_pred ---CCCChH-----------------HHHHHHHHh-------cHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHc
Q 000511 1318 ---HMNDDL-----------------KIWSVLEKC-------HVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1369 (1455)
Q Consensus 1318 ---~~~~d~-----------------ei~~aL~~~-------~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARAlL 1369 (1455)
..+.++ .+.++++-. ...+.++.+||+. .++.....|||||+||++|||+|.
T Consensus 765 C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~ 844 (924)
T TIGR00630 765 CKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELS 844 (924)
T ss_pred cCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHh
Confidence 001111 011111110 1112333448875 477788899999999999999999
Q ss_pred c---CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhhCEEEEE------eCCeEEEeCChhHH
Q 000511 1370 K---SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL------DHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1370 r---~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~vl------~~G~ive~G~p~eL 1438 (1455)
+ +|+++||||||++||..+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++
T Consensus 845 ~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 845 KRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 7 589999999999999999999999998764 588999999999999999999999 79999999999986
No 398
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=349.04 Aligned_cols=200 Identities=28% Similarity=0.408 Sum_probs=168.0
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------c
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 669 (1455)
.++++|++++|.. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 3 ~l~i~~l~~~~~~---~---~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~ 76 (369)
T PRK11000 3 SVTLRNVTKAYGD---V---VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERG 76 (369)
T ss_pred EEEEEEEEEEeCC---e---EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCC
Confidence 3789999999853 2 359999999999999999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCc-CHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 670 IAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 670 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
|+||+|++.++.. ||+|||.|+.. .+. ++..++++.++++... .....+|||||||||+||
T Consensus 77 i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-----------~~~~~~LSgGq~QRvaLA 145 (369)
T PRK11000 77 VGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLL-----------DRKPKALSGGQRQRVAIG 145 (369)
T ss_pred EEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------cCChhhCCHHHHHHHHHH
Confidence 9999999998865 99999998642 222 3455666766665433 234468999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHHHh
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
|||+.+|+++|||||||+||+...+.+.+. +..... .+.|+|+|||+++.+. .||+|++|++|++.+.|+++++..
T Consensus 146 raL~~~P~lLLLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~ 223 (369)
T PRK11000 146 RTLVAEPSVFLLDEPLSNLDAALRVQMRIE-ISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYH 223 (369)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999998888775 332122 3789999999999876 599999999999999999998854
No 399
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-35 Score=319.72 Aligned_cols=196 Identities=27% Similarity=0.434 Sum_probs=168.5
Q ss_pred cEEEEEEEEEecCCC-------CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH
Q 000511 1218 LIEFQNVTMRYKPSL-------PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~-------~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~ 1290 (1455)
.++++|++..|+... -.+++||||+|++||.+||||.|||||||+.++|+|+++|++|+|.++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 478999999996432 26899999999999999999999999999999999999999999999999987766
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr 1370 (1455)
....++++.+.|+++|+.+. ........||||||||++|||||.-
T Consensus 82 ---------------------------~~~~~~~v~elL~~Vgl~~~--------~~~ryPhelSGGQrQRi~IARALal 126 (268)
T COG4608 82 ---------------------------KEERRERVLELLEKVGLPEE--------FLYRYPHELSGGQRQRIGIARALAL 126 (268)
T ss_pred ---------------------------hhHHHHHHHHHHHHhCCCHH--------HhhcCCcccCchhhhhHHHHHHHhh
Confidence 11123456677777765432 2344556799999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHHH
Q 000511 1371 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1447 (1455)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~ 1447 (1455)
+|++++.|||||+||.-.++.|.+.+.+.- .+-|.++|||+++.++. ||||.||..|+|||.|+-+++.+++...|-
T Consensus 127 ~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~p~HpYT 206 (268)
T COG4608 127 NPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSNPLHPYT 206 (268)
T ss_pred CCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhCCCCHHH
Confidence 999999999999999999999999887653 38899999999999987 899999999999999999999998877776
Q ss_pred HHH
Q 000511 1448 SFV 1450 (1455)
Q Consensus 1448 ~l~ 1450 (1455)
+..
T Consensus 207 k~L 209 (268)
T COG4608 207 KAL 209 (268)
T ss_pred HHH
Confidence 554
No 400
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=8.2e-35 Score=363.78 Aligned_cols=212 Identities=19% Similarity=0.260 Sum_probs=180.2
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|++++
T Consensus 3 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSD--TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCC--eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 3899999999964 35999999999999999999999999999999999999999999999999887777777888899
Q ss_pred EEeCCCCC--C-------CCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1298 VVPQSPFL--F-------EGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1298 ~VpQdp~l--f-------~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
++||++.+ + .-|+++|+.... ..++++.++++.. |++.........||||||||++|||||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgG~~qrv~la~al 150 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDEV-KDPARCEQLAQQF---------GITALLDRRFKYLSTGETRKTLLCQAL 150 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccch-hHHHHHHHHHHHc---------CCHhhhhCCcccCCHHHHHHHHHHHHH
Confidence 99999753 2 348899886431 1123344444444 554444555668999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhcc
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1441 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~ 1441 (1455)
+++|++|+|||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|++++++++
T Consensus 151 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 225 (490)
T PRK10938 151 MSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQ 225 (490)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcc
Confidence 99999999999999999999999999998764 37899999999999876 899999999999999999998764
No 401
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=4.1e-34 Score=381.39 Aligned_cols=211 Identities=24% Similarity=0.288 Sum_probs=155.0
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHH---------HHhcCCCCCC----c----eEEEC
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILN---------ALFRLTPICG----G----QILVD 1280 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~---------~L~rl~~~~~----G----~I~Id 1280 (1455)
.++++|++. ..|+|+|++|++||.+||.|+||||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 578888762 2799999999999999999999999999999 4445332211 1 24666
Q ss_pred CEeCCCCCh----------HHHhc---------c-----cEEEeCC------------------C---------------
Q 000511 1281 GLNIINTPV----------RDLRG---------R-----FAVVPQS------------------P--------------- 1303 (1455)
Q Consensus 1281 G~di~~i~~----------~~lR~---------~-----i~~VpQd------------------p--------------- 1303 (1455)
..++..-+. +++|+ + ..+..|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 665544322 14441 1 1112221 1
Q ss_pred -----CCCCC-cHHHhcCcCCC-----C-ChHHHHHHHHHhcHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHHHHc-
Q 000511 1304 -----FLFEG-SLRDNLDPFHM-----N-DDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLARALL- 1369 (1455)
Q Consensus 1304 -----~lf~g-TIreNLdp~~~-----~-~d~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQrl~LARAlL- 1369 (1455)
+.+.+ ||.|||++... . +.+++.+.+ +.++.+||+.. .+.....||||||||++|||||+
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l------~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~ 826 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKI------HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLA 826 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHH------HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhh
Confidence 13334 78888866421 0 112232222 23444588765 68888899999999999999998
Q ss_pred --cCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhhCEEEEEe------CCeEEEeCChhHHhc
Q 000511 1370 --KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILD------HGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1370 --r~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~------~G~ive~G~p~eLl~ 1440 (1455)
++|+++||||||++||..+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|++++.|+|+++..
T Consensus 827 ~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpeel~~ 906 (1809)
T PRK00635 827 PSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPEELIH 906 (1809)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHHHHHh
Confidence 5999999999999999999999999998764 5889999999999998899999996 799999999999986
Q ss_pred c
Q 000511 1441 D 1441 (1455)
Q Consensus 1441 ~ 1441 (1455)
.
T Consensus 907 ~ 907 (1809)
T PRK00635 907 L 907 (1809)
T ss_pred c
Confidence 3
No 402
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=8.5e-35 Score=393.90 Aligned_cols=220 Identities=24% Similarity=0.324 Sum_probs=190.5
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
..|+++|++++|+++..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.++|.|+.. +....|+++
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~I 1005 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSL 1005 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcE
Confidence 3699999999996444579999999999999999999999999999999999999999999999999975 567789999
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
+++||++.+|+. |++|||.++.. .+.++..+ ...+.++.+||+...+....+||||||||++|||||+.+|
T Consensus 1006 G~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~vgL~~~~~~~~~~LSGGqKQRLsLArALi~~P 1080 (2272)
T TIGR01257 1006 GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDA 1080 (2272)
T ss_pred EEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999999999975 99999975421 12222211 1234445557776667777789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccC
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1442 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~ 1442 (1455)
+||+||||||+||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++++|.++-
T Consensus 1081 kVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~ 1151 (2272)
T TIGR01257 1081 KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCF 1151 (2272)
T ss_pred CEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhc
Confidence 999999999999999999999999988779999999999999975 8999999999999999999997643
No 403
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-35 Score=339.44 Aligned_cols=206 Identities=22% Similarity=0.333 Sum_probs=168.5
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|++++|+.... ....+|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (305)
T PRK13651 2 QIKVKNIVKIFNKKLP-TELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEK 80 (305)
T ss_pred EEEEEEEEEEECCCCC-ccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccc
Confidence 3789999999964321 112469999999999999999999999999999999999999999998742
Q ss_pred -------------------------cEEEEcCCC--CCCCcCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhh
Q 000511 669 -------------------------SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISL 714 (1455)
Q Consensus 669 -------------------------~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~ 714 (1455)
.||||+|+| .++..||+|||.|+.. .++ ++..++++.++|..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-- 158 (305)
T PRK13651 81 EKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY-- 158 (305)
T ss_pred cccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh--
Confidence 379999987 5778899999998742 232 2345566666664322
Q ss_pred ccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc
Q 000511 715 MVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS 794 (1455)
Q Consensus 715 l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~ 794 (1455)
.+....+||||||||++|||||+.+|+++||||||++||+...+.+.+. +......|+|+|++||+++.+.
T Consensus 159 --------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivtHd~~~~~ 229 (305)
T PRK13651 159 --------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEI-FDNLNKQGKTIILVTHDLDNVL 229 (305)
T ss_pred --------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeeCHHHHH
Confidence 2355679999999999999999999999999999999999998888775 3321234789999999999865
Q ss_pred -cCCEEEEEeCCeEEEecCHHHHHh
Q 000511 795 -AADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 795 -~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
.||+|++|++|++++.|+++++..
T Consensus 230 ~~adrv~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 230 EWTKRTIFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred HhCCEEEEEECCEEEEECCHHHHhc
Confidence 599999999999999999988754
No 404
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.7e-34 Score=361.88 Aligned_cols=221 Identities=24% Similarity=0.398 Sum_probs=179.7
Q ss_pred cEEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC-----CCceEEECCEeCCCCChH
Q 000511 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTPVR 1290 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i~~~ 1290 (1455)
.|+++|++++|+.+ ..++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 58999999999632 24699999999999999999999999999999999999987 799999999999877654
Q ss_pred H---Hh-cccEEEeCCCC--CCC-CcHHHhcCcC----CCCChHHHHHHHHHhcHHHHHHhCCCch---hhhcCCCCCCh
Q 000511 1291 D---LR-GRFAVVPQSPF--LFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLET---FVKESGISFSV 1356 (1455)
Q Consensus 1291 ~---lR-~~i~~VpQdp~--lf~-gTIreNLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLdt---~v~e~G~~LSg 1356 (1455)
. .| ++++||||+|. +++ -|+++|+... ...+.++.. ..+.+.++.+|++. .......+|||
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~~~~LSg 159 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAAR-----GEILNCLDRVGIRQAAKRLTDYPHQLSG 159 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHCCCCChHHHHhhCCcccCH
Confidence 3 34 57999999985 444 4899997521 111221111 11233344445542 23555668999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1357 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1357 GQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
|||||++|||||+.+|++||||||||+||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|
T Consensus 160 Ge~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g 239 (529)
T PRK15134 160 GERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQN 239 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999998853 37899999999999875 8999999999999999
Q ss_pred ChhHHhccCC
Q 000511 1434 NPQTLLQDEC 1443 (1455)
Q Consensus 1434 ~p~eLl~~~~ 1443 (1455)
++++++..+.
T Consensus 240 ~~~~~~~~~~ 249 (529)
T PRK15134 240 RAATLFSAPT 249 (529)
T ss_pred CHHHHhhCCC
Confidence 9999976543
No 405
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-35 Score=325.89 Aligned_cols=191 Identities=30% Similarity=0.406 Sum_probs=157.9
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------cEE
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SIA 671 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i~ 671 (1455)
+++|+++.|.. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 2 ~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~ 75 (213)
T cd03259 2 ELKGLSKTYGS---V---RALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIG 75 (213)
T ss_pred eeeeeEEEeCC---e---eeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEE
Confidence 57889998853 2 359999999999999999999999999999999999999999998875 489
Q ss_pred EEcCCCCCCC-cCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHH
Q 000511 672 YVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 743 (1455)
Q Consensus 672 y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARa 743 (1455)
|++|+|.++. .|++||+.++.. .+. ++..+.++.+++.... .....+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLL-----------NRYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHHHHHHH
Confidence 9999998875 599999987532 222 2345566666665433 33446899999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcccccc-CCEEEEEeCCeEEEec
Q 000511 744 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 744 ly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1455)
+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREE-LKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999988876 333122 37899999999998765 9999999999998754
No 406
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-35 Score=336.63 Aligned_cols=199 Identities=29% Similarity=0.391 Sum_probs=167.5
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|+++.|+.. .++|+|+||++++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~-----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 78 (274)
T PRK13647 4 IIEVEDLHFRYKDG-----TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVR 78 (274)
T ss_pred eEEEEEEEEEeCCC-----CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHH
Confidence 47899999999531 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCC--CCCCcCHHHHhccCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000511 669 -SIAYVPQVP--WILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1455)
Q Consensus 669 -~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 738 (1455)
.++|++|+| .+++.|++||+.|+.. .+ ++++.++++.+++...... ....||||||||+
T Consensus 79 ~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgG~~qrv 147 (274)
T PRK13647 79 SKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDK-----------PPYHLSYGQKKRV 147 (274)
T ss_pred hhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------ChhhCCHHHHHHH
Confidence 489999998 5788899999998632 22 2345667777777544333 3348999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHH
Q 000511 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 739 alARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l 816 (1455)
+||||+..+|+++||||||++||+.+.+++.+. +.....+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 148 ~laraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 148 AIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEI-LDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999988776 4331234789999999999985 5999999999999999998664
No 407
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-35 Score=338.20 Aligned_cols=206 Identities=23% Similarity=0.382 Sum_probs=167.8
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|++++|+.... ...++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (286)
T PRK13646 2 TIRFDNVSYTYQKGTP-YEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYI 80 (286)
T ss_pred EEEEEEEEEEECCCCc-cccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4789999999964221 112469999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCC--CCCCcCHHHHhccCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000511 669 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1455)
Q Consensus 669 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQ 734 (1455)
.||||+|+| .+++.|++|||.|+.. ++.+ +..+.++.++|+.+ .....+.+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq 150 (286)
T PRK13646 81 RPVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRD----------VMSQSPFQMSGGQ 150 (286)
T ss_pred HHHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHH
Confidence 379999998 5788899999998632 2332 23344445554322 1235677999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccc-cCCEEEEEeCCeEEEecC
Q 000511 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 812 (1455)
Q Consensus 735 kqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~ 812 (1455)
|||++||||++.+|+++||||||++||+.+.+++.+. +.... ..|+|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 151 ~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~ 229 (286)
T PRK13646 151 MRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRL-LKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTS 229 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999988775 33211 24789999999999875 599999999999999999
Q ss_pred HHHHHh
Q 000511 813 SADLAV 818 (1455)
Q Consensus 813 ~~~l~~ 818 (1455)
++++..
T Consensus 230 ~~~~~~ 235 (286)
T PRK13646 230 PKELFK 235 (286)
T ss_pred HHHHHh
Confidence 988754
No 408
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-35 Score=300.81 Aligned_cols=213 Identities=24% Similarity=0.353 Sum_probs=182.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
|+.+|++++-. .+.+|+++||+++|||.+||+||||||||||+++|.|.+.|++|++.++|.++++.+..++-++-++
T Consensus 2 i~a~nls~~~~--Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLA--GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEee--cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 67889987764 3469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCC-CCCcHHHhcCcCC----C---CChHH--HHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1299 VPQSPFL-FEGSLRDNLDPFH----M---NDDLK--IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1299 VpQdp~l-f~gTIreNLdp~~----~---~~d~e--i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
.||+..+ |+-|++|-+.++. . ..+++ ..+++.++++..+- +..-..|||||+||+.|||.|
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la---------~R~y~~LSGGEqQRVqlARvL 150 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLA---------GRDYRTLSGGEQQRVQLARVL 150 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhh---------ccchhhcCchHHHHHHHHHHH
Confidence 9999986 8999999986542 1 11333 45677777654321 222236999999999999999
Q ss_pred cc------CCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hhCEEEEEeCCeEEEeCChhHHhc
Q 000511 1369 LK------SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1369 Lr------~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
.+ ++++|+||||||+||..-...+.++.|+.. +++.|+.|-|+|+... .||||++|.+|||+..|+|++.+.
T Consensus 151 aQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~vlt 230 (259)
T COG4559 151 AQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDVLT 230 (259)
T ss_pred HHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHhcC
Confidence 86 357999999999999999999999998875 5899999999999765 589999999999999999999997
Q ss_pred cC
Q 000511 1441 DE 1442 (1455)
Q Consensus 1441 ~~ 1442 (1455)
.+
T Consensus 231 ~E 232 (259)
T COG4559 231 DE 232 (259)
T ss_pred HH
Confidence 54
No 409
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=5.5e-35 Score=330.63 Aligned_cols=197 Identities=25% Similarity=0.366 Sum_probs=162.5
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--------------
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 668 (1455)
+++|+++.|+. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (236)
T cd03219 2 EVRGLTKRFGG---L---VALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARL 75 (236)
T ss_pred eeeeeEEEECC---E---EEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhc
Confidence 57888998852 2 359999999999999999999999999999999999999999998865
Q ss_pred cEEEEcCCCCCCCc-CHHHHhccCCCC-------------CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000511 669 SIAYVPQVPWILSG-TIRDNILFGKNY-------------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 730 (1455)
Q Consensus 669 ~i~y~~Q~p~l~~~-ti~~nI~~g~~~-------------~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~L 730 (1455)
.++|++|+|.++.+ |++|||.++... +. ++..+.++..+++ ...+....+|
T Consensus 76 ~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~L 144 (236)
T cd03219 76 GIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLA-----------DLADRPAGEL 144 (236)
T ss_pred CEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCcc-----------chhhCChhhC
Confidence 38999999998876 999999875321 11 1233334433332 2345567799
Q ss_pred ccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEE
Q 000511 731 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKW 809 (1455)
Q Consensus 731 SGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~ 809 (1455)
|||||||++||||+..+|++++|||||++||+.+.+++.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+
T Consensus 145 SgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~ 223 (236)
T cd03219 145 SYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAEL-IRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIA 223 (236)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe
Confidence 99999999999999999999999999999999999988876 33212257899999999999865 99999999999999
Q ss_pred ecCHHHHH
Q 000511 810 IGSSADLA 817 (1455)
Q Consensus 810 ~g~~~~l~ 817 (1455)
.|+++++.
T Consensus 224 ~~~~~~~~ 231 (236)
T cd03219 224 EGTPDEVR 231 (236)
T ss_pred ecCHHHhc
Confidence 99988874
No 410
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=327.82 Aligned_cols=201 Identities=26% Similarity=0.392 Sum_probs=168.6
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|+++.|.. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 76 (241)
T PRK14250 3 EIEFKEVSYSSFG---K---EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLR 76 (241)
T ss_pred eEEEEeEEEEeCC---e---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhh
Confidence 3788999998852 2 359999999999999999999999999999999999999999998875
Q ss_pred -cEEEEcCCCCCCCcCHHHHhccCCCC---CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHH
Q 000511 669 -SIAYVPQVPWILSGTIRDNILFGKNY---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 744 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~~ti~~nI~~g~~~---~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARal 744 (1455)
.++|++|+|.+++.|++||+.++..+ +.++..+.++.++++.+. ......+||||||||++||||+
T Consensus 77 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la~al 146 (241)
T PRK14250 77 RKIGMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIARTL 146 (241)
T ss_pred hcEEEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHHHHH
Confidence 38999999999989999999876432 234556667777664322 2345668999999999999999
Q ss_pred ccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHHHh
Q 000511 745 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 745 y~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
+.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 147 ANNPEVLLLDEPTSALDPTSTEIIEEL-IVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 999999999999999999998887765 333122 37899999999999775 99999999999999999888753
No 411
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-35 Score=331.95 Aligned_cols=203 Identities=24% Similarity=0.332 Sum_probs=168.1
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEcC------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------ 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~------ 668 (1455)
..++++|++++|.. . .+|+|+||++++|++++|+||||||||||+++|+|..+ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~---~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 78 (253)
T PRK14242 5 PKMEARGLSFFYGD---F---QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDP 78 (253)
T ss_pred cEEEEeeeEEEECC---e---eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEcccc
Confidence 35899999999953 2 35999999999999999999999999999999999864 5899998765
Q ss_pred ---------cEEEEcCCCCCCCcCHHHHhccCCC---C-C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000511 669 ---------SIAYVPQVPWILSGTIRDNILFGKN---Y-D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1455)
Q Consensus 669 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~---~-~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LS 731 (1455)
.++|++|++.+++.|++||+.++.. . + +++.++.++.+++...+. +..+....+||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 151 (253)
T PRK14242 79 HVDVVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLS 151 (253)
T ss_pred ccCHHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCC
Confidence 3899999999998999999987521 1 1 234455566666643322 23456678999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEe
Q 000511 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1455)
Q Consensus 732 GGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1455)
|||||||+||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 152 gGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~ 229 (253)
T PRK14242 152 GGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEEL-IHE-LKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEV 229 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999998888775 433 3446899999999998864 999999999999999
Q ss_pred cCHHHHH
Q 000511 811 GSSADLA 817 (1455)
Q Consensus 811 g~~~~l~ 817 (1455)
|+++++.
