BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000515
(1450 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WUU9|MCM3A_MOUSE 80 kDa MCM3-associated protein OS=Mus musculus GN=Mcm3ap PE=2 SV=2
Length = 1971
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 177/317 (55%), Gaps = 23/317 (7%)
Query: 251 LEASSVIIGSCPDMCPESERAERERKGDLDRYERLDGDRNQTNEYLAVKKYNRT-AEREA 309
L+ + +G+CPDMCPE ER RE + L +E + G +Q + AVK+Y+R+ A++E
Sbjct: 620 LDKARAFVGTCPDMCPEKERYLRETRSQLSVFEVVPGT-DQVDHAAAVKEYSRSSADQEE 678
Query: 310 NL---IRPMPILQKTVGYLLDLLDQPYDERFLGLYNFLWDRMRAIRMDLRMQHIFNQEAI 366
L +RP +L +T+ YL+ + + Y+F+W+R R IR D+ QH+ + +
Sbjct: 679 PLPHELRPSAVLSRTMDYLVTQIMDQKEGSLRDWYDFVWNRTRGIRKDITQQHLCDPLTV 738
Query: 367 TMLEQMIRLHIIAMHELCEYTKGEGFSEGFDAHLNIEQMNKTSVELFQMYDDHRKRGLII 426
+++E+ R HI H +CE E S FDA +N E M K L +MY D R +G+
Sbjct: 739 SLIEKCTRFHIHCAHFMCE----EPMS-SFDAKINNENMTKCLQSLKEMYQDLRNKGVFC 793
Query: 427 STEKEFRGYYALLKLDKHPGYKVEPAELSLDLAKMTPEIRQTPEVLFARSVARACRTGNF 486
++E EF+GY LL L+K ++ ++ + P++R +PEV FA A + NF
Sbjct: 794 ASEAEFQGYNVLLNLNK--------GDILREVQQFHPDVRNSPEVNFAVQAFAALNSNNF 845
Query: 487 IAFFRLARKASYLQACLMHAHFSKLRTQALASL---YS-GLQNNQGLPVAHVGRWLGMEE 542
+ FF+L + ASYL ACL+H +F+++R AL +L Y+ Q + P+ V R L +
Sbjct: 846 VRFFKLVQSASYLNACLLHCYFNQIRKDALRALNVAYTVSTQRSTVFPLDGVVRMLLFRD 905
Query: 543 -EDIESLLEYHGFSIKE 558
E+ + L YHG ++ +
Sbjct: 906 SEEATNFLNYHGLTVAD 922
>sp|O60318|MCM3A_HUMAN 80 kDa MCM3-associated protein OS=Homo sapiens GN=MCM3AP PE=1 SV=2
Length = 1980
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 195/379 (51%), Gaps = 26/379 (6%)
Query: 251 LEASSVIIGSCPDMCPESERAERERKGDLDRYERLDGDRNQTNEYLAVKKYNRT-AEREA 309
L+ + +G+C DMCPE ER RE + L +E + G +Q + AVK+Y+R+ A++E
Sbjct: 627 LDKARTFVGTCLDMCPEKERYMRETRSQLSVFEVVPGT-DQVDHAAAVKEYSRSSADQEE 685
Query: 310 NL---IRPMPILQKTVGYLLDLLDQPYDERFLGLYNFLWDRMRAIRMDLRMQHIFNQEAI 366
L +RP+P+L +T+ YL+ + + Y+F+W+R R IR D+ QH+ + +
Sbjct: 686 PLPHELRPLPVLSRTMDYLVTQIMDQKEGSLRDWYDFVWNRTRGIRKDITQQHLCDPLTV 745
Query: 367 TMLEQMIRLHIIAMHELCEYTKGEGFSEGFDAHLNIEQMNKTSVELFQMYDDHRKRGLII 426
+++E+ R HI H +CE E S FDA +N E M K L +MY D R +G+
Sbjct: 746 SLIEKCTRFHIHCAHFMCE----EPMS-SFDAKINNENMTKCLQSLKEMYQDLRNKGVFC 800
Query: 427 STEKEFRGYYALLKLDKHPGYKVEPAELSLDLAKMTPEIRQTPEVLFARSVARACRTGNF 486
