Query 000511
Match_columns 1455
No_of_seqs 455 out of 5620
Neff 7.8
Searched_HMMs 29240
Date Tue Mar 26 15:59:35 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000511.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_286-290//hhsearch_pdb/000511hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1607.7 108.4 1215 219-1454 2-1317(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1283.0 102.5 1156 274-1454 47-1271(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 758.6 62.1 513 936-1453 137-653 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 721.3 51.5 511 935-1453 108-625 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 689.8 55.5 561 884-1453 27-590 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 687.1 61.1 569 877-1453 6-578 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 668.6 56.5 561 885-1455 5-578 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 667.6 66.7 560 884-1453 15-579 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 664.7 69.1 560 884-1453 15-579 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 656.2 65.2 563 885-1453 10-583 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1607.70 Aligned_cols=1215 Identities=18% Similarity=0.202 Sum_probs=910.9
Q ss_pred HHCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC-------------CCCCCCHHHHHHHH-HHHHHHHHHHH
Q ss_conf 980014-9888889989999999158999999999983210-------------89984069999999-75969999999
Q 000511 219 MNRGVI-KQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSC-------------NCTNPSLVRAICCA-YGYPYICLGLL 283 (1455)
Q Consensus 219 ~~~g~~-~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~-------------~~~~~~l~~~l~~~-~~~~~~~~~~~ 283 (1455)
++.|.+ ++|+..|.+.+.|++..+...+.+++.|.....+ ..++.++ +.+|+. -++..++..+-
T Consensus 2 ~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 2 LRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSI-PQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp --CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCH-HHHTTTCCHHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCH-HHHHHCCCHHHHHHHHHH
T ss_conf 8773100687635445679501110000113454243554334310012232025687799-997315676789999999
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHCC--------C-------CC-CH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999---99999998336--------8-------87-24-----699999999999999999999999999
Q 000511 284 KVVNDSIGFAGPL---LLNKLIKFLQQ--------G-------SG-HL-----DGYVLAIALGLTSILKSFFDTQYSFHL 339 (1455)
Q Consensus 284 ~l~~~~~~~~~P~---ll~~li~~l~~--------~-------~~-~~-----~g~~l~~~l~~~~~~~~~~~~~~~~~~ 339 (1455)
-++..+.+.+.|+ ++.++++.+.+ . .. .. .-..++..++.+.++..++...+.+..
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999982499432477985599999996599999999-99999998999999999999988679999
Q 000511 340 SKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKFAFV 418 (1455)
Q Consensus 340 ~r~~~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nLms~D~~~i~~~~-~~~~~~w~~pi~i~i~~~lL~~~lG~a~l 418 (1455)
...+.|+-..+...+|+|.++++....++.++|+++|.++.|++++.+++ ..+..++..++.++.++.+++..-..-++
T Consensus 161 ~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~l 240 (1321)
T 4f4c_A 161 LYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLTL 240 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889899879984899999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999964699998181599999999999999999999999999
Q 000511 419 SGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDA 498 (1455)
Q Consensus 419 ~g~~v~~~~~~~~~~~~~~~~~~q~~~~~~~d~Rv~~~~e~L~~ik~IK~~~we~~~~~~i~~~R~~El~~~~~~~~~~~ 498 (1455)
+.++++.+..++..++++++.+.+++.++..+++.+.++|+++|||+||+|+||+.+.+++.+..++..+...+.....+
T Consensus 241 v~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1321)
T 4f4c_A 241 VMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLG 320 (1321)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999983999998214299999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 99999989879--9999999999881998777589999999999999999999999999999999999999718998862
Q 000511 499 WCVFFWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH 576 (1455)
Q Consensus 499 ~~~~~~~~~~~--~~~~~tf~~~~~~~~~L~~~~~Ft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~RI~~fL~~~e~~~ 576 (1455)
........... .+.+++++.+.+.++.++++.+|+.+.++..+..|+..++..++.+.++.+|++||.+||+.++..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 400 (1321)
T 4f4c_A 321 ISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVID 400 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999999599869999999999999999999899999999999999999999971785345
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCEECEEEECCCCEEEEECCCCCCHHHHHHHHHCC
Q ss_conf 44310299985457886678898449998126860478863336540000147419969999968998478999998648
Q 000511 577 ELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGE 656 (1455)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~L~~isl~i~~G~l~~IvG~vGsGKSTLL~allGe 656 (1455)
........+ ......|+++|++|+|+..++.|+ |+|+||++++|+.++||||+|||||||+++|+|+
T Consensus 401 ~~~~~~~~~----------~~~~g~I~~~nvsF~Y~~~~~~~v---L~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~ 467 (1321)
T 4f4c_A 401 SSSKAGRKD----------MKIKGDITVENVHFTYPSRPDVPI---LRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRY 467 (1321)
T ss_dssp CSSSCCCCC----------CCCCCCEEEEEEEECCSSSTTSCS---EEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTS
T ss_pred CCCCCCCCC----------CCCCCCEEEEEEEEECCCCCCCCE---EECEEEEECCCCEEEEEECCCCCHHHHHHHHCCC
T ss_conf 666556567----------788876799985540799998743---3331886228827899805898577888875456
Q ss_pred CCCCCCEEEECC-------------CEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCC
Q ss_conf 668870899709-------------1999848887888688888535999-99789999999823228784036997530
Q 000511 657 MMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAY 722 (1455)
Q Consensus 657 ~~~~~G~v~~~g-------------~iayv~Q~pwL~n~TIreNIlfg~~-~d~~~Y~~vi~ac~L~~Dl~~lp~GD~T~ 722 (1455)
+++.+|+|.++| +||||+|+|||+|+||||||+||.+ .+++++.++++.|++++|++.||+||+|+
T Consensus 468 ~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~ 547 (1321)
T 4f4c_A 468 YDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTL 547 (1321)
T ss_dssp SCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSE
T ss_pred CCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCE
T ss_conf 51644861579965011259998504666587533207861678864155220999999998756546887088888607
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEE
Q ss_conf 25797766608999999999881399988871785320199999999994218466896599982683101018989999
Q 000511 723 IGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVM 802 (1455)
Q Consensus 723 iGe~G~~LSGGQkqRIaLARAlY~~~~i~lLDD~~SaLD~~t~~~I~~~~i~g~ll~~kTvIlvTh~~~~l~~aD~Ii~l 802 (1455)
|||+|.+||||||||||||||+|++|+|++||||+||||+++++. +++++.+ ++++||+|++||+++.++.||+|++|
T Consensus 548 vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~-i~~~l~~-~~~~~T~iiiaHrls~i~~aD~Iivl 625 (1321)
T 4f4c_A 548 VGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGI-VQQALDK-AAKGRTTIIIAHRLSTIRNADLIISC 625 (1321)
T ss_dssp ESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHH-HHHHHHH-HHTTSEEEEECSCTTTTTTCSEEEEE
T ss_pred ECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH-HHHHHHH-HHCCCEEEEECCCHHHHHHCCEEEEE
T ss_conf 558988777778799999998725999899845544688789999-9999999-84798899973638789868989996
Q ss_pred ECCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHH--HH--HCCCC---CC----------HHHHHHHH----------
Q ss_conf 398699942977887400367655543210123332--21--00123---41----------13454210----------
Q 000511 803 DKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQK--QE--MRTNA---SS----------ANKQILLQ---------- 855 (1455)
Q Consensus 803 ~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~---~~----------~~~~~~~~---------- 855 (1455)
++|+|+++|+|+||++.++.+.++..........+. +. ..... .. ...+....