T Consensus 230 g~~~~~~ 236 (253)
T PRK14242 230 GPTEQIF 236 (253)
T ss_pred CCHHHHH
Confidence 9988874
No 412
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.5e-34 Score=362.32 Aligned_cols=214 Identities=24% Similarity=0.369 Sum_probs=178.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCC--CCceEEECCEeCCCCChHH-Hhcc
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRD-LRGR 1295 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~--~~G~I~IdG~di~~i~~~~-lR~~ 1295 (1455)
|+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999963 4699999999999999999999999999999999999987 7999999999998877654 4678
Q ss_pred cEEEeCCCCCCCC-cHHHhcCcCCC-------CChHHHHHHHHHhcHHHHHHhCCCchhh-hcCCCCCChhHHHHHHHHH
Q 000511 1296 FAVVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGISFSVGQRQLICLAR 1366 (1455)
Q Consensus 1296 i~~VpQdp~lf~g-TIreNLdp~~~-------~~d~ei~~aL~~~~l~~~i~~lgLdt~v-~e~G~~LSgGQrQrl~LAR 1366 (1455)
++||||+|.+|+. |+++|+..... .+.++.. ....+.++.+|++... ......||||||||++|||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~ 154 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMY-----LRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAK 154 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHH-----HHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHH
Confidence 9999999988875 99999965321 1111111 1223445555665432 2334579999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHh
Q 000511 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1367 AlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
||+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++++..
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (500)
T TIGR02633 155 ALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS 229 (500)
T ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC
Confidence 9999999999999999999999999999998753 47899999999999876 8999999999999999887653
No 413
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=370.44 Aligned_cols=217 Identities=24% Similarity=0.361 Sum_probs=188.9
Q ss_pred cEEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHH---
Q 000511 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL--- 1292 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~l--- 1292 (1455)
.++++|++++|+.+ .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+.+++
T Consensus 4 ~l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 83 (648)
T PRK10535 4 LLELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQL 83 (648)
T ss_pred EEEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHH
Confidence 48999999999642 2469999999999999999999999999999999999999999999999999999887654
Q ss_pred -hcccEEEeCCCCCCCC-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000511 1293 -RGRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1455)
Q Consensus 1293 -R~~i~~VpQdp~lf~g-TIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1455)
|+.++|+||++.+|++ |+.||++... ..+.++ .+....+.++.+|++..++.....||+||+||++||||
T Consensus 84 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~-----~~~~~~~~l~~lgl~~~~~~~~~~LS~Gq~qrv~LAra 158 (648)
T PRK10535 84 RREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQ-----RLLRAQELLQRLGLEDRVEYQPSQLSGGQQQRVSIARA 158 (648)
T ss_pred HhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHH-----HHHHHHHHHHHCCChhhhcCCcccCCHHHHHHHHHHHH
Confidence 5789999999999975 9999997421 111111 11223455666688877777888999999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhhCEEEEEeCCeEEEeCChhHHh
Q 000511 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLL 1439 (1455)
Q Consensus 1368 lLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~p~eLl 1439 (1455)
++++|++|||||||++||.++.+.+.+.|++.. +++|+|+|||+++.+..|||+++|++|++++.|+++|..
T Consensus 159 L~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (648)
T PRK10535 159 LMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAQEKV 231 (648)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHHHHHhCCEEEEEECCEEEeecCccccc
Confidence 999999999999999999999999999998764 489999999999999889999999999999999999886
No 414
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-35 Score=326.15 Aligned_cols=197 Identities=21% Similarity=0.283 Sum_probs=162.7
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------c
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 669 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 669 (1455)
++++|++++|.. . .+|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (220)
T cd03265 1 IEVENLVKKYGD---F---EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRR 74 (220)
T ss_pred CEEEEEEEEECC---E---EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhc
Confidence 357888988852 2 359999999999999999999999999999999999999999998876 4
Q ss_pred EEEEcCCCCCCCc-CHHHHhccCC---CCC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 670 IAYVPQVPWILSG-TIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 670 i~y~~Q~p~l~~~-ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
++|++|++.++.. |++||+.++. ..+ +++..+.++.++++.... ....+||||||||++||
T Consensus 75 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~la 143 (220)
T cd03265 75 IGIVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAAD-----------RLVKTYSGGMRRRLEIA 143 (220)
T ss_pred EEEecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CChhhCCHHHHHHHHHH
Confidence 8999999988765 9999998642 122 234556667776654322 33458999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHH
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1455)
||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 144 RSLVHRPEVLFLDEPTIGLDPQTRAHVWEY-IEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999888775 332122 37899999999999875 999999999999998887664
No 415
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-34 Score=327.02 Aligned_cols=214 Identities=21% Similarity=0.247 Sum_probs=174.6
Q ss_pred cEEEEEEEEEecCC------------------CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEE
Q 000511 1218 LIEFQNVTMRYKPS------------------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV 1279 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~------------------~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~I 1279 (1455)
.|+++||+..|+.. ..++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~ 83 (264)
T PRK13546 4 SVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDR 83 (264)
T ss_pred eEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEE
Confidence 47788888777542 236899999999999999999999999999999999999999999999
Q ss_pred CCEeCCCCChHHHhcccEEEeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCC
Q 000511 1280 DGLNIINTPVRDLRGRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFS 1355 (1455)
Q Consensus 1280 dG~di~~i~~~~lR~~i~~VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LS 1355 (1455)
||. +++++|++.+++ .|+++|+.... ..+.++..+.. .+.++..+++..+......||
T Consensus 84 ~g~-------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~~~~LS 145 (264)
T PRK13546 84 NGE-------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMT-----PKIIEFSELGEFIYQPVKKYS 145 (264)
T ss_pred CCE-------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHcCCchhhcCCcccCC
Confidence 994 456788887664 59999986421 22333332221 122333367666777777899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1356 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1356 gGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
+|||||++||||++++|+||||||||++||+.+.+.+.+.|.+.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~~~g 225 (264)
T PRK13546 146 SGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLKDYG 225 (264)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999987753 48899999999999876 8999999999999999
Q ss_pred ChhHHhccCCcHHHHH
Q 000511 1434 NPQTLLQDECSVFSSF 1449 (1455)
Q Consensus 1434 ~p~eLl~~~~s~f~~l 1449 (1455)
++++++++....|+..
T Consensus 226 ~~~~~~~~~~~~~~~~ 241 (264)
T PRK13546 226 ELDDVLPKYEAFLNDF 241 (264)
T ss_pred CHHHHHHHhHHHHHHH
Confidence 9999988665444433
No 416
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=344.99 Aligned_cols=204 Identities=26% Similarity=0.364 Sum_probs=168.9
Q ss_pred CceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC----------
Q 000511 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1455)
Q Consensus 599 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 668 (1455)
...++++|+++.|.. . .+|+|+||++++|++++|+|||||||||||++|+|..+|++|+|.++|
T Consensus 17 ~~~l~l~~v~~~~~~---~---~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~ 90 (377)
T PRK11607 17 TPLLEIRNLTKSFDG---Q---HAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQ 90 (377)
T ss_pred CceEEEEeEEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHH
Confidence 346899999999852 1 359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCCCCCc-CHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000511 669 -SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 739 (1455)
.+|||+|++-+|.. ||+|||.|+.. .+. ++..++++..++.... .....+|||||||||+
T Consensus 91 r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRVa 159 (377)
T PRK11607 91 RPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFA-----------KRKPHQLSGGQRQRVA 159 (377)
T ss_pred CCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 48999999999965 99999998742 222 2344555666654322 3345689999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHHHh
Q 000511 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 740 lARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
|||||+.+|+++|||||||+||+...+.+.+.+..-....+.|+|+|||+.+.+. .||+|++|++|++++.|+++++..
T Consensus 160 LARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~ 239 (377)
T PRK11607 160 LARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYE 239 (377)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHh
Confidence 9999999999999999999999999888766522111224789999999999865 599999999999999999999865
Q ss_pred c
Q 000511 819 S 819 (1455)
Q Consensus 819 ~ 819 (1455)
.
T Consensus 240 ~ 240 (377)
T PRK11607 240 H 240 (377)
T ss_pred C
Confidence 3
No 417
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.3e-35 Score=326.08 Aligned_cols=190 Identities=25% Similarity=0.402 Sum_probs=157.0
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|+++.|+.. . +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (216)
T TIGR00960 2 IRFEQVSKAYPGG-H---QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPF 77 (216)
T ss_pred eEEEEEEEEecCC-C---eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHH
Confidence 5789999998532 1 2359999999999999999999999999999999999999999998875
Q ss_pred ---cEEEEcCCCCCCC-cCHHHHhccCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 ---SIAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
.++|++|+|.++. .|++||+.++.. .+ +++..++++.+++..... ....+||||||||
T Consensus 78 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qr 146 (216)
T TIGR00960 78 LRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAH-----------ALPMQLSGGEQQR 146 (216)
T ss_pred HHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHH
Confidence 3899999999876 599999987521 12 234566677776654332 2345899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeE
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 807 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i 807 (1455)
++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++
T Consensus 147 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 147 VAIARAIVHKPPLLLADEPTGNLDPELSRDIMRL-FEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999988876 33312347899999999999875 999999999974
No 418
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.9e-35 Score=321.89 Aligned_cols=188 Identities=27% Similarity=0.419 Sum_probs=157.1
Q ss_pred EEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC----------cEEEE
Q 000511 604 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------SIAYV 673 (1455)
Q Consensus 604 ~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------~i~y~ 673 (1455)
++|+++.|+.. .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 2 ~~~l~~~~~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~ 76 (205)
T cd03226 2 IENISFSYKKG-----TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYV 76 (205)
T ss_pred cccEEEEeCCc-----CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEE
Confidence 56778887531 2359999999999999999999999999999999999999999999876 48999
Q ss_pred cCCC--CCCCcCHHHHhccCCC---CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCC
Q 000511 674 PQVP--WILSGTIRDNILFGKN---YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 748 (1455)
Q Consensus 674 ~Q~p--~l~~~ti~~nI~~g~~---~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~ 748 (1455)
+|+| .+++.|++||+.++.. .++++..++++.+++..... ....+||||||||++||||+..+|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKE-----------RHPLSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcC-----------CCchhCCHHHHHHHHHHHHHHhCC
Confidence 9998 4677899999987642 23346677888887764433 233589999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEE
Q 000511 749 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 808 (1455)
Q Consensus 749 ~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~ 808 (1455)
+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGEL-IRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999998888775 43312357899999999999875 9999999999874
No 419
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-35 Score=325.03 Aligned_cols=197 Identities=29% Similarity=0.372 Sum_probs=161.1
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--------cEEEEc
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAYVP 674 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~y~~ 674 (1455)
+++|+++.|+.... .+++|+|+||+|++|++++|+||||||||||+++|+|..+|++|+|.++| .++|++
T Consensus 2 ~~~~l~~~~~~~~~--~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~ 79 (220)
T cd03293 2 EVRNVSKTYGGGGG--AVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVF 79 (220)
T ss_pred eEEEEEEEcCCCCc--ceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEe
Confidence 57889998863211 12469999999999999999999999999999999999999999999876 589999
Q ss_pred CCCCCCC-cCHHHHhccCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHcc
Q 000511 675 QVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 746 (1455)
Q Consensus 675 Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 746 (1455)
|+|.++. .|++||+.++.. .+ +++..+.++.++++..+. ....+||||||||++||||++.
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 80 QQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFEN-----------AYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred cccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHHHHHHHHHHHHHc
Confidence 9999887 699999986532 12 234556666666654333 3345899999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccc-cCCEEEEEe--CCeEEEecCH
Q 000511 747 GSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMD--KGQVKWIGSS 813 (1455)
Q Consensus 747 ~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~--~G~i~~~g~~ 813 (1455)
+|+++||||||++||+.+.+.+++. +.... ..++|+|++||+++.+. .||++++|+ +|++++.++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEE-LLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999988876 33211 23789999999999875 599999999 7999987764
No 420
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-35 Score=293.62 Aligned_cols=221 Identities=24% Similarity=0.394 Sum_probs=186.3
Q ss_pred ccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCC---------
Q 000511 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT--------- 1287 (1455)
Q Consensus 1217 g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i--------- 1287 (1455)
..++++|+..+|.+. .|||+||++.++|+.|.|+|-|||||||+++++.=+-.|+.|+|.++|..|...
T Consensus 5 ~~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ 82 (256)
T COG4598 5 NALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKP 82 (256)
T ss_pred cceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeee
Confidence 368999999999765 599999999999999999999999999999999999999999999999887532
Q ss_pred ----ChHHHhcccEEEeCCCCCCCC-cHHHhcC--cCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChh
Q 000511 1288 ----PVRDLRGRFAVVPQSPFLFEG-SLRDNLD--PFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVG 1357 (1455)
Q Consensus 1288 ----~~~~lR~~i~~VpQdp~lf~g-TIreNLd--p~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgG 1357 (1455)
.++.+|+++++|.|.--|.+- |+-||.- |-. ...++.+.+|. .++...|++..-..-...||||
T Consensus 83 ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae------~~L~kVGi~ek~~~YP~~LSGG 156 (256)
T COG4598 83 ADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAE------KYLAKVGIAEKADAYPAHLSGG 156 (256)
T ss_pred CCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHH------HHHHHhCchhhhhcCccccCch
Confidence 256789999999999888875 9999973 322 22233332221 1233335555555566789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCCh
Q 000511 1358 QRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1435 (1455)
Q Consensus 1358 QrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p 1435 (1455)
|+||.+|||||.-+|+++++|||||+||++---.+.++|++.. .++|.++|||.+...++ +..|+.+.+|+|-|+|+|
T Consensus 157 QQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P 236 (256)
T COG4598 157 QQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPP 236 (256)
T ss_pred HHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCCh
Confidence 9999999999999999999999999999999988888888765 59999999999999998 699999999999999999
Q ss_pred hHHhccCCcH
Q 000511 1436 QTLLQDECSV 1445 (1455)
Q Consensus 1436 ~eLl~~~~s~ 1445 (1455)
+++..+|.|.
T Consensus 237 ~qvf~nP~S~ 246 (256)
T COG4598 237 EQVFGNPQSP 246 (256)
T ss_pred HHHhcCCCCH
Confidence 9999998763
No 421
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=329.94 Aligned_cols=204 Identities=26% Similarity=0.333 Sum_probs=167.8
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEcC------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------ 668 (1455)
..++++|+++.|.. . .+|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 79 (254)
T PRK14273 6 AIIETENLNLFYTD---F---KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSN 79 (254)
T ss_pred ceEEEeeeEEEeCC---c---eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccc
Confidence 46899999999853 2 259999999999999999999999999999999999987 489998754
Q ss_pred ---------cEEEEcCCCCCCCcCHHHHhccCCC----CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000511 669 ---------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1455)
Q Consensus 669 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LS 731 (1455)
.++|++|+|.+++.|++|||.++.. .+. ++..++++.+++...+. + ....+..+||
T Consensus 80 ~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~----~~~~~~~~LS 152 (254)
T PRK14273 80 NFDILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK---D----KLNTNALSLS 152 (254)
T ss_pred cccHHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH---H----HHhCCcccCC
Confidence 3899999999998999999987642 122 23344555555532221 1 2344677999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEe
Q 000511 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1455)
Q Consensus 732 GGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1455)
|||||||+||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 153 gG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~ 230 (254)
T PRK14273 153 GGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEEL-IIN-LKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEE 230 (254)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999988875 433 3456899999999999765 999999999999999
Q ss_pred cCHHHHHh
Q 000511 811 GSSADLAV 818 (1455)
Q Consensus 811 g~~~~l~~ 818 (1455)
|+++++..
T Consensus 231 g~~~~~~~ 238 (254)
T PRK14273 231 SSTDELFF 238 (254)
T ss_pred CCHHHHHh
Confidence 99988753
No 422
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=332.75 Aligned_cols=202 Identities=26% Similarity=0.394 Sum_probs=170.3
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|+++.|... + .++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~-~---~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13635 5 IIRVEHISFRYPDA-A---TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVR 80 (279)
T ss_pred eEEEEEEEEEeCCC-C---ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHh
Confidence 58899999999532 1 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCC--CCCCcCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000511 669 -SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1455)
Q Consensus 669 -~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 738 (1455)
.|+|++|+| .+++.||+|||.++.. .++ ++..++++.++|+..+... ...||||||||+
T Consensus 81 ~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qrv 149 (279)
T PRK13635 81 RQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNRE-----------PHRLSGGQKQRV 149 (279)
T ss_pred hheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHH
Confidence 489999998 4667899999987632 222 3456677777776554433 348999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHH
Q 000511 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 817 (1455)
Q Consensus 739 alARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 817 (1455)
+||||++.+|+++||||||++||+.+.+.+++. +..... .+.|+|++||+++.+..||+|++|++|++++.|+.+++.
T Consensus 150 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 150 AIAGVLALQPDIIILDEATSMLDPRGRREVLET-VRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999988876 333122 378999999999998889999999999999999988875
Q ss_pred h
Q 000511 818 V 818 (1455)
Q Consensus 818 ~ 818 (1455)
.
T Consensus 229 ~ 229 (279)
T PRK13635 229 K 229 (279)
T ss_pred c
Confidence 4
No 423
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.2e-34 Score=329.82 Aligned_cols=202 Identities=27% Similarity=0.375 Sum_probs=166.8
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC-----CcEEEEcC--------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT-----HGSIHASG-------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~-----~G~i~~~~-------- 668 (1455)
++++|++++|.. . .+++|+||++++||+++|+|+||||||||+++|+|.++|+ +|+|.++|
T Consensus 2 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~ 75 (247)
T TIGR00972 2 IEIENLNLFYGE---K---EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKI 75 (247)
T ss_pred EEEEEEEEEECC---e---eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEcccccc
Confidence 678999999853 1 2599999999999999999999999999999999999998 99998754
Q ss_pred -------cEEEEcCCCCCCCcCHHHHhccCCC----CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000511 669 -------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1455)
Q Consensus 669 -------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGG 733 (1455)
.++|++|++++++.|++||+.++.. .+. ++..++++..++..+++ ........+||||
T Consensus 76 ~~~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG 148 (247)
T TIGR00972 76 DVVELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGG 148 (247)
T ss_pred chHHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHH
Confidence 3899999999998999999987532 121 23445555556653221 1234566799999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEecC
Q 000511 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 812 (1455)
Q Consensus 734 QkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~ 812 (1455)
||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 149 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (247)
T TIGR00972 149 QQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEEL-IQE-LKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGP 226 (247)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999888775 433 334589999999999876 499999999999999999
Q ss_pred HHHHHh
Q 000511 813 SADLAV 818 (1455)
Q Consensus 813 ~~~l~~ 818 (1455)
++++..