++E EF+GY LL L+K ++ ++ + P +R + EV FA A + NF
Sbjct: 801 ASEAEFQGYNVLLSLNK--------GDILREVQQFHPAVRNSSEVKFAVQAFAALNSNNF 852
Query: 487 IAFFRLARKASYLQACLMHAHFSKLRTQALASL---YS-GLQNNQGLPVAHVGRWLGMEE 542
+ FF+L + ASYL ACL+H +FS++R AL +L Y+ Q + P+ V R L +
Sbjct: 853 VRFFKLVQSASYLNACLLHCYFSQIRKDALRALNFAYTVSTQRSTIFPLDGVVRMLLFRD 912
Query: 543 -EDIESLLEYHGFSIKEFEEPYMVKEGPFLNSDKDYPTKCSKLVLLKRSGRMVEDMSASS 601
E+ L HG ++ + + FL + T+ S + K + + E ++
Sbjct: 913 CEEATDFLTCHGLTVS--DGCVELNRSAFLEPEGLSKTRKSVFITRKLTVSVGEIVNGGP 970
Query: 602 -PVTPPAEPTKAMQLDNKY 619
P P P + NKY
Sbjct: 971 LPPVPRHTPVCSFNSQNKY 989
>sp|O74889|SAC31_SCHPO SAC3 family protein 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC576.05 PE=1 SV=1
Length = 1024
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 183/371 (49%), Gaps = 36/371 (9%)
Query: 213 SNSGRGQSVVERQKFVGGHSI-ESAKDYPNENTLSDN----EGLEASSVIIGSCPDMCPE 267
S R S +E +F S+ E ++ +N L D+ L+ + +G+CPDMCPE
Sbjct: 55 SRQKRFSSTLEGNRFEELRSLREKEREVAIQNGLIDDPTKPRQLDEAVTFVGTCPDMCPE 114
Query: 268 SERAERERKGDLDRYERLDGDRNQTNEYLAVKKYNR-TAEREANL---IRPMPILQKTVG 323
ER +RE + +L+R+E ++ + + ++ LAVK ++R A E L +RP P+L+K++
Sbjct: 115 YEREQREYQNNLERWE-INPETGRVDKNLAVKAFHRPAAGNEQALPSDVRPPPVLKKSLD 173
Query: 324 YLLDLLDQPYDERFLGLYNFLWDRMRAIRMDLRMQHIFNQEAITMLEQMIRLHIIAMHEL 383
YL+D + D + F+ DR R+IR D +Q+ + +A+ E++ R HI+ +H+L
Sbjct: 174 YLVDKIVCGPDP-LENTHFFVRDRTRSIRQDFTLQNCRDLDAVACHERIARYHILCIHQL 232
Query: 384 CEYTKGEGFSEGFDAHLNIEQMNKTSVE-LFQMYDDHRKRGLIISTEKEFRGYYALLKL- 441
CE + F A +EQ+ K ++ L + YDD RK + E EFR Y + L
Sbjct: 233 CE-------KKQFSAQQEVEQLRKGILQSLCEFYDDLRKVKIRCPNEPEFRSYAIITHLR 285
Query: 442 --DKHPGYKVEPAE--------LSLDLAKMTPEIRQTPEVLFARSVARACRTGNFIAFFR 491
D ++ P E L+L L+ + + + + R+ AC + FF+
Sbjct: 286 DPDVVRQSQILPIEIFDDQRVQLALRLSALAQKNNERVGHILPRN-TEAC-PNLYTRFFK 343
Query: 492 LARK--ASYLQACLMHAHFSKLRTQALASLYSGLQN-NQGLPVAHVGRWLGMEE-EDIES 547
L + +YL ACL+ +HF +R AL ++ + + P + R L + E S
Sbjct: 344 LVQSPAVTYLMACLLESHFMSIRKGALKAMRKAFMSAHANFPCGDLKRILHFDTVEQAAS 403
Query: 548 LLEYHGFSIKE 558
Y+G + +
Sbjct: 404 FSRYYGLEVSD 414
>sp|Q9U3V9|XMAS2_DROME Protein xmas-2 OS=Drosophila melanogaster GN=xmas-2 PE=1 SV=3
Length = 1370
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 154/322 (47%), Gaps = 30/322 (9%)