T Consensus 626 ~~G~ive~Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1321)
T 4f4c_A 626 KNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSI 705 (1321)
T ss_dssp ETTEEEEEECHHHHHTTTCHHHHHHHHHHHHHHHHHHHCC----------------------------------------
T ss_pred ECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 39965136899999985327999999622122223323344332232111222223422222221102211101321245
Q ss_pred ------CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf ------02346778404667789888507401577898863144-89999999999999999841344433210245787
Q 000511 856 ------EKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG-WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSS 928 (1455)
Q Consensus 856 ------~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~ 928 (1455)
+++.............++.++.+......++.|....+ |...++.++...+.........+|+..|.+.....
T Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 785 (1321)
T 4f4c_A 706 TNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGN 785 (1321)
T ss_dssp ----------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSC
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 67740257775315403899999999707863109999999877899999999999999999999999999999875179
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCHHHHHHHHHHHHHH
Q ss_conf --887650368999999999999999999999999999999999999999884486433246--7822699999702643
Q 000511 929 --QTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQ--TPGGRILNRFSSDLYM 1004 (1455)
Q Consensus 929 --~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~il~~p~~ff~~--~~~G~ilnRfs~D~~~ 1004 (1455)
.......+|.++|++++++..++.++..+++...+.+++.++|.+++++++++|++|||. +|+|+++|||++|++.
T Consensus 786 ~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~ 865 (1321)
T 4f4c_A 786 PADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPN 865 (1321)
T ss_dssp SSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHH
T ss_conf 34556678999999999999999999999999999999999999999988873499333216788848888502505999
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCH
Q ss_conf 10002699999999998777866469878789999999999999999999999999999999873051476798731464
Q 000511 1005 IDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGS 1084 (1455)
Q Consensus 1005 id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl 1084 (1455)
+|..++..+..++..++.+++.++++.+..|++.+++++++.++++...++.+..+.......++.++...++.|+++|+
T Consensus 866 i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi 945 (1321)
T 4f4c_A 866 LRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENV 945 (1321)
T ss_dssp HHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999865377770221378689999999988899999999999999999999999888988999999627
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 898752928999999999999999999999999999999999999999999999999-7505877777631999999999
Q 000511 1085 STIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV-IGSRGNLPATFSTPGLVGLALS 1163 (1455)
Q Consensus 1085 ~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~g~vgl~l~ 1163 (1455)
.+||+|++|+++.+++.+.++..++..+.....+.+.......+..+...++..... +...+ .....++.+...+.
T Consensus 946 ~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~---~~~~~~~~~~~~~~ 1022 (1321)
T 4f4c_A 946 RTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITD---PPTMQPMRVLRVMY 1022 (1321)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSS---SCSSCHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCHHHHHHHHH
T ss_conf 988861414889999999999999999999999999999999999999999998757887537---65421478999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-CCCEEEEEEE
Q ss_conf 999999999999999999999989999999740377211026789999999884189998999966998-8520223599
Q 000511 1164 YAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFT 1242 (1455)
Q Consensus 1164 ~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vL~~isl~ 1242 (1455)
+......++..+...+.+++..+.+++|+.++.+.++|... ...+++.||..|.|+|+||+|+|+++. .+||+|+||+
T Consensus 1023 ~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~-~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~ 1101 (1321)
T 4f4c_A 1023 AITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDS-LSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFS 1101 (1321)
T ss_dssp HHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCT-TCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEE
T ss_conf 99877889999999999999999999989998607665777-66778788888818999879857999988212451699
Q ss_pred EECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCC---CC
Q ss_conf 758929999889997199999998337889976699989738999958771463898077777777588842859---99
Q 000511 1243 IEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF---HM 1319 (1455)
Q Consensus 1243 I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIReNLdp~---~~ 1319 (1455)
|+|||+||||||||||||||+++|+|+|+|++|+|.|||+||+++++++||+++++|||||+||+|||||||..+ .+
T Consensus 1102 I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~ 1181 (1321)
T 4f4c_A 1102 VEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSS 1181 (1321)
T ss_dssp ECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTT
T ss_pred ECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCC
T ss_conf 88989999989999819999999956863899789999998654999999854599878997327239999745499999
Q ss_pred CCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 9927799999990099999968--99415416999999369999999998825998899856576989998999999999
Q 000511 1320 NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAIS 1397 (1455)
Q Consensus 1320 ~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G~~LS~GQrQll~LARAlL~~~~ILiLDEaTS~lD~~Te~~i~~~i~ 1397 (1455)
++|+++|+|+++++++++|+++ ||||.++|+|.+||||||||+|||||++|+|+|||||||||+||++||+.||++|+
T Consensus 1182 ~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~ 1261 (1321)
T 4f4c_A 1182 VTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALD 1261 (1321)
T ss_dssp SCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 99999999999829849997176789998238891569999999999999971799899968111578999999999999
Q ss_pred HHCCCCEEEEECCCHHHHHHHCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHC
Q ss_conf 825994799862681467410879899398598967945885029948999998508
Q 000511 1398 SECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1454 (1455)
Q Consensus 1398 ~~f~~~TvI~IaHRl~ti~~~D~I~vld~GrivE~g~p~eLl~~~~s~f~~l~~~~~ 1454 (1455)
+.+++||+|+||||++|+++||+|+|||+|||+|+|+|+||++++ |.|++||+.+.
T Consensus 1262 ~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~-g~y~~L~~~Q~ 1317 (1321)
T 4f4c_A 1262 RAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEK-GAYYKLTQKQM 1317 (1321)
T ss_dssp TTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC------------
T ss_pred HHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCC-CHHHHHHHHHH
T ss_conf 973999899960689999969999999898999988889998498-09999999998
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1283.01 Aligned_cols=1156 Identities=17% Similarity=0.205 Sum_probs=831.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C-------CC-----------C-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5969999999999999999999999999998336-8-------87-----------2-4699999999999999999999
Q 000511 274 GYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-G-------SG-----------H-LDGYVLAIALGLTSILKSFFDT 333 (1455)
Q Consensus 274 ~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~-~-------~~-----------~-~~g~~l~~~l~~~~~~~~~~~~ 333 (1455)
++.++...+..++..++....|+++..+++.+.. . .. . .....++..++.+.++..++.-
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1284)
T 3g5u_A 47 RLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAY 126 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999998613444332222221111100244688999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999998249943247798559999999659999999999-999998999999999999988
Q 000511 334 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYLLYTQ 412 (1455)
Q Consensus 334 ~~~~~~~r~~~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nLms~D~~~i~~~~~~-~~~~w~~pi~i~i~~~lL~~~ 412 (1455)
...+...+.+.++-..+...+|+|.++++.....+.+.|+++|.++.|++.+.+.... +..+....+.++.++.++..
T Consensus 127 ~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~- 205 (1284)
T 3g5u_A 127 IQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFT- 205 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 9999999999999999999999999869989975688778999999889999999999999999999999999999999-
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 679-9999999999999999999999999999999999999999999996469999818159999999999999999999
Q 000511 413 VKF-AFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLS 491 (1455)
Q Consensus 413 lG~-a~l~g~~v~~~~~~~~~~~~~~~~~~q~~~~~~~d~Rv~~~~e~L~~ik~IK~~~we~~~~~~i~~~R~~El~~~~ 491 (1455)
+.| .+++.++++.++..+..++.+.+.+..++..+..++..+...|.++||++||.|++|+.+.++..+.-++-.+...