T Consensus 227 ~~~~~~ 232 (247)
T TIGR00972 227 TEQIFT 232 (247)
T ss_pred HHHHHh
Confidence 888753
No 424
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.3e-34 Score=328.96 Aligned_cols=198 Identities=25% Similarity=0.382 Sum_probs=162.7
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|+++.|..+ .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (243)
T TIGR02315 2 LEVENLSKVYPNG-----KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRK 76 (243)
T ss_pred eEEEeeeeecCCC-----cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHH
Confidence 5688999988511 2359999999999999999999999999999999999999999998865
Q ss_pred ---cEEEEcCCCCCCC-cCHHHHhccCCC------------CC---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000511 669 ---SIAYVPQVPWILS-GTIRDNILFGKN------------YD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 729 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~------------~~---~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~ 729 (1455)
.++|++|++.++. .|++||+.++.. .. .++..++++.+++... ......+
T Consensus 77 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~ 145 (243)
T TIGR02315 77 LRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADK-----------AYQRADQ 145 (243)
T ss_pred HHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhh-----------hcCCccc
Confidence 2899999998876 599999987531 01 1234445555555432 2345678
Q ss_pred cccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccc-cCCEEEEEeCCeE
Q 000511 730 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQV 807 (1455)
Q Consensus 730 LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i 807 (1455)
||||||||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||++++|++|++
T Consensus 146 LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i 224 (243)
T TIGR02315 146 LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDY-LKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEI 224 (243)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 999999999999999999999999999999999998888775 333122 3789999999999985 5999999999999
Q ss_pred EEecCHHHH
Q 000511 808 KWIGSSADL 816 (1455)
Q Consensus 808 ~~~g~~~~l 816 (1455)
++.|+++++
T Consensus 225 ~~~~~~~~~ 233 (243)
T TIGR02315 225 VFDGAPSEL 233 (243)
T ss_pred EecCCHHHh
Confidence 999988775
No 425
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.8e-34 Score=317.67 Aligned_cols=194 Identities=22% Similarity=0.312 Sum_probs=162.9
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .. .|++++
T Consensus 2 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~~-~~~~~~ 76 (207)
T PRK13539 2 MLEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--PD-VAEACH 76 (207)
T ss_pred EEEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--hh-hHhhcE
Confidence 3789999999964 369999999999999999999999999999999999999999999999998753 22 788999
Q ss_pred EEeCCCCCC-CCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000511 1298 VVPQSPFLF-EGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1298 ~VpQdp~lf-~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
+++|++.++ ..|+++|+..... ..++++.++++..++. .........||||||||++||||++++|+
T Consensus 77 ~~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~---------~~~~~~~~~LS~G~~qrl~la~al~~~p~ 147 (207)
T PRK13539 77 YLGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLA---------PLAHLPFGYLSAGQKRRVALARLLVSNRP 147 (207)
T ss_pred EecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCH---------HHHcCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999988765 5799999864321 2233455555555543 32333345799999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhHhhhCEEEEEeC
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILILDH 1426 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~-~~~~TvI~IaHrl~ti~~~DrI~vl~~ 1426 (1455)
+|||||||++||..+.+.+.+.|++. .+++|+|++||+++.+.. |+++.++.
T Consensus 148 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 148 IWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 99999999999999999999999875 358999999999999998 99988854
No 426
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=342.57 Aligned_cols=204 Identities=28% Similarity=0.365 Sum_probs=167.0
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|++++|+.... ..++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~~--~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 79 (343)
T PRK11153 2 IELKNISKVFPQGGR--TIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRK 79 (343)
T ss_pred EEEEeEEEEeCCCCC--ceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHH
Confidence 578999999963211 12469999999999999999999999999999999999999999998865
Q ss_pred ---cEEEEcCCCCCCC-cCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
.|+|++|++.++. .|++|||.++.. .+. ++..+.++..++... ......+||||||||
T Consensus 80 ~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qR 148 (343)
T PRK11153 80 ARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDK-----------ADRYPAQLSGGQKQR 148 (343)
T ss_pred HhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 4999999999886 699999987532 222 233445555555322 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 815 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~-~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 815 (1455)
|+||||++.+|+++||||||++||+.+.+.+.+. +... ...++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 149 v~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~ 227 (343)
T PRK11153 149 VAIARALASNPKVLLCDEATSALDPATTRSILEL-LKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSE 227 (343)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999988876 3321 1237899999999999875 99999999999999999998
Q ss_pred HHhc
Q 000511 816 LAVS 819 (1455)
Q Consensus 816 l~~~ 819 (1455)
+...
T Consensus 228 ~~~~ 231 (343)
T PRK11153 228 VFSH 231 (343)
T ss_pred HHhC
Confidence 8643
No 427
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=332.47 Aligned_cols=200 Identities=27% Similarity=0.413 Sum_probs=166.6
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|++++|+.. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (274)
T PRK13644 2 IRLENVSYSYPDG-----TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIR 76 (274)
T ss_pred EEEEEEEEEcCCC-----CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHH
Confidence 5789999998531 2359999999999999999999999999999999999999999998865
Q ss_pred -cEEEEcCCCC--CCCcCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000511 669 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1455)
Q Consensus 669 -~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 738 (1455)
.++|++|+|. +++.|++|||.++.. .+. ++..++++.++++... ......||||||||+
T Consensus 77 ~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv 145 (274)
T PRK13644 77 KLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYR-----------HRSPKTLSGGQGQCV 145 (274)
T ss_pred hheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHh-----------cCCcccCCHHHHHHH
Confidence 3899999986 567899999987632 222 3345556666664332 344568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHh
Q 000511 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 739 alARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
+||||++.+|+++||||||++||+.+.+.+.+. +.....+|.|+|++||+++.++.||+|++|++|++++.|+.+++..
T Consensus 146 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 146 ALAGILTMEPECLIFDEVTSMLDPDSGIAVLER-IKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999998888776 3321234789999999999998899999999999999999888753
No 428
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=333.71 Aligned_cols=186 Identities=30% Similarity=0.425 Sum_probs=156.4
Q ss_pred ccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------------cEEEEcCCCCCCC-c
Q 000511 621 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILS-G 682 (1455)
Q Consensus 621 ~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------------~i~y~~Q~p~l~~-~ 682 (1455)
.+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|+|.++. .
T Consensus 38 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 117 (269)
T cd03294 38 VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHR 117 (269)
T ss_pred eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCC
Confidence 359999999999999999999999999999999999999999998854 4899999999885 5
Q ss_pred CHHHHhccCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcC
Q 000511 683 TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 755 (1455)
Q Consensus 683 ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDe 755 (1455)
|++||+.++.. ++ +++..++++.+++...+.. ...+||||||||++||||++.+|+++||||
T Consensus 118 tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrv~lAral~~~p~illLDE 186 (269)
T cd03294 118 TVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHK-----------YPDELSGGMQQRVGLARALAVDPDILLMDE 186 (269)
T ss_pred cHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------CcccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999987421 22 2345566777777544433 335899999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHHHh
Q 000511 756 VLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 756 p~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
||++||+.+.+.+.+. +.... ..|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 187 Pt~~LD~~~~~~l~~~-l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 187 AFSALDPLIRREMQDE-LLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred CCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999988876 33211 23789999999999875 499999999999999999988754
No 429
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.8e-34 Score=336.85 Aligned_cols=202 Identities=25% Similarity=0.374 Sum_probs=167.5
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|+++.|.. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~i~i~~l~k~~~~------~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~ 79 (306)
T PRK13537 6 APIDFRNVEKRYGD------KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHAR 79 (306)
T ss_pred ceEEEEeEEEEECC------eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHH
Confidence 46899999999852 2359999999999999999999999999999999999999999999875
Q ss_pred -cEEEEcCCCCCCC-cCHHHHhcc-CCC--CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000511 669 -SIAYVPQVPWILS-GTIRDNILF-GKN--YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~-~ti~~nI~~-g~~--~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 739 (1455)
.||||||+|.++. .|++||+.| +.. .+. ++..++++.+++.... .....+||||||||++
T Consensus 80 ~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 148 (306)
T PRK13537 80 QRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKA-----------DAKVGELSGGMKRRLT 148 (306)
T ss_pred hcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHh-----------cCchhhCCHHHHHHHH
Confidence 4999999999875 599999985 321 122 2334455555553221 2234589999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHHHh
Q 000511 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 740 lARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
||||+.++|++++|||||++||+...+++.+. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 149 LARALVNDPDVLVLDEPTTGLDPQARHLMWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999988876 43322347899999999999875 99999999999999999999865
Q ss_pred c
Q 000511 819 S 819 (1455)
Q Consensus 819 ~ 819 (1455)
.
T Consensus 228 ~ 228 (306)
T PRK13537 228 S 228 (306)
T ss_pred c
Confidence 4
No 430
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=4.1e-34 Score=363.80 Aligned_cols=199 Identities=26% Similarity=0.339 Sum_probs=167.7
Q ss_pred CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCC--CceEEECCEeCCCCChHHHhcccEEEeCCCCCCCC-c
Q 000511 1233 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC--GGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEG-S 1309 (1455)
Q Consensus 1233 ~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~--~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~lf~g-T 1309 (1455)
+.+|+|+|++++|||++||+||||||||||+++|.|+.+|. +|+|.+||.++. ...+++++||||++.+|+. |
T Consensus 81 ~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~----~~~~~~i~yv~Q~~~l~~~lT 156 (659)
T PLN03211 81 RTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPT----KQILKRTGFVTQDDILYPHLT 156 (659)
T ss_pred CeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECc----hhhccceEEECcccccCCcCC
Confidence 46999999999999999999999999999999999999885 899999999874 2456789999999999965 9
Q ss_pred HHHhcCcCC------CCChHHHHHHHHHhcHHHHHHhCCC----chhhhc-CCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000511 1310 LRDNLDPFH------MNDDLKIWSVLEKCHVKEEVEAVGL----ETFVKE-SGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1455)
Q Consensus 1310 IreNLdp~~------~~~d~ei~~aL~~~~l~~~i~~lgL----dt~v~e-~G~~LSgGQrQrl~LARAlLr~~~ILlLD 1378 (1455)
+|||+.+.. ..++++..+. ..+.++.+|| ||.+++ ....||||||||++|||||+++|+||+||
T Consensus 157 V~E~l~~~a~~~~~~~~~~~~~~~~-----v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLD 231 (659)
T PLN03211 157 VRETLVFCSLLRLPKSLTKQEKILV-----AESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILD 231 (659)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHH-----HHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEe
Confidence 999996531 1233332211 2344555555 666664 35679999999999999999999999999
Q ss_pred ccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-H-hhhCEEEEEeCCeEEEeCChhHHhc
Q 000511 1379 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1379 EaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~t-i-~~~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
|||++||..+...+.+.|++.. +++|||+++|+++. + ..||+|++|++|++++.|+++++.+
T Consensus 232 EPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~ 296 (659)
T PLN03211 232 EPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMA 296 (659)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHH
Confidence 9999999999999999998765 58999999999984 4 5589999999999999999999874
No 431
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.9e-34 Score=319.77 Aligned_cols=192 Identities=24% Similarity=0.330 Sum_probs=161.2
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------cE
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 670 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 670 (1455)
++++|+++.|+. . ++|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~~---~---~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i 74 (208)
T cd03268 1 LKTNDLTKTYGK---K---RVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRI 74 (208)
T ss_pred CEEEEEEEEECC---e---EeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhE
Confidence 357899998842 2 359999999999999999999999999999999999999999999876 48
Q ss_pred EEEcCCCCCC-CcCHHHHhccCC---CCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHcc
Q 000511 671 AYVPQVPWIL-SGTIRDNILFGK---NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 746 (1455)
Q Consensus 671 ~y~~Q~p~l~-~~ti~~nI~~g~---~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 746 (1455)
+||+|++.++ +.|++||+.++. ..++++.+++++..+++... ......|||||||||+||||++.
T Consensus 75 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al~~ 143 (208)
T cd03268 75 GALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSA-----------KKKVKGFSLGMKQRLGIALALLG 143 (208)
T ss_pred EEecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHH-----------hhhHhhCCHHHHHHHHHHHHHhc
Confidence 9999999877 469999997652 23455667777777775433 23456899999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEec
Q 000511 747 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 747 ~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1455)
+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 144 ~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 144 NPDLLILDEPTNGLDPDGIKELREL-ILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999888775 33312257899999999999865 9999999999998654
No 432
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=2.2e-34 Score=322.95 Aligned_cols=201 Identities=22% Similarity=0.318 Sum_probs=163.0
Q ss_pred EEEEEEEEEecCC-----CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEEC--C--EeCCCCCh
Q 000511 1219 IEFQNVTMRYKPS-----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD--G--LNIINTPV 1289 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~-----~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~Id--G--~di~~i~~ 1289 (1455)
|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+| | +++...+.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 7899999999631 2469999999999999999999999999999999999999999999998 4 37766665
Q ss_pred HH---H-hcccEEEeCCCCCCCC-cHHHhcCcC---CCCChHHHHHHHHHhcHHHHHHhCCCchh-hhcCCCCCChhHHH
Q 000511 1290 RD---L-RGRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQ 1360 (1455)
Q Consensus 1290 ~~---l-R~~i~~VpQdp~lf~g-TIreNLdp~---~~~~d~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQ 1360 (1455)
.. + +++++|+||+|.+|+. |++||+... .....++.. ....+.++.+|++.. ....+.+||+||||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LS~G~~q 156 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAAR-----ARARELLARLNIPERLWHLPPATFSGGEQQ 156 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCCchhhhhCCcccCCHHHHH
Confidence 43 3 4679999999988875 999998642 111111111 112344455566543 34556789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hhCEEEEE
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILIL 1424 (1455)
Q Consensus 1361 rl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl 1424 (1455)
|++||||++++|++|||||||++||.++.+.+.+.|++.. +++|+|+|||+++.+. .||||+.+
T Consensus 157 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 157 RVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 9999999999999999999999999999999999998764 4789999999999886 58999876
No 433
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.6e-34 Score=323.17 Aligned_cols=198 Identities=26% Similarity=0.440 Sum_probs=163.9
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------c
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 669 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 669 (1455)
++++|+++.|+.. . +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 1 l~~~~l~~~~~~~-~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (220)
T cd03263 1 LQIRNLTKTYKKG-T---KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQS 76 (220)
T ss_pred CEEEeeEEEeCCC-C---ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhh
Confidence 3578899988532 1 2359999999999999999999999999999999999999999998875 3
Q ss_pred EEEEcCCCCCC-CcCHHHHhccCC---CCC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 670 IAYVPQVPWIL-SGTIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 670 i~y~~Q~p~l~-~~ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
++|++|+|.++ +.|++||+.+.. ..+ +++..++++.+++.... .....+||||||||++||
T Consensus 77 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la 145 (220)
T cd03263 77 LGYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-----------NKRARTLSGGMKRKLSLA 145 (220)
T ss_pred EEEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hChhhhCCHHHHHHHHHH
Confidence 89999999888 569999998642 122 23455666666664322 234468999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHH
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1455)
||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 146 ~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 146 IALIGGPSVLLLDEPTSGLDPASRRAIWDL-ILE-VRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHHhcCCCEEEECCCCCCCCHHHHHHHHHH-HHH-HhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 999999999999999999999999988775 333 3346899999999999865 999999999999999988764
No 434
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-34 Score=327.62 Aligned_cols=197 Identities=26% Similarity=0.379 Sum_probs=161.6
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--------------
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 668 (1455)
+++|+++.|..+ .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (241)
T cd03256 2 EVENLSKTYPNG-----KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQL 76 (241)
T ss_pred EEeeEEEecCCc-----cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHH
Confidence 578889888531 2359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCC-cCHHHHhccCCC------------CC---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000511 669 --SIAYVPQVPWILS-GTIRDNILFGKN------------YD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 730 (1455)
Q Consensus 669 --~i~y~~Q~p~l~~-~ti~~nI~~g~~------------~~---~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~L 730 (1455)
.++|++|++.++. .|++||+.++.. .+ .++..+.++..++.. .....+.+|
T Consensus 77 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~L 145 (241)
T cd03256 77 RRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQL 145 (241)
T ss_pred HhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccC
Confidence 3899999998876 699999986521 11 122334444444432 234566799
Q ss_pred ccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccc-cCCEEEEEeCCeEE
Q 000511 731 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVK 808 (1455)
Q Consensus 731 SGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~ 808 (1455)
||||||||+||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||++++|++|+++
T Consensus 146 S~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~ 224 (241)
T cd03256 146 SGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDL-LKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIV 224 (241)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999988876 333122 3789999999999988 59999999999999
Q ss_pred EecCHHHH
Q 000511 809 WIGSSADL 816 (1455)
Q Consensus 809 ~~g~~~~l 816 (1455)
+.|+++++
T Consensus 225 ~~~~~~~~ 232 (241)
T cd03256 225 FDGPPAEL 232 (241)
T ss_pred eecCHHHh
Confidence 99998876
No 435
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=328.99 Aligned_cols=205 Identities=25% Similarity=0.333 Sum_probs=169.8
Q ss_pred CceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEcC-----
Q 000511 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG----- 668 (1455)
Q Consensus 599 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~----- 668 (1455)
...++++|+++.|.. . ++|+|+||+|++|++++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 11 ~~~l~~~~l~~~~~~---~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~ 84 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---F---HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILT 84 (260)
T ss_pred CceEEEEEEEEEeCC---e---EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccc
Confidence 456899999999853 2 35999999999999999999999999999999999986 5899998764
Q ss_pred ----------cEEEEcCCCCCCCcCHHHHhccCCC----CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000511 669 ----------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 730 (1455)
Q Consensus 669 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~L 730 (1455)
.++|++|+|.++..|++||+.++.. +++ ++..++++..++..++. ...++...+|
T Consensus 85 ~~~~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~L 157 (260)
T PRK10744 85 PKQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSL 157 (260)
T ss_pred cccchHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCC
Confidence 4899999999988999999987532 232 23445566666543332 2345677899
Q ss_pred ccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEE
Q 000511 731 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKW 809 (1455)
Q Consensus 731 SGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~ 809 (1455)
|||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||++++|++|++++
T Consensus 158 S~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 235 (260)
T PRK10744 158 SGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEEL-ITE-LKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIE 235 (260)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999888776 333 334689999999999886 499999999999999
Q ss_pred ecCHHHHHh
Q 000511 810 IGSSADLAV 818 (1455)
Q Consensus 810 ~g~~~~l~~ 818 (1455)
.|+.+++..
T Consensus 236 ~g~~~~~~~ 244 (260)
T PRK10744 236 FGNTDTIFT 244 (260)
T ss_pred eCCHHHHHh
Confidence 999888753
No 436
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.3e-34 Score=323.53 Aligned_cols=191 Identities=26% Similarity=0.369 Sum_probs=156.1
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--------------
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 668 (1455)
+++|++++|+.... .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~~~--~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (218)
T cd03255 2 ELKNLSKTYGGGGE--KVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAF 79 (218)
T ss_pred eEeeeEEEecCCCc--ceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHH
Confidence 57889998863210 12369999999999999999999999999999999999999999998754
Q ss_pred ---cEEEEcCCCCCCCc-CHHHHhccCCCC---C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 ---SIAYVPQVPWILSG-TIRDNILFGKNY---D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~---~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
.++|++|+|.++.. |++||+.++..+ + +++..++++..+++.. ......+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 148 (218)
T cd03255 80 RRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDR-----------LNHYPSELSGGQQQR 148 (218)
T ss_pred HhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhcChhhcCHHHHHH
Confidence 38999999998876 999999875421 1 2344556666655432 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccccCCEEEEEeCCeE
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQV 807 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i 807 (1455)
|+||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+..||++++|++|++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 149 VAIARALANDPKIILADEPTGNLDSETGKEVMEL-LRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 9999999999999999999999999998888776 333122 37899999999998888999999999974
No 437
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.8e-34 Score=317.15 Aligned_cols=192 Identities=20% Similarity=0.273 Sum_probs=159.9
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGE--RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 578999999964 46999999999999999999999999999999999999999999999999998765 456789999
Q ss_pred EeCCCCCCC-CcHHHhcCcCCC-C--ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000511 1299 VPQSPFLFE-GSLRDNLDPFHM-N--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1455)
Q Consensus 1299 VpQdp~lf~-gTIreNLdp~~~-~--~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~I 1374 (1455)
+||++.+|+ .|+++|+..... . .++++.++++..++. ........+||+|||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~---------~~~~~~~~~LS~G~~qrv~la~al~~~p~l 148 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLT---------GFEDLPAAQLSAGQQRRLALARLWLSRAPL 148 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCCH---------HHhcCChhhcCHHHHHHHHHHHHHhcCCCE
Confidence 999998886 699999864321 1 122345555555443 333444557999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhHhhhCEEEE
Q 000511 1375 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILI 1423 (1455)
Q Consensus 1375 LlLDEaTS~lD~~te~~I~~~i~~~-~~~~TvI~IaHrl~ti~~~DrI~v 1423 (1455)
++|||||++||..+.+.+.+.|++. .++.|+|++||+...+. ||+++.