Query: 254 SSVIIGSCPDMCPESERAERERKGDLDRYERLDGDRNQTNEYLAVKKYNRT-AEREANL- 311
S G C DMCPE ER RE + + YE G A+K+Y+R+ A++E L
Sbjct: 195 SGATQGHCADMCPEKERVLREFQRQVAYYELQPGSDELICHERALKQYSRSSADQETPLP 254
Query: 312 --IRPMPILQKTVGYLL----DLLDQPYDERFLG-LYNFLWDRMRAIRMDLRMQHIFNQE 364
+R L T+ YL+ D+ ++ + +G ++F+WDR R+IR ++ Q + +
Sbjct: 255 HELRNETALHMTMSYLMHEIMDISERQDPQSHMGDWFHFVWDRTRSIRKEITQQELCSLG 314
Query: 365 AITMLEQMIRLHIIAMHELCEYTKGEGFSEGFDAHLNIEQMNKTSVELFQMYDDHRKRGL 424
A+ ++EQ R HI C + FD+ +N E + K L MY D R +G+
Sbjct: 315 AVKLVEQCARFHI-----HCAARLVDADPSVFDSKINAENLTKCLQTLKYMYHDLRIKGV 369
Query: 425 IISTEKEFRGYYALLKLDKHPGYKVEPAELSLDLAKMTPEIRQTPEVLFARSVARACRTG 484
E EFRGY LL L A D+ ++ E++ PEV A A +
Sbjct: 370 PCPKEAEFRGYIVLLNLAD--------ANFLWDIGQLPAELQSCPEVRQAIQFYLALQDT 421
Query: 485 NFIAFFRLA--RKASYLQACLMHAHFSKLRTQALASLYSGLQNNQ-----GLPVAHVGRW 537
NF+ FF+L + SYL AC++ +F++LR L L ++ + LP++++
Sbjct: 422 NFVRFFQLLADKDTSYLSACILVNYFTRLRVLGLHRLIQAYRSPRKDEVSSLPLSYIAEL 481
Query: 538 LGM-EEEDIESLLEYHGFSIKE 558
L E++ ++++G I E
Sbjct: 482 LSFASEQEAADFVQHYGLQINE 503
>sp|Q9USI4|SAC32_SCHPO SAC3 family protein 2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC70.06 PE=3 SV=1
Length = 458
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 156/343 (45%), Gaps = 39/343 (11%)
Query: 252 EASSVIIGSCPDMCPESERAERERKGDLDRYERLDGDRNQTNEYLAVKKYNRTAEREANL 311
E SSV++G+C MCPE E ER+ + + YE LD Q + LAVK Y+R A + +
Sbjct: 65 EKSSVLVGTCRQMCPEFELEERKLQHAIHPYE-LDPVSKQAHPSLAVKAYHRPAAGKGPI 123
Query: 312 ----IRPMPILQKTVGYLLDLLDQPYDERFLGLYNFLWDRMRAIRMDLRMQHIFNQEAIT 367
+RP IL+ T+ YL ++ Y R + F+ DR RA+R D +Q F+Q+++
Sbjct: 124 LPSDVRPPSILKNTIDYLFKVILDRYSLR--EAHAFVRDRTRAVRQDFSVQSSFSQDSVY 181
Query: 368 MLEQMIRLHIIAMHELCEYTKGEGFSEGFDAHLNIEQMNKTSVELF---QMYDDHRKRGL 424
E + R HII++HEL + F IEQ++K+ L+ Q+YD R
Sbjct: 182 CHELIARFHIISLHEL-------AHTPNFSRQQEIEQLSKSMEILYTLGQLYDYMHLRKE 234
Query: 425 IISTEKEFRGYYALLKL-DKHPG----------YKVEPAELSLDLAKM------TPEIRQ 467
+ E EFR Y LL L D G +K + SL L + T
Sbjct: 235 HCTHEAEFRAYMVLLSLGDPSVGLDTLSWPDFVFKKPIVKTSLKLYSLAQRNNHTITTSN 294
Query: 468 TPEVLFARSVARACRTGNFIAFFRLAR--KASYLQACLMHAHFSKLRTQALASLYSG-LQ 524
+ + S + + FF++A + SYL CL+ +RT AL ++ L
Sbjct: 295 SISLSLVSSFNTEATSNLYTRFFKIASSFRVSYLMGCLLDLFVPSIRTGALKAMKKCYLS 354