T Consensus 206 ~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~~~ 285 (1284)
T 3g5u_A 206 RGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLGI 285 (1284)
T ss_dssp TTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98999999999999999999999999999999999999999999999997879999846539999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999998987--9999999999988199877758999999999999999999999999999999999999971
Q 000511 492 TRKYLDAWCVFFWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFL 569 (1455)
Q Consensus 492 ~~~~~~~~~~~~~~~~~--~~~~~~tf~~~~~~~~~L~~~~~Ft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~RI~~fL 569 (1455)
+.....+....+..... ..+..++++.+.+..+.++++.+++.+..+.....|+..+...+..+.++.++.+|+.+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l 365 (1284)
T 3g5u_A 286 KKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKII 365 (1284)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999929988999999999999999999999999999999999999999997
Q ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCEECEEEECCCCEEEEECCCCCCHHHH
Q ss_conf 89988624431029998545788667889844999812686047886333654000014741996999996899847899
Q 000511 570 GCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSL 649 (1455)
Q Consensus 570 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~L~~isl~i~~G~l~~IvG~vGsGKSTL 649 (1455)
+.++..+........+ ......++++|++|+|+.+.+.++ |+|+||++++|+.++|+||+|||||||
T Consensus 366 ~~~~~~~~~~~~~~~~----------~~~~g~i~~~~v~~~y~~~~~~~v---L~~isl~i~~G~~~~ivG~sGsGKSTl 432 (1284)
T 3g5u_A 366 DNKPSIDSFSKSGHKP----------DNIQGNLEFKNIHFSYPSRKEVQI---LKGLNLKVKSGQTVALVGNSGCGKSTT 432 (1284)
T ss_dssp SCCCCCSSCCSSCCCC----------TTCCCCEEEEEEEECCSSTTSCCS---EEEEEEEECTTCEEEEECCSSSSHHHH
T ss_pred CCCCCCCCCCCCCCCC----------CCCCCEEEEEEEEEECCCCCCCCC---EECCEEEECCCCEEEEECCCCCCHHHH
T ss_conf 2898677666567777----------777771899998997699998710---125458975998899989999979999
Q ss_pred HHHHHCCCCCCCCEEEECC-------------CEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHCCHHHHHHC
Q ss_conf 9998648668870899709-------------1999848887888688888535999-9978999999982322878403
Q 000511 650 LNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLM 715 (1455)
Q Consensus 650 L~allGe~~~~~G~v~~~g-------------~iayv~Q~pwL~n~TIreNIlfg~~-~d~~~Y~~vi~ac~L~~Dl~~l 715 (1455)
+++|+|++++.+|+|.++| .++||+|+||++++||||||.+|.+ .+++++.++++.|++.++++.+
T Consensus 433 ~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l 512 (1284)
T 3g5u_A 433 VQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKL 512 (1284)
T ss_dssp HHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHS
T ss_pred HHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHC
T ss_conf 99980788999738999999877579999986548986887537766999974579899999999999982969999746
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 69975302579776660899999999988139998887178532019999999999421846689659998268310101
Q 000511 716 VGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA 795 (1455)
Q Consensus 716 p~GD~T~iGe~G~~LSGGQkqRIaLARAlY~~~~i~lLDD~~SaLD~~t~~~I~~~~i~g~ll~~kTvIlvTh~~~~l~~ 795 (1455)
|+|++|.+||+|.+|||||||||+||||+|++|+|++||||+|+||+++++.+.+. +.. +.+++|+|++||+++.+..
T Consensus 513 ~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~-l~~-~~~~~t~i~itH~l~~i~~ 590 (1284)
T 3g5u_A 513 PHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAA-LDK-AREGRTTIVIAHRLSTVRN 590 (1284)
T ss_dssp TTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHH-HHH-HHTTSEEEEECSCHHHHTT
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH-HHH-HCCCCEEEEEECCHHHHHC
T ss_conf 56334501478786599999999999999529998999798777799999999999-999-7399989999407789974
Q ss_pred CCEEEEEECCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHH--HH----HHCC---CCC-CHHHHHH---HHCCCC-CC
Q ss_conf 898999939869994297788740036765554321012333--22----1001---234-1134542---100234-67
Q 000511 796 ADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQ--KQ----EMRT---NAS-SANKQIL---LQEKDV-VS 861 (1455)
Q Consensus 796 aD~Ii~l~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~--~~----~~~~---~~~-~~~~~~~---~~~~~~-~~ 861 (1455)
||+|++|++|+++++|+++++....+.+.+............ .. .... ... ....... ...... ..
T Consensus 591 ~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (1284)
T 3g5u_A 591 ADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSICG 670 (1284)
T ss_dssp CSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC--------------------------------------------
T ss_pred CCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99899998999999788999986787799999974300221113333332222234433333333200034543334456
Q ss_pred CCCCHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----CCCHH
Q ss_conf 7840466778988850--74015778988631448999999999999999984134443321024578788----76503
Q 000511 862 VSDDAQEIIEVEQRKE--GRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQT----KYSTS 935 (1455)
Q Consensus 862 ~~~~~~~~~~~e~~~~--g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~----~~~~~ 935 (1455)
..+.......++..+. ....+..+..|.+.. |..+.+.+++.++.........+++..|.+......+ .....
T Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 749 (1284)
T 3g5u_A 671 PHDQDRKLSTKEALDEDVPPASFWRILKLNSTE-WPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSN 749 (1284)
T ss_dssp -------------CCCCCSCCCTTHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHH
T ss_pred CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 422332110245553136625899999984515-7999999999999999999999999999999855685033677999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 6899999999999999999999999999999999999999988448643324--67822699999702643100026999
Q 000511 936 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFD--QTPGGRILNRFSSDLYMIDDSLPFIL 1013 (1455)
Q Consensus 936 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~il~~p~~ff~--~~~~G~ilnRfs~D~~~id~~l~~~l 1013 (1455)
.|..+|++++++..++.+++.+.+.+.+.+...++|.+++++++++|++||+ .+++|+++||+++|+..++..++..+
T Consensus 750 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l 829 (1284)
T 3g5u_A 750 LFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRL 829 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998399888757899889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHC
Q ss_conf 9999999877786646987878---9999999999999999999999999999999873051476798731464898752
Q 000511 1014 NILLANFVGLLGIAVVLSYVQV---FFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAF 1090 (1455)
Q Consensus 1014 ~~~~~~~~~~i~~~~~i~~~~~---~~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf 1090 (1455)
..++..++.+++.++++.+..| .++++.+|+.+++.+++..+.+..... .....+....++.|+++|+.+||+|
T Consensus 830 ~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~e~l~gi~ti~a~ 906 (1284)
T 3g5u_A 830 AVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALK---DKKELEGSGKIATEAIENFRTVVSL 906 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHTTCTTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999969999999999999999999999999999999---9999999999999999889999984
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 92899999999999999999999999999999999999999999999999975058777776319999999999999999
Q 000511 1091 KSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVS 1170 (1455)
Q Consensus 1091 ~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~ 1170 (1455)
++|+.+.+++.+..+...+..... ..|.+....+...+.....+....++.. ....+..+.+.+...+.+......