T Consensus 149 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~-~~~~~~ 197 (198)
T TIGR01189 149 WILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGLV-EARELR 197 (198)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccccc-ceEEee
Confidence 9999999999999999999999875 35789999999986543 477654
No 438
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=5.8e-32 Score=315.36 Aligned_cols=335 Identities=21% Similarity=0.297 Sum_probs=243.7
Q ss_pred HhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhhcCCCCCCcch
Q 000511 1079 ETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA----VIGSRGNLPATFST 1154 (1455)
Q Consensus 1079 Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~ 1154 (1455)
+...+.+.|--|+.+.......+...+..-.......+...|+.+..+.+.-+ ..++...+ ++..+ .....+
T Consensus 270 rlr~NaE~iAFY~g~~~E~~~~~~~f~~Lv~~l~~l~~~r~~l~f~~n~~~Yl-g~ilsy~vi~~p~Fs~h---~y~~~s 345 (659)
T KOG0060|consen 270 RLRVNAEEIAFYRGGQVEHQRTDQRFRNLVQHLRELMSFRFWLGFIDNIFDYL-GGILSYVVIAIPFFSGH---VYDDLS 345 (659)
T ss_pred eeeecchhhhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhheeeEEeeeeeccc---ccCCcC
Confidence 44556777888887776666555555555555555566777887766655421 11111111 11111 122334
Q ss_pred HHHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc-------------cccc----c---CCCCC
Q 000511 1155 PGLV-GLA---LSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQ-------------EELC----G---YQSLS 1210 (1455)
Q Consensus 1155 ~g~v-gl~---l~~~~~~~~~l~~l~~~~~~~e~~~~s~~Ri~~~~~~~~-------------e~~~----~---~~~~~ 1210 (1455)
+... +.. ..+.+.+.+.+..++....++..-.+-..||-++.+.-. |+.. . ...-+
T Consensus 346 ~aEL~~~i~~na~~~i~Li~~f~~l~~~~~~ls~lsGyt~Ri~el~~~l~d~~~~~~~~~~~~~~~~E~~~~l~~~~G~~ 425 (659)
T KOG0060|consen 346 PAELSGLISNNAFVFIYLISAFGRLVDLSRDLSRLSGYTHRIGELMEVLDDLSSGSQECTMEEEELGEAEWGLSLPPGSG 425 (659)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHHhccCCcchhhhhhhhhhhhhccCCCCCCc
Confidence 4333 222 122333444555556566666666667788887764210 1100 0 01113
Q ss_pred CCCCCCccEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH
Q 000511 1211 PDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1290 (1455)
Q Consensus 1211 ~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~ 1290 (1455)
..||.+..|+|++|++.=|.+.+...+|+||+|+.|+.+-|+||||||||||++.|.|+.+..+|++.--...-
T Consensus 426 ~~~~~Dn~i~~e~v~l~tPt~g~~lie~Ls~~V~~g~~LLItG~sG~GKtSLlRvlggLWp~~~G~l~k~~~~~------ 499 (659)
T KOG0060|consen 426 KAEPADNAIEFEEVSLSTPTNGDLLIENLSLEVPSGQNLLITGPSGCGKTSLLRVLGGLWPSTGGKLTKPTDGG------ 499 (659)
T ss_pred ccccccceEEeeeeeecCCCCCceeeeeeeeEecCCCeEEEECCCCCchhHHHHHHhcccccCCCeEEecccCC------
Confidence 45788889999999999876666667789999999999999999999999999999999999999997532110
Q ss_pred HHhcccEEEeCCCCCCCCcHHHhcC-cC-------CCCChHHHHHHHHHhcHHHHHHhC-CCchhhh-cCCCCCChhHHH
Q 000511 1291 DLRGRFAVVPQSPFLFEGSLRDNLD-PF-------HMNDDLKIWSVLEKCHVKEEVEAV-GLETFVK-ESGISFSVGQRQ 1360 (1455)
Q Consensus 1291 ~lR~~i~~VpQdp~lf~gTIreNLd-p~-------~~~~d~ei~~aL~~~~l~~~i~~l-gLdt~v~-e~G~~LSgGQrQ 1360 (1455)
-+.+=++||.|++-.||+||-+- |. +..+|++|.+.|+.++|...++.. |+|+++. +=...||+||+|
T Consensus 500 --~~~lfflPQrPYmt~GTLRdQvIYP~~~~~~~~~~~~d~~i~r~Le~v~L~hl~~r~ggld~~~~~dW~dvLS~GEqQ 577 (659)
T KOG0060|consen 500 --PKDLFFLPQRPYMTLGTLRDQVIYPLKAEDMDSKSASDEDILRILENVQLGHLLEREGGLDQQVDWDWMDVLSPGEQQ 577 (659)
T ss_pred --CCceEEecCCCCccccchhheeeccCccccccccCCCHHHHHHHHHHhhhhhHHHHhCCCCchhhccHHhhcCHHHHH
Confidence 04589999999999999999973 41 235799999999999999999888 9997665 334579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhCEEEEEeCC
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHG 1427 (1455)
Q Consensus 1361 rl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G 1427 (1455)
|+|+||.++.+|++-+|||+|||||.+.|..+.+.+|+. +-|.|.|.||-+.-+.-|.++-|+.+
T Consensus 578 RLa~ARLfy~kPk~AiLDE~TSAv~~dvE~~~Yr~~r~~--giT~iSVgHRkSL~kfHd~~L~~~g~ 642 (659)
T KOG0060|consen 578 RLAFARLFYHKPKFAILDECTSAVTEDVEGALYRKCREM--GITFISVGHRKSLWKFHDYVLRMDGR 642 (659)
T ss_pred HHHHHHHHhcCCceEEeechhhhccHHHHHHHHHHHHHc--CCeEEEeccHHHHHhhhhEEEEecCC
Confidence 999999999999999999999999999999999999986 89999999999988888999999863
No 439
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=324.53 Aligned_cols=198 Identities=25% Similarity=0.341 Sum_probs=162.4
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|+++.|+.... ..++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~--~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 82 (233)
T PRK11629 5 LLQCDNLCKRYQEGSV--QTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKA 82 (233)
T ss_pred eEEEEeEEEEcCCCCc--ceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHH
Confidence 4789999999964211 12369999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCCCCCCc-CHHHHhccCC---CCCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000511 669 -----SIAYVPQVPWILSG-TIRDNILFGK---NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1455)
Q Consensus 669 -----~i~y~~Q~p~l~~~-ti~~nI~~g~---~~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQk 735 (1455)
.++|++|+|.++.. |++||+.++. ..++ ++..++++.+++... ......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~ 151 (233)
T PRK11629 83 ELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGER 151 (233)
T ss_pred HHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHH
Confidence 38999999988865 9999998642 1222 234556666655432 2345568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccccCCEEEEEeCCeEEEecC
Q 000511 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 812 (1455)
Q Consensus 736 qRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 812 (1455)
||++||||++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+..+|++++|++|++++.|+
T Consensus 152 qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 152 QRVAIARALVNNPRLVLADEPTGNLDARNADSIFQL-LGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999998888775 33211 24789999999999998889999999999988765
No 440
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.8e-34 Score=324.64 Aligned_cols=199 Identities=25% Similarity=0.375 Sum_probs=164.3
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------c
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 669 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 669 (1455)
++++|++++|+. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~ 75 (236)
T TIGR03864 2 LEVAGLSFAYGA---R---RALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALAR 75 (236)
T ss_pred EEEEeeEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhh
Confidence 578899998852 2 359999999999999999999999999999999999999999998875 3
Q ss_pred EEEEcCCCCC-CCcCHHHHhccCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 670 IAYVPQVPWI-LSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 670 i~y~~Q~p~l-~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
++|++|++.+ ++.|++||+.++.. .+++ +..+.++..++. ...+....+||||||||++||
T Consensus 76 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrl~la 144 (236)
T TIGR03864 76 LGVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLA-----------ERADDKVRELNGGHRRRVEIA 144 (236)
T ss_pred EEEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhcCChhhCCHHHHHHHHHH
Confidence 8999999987 46799999986532 2222 223344444443 224556679999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHHh
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
||++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 145 ral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 145 RALLHRPALLLLDEPTVGLDPASRAAIVAH-VRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHH
Confidence 999999999999999999999999988876 33311 24789999999999988899999999999999999888754
No 441
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=339.42 Aligned_cols=214 Identities=21% Similarity=0.272 Sum_probs=173.0
Q ss_pred cEEEEEEEEEecCCC-CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhccc
Q 000511 1218 LIEFQNVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i 1296 (1455)
.++++|++++|+... .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.+.
T Consensus 21 mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~------------ 88 (549)
T PRK13545 21 FDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA------------ 88 (549)
T ss_pred eeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee------------
Confidence 589999999997542 4699999999999999999999999999999999999999999999999762
Q ss_pred EEEeCCCCCCC-CcHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000511 1297 AVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1455)
Q Consensus 1297 ~~VpQdp~lf~-gTIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~ 1372 (1455)
++++.+.+++ .|++||+.... ..++++..+. ..+.++.+|++.........||||||||++|||||+.+|
T Consensus 89 -~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e~-----i~elLe~lgL~~~ld~~~~~LSGGQrQRVaLArAL~~~P 162 (549)
T PRK13545 89 -LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKEI-----IPEIIEFADIGKFIYQPVKTYSSGMKSRLGFAISVHINP 162 (549)
T ss_pred -eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHcCChhHhhCCcccCCHHHHHHHHHHHHHHhCC
Confidence 2333444444 49999986532 1233332221 122333346665566667789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHHHHHH
Q 000511 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1450 (1455)
Q Consensus 1373 ~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~ 1450 (1455)
++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++..+.. .|.+++
T Consensus 163 ~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~~~-~~~~~~ 241 (549)
T PRK13545 163 DILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDHYD-EFLKKY 241 (549)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhhHH-HHHHHH
Confidence 9999999999999999999999998753 47899999999999876 89999999999999999999987543 454444
No 442
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=325.51 Aligned_cols=197 Identities=29% Similarity=0.360 Sum_probs=164.6
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--------cEE
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIA 671 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~ 671 (1455)
..++++|++++|.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 11 ~~l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~ 84 (257)
T PRK11247 11 TPLLLNAVSKRYGE------RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTR 84 (257)
T ss_pred CcEEEEEEEEEECC------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceE
Confidence 45899999999853 2359999999999999999999999999999999999999999998865 489
Q ss_pred EEcCCCCCCC-cCHHHHhccCCCC-CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCC
Q 000511 672 YVPQVPWILS-GTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSD 749 (1455)
Q Consensus 672 y~~Q~p~l~~-~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~ 749 (1455)
|++|+|.++. .|++||+.++... .+++..+.++..++... ......+||||||||++||||+..+|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADR-----------ANEWPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999998886 6999999876321 23455666666666533 234567999999999999999999999
Q ss_pred EEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHH
Q 000511 750 IYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 814 (1455)
Q Consensus 750 illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 814 (1455)
++||||||++||+.+.+.+.+. +.... ..++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDL-IESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999888775 33211 23789999999999875 59999999999999877643
No 443
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.5e-34 Score=322.16 Aligned_cols=199 Identities=27% Similarity=0.416 Sum_probs=161.1
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|+++.|.. . ++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (222)
T cd03224 1 LEVENLNAGYGK---S---QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERAR 74 (222)
T ss_pred CEEeeEEeecCC---e---eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHh
Confidence 357888988852 2 359999999999999999999999999999999999999999998865
Q ss_pred -cEEEEcCCCCCCCc-CHHHHhccCCCCC--H---HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 669 -SIAYVPQVPWILSG-TIRDNILFGKNYD--P---QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~~-ti~~nI~~g~~~~--~---~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
.++|++|++.++.. |++||+.++.... . ++..++++... .+ ......+..+||||||||++||
T Consensus 75 ~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~------~l----~~~~~~~~~~LS~G~~qrv~la 144 (222)
T cd03224 75 AGIGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP------RL----KERRKQLAGTLSGGEQQMLAIA 144 (222)
T ss_pred cCeEEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH------hh----hhhhhCchhhCCHHHHHHHHHH
Confidence 38999999998876 9999998764321 1 12223333321 11 1123456778999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHHH
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 817 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 817 (1455)
||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 145 ral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 145 RALMSRPKLLLLDEPSEGLAPKIVEEIFEA-IRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHhcCCCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 999999999999999999999999888776 33312257899999999998765 9999999999999999887764
No 444
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2e-34 Score=320.67 Aligned_cols=188 Identities=32% Similarity=0.436 Sum_probs=154.6
Q ss_pred EEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--------cEEEEcC
Q 000511 604 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAYVPQ 675 (1455)
Q Consensus 604 ~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~y~~Q 675 (1455)
++|+++.|+. . .+++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 2 ~~~l~~~~~~---~---~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q 75 (213)
T cd03235 2 VEDLTVSYGG---H---PVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQ 75 (213)
T ss_pred cccceeEECC---E---EeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEecc
Confidence 5677888752 2 359999999999999999999999999999999999999999999987 3999999
Q ss_pred CCCC---CCcCHHHHhccCCCC-----------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 676 VPWI---LSGTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 676 ~p~l---~~~ti~~nI~~g~~~-----------~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
+|.+ ++.|++||+.++... ++++.+++++.++++..+. ....+||||||||++||
T Consensus 76 ~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la 144 (213)
T cd03235 76 RRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRVLLA 144 (213)
T ss_pred ccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHHHH
Confidence 9976 557999999875321 1234566677777754333 24458999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEe
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1455)
||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++| +++.
T Consensus 145 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~ 212 (213)
T cd03235 145 RALVQDPDLLLLDEPFAGVDPKTQEDIYEL-LRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVAS 212 (213)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-Eeec
Confidence 999999999999999999999999988776 33312257899999999999865 9999999886 5443
No 445
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=328.83 Aligned_cols=204 Identities=23% Similarity=0.345 Sum_probs=169.3
Q ss_pred CceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEcC-----
Q 000511 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG----- 668 (1455)
Q Consensus 599 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~----- 668 (1455)
+..++++|+++.|.. . .+|+|+||+|++|++++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 17 ~~~l~~~nl~~~~~~---~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~ 90 (267)
T PRK14235 17 EIKMRARDVSVFYGE---K---QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYD 90 (267)
T ss_pred CceEEEEeEEEEECC---E---EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcc
Confidence 457899999999852 2 359999999999999999999999999999999999974 899998765
Q ss_pred ----------cEEEEcCCCCCCCcCHHHHhccCCC---C--C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000511 669 ----------SIAYVPQVPWILSGTIRDNILFGKN---Y--D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 729 (1455)
Q Consensus 669 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~---~--~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~ 729 (1455)
.++|++|+|.+++.|++||+.++.. . + .++..++++.+++..++. +..+..+.+
T Consensus 91 ~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 163 (267)
T PRK14235 91 PRLDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTG 163 (267)
T ss_pred cccchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCccc
Confidence 3899999999998899999987531 1 1 123455666666643322 123556779
Q ss_pred cccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEE
Q 000511 730 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 808 (1455)
Q Consensus 730 LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~ 808 (1455)
||||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|+++
T Consensus 164 LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~ 241 (267)
T PRK14235 164 LSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEEL-IDE-LRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLV 241 (267)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHH-HHH-HhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999998888775 433 3346899999999999864 9999999999999
Q ss_pred EecCHHHHH
Q 000511 809 WIGSSADLA 817 (1455)
Q Consensus 809 ~~g~~~~l~ 817 (1455)
+.|+++++.
T Consensus 242 ~~g~~~~~~ 250 (267)
T PRK14235 242 EVGDTEKMF 250 (267)
T ss_pred EeCCHHHHH
Confidence 999988875
No 446
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-34 Score=323.44 Aligned_cols=202 Identities=28% Similarity=0.402 Sum_probs=164.3
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|+++.|..... ..++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~~~~l~~~~~~~~~--~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (233)
T cd03258 2 IELKNVSKVFGDTGG--KVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRK 79 (233)
T ss_pred eEEecceEEccCCCC--ceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHH
Confidence 578999999863210 01459999999999999999999999999999999999999999998764
Q ss_pred ---cEEEEcCCCCCCC-cCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
.++|++|+|.++. .|++||+.++.. .+. ++..+.++..++... ......+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 148 (233)
T cd03258 80 ARRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDK-----------ADAYPAQLSGGQKQR 148 (233)
T ss_pred HHhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhcChhhCCHHHHHH
Confidence 3899999999986 599999987521 222 233444555555432 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 815 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 815 (1455)
++||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (233)
T cd03258 149 VGIARALANNPKVLLCDEATSALDPETTQSILAL-LRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEE 227 (233)
T ss_pred HHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 9999999999999999999999999999888776 332122 37899999999999865 99999999999999999887
Q ss_pred HH
Q 000511 816 LA 817 (1455)
Q Consensus 816 l~ 817 (1455)
+.
T Consensus 228 ~~ 229 (233)
T cd03258 228 VF 229 (233)
T ss_pred Hh
Confidence 64
No 447
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.1e-34 Score=320.61 Aligned_cols=192 Identities=30% Similarity=0.426 Sum_probs=157.6
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------cE
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 670 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 670 (1455)
++++|+++.|+. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 i~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i 74 (213)
T cd03301 1 VELENVTKRFGN---V---TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDI 74 (213)
T ss_pred CEEEeeEEEECC---e---eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceE
Confidence 357889998853 2 359999999999999999999999999999999999999999999875 38
Q ss_pred EEEcCCCCCCC-cCHHHHhccCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHH
Q 000511 671 AYVPQVPWILS-GTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 742 (1455)
Q Consensus 671 ~y~~Q~p~l~~-~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalAR 742 (1455)
+|++|++.++. .|++||+.++.. .+++ +..+.++..+++.. ......+||||||||++|||
T Consensus 75 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~lar 143 (213)
T cd03301 75 AMVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHL-----------LDRKPKQLSGGQRQRVALGR 143 (213)
T ss_pred EEEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-----------HhCChhhCCHHHHHHHHHHH
Confidence 99999999885 599999987522 2222 33444555555432 23445689999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcccccc-CCEEEEEeCCeEEEec
Q 000511 743 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 743 aly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1455)
|++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 144 al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 144 AIVREPKVFLMDEPLSNLDAKLRVQMRAE-LKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999988876 332122 37899999999998765 9999999999998765
No 448
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=328.49 Aligned_cols=207 Identities=26% Similarity=0.331 Sum_probs=172.0
Q ss_pred CCCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEcC---
Q 000511 597 SKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG--- 668 (1455)
Q Consensus 597 ~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~--- 668 (1455)
.....++++|+++.|+. . ++|+|+||++++||+++|+||||||||||+++|.|.++ |++|+|.++|
T Consensus 16 ~~~~~l~~~nl~~~~~~---~---~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~ 89 (267)
T PRK14237 16 EEEIALSTKDLHVYYGK---K---EAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDI 89 (267)
T ss_pred CCCeEEEEeeEEEEECC---e---eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEc
Confidence 34557899999999852 2 35999999999999999999999999999999999986 5899998765
Q ss_pred ------------cEEEEcCCCCCCCcCHHHHhccCCC----CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000511 669 ------------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1455)
Q Consensus 669 ------------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~ 728 (1455)
.++|++|+|.++..|++|||.++.. .++ ++..++++.+++..++. +..+..+.
T Consensus 90 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~ 162 (267)
T PRK14237 90 NRKEINVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSAL 162 (267)
T ss_pred ccccCChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcc
Confidence 3899999999998999999987532 122 33455666666654332 23456778
Q ss_pred ccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeE
Q 000511 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQV 807 (1455)
Q Consensus 729 ~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i 807 (1455)
+||||||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.++.|+|++||+++.+. .||++++|++|++
T Consensus 163 ~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i 240 (267)
T PRK14237 163 TLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEET-MFE-LKKNYTIIIVTHNMQQAARASDYTAFFYLGDL 240 (267)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999998888775 333 345689999999999876 5999999999999
Q ss_pred EEecCHHHHHh
Q 000511 808 KWIGSSADLAV 818 (1455)
Q Consensus 808 ~~~g~~~~l~~ 818 (1455)
++.|+++++..