Query: 525 NNQGLPVAHVGRWLGMEEED-IESLLEYHGFSIKEF-EEPYMV 565
+ +P + + L ED + + HG I+ E+P V
Sbjct: 355 AHSNIPFKDLMKILAATSEDELVQCCKMHGLKIEYIGEQPSAV 397
>sp|P46674|SAC3_YEAST Nuclear mRNA export protein SAC3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SAC3 PE=1 SV=2
Length = 1301
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 156/343 (45%), Gaps = 46/343 (13%)
Query: 208 TDQKVSNSGRGQSVVERQKFVGGHSIESAKDYPNENTLSDNEGLEASSVIIGSCPDMCPE 267
T +K+ N+ R S++E + V +SAKD L + V G+C DMCP
Sbjct: 163 TLKKMRNTER--SIMEEKGLVD--KADSAKD------------LYDAIVFQGTCLDMCPT 206
Query: 268 SERAERERKGDLDRYERLDGDRNQTNEYLAVKKYNRTAEREANL----IRPMPILQKTVG 323
ER+ R + + YE+ + + + A+K + R A A +RP IL KT+
Sbjct: 207 FERSRRNVEYTVYSYEKNQPNDKKASRTKALKVFARPAAAAAPPLPSDVRPPHILVKTLD 266
Query: 324 YLLD--LLDQPYDERFLGLYNFLWDRMRAIRMDLRMQHIFNQEAITMLEQMIRLHIIAMH 381
Y++D L P E FLWDRMR+IR D Q+ EA+ E+++R+H++ +H
Sbjct: 267 YIVDNLLTTLPESE------GFLWDRMRSIRQDFTYQNYSGPEAVDCNERIVRIHLLILH 320
Query: 382 ELCEYTKGEGFSEGFDAHLNIEQMNKTSVELFQMYDDHRKRGLIISTEKEFRGYYALLKL 441
+ + + F +EQ++K+ + L ++YDD R G E EFR YALL
Sbjct: 321 IMVKS------NVEFSLQQELEQLHKSLITLSEIYDDVRSSGGTCPNEAEFRA-YALLSK 373
Query: 442 DKHPGYKVE----PAELSLD-LAKMTPEIRQ--TPEVLFARSVARACRTGNFIA-FFRLA 493
+ P Y P + D L +M R+ + R + NF A FF+L
Sbjct: 374 IRDPQYDENIQRLPKHIFQDKLVQMALCFRRVISNSAYTERGFVKTENCLNFYARFFQLM 433
Query: 494 RKAS--YLQACLMHAHFSKLRTQALASLYSGLQNNQGLPVAHV 534
+ S L + H + +R AL +L L N + P+ +
Sbjct: 434 QSPSLPLLMGFFLQMHLTDIRFYALRALSHTL-NKKHKPIPFI 475
>sp|A6NKF1|SAC31_HUMAN SAC3 domain-containing protein 1 OS=Homo sapiens GN=SAC3D1 PE=1
SV=2
Length = 404
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 95/352 (26%), Positives = 158/352 (44%), Gaps = 30/352 (8%)
Query: 258 IGSCPDMCPESERAERERKGDLDRYERLDGDRN---QTNEYLAVKKYNRTAERE----AN 310
+G+CPDMCP +ERA+RER+ L R E + G R + + AVK+Y+R A + +
Sbjct: 54 VGTCPDMCPAAERAQREREHRLHRLEVVPGCRQDPPRADPQRAVKEYSRPAAGKPRPPPS 113
Query: 311 LIRPMPILQKTVGYLLDLLDQPYDERFLGLYNFLWDRMRAIRMDLRMQHIFNQEAITMLE 370
+RP +L TV YL + + D + +F+ DR+RA+ +DL +Q + EA +LE
Sbjct: 114 QLRPPSVLLATVRYLAGEVAESADIARAEVASFVADRLRAVLLDLALQGAGDAEAAVVLE 173
Query: 371 QMIRLHIIAMHELCEYTKGEGFSEG-FDAHLNIEQMNKTSVELFQMYDDHRKRGL-IIST 428
+ + + L G + G D L Q+ + L + Y RG