T Consensus 907 ~~e~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~-lv~~~~~~~~~~~~~~~~~~~~~~ 982 (1284)
T 3g5u_A 907 TREQKFETMYAQSLQIPYRNAMKK---AHVFGITFSFTQAMMYFSYAAAFRFGAY-LVTQQLMTFENVLLVFSAIVFGAM 982 (1284)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCSSSCSCSTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 659999999999999999999999---9999999999999999999999999999-999098069999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEEECCCEE
Q ss_conf 9999999999999998999999974037721102678999999988418999899996699-885202235997589299
Q 000511 1171 LLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQV 1249 (1455)
Q Consensus 1171 ~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~Gekv 1249 (1455)
++..+...+.++.....+.+|+.++.+.+++.........+.++..|.|+|+||+++|+.. ..++|+|+||+|++||++
T Consensus 983 ~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v 1062 (1284)
T 3g5u_A 983 AVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTL 1062 (1284)
T ss_dssp HHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEE
T ss_conf 99999999999999999999999998388766665556654567778579999899779999870020305997699889
Q ss_pred EEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC---CCCHHHHH
Q ss_conf 998899971999999983378899766999897389999587714638980777777775888428599---99927799
Q 000511 1250 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDLKIW 1326 (1455)
Q Consensus 1250 gIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIReNLdp~~---~~sd~ei~ 1326 (1455)
||||+||||||||+++|+|+++|++|+|.+||+|++.++++.+|+++++|||||.+|++|||||+.++. ..++++++
T Consensus 1063 ~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~ 1142 (1284)
T 3g5u_A 1063 ALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIV 1142 (1284)
T ss_dssp EEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHH
T ss_pred EEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHH
T ss_conf 99889999789999999468678997798999980007899997026898778740666699997466877899999999
Q ss_pred HHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCE
Q ss_conf 999990099999968--994154169999993699999999988259988998565769899989999999998259947
Q 000511 1327 SVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMT 1404 (1455)
Q Consensus 1327 ~aL~~~~L~~~i~~l--gLdt~i~e~G~~LS~GQrQll~LARAlL~~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~T 1404 (1455)
+++++++++++++.+ |+||.++|+|.+||||||||+|||||++++|+|||||||||+||.++++.|++.|++..+++|
T Consensus 1143 ~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~t 1222 (1284)
T 3g5u_A 1143 RAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRT 1222 (1284)
T ss_dssp HHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 99998395999972704245611788893389999999999999749999998687555799999999999998679998
Q ss_pred EEEECCCHHHHHHHCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHC
Q ss_conf 99862681467410879899398598967945885029948999998508
Q 000511 1405 VITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1454 (1455)
Q Consensus 1405 vI~IaHRl~ti~~~D~I~vld~GrivE~g~p~eLl~~~~s~f~~l~~~~~ 1454 (1455)
+|+||||++++.+||||+||++|+++|.|+|++|++++ +.|++|++.+.
T Consensus 1223 vi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~~-g~y~~l~~~q~ 1271 (1284)
T 3g5u_A 1223 CIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQK-GIYFSMVSVQA 1271 (1284)
T ss_dssp EEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHSC-SHHHHHHHHHC
T ss_pred EEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCC-CHHHHHHHHHH
T ss_conf 99995587999809989999899899977899998477-77999999976
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=758.61 Aligned_cols=513 Identities=19% Similarity=0.244 Sum_probs=437.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 68999999999999999999999999999999999999999884486433246782269999970264310002699999
Q 000511 936 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNI 1015 (1455)
Q Consensus 936 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~ 1015 (1455)
.+...+++++++..++.++..+++.+.+.+...+++.++++++++.|++|||++++|+++||+++|++.+.+.+...+..
T Consensus 137 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 137 NVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999997889899879984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHH
Q ss_conf 99999877786646987878999999999999999999999999999999987305147679873146489875292899
Q 000511 1016 LLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDY 1095 (1455)
Q Consensus 1016 ~~~~~~~~i~~~~~i~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~ 1095 (1455)
++..++.+++.++++.+..|.+.++.+..+.++..+..++.+..+...+......+...+++.|+++|+++||+|++|+.
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 296 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRY 296 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999983999998214299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999997505877777631999999999999999999999
Q 000511 1096 FMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNF 1175 (1455)
Q Consensus 1096 ~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l 1175 (1455)
+.+++.+..+...+..........+......++..+...++..+... ....+.+++|.+..++.+...+..++..+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~v~~g~lt~g~~~~~~~~~~~~~~~l~~~ 372 (1321)
T 4f4c_A 297 ELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVG----WVHDGSLNFGDMLTTFSSVMMGSMALGLA 372 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHTTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999----99959986999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECC
Q ss_conf 99999999998999999974037721102678999999988418999899996699-88520223599758929999889
Q 000511 1176 LSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGR 1254 (1455)
Q Consensus 1176 i~~~~~~e~~~~sv~Ri~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGr 1254 (1455)
...+..+.....+.+|+.++.+.+++............+.+|.|+|+||+|+|+.. ..++|+|+||+|+|||++||||+
T Consensus 373 ~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~ 452 (1321)
T 4f4c_A 373 GPQLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGS 452 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEEC
T ss_conf 99999999999999999999717853456665565677888767999855407999987433331886228827899805
Q ss_pred CCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCCC-CCHHHHHHHHHHHC
Q ss_conf 99719999999833788997669998973899995877146389807777777758884285999-99277999999900
Q 000511 1255 TGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCH 1333 (1455)
Q Consensus 1255 TGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIReNLdp~~~-~sd~ei~~aL~~~~ 1333 (1455)
||||||||+++|+|+|+|++|+|.+||+|+++++++++|++++||||||++|+|||||||..+.+ .+|+++++|++.++
T Consensus 453 sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~ 532 (1321)
T 4f4c_A 453 SGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMAN 532 (1321)
T ss_dssp SSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 89857788887545651644861579965011259998504666587533207861678864155220999999998756
Q ss_pred HHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 99999968--9941541699999936999999999882599889985657698999899999999982599479986268
Q 000511 1334 VKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHR 1411 (1455)
Q Consensus 1334 L~~~i~~l--gLdt~i~e~G~~LS~GQrQll~LARAlL~~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHR 1411 (1455)
++++++.+ |+||.+||+|.+||||||||+|||||++++|+|+|||||||+||++||+.+++.|++..+++|+|+||||
T Consensus 533 l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHr 612 (1321)
T 4f4c_A 533 AEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHR 612 (1321)
T ss_dssp CHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSC
T ss_pred CHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 54688708888860755898877777879999999872599989984554468878999999999998479889997363
Q ss_pred HHHHHHHCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHH
Q ss_conf 146741087989939859896794588502994899999850
Q 000511 1412 ISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1412 l~ti~~~D~I~vld~GrivE~g~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
++++.+||+|+||++|+|+|.|+|+||+++ ++.|++|++.+
T Consensus 613 ls~i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q 653 (1321)
T 4f4c_A 613 LSTIRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQ 653 (1321)
T ss_dssp TTTTTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHH
T ss_pred HHHHHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHH
T ss_conf 878986898999639965136899999985-32799999962
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=721.33 Aligned_cols=511 Identities=21% Similarity=0.260 Sum_probs=432.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 36899999999999999999999999999999999999999988448643324678226999997026431000269999
Q 000511 935 SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILN 1014 (1455)
Q Consensus 935 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~ 1014 (1455)
..|.+.|++++++..++.+++.+++.+.+.+...++|.++++++++.|++|||++++|+++||+++|++.+++.++..+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~ 187 (1284)
T 3g5u_A 108 TTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIG 187 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999869989975688778999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHH
Q ss_conf 99999987778664698787899999999999999999999999999999998730514767987314648987529289
Q 000511 1015 ILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSED 1094 (1455)
Q Consensus 1015 ~~~~~~~~~i~~~~~i~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~ 1094 (1455)