T Consensus 241 ~~~g~~~~~~~ 251 (267)
T PRK14237 241 IEYDKTRNIFT 251 (267)
T ss_pred EEeCCHHHHhc
Confidence 99999988753
No 449
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.1e-34 Score=318.01 Aligned_cols=197 Identities=23% Similarity=0.297 Sum_probs=144.4
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccE
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~ 1297 (1455)
.+-+.||+|.|+. ..|.+++++|-|.--.+|+||||+|-|||||+++|.|-++|+.|+..=+ -|-+||
T Consensus 586 vLGlH~VtFgy~g-qkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPG-QKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCC-CCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 4678999999964 4679999999999999999999999999999999999999999986543 255788
Q ss_pred EEeCCCC--C-CCCcHHHhcCcCCCCChHHHHHHHHHhcHHHHHHhCCCchhhhc-CCCCCChhHHHHHHHHHHHccCCC
Q 000511 1298 VVPQSPF--L-FEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKE-SGISFSVGQRQLICLARALLKSSK 1373 (1455)
Q Consensus 1298 ~VpQdp~--l-f~gTIreNLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e-~G~~LSgGQrQrl~LARAlLr~~~ 1373 (1455)
...|..- | -..|--|.|.-.-...-++-+.+|-..| |.+.... .-..||||||-|+++|-.-++.|+
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fG---------L~sHAHTikikdLSGGQKaRValaeLal~~PD 724 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARKQLGTFG---------LASHAHTIKIKDLSGGQKARVALAELALGGPD 724 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHHHhhhhh---------hhhccceEeeeecCCcchHHHHHHHHhcCCCC
Confidence 8888652 1 1223333332111112233334444433 3332110 123699999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhhC-EEEEEeCCeEEEe-CChhH
Q 000511 1374 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMD-EILILDHGHLVEQ-GNPQT 1437 (1455)
Q Consensus 1374 ILlLDEaTS~lD~~te~~I~~~i~~~~~~~TvI~IaHrl~ti~~~D-rI~vl~~G~ive~-G~p~e 1437 (1455)
||||||||.+||.++-..+-++|+++ +..||+|+|+-..|...| ..+|+++-.|-|. |.+++
T Consensus 725 vlILDEPTNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eIdGdFeD 788 (807)
T KOG0066|consen 725 VLILDEPTNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCNLWVVENQGIDEIDGDFED 788 (807)
T ss_pred EEEecCCCCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCceEEEEccCChhhccccHHH
Confidence 99999999999999999999999886 457999999988887543 3566666555442 44443
No 450
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.9e-34 Score=334.65 Aligned_cols=202 Identities=26% Similarity=0.393 Sum_probs=166.2
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|+++.|.. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~~i~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 76 (303)
T TIGR01288 3 VAIDLVGVSKSYGD---K---VVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLAR 76 (303)
T ss_pred cEEEEEeEEEEeCC---e---EEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHh
Confidence 45889999999853 2 359999999999999999999999999999999999999999999865
Q ss_pred -cEEEEcCCCCCCC-cCHHHHhcc-CC--CCCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHH
Q 000511 669 -SIAYVPQVPWILS-GTIRDNILF-GK--NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~-~ti~~nI~~-g~--~~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 739 (1455)
.+||++|++.++. .|++||+.+ +. ..+.+ +..++++.+++... ......+||||||||++
T Consensus 77 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-----------~~~~~~~LSgG~~qrv~ 145 (303)
T TIGR01288 77 VAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADVRVALLSGGMKRRLT 145 (303)
T ss_pred hcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-----------hcCchhhCCHHHHHHHH
Confidence 4899999998875 599999974 22 12322 23344555544322 23345689999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHHHh
Q 000511 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1455)
Q Consensus 740 lARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1455)
||||++.+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 146 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 146 LARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999988776 33312357899999999999865 99999999999999999999864
Q ss_pred c
Q 000511 819 S 819 (1455)
Q Consensus 819 ~ 819 (1455)
.
T Consensus 225 ~ 225 (303)
T TIGR01288 225 E 225 (303)
T ss_pred h
Confidence 3
No 451
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-34 Score=319.76 Aligned_cols=190 Identities=24% Similarity=0.349 Sum_probs=157.8
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------c
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 669 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 669 (1455)
++++|+++.|.. . ++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~---~---~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 73 (211)
T cd03264 1 LQLENLTKRYGK---K---RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRR 73 (211)
T ss_pred CEEEEEEEEECC---E---EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhh
Confidence 367899998853 2 3599999999999 9999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCc-CHHHHhccCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 670 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 670 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
++|++|+|.++.. |++||+.+... .+ +++.+++++.+++....+ ....+||||||||++||
T Consensus 74 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la 142 (211)
T cd03264 74 IGYLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIA 142 (211)
T ss_pred eEEecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHH
Confidence 8999999998875 99999986321 12 234455666666654322 34468999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEec
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 811 (1455)
||++++|+++||||||++||+.+.+++.+. +.. ..+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 143 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 143 QALVGDPSILIVDEPTAGLDPEERIRFRNL-LSE-LGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999988876 333 334689999999999986 49999999999998654
No 452
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-34 Score=329.86 Aligned_cols=206 Identities=24% Similarity=0.376 Sum_probs=170.6
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|++++|+...+...+++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 47899999999643210113469999999999999999999999999999999999999999998875
Q ss_pred --cEEEEcCCCC--CCCcCHHHHhccCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 --SIAYVPQVPW--ILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 --~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
.++|++|+|. +++.|+.||+.|+.. .+ +++.+++++.++|..... .....||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRR-----------HAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHH
Confidence 3899999985 666799999998632 22 234566777777765443 3346899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l 816 (1455)
++||||++.+|+++||||||++||+.+.+.+.+. +..... .+.|+|++||+++.+..||++++|++|++++.|+++++
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNT-IKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988775 433112 37899999999999888999999999999999999988
Q ss_pred Hh
Q 000511 817 AV 818 (1455)
Q Consensus 817 ~~ 818 (1455)
..
T Consensus 232 ~~ 233 (280)
T PRK13633 232 FK 233 (280)
T ss_pred hc
Confidence 54
No 453
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.9e-34 Score=308.95 Aligned_cols=166 Identities=33% Similarity=0.550 Sum_probs=148.6
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------c
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 669 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 669 (1455)
++++|++++|.... .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (178)
T cd03247 1 LSINNVSFSYPEQE----QQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSL 76 (178)
T ss_pred CEEEEEEEEeCCCC----ccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhh
Confidence 36789999986421 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCC
Q 000511 670 IAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSD 749 (1455)
Q Consensus 670 i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~ 749 (1455)
++|++|+|++++.|++||| ..+||||||||++||||++.+|+
T Consensus 77 i~~~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~ 118 (178)
T cd03247 77 ISVLNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAP 118 (178)
T ss_pred EEEEccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCC
Confidence 8999999999999999998 45899999999999999999999
Q ss_pred EEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCCeEEEec
Q 000511 750 IYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 750 illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g 811 (1455)
++||||||++||+.+.+.+++. +.. +.+++|+|++||+.+.++.||++++|++|++++.|
T Consensus 119 ~lllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 119 IVLLDEPTVGLDPITERQLLSL-IFE-VLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEEECCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999888876 433 34578999999999999889999999999998654
No 454
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.6e-34 Score=342.13 Aligned_cols=200 Identities=26% Similarity=0.402 Sum_probs=167.8
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|++++|.. ..+|+|+||++++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 3 ~L~~~nls~~y~~------~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~ 76 (402)
T PRK09536 3 MIDVSDLSVEFGD------TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAAS 76 (402)
T ss_pred eEEEeeEEEEECC------EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHh
Confidence 4789999999853 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCCC-CCcCHHHHhccCCC-----C------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHH
Q 000511 669 -SIAYVPQVPWI-LSGTIRDNILFGKN-----Y------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1455)
Q Consensus 669 -~i~y~~Q~p~l-~~~ti~~nI~~g~~-----~------~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQk 735 (1455)
.+|||+|++.+ ++.|++||+.++.. + +.++.+++++..++.... .....+||||||
T Consensus 77 ~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~-----------~~~~~~LSgGer 145 (402)
T PRK09536 77 RRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFA-----------DRPVTSLSGGER 145 (402)
T ss_pred cceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHH
Confidence 48999999987 56799999988641 1 123455666666664322 234568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHH
Q 000511 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 814 (1455)
Q Consensus 736 qRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 814 (1455)
||++|||||+++|+++||||||++||+.....+++. +.....+++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 146 QRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~l-L~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ 224 (402)
T PRK09536 146 QRVLLARALAQATPVLLLDEPTASLDINHQVRTLEL-VRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPA 224 (402)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHH
Confidence 999999999999999999999999999988888765 3331224789999999999985 59999999999999999999
Q ss_pred HHHh
Q 000511 815 DLAV 818 (1455)
Q Consensus 815 ~l~~ 818 (1455)
++..
T Consensus 225 ev~~ 228 (402)
T PRK09536 225 DVLT 228 (402)
T ss_pred HHhC
Confidence 8754
No 455
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.2e-34 Score=323.48 Aligned_cols=197 Identities=26% Similarity=0.370 Sum_probs=161.7
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--------------
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 668 (1455)
+++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 75 (232)
T cd03218 2 RAENLSKRYGK---R---KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARL 75 (232)
T ss_pred eEEEEEEEeCC---E---EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhc
Confidence 57889998852 2 359999999999999999999999999999999999999999998864
Q ss_pred cEEEEcCCCCCCCc-CHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHH
Q 000511 669 SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 740 (1455)
Q Consensus 669 ~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRval 740 (1455)
.++|++|++.++.. |++||+.++.+ .++ ++.++.++..++.. .......+||||||||++|
T Consensus 76 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~l 144 (232)
T cd03218 76 GIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITH-----------LRKSKASSLSGGERRRVEI 144 (232)
T ss_pred cEEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHHHH
Confidence 38999999988876 99999987532 121 12334444444432 2345667999999999999
Q ss_pred HHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHHH
Q 000511 741 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 817 (1455)
Q Consensus 741 ARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 817 (1455)
|||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 145 a~al~~~p~llllDEPt~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 145 ARALATNPKFLLLDEPFAGVDPIAVQDIQKI-IKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhh
Confidence 9999999999999999999999998888775 33212347899999999987665 9999999999999999887764
No 456
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-34 Score=330.45 Aligned_cols=203 Identities=28% Similarity=0.384 Sum_probs=169.2
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCC---cEEEEcC--------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH---GSIHASG-------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~---G~i~~~~-------- 668 (1455)
..++++|+++.|+.. . .++++|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|
T Consensus 4 ~~l~i~~l~~~~~~~-~---~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~ 79 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-K---KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTV 79 (282)
T ss_pred ceEEEEEEEEEcCCC-C---ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCH
Confidence 468899999999632 1 235999999999999999999999999999999999999988 8998865
Q ss_pred -----cEEEEcCCCC--CCCcCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000511 669 -----SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1455)
Q Consensus 669 -----~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQ 734 (1455)
.++||+|+|+ +++.|++|||.|+.. .++ ++..++++.++++... .....+|||||
T Consensus 80 ~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LS~G~ 148 (282)
T PRK13640 80 WDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYI-----------DSEPANLSGGQ 148 (282)
T ss_pred HHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHh-----------cCCcccCCHHH
Confidence 4899999995 567899999987632 233 2355666777775433 33446999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccccCCEEEEEeCCeEEEecCH
Q 000511 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSS 813 (1455)
Q Consensus 735 kqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~ 813 (1455)
|||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+..||++++|++|++++.|++
T Consensus 149 ~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~ 227 (282)
T PRK13640 149 KQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKL-IRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSP 227 (282)
T ss_pred HHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999988876 333122 37899999999999888999999999999999999
Q ss_pred HHHHh
Q 000511 814 ADLAV 818 (1455)
Q Consensus 814 ~~l~~ 818 (1455)
+++..
T Consensus 228 ~~~~~ 232 (282)
T PRK13640 228 VEIFS 232 (282)
T ss_pred HHHhc
Confidence 88754
No 457
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=331.78 Aligned_cols=206 Identities=25% Similarity=0.397 Sum_probs=167.3
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|+++.|..... ...++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~~~~~~~-~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13641 2 SIKFENVDYIYSPGTP-MEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNL 80 (287)
T ss_pred EEEEEEEEEEcCCCCC-ccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4688999999963211 012469999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCC--CCCCcCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000511 669 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1455)
Q Consensus 669 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQ 734 (1455)
.++|++|+| .+++.|++|||.++.. .+. ++..++++.++++.+. ......+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq 150 (287)
T PRK13641 81 KKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDL----------ISKSPFELSGGQ 150 (287)
T ss_pred HHHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH----------hhCCcccCCHHH
Confidence 389999998 5777899999987531 222 2345556666664222 234566899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCH
Q 000511 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 813 (1455)
Q Consensus 735 kqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~ 813 (1455)
|||++||||+..+|+++||||||++||+...+.+.+. +.....++.|+|++||+++.+. .||+|++|++|++++.|++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~-l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~ 229 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQL-FKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASP 229 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999998887765 4331234789999999999876 5999999999999999999
Q ss_pred HHHHh
Q 000511 814 ADLAV 818 (1455)
Q Consensus 814 ~~l~~ 818 (1455)
+++..
T Consensus 230 ~~~~~ 234 (287)
T PRK13641 230 KEIFS 234 (287)
T ss_pred HHHhc
Confidence 88753
No 458
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.9e-34 Score=361.14 Aligned_cols=215 Identities=28% Similarity=0.448 Sum_probs=175.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCC--CCCCceEEEC----------------
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVD---------------- 1280 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~--~~~~G~I~Id---------------- 1280 (1455)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~ 78 (520)
T TIGR03269 1 IEVKNLTKKFDG--KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKV 78 (520)
T ss_pred CEEEEEEEEECC--eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccc
Confidence 578999999953 46999999999999999999999999999999999996 7999999997
Q ss_pred -------CEeCC-------CCC---hHHHhcccEEEeCC-CCCCCC-cHHHhcCcCC---CCChHHHHHHHHHhcHHHHH
Q 000511 1281 -------GLNII-------NTP---VRDLRGRFAVVPQS-PFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEV 1338 (1455)
Q Consensus 1281 -------G~di~-------~i~---~~~lR~~i~~VpQd-p~lf~g-TIreNLdp~~---~~~d~ei~~aL~~~~l~~~i 1338 (1455)
|.++. ..+ ...+|++++++||+ +.+|+. |+++|+.+.. ..+..+.. ....+.+
T Consensus 79 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l 153 (520)
T TIGR03269 79 GEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV-----GRAVDLI 153 (520)
T ss_pred ccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHH
Confidence 33331 111 23467889999998 567764 9999996421 11222211 1223445
Q ss_pred HhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh
Q 000511 1339 EAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL 1416 (1455)
Q Consensus 1339 ~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~ 1416 (1455)
+.+|++........+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.
T Consensus 154 ~~~gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~ 233 (520)
T TIGR03269 154 EMVQLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIE 233 (520)
T ss_pred HHcCChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHH
Confidence 55577665666667899999999999999999999999999999999999999999998864 3789999999999987
Q ss_pred h-hCEEEEEeCCeEEEeCChhHHhc
Q 000511 1417 N-MDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1417 ~-~DrI~vl~~G~ive~G~p~eLl~ 1440 (1455)
. ||+|++|++|++++.|+++++.+
T Consensus 234 ~~~d~i~~l~~G~i~~~g~~~~~~~ 258 (520)
T TIGR03269 234 DLSDKAIWLENGEIKEEGTPDEVVA 258 (520)
T ss_pred HhcCEEEEEeCCEEeeecCHHHHHH
Confidence 5 89999999999999999998865
No 459
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=326.51 Aligned_cols=203 Identities=26% Similarity=0.321 Sum_probs=167.5
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcC---ccC--CCcEEEEcC-------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGE---MML--THGSIHASG------- 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~---~~~--~~G~i~~~~------- 668 (1455)
.++++|+++.|.. ..+|+|+||++++|++++|+||||||||||+++|+|. .++ ++|+|.++|
T Consensus 3 ~l~~~~~~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14245 3 KIDARDVNFWYGD------FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKG 76 (250)
T ss_pred EEEEEEEEEEECC------EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEeccccc
Confidence 5789999999853 2359999999999999999999999999999999996 454 589998764
Q ss_pred --------cEEEEcCCCCCCCcCHHHHhccCCC----CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000511 669 --------SIAYVPQVPWILSGTIRDNILFGKN----YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 669 --------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSG 732 (1455)
.++|++|+|.+++.|++||+.++.. .+ +++..++++.+++..++. +..+..+.+|||
T Consensus 77 ~~~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 149 (250)
T PRK14245 77 VQVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSG 149 (250)
T ss_pred ccHHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCH
Confidence 3899999999998999999987531 11 123455666666643332 224566789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEec
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 811 (1455)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 150 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~ 227 (250)
T PRK14245 150 GQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEEL-IHE-LKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYD 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999988776 433 345789999999999885 49999999999999999
Q ss_pred CHHHHHh
Q 000511 812 SSADLAV 818 (1455)
Q Consensus 812 ~~~~l~~ 818 (1455)
+++++..
T Consensus 228 ~~~~~~~ 234 (250)
T PRK14245 228 DTKKIFT 234 (250)
T ss_pred CHHHHhc
Confidence 9998853
No 460
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=4.9e-34 Score=319.40 Aligned_cols=197 Identities=25% Similarity=0.290 Sum_probs=157.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
+.++|++.+|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +....
T Consensus 23 l~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~-----~~~~~- 94 (224)
T cd03220 23 LGILGRKGEVGE--FWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSLL-----GLGGG- 94 (224)
T ss_pred hhhhhhhhhcCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchhh-----ccccc-
Confidence 678888888864 4699999999999999999999999999999999999999999999999986421 11111
Q ss_pred EeCCCCCCCCcHHHhcCcCCC---CChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000511 1299 VPQSPFLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1455)
Q Consensus 1299 VpQdp~lf~gTIreNLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~IL 1375 (1455)
+..+.|++||+..... .+.++..+ ...+.++.+|++.........||||||||++||||++++|+++
T Consensus 95 -----~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 164 (224)
T cd03220 95 -----FNPELTGRENIYLNGRLLGLSRKEIDE-----KIDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIATALEPDIL 164 (224)
T ss_pred -----CCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 2235699999864321 12222111 1222333346655555555689999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeC
Q 000511 1376 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1376 lLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1433 (1455)
||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 165 llDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 165 LIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999998764 46899999999999875 8999999999998865
No 461
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=3.5e-34 Score=320.56 Aligned_cols=193 Identities=25% Similarity=0.385 Sum_probs=159.3
Q ss_pred EEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEEEeCCCCC---CCCcHHHhcCcC
Q 000511 1241 FTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL---FEGSLRDNLDPF 1317 (1455)
Q Consensus 1241 l~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~VpQdp~l---f~gTIreNLdp~ 1317 (1455)
|+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..|++++|+||+|.+ |+.|+++|+...
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~-----~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~ 75 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPPAKGTVKVAGASPG-----KGWRHIGYVPQRHEFAWDFPISVAHTVMSG 75 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCccch-----HhhCcEEEecccccccCCCCccHHHHHHhc
Confidence 578999999999999999999999999999999999999998864 357789999999976 457999998543
Q ss_pred CC--------CC---hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCH
Q 000511 1318 HM--------ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDA 1386 (1455)
Q Consensus 1318 ~~--------~~---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD~ 1386 (1455)
.. .. ++++.++++.+ |++.........||+|||||++||||++++|+++||||||++||.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~ 146 (223)
T TIGR03771 76 RTGHIGWLRRPCVADFAAVRDALRRV---------GLTELADRPVGELSGGQRQRVLVARALATRPSVLLLDEPFTGLDM 146 (223)
T ss_pred cccccccccCCcHHHHHHHHHHHHHh---------CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 11 11 12233334443 555444555567999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCChhHHhccCCcHHHHHH
Q 000511 1387 QTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1450 (1455)
Q Consensus 1387 ~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~p~eLl~~~~s~f~~l~ 1450 (1455)
.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|+++ +|++++.|+++++.++. ...+++
T Consensus 147 ~~~~~l~~~l~~~~~~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~~~~~--~~~~~~ 209 (223)
T TIGR03771 147 PTQELLTELFIELAGAGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQLQDPA--PWMTTF 209 (223)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHhcChH--HHHHHh
Confidence 99999999998764 47899999999998865 8999999 79999999999997642 344443
No 462
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-34 Score=330.29 Aligned_cols=201 Identities=23% Similarity=0.360 Sum_probs=168.3
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|+++.|+.. ..+|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~-----~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~ 79 (283)
T PRK13636 5 ILKVEELNYNYSDG-----THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMK 79 (283)
T ss_pred eEEEEeEEEEeCCC-----CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHH
Confidence 58899999999521 2359999999999999999999999999999999999999999998875
Q ss_pred ---cEEEEcCCC--CCCCcCHHHHhccCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHH
Q 000511 669 ---SIAYVPQVP--WILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 736 (1455)
Q Consensus 669 ---~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkq 736 (1455)
.++|++|+| .+++.|++|||.++.. +. .++..++++.++|... ......+|||||||
T Consensus 80 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~q 148 (283)
T PRK13636 80 LRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFGQKK 148 (283)
T ss_pred HHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHHHHH
Confidence 389999998 5778899999987531 22 2345556666666432 24567799999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHH
Q 000511 737 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 814 (1455)
Q Consensus 737 RvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 814 (1455)
|++|||||+.+|+++||||||++||+...+.+.+. +..... .|+|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 149 rl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~ 227 (283)
T PRK13636 149 RVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKL-LVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPK 227 (283)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999887775 332122 2789999999999987 59999999999999999998
Q ss_pred HHHh
Q 000511 815 DLAV 818 (1455)
Q Consensus 815 ~l~~ 818 (1455)
++..