Sbjct: 174 AALATLLTVVARL-----GPDAARGPADPVLLQAQVQEGFGSLRRCY----ARGAGPHPR 224
Query: 429 EKEFRGYYALLKLDKHPGYKVEPAELSLDLAKMTPEIRQTPEVLFARSVARACRTGNFIA 488
+ F+G + L Y + E ++ ++ +R P + A +V A R GN
Sbjct: 225 QPAFQGLFLL--------YNLGSVEALHEVLQLPAALRACPPLRKALAVDAAFREGNAAR 276
Query: 489 FFRLARKASYLQACLMHAHFSKLRTQALASLYSGLQNNQG--LPVAHVGRWLGMEE-EDI 545
FRL + YL +C + H R +ALA +G LP+ + L ++ +
Sbjct: 277 LFRLLQTLPYLPSCAVQCHVGHARREALARFARAFSTPKGQTLPLGFMVNLLALDGLREA 336
Query: 546 ESLLEYHGFSIKEFEEPYMVKEGPFLNSDKDYPTKCSKLVLLKRSGRMVEDM 597
L + HG + + EE + G ++ + C LV K GR +E++
Sbjct: 337 RDLCQAHGLPL-DGEERVVFLRGRYVEEGLPPASTCKVLVESKLRGRTLEEV 387
>sp|A6H687|SAC31_MOUSE SAC3 domain-containing protein 1 OS=Mus musculus GN=Sac3d1 PE=1
SV=1
Length = 427
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 94/362 (25%), Positives = 156/362 (43%), Gaps = 36/362 (9%)
Query: 208 TDQKVSNSGRGQSVVERQKFVGGHSIESAKDYPNENTLSDNEGLEASSVIIGSCPDMCPE 267
T +V S Q V R ++ G S+ P + + +G CPDMCP
Sbjct: 39 TGARVCPSSPQQDAVPRFRWPGDAECASSTHTPT---------MSGCKLPMGLCPDMCPA 89
Query: 268 SERAERERKGDLDRYERLDGDRN---QTNEYLAVKKYNRTAEREANLIRPMPILQK---- 320
+ERA RER+ L R E G R + + VK+Y+R A + +
Sbjct: 90 AERARRERERRLHRLEVEPGGRGNAPRADPKRTVKEYSRPAAGKPRPPPSLLRPPPVLLA 149
Query: 321 TVGYLLDLLDQPYDERFLGLYNFLWDRMRAIRMDLRMQHIFNQEAITMLEQMIRLHIIAM 380
TV YL + D + +F+ DR+RA+R+DL +Q + + +A T+LE + + +
Sbjct: 150 TVRYLAGEVAGRGDVSCAEVASFVADRLRAVRLDLSLQGVDDADAATVLEAALATLLAVV 209
Query: 381 HEL-CEYTKGEGFSEGFDAHLNIEQMNKTSVELFQMYDDHRKRGLIISTEKEFRGYYALL 439
+ E T+G D L Q+ + L + Y R +G + F+G + L
Sbjct: 210 ARVRPEETRGAA-----DPVLLQTQVQEGFGSLRRCY--ARGKG-PYPRQAAFQGLFLL- 260
Query: 440 KLDKHPGYKVEPAELSLDLAKMTPEIRQTPEVLFARSVARACRTGNFIAFFRLARKASYL 499
Y + E ++ ++ +R P + A +V A R N FRL R YL
Sbjct: 261 -------YNLGSVEALQEVLQLPAALRACPPLQAALAVDAAFREDNHARLFRLLRTLPYL 313
Query: 500 QACLMHAHFSKLRTQALASLYSGLQNNQG--LPVAHVGRWLGMEE-EDIESLLEYHGFSI 556
Q+C + H R +ALA L L +G LP+ + +L ++ ++ L + HG ++
Sbjct: 314 QSCAVQEHIGYARRKALARLSRALSTPKGQTLPLDFIEHFLALDGLQEARDLCQAHGLTL 373
Query: 557 KE 558
+
Sbjct: 374 DK 375
>sp|Q32NW2|LENG8_XENLA Leukocyte receptor cluster member 8 homolog OS=Xenopus laevis
GN=leng8 PE=2 SV=1
Length = 800
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 114/273 (41%), Gaps = 44/273 (16%)