.++..++.+++.++++.+..|.+.++++.+..++..+..++.+..+...+...++.+++.+++.|+++|+.+||+|++|+
T Consensus 188 ~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~ 267 (1284)
T 3g5u_A 188 MFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQK 267 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999997879999846539
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999---999999750587777763199999999999999999
Q 000511 1095 YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISF---IATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSL 1171 (1455)
Q Consensus 1095 ~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~ 1171 (1455)
.+.+++.+..+...+..........+......++..+...+ .+...+. .+..+.|.+..++.+......+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-------~g~~~~g~~~~~~~~~~~~~~~ 340 (1284)
T 3g5u_A 268 KELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVI-------SKEYSIGQVLTVFFSVLIGAFS 340 (1284)
T ss_dssp SHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HSSSCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999999999999-------2998899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEE
Q ss_conf 999999999999998999999974037721102678999999988418999899996699-8852022359975892999
Q 000511 1172 LGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVG 1250 (1455)
Q Consensus 1172 l~~li~~~~~~e~~~~sv~Ri~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~Gekvg 1250 (1455)
+..+...+..++....+++|+.++.+.+++............+.+|.|+|+||+|+|+.+ ..++|+|+||+|+|||++|
T Consensus 341 ~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ 420 (1284)
T 3g5u_A 341 VGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVA 420 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEE
T ss_conf 99999999999999999999999972898677666567777777771899998997699998710125458975998899
Q ss_pred EECCCCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCCC-CCHHHHHHHH
Q ss_conf 988999719999999833788997669998973899995877146389807777777758884285999-9927799999
Q 000511 1251 IVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVL 1329 (1455)
Q Consensus 1251 IvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIReNLdp~~~-~sd~ei~~aL 1329 (1455)
|||+||||||||+++|.|+++|++|+|.+||+|+++++++++|+++++|||||++|++|||||+.++.+ .+++++++++
T Consensus 421 ivG~sGsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~ 500 (1284)
T 3g5u_A 421 LVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAV 500 (1284)
T ss_dssp EECCSSSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH
T ss_conf 98999997999999980788999738999999877579999986548986887537766999974579899999999999
Q ss_pred HHHCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 990099999968--994154169999993699999999988259988998565769899989999999998259947998
Q 000511 1330 EKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVIT 1407 (1455)
Q Consensus 1330 ~~~~L~~~i~~l--gLdt~i~e~G~~LS~GQrQll~LARAlL~~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~ 1407 (1455)
+.++++++++.+ |+||.++|+|.+||||||||+|||||++++|+|||||||||+||++|++.+++.++...+++|+|+
T Consensus 501 ~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~ 580 (1284)
T 3g5u_A 501 KEANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIV 580 (1284)
T ss_dssp HHTTCHHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 98296999974656334501478786599999999999999529998999798777799999999999999739998999
Q ss_pred ECCCHHHHHHHCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHH
Q ss_conf 6268146741087989939859896794588502994899999850
Q 000511 1408 IAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1408 IaHRl~ti~~~D~I~vld~GrivE~g~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
||||++++.+||+|+||++|+++|.|+|++|++++ +.|++++..+
T Consensus 581 itH~l~~i~~~d~i~vl~~G~i~~~g~~~~l~~~~-~~~~~~~~~~ 625 (1284)
T 3g5u_A 581 IAHRLSTVRNADVIAGFDGGVIVEQGNHDELMREK-GIYFKLVMTQ 625 (1284)
T ss_dssp ECSCHHHHTTCSEEEECSSSCCCCEECHHHHHHTT-SHHHHHHHHT
T ss_pred EECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCC-CHHHHHHHHH
T ss_conf 94077899749989999899999978899998678-7799999974
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=689.82 Aligned_cols=561 Identities=25% Similarity=0.350 Sum_probs=467.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78988631448999999999999999984134443321024578788765036899999999999999999999999999
Q 000511 884 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 963 (1455)
Q Consensus 884 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 963 (1455)
..+.|++...+... ..+++.++..+.....+++++.+++.............++.+++++.++..++.+++.+.....+
T Consensus 27 ~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (598)
T 3qf4_B 27 RLLGYLRPHTFTLI-MVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLS 105 (598)
T ss_dssp HHGGGTGGGHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999-99999999999999999999999999973688899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999998844864332467822699999702643100026999999999987778664698787899999999
Q 000511 964 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1043 (1455)
Q Consensus 964 ~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~p 1043 (1455)
.+...++|..+++++++.|+.||+++++|+++||+++|++.+++.+...+..++..++.+++.++++.+..|+++++.+.
T Consensus 106 ~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~ 185 (598)
T 3qf4_B 106 QDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLS 185 (598)
T ss_dssp HHHHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999977999997688889999999999999999999999999999999999999999998999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999873051476798731464898752928999999999999999999999999999999
Q 000511 1044 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1123 (1455)
Q Consensus 1044 l~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~ 1123 (1455)
...++..+..++.+..++..+...+..+++.+++.|+++|+.+||+|++|+.+.+++.+..+...+..........+...
T Consensus 186 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (598)
T 3qf4_B 186 IVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPP 265 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999997379999974870999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999975058777776319999999999999999999999999999999899999997403772110
Q 000511 1124 RLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEEL 1203 (1455)
Q Consensus 1124 ~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~E~~ 1203 (1455)
..+++..+...++..+.... ...+.++.|.+..++.++..+..++..+...+.+++....+++|+.++.+.++|..
T Consensus 266 ~~~~~~~~~~~~~~~~g~~l----~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 341 (598)
T 3qf4_B 266 LMNMVNNLGFALISGFGGWL----ALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKD 341 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----GGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999----98599789999999999999999999999999999999999999999976887777
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEE
Q ss_conf 26789999999884189998999966998852022359975892999988999719999999833788997669998973
Q 000511 1204 CGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN 1283 (1455)
Q Consensus 1204 ~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~d 1283 (1455)
.. ...+.++..|.|+++||+++|+++ .++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.|
T Consensus 342 ~~--~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~ 418 (598)
T 3qf4_B 342 DP--DAVELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGID 418 (598)
T ss_dssp CS--SCCCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEE
T ss_pred CC--CCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEE
T ss_conf 77--777777777718999989977999-860122279986998899989999969999999945857998089999998
Q ss_pred CCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCCC-CCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHHHH
Q ss_conf 899995877146389807777777758884285999-9927799999990099999968--9941541699999936999
Q 000511 1284 IINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQ 1360 (1455)
Q Consensus 1284 i~~i~~~~lR~~i~~IpQdp~lf~gTIReNLdp~~~-~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G~~LS~GQrQ 1360 (1455)
+.+++.+++|+++++|||||.+|++|+|||+.++.. .++++++++++.+++.++++.+ |+|+.++++|.+|||||||
T Consensus 419 i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Q 498 (598)
T 3qf4_B 419 IRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQ 498 (598)
T ss_dssp GGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHH
T ss_pred HHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHH
T ss_conf 30188999984108990798232463999974479999999999999996978889746453236422788987999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCEEEEEECCEEEEECCHHHHHC
Q ss_conf 99999988259988998565769899989999999998259947998626814674108798993985989679458850
Q 000511 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQ 1440 (1455)
Q Consensus 1361 ll~LARAlL~~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHRl~ti~~~D~I~vld~GrivE~g~p~eLl~ 1440 (1455)
|+|||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+|+||++
T Consensus 499 rv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 578 (598)
T 3qf4_B 499 LLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQ 578 (598)
T ss_dssp HHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHH
T ss_conf 99999999649999999897667999999999999999808998999942778997199899998999998778999986
Q ss_pred CCCCHHHHHHHHH
Q ss_conf 2994899999850
Q 000511 1441 DECSVFSSFVRAS 1453 (1455)
Q Consensus 1441 ~~~s~f~~l~~~~ 1453 (1455)
++ +.|+++++..