T Consensus 228 ~~~~ 231 (283)
T PRK13636 228 EVFA 231 (283)
T ss_pred HHhc
Confidence 8754
No 463
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.4e-34 Score=320.19 Aligned_cols=196 Identities=21% Similarity=0.337 Sum_probs=160.1
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------c
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 669 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 669 (1455)
++++|+++.|+... ...++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 2 l~~~~v~~~~~~~~--~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (218)
T cd03266 2 ITADALTKRFRDVK--KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRR 79 (218)
T ss_pred eEEEEEEEecCCCC--ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhh
Confidence 57899999986421 112469999999999999999999999999999999999999999999875 4
Q ss_pred EEEEcCCCCCCCc-CHHHHhccCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 670 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 670 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
++|++|+|.++.. |++||+.+... .+ .++..+.++..++... ......+||||||||++||
T Consensus 80 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 148 (218)
T cd03266 80 LGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEEL-----------LDRRVGGFSTGMRQKVAIA 148 (218)
T ss_pred EEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhhhhhhcCHHHHHHHHHH
Confidence 8999999998875 99999975321 22 2234455666555432 3346678999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEec
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1455)
||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+.+.+.. ||++++|++|++.+.|
T Consensus 149 ral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 149 RALVHDPPVLLLDEPTTGLDVMATRALREF-IRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHhcCCCEEEEcCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999998888776 33312347899999999998764 9999999999998654
No 464
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-34 Score=326.39 Aligned_cols=204 Identities=23% Similarity=0.338 Sum_probs=166.7
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc--C---CCcEEEEcC------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM--L---THGSIHASG------ 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~--~---~~G~i~~~~------ 668 (1455)
..++++|+++.|.. . ++|+|+||+|++||+++|+|+||||||||+++|+|.++ | ++|+|.++|
T Consensus 11 ~~l~i~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~ 84 (259)
T PRK14274 11 EVYQINGMNLWYGQ---H---HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKG 84 (259)
T ss_pred ceEEEeeEEEEECC---e---eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEcccc
Confidence 35899999999852 2 35999999999999999999999999999999999987 3 589998754
Q ss_pred ---------cEEEEcCCCCCCCcCHHHHhccCCCC----CHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000511 669 ---------SIAYVPQVPWILSGTIRDNILFGKNY----DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1455)
Q Consensus 669 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LS 731 (1455)
.++|++|+|.+++.|++||+.++... +++ +..++++..++.+++. +..+..+.+||
T Consensus 85 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS 157 (259)
T PRK14274 85 KVDLVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLS 157 (259)
T ss_pred ccCHHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCC
Confidence 38999999999989999999876321 222 2333455555543221 22356677999
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEe
Q 000511 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWI 810 (1455)
Q Consensus 732 GGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~ 810 (1455)
||||||++||||++.+|+++||||||++||+++.+.+.+. +.. +.+++|+|++||+++.+. .||++++|++|++++.
T Consensus 158 ~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~ 235 (259)
T PRK14274 158 GGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEEL-ILK-LKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVEC 235 (259)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999998887765 433 344689999999999876 4999999999999999
Q ss_pred cCHHHHHh
Q 000511 811 GSSADLAV 818 (1455)
Q Consensus 811 g~~~~l~~ 818 (1455)
|+++++..
T Consensus 236 g~~~~~~~ 243 (259)
T PRK14274 236 NDTNKMFS 243 (259)
T ss_pred CCHHHHhh
Confidence 99988753
No 465
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-34 Score=324.67 Aligned_cols=200 Identities=25% Similarity=0.387 Sum_probs=162.9
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------c
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 669 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 669 (1455)
+++|++++|+.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (242)
T cd03295 2 EFENVTKRYGGG-----KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRK 76 (242)
T ss_pred EEEEEEEEeCCc-----ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcc
Confidence 578899988631 2359999999999999999999999999999999999999999998865 4
Q ss_pred EEEEcCCCCCCC-cCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 670 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 670 i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
++|++|+|.++. .|++||+.++.. .+. ++..++++..++.. .......+.+||||||||++||
T Consensus 77 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~la 147 (242)
T cd03295 77 IGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVA 147 (242)
T ss_pred eEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHH
Confidence 899999999886 599999987532 222 23344455544432 0123456679999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHHH
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLA 817 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~ 817 (1455)
||++.+|++++|||||++||+.+.+.+.+. +..... +++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 148 ral~~~p~llllDEPt~~LD~~~~~~l~~~-L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 148 RALAADPPLLLMDEPFGALDPITRDQLQEE-FKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999998888776 332122 3789999999999865 59999999999999999888774
No 466
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-34 Score=327.48 Aligned_cols=203 Identities=27% Similarity=0.414 Sum_probs=167.4
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|+++.|+.. . +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 6 ~~l~~~nl~~~~~~~-~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~ 81 (271)
T PRK13632 6 VMIKVENVSFSYPNS-E---NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEI 81 (271)
T ss_pred eEEEEEeEEEEcCCC-C---ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHH
Confidence 468999999999632 1 2359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCC--CCCcCHHHHhccCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 --SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 --~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
.++||+|+|. +++.|++|||.++.. ++++ +..++++..++...+ .....+||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr 150 (271)
T PRK13632 82 RKKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYL-----------DKEPQNLSGGQKQR 150 (271)
T ss_pred hcceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCCcccCCHHHHHH
Confidence 3899999984 557799999987532 3333 234555666665433 34456999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC-CceEEEEccCccccccCCEEEEEeCCeEEEecCHHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~-~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l 816 (1455)
++||||++.+|+++||||||++||+.+.+.+++. +.....+ ++|+|++||+++.+..||++++|++|++.+.|+.+++
T Consensus 151 l~laral~~~p~lllLDEP~~gLD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 229 (271)
T PRK13632 151 VAIASVLALNPEIIIFDESTSMLDPKGKREIKKI-MVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEI 229 (271)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999888876 3331223 4899999999998888999999999999999998876
Q ss_pred Hh
Q 000511 817 AV 818 (1455)
Q Consensus 817 ~~ 818 (1455)
..
T Consensus 230 ~~ 231 (271)
T PRK13632 230 LN 231 (271)
T ss_pred hc
Confidence 43
No 467
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-34 Score=326.74 Aligned_cols=205 Identities=25% Similarity=0.346 Sum_probs=167.7
Q ss_pred CceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEcC-----
Q 000511 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG----- 668 (1455)
Q Consensus 599 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~----- 668 (1455)
+..++++|+++.|.. . .+|+|+||+|++|++++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 11 ~~~l~i~nl~~~~~~---~---~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~ 84 (269)
T PRK14259 11 NIIISLQNVTISYGT---F---EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYD 84 (269)
T ss_pred CceEEEEeEEEEECC---E---EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 456899999999853 2 35999999999999999999999999999999999987 5899998764
Q ss_pred ----------cEEEEcCCCCCCCcCHHHHhccCCCC---C---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000511 669 ----------SIAYVPQVPWILSGTIRDNILFGKNY---D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 669 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~~---~---~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSG 732 (1455)
.++|++|+|.++..|++||+.++... + +++..++++.+++...+. +.......+|||
T Consensus 85 ~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 157 (269)
T PRK14259 85 PRVDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSG 157 (269)
T ss_pred ccCCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCH
Confidence 38999999999888999999976432 2 223344555555432221 234556779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeC-------
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDK------- 804 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~------- 804 (1455)
|||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+. .||++++|++
T Consensus 158 G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~ 235 (269)
T PRK14259 158 GQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEET-MHE-LKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGS 235 (269)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhcCEEEEEecccccccc
Confidence 999999999999999999999999999999999988775 333 345689999999999876 4999999996
Q ss_pred ----CeEEEecCHHHHHh
Q 000511 805 ----GQVKWIGSSADLAV 818 (1455)
Q Consensus 805 ----G~i~~~g~~~~l~~ 818 (1455)
|++++.|+.+++..
T Consensus 236 ~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 236 GGKVGYLVEFNETKKIFN 253 (269)
T ss_pred ccccceEEEeCCHHHHHh
Confidence 67899999888754
No 468
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.3e-34 Score=285.09 Aligned_cols=209 Identities=27% Similarity=0.362 Sum_probs=175.4
Q ss_pred cEEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH---HH
Q 000511 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DL 1292 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~---~l 1292 (1455)
.|+.++++..-+.. .-.+|++|+|.|++||.+||||+||||||||+..|.|+-+|++|+|.+.|.++.+++-+ .+
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 57888887776543 33689999999999999999999999999999999999999999999999999998855 45
Q ss_pred h-cccEEEeCCCCCCCC-cHHHhcC-cC---CCCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000511 1293 R-GRFAVVPQSPFLFEG-SLRDNLD-PF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1366 (1455)
Q Consensus 1293 R-~~i~~VpQdp~lf~g-TIreNLd-p~---~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1366 (1455)
| +++++|.|.-.|.+. |--||+. |. ++...+. +....+.++..||...+..-...|||||+||++|||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~------~~~A~~lL~~vGLg~Rl~HyP~qLSGGEQQRVAiAR 159 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADS------RAGAKALLEAVGLGKRLTHYPAQLSGGEQQRVALAR 159 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccH------HHHHHHHHHHhCcccccccCccccCchHHHHHHHHH
Confidence 5 579999999888764 8999974 32 2211111 111233445557878888778899999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhhCEEEEEeCCeEEEe
Q 000511 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1432 (1455)
Q Consensus 1367 AlLr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1432 (1455)
|+.-+|+||+-||||-|||.+|-+.|-+.+.+.. .+.|.++|||+......|||++-|.+|+++|.
T Consensus 160 Afa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~~ 227 (228)
T COG4181 160 AFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVED 227 (228)
T ss_pred HhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceeccC
Confidence 9999999999999999999999999999886553 48899999999999999999999999999863
No 469
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=3.1e-34 Score=313.26 Aligned_cols=177 Identities=27% Similarity=0.383 Sum_probs=145.8
Q ss_pred CcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCC--CChHHHhcccEEEeCCC--CCCCC
Q 000511 1233 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRFAVVPQSP--FLFEG 1308 (1455)
Q Consensus 1233 ~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~--i~~~~lR~~i~~VpQdp--~lf~g 1308 (1455)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++++++||+| .+|..
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 84 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLFAA 84 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhccccc
Confidence 469999999999999999999999999999999999999999999999999852 23456788999999998 57888
Q ss_pred cHHHhcCcCC---CCChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCC
Q 000511 1309 SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVD 1385 (1455)
Q Consensus 1309 TIreNLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~ILlLDEaTS~lD 1385 (1455)
|++||+.+.. ..++++..+ ...+.++.+|++.........||+|||||++|||||+++|+++||||||++||
T Consensus 85 tv~~nl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 159 (190)
T TIGR01166 85 DVDQDVAFGPLNLGLSEAEVER-----RVREALTAVGASGLRERPTHCLSGGEKKRVAIAGAVAMRPDVLLLDEPTAGLD 159 (190)
T ss_pred cHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9999996421 122222211 12233344455555555667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CCcEEEEeccChhh
Q 000511 1386 AQTASILQNAISSEC-KGMTVITIAHRIST 1414 (1455)
Q Consensus 1386 ~~te~~I~~~i~~~~-~~~TvI~IaHrl~t 1414 (1455)
+++.+.+.+.|++.. +++|||+|||+++.
T Consensus 160 ~~~~~~~~~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 160 PAGREQMLAILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeecccc
Confidence 999999999998764 47899999999875
No 470
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=7.7e-34 Score=326.81 Aligned_cols=201 Identities=24% Similarity=0.344 Sum_probs=165.0
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|+++.|.. . ++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~---~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 79 (269)
T PRK11831 6 NLVDMRGVSFTRGN---R---CIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRL 79 (269)
T ss_pred ceEEEeCeEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhH
Confidence 46899999999852 2 359999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCCCCCCc-CHHHHhccCC----CCCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000511 669 -----SIAYVPQVPWILSG-TIRDNILFGK----NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1455)
Q Consensus 669 -----~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQ 734 (1455)
.++|++|++.+++. |++||+.++. ..+.+ +..+.++..++... ......+|||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq 148 (269)
T PRK11831 80 YTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGM 148 (269)
T ss_pred HHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHH
Confidence 38999999999876 9999998642 12222 23344555554322 233456899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcccccc-CCEEEEEeCCeEEEecC
Q 000511 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 812 (1455)
Q Consensus 735 kqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 812 (1455)
|||++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 149 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~ 227 (269)
T PRK11831 149 ARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKL-ISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGS 227 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999998887775 332112 37899999999998875 99999999999999999
Q ss_pred HHHHHh
Q 000511 813 SADLAV 818 (1455)
Q Consensus 813 ~~~l~~ 818 (1455)
++++..
T Consensus 228 ~~~~~~ 233 (269)
T PRK11831 228 AQALQA 233 (269)
T ss_pred HHHHhc
Confidence 988754
No 471
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-34 Score=327.60 Aligned_cols=205 Identities=25% Similarity=0.308 Sum_probs=166.4
Q ss_pred CceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEcC-----
Q 000511 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG----- 668 (1455)
Q Consensus 599 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~----- 668 (1455)
+..++++|++++|+. . .+|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 19 ~~~l~~~~l~~~~~~---~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~ 92 (268)
T PRK14248 19 EHILEVKDLSIYYGE---K---RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILD 92 (268)
T ss_pred CceEEEEEEEEEeCC---c---eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccc
Confidence 346899999999853 2 35999999999999999999999999999999999864 6899998754
Q ss_pred ----------cEEEEcCCCCCCCcCHHHHhccCCCCC--------HHHHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000511 669 ----------SIAYVPQVPWILSGTIRDNILFGKNYD--------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 730 (1455)
Q Consensus 669 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~~~--------~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~L 730 (1455)
.++|++|+|.++++|++||+.++..+. +++..++++.+++..++. ...+....+|
T Consensus 93 ~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~L 165 (268)
T PRK14248 93 SNINVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSL 165 (268)
T ss_pred ccccHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccC
Confidence 489999999999999999998753211 122333444444432221 2345677899
Q ss_pred ccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEE
Q 000511 731 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKW 809 (1455)
Q Consensus 731 SGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~ 809 (1455)
|||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++
T Consensus 166 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~ 243 (268)
T PRK14248 166 SGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEEL-ITE-LKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVE 243 (268)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHH-HHH-HhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999888765 333 344689999999999876 599999999999999
Q ss_pred ecCHHHHHh
Q 000511 810 IGSSADLAV 818 (1455)
Q Consensus 810 ~g~~~~l~~ 818 (1455)
.|+++++..
T Consensus 244 ~~~~~~~~~ 252 (268)
T PRK14248 244 YDQTEQIFT 252 (268)
T ss_pred eCCHHHHHh
Confidence 999888753
No 472
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-34 Score=316.87 Aligned_cols=190 Identities=27% Similarity=0.379 Sum_probs=157.7
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------cE
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 670 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 670 (1455)
++++|+++.|.. . ..|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 i~~~~l~~~~~~---~-----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i 72 (211)
T cd03298 1 VRLDKIRFSYGE---Q-----PMHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPV 72 (211)
T ss_pred CEEEeEEEEeCC---E-----ecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccE
Confidence 357889998852 1 1399999999999999999999999999999999999999999876 38
Q ss_pred EEEcCCCCCCCc-CHHHHhccCCC--C-----CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHH
Q 000511 671 AYVPQVPWILSG-TIRDNILFGKN--Y-----DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 742 (1455)
Q Consensus 671 ~y~~Q~p~l~~~-ti~~nI~~g~~--~-----~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalAR 742 (1455)
+|++|+|.++.+ |++||+.++.. . ++++..++++.++++..... ...+||||||||++|||
T Consensus 73 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ia~ 141 (211)
T cd03298 73 SMLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKR-----------LPGELSGGERQRVALAR 141 (211)
T ss_pred EEEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHHHHHH
Confidence 999999998875 99999987532 1 23355667777777644433 33589999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcccccc-CCEEEEEeCCeEEEec
Q 000511 743 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 743 aly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1455)
|++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 142 al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 142 VLVRDKPVLLLDEPFAALDPALRAEMLDL-VLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999988776 33311 237899999999999865 9999999999998653
No 473
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.9e-34 Score=336.27 Aligned_cols=203 Identities=26% Similarity=0.373 Sum_probs=167.6
Q ss_pred CceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC----------
Q 000511 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1455)
Q Consensus 599 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 668 (1455)
...++++|+++.|.. ..+|+|+||+|++|++++++||||||||||+++|+|.++|++|+|.++|
T Consensus 39 ~~~i~i~nl~k~y~~------~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~ 112 (340)
T PRK13536 39 TVAIDLAGVSKSYGD------KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLA 112 (340)
T ss_pred ceeEEEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHH
Confidence 356899999999853 2359999999999999999999999999999999999999999999876
Q ss_pred --cEEEEcCCCCCC-CcCHHHHhcc-CCC--CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000511 669 --SIAYVPQVPWIL-SGTIRDNILF-GKN--YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1455)
Q Consensus 669 --~i~y~~Q~p~l~-~~ti~~nI~~-g~~--~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 738 (1455)
.+|||+|++.++ +.|++||+.+ +.. .+. ++.+++++.++|... ...+..+||||||||+
T Consensus 113 ~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-----------~~~~~~~LS~G~kqrv 181 (340)
T PRK13536 113 RARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADARVSDLSGGMKRRL 181 (340)
T ss_pred hccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hCCChhhCCHHHHHHH
Confidence 499999999986 4599999975 321 122 223344444444321 2334458999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHHH
Q 000511 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 817 (1455)
Q Consensus 739 alARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 817 (1455)
+||||+.++|+++||||||++||+.+.+.+.+. +......|+|+|++||+++.+.. ||+|++|++|+++..|+++++.
T Consensus 182 ~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~-l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~ 260 (340)
T PRK13536 182 TLARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALI 260 (340)
T ss_pred HHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999988876 33312357899999999999875 9999999999999999999986
Q ss_pred hc
Q 000511 818 VS 819 (1455)
Q Consensus 818 ~~ 819 (1455)
..
T Consensus 261 ~~ 262 (340)
T PRK13536 261 DE 262 (340)
T ss_pred hh
Confidence 54
No 474
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-34 Score=324.05 Aligned_cols=203 Identities=23% Similarity=0.348 Sum_probs=166.2
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCC-----CcEEEEcC-------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT-----HGSIHASG------- 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~-----~G~i~~~~------- 668 (1455)
.++++|+++.|.. . .+|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~ 77 (251)
T PRK14249 4 KIKIRGVNFFYHK---H---QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPN 77 (251)
T ss_pred eEEEEEEEEEECC---e---eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccc
Confidence 5789999999853 2 3599999999999999999999999999999999999987 69987653
Q ss_pred --------cEEEEcCCCCCCCcCHHHHhccCCCC----CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000511 669 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 669 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSG 732 (1455)
.++|++|+|.+++.|++||+.++..+ .+ ++..++++..++...+. +..+..+.+|||
T Consensus 78 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 150 (251)
T PRK14249 78 LDVVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSG 150 (251)
T ss_pred cChHHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCH
Confidence 39999999999989999999876321 11 22233334444432221 234567889999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEec
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1455)
||||||+||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 151 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~ 228 (251)
T PRK14249 151 GQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEEL-MQE-LKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYG 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeC
Confidence 999999999999999999999999999999999887765 433 3457899999999999876 8999999999999999
Q ss_pred CHHHHHh
Q 000511 812 SSADLAV 818 (1455)
Q Consensus 812 ~~~~l~~ 818 (1455)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14249 229 RTGEIFS 235 (251)
T ss_pred CHHHHHh
Confidence 9888743
No 475
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=325.77 Aligned_cols=202 Identities=26% Similarity=0.342 Sum_probs=166.4
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEcC-------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------- 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~------- 668 (1455)
.++++|+++.|.. . ++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~ 77 (251)
T PRK14251 4 IISAKDVHLSYGN---Y---EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSK 77 (251)
T ss_pred eEEEEeeEEEECC---e---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEccccc
Confidence 4789999999853 2 35999999999999999999999999999999999986 4799998765
Q ss_pred --------cEEEEcCCCCCCCcCHHHHhccCCC---C-CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000511 669 --------SIAYVPQVPWILSGTIRDNILFGKN---Y-DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 669 --------~i~y~~Q~p~l~~~ti~~nI~~g~~---~-~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSG 732 (1455)
.++|++|+|.+++.|++||+.++.. . ++ ++..++++.+++..+.. ...+....+|||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 150 (251)
T PRK14251 78 MDLVELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETK-------DNLDRNAQAFSG 150 (251)
T ss_pred chHHHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchH-------HHhccChhhCCH
Confidence 3899999999999999999987532 1 12 23445555555532111 123456789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEec
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1455)
|||||++||||++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 151 Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~ 228 (251)
T PRK14251 151 GQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEET-LME-LKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAG 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHH-HHH-HHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999998888776 433 3446899999999999765 9999999999999999
Q ss_pred CHHHHH
Q 000511 812 SSADLA 817 (1455)
Q Consensus 812 ~~~~l~ 817 (1455)
+.+++.