Query: 278 DLDRYERLDGDRNQTNEYLAVKKYNRTAEREANLIRPMPILQKTVGYLLDLLDQPYDERF 337
D D + + ++ T YL + T + + +RP+P+L+K++ + D
Sbjct: 544 DWDEIKIVGNSQDITKHYLRL-----TCAPDPSTVRPVPVLKKSLTMVKADFKNKQD--- 595
Query: 338 LGLYNFLWDRMRAIRMDLRMQHIFNQEAITMLEQMIRLHIIAMHELCEYTKGEGFSEGFD 397
Y F ++M++IR DL +Q I + + + E R+ + KG+
Sbjct: 596 ---YVFACEQMKSIRQDLTVQGIRTEFTVEVYETHARIAL---------EKGD------- 636
Query: 398 AHLNIEQMNKTSVELFQMYDDHRKRGLIISTEKEFRGYYALLKLDKHPGYKVEPAELSLD 457
E+ N+ +L +Y ++ + EF Y L + + +L+ +
Sbjct: 637 ----HEEFNQCQAQLKSLYAEN-----LAGNVGEFTAYRILYYI-----FTKNSGDLTTE 682
Query: 458 LAKMTPEIRQTPEVLFARSVARACRTGNFIAFFRLARKASYLQACLMHAHFSKLRTQALA 517
LA +T E++ V A S+ A N+ FF+L R+A + L+ + R AL
Sbjct: 683 LAHLTKELKADACVAHALSLREAWALSNYHRFFKLYRQAPRMSGYLIDKFAERERKAALK 742
Query: 518 SLYSGLQNNQGLPVAHVGRWLGM-EEEDIESLL 549
++ + LPV+ V L EE+ +S L
Sbjct: 743 AMIKTFR--PLLPVSFVQSELAFANEEECQSFL 773
>sp|A4QNR8|LENG8_DANRE Leukocyte receptor cluster member 8 homolog OS=Danio rerio GN=leng8
PE=2 SV=1
Length = 839
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 37/223 (16%)
Query: 298 VKKYNR-TAEREANLIRPMPILQKTVGYLLDLLDQPYDERFLGLYNFLWDRMRAIRMDLR 356
K Y R T + + +RP+P+L+K++ + D Y + ++M++IR DL
Sbjct: 597 TKNYLRLTCAPDPSTVRPVPVLRKSLIAVKAHWKSNQD------YVYACEQMKSIRQDLT 650
Query: 357 MQHIFNQEAITMLEQMIRLHIIAMHELCEYTKGEGFSEGFDAHLNIEQMNKTSVELFQMY 416
+Q + + + E R+ + KG+ H E+ N+ +L +Y
Sbjct: 651 VQGVRTDFTVEVYETHARIAL---------EKGD--------H---EEFNQCQTQLKALY 690
Query: 417 DDHRKRGLIISTEKEFRGYYALLKLDKHPGYKVEPAELSLDLAKMTPEIRQTPEVLFARS 476
D + EF Y + + + +L+ +L +T E+R P V A
Sbjct: 691 KDCPSDNV-----GEFTAYRLIYYI-----FTKNSGDLTTELVYLTTELRADPCVAHALE 740
Query: 477 VARACRTGNFIAFFRLARKASYLQACLMHAHFSKLRTQALASL 519
+ A GNF FFRL +KA + A L+ + R AL ++
Sbjct: 741 LRTAWALGNFHRFFRLYQKAPRMAAYLIDKFVERERNIALRAI 783
>sp|Q96PV6|LENG8_HUMAN Leukocyte receptor cluster member 8 OS=Homo sapiens GN=LENG8 PE=2
SV=2
Length = 779
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 130/342 (38%), Gaps = 99/342 (28%)
Query: 178 DAEREMQAKAKRLARFKVELSENVQISPEITDQKVSNSGRGQSVVERQKFVGGHSIESAK 237
D ERE++ K KR ARF+ S +++ P + S+ES+
Sbjct: 465 DPERELK-KQKRAARFQHGHSRRLRLEPLVLQMS--------------------SLESSG 503
Query: 238 DYPNENTLSDNEGLEASSVIIGSCPDMCPESERAERERKGDLDRYERLDGDRNQTNEYLA 297