T Consensus 579 ~~-~~~~~~~~~~ 590 (598)
T 3qf4_B 579 KR-GFYYELFTSQ 590 (598)
T ss_dssp TT-CHHHHHHHHH
T ss_pred CC-CHHHHHHHHH
T ss_conf 78-7799999997
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=687.05 Aligned_cols=569 Identities=21% Similarity=0.280 Sum_probs=451.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 07401577898863144899999999999999998413444332102457878876503689999999999999999999
Q 000511 877 EGRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRA 956 (1455)
Q Consensus 877 ~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~ 956 (1455)
.|...++.++.|++...+.... .+++.++..++....+++++++++.............+...++++.++..++..+..
T Consensus 6 ~g~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (587)
T 3qf4_A 6 GGGGGSKTLARYLKPYWIFAVL-APLFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCT 84 (587)
T ss_dssp --CCCCCCGGGGTGGGHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9853499999999999999999-999999999999999999999999987369879999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999884486433246782269999970264310002699999999998777866469878789
Q 000511 957 FSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVF 1036 (1455)
Q Consensus 957 ~~~~~~~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~ 1036 (1455)
+...+.+.+...++|..+++++++.|+.||+++++|+++||+++|++.+++.+...+..++...+.+++.++++.+..|.
T Consensus 85 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 164 (587)
T 3qf4_A 85 VFASYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVK 164 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997889799765888999999999999999999999999999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999987305147679873146489875292899999999999999999999999
Q 000511 1037 FLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1116 (1455)
Q Consensus 1037 ~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~ 1116 (1455)
+.++++....++..+..++.+..+...+...+..+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+.......
T Consensus 165 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 244 (587)
T 3qf4_A 165 LSSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFS 244 (587)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999855999998621499999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999-99750587777763199999999999999999999999999999998999999974
Q 000511 1117 ASLWLSLRLQLLAAFIISFIATM-AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY 1195 (1455)
Q Consensus 1117 ~~~wl~~~l~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~ 1195 (1455)
...+......++..+...++... .... ..+.++.|.+..++.+...+..++..+...+..+.....+.+|+.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~vl~~g~~~v-----~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~ 319 (587)
T 3qf4_A 245 LIVFALPLFIFIVNMGMIAVLWFGGVLV-----RNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEV 319 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999-----84993899999999999999999999999999999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 03772110267899999998841899989999669988520223599758929999889997199999998337889976
Q 000511 1196 MDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1275 (1455)
Q Consensus 1196 ~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G 1275 (1455)
.+.+++..... .+.+.++..|.|+++||+++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|
T Consensus 320 l~~~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G 398 (587)
T 3qf4_A 320 LNEKPAIEEAD-NALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERG 398 (587)
T ss_dssp HHCCCSCCCCT-TCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEE
T ss_pred HCCCCCCCCCC-CCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 76897657887-76566888880799788998489997642111799869988999899999799999999278669986
Q ss_pred EEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCCC-CCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCC
Q ss_conf 69998973899995877146389807777777758884285999-9927799999990099999968--99415416999
Q 000511 1276 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1352 (1455)
Q Consensus 1276 ~I~IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIReNLdp~~~-~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G~ 1352 (1455)
+|.+||+|+++++.+++|+++++|||+|.+|++|+|||+.++.. .++++++++++.+++.++++.+ |+|+.+++.|.
T Consensus 399 ~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~ 478 (587)
T 3qf4_A 399 RVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGR 478 (587)
T ss_dssp EEEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSC
T ss_pred EEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCC
T ss_conf 79899998340789999841389778986767559999852488999999999999968499997565312127518989
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCEEEEEECCEEEEE
Q ss_conf 99936999999999882599889985657698999899999999982599479986268146741087989939859896
Q 000511 1353 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1432 (1455)
Q Consensus 1353 ~LS~GQrQll~LARAlL~~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHRl~ti~~~D~I~vld~GrivE~ 1432 (1455)
+||||||||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.
T Consensus 479 ~LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~ 558 (587)
T 3qf4_A 479 NFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGF 558 (587)
T ss_dssp SSCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEE
T ss_conf 92999999999999997299999997975447999999999999986799989998227688981998999989989997
Q ss_pred CCHHHHHCCCCCHHHHHHHHH
Q ss_conf 794588502994899999850
Q 000511 1433 GNPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1433 g~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
|+|+||++++ +.|+++++..
T Consensus 559 g~~~el~~~~-~~~~~~~~~~ 578 (587)
T 3qf4_A 559 GTHKELLEHC-KPYREIYESQ 578 (587)
T ss_dssp ECHHHHHHHC-HHHHHHHHHH
T ss_pred CCHHHHHHCC-CHHHHHHHHH
T ss_conf 8899998678-3999999998
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=668.61 Aligned_cols=561 Identities=22% Similarity=0.341 Sum_probs=442.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCH-----HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89886314489999999999999999841344433210245787887--650-----36899999999999999999999
Q 000511 885 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTK--YST-----SFYLVVLCIFCMFNSFLTLVRAF 957 (1455)
Q Consensus 885 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~--~~~-----~~~l~~~~~l~~~~~~~~~~~~~ 957 (1455)
++.|++...+.....+ ++.++........++.+++.++........ ... ..+...+.++.++..++.+...+
T Consensus 5 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (578)
T 4a82_A 5 YLQFVKPYKYRIFATI-IVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQY 83 (578)
T ss_dssp HHHHHGGGHHHHHHHH-HHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999889999999999-999999999999999999999999816871146778888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998844864332467822699999702643100026999999999987778664698787899
Q 000511 958 SFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFF 1037 (1455)
Q Consensus 958 ~~~~~~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~ 1037 (1455)
...+.+.+...+++.++++++++.|++||+++++|+++||+++|++.+++.+...+..++...+..++.++++.+..|++
T Consensus 84 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 163 (578)
T 4a82_A 84 LAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKL 163 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999987899997689869999999999999999999999999999999999999999996999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999873051476798731464898752928999999999999999999999999
Q 000511 1038 LLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTA 1117 (1455)
Q Consensus 1038 ~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~ 1117 (1455)
.++.+....++..+..++.+..++..+...+..+++.+++.|+++|+.+||+|++|+.+.+++.+..+...+........