T Consensus 229 ~~~~~~ 234 (251)
T PRK14251 229 PTEEMF 234 (251)
T ss_pred CHHHHH
Confidence 988874
No 476
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-34 Score=325.83 Aligned_cols=203 Identities=25% Similarity=0.350 Sum_probs=166.7
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEcC------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------ 668 (1455)
..++++|+++.|.. . ++|+|+||+|++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 11 ~~l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~ 84 (258)
T PRK14268 11 PQIKVENLNLWYGE---K---QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEP 84 (258)
T ss_pred eeEEEeeeEEEeCC---e---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccc
Confidence 46899999998852 2 359999999999999999999999999999999999875 799998754
Q ss_pred ---------cEEEEcCCCCCCCcCHHHHhccCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000511 669 ---------SIAYVPQVPWILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 669 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSG 732 (1455)
.++|++|++.+++.|++||+.++.. .+.+ +..++++.+++..++. ........+|||
T Consensus 85 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 157 (258)
T PRK14268 85 DVDVVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLSG 157 (258)
T ss_pred cchHHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCCH
Confidence 3899999999988999999987531 2222 2344555555532211 223456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEec
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1455)
||||||+||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 158 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~ 235 (258)
T PRK14268 158 GQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDL-IMN-LKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFG 235 (258)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHH-HHH-HhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988775 333 3357899999999998865 9999999999999999
Q ss_pred CHHHHH
Q 000511 812 SSADLA 817 (1455)
Q Consensus 812 ~~~~l~ 817 (1455)
+++++.
T Consensus 236 ~~~~~~ 241 (258)
T PRK14268 236 QTRQIF 241 (258)
T ss_pred CHHHHh
Confidence 998874
No 477
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5.3e-34 Score=319.26 Aligned_cols=193 Identities=26% Similarity=0.379 Sum_probs=157.0
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|++++|+... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~--~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (221)
T TIGR02211 2 LKCENLGKRYQEGK--LDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAK 79 (221)
T ss_pred EEEEeeeEEccCCC--cceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHH
Confidence 57889999986321 112369999999999999999999999999999999999999999998764
Q ss_pred ----cEEEEcCCCCCCC-cCHHHHhccCC---CCCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHH
Q 000511 669 ----SIAYVPQVPWILS-GTIRDNILFGK---NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 736 (1455)
Q Consensus 669 ----~i~y~~Q~p~l~~-~ti~~nI~~g~---~~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkq 736 (1455)
.++|++|+|.++. .|++||+.++. .++. ++..+.++.++++.. ......+|||||||
T Consensus 80 ~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~q 148 (221)
T TIGR02211 80 LRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHR-----------INHRPSELSGGERQ 148 (221)
T ss_pred HHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHH
Confidence 3899999998885 59999998742 1222 234455555555432 23445689999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccccCCEEEEEeCCeEE
Q 000511 737 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1455)
Q Consensus 737 RvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1455)
||+||||++.+|+++||||||++||+.+.+.+.+. +.... ..++|+|++||+++.+..+|+|++|++|+++
T Consensus 149 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 149 RVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDL-MLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999988776 33211 2378999999999998889999999999875
No 478
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.7e-34 Score=312.28 Aligned_cols=188 Identities=20% Similarity=0.291 Sum_probs=157.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChHHHhcccEE
Q 000511 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1455)
Q Consensus 1219 I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~ 1298 (1455)
++++|++++|++ +.++ ++||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ++.+++
T Consensus 2 l~~~~l~~~~~~--~~l~-~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~----~~~~~~ 74 (195)
T PRK13541 2 LSLHQLQFNIEQ--KNLF-DLSITFLPSAITYIKGANGCGKSSLLRMIAGIMQPSSGNIYYKNCNINNIA----KPYCTY 74 (195)
T ss_pred eEEEEeeEEECC--cEEE-EEEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCcccChhh----hhhEEe
Confidence 789999999953 3445 599999999999999999999999999999999999999999999986543 456999
Q ss_pred EeCCCCC-CCCcHHHhcCcCCCC--ChHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000511 1299 VPQSPFL-FEGSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1455)
Q Consensus 1299 VpQdp~l-f~gTIreNLdp~~~~--~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAlLr~~~IL 1375 (1455)
+||++.+ |..|+++|+.+.... .++++.++++.+ |++......+.+||+|||||++||||++++|+++
T Consensus 75 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~~rl~la~al~~~p~~l 145 (195)
T PRK13541 75 IGHNLGLKLEMTVFENLKFWSEIYNSAETLYAAIHYF---------KLHDLLDEKCYSLSSGMQKIVAIARLIACQSDLW 145 (195)
T ss_pred ccCCcCCCccCCHHHHHHHHHHhcccHHHHHHHHHHc---------CCHhhhccChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999754 678999999653211 233444445544 4444455566789999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhHhhhCEEE
Q 000511 1376 CLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEIL 1422 (1455)
Q Consensus 1376 lLDEaTS~lD~~te~~I~~~i~~~-~~~~TvI~IaHrl~ti~~~DrI~ 1422 (1455)
+|||||++||+.+.+.+.+.|++. .+++|+|+|||+++.+..+|-|.
T Consensus 146 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~ 193 (195)
T PRK13541 146 LLDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLESSIKSAQILQ 193 (195)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCccccchhheec
Confidence 999999999999999999999753 35899999999999999999763
No 479
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-34 Score=324.36 Aligned_cols=203 Identities=24% Similarity=0.310 Sum_probs=168.7
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEcC-------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 668 (1455)
-++++|+++.|.. . .+|+|+||++++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~ 77 (251)
T PRK14270 4 KMESKNLNLWYGE---K---QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKD 77 (251)
T ss_pred EEEEEEeEEEECC---e---eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEeccccc
Confidence 4788999999852 2 259999999999999999999999999999999999875 799998864
Q ss_pred --------cEEEEcCCCCCCCcCHHHHhccCCCC----CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000511 669 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 669 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSG 732 (1455)
.++|++|++.+++.|++||+.|+... ++ ++..++++.+++..++.. ..+.....|||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 150 (251)
T PRK14270 78 VDVVELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSG 150 (251)
T ss_pred ccHHHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCH
Confidence 38999999999999999999875321 22 234566677766443321 23456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEec
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1455)
|||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 151 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-L~~-~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (251)
T PRK14270 151 GQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDL-MVE-LKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFN 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeC
Confidence 999999999999999999999999999999999988775 433 3346899999999998765 9999999999999999
Q ss_pred CHHHHHh
Q 000511 812 SSADLAV 818 (1455)
Q Consensus 812 ~~~~l~~ 818 (1455)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14270 229 KTEKIFL 235 (251)
T ss_pred CHHHHhc
Confidence 9888743
No 480
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=6.6e-34 Score=318.92 Aligned_cols=198 Identities=23% Similarity=0.336 Sum_probs=162.1
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|+++.|.. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~i~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~ 79 (225)
T PRK10247 6 PLLQLQNVGYLAGD------AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIY 79 (225)
T ss_pred ceEEEeccEEeeCC------ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHH
Confidence 46899999999852 2359999999999999999999999999999999999999999998876
Q ss_pred --cEEEEcCCCCCCCcCHHHHhccCCC-----CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHH
Q 000511 669 --SIAYVPQVPWILSGTIRDNILFGKN-----YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1455)
Q Consensus 669 --~i~y~~Q~p~l~~~ti~~nI~~g~~-----~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 741 (1455)
.++|++|+|.+++.|++||+.++.. .++++..+.++.+++.. +.......+|||||||||+||
T Consensus 80 ~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~la 149 (225)
T PRK10247 80 RQQVSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLI 149 (225)
T ss_pred HhccEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHH
Confidence 4899999999998999999986421 12233445555555532 223556779999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCccccccCCEEEEEe-CCeEEEecCHH
Q 000511 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMD-KGQVKWIGSSA 814 (1455)
Q Consensus 742 Raly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~-~G~i~~~g~~~ 814 (1455)
||++++|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+.+.++.||++++|+ ++..+++|+|+
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 150 RNLQFMPKVLLLDEITSALDESNKHNVNEI-IHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999998877765 33211 23789999999999998899999995 56666777764
No 481
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-34 Score=324.65 Aligned_cols=203 Identities=28% Similarity=0.356 Sum_probs=165.7
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCc--cC---CCcEEEEcC-------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM--ML---THGSIHASG------- 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~--~~---~~G~i~~~~------- 668 (1455)
.++++|++++|.. . ++|+|+||++++||+++|+||||||||||+++|+|.. +| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~---~---~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~ 78 (252)
T PRK14239 5 ILQVSDLSVYYNK---K---KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPR 78 (252)
T ss_pred eEEEEeeEEEECC---e---eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcc
Confidence 4789999999853 2 3599999999999999999999999999999999985 36 589998764
Q ss_pred --------cEEEEcCCCCCCCcCHHHHhccCCC---C-CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000511 669 --------SIAYVPQVPWILSGTIRDNILFGKN---Y-DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 669 --------~i~y~~Q~p~l~~~ti~~nI~~g~~---~-~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSG 732 (1455)
.++|++|+|.+++.|++||+.++.. . ++ ++..++++.+++...+. +..+....+|||
T Consensus 79 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 151 (252)
T PRK14239 79 TDTVDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSG 151 (252)
T ss_pred cchHhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCH
Confidence 3899999999999999999986521 1 12 22333455555533222 234566779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEec
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 811 (1455)
|||||++||||+..+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 152 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 229 (252)
T PRK14239 152 GQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEET-LLG-LKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYN 229 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHH-HHH-HhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988875 433 334689999999999875 59999999999999999
Q ss_pred CHHHHHh
Q 000511 812 SSADLAV 818 (1455)
Q Consensus 812 ~~~~l~~ 818 (1455)
+.+++..
T Consensus 230 ~~~~~~~ 236 (252)
T PRK14239 230 DTKQMFM 236 (252)
T ss_pred CHHHHHh
Confidence 9888753
No 482
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.1e-34 Score=322.25 Aligned_cols=199 Identities=26% Similarity=0.355 Sum_probs=163.8
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|+++.|+. . .+|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~---~---~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 75 (240)
T PRK09493 2 IEFKNVSKHFGP---T---QVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLI 75 (240)
T ss_pred EEEEeEEEEECC---e---EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHH
Confidence 578899998852 2 359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCC-cCHHHHhccCC----CCCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 --SIAYVPQVPWILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 --~i~y~~Q~p~l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
.++|++|++.++. .|++||+.++. ..+. ++..++++..+++.. .......||||||||
T Consensus 76 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qr 144 (240)
T PRK09493 76 RQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAER-----------AHHYPSELSGGQQQR 144 (240)
T ss_pred hhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHH-----------HhcChhhcCHHHHHH
Confidence 3899999998875 59999998753 1222 233444554444322 234557899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1455)
++||||++.+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 145 v~la~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (240)
T PRK09493 145 VAIARALAVKPKLMLFDEPTSALDPELRHEVLKV-MQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVL 223 (240)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHH
Confidence 9999999999999999999999999999888775 33312347899999999999865 999999999999999998876
Q ss_pred Hh
Q 000511 817 AV 818 (1455)
Q Consensus 817 ~~ 818 (1455)
..
T Consensus 224 ~~ 225 (240)
T PRK09493 224 IK 225 (240)
T ss_pred hc
Confidence 43
No 483
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-34 Score=330.83 Aligned_cols=207 Identities=29% Similarity=0.405 Sum_probs=164.4
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|+++.|+.... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~-~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 5 KDIILDNVSYTYAKKTP-FEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred ceEEEEEEEEEeCCCCc-cccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 35889999999964210 112369999999999999999999999999999999999999999998754
Q ss_pred -------cEEEEcCCCC--CCCcCHHHHhccCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000511 669 -------SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 669 -------~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSG 732 (1455)
.|+|++|+|+ +++.|++|||.|+.. .+.+ +..+.++..++..+ ..+....+|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~----------~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPED----------YVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhcCChhhCCH
Confidence 3899999984 667899999987632 2221 12233333333211 12456679999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccc-cCCEEEEEeCCeEEEe
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWI 810 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~ 810 (1455)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||+|++|++|++++.
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~ 232 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINL-FERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI 232 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999888765 332112 3789999999999875 5999999999999999
Q ss_pred cCHHHHHh
Q 000511 811 GSSADLAV 818 (1455)
Q Consensus 811 g~~~~l~~ 818 (1455)
|+++++..
T Consensus 233 g~~~~~~~ 240 (289)
T PRK13645 233 GSPFEIFS 240 (289)
T ss_pred CCHHHHhc
Confidence 99888753
No 484
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-33 Score=334.82 Aligned_cols=210 Identities=28% Similarity=0.388 Sum_probs=175.9
Q ss_pred cEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCChHHHHHHHHhcCCCCCCceEEECCEeCCCCChH-HHhccc
Q 000511 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR-DLRGRF 1296 (1455)
Q Consensus 1218 ~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrtGSGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~~~-~lR~~i 1296 (1455)
.++++|++.+|++- ++|+||||++.|||..|++|.||||||||++.|.|.|+|++|+|.+||....-.++. ..+.-|
T Consensus 8 ll~~~~i~K~FggV--~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI 85 (500)
T COG1129 8 LLELRGISKSFGGV--KALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGI 85 (500)
T ss_pred eeeeecceEEcCCc--eeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCc
Confidence 58999999999754 699999999999999999999999999999999999999999999999999865555 455679
Q ss_pred EEEeCCCCCCCC-cHHHhcCcCCCCC-------hHHHHHHHHHhcHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000511 1297 AVVPQSPFLFEG-SLRDNLDPFHMND-------DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1455)
Q Consensus 1297 ~~VpQdp~lf~g-TIreNLdp~~~~~-------d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAl 1368 (1455)
++|.||+.|++. ||.|||-.+++.. ..++.+.. .+.++.+|++......-.+||.||||.+.||||+
T Consensus 86 ~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A-----~~~l~~lg~~~~~~~~v~~LsiaqrQ~VeIArAl 160 (500)
T COG1129 86 ATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRA-----RELLARLGLDIDPDTLVGDLSIAQRQMVEIARAL 160 (500)
T ss_pred EEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHH-----HHHHHHcCCCCChhhhhhhCCHHHHHHHHHHHHH
Confidence 999999999976 9999996554432 22322221 2334445442223333347999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-hCEEEEEeCCeEEEeCC
Q 000511 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1434 (1455)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~te~~I~~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1434 (1455)
..+++|||||||||+|+..-.+.+.+.|++.. +|.++|+||||++.+.. ||||.||.||+++..++
T Consensus 161 ~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 161 SFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecc
Confidence 99999999999999999998888889998875 69999999999999976 99999999999988766
No 485
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-34 Score=317.11 Aligned_cols=191 Identities=23% Similarity=0.390 Sum_probs=157.4
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC---------cEEEE
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------SIAYV 673 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------~i~y~ 673 (1455)
+++|+++.|.. . .+++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 2 ~~~~l~~~~~~---~---~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~ 75 (210)
T cd03269 2 EVENVTKRFGR---V---TALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYL 75 (210)
T ss_pred EEEEEEEEECC---E---EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEe
Confidence 57888888852 2 359999999999999999999999999999999999999999999876 49999
Q ss_pred cCCCCCCCc-CHHHHhccCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHc
Q 000511 674 PQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 745 (1455)
Q Consensus 674 ~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly 745 (1455)
+|++.++.+ |++||+.+... .+ +++..+.++..+++.. ......+||||||||++||||++
T Consensus 76 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~al~ 144 (210)
T cd03269 76 PEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEY-----------ANKRVEELSKGNQQKVQFIAAVI 144 (210)
T ss_pred ccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHH-----------HhCcHhhCCHHHHHHHHHHHHHh
Confidence 999988875 99999976421 11 2234455555555432 23456789999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEec
Q 000511 746 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 746 ~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1455)
.+|+++||||||++||+.+.+++.+. +.....+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 145 ~~p~~lllDEP~~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 145 HDPELLILDEPFSGLDPVNVELLKDV-IRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999988876 33312347899999999998865 9999999999998653
No 486
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-34 Score=329.92 Aligned_cols=206 Identities=25% Similarity=0.393 Sum_probs=166.0
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|++++|+.... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~~-~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (280)
T PRK13649 2 GINLQNVSYTYQAGTP-FEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDI 80 (280)
T ss_pred eEEEEEEEEEcCCCCc-cccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCH
Confidence 3688999999864211 012469999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCC--CCCCcCHHHHhccCCC---CCHHH----HHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000511 669 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDPQS----YSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1455)
Q Consensus 669 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~~----~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQ 734 (1455)
.|+|++|+| .+++.|++|||.++.. .+.+. .+++++..++..+ .......+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~ 150 (280)
T PRK13649 81 KQIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQ 150 (280)
T ss_pred HHHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHH
Confidence 389999998 5788899999987532 22222 2344444444321 1244567899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEecCH
Q 000511 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 813 (1455)
Q Consensus 735 kqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~ 813 (1455)
|||++||||++.+|+++||||||++||+.+.+.+.+. +......++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 151 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (280)
T PRK13649 151 MRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTL-FKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKP 229 (280)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999998888776 33212247899999999998864 999999999999999998
Q ss_pred HHHHh
Q 000511 814 ADLAV 818 (1455)
Q Consensus 814 ~~l~~ 818 (1455)
+++..
T Consensus 230 ~~~~~ 234 (280)
T PRK13649 230 KDIFQ 234 (280)
T ss_pred HHHhc
Confidence 88754
No 487
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=325.01 Aligned_cols=201 Identities=26% Similarity=0.348 Sum_probs=166.3
Q ss_pred CceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC----------
Q 000511 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1455)
Q Consensus 599 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 668 (1455)
+..++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 9 ~~~l~i~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~ 82 (265)
T PRK10575 9 DTTFALRNVSFRVPG---R---TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKA 82 (265)
T ss_pred CceEEEeeEEEEECC---E---EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHH
Confidence 346899999999852 2 359999999999999999999999999999999999999999999876
Q ss_pred ---cEEEEcCCCCCCCc-CHHHHhccCCC--------C---CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000511 669 ---SIAYVPQVPWILSG-TIRDNILFGKN--------Y---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1455)
Q Consensus 669 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~--------~---~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGG 733 (1455)
.++|++|++-++.+ |++||+.++.. . ++++..+.++.++++..+. ....+||||
T Consensus 83 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG 151 (265)
T PRK10575 83 FARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAH-----------RLVDSLSGG 151 (265)
T ss_pred HhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-----------CCcccCCHH
Confidence 38999999876654 99999987521 1 1234556667776654333 234589999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccc-cCCEEEEEeCCeEEEec
Q 000511 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 734 QkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 811 (1455)
||||++||||+..+|+++||||||++||+.+.+.+.+. +..... .+.|+|++||+++.+. .||+|++|++|++++.|
T Consensus 152 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~-l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~ 230 (265)
T PRK10575 152 ERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLAL-VHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQG 230 (265)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEec
Confidence 99999999999999999999999999999998887775 332112 3789999999999986 59999999999999999
Q ss_pred CHHHHH
Q 000511 812 SSADLA 817 (1455)
Q Consensus 812 ~~~~l~ 817 (1455)
+.+++.
T Consensus 231 ~~~~~~ 236 (265)
T PRK10575 231 TPAELM 236 (265)
T ss_pred CHHHhc
Confidence 988764
No 488
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=322.66 Aligned_cols=202 Identities=26% Similarity=0.353 Sum_probs=166.2
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEcC-------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 668 (1455)
.++++|+++.|.. . ++++|+||++++||+++|+||||||||||+++|+|..++ ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14240 3 KISVKDLDLFYGD---F---QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSD 76 (250)
T ss_pred eEEEEEEEEEECC---c---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 4789999999853 2 359999999999999999999999999999999998763 689998764
Q ss_pred --------cEEEEcCCCCCCCcCHHHHhccCCCC----C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCcccc
Q 000511 669 --------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1455)
Q Consensus 669 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSG 732 (1455)
.++|++|+|.+++.|++||+.++... + +++..++++.+++..++. ...+..+.+|||
T Consensus 77 ~~~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 149 (250)
T PRK14240 77 IDVNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSG 149 (250)
T ss_pred cchHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCH
Confidence 38999999999889999999876321 1 123344555555543332 224556779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEec
Q 000511 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1455)
Q Consensus 733 GQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1455)
|||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 150 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (250)
T PRK14240 150 GQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEEL-IQE-LKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFG 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999887765 433 3457899999999998765 9999999999999999
Q ss_pred CHHHHH
Q 000511 812 SSADLA 817 (1455)
Q Consensus 812 ~~~~l~ 817 (1455)
+.+++.