P+ L I+G+CPD+ T YL
Sbjct: 504 ADPDWQELQ----------IVGTCPDI---------------------------TKHYLR 526
Query: 298 VKKYNRTAEREANLIRPMPILQKTVGYLLDLLDQPYDERFLGLYNFLWDRMRAIRMDLRM 357
+ T + + +RP+ +L+K++ + + D Y F ++M++IR DL +
Sbjct: 527 L-----TCAPDPSTVRPVAVLKKSLCMVKCHWKEKQD------YAFACEQMKSIRQDLTV 575
Query: 358 QHIFNQEAITMLEQMIRLHIIAMHELCEYTKGEGFSEGFDAHLNIEQMNKTSVELFQMYD 417
Q I + + + E R+ + KG+ E+ N+ +L +Y
Sbjct: 576 QGIRTEFTVEVYETHARIAL---------EKGD-----------HEEFNQCQTQLKSLYA 615
Query: 418 DHRKRGLIISTEKEFRGYYALLKLDKHPGYKVEPAELSLDLAKMTPEIRQTPEVLFARSV 477
++ + EF Y L + + +++ +LA +T E++ P V A ++
Sbjct: 616 EN-----LPGNVGEFTAYRILYYI-----FTKNSGDITTELAYLTRELKADPCVAHALAL 665
Query: 478 ARACRTGNFIAFFRLARKASYLQACLMHAHFSKLRTQALASL 519
A GN+ FFRL A + L+ + R AL ++
Sbjct: 666 RTAWALGNYHRFFRLYCHAPCMSGYLVDKFADRERKVALKAM 707
>sp|Q8CBY3|LENG8_MOUSE Leukocyte receptor cluster member 8 homolog OS=Mus musculus
GN=Leng8 PE=1 SV=1
Length = 785
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 133/342 (38%), Gaps = 99/342 (28%)
Query: 178 DAEREMQAKAKRLARFKVELSENVQISPEITDQKVSNSGRGQSVVERQKFVGGHSIESAK 237
D ERE++ K KR ARF+ S +++ P + ++SN +ES+
Sbjct: 503 DPERELK-KQKRAARFQHGHSRRLRLEPLVL--QMSN------------------LESSG 541
Query: 238 DYPNENTLSDNEGLEASSVIIGSCPDMCPESERAERERKGDLDRYERLDGDRNQTNEYLA 297
P+ L I+G+CPD+ T YL
Sbjct: 542 ADPDWQELQ----------IVGTCPDI---------------------------TKHYLR 564
Query: 298 VKKYNRTAEREANLIRPMPILQKTVGYLLDLLDQPYDERFLGLYNFLWDRMRAIRMDLRM 357
+ T + + +RP+ +L+K++ + + D Y F ++M++IR DL +
Sbjct: 565 L-----TCAPDPSTVRPVAVLKKSLCMVKSHWKEKQD------YAFACEQMKSIRQDLTV 613
Query: 358 QHIFNQEAITMLEQMIRLHIIAMHELCEYTKGEGFSEGFDAHLNIEQMNKTSVELFQMYD 417
Q I + + + E R+ + KG + E+ N+ +L +Y
Sbjct: 614 QGIRTEFTVEVYETHARIAL---------EKG-----------DHEEFNQCQTQLKSLYA 653
Query: 418 DHRKRGLIISTEKEFRGYYALLKLDKHPGYKVEPAELSLDLAKMTPEIRQTPEVLFARSV 477
++ + EF Y L + + +++ +LA +T E++ P V A ++
Sbjct: 654 EN-----LAGNVGEFTAYRILYYI-----FTKNSGDITTELAYLTREMKADPCVAHALAL 703
Query: 478 ARACRTGNFIAFFRLARKASYLQACLMHAHFSKLRTQALASL 519
A GN+ FFRL A + L+ + R AL ++
Sbjct: 704 RAAWALGNYHRFFRLYCHAPCMSGYLVDKFADRERKAALKAM 745
>sp|Q1MTP1|THP3_SCHPO THP3 homolog C2A9.11c OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC2A9.11c PE=3 SV=1
Length = 395