T Consensus 164 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (578)
T 4a82_A 164 TLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRW 243 (578)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998249999981664999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999---999999975058777776319999999999999999999999999999999899999997
Q 000511 1118 SLWLSLRLQLLAAFIIS---FIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLE 1194 (1455)
Q Consensus 1118 ~~wl~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~ 1194 (1455)
..+.....+.+..+... ..+...+. .+..+.|.+..++.+...+..++..+...+.++.....+.+|+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~v~~~g~~~v~-------~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~ 316 (578)
T 4a82_A 244 NAYSFAAINTVTDIGPIIVIGVGAYLAI-------SGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQ 316 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999998-------599589999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 40377211026789999999884189998999966998852022359975892999988999719999999833788997
Q 000511 1195 YMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG 1274 (1455)
Q Consensus 1195 ~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~ 1274 (1455)
+.+.++|..... .+.+.++..|.|+++||+++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++
T Consensus 317 ~l~~~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~ 395 (578)
T 4a82_A 317 LIDEDYDIKNGV-GAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395 (578)
T ss_dssp HHTCCCSSCCCT-TCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSE
T ss_pred HHCCCCCCCCCC-CCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
T ss_conf 976897666787-7666677788079999999758999741343379987999999989999859999999846788999
Q ss_pred CEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCC
Q ss_conf 66999897389999587714638980777777775888428599-99927799999990099999968--9941541699
Q 000511 1275 GQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESG 1351 (1455)
Q Consensus 1275 G~I~IDG~di~~i~~~~lR~~i~~IpQdp~lf~gTIReNLdp~~-~~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G 1351 (1455)
|+|.+||.|+++++.+++|++++++||+|.+|++|+|||+..+. ..++++++++++.+++.++++.+ |+|+.++++|
T Consensus 396 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g 475 (578)
T 4a82_A 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERG 475 (578)
T ss_dssp EEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGG
T ss_pred CEEEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCC
T ss_conf 67999999844278999960068992898347645999985279998899999999880959999757330102530688
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCEEEEEECCEEEE
Q ss_conf 99993699999999988259988998565769899989999999998259947998626814674108798993985989
Q 000511 1352 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVE 1431 (1455)
Q Consensus 1352 ~~LS~GQrQll~LARAlL~~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHRl~ti~~~D~I~vld~GrivE 1431 (1455)
.+||||||||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|
T Consensus 476 ~~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~ 555 (578)
T 4a82_A 476 VKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555 (578)
T ss_dssp TTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEE
T ss_conf 96799999999999999749999999786545799999999999999808997999831789997199899998998999
Q ss_pred ECCHHHHHCCCCCHHHHHHHHHCC
Q ss_conf 679458850299489999985089
Q 000511 1432 QGNPQTLLQDECSVFSSFVRASTM 1455 (1455)
Q Consensus 1432 ~g~p~eLl~~~~s~f~~l~~~~~~ 1455 (1455)
.|+|+||++++ +.|+++++.+++
T Consensus 556 ~g~~~el~~~~-~~~~~~~~~q~~ 578 (578)
T 4a82_A 556 TGTHRELIAKQ-GAYEHLYSIQNL 578 (578)
T ss_dssp EECHHHHHHTT-SHHHHHHTTTTC
T ss_pred ECCHHHHHHCC-CHHHHHHHHHCC
T ss_conf 88899998588-389999985069
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=667.65 Aligned_cols=560 Identities=23% Similarity=0.315 Sum_probs=464.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7898863144899999999999999998413444332102457878876503689-999999999999999999999999
Q 000511 884 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYL-VVLCIFCMFNSFLTLVRAFSFAFG 962 (1455)
Q Consensus 884 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l-~~~~~l~~~~~~~~~~~~~~~~~~ 962 (1455)
.+..|++...+.... .+++.++........+++++++++..... .......++ ..++++.++..++.+.+.+.....
T Consensus 15 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (582)
T 3b60_A 15 RLWPTIAPFKAGLIV-AGIALILNAASDTFMLSLLKPLLDDGFGK-TDRSVLLWMPLVVIGLMILRGITSYISSYCISWV 92 (582)
T ss_dssp HHHHHHGGGHHHHHH-HHHHHHHHHHHHHHHHHHHTHHHHSSTTS-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999-99999999999999999999999988436-8657999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999884486433246782269999970264310002699999999998777866469878789999999
Q 000511 963 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1042 (1455)
Q Consensus 963 ~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~ 1042 (1455)
+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++..++.+++.++++.+..|+++++.+
T Consensus 93 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l 172 (582)
T 3b60_A 93 SGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILV 172 (582)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998099999788986589999998799999999999999999999999999999998099999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999987305147679873146489875292899999999999999999999999999999
Q 000511 1043 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1122 (1455)
Q Consensus 1043 pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~ 1122 (1455)
....++..+..++.+..++..+...+..+++.+++.|+++|+.+||+|++|+.+.+++.+..+...+........+.|..
T Consensus 173 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3b60_A 173 VLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISD 252 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999961999998376899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999999999999997505877777631999999999999999999999999999999989999999740377211
Q 000511 1123 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1202 (1455)
Q Consensus 1123 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~E~ 1202 (1455)
...+++..+...++..+.. . ....+.++.|.+..++.++..+..++..+...+.+++....+++|+.++.+.++|.
T Consensus 253 ~~~~~~~~~~~~~~~~~g~---~-~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~ 328 (582)
T 3b60_A 253 PIIQLIASLALAFVLYAAS---F-PSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEK 328 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHH---S-SSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHH---H-HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999999999999999999---9-99849998999999999999999999999999999999999999999997599876
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 02678999999988418999899996699885202235997589299998899971999999983378899766999897
Q 000511 1203 LCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL 1282 (1455)
Q Consensus 1203 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~ 1282 (1455)
... +.+.++..+.|+++||+++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.
T Consensus 329 ~~~---~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b60_A 329 DEG---KRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGH 405 (582)
T ss_dssp CCC---CBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTE
T ss_pred CCC---CCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCE
T ss_conf 677---77777888847999889973999974415615997699989998999998999999986106898976979999
Q ss_pred ECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHH
Q ss_conf 389999587714638980777777775888428599--99927799999990099999968--99415416999999369
Q 000511 1283 NIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1358 (1455)
Q Consensus 1283 di~~i~~~~lR~~i~~IpQdp~lf~gTIReNLdp~~--~~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G~~LS~GQ 1358 (1455)
|+++++.+++|++++++||+|.+|++|+|||+..+. ..++++++++++.+++.++++.+ |+|+.+++.|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq 485 (582)
T 3b60_A 406 DLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQ 485 (582)
T ss_dssp ETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHH
T ss_pred ECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 82306999999608088068747787899998545999989999999999849799998450411451147988789999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999882599889985657698999899999999982599479986268146741087989939859896794588
Q 000511 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1359 rQll~LARAlL~~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHRl~ti~~~D~I~vld~GrivE~g~p~eL 1438 (1455)
|||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+|+||++++..||+|++|++|+++|.|+|++|
T Consensus 486 ~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b60_A 486 RQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSEL 565 (582)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997289989997865557989999999999999679979999454778985998999978889884589999
Q ss_pred HCCCCCHHHHHHHHH
Q ss_conf 502994899999850
Q 000511 1439 LQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1439 l~~~~s~f~~l~~~~ 1453 (1455)
++++ +.|+++++.+
T Consensus 566 ~~~~-~~~~~~~~~q 579 (582)
T 3b60_A 566 LAQH-GVYAQLHKMQ 579 (582)
T ss_dssp HHHT-SSHHHHHHHT
T ss_pred HHCC-CHHHHHHHHH
T ss_conf 8769-8899999975
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=664.74 Aligned_cols=560 Identities=23% Similarity=0.333 Sum_probs=462.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78988631448999999999999999984134443321024578788765036899-99999999999999999999999
Q 000511 884 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLV-VLCIFCMFNSFLTLVRAFSFAFG 962 (1455)
Q Consensus 884 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~-~~~~l~~~~~~~~~~~~~~~~~~ 962 (1455)
.++.|++...+.... .+++.++........+++++++++..... .......++. .++++.++..++.....+.....
T Consensus 15 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (582)
T 3b5x_A 15 RLWTYIRLYKAGLVV-STIALVINAAADTYMISLLKPLLDEGFGN-AESNFLRILPFMILGLMFVRGLSGFASSYCLSWV 92 (582)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998899999999-99999999999999999999999998646-8667999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999884486433246782269999970264310002699999999998777866469878789999999
Q 000511 963 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1042 (1455)
Q Consensus 963 ~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~ 1042 (1455)
+.+...+++.++++++++.|+.||+++++|++++|+++|++.+++.+...+..++..++.+++.++++.+..|+++++.+
T Consensus 93 ~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l 172 (582)
T 3b5x_A 93 SGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLI 172 (582)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998699999778987899999998899999999999999999999999999999998299999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999987305147679873146489875292899999999999999999999999999999
Q 000511 1043 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1122 (1455)
Q Consensus 1043 pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~ 1122 (1455)
....++..+..++.+..++..+...+..+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+........+.|..
T Consensus 173 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3b5x_A 173 VVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIAD 252 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999951999997087599999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999999999999997505877777631999999999999999999999999999999989999999740377211
Q 000511 1123 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1202 (1455)
Q Consensus 1123 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~E~ 1202 (1455)
...+++..+...++....... ...+.++.|.+..++.++..+..++..+...+.+++....+++|+.++.+.++|.
T Consensus 253 ~~~~~~~~~~~~~i~~~g~~~----v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~ 328 (582)
T 3b5x_A 253 PVIQMIASLALFAVLFLASVD----SIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETER 328 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999999999999----9859988999999999999999999999999999999999999999997589767
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 02678999999988418999899996699885202235997589299998899971999999983378899766999897
Q 000511 1203 LCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL 1282 (1455)
Q Consensus 1203 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~ 1282 (1455)
... +.+.++..|.|+++||+++|+++.+++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.
T Consensus 329 ~~~---~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b5x_A 329 DNG---KYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGH 405 (582)
T ss_pred CCC---CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf 777---77777788828999989972899865400416998799989998999997999999996577899987989999
Q ss_pred ECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCCCCHHH
Q ss_conf 389999587714638980777777775888428599--99927799999990099999968--99415416999999369
Q 000511 1283 NIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1358 (1455)
Q Consensus 1283 di~~i~~~~lR~~i~~IpQdp~lf~gTIReNLdp~~--~~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G~~LS~GQ 1358 (1455)
|+.+++.+++|++++++||+|.+|++|++||+..+. ..++++++++++.+++.++++.+ |+|+.++++|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq 485 (582)
T 3b5x_A 406 DVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQ 485 (582)
T ss_pred EHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHH
T ss_conf 85638899996485898279905310299998566889999999999999879899998476533451068888479999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999882599889985657698999899999999982599479986268146741087989939859896794588
Q 000511 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTL 1438 (1455)
Q Consensus 1359 rQll~LARAlL~~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHRl~ti~~~D~I~vld~GrivE~g~p~eL 1438 (1455)
|||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 486 ~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b5x_A 486 RQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADL 565 (582)
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997499999997854468999999999999997289989999368899981998999989989997789999
Q ss_pred HCCCCCHHHHHHHHH
Q ss_conf 502994899999850
Q 000511 1439 LQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1439 l~~~~s~f~~l~~~~ 1453 (1455)
++++ +.|+++++.+
T Consensus 566 ~~~~-~~~~~~~~~q 579 (582)
T 3b5x_A 566 LAQD-GAYAQLHRIQ 579 (582)
T ss_pred HHCC-CHHHHHHHHH
T ss_conf 8488-5899999986
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=656.22 Aligned_cols=563 Identities=23% Similarity=0.274 Sum_probs=448.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8988631448999999999999999984134443321024578788-76--50368999999999999999999999999
Q 000511 885 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQT-KY--STSFYLVVLCIFCMFNSFLTLVRAFSFAF 961 (1455)
Q Consensus 885 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~~--~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 961 (1455)
+..|++...+..... +++.++........+++++++++....... .. ....+...++++.++..++.+.+.+....
T Consensus 10 l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (595)
T 2yl4_A 10 LLGLAYPERRRLAAA-VGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQT 88 (595)
T ss_dssp HHHHHGGGHHHHHHH-HHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999988789999999-9999999999999999999999999735740266799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999988448643324678226999997026431000269999999999877786646987878999999
Q 000511 962 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1041 (1455)
Q Consensus 962 ~~~~~~~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~ 1041 (1455)
.+.+...+++.++++++++.|++||+++++|+++||+++|++.++..+...+..++..++..++.++++.+..|++++++
T Consensus 89 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~ 168 (595)
T 2yl4_A 89 SGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFV 168 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999819999977798488999999999999999999999999999999999999999819999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998730514767987314648987529289999999999999999999999999999
Q 000511 1042 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1121 (1455)
Q Consensus 1042 ~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1121 (1455)
+....++..+...+.+..+...+...+..+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+..........|.
T Consensus 169 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (595)
T 2yl4_A 169 LSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGF 248 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999981199999837569999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999999999999999750587777763199999999999999999999999999999998999999974037721
Q 000511 1122 SLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQE 1201 (1455)
Q Consensus 1122 ~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~E 1201 (1455)
....+++..+...++........ ..+.++.|.+..++.++..+..++..+...+.++.....+++|+.++.+.++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~g~~~v----~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 324 (595)
T 2yl4_A 249 FGATGLSGNLIVLSVLYKGGLLM----GSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPK 324 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH----HTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999----86997899999999999999999999999999999999999999999838976
Q ss_pred CCCCCCCCCCCCCCCCC-EEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 10267899999998841-8999899996699-885202235997589299998899971999999983378899766999
Q 000511 1202 ELCGYQSLSPDWPFQGL-IEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV 1279 (1455)
Q Consensus 1202 ~~~~~~~~~~~wp~~g~-I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~I 1279 (1455)
.......+ +..+..|. |+++||+++|+++ ..++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+
T Consensus 325 ~~~~~~~~-~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~ 403 (595)
T 2yl4_A 325 LPFNEGVI-LNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISL 403 (595)
T ss_dssp SCSSCSBC-CCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEE
T ss_pred CCCCCCCC-CCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 67777877-77678998389998899858998881201127998499889998999997999999982585789837999
Q ss_pred CCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHCCCCCC----CCHHHHHHHHHHHCHHHHHHHC--CCCHHHHCCCCC
Q ss_conf 8973899995877146389807777777758884285999----9927799999990099999968--994154169999
Q 000511 1280 DGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGIS 1353 (1455)
Q Consensus 1280 DG~di~~i~~~~lR~~i~~IpQdp~lf~gTIReNLdp~~~----~sd~ei~~aL~~~~L~~~i~~l--gLdt~i~e~G~~ 1353 (1455)
||.|+.+++.+.+|+++++|||+|.+|++|++||+..+.. .++++++++++.+++.++++.+ |+|+.++++|.+
T Consensus 404 ~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~ 483 (595)
T 2yl4_A 404 DGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVL 483 (595)
T ss_dssp TTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCC
T ss_pred CCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99981117999997322898368832687799998405877665689999999998697999974732013501688786
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCEEEEEECCEEEEEC
Q ss_conf 99369999999998825998899856576989998999999999825994799862681467410879899398598967
Q 000511 1354 FSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQG 1433 (1455)
Q Consensus 1354 LS~GQrQll~LARAlL~~~~ILiLDEaTS~lD~~Te~~i~~~i~~~f~~~TvI~IaHRl~ti~~~D~I~vld~GrivE~g 1433 (1455)
||||||||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|
T Consensus 484 LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 563 (595)
T 2yl4_A 484 LSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYG 563 (595)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 89999999999999975999999988666899899999999999996599799994687899759989999899899978
Q ss_pred CHHHHHCCCCCHHHHHHHHH
Q ss_conf 94588502994899999850
Q 000511 1434 NPQTLLQDECSVFSSFVRAS 1453 (1455)
Q Consensus 1434 ~p~eLl~~~~s~f~~l~~~~ 1453 (1455)
+|++|++++++.|+++++.+
T Consensus 564 ~~~~l~~~~~~~~~~~~~~q 583 (595)
T 2yl4_A 564 KHEELLSKPNGIYRKLMNKQ 583 (595)
T ss_dssp CSCC------C---------
T ss_pred CHHHHHHCCCHHHHHHHHHH
T ss_conf 89999747872999999974
Done!