T Consensus 228 ~~~~~~ 233 (250)
T PRK14240 228 DTVDLF 233 (250)
T ss_pred CHHHHH
Confidence 988874
No 489
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=323.67 Aligned_cols=204 Identities=25% Similarity=0.332 Sum_probs=169.0
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEcC------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------ 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~------ 668 (1455)
..++++|++++|.. . ++|+|+||++++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 9 ~~l~i~~v~~~~~~---~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 82 (264)
T PRK14243 9 TVLRTENLNVYYGS---F---LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAP 82 (264)
T ss_pred eEEEEeeeEEEECC---E---EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEcccc
Confidence 46899999999853 2 35999999999999999999999999999999999876 4799998765
Q ss_pred ---------cEEEEcCCCCCCCcCHHHHhccCCCC---C---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccH
Q 000511 669 ---------SIAYVPQVPWILSGTIRDNILFGKNY---D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1455)
Q Consensus 669 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~~---~---~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGG 733 (1455)
.++|++|+|.+++.|++|||.++... . +++..++++.+++..++.. ..+..+.+||||
T Consensus 83 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgG 155 (264)
T PRK14243 83 DVDPVEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGG 155 (264)
T ss_pred ccChHHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHH
Confidence 38999999999988999999876421 1 2334455666666544431 235567799999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEe---------
Q 000511 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMD--------- 803 (1455)
Q Consensus 734 QkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~--------- 803 (1455)
||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||+|++|+
T Consensus 156 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~ 233 (264)
T PRK14243 156 QQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEEL-MHE-LKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGR 233 (264)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEecCHHHHHHhCCEEEEEeccccccccc
Confidence 99999999999999999999999999999999988775 333 3446899999999998765 99999998
Q ss_pred CCeEEEecCHHHHHh
Q 000511 804 KGQVKWIGSSADLAV 818 (1455)
Q Consensus 804 ~G~i~~~g~~~~l~~ 818 (1455)
+|++++.|+.+++..
T Consensus 234 ~g~i~~~~~~~~~~~ 248 (264)
T PRK14243 234 YGYLVEFDRTEKIFN 248 (264)
T ss_pred CceEEEeCCHHHHHh
Confidence 799999999988854
No 490
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.6e-34 Score=322.06 Aligned_cols=197 Identities=21% Similarity=0.312 Sum_probs=164.0
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
++++|+++.|+. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 i~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (242)
T TIGR03411 3 LYLEGLSVSFDG---F---KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIAR 76 (242)
T ss_pred EEEEeeEEEcCC---e---EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHh
Confidence 678999998852 1 359999999999999999999999999999999999999999998865
Q ss_pred -cEEEEcCCCCCCCc-CHHHHhccCCCCC---------------HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000511 669 -SIAYVPQVPWILSG-TIRDNILFGKNYD---------------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~~-ti~~nI~~g~~~~---------------~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LS 731 (1455)
.++|++|++.++++ |++||+.++...+ +++..+.++..+++ ........+||
T Consensus 77 ~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS 145 (242)
T TIGR03411 77 AGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLA-----------DEADRLAGLLS 145 (242)
T ss_pred cCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCC
Confidence 38999999999886 9999998753211 12233334433332 22345667899
Q ss_pred cHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEeCCeEEEe
Q 000511 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1455)
Q Consensus 732 GGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1455)
||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.++. ||+|++|++|++++.
T Consensus 146 ~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~ 223 (242)
T TIGR03411 146 HGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAEL-LKS-LAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAE 223 (242)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHH-HHH-HhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEee
Confidence 9999999999999999999999999999999999988775 333 3346899999999999875 999999999999999
Q ss_pred cCHHHHH
Q 000511 811 GSSADLA 817 (1455)
Q Consensus 811 g~~~~l~ 817 (1455)
|+++++.
T Consensus 224 ~~~~~~~ 230 (242)
T TIGR03411 224 GSLDQVQ 230 (242)
T ss_pred CCHHHHh
Confidence 9988764
No 491
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.5e-34 Score=338.57 Aligned_cols=188 Identities=26% Similarity=0.393 Sum_probs=157.9
Q ss_pred ccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC---------------------cEEEEcCCCCC
Q 000511 621 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------------------SIAYVPQVPWI 679 (1455)
Q Consensus 621 ~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------------------~i~y~~Q~p~l 679 (1455)
.+|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.++| .++||+|++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 359999999999999999999999999999999999999999998875 39999999999
Q ss_pred CC-cCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEE
Q 000511 680 LS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIY 751 (1455)
Q Consensus 680 ~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~il 751 (1455)
++ .|++|||.++.. .++ ++..++++..+|.... .....+|||||||||+|||||+.+|+|+
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~-----------~~~~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWA-----------DKKPGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 87 699999998642 222 2345566666665432 2344589999999999999999999999
Q ss_pred EEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHHHhc
Q 000511 752 MLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 819 (1455)
Q Consensus 752 llDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1455)
|||||||+||+.+.+.+.+.+..-....++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 9999999999999998887633211123789999999999864 5999999999999999999998643
No 492
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-34 Score=301.28 Aligned_cols=205 Identities=26% Similarity=0.397 Sum_probs=167.5
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-------------
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 668 (1455)
.+++|++..|.. ..+|+++||++++||+++++|+||+||||||++|.|..++.+|+|..+|
T Consensus 4 L~v~~l~~~YG~------~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r 77 (237)
T COG0410 4 LEVENLSAGYGK------IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERAR 77 (237)
T ss_pred eeEEeEeecccc------eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHh
Confidence 567788877753 2359999999999999999999999999999999999999999999987
Q ss_pred -cEEEEcCCCCCCCc-CHHHHhccCCCCCHH-HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHc
Q 000511 669 -SIAYVPQVPWILSG-TIRDNILFGKNYDPQ-SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 745 (1455)
Q Consensus 669 -~i~y~~Q~p~l~~~-ti~~nI~~g~~~~~~-~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly 745 (1455)
.|+||||.-.+|.. ||+||+..|....+. ...+. .++.-.+.+|. .......++.+|||||||-+|+||||.
T Consensus 78 ~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~e~v~~lFP~-Lker~~~~aG~LSGGEQQMLAiaRALm 152 (237)
T COG0410 78 LGIAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DLEEVYELFPR-LKERRNQRAGTLSGGEQQMLAIARALM 152 (237)
T ss_pred CCeEeCcccccchhhCcHHHHHhhhhhcccccccccc----cHHHHHHHChh-HHHHhcCcccCCChHHHHHHHHHHHHh
Confidence 59999999999975 999999987433221 11110 02222334443 223456788899999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-C-CceEEEEccCccc-cccCCEEEEEeCCeEEEecCHHHHHhc
Q 000511 746 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-L-QKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAVS 819 (1455)
Q Consensus 746 ~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~-~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1455)
++|++|+||||+.+|-|...+.|++. +.. +. + +.||++|.++..+ ++.||+.|+|++|+|+.+|+.+|+..+
T Consensus 153 ~~PklLLLDEPs~GLaP~iv~~I~~~-i~~-l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 153 SRPKLLLLDEPSEGLAPKIVEEIFEA-IKE-LRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred cCCCEEEecCCccCcCHHHHHHHHHH-HHH-HHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 99999999999999999999999987 333 22 2 5699999999987 556999999999999999999998653
No 493
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=326.31 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=167.2
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|++++|+.. ..+|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 77 (277)
T PRK13652 3 LIETRDLCYSYSGS-----KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVR 77 (277)
T ss_pred eEEEEEEEEEeCCC-----CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHH
Confidence 36789999999532 1359999999999999999999999999999999999999999999865
Q ss_pred -cEEEEcCCCC--CCCcCHHHHhccCC---CCCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000511 669 -SIAYVPQVPW--ILSGTIRDNILFGK---NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1455)
Q Consensus 669 -~i~y~~Q~p~--l~~~ti~~nI~~g~---~~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 738 (1455)
.++||+|+|. +++.|++||+.++. .++++ +.++.++.+++...+. .....||||||||+
T Consensus 78 ~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qrl 146 (277)
T PRK13652 78 KFVGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRD-----------RVPHHLSGGEKKRV 146 (277)
T ss_pred hheEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHHHHHH
Confidence 3899999983 67789999998753 23432 3456666666654333 34458999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccc-cCCEEEEEeCCeEEEecCHHHH
Q 000511 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 739 alARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l 816 (1455)
+||||++.+|+++||||||++||+.+.+.+.+. +..... ++.|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 147 ~laraL~~~p~llilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~ 225 (277)
T PRK13652 147 AIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDF-LNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEI 225 (277)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999998888775 332122 3789999999999985 5999999999999999999988
Q ss_pred Hh
Q 000511 817 AV 818 (1455)
Q Consensus 817 ~~ 818 (1455)
..
T Consensus 226 ~~ 227 (277)
T PRK13652 226 FL 227 (277)
T ss_pred hc
Confidence 54
No 494
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=8.8e-34 Score=302.04 Aligned_cols=161 Identities=25% Similarity=0.393 Sum_probs=144.1
Q ss_pred EEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--cEEEEcCCCCC
Q 000511 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWI 679 (1455)
Q Consensus 602 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~p~l 679 (1455)
++++|+++.|+.. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.+++ .++|++|+|++
T Consensus 1 i~~~~~~~~~~~~-----~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~ 75 (166)
T cd03223 1 IELENLSLATPDG-----RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYL 75 (166)
T ss_pred CEEEEEEEEcCCC-----CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCcc
Confidence 3578999998532 2359999999999999999999999999999999999999999999986 79999999999
Q ss_pred CCcCHHHHhccCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHHHccCCCEEEEcCCccc
Q 000511 680 LSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSA 759 (1455)
Q Consensus 680 ~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illlDep~s~ 759 (1455)
++.|++||+.++ ....||||||||++||||++++|++++|||||++
T Consensus 76 ~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~ 121 (166)
T cd03223 76 PLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSA 121 (166)
T ss_pred ccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccc
Confidence 989999999864 2358999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHhhcCcccCCceEEEEccCccccccCCEEEEEeCC
Q 000511 760 VDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 805 (1455)
Q Consensus 760 lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G 805 (1455)
||+.+.+.+.+. +.. . ++|+|++||+.+....||++++|++|
T Consensus 122 LD~~~~~~l~~~-l~~-~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 122 LDEESEDRLYQL-LKE-L--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred cCHHHHHHHHHH-HHH-h--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 999999988876 332 2 58999999999988789999999875
No 495
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=9.4e-34 Score=324.38 Aligned_cols=202 Identities=25% Similarity=0.313 Sum_probs=165.8
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|+++.|+. . .+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~~l~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~ 77 (257)
T PRK10619 4 NKLNVIDLHKRYGE---H---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDG 77 (257)
T ss_pred ccEEEeeeEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccc
Confidence 45899999999852 2 359999999999999999999999999999999999999999998765
Q ss_pred ---------------cEEEEcCCCCCCCc-CHHHHhccCC----CCCH----HHHHHHHHHhcchHHHhhccCCCccccc
Q 000511 669 ---------------SIAYVPQVPWILSG-TIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIG 724 (1455)
Q Consensus 669 ---------------~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig 724 (1455)
.++|++|+|.++.. |++||+.++. ..++ ++..+.++..++...+ .+
T Consensus 78 ~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~ 147 (257)
T PRK10619 78 QLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QG 147 (257)
T ss_pred ccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hh
Confidence 38999999998875 9999997642 1222 2333444444443221 13
Q ss_pred CCCCccccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcccccc-CCEEEEEe
Q 000511 725 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMD 803 (1455)
Q Consensus 725 ~~g~~LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~ 803 (1455)
....+||||||||++||||++++|+++||||||++||+.+.+.+.+. +......++|+|++||+++.+.. ||+|++|+
T Consensus 148 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~ 226 (257)
T PRK10619 148 KYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRI-MQQLAEEGKTMVVVTHEMGFARHVSSHVIFLH 226 (257)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEE
Confidence 45678999999999999999999999999999999999999988875 33312347899999999999885 99999999
Q ss_pred CCeEEEecCHHHHHh
Q 000511 804 KGQVKWIGSSADLAV 818 (1455)
Q Consensus 804 ~G~i~~~g~~~~l~~ 818 (1455)
+|++++.|+++++..
T Consensus 227 ~G~i~~~~~~~~~~~ 241 (257)
T PRK10619 227 QGKIEEEGAPEQLFG 241 (257)
T ss_pred CCEEEEeCCHHHhhh
Confidence 999999999888743
No 496
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=326.58 Aligned_cols=203 Identities=26% Similarity=0.347 Sum_probs=168.2
Q ss_pred eEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC------------
Q 000511 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1455)
Q Consensus 601 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 668 (1455)
.++++|++++|+.... .++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~---~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 80 (277)
T PRK13642 4 ILEVENLVFKYEKESD---VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLR 80 (277)
T ss_pred eEEEEEEEEEcCCCCc---CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHh
Confidence 4789999999964211 2359999999999999999999999999999999999999999999875
Q ss_pred -cEEEEcCCCC--CCCcCHHHHhccCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHH
Q 000511 669 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1455)
Q Consensus 669 -~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 738 (1455)
.++|++|+|. +++.|+.|||.++.. ..+ ++++++++.+++.... ......||||||||+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv 149 (277)
T PRK13642 81 RKIGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFK-----------TREPARLSGGQKQRV 149 (277)
T ss_pred cceEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHHH
Confidence 3899999984 667899999987521 222 2345566666664322 234568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHHH
Q 000511 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 817 (1455)
Q Consensus 739 alARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 817 (1455)
+||||++.+|+++||||||++||+.+.+.+.+. +..... .+.|+|++||+++.+..||+|++|++|++++.|+++++.
T Consensus 150 ~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (277)
T PRK13642 150 AVAGIIALRPEIIILDESTSMLDPTGRQEIMRV-IHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELF 228 (277)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999988775 332122 278999999999998889999999999999999998875
Q ss_pred h
Q 000511 818 V 818 (1455)
Q Consensus 818 ~ 818 (1455)
.
T Consensus 229 ~ 229 (277)
T PRK13642 229 A 229 (277)
T ss_pred c
Confidence 4
No 497
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=325.98 Aligned_cols=205 Identities=26% Similarity=0.367 Sum_probs=168.9
Q ss_pred CCceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEcC----
Q 000511 598 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG---- 668 (1455)
Q Consensus 598 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~---- 668 (1455)
....++++|+++.|.. . .+|+|+||++++||+++|+|+||||||||+++|+|.+++ ++|+|.++|
T Consensus 22 ~~~~l~~~nl~~~~~~---~---~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~ 95 (272)
T PRK14236 22 EQTALEVRNLNLFYGD---K---QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIY 95 (272)
T ss_pred CCcEEEEEEEEEEECC---e---eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECc
Confidence 3456899999999952 2 359999999999999999999999999999999999874 899998754
Q ss_pred -----------cEEEEcCCCCCCCcCHHHHhccCCC---C-CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000511 669 -----------SIAYVPQVPWILSGTIRDNILFGKN---Y-DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 729 (1455)
Q Consensus 669 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~---~-~~----~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~ 729 (1455)
.++|++|++.+++.|++||+.++.. . .+ ++..++++..++..++. +..+..+.+
T Consensus 96 ~~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 168 (272)
T PRK14236 96 DKKVDVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFG 168 (272)
T ss_pred ccccCHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCccc
Confidence 4899999999998899999987532 1 11 23444555555544332 234667889
Q ss_pred cccHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCccccc-cCCEEEEEeCCeEE
Q 000511 730 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVK 808 (1455)
Q Consensus 730 LSGGQkqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~ 808 (1455)
|||||||||+||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|+++
T Consensus 169 LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-L~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~ 246 (272)
T PRK14236 169 LSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEEL-ITE-LKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLV 246 (272)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999998887775 433 334689999999999876 59999999999999
Q ss_pred EecCHHHHH
Q 000511 809 WIGSSADLA 817 (1455)
Q Consensus 809 ~~g~~~~l~ 817 (1455)
+.|+++++.
T Consensus 247 ~~g~~~~~~ 255 (272)
T PRK14236 247 EYGDTDTLF 255 (272)
T ss_pred ecCCHHHHh
Confidence 999988874
No 498
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.3e-33 Score=317.68 Aligned_cols=197 Identities=25% Similarity=0.298 Sum_probs=161.0
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|++++|..... ..++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~~~~--~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~ 82 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEH--ELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEAR 82 (228)
T ss_pred ceEEEeeeEEEccCCCc--ceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHH
Confidence 35889999999864211 01359999999999999999999999999999999999999999998764
Q ss_pred ------cEEEEcCCCCCCCc-CHHHHhccCC---CCC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHH
Q 000511 669 ------SIAYVPQVPWILSG-TIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1455)
Q Consensus 669 ------~i~y~~Q~p~l~~~-ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQ 734 (1455)
.++|++|+|.++.. |++||+.++. ..+ +++..+.++.+++...++ ....+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Ge 151 (228)
T PRK10584 83 AKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLD-----------HLPAQLSGGE 151 (228)
T ss_pred HHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHH
Confidence 38999999988875 9999998642 112 234566677777654433 2345899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccccCCEEEEEeCCeEEEe
Q 000511 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWI 810 (1455)
Q Consensus 735 kqRvalARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~ 810 (1455)
|||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+..||++++|++|+++++
T Consensus 152 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 152 QQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADL-LFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999998888776 332112 37899999999999888999999999998753
No 499
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.6e-34 Score=319.52 Aligned_cols=197 Identities=28% Similarity=0.424 Sum_probs=161.7
Q ss_pred EEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC--------------
Q 000511 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1455)
Q Consensus 603 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 668 (1455)
+++|+++.|+. . ++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (230)
T TIGR03410 2 EVSNLNVYYGQ---S---HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARA 75 (230)
T ss_pred EEEeEEEEeCC---e---EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHh
Confidence 57889998853 2 359999999999999999999999999999999999999999998865
Q ss_pred cEEEEcCCCCCCCc-CHHHHhccCCC-CC---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHHHHHHHH
Q 000511 669 SIAYVPQVPWILSG-TIRDNILFGKN-YD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 743 (1455)
Q Consensus 669 ~i~y~~Q~p~l~~~-ti~~nI~~g~~-~~---~~~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARa 743 (1455)
.++|++|++.++.. |++||+.++.. .. .+.+.++++..+. ..........+||||||||++||||
T Consensus 76 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~la~a 145 (230)
T TIGR03410 76 GIAYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLAIARA 145 (230)
T ss_pred CeEEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHHHHHH
Confidence 38999999998876 99999987532 11 2233444443321 1122345667899999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcccccc-CCEEEEEeCCeEEEecCHHHH
Q 000511 744 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 744 ly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1455)
++.+|+++||||||++||+.+.+++.+. +..... .++|+|++||+++.+.. ||+|+++++|++++.|+.+++
T Consensus 146 l~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 146 LVTRPKLLLLDEPTEGIQPSIIKDIGRV-IRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999999988775 332122 37899999999999885 999999999999999998876
No 500
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=325.13 Aligned_cols=203 Identities=25% Similarity=0.381 Sum_probs=166.5
Q ss_pred ceEEEEcceEeecCCCcccccccceeceeEecCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEcC-----------
Q 000511 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1455)
Q Consensus 600 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 668 (1455)
..++++|+++.|.... .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~i~~l~~~~~~~~----~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~ 81 (269)
T PRK13648 6 SIIVFKNVSFQYQSDA----SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKL 81 (269)
T ss_pred ceEEEEEEEEEcCCCC----CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHH
Confidence 3589999999996421 2359999999999999999999999999999999999999999999876
Q ss_pred --cEEEEcCCCC--CCCcCHHHHhccCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCccccHHHHH
Q 000511 669 --SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1455)
Q Consensus 669 --~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 737 (1455)
.++|++|+|+ +++.|+++|+.++.. .+.+ +..++++..++... ......+||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 150 (269)
T PRK13648 82 RKHIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLER-----------ADYEPNALSGGQKQR 150 (269)
T ss_pred HhheeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCCcccCCHHHHHH
Confidence 3899999996 456699999988632 2222 23344455554332 234566899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCccccccCCEEEEEeCCeEEEecCHHHH
Q 000511 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 816 (1455)
Q Consensus 738 valARaly~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l 816 (1455)
++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+..||+|++|++|++++.|+++++
T Consensus 151 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 229 (269)
T PRK13648 151 VAIAGVLALNPSVIILDEATSMLDPDARQNLLDL-VRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEI 229 (269)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988775 333122 37899999999998888999999999999999999887
Q ss_pred Hh
Q 000511 817 AV 818 (1455)
Q Consensus 817 ~~ 818 (1455)
..
T Consensus 230 ~~ 231 (269)
T PRK13648 230 FD 231 (269)
T ss_pred hc
Confidence 54
Done!