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 37/219 (16%)
Query: 299 KKYNR-TAEREANLIRPMPILQKTVGYLLDLLDQPYDERFLGLYNFLWDRMRAIRMDLRM 357
K+Y R T+ + + +RP+P+L++T+ L + + Y ++ D+ +++R DL +
Sbjct: 141 KRYLRLTSAPDPDTVRPLPVLKQTLELLKKKWKEEKN------YAYICDQFKSLRQDLTV 194
Query: 358 QHIFNQEAITMLEQMIRLHIIAMHELCEYTKGEGFSEGFDAHLNIEQMNKTSVELFQMYD 417
Q I N+ ++ + E +H KG+ + + N+ +LF +Y
Sbjct: 195 QRIQNEFSVLVYE---------IHARIALEKGD-----------VGEYNQCQTQLFHLYS 234
Query: 418 DHRKRGLIISTEKEFRGYYALLKLDKHPGYKVEPAELSLDLAKMTPEIRQTPEVLFARSV 477
I KEF Y L L + +E++ LA + E + V A V
Sbjct: 235 FG-----IPGNTKEFLAYRILYML-----FTKNRSEMNSLLANLKEEDKTNAAVTHALEV 284
Query: 478 ARACRTGNFIAFFRLARKASYLQACLMHAHFSKLRTQAL 516
A TG++ FF L A + LM + R QA+
Sbjct: 285 RSAMATGDYYKFFHLYLVAPNMGGYLMDLFIERERVQAM 323
>sp|Q12049|THP3_YEAST Protein THP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=THP3 PE=1 SV=1
Length = 470
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 299 KKYNR-TAEREANLIRPMPILQKTVGYLLDLLDQPYDERFLGLYNFLWDRMRAIRMDLRM 357
K Y R T+E +LIRP ILQK L+D Y + Y +L D+ +++R DLR+
Sbjct: 198 KSYLRLTSEPNPDLIRPPNILQKMYCLLMD----KYQSK-TATYTYLCDQFKSMRQDLRV 252
Query: 358 QHIFNQEAITMLEQMIRLHI 377
Q I N I + + R+ +
Sbjct: 253 QMIENSFTIKVYQTHARIAL 272
>sp|A9KK83|MURG_CLOPH UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Clostridium phytofermentans (strain ATCC
700394 / DSM 18823 / ISDg) GN=murG PE=3 SV=1
Length = 355
Score = 35.8 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 11/61 (18%)
Query: 518 SLYSGLQNNQGLPVAHVGRWLGMEEEDIESL-LEYHGFS---------IKEFEEPYMVKE 567
+L +GL+ QG + ++G + G+E E IE L + YHG S IK F +P+ V +
Sbjct: 20 ALIAGLKE-QGYEIHYIGSYEGIERELIEKLGIPYHGISSGKLRRYLDIKNFSDPFKVLK 78
Query: 568 G 568
G
Sbjct: 79 G 79
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 530,277,712
Number of Sequences: 539616
Number of extensions: 22507034
Number of successful extensions: 60810
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 60668
Number of HSP's gapped (non-prelim): 164
length of query: 1450
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1320
effective length of database: 121,419,379
effective search space: 160273580280
effective search space used: 160273580280